LOCUS       DASDYK010000001       110852 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.001, whole genome shotgun sequence.
ACCESSION   DASDYK010000001 DASDYK010000000
VERSION     DASDYK010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 110852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 110852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..110852
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.001"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            179..1585
                     /locus_tag="U0308_000001"
     CDS             179..1585
                     /locus_tag="U0308_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEM2315019.1"
                     /translation="MDKLFLARFQFASTTIFHFLFVPLSIGLVFMVALMETLYVVKGK
                     EIYKKMSKFWGHIFLINFAVGVVTGIIQEFQFGMNWSDYSRFVGDVFGAPLAIEALLA
                     FFMESTFIGLWIFGWDKLGKKLHLACIWLVSIGTIMSSFWILAANSFMQHPVGFEFKN
                     GRAEMNDFLQLITNGQLLVEFPHVIFGAFATGAFFIAGVSAYKMLKKQDVAFFKRSFQ
                     IAMVMAVIGGFGVAFSGHSQAQYLVKTQPMKMAATEGIWEDTADPAPWTMIAKINPEE
                     KKNEWEVNVPYALSFLSYGTLTGSVEGMNTLQKQYEEKYGEGDYIPPVKTAFWSFRIM
                     VGAGMLMILFALIGIVLAWKKKLVNAKWYLRFMIPMIGFPFLANSMGWIMTEIGRQPW
                     VVFGYMKTADAVSPNVSSGQILFSIIAFSTIYTILAILLVYLFIREIKKGPDGHKPEK
                     AEISVDPFDKGDESFVTK"
     gene            1572..2585
                     /gene="cydB"
                     /locus_tag="U0308_000002"
     CDS             1572..2585
                     /gene="cydB"
                     /locus_tag="U0308_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEM2315020.1"
                     /translation="MSLNELWFLLIAILFIGFFFLEGFDFGVGMSTRFMARNALERRV
                     LVNTIGPFWDANEVWLLTAGGAIFAAFPNWYATMFSGYYIPLVFLLLALIGRGVSFEF
                     RGQKDSPLWIKTWDWVIFFGSILPPFLFGVLFASLIQGMPINSDMDMYAGFFDYITVF
                     SVWGGVTITLMCLLHGLLFITLRTEEDIQDRARRMAKRVWFITVPALVIFVVLAYFNT
                     DMFQVRPVLVPLMIGIVVVMYVLSALFIWKDRDILAFTFGGLGIVFTIATIFVSLFPR
                     VMISSINSAFDLTIENAASGQYSLSVMTIVAVTLLPFVLGYQIWSYYVFRKRVSSKEK
                     MTY"
     gene            2585..4309
                     /gene="cydD"
                     /locus_tag="U0308_000003"
     CDS             2585..4309
                     /gene="cydD"
                     /locus_tag="U0308_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol reductant ABC exporter subunit CydD"
                     /protein_id="HEM2315021.1"
                     /translation="MGKDLRNYKGIKKIMAILAVFTLVQGAAIIVMAITLARAITDLF
                     HEHAFQSVTIQIGLFAGAYFLRHFLNVWKKQIVYRYAAKLAKTMREELLDSLFALGPR
                     FARAEGTGKVVTMVMEGVADFRNYLELFLPKMMNMAIIPAMIWVYIAFQDWTSAFILM
                     ITLPILIVFMIILGLAAKKQADSQFETYRVLSNHFVDSLKGLETLRYLGLSHDHEGKI
                     ASVSSRYRKATMKTLRVAFMSSFALDFFTMLSIALVALFLGLGLIDGNMNLPIALSVL
                     ILAPEYFLPVREVGSDYHATLDGQEAGRVIQGIIDQAKAEKPETNALPLTTFAENTEF
                     SFENITVKHDVDAADSLHEASFTVKGFEKVGIIGATGAGKSTLIDVLSGFLTPTSGGF
                     RWNGESGASLASSDWQTQVTYIPQHPYLFHDTIAGNIRFYHPNSTDEEMKKAAESAGL
                     NKLVAGLEDGYETLVGEAGRMLSGGQEQRVALARAFLTDRPIVLMDEPTAHLDIETEY
                     ELKKPMLDLFENRLVFFATHRLHWMLEMDRIIVLDHGAVVETGTHEELLSRKGFYYNL
                     VKAQLEEV"
     gene            4309..6048
                     /gene="cydC"
                     /locus_tag="U0308_000004"
     CDS             4309..6048
                     /gene="cydC"
                     /locus_tag="U0308_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol reductant ABC exporter subunit CydC"
                     /protein_id="HEM2315022.1"
                     /translation="MRKSSWIIPYIKENRGLFLLVIFLGTLTFASAGALMFTSGHLIS
                     KSSLMPESIMAVYISTVGVRAFGIMRSVSRYVERLSSHSLVLRILEKMRVRLYRLLEP
                     QALLLKSRYKTGDILGLLAGDIEHLQNFYLTTMLPAIVSLVLYAGVVIALGAFSIPFA
                     ALFVLLIGLLVLVLPWVSLLYARGKNAYLKQGRNSLYQKFTDAVFGISDWKFSGREKT
                     FISNYEKDEADMLRTENKQFHFVNWRDFFSQLVVGFMVIVMVYWSTAESRDGAFSGTM
                     IAAFVLAIMALAEAFVPVSSAISDKSLYQDSLARLDKIEDPTLPTFEEETKEIERINT
                     ENVVLKAENLTFAYDEKSPEILNGFDFTLQQGEKVAIIGRSGTGKSTFLKLVQGALLP
                     TAGKVTMNGVEVENLRPQIPEITSMLNQKAHLFSTTVLNNIRLGNQDASDEEVYEAAK
                     KVQLHDFIMSMPDGYHTQMSEMGERFSGGERGRIALARILLQNTPIVILDEPTVGLDP
                     ITERDLLATIFETLADKSLIWVTHHLVGAEKMDRVLFLEEGKTLMEGPHAELMAEEPR
                     YKRLYQLDRPIEL"
     gene            6191..7138
                     /locus_tag="U0308_000005"
     CDS             6191..7138
                     /locus_tag="U0308_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2315023.1"
                     /translation="MKKFHGLVLTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTD
                     TTENIITEEKPEPAVPTKDTTVTTSQKSKVQTTIDITDSQEVYSYEQNSKIDLKDFTA
                     TLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDSEDGKTTAVKLNYLVKEKTAQL
                     TITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQI
                     TAYAFDESGNYSEEVTYQVPAKKQNEAVVTAPDKVKKIETKNAVKSATAKPADVAKVT
                     KDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK"
     gene            7181..8119
                     /locus_tag="U0308_000006"
     CDS             7181..8119
                     /locus_tag="U0308_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2315024.1"
                     /translation="MKKLLSGLIIVLMVSLLGHSFNAEAASYEKIIYDKAVNLKGVVN
                     QSKRNDGINSKMYKTSSSVKYLGSAKKYDKKTLIITREGKTARAKWYYCKLGNTTIGW
                     IDSRAFTNVGKPTIADTVPALWNSKKAIITTKPKNTTATTYFFQKNSAGNWYEVRHFT
                     SHIGKWGFDPKFSEKSSGTPVGVYRTGIAFGQKGNPGTKLTFRAITNRSYWISNSNDK
                     SYNTWQERNSSSSADEKMKIPQYKYGMEVKYNAKRVKGKGSAVFYHVDSPKYNYTLGC
                     VAQSEANTKEVLKFADKNTLIVLGEESRIKTFYGIN"
     gene            8232..9746
                     /locus_tag="U0308_000007"
     CDS             8232..9746
                     /locus_tag="U0308_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEM2315025.1"
                     /translation="MTSKPYIMGVDIGTSSTKAVLFNQRGEVIFRQATHYELITDETG
                     KAEESPTEIFEAVLSSIQAVMKNVNKEELAGISFSSAMHSLIMVGSNGELLTECITWA
                     DGRSSETLEKVKRDNYLFQLYEATGTPIHPMSPFAKICWLKEEKPTLFKRTEKFVDIK
                     SYILYRLFGVWVMDESLASGTGLYNIMEHDWEFEAMEIVKLTPDLLPKVVPETYQLTG
                     VKKEYAELMGIPENLPFIVGGSDGALANIGIQATGQNDVTITVGTSGAVRKLTNQFQI
                     DSRGRTFCYGAGDGYFIAGGAVNNGGKVVEWGLQQFGSEAEISRRDFASFIAKIEEVP
                     PGAAGLLFQPYLLGERAPFWTNDIRGGFVGLTINHTKAHFIRAILEGVAFNLAEVYEA
                     VSAPDDIIYVTGGISAHDGWCRLLADILNREIRVPHTIEGSSLGAAIIGMRSLGILKD
                     LNLKHTLPIKAVYHPSENVLKYAELRLIFKQVTTQLMSSYSQLNSWQKKFDINS"
     gene            10022..10288
                     /gene="ffs"
                     /locus_tag="U0308_000008"
     ncRNA           10022..10288
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="U0308_000008"
                     /product="signal recognition particle sRNA large type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01854"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01854"
     gene            10442..11083
                     /locus_tag="U0308_000009"
     CDS             10442..11083
                     /locus_tag="U0308_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315026.1"
                     /translation="MQQLKSKKKWLPALIVAVFVGIIVILAIMFGFFQRQEVFDKYEV
                     AYEIDGKLYEVFPISATDIGVDKKSKDKNLYFRVNSYYNIDYLFRLAYKQYEINEPST
                     NKYYAGLIDYSVADNAYVTQKDVYITNNESYATYDFFDKNGKKIYTYNPEETSNDDYI
                     VRIKPTILQGYEKSDIGSYDDYLNITALFKDKLGMDVNVRIDEDKEMVIFSIK"
     gene            complement(11115..11270)
                     /locus_tag="U0308_000010"
     CDS             complement(11115..11270)
                     /locus_tag="U0308_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315027.1"
                     /translation="MAVKRDMPEESKNSKVVKKEHFSIVFPDDIKEPKNASEQKKQDV
                     EKKTDDN"
     gene            11711..13075
                     /locus_tag="U0308_000011"
     CDS             11711..13075
                     /locus_tag="U0308_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2315028.1"
                     /translation="MNGLTAFLEKYFVPVAAKIGSQKHLVALRDAFISTMPITMAGSI
                     AVLLNAFFRDFPTDWGWTGFVEAMQPLIGINGYVYNGTLAIVSIIFAFSLGYNLSKAY
                     EVDRLAGGLVSLAAFVMNLTVTVSLDAVKAAIAASNANFDVATLPKEFAGIYGFFSLS
                     QVNGTGLFTAMIFGFISTIIYAKLMRRNIIIKMPDSVPPAVSKAFAAIIPALVALYVV
                     GIIDWAFFKITNMDVITWISKTIQEPLLSLSQGYGAVLLVTFLVQLLWFFGIHGPNVL
                     APVLESLWGTAQLQNISAAQEGAKLPFEWVRGSFDAYVWMGGSGGTLVLIIALLMFSK
                     RADARTVAKLSLAPGIFNINEPIMFGLPIVLNTIYLIPFLIAPMVMVTIAYFATTLGI
                     VGPVKIAVVWVMPPLLNSFLATGGDWMAPVISLINMVVAFLIWVPFVITANRVGVPEE
                     EMKA"
     gene            13210..13431
                     /locus_tag="U0308_000012"
     CDS             13210..13431
                     /locus_tag="U0308_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315029.1"
                     /translation="MIILNCPMKRDYITELLETYDKDGVTFKKIDEKGMKLTFETNIE
                     DEEKAAKIAKETIKATEIGSVLYFQVSVG"
     gene            13434..13616
                     /locus_tag="U0308_000013"
     CDS             13434..13616
                     /locus_tag="U0308_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3188 domain-containing protein"
                     /protein_id="HEM2315030.1"
                     /translation="MKIVNALFLISIGLIIIMFSPSYGKDGMASVPLLVTGLAVVLIG
                     CVFIVLKIRKDKKEKN"
     gene            13634..14098
                     /locus_tag="U0308_000014"
     CDS             13634..14098
                     /locus_tag="U0308_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3284 domain-containing protein"
                     /protein_id="HEM2315031.1"
                     /translation="MNVTQKLYISQKECFDTLVSSAIYDVKNATGKTLQVRKLEGYKY
                     QRTMSNGALATTKIVKVQPNELYQFETSSRVNTHTTTYTIKSTSETTCEVTYNELIET
                     EKALNKMNNIIVGFMFGFFRKKRVKNLLKSIELSVINESKQKQEKLAAKSEQ"
     gene            14347..16086
                     /gene="dnaX"
                     /locus_tag="U0308_000015"
     CDS             14347..16086
                     /gene="dnaX"
                     /locus_tag="U0308_000015"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEM2315032.1"
                     /translation="MAYQALYRIFRPQSFQDVVGQEHVTKTLKNAIVQNKTSHAYLFS
                     GPRGTGKTSAAKIFAKAINCEHGHDGEPCNECEICKGTTDGSIPDVLEIDAASNNGVE
                     EIRDIREKVKYAPTVAKYKVYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTEPH
                     KLPLTIISRVQRFDFKRITTQDIIGRLKFILEEEKIPYDEKALMIVARAAEGGMRDAL
                     SLLDQVISYGSEEVAVEDALEITGSVAQNLLTKLVSAAFDGDAAEAISTLTALLAEGK
                     DPVRLVEDLLVFFRDVLLYQKAPNLEETLERALIDDDFVALAKRADSLKVYEFVKILN
                     TAQQQMRFSNHPGIYVEVALVQLTQAGKSVAGGGNVPADAASGSDVSDLKRQMEQMHQ
                     EIQTLKKQIASGAGAAPADKPTQNRGGSKKAINNGKQFKAPIGKINHVLGEAKKENLQ
                     LIRGCWGELLSMLMASQAALLNDAEPVAASQDTFVLKFKHEIHCQMAMDNPNFVETIT
                     SSIARLTQVNYTFIGIPEDQWADVRENFLHSHGSDGDAEDGANPEAKKPAEDPFVAEA
                     AKLVGEDLLEIKD"
     gene            16116..16433
                     /locus_tag="U0308_000016"
     CDS             16116..16433
                     /locus_tag="U0308_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEM2315033.1"
                     /translation="MRGMGNMQGMMKQMQKMQKEMAKAQADLEAQEFTGTAGGGMVTV
                     KATGKRVITDVVINEEVVDPEDIEMLQDLVLAATNDVLKQIEDTTSQTMGKFTQGLNI
                     PGM"
     gene            16542..17138
                     /gene="recR"
                     /locus_tag="U0308_000017"
     CDS             16542..17138
                     /gene="recR"
                     /locus_tag="U0308_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEM2315034.1"
                     /translation="MHYPEPITKLIDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFA
                     KALVDAKRNLSFCSVCGHITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHG
                     LYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLL
                     KPSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRREV"
     gene            17153..17398
                     /locus_tag="U0308_000018"
     CDS             17153..17398
                     /locus_tag="U0308_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaaL family protein"
                     /protein_id="HEM2315035.1"
                     /translation="MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQEKWHKQKVL
                     MRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK"
     gene            complement(17444..18286)
                     /locus_tag="U0308_000019"
     CDS             complement(17444..18286)
                     /locus_tag="U0308_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2315036.1"
                     /translation="MTLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVG
                     YRLFDTASFYHNEKELGDFFASSGLKRDEFFVTTKMWNTEQGYDETLRAFEKSQKKLQ
                     LDKIDLYLVHWPKQDTFFDTWRAVEKLYDEGLVRAIGVSNFEAHHLDRLRTSANVLPV
                     VDQLETHPHFPNHLLHRYLEELHIVHQAWSPLGRGGVLQEQILIDLAEKHGKSPAQIV
                     LRWHLQNNISIIPKSETPSRIRENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYV
                     RSEI"
     gene            18402..18848
                     /locus_tag="U0308_000020"
     CDS             18402..18848
                     /locus_tag="U0308_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX pyrophosphatase"
                     /protein_id="HEM2315037.1"
                     /translation="MRQPFQVLVIPFIKTEANYQFGVLHRTDADVWQFVAGGGEDEEA
                     ISETAKRESIEELNLGVKVKMYSLDSHASIPNFHFSFNKPYVVPEYCFAIDLTSCSYQ
                     VTLSLEHSELRWVSYESAVQLLEWDSNKTALYELNERLKNNDMKAI"
     gene            complement(18876..19715)
                     /locus_tag="U0308_000021"
     CDS             complement(18876..19715)
                     /locus_tag="U0308_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2315038.1"
                     /translation="MTTQAIILDIDGTLLNDDKKISPETKKALITAQQNGVKLILASG
                     RPTTGMHVYAEQLEMEKHHGLLVSYNGAKVVDCATSEELFNQALTVEEGKAVLEHMKQ
                     FEVKVMIDKEDYMYTNDVYDCYVPYRGEVINIVQYESRGGNFKLCEKDDLAAFLDYRL
                     NKILTAGDPAYMQENYQAMMAPFKDTLNCVFTADFYFEFTAQGIDKAKALDTVLTPMG
                     IHAENVIAFGDGHNDITMVEYAGTGIAMQNAVPELKAAASSVTLSNNEDGIAHVLNSL
                     IPS"
     gene            complement(19834..20685)
                     /locus_tag="U0308_000022"
     CDS             complement(19834..20685)
                     /locus_tag="U0308_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2315039.1"
                     /translation="MNILIKIRELTNLTNSEKELANYILANPKKTLQCKPKELATAAF
                     VSAATIYRLINKLGLNGIGELKIEIASSLRETNEEKDLNYDYPILESDTPYQIMTNLN
                     QIYKGTIDETLNNADPEELVKIGEKLIQAKTIDVYAASANLFFAQNFKFQMQEIGVLV
                     NVPEEDYIQSLSAANSDENHIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNP
                     LVEFATHKIYMASAENHYNKVSSFSTRQSLLSIFDTLYSIYFNQNYEKNIQYKTTNYQ
                     KMNTELE"
     gene            complement(20791..21165)
                     /locus_tag="U0308_000023"
     CDS             complement(20791..21165)
                     /locus_tag="U0308_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HEM2315040.1"
                     /translation="MAKPYGVVIISHSKDVAKGVHDIIKEIAPDVSITHAGGTEDGRI
                     GTSFDAVNEAIESNEANKVYTFYDLGSAKMNIETVEEISEKEIILFNAPILEGAYATA
                     AQVQMDEKPEVIAANLKTIEIK"
     gene            complement(21169..21765)
                     /gene="dhaL"
                     /locus_tag="U0308_000024"
     CDS             complement(21169..21765)
                     /gene="dhaL"
                     /locus_tag="U0308_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit L"
                     /protein_id="HEM2315041.1"
                     /translation="MTYDKDWALRWLNDFGERVQENKQLLSDLDQAIGDGDHGINMAR
                     GLGELKKAFTEKEPADLKDVFKTAGMTMVSKVGGASGPLYGTAFLNMSKAVDSETIDA
                     EGLTKVLEAGLEGIEKRGKSHAGEKTMIDVWEPVVNALHQEDLTDDVVEAALQKTKDL
                     KATKGRASYLGERSIGHLDPGAYSSALLFHAMLQTEVS"
     gene            complement(21787..22776)
                     /gene="dhaK"
                     /locus_tag="U0308_000025"
     CDS             complement(21787..22776)
                     /gene="dhaK"
                     /locus_tag="U0308_000025"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HEM2315042.1"
                     /translation="MKKILNGTDQVVEQMVEGLVKSHADVVHRVEGTRVIARNDKRPG
                     KVGLVSGGGSGHEPAHAGYVGRGMLSAAVCGDVFTSPTPDQIYEGIKAADQGAGVLLI
                     VKNYTGDVMNFEMAADLADADDIKVEQIVVDDDIAVEDSTFTTGRRGVAGTVLVHKII
                     GAAAEAGASLDELKALGEKVIASVKTLGVALTPCTVPEVGHPGFELGDDEIELGIGIH
                     GEPGFTREKIMPSASLAKQLYERISNESKFLPGDKVVVLVNGMGATPLMEQYVFANDV
                     HELLKNAGVQVEKTLVGDYMTSLEMAGLSLTILKLEDEKWVDMLKLPVDTIAW"
     gene            22960..24339
                     /locus_tag="U0308_000026"
     CDS             22960..24339
                     /locus_tag="U0308_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEM2315043.1"
                     /translation="MRNQSKMPLVERLDAHAKSCPISLHVPGHKSGAIYPDAWQKFLK
                     WDVTEITGMDDLHHPEDVILEAEELLAECYGSKKSYFLVNGTSGGSLAVIMATLKHGE
                     KVLVPRDAHKSILHGIELAGGEPIFLTPATNEEVGVASGVTTELLEETLHNHPDIKLC
                     IFTYPSYYGTTFNLHKCIQIAHDFGAVVFVDEAHGAHFLTSSEFPKSAVELGADVVVQ
                     SAHKTLPALTMGSYLHVVNDLPIFEKLPYYLQVFQTSSPSYLIMASLDAARKYAATYT
                     AADVEAFWKMRARWIKWLTKNKFDVILPDDPLKIIVRKTGYTGYELQAIFEESSYFPE
                     LADESQVLLILPLIKKGIDFTPISRIHSPVKKEIAKEPYEMSAPFASGLALTYEEMHA
                     RATEFVLLDEATTRVSAETISLYPPGIPAIIRGESITEKHIRELKNIRTRHYQGGEKL
                     AENYIRVFR"
     gene            24392..25018
                     /locus_tag="U0308_000027"
     CDS             24392..25018
                     /locus_tag="U0308_000027"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEM2315044.1"
                     /translation="MKAIFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSP
                     ISEKVRNIVLGIGNEEMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSL
                     AYQGAGRDMNMEQVLQVNLYAIEDTLPDRTYYLDVPAEVGLARIAANKGREVNRLDKE
                     DITYHEKVQAGYEKVINMFPERFMRVDATKTPEEITETILADILRQLA"
     gene            25127..25456
                     /locus_tag="U0308_000028"
     CDS             25127..25456
                     /locus_tag="U0308_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP receptor"
                     /protein_id="HEM2315045.1"
                     /translation="MKLIFAIVQDQDSNRLSDALTKGNFGATKLATTGGFLKAGNTTF
                     IIGTEDERVEDALAIIKENCKAREQMMTPSASLGVTVDTYVPYPIEVQVGGATVFVMP
                     VESFHHF"
     gene            complement(25687..27462)
                     /locus_tag="U0308_000029"
     CDS             complement(25687..27462)
                     /locus_tag="U0308_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-beta-N-acetylmuramoylhydrolase"
                     /protein_id="HEM2315046.1"
                     /translation="MQKTRKERILEALQEEKKNKKSKKFKTGATIAGVTAIATSITVP
                     GIEVIVSADETAPADEASKSAEANTTKETPATATPENTTEPTVEAKQTETKEQTKTAE
                     ENQAAAKQVEKAPAEPATVSNPDNATSSSTPATYNLLQKSALRSGATVQSFIQTIQAS
                     SSQIAAENDLYASVMIAQAILESAYGTSELGSAPNYNLFGIKGAYNGQSYTKQTLEDD
                     GKGNYYTITAKFRKYPSYHQSLEDYAQVIRKGPSWNPNYYSKVWKSNTTSYKDATKAL
                     TGTYATDTAYATKLNDLISRYNLTQYDSGKTTGGNSGSTGNTGNSSNTGNTSNAKIYT
                     VVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKVSAGSTTSDTNTSKPSTGT
                     STSKPSTGTSTNAKVYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPGQKLKVS
                     AGSTSNTNTSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNHKVTIANLKSWN
                     NLKSDFIYPGQKLKVSAGTTTNTNTAKPSTNKPSNSTVKTYTVKKGDSLWAISRQYKT
                     TVDNIKAWNKLTSNMIHVGQKLTIK"
     gene            27624..28190
                     /locus_tag="U0308_000030"
     CDS             27624..28190
                     /locus_tag="U0308_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2315047.1"
                     /translation="MITNESIMDATLCMMAKHGIKGSTTRQLAEAAGINEATIFKKFK
                     SKDNLIHMTLEVQFESMKAEINQFFDKDFESAKVFLRQASQFISDIYEKYRDFMVISV
                     REMGSKDMEFIDPSIVEYLYERVNQKVKEMVPSKNSAQEADAISLILNSVILLIMVEK
                     VRDDIYKRPPTITTTADSLADVLLKLLK"
     gene            28744..31314
                     /gene="mgtA"
                     /locus_tag="U0308_000031"
     CDS             28744..31314
                     /gene="mgtA"
                     /locus_tag="U0308_000031"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HEM2315048.1"
                     /translation="MKKLHVKKQGNNLLKESQIGKEKVLEKLGVMETGLTNVEVTERL
                     AEFGPNQTVEEKKVSNLRLFIRAFNDPFIYILAMLMVVSYLTDDMEATVIMALMILAS
                     GILGFIQTSRAERASYALKNMVKNRVNVIRNGSMDLIMQDAIVPGDLIEISAGDIIPA
                     DARVISATDLLINQSALTGESIPAEKFVEDKSANPEIFERENLLFMGTDVLSGHGRAV
                     VLRTGSSTFFGSLSIAATERRGDTSFDKGVKSISKLLFYFMMVMVPIVFMINGLMKGN
                     WLEAFLYAVAIAVGLTPEMLPMIVSTNLAKGAINMSKKKVIMKELSAIQNIGAMDILC
                     TDKTGTLTEDKLELIKYIDSAGETSERVLKMAYLNSYFQTGWKNVLDHAVIAKLDEST
                     AAAWKKVGEIPFNFDRRRLSVVVENKAETRMITKGAVEEMLTVCTHKEFGGAVSTLSE
                     SEKSELQDMCAEMNRSGIRVIAVAYKTGRVGEAFTKTDEEQMIIAGFLGFRDPVKAST
                     KEAIAHLFKNQINVKVLTGDNEIVTKRICQEVGIPANGFLLGADIEELSDEELTRELR
                     KYHIFAKLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADITKD
                     ASSVILLEKSLTVLNDAVMEGRNVFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPM
                     LSLHLLLQNLLYDFSQLTLPWDKMDRSFLKKPHQWEQKGMLRFILCIGPVSSIFDIAT
                     FLIMWFVFSANTVAEQALFHSGWFVVGLLTQTLVVHMIRTEKIPFIQSRAAAPVMIAT
                     LSVMALGIIIPFTGFGHSIGFVSLPGSYFPWLILILVGYMATMQLVKTIYIRKFREWI
                     "
     gene            31315..32445
                     /locus_tag="U0308_000032"
     CDS             31315..32445
                     /locus_tag="U0308_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEM2315049.1"
                     /translation="MRAGRVLFVTYILLAIWSLLLVYSTSYGVAVMRYKVEPSYFFHR
                     QLLFYGLGFLGLLVCSRINVQLFYLRRTLRILAGSLLGLLLLVLLTGSAANNAQRWLS
                     IAGVTFQPTEMVKLLLILVIATVFLKKGCGVRVQYWLLGFLFLTVGLVFLQPDLGTAL
                     ILGVIGVALFLTSGVGLTRLVRVAIWSFGLLLLVAMLLYFFHPDFFSSAKLGRFAFLD
                     PFNLDNLDASYQLRNGYYAIGSGGIFGNGLGGSIQKLGYLPEPHTDFIMTVIAEELGV
                     FGVIWTIFLLMMLSFTALYIAISSHFIFDSMVCIGVSSWVSVQTFLNLGGVSGIIPLT
                     GVPLPFISYGGSSVVMLSCAVGFVLAAARRNVLAKTREVVYL"
     gene            32442..33563
                     /locus_tag="U0308_000033"
     CDS             32442..33563
                     /locus_tag="U0308_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEM2315050.1"
                     /translation="MKRDVLYNRIILSVFLLSLVSCVAIYYAQQTNQYNTNFLGMQLV
                     FLAIGTLTCFGVSRLPVEFLRHHAIWLYVIMVITLLGILIPNPLVQNINGATRWYRFA
                     GLSFQPSEVVKSIFIFVLAHFAVKYQAQKWKQLGILTVLTGIVLLLIMKQPDLGTTIV
                     YGVTALAIILLAIKSTKLMVGIITLILTAATVGMYVVVYHISLLEKIGFHAYQFSRIQ
                     TWLDPTTDPDAVYQLNLSIKAVGSGMMTGSSGTNAYIPESHTDMIFSTIGHQFGFVGV
                     SLLLILFMLLIHQLIMAALLMKNTFSSLVLAGFAVSFAFNIFENIGMTVGLMPLTGIP
                     LPFISYGGSAVLGNFIAVGVVLAIIRSDADLIEEKNQLS"
     gene            complement(33585..33887)
                     /locus_tag="U0308_000034"
     CDS             complement(33585..33887)
                     /locus_tag="U0308_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2315051.1"
                     /translation="MDLEQTIMSLIVFGGNAKSDAMLAIDSAKKGDFAQADEQIAQAE
                     QALLEAHHSQTKLIQGEARGEKTEVSLLLVHAQDHLMNAITFKDLAKEIVDLYKNK"
     gene            complement(33924..35231)
                     /locus_tag="U0308_000035"
     CDS             complement(33924..35231)
                     /locus_tag="U0308_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2315052.1"
                     /translation="MNGFIAFMEKYFIPYAAKIGGQRHLVAIRDGFITTMPLMILGSF
                     AVLINNFPIPAYQKFMNNLFGEGTWQAFGGNVWNGTFAILALLIAFTVAYNLAKSYDK
                     DPLSSAVVSVATFFTIGAIAPGADGVANTGGLGSTGLFLALIIAILSTEIFTRLSGSP
                     KLIINMPDGVPPAVSRSFAALFPAMITVSIFGLITAFFQAAGVTNLVISFYELVQEPF
                     MGLANSLPAALLLAFVSAFLWFFGLHGANIIDPFMQTINIPAIEANVKALEAGKELPY
                     IVNKPFFDSFVNLGGTGATIGLIIAIFIVARKHKAYMTVSKLSAAPGIFNINEPMMFG
                     LPIVLNPIMFIPYILAPLVLVTVAYFATAIGWVPACTIVTPWTTPPIIGGALATQSIA
                     GGVLAAVNLGLSILIFLPFAKIAQIQELRREKEALAAEGVTAE"
     gene            complement(35366..35671)
                     /locus_tag="U0308_000036"
     CDS             complement(35366..35671)
                     /locus_tag="U0308_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2315053.1"
                     /translation="MKTIMLVCSAGMSTSLLVTKMEKAAAEKGLEAKIFAVAEAEAAN
                     HLDEIDVLLLGPQVRFLEGNMKKKLEPKGIPLAVINSVDYGMMKGDKVLEQALELMK"
     gene            35925..36014
                     /locus_tag="U0308_000037"
     CDS             35925..36014
                     /locus_tag="U0308_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015455298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit F"
                     /protein_id="HEM2315054.1"
                     /translation="MGVVLVIAGIIGLGLLVYLFYVLFRGEDL"
     gene            36011..37696
                     /gene="kdpA"
                     /locus_tag="U0308_000038"
     CDS             36011..37696
                     /gene="kdpA"
                     /locus_tag="U0308_000038"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HEM2315055.1"
                     /translation="MKYIVMQDAFFVVLLLVLAVPLGIYMYKVMIGEKVFLSRVLEPV
                     ERFGYRLMGVSEVGMSAKRYAVSVLAFSAVGFVFVMAVLMLQGFLPLNPEGMKGLSFS
                     LAFNTAASFVSNTNWQAYSGEAALSYFSQSIGLTVQNFVSAATGIAVLFAVIRGFIWK
                     KQKTIGNFWQDLFRVTLYILLPLSLILALLLVSQGVVQSFADYSVVETLENGAKQLIP
                     LGPAASQIAIKQLGTNGGGFFGANSAFPFENPSSFTNLIEMLAILLIPVALVVMFGRA
                     VKDSKQGRAIMTAMMIVFVIGVVAITISEQFAGPHYQGVATSGSMEGKEVRFGVGGSS
                     LFAASTTAASNGAVNAMHDSLTPLGGLVPMFFMQLGEVVFGGVGSGLYGMIGFIILTV
                     FIAGLLVGRTPEYLGKKIEPYDMKMVCLLILVPPLLTLFGTAVAVMMPSVQASVSASG
                     AHGFSEVLYAFTSMGNNNGSAFAGFAADTTFTNMVGAVMMLLARFIPLVAALYLAQNM
                     AGKSSVAASSGTLSTKNGMFIGLLIGVVVLVGALSFLPALALGPIADFFTTFK"
     gene            37708..39753
                     /gene="kdpB"
                     /locus_tag="U0308_000039"
     CDS             37708..39753
                     /gene="kdpB"
                     /locus_tag="U0308_000039"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HEM2315056.1"
                     /translation="MMEKGIWKDALIQSTKKLSPKLQVKNPVMLLVYVGAILATSLYF
                     LGFFGISDEKSGYTLAIALILWFTVLFANFAEAIAEGRGRAQADSLKMARKDVLARKL
                     KNIDDKTDVIEIASNDLKKGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIR
                     ESGGDRSAVTGGTTLVSDWLVVRVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILL
                     VTLSIIFLAVSATLLPFTEFASKQAGAGSAISITNVIALLVCLAPTTIGALLSSIGIA
                     GMSRLNQANVLAMSGRAIEAAGDVDVLLLDKTGTITLGNRKASEFLPVDGVTEQELAD
                     AAQLSSIADETAEGRSIVVLAKERFDIRGRDFAEMHAEFVPFTATTRMSGIDYQENTI
                     RKGAADAVRAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNKVLGVIYLKDIVKN
                     GVKERFLDLRKMGIKTIMITGDNPMTAAAIAAEAGVDDFLAEATPEAKLELIREYQRE
                     GHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTKLIDIVRIGKQ
                     LLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPQLEALNLMGLTSPTSAILSAIIYNA
                     VIIIILIPLSLKGVKYREMPAGKLLSRNMLIYGLGGLIAPFIAIKLIDMLLTVLGIV"
     gene            39768..40340
                     /gene="kdpC"
                     /locus_tag="U0308_000040"
     CDS             39768..40340
                     /gene="kdpC"
                     /locus_tag="U0308_000040"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
                     /protein_id="HEM2315057.1"
                     /translation="MKRFMQIWKPAVVGFLLLTLMCGVVYPGIVTIFASAAFHDKANG
                     SIIEEKRADGTTGKVGSAEIGQTFTKPEYLIGRAASDGVATNLNPTSEEQKQLVEKRI
                     AWWHKLDPTNNRVIPMDLVTASASGVDPDISEAAAAYQVDRISRERGISTKQVKEIIA
                     EHTSDRLLGFWGEPTVNVLQVNLALDRLKM"
     gene            40356..43046
                     /locus_tag="U0308_000041"
     CDS             40356..43046
                     /locus_tag="U0308_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HEM2315058.1"
                     /translation="METNRPSPDALLVNLQEETDSSVGKLKIYFGFAAGVGKTYAMLS
                     DAKDQLAAGVDVVAGYIEPHAREETLRMLEGIPIIPPKAITHKNIALKEFDLDEALKR
                     KPELILVDELAHTNASGVRNKKRFQDVEELLQAGIDVYTTVNVQHIESLNDIVEGITK
                     VAVRETIPDYVFDEADRVKLIDIEPDELLKRLEQGKIYQPARAKTAMQNFFTRENLKL
                     LREIAMRKAADRISHEYDQTGVYPEKRASSKWLVCIGTSPSSAKLIRWTARTAEAFRA
                     PWTALYIENEENDYMTKAEKKCLRETMELAERLGAEIVTLAGHDIAETVAEYARLTGV
                     TNIVVGKSRRRMGLRSLFEDDFEDRLITHLDNVDMHIIPSSQPKTKKRRMKMRFKSFL
                     TWHDMAKMILLLTLATAICVGLSEFGIGDQNVIMVYILSVLIISRVTSGYVYGVMGSI
                     IGVMLFNFFFTTPLYTFNTIQAGYPVTFGIMLLVALITSALTVRIKTQASLAVERERR
                     TEVLYEINKRLLVTRNLKGIIDLTNEYILHLFSRSVIFYSADPAKSNKGIFVQAEGKE
                     DASALLSADEEAVAHWVFKNKKRAGAGTDTLMGAFGYYMPVMSQGKVLGVIGVSCSPE
                     DGPLTQDNRIFLRMISSQVALALERQYLSEEQRQIVIESAKEKMRSNLLRAISHDLRT
                     PLTGIVGASSALLEKETELDKETEHNLIKGIKDDSGWLIRMVENLLSVTRISEGLVSL
                     ERAPEAVEEIVGEAVGRIKKRFADRTIHVKVPRDLLMVPMDGTLIEQVLINLMENALR
                     HGGTGAEVWVDVTKTKQSAIFSVRDNGKGIPEKRLPDLFDTFAVEARERSDMSRGLGL
                     GLSICMSIIRAHDGTLEAKNNKHGGATFWFTLPLDGGDGK"
     gene            43043..43738
                     /locus_tag="U0308_000042"
     CDS             43043..43738
                     /locus_tag="U0308_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2315059.1"
                     /translation="MNSKRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQT
                     ASHSPDVVLLDLGLPDVEGLDVLRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYI
                     TKPFGTSELLARIRTALRHIQPSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTP
                     IEYKILLLLARHAGKVLTHDFIIREIWGPYPSENQALRVNMSNIRRKIEQNPAEPAYI
                     LTEVGVGYRMAEE"
     gene            43779..44591
                     /locus_tag="U0308_000043"
     CDS             43779..44591
                     /locus_tag="U0308_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2315060.1"
                     /translation="MHKTIRSVDVYYEKYGEGIPIIMIHGFGPDSQLMIGCMEPVFDK
                     ESPFSRIYVDLPGMGKTENYDSIQNADHVLTLLLEFIEAVIPGEQFVLAGESYGGYLA
                     RGIAAKMPDRVLGVLLICPVIYPEKERRTLPEQKVMYQDDTFVRSLSKEDRAYFSKSG
                     VILTARNWNRFLAEVMAGMINADGEFLDRLSANYALSFDPDEKAQFDVPALFLFGRQD
                     DHVGYADGLTLLEKYPHASIAILDFAGHNLQIEQPKIFTTMVEDFLFRVKPE"
     gene            complement(44593..45849)
                     /locus_tag="U0308_000044"
     CDS             complement(44593..45849)
                     /locus_tag="U0308_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HEM2315061.1"
                     /translation="MHRAVIFCASILNRFFASVECVKRRLNPLEAYLVVMSNADRAGG
                     LVLAATPKMKQEHHIKTGSRMYELPTWDKRIIIAPPRMKLYLKVNAMIQAIFRRYVPA
                     EFIHVYSIDECFLDITGSHLLFGSTEEIVRKIQCDILEELRLYVTVGIGDNPLLAKLA
                     LDNVAKNRDDGIAEWRYEDVPETIWKIRHLDDVCGIGRRTAVRLQKMGIFNMYQLSQT
                     PPQVLKNAMGVVGEQLYYHAHGIDYSLLNEKYVPVSKSYGKSQILEKDYHVPAEVEIV
                     IREMVEEVAMRLRQNHVDTAVIHLSIGYSKYSIKKGFSHQAKIPPTSSSHALIPYFLQ
                     LFRRYDEREPVRSIAISCGKITLKTGLQLNLFEDATRTLNHEQLEITVDKIRSRYGFK
                     SLMHASSLLNGATGLKRSEMVGGHKG"
     gene            complement(45862..46203)
                     /locus_tag="U0308_000045"
     CDS             complement(45862..46203)
                     /locus_tag="U0308_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315062.1"
                     /translation="MSYQDRGMKKWGGFLLSEHTEAMQDAEPTLVWKEAMTTEFIESV
                     LASAMTHQSTLVIQKKPLNPESAPENDIIGRISGVENNTIYIKNSEGTVPLSFSAIRN
                     VEERSVEKWYK"
     gene            complement(46402..46857)
                     /gene="rpiB"
                     /locus_tag="U0308_000046"
     CDS             complement(46402..46857)
                     /gene="rpiB"
                     /locus_tag="U0308_000046"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEM2315063.1"
                     /translation="MTVSKVAIASDHGGIELRKSIISYLESVGISYEEFGPEAPESVD
                     YPGLAITVSEKVVNQEVDRGILVCGTGIGMSIAANKVKGIRCALVGDTFSAHATREHN
                     DTNVLALGARVIGPGLAEDIVKIWLETAYEGGRHANRVGQITAYEDSQA"
     gene            complement(46903..47373)
                     /locus_tag="U0308_000047"
     CDS             complement(46903..47373)
                     /locus_tag="U0308_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEM2315064.1"
                     /translation="MSAYKRILVGVDGSNEAEAALRRAVQFAKMDGATLGIGFVADVR
                     RIAPLIDYEQTYAKKAKAYGEELVEMYKKEAEKAGVSHVETFVHFGTPKTTFNKKITR
                     NFEPDLILVGATGLSATEQFILGSVSEYTAAHAPCDVIIVHAKPWRNRKTVEKL"
     gene            47489..48295
                     /locus_tag="U0308_000048"
     CDS             47489..48295
                     /locus_tag="U0308_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM2315065.1"
                     /translation="MAKLETFYPIVATPKRAGYKEYLPSAVLTGYIRCFWEADDKNFP
                     GNNLVVPDLCADIIFTIDSKTGLVTDAIFVGVSDAPFESDDESNTELFAVRFYAWSLF
                     LFVEQDLTGSMNRVKEPEEMFAGFVSFFQERFAEMTTNMERIALLEEFLLRKLMMLGK
                     QVHPDFLNGIDKLLQNPNQLALGAVSVRQLERLFQKHMGLAPKQTAKLIRFQKVLQAL
                     YENPSVPGAELAYLHGFTDQAHLIKQFKRYSNHTPEEMKQIFLQNVANIQ"
     gene            48341..48709
                     /locus_tag="U0308_000049"
     CDS             48341..48709
                     /locus_tag="U0308_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2315066.1"
                     /translation="MINEFVCTNISTQDPAALVAFYHEKLGIPIVFEGYDNYDGAKLG
                     FSEKAPGIIVWNNSKWGEASESKVEFVFSCDTNLDEMYRELQTAGVETPEPRVAEWGG
                     RELNLLDPDGNKIMILEPAQ"
     gene            48706..49068
                     /locus_tag="U0308_000050"
     CDS             48706..49068
                     /locus_tag="U0308_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEM2315067.1"
                     /translation="MSDEFAWIQKEISGLKGVQYSFKEEWGAERYHVLDQLMAMRGTN
                     KEGQPILTLKCDAEKSEQLRAENRAIVPGYYMNKRVWISVLLEEERDKDLIRALIQHA
                     YSEAKNKLPKYKQAELFD"
     gene            49142..49954
                     /locus_tag="U0308_000051"
     CDS             49142..49954
                     /locus_tag="U0308_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315068.1"
                     /translation="MDINMFILYFFIYSVLGWAWEEIFCSISEKKLVYRGFLYGPYCP
                     IYGFGVTTVLMMILPFQNNLWALFIFSMIICTVIEYVTATILEALFHTTWWDYHNWPL
                     NVKGRICLPISIFWGFACIIVVRFLHPLVTEFADWILSWGGWIIPALIVVLMLIDTIK
                     SVTSMLSFQKALAEFNEKLTAQANELKASVKERAKEFEEGLLKKQENVDMKIAEIEAK
                     RKQDKELAASMRKLKFNERRMLKSFPKMKVKRAAPFKNFNKSLLRVDKQKRK"
     gene            50324..52393
                     /locus_tag="U0308_000052"
     CDS             50324..52393
                     /locus_tag="U0308_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2315069.1"
                     /translation="MYLDERSNSLLKELLRHPDTSSTNLQAKFGLTRRQVDYSFQKIN
                     NWLEEQTYPKIHRAANGRFIVEPDLFQIIGEEDGEKTDWYIPSEKERASLIILMLTTG
                     SEELSLNHFISELEVSKNTVLRDLKLVQKTLEKFNLEVKYSRMRGYLIDGDEWNQRTA
                     LIYAAEHIIESFGGEEYLQDFMQVDEARIKELREKLEQVEHHLNLHFIDNKMQILPYI
                     LEAVFRRMKKGQTITTSFLIDYNELSDTREYGAAEIFIEEEPNMPEAERMYITLQLLT
                     SNVLPKQYLKSEETHKLRLALEQVLSEFEKKACIQLVDKESLLEKLFAHIKPAYYRIK
                     YHLTTDYSILDKIDQEFQAVHYIVKESLAPLERFIGSKVPENESIFITLFIGGHLIES
                     TEKLQTRLKAVVVCPNGLSISRLMEKTLRSLFPEIFFYQAMSIREFEQTKLGYDIVFS
                     AVPLSTDKKFFLINQLMDGKERLELRRRVMRAVYLVDEVNISVDQLMKTISKFADIKD
                     AARLEKVLADYLMPVPEENTSKHEGKSTLADLLEVTRITRKKSVKDWHEAIYHAALPL
                     LSAGVVEPAYVEEMKRQYPAPIMNIILRNTIAIPHAETEKGVNSLGMSLLYLEEGLPL
                     EGGKELHFIVVIAAIDKNAHFTALLQLMELSENKKELKKLADAANTEEMHQIIKNFTD
                     LETKKTM"
     gene            52427..52891
                     /locus_tag="U0308_000053"
     CDS             52427..52891
                     /locus_tag="U0308_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2315070.1"
                     /translation="MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLT
                     RLTDREQTFPTGLKLDGYGVALPHTDPECVTEQFIAVITVKDGIPFKLMEDAGQTVEA
                     NLIFVLGLNEPHSQLAVLQQLMGTIQDKDNVAALLRAKDEDEVKQILETITV"
     gene            52949..53230
                     /locus_tag="U0308_000054"
     CDS             52949..53230
                     /locus_tag="U0308_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2315071.1"
                     /translation="MGQFKILVACGAGIATSTVVTDRVERLVKENNVDAEVKQIKISE
                     AASMQDGADLIVSTTILPTTYKIPAIIATSYITGMGMEELDEEILAHLK"
     gene            53291..54562
                     /locus_tag="U0308_000055"
     CDS             53291..54562
                     /locus_tag="U0308_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HEM2315072.1"
                     /translation="MDTLLSGVQYVLNLGPTVILPIMIFFIALIFRVPAKKALRSAIT
                     IGIGFVGINLVISLLSSNLGPAAQQMVERFGLNLTIIDAGWPAAAAASWASPVAAILI
                     PICLVVNLALIFFKVTKTLDIDIWNYWHFIAAGATGYIVTGGNWWFAILCAIIYEVAV
                     LWMADRTQPMVEEFYGLKGISLPTGSTAAFGFIGIPVGWLIAKIPGIKNIHVDPETIQ
                     KRFGIFGEPMMMGLILGIAIGILAGYDVGAVAQLGMSMGAVMFLMPRMVKILMEGLIP
                     ISESAREFMKSRFKGRELYIGLDAALSIGHPANISTGLILVPITLFLAVIIPGNKVLP
                     FGDLATIPFYVSFVVASRKGNILHSVLAGTVVIALALLMATDFGLVHTEMMKGVYEFP
                     KGATQVSTLDMGGNFFNWVILKFSQAWAAIF"
     gene            54599..55651
                     /locus_tag="U0308_000056"
     CDS             54599..55651
                     /locus_tag="U0308_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HEM2315073.1"
                     /translation="MRAAVLYENNVIKAEQIDEATCGKDQVRVEVKAVGICGSDIHKM
                     QTRWKYPLPAVMGHEFAGVVTEIGSEVTNVAIGDRVAGIPLEPCMECNYCKAGDFALC
                     DNYRMVGSHFHGGFAENVVMKADNVISIGDLDFEEGAMIEPLAVSMHGVLGIQPRLGD
                     TVIVFGIGTIGILVVQCLLLAGVKDIIAVDISDKKLADAREFGCKYTINPKNEDLKER
                     VFAYTNGLGADIALECAGSKITQEQCLLVTKKKGKVGFLGIAYADVLLHEEAFENIFR
                     RELTLKGFWNSYSAPFPGEEWRTSIEFVKQGRIKLKPLISHRYKLEETKEAFDMILSR
                     EHDYNKVMILPQKGDD"
     gene            55653..56684
                     /locus_tag="U0308_000057"
     CDS             55653..56684
                     /locus_tag="U0308_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEM2315074.1"
                     /translation="MKAVVKTNPGYDQMELRDVEEPQVYGDKVKIKVAFTGICGSDIH
                     TFKGEYKNPTTPVTLGHEFSGVVVEVGPDVTSIKVGDRVTSETTFETCGECIYCKERD
                     YNLCSNRRGIGTQANGSFAEFVLSREESCHVLDERISLEAAALTEPLACCVHSALEKT
                     TIRPDDTVLVFGPGPIGLLLAQVVKAQGATVIMAGITKDSDRLRLAKELGMDRIVDTL
                     KEDLAEVVLGMTDGYGAERVFDCSGAVPAVNQGLPLTKKKGDFVQVGLFAEKKNAIDE
                     ESIIQREIAYIGSRSQKPSSWILALDLLANGKINTDKMITKVYGLDDWREAFEAVMAG
                     NEIKVLVKS"
     gene            56879..57319
                     /gene="rpiB"
                     /locus_tag="U0308_000058"
     CDS             56879..57319
                     /gene="rpiB"
                     /locus_tag="U0308_000058"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEM2315075.1"
                     /translation="MKLTIGCDHGGRRLKDAIVKHLREKDIEVVDIGTYTDESVDFPS
                     YAEEVANQVVSGQSELGILCCGTGIGMSIAANKVDGIRAAVVSDTFSARATREHNNSN
                     VLCLGERVIGEGLALLIVDTWLEASFAGDRHKRRLDKITELERK"
     gene            57328..58002
                     /locus_tag="U0308_000059"
     CDS             57328..58002
                     /locus_tag="U0308_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEM2315076.1"
                     /translation="MRKIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNL
                     ALGPEYLEIVRNNTEIPLDIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIRK
                     IRSYNVKPSIAINPETPIEAIYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKA
                     KLAGKVHAPLIEVDGNINKETVGLMRDCLPDIYVLGTSALFHDRDKTSYAERLVHIWS
                     DVEKHV"
     gene            58036..60051
                     /gene="tkt"
                     /locus_tag="U0308_000060"
     CDS             58036..60051
                     /gene="tkt"
                     /locus_tag="U0308_000060"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEM2315077.1"
                     /translation="MKKTLDRQAVDTIRSLSIDMIEKANSGHPGMPMGAAPMAYMLFA
                     KHLVFNPANPEWFNRDRFVLSAGHGSALLYSMLHLFGYDVKMEDLKQFRQLDSLTPGH
                     PEFGWTAGVDATSGPLGQGIGMAAGMALAESHLAAEYNQPNYPIVDHYTYAICGDGDL
                     MEGVASETASLAGHLGLGKLIVLYDSNDICLDGDLSATFSENAADRFRAYGWQVLRVE
                     DGNNLAAIQEKIVQAKLETSKPTLIEVKTVIGYGAPTKAGSSASHGAPLGEKEANGAK
                     EHYEWAEEPFTVPAEVRDYLRNYKARGEKLEGAWNTMLANYKKEFPELASQLDRVLAG
                     EVAADWNANLPTFEAGTNVATRSASGKMINAIAAELPELFGGSADLGCSNKTFIDASP
                     AYSIQDPAGKNIWFGVREFAMGAMLNGMALHSGLRVFGSTFFVFSDYVRPAMRMAALM
                     QLPVTYVFTHDSIAVGEDGPTHEPIEQLASLRAMPGLTVIRPADAKETRAAWEIAATN
                     TNGPIALVLSRQDLPVLENAQEEVDAGVDKGAYIVAPANSSKPDAIIIATGSEVSLAI
                     EAKAELAKKDIDVSVVSLSSWERFEKTTDAYKESILPKEVTARFAIEAGATFGWKEFI
                     GSEGDMLGIDHFGASAPAKDLFNAYGFTPENVADRVETVIAKAGVRV"
     gene            60048..60692
                     /locus_tag="U0308_000061"
     CDS             60048..60692
                     /locus_tag="U0308_000061"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEM2315078.1"
                     /translation="MTFVAPSLLAADYMNMANSIKEAEHAGADYLHIDVMDGHFVPNL
                     TFGIDMVEQIKKTATIPLDVHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQ
                     IKAAGCKAGVVLNPGTPASVLDAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDH
                     WRRENNGSYVIEVDGGVNAETAEKCKQAGVDVLVAGSYFFRADDKIACIKELKA"
     gene            complement(60748..62217)
                     /locus_tag="U0308_000062"
     CDS             complement(60748..62217)
                     /locus_tag="U0308_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2315079.1"
                     /translation="MLQRRFWGIFCFAIFLFLFPTIGSAETSGDYEYTINGNEATITD
                     YTGQSTDITIPTTLGPNNEYTVTAIGNGAFKSKRLTNVTIPNTVITIGDGAFTINSLE
                     QLVLPNSVQTIGRNSFSVNKLEKITYSTALKNIPSQAFLANNLKTVTTPATVESIDAS
                     AFENNFITNITIQNPNLQMAYQAFAAQTVLSTLIVPSNHILPIENYIQFQDASAHLTT
                     DNLFITDLANGITYNQAEKALNFSAEPLESTFSLFTGTNRFDSYYDISEYGPSGKPFI
                     YFKYTKPVLVSYKDASGNELATSTRLDGSIGENYVTTPKIIDGYTLKETPGNATGQFS
                     ETLQNVTYIYEKTAVQNGTVTVKYQDESGKTLAKDTVLTGEVINTYQTKSKDIAGYKL
                     QKVEGNESGTFSTTPATVTYIYEKIANSDNTNTNGEMTDNTTLSTNDTVISSEATKKV
                     DKNTSNILPTTGDSKDALFFALGSLLTLLSTSFFFFKRS"
     gene            62377..62856
                     /locus_tag="U0308_000063"
     CDS             62377..62856
                     /locus_tag="U0308_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2315080.1"
                     /translation="MTQLVFRNGTEQDTTLILRFITELAIHEGIEKDVVATESGLHKA
                     LFQEKSAEVIIAEYEGEPVGFALFFHNFSTLLGKKGLYLEDLYIIPEMRGKGFGTKFF
                     SYLSKLALSRDCGRFEWWCLNENKSGMDFYEKIGAEKMSEWTVHRLTKAEMKKISNL"
     gene            62872..64269
                     /locus_tag="U0308_000064"
     CDS             62872..64269
                     /locus_tag="U0308_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HEM2315081.1"
                     /translation="MKWDKLLNDKRRRESGVTRSKNTDVRSAFENDFQRIVMSASFRR
                     LQDKTQVFPLEKSDFVRTRLTHSMEVSTIAKSMGNMVTHTIQEENLDKDFTKDHADKI
                     PEILACAGLLHDMGNPPFGHFGEESIREWFRDNLATITYKNKNLAEILTPQMKEDFYY
                     FEGNAQVLRVVSKLHYLFDQYGLNLTFATLNAVIKYPVSSLKVNKKQIKSKKLGYFYA
                     DESLFNEITTATEALDNRHPLTYLLEVADDIAYLNADLEDGVKKGIVNITQILKGFEE
                     VEEHNKVTAACYNELKKKSERYEGQEESFIVQQWLASNVRGQLINRSLEVFYENYDAI
                     MAGTFNDSLIDASSAEQLVQILQSLSFTYIYQDKGIVESEIAGNEIISKLLETFIPAV
                     IYYDSETPERQTAKDKRLLTLISDNYLGCYRKNAEGESETMKLYLRLLLVTDFICGMT
                     DSYAKDLYQRLNGLS"
     gene            64462..64875
                     /gene="rpsL"
                     /locus_tag="U0308_000065"
     CDS             64462..64875
                     /gene="rpsL"
                     /locus_tag="U0308_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEM2315082.1"
                     /translation="MPTINQLVRKPRQSKIKKSTSPALNKGLNSFKRELTDVNSPQKR
                     GVCTRVGTMTPKKPNSALRKYARVRLSNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKD
                     LPGVRYHIVRGALDTAGVENRGQSRSKYGTKKPKK"
     gene            64906..65376
                     /gene="rpsG"
                     /locus_tag="U0308_000066"
     CDS             64906..65376
                     /gene="rpsG"
                     /locus_tag="U0308_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013054923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEM2315083.1"
                     /translation="MPRKGPVAKRDVLPDPIYNSKLVTRLINKMMVDGKRGKSQAILY
                     SAFDIIAQETGKDPMEVFEQAMKNIMPLLEVKARRVGGANYQVPIEVRADRRSTLGLR
                     WLVNYARLRGEKTMEVRVAREIMDAANNTGASVKKREDTHKMADANRAFAHYRW"
     gene            65442..67529
                     /gene="fusA"
                     /locus_tag="U0308_000067"
     CDS             65442..67529
                     /gene="fusA"
                     /locus_tag="U0308_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEM2315084.1"
                     /translation="MAREFSLEKTRNIGIMAHIDAGKTTTTERILFYTGRIHKIGETH
                     EGASQMDWMEQEQERGITITSAATTAQWKGYRVNIIDTPGHVDFTVEVERSLRVLDGA
                     VAVLDAQSGVEPQTETVWRQATTYGVPRVVFVNKMDKIGADFLYSVGTLHERLAANAH
                     PIQLPIGAEDTFEGIIDLIEMNALYYEDDLGNDPHIKEIPADLKDLADEYRGKLVEAV
                     AELDEELMMKYLEGEEITKEELKAGIRKGTLNVEFYPVVCGTAFKNKGVQPMLDAVLD
                     YLPAPTDVPAINGVLPDGEEAARHADDSEPFSSLAFKVMTDPYVGRLTFFRVYSGTLN
                     SGSYVQNSTKGKRERVGRILQMHANHREEISIVYAGDIAAAVGLKDTTTGDTLCDEKE
                     QIILESMEFPEPVIQVAIEPKSKADQDKMGQALAKLAEEDPTFRAETDQETGQTLISG
                     MGELHLDILVDRMRREFRVEANVGDPQVSYRETFRKSAQVEGKFVRQSGGRGQYGHVW
                     IEFGPNEEGKGFEFENAIVGGVVPREYIPAVQAGLEGALDNGVLAGYPLIDIKAKLYD
                     GSYHDVDSNEMAFKVAASMALRNAAKKCDPVILEPMMAVEVVIPEEYLGDIMGNITSR
                     RGRVDGMEARGNAQVVRAFVPLANMFGYATHLRSGTQGRGVYTMQFDHYEEVPKSIAE
                     EIIKANGGNNKED"
     gene            67638..68825
                     /gene="tuf"
                     /locus_tag="U0308_000068"
     CDS             67638..68825
                     /gene="tuf"
                     /locus_tag="U0308_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEM2315085.1"
                     /translation="MAKEKFDRSKPHVNIGTIGHVDHGKTTLTAAITTVLAKKGYADA
                     QAYDQIDGAPEERERGITISTAHVEYQTDSRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKCDMVDDEELLELVEMEIRDLLTE
                     YEFPGDDIPVIKGSALKALQGEADWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDV
                     FSITGRGTVATGRVERGQVKVGDEVEVIGIEEESKKVVVTGVEMFRKLLDYAEAGDNI
                     GALLRGVAREDIQRGQVLAKPGSITPHTNFKAETYVLTKEEGGRHTPFFNNYRPQFYF
                     RTTDVTGIVTLPEGTEMVMPGDNIELAVELIAPIAIEDGTKFSIREGGRTVGAGVVSN
                     ISK"
     gene            68980..71046
                     /locus_tag="U0308_000069"
     CDS             68980..71046
                     /locus_tag="U0308_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2315086.1"
                     /translation="MVQFDARNMALLESLVVANVYLAPEKLQEELGISKRTLQYDVEK
                     INKELDNIGLDGIQSVRGQGYYLLEDEKSTIKEILGNREASHKVFSASERRIRILFFL
                     LVTDARVIIDTINECNEVSRNTSLQDIKQLKLALKQFNLELAYDRKNGNMVLGDERSI
                     RQFFIHYCMNNEEIATADQLLDLMKINPMIKNQELFPKLDTIFEILAVTEKKIGIRYT
                     DEVLERIGIMIFFFKERMKRNCYLNEQEEHEVESFEIAQEIYQQLQQSENFKINHAEI
                     TYLGKLLLGASRLNDDAAAEGKLDLIVEKIIAEFERLACVNFEDHRNLKKDLLLHLQP
                     AYYRLKFQIEWINPLRTDIKQSYSDVYEITKKSLEPLEDLLGETIPEDEIAYVTILFG
                     GYLSRKNNTLVERKKLLIVCSKGVGTSRMIERQLSQLLGERVEILEPISIREFEKGLY
                     APDFIVSTLPIMEPKAPVFIVSPILTEAQKQQLMKAIAPHILQKDSDARMLSSVLDVV
                     DQYAKVEDREKLAAKLKSVLFQVQSDSQLEKSPTLEELLPKERITFKESVADWREAIL
                     VASKSLQQEGYISRNYQHAMIENIEKLGPYIVIAPGIALPHASVDDGAYRVGMSLLRL
                     NQPVSFSSKAKDQVKLIIVLASIDSYTHINALSQLTNLIMKHHLLEQIEQATSAAEIA
                     AMLTIQ"
     gene            71239..71673
                     /locus_tag="U0308_000070"
     CDS             71239..71673
                     /locus_tag="U0308_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2315087.1"
                     /translation="MSFLDKELVNLHGSAKNADEAIVQAGELLVNAGYVSEQYVEKMV
                     ESYHENGAYFVIAPQIAIPHARPTDGVENSAVSLVVLKEGVNFGHAANDPVRLVFGLA
                     ATSSEAHLKVIQKIVSLLSNNDNIEKLIHSEDYQAIGELVEG"
     gene            71676..71948
                     /locus_tag="U0308_000071"
     CDS             71676..71948
                     /locus_tag="U0308_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2315088.1"
                     /translation="MKILAVCGLGQGTSLILRMNVETVLRDMGVDADVEHIDVSAARS
                     MNVDIIVTSQELAETLGTDTSAKVVIVNNYFDNAEIKTALSEAINS"
     gene            71975..73273
                     /locus_tag="U0308_000072"
     CDS             71975..73273
                     /locus_tag="U0308_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HEM2315089.1"
                     /translation="MEIITWIANNFFGTPAILLGFIVLLGLLLQKKNLSQVISGTFKA
                     IIGFLIINAGAAVITGSLGIFEPMWKEVFGLETPPLAGFLGQEAFNAKFGSAVTLAMT
                     LGFLVNVLLARFTPFKYIYLTGHMMFWTTTIFAGITVQAVGGDIPFWGLVLFLAVIMG
                     LYWTLQPAITQPFLRKITGNDNVALGHTSSSVAILSALLGKVFGNKKNDAEHINLPKK
                     LEFLRDSNVITALTMGILFVVGAVILMVKKTPGAEKLIAEAGNQSFIVYSIVQSFTFA
                     AGIAIVLVGVRMFIGEIVPAFNGIATKLVPGAKPALDAPIVYPYAPNSVIIGFVGAFI
                     GAIIWLVVLGNTVGYVFVPTMIVLFFHGAVAGVFGNSTGGVRGALIGGFLTATVVAWG
                     QYIMVTFFINTTVPDTAMWAADSDMFILGPIVSMLAKLFF"
     gene            73343..74335
                     /locus_tag="U0308_000073"
     CDS             73343..74335
                     /locus_tag="U0308_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotriesterase"
                     /protein_id="HEM2315090.1"
                     /translation="MSFIRTFYGDIAPEQLGFTYSHEHIVCVPAYWQERDADDLLLDD
                     KEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFNKSFLWD
                     GKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYN
                     MITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDR
                     NLDPYYHKQVAKTGAFMSFDGIAKIKYAPESARIAAILYLVSEGFEDQILVSGDTARK
                     TYYKHYGHGPGLEYIAKKWVPRFIDEANEKGFDGEKLVKKFFVDNPARCFTFKK"
     gene            74348..75097
                     /locus_tag="U0308_000074"
     CDS             74348..75097
                     /locus_tag="U0308_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEM2315091.1"
                     /translation="MLYADENSFDIGAKITKTKPVLLPIGAVEAHGPHLPLGTDNILA
                     SEYSAKIAAETSGFVLPVLPYGQVWSLQDFPGSLTLSNETVTKVVVEIGESLYKQGFR
                     LFVPVSGHLGNMAALKDAARELYAKYPDMVILHIFYPNIQKLAMDVREGNANHHTYIH
                     ACEIETSLMLYLSPENADMSRAIDDPPILPIDADFTPTPWQNFTKTAVLGEATLATAE
                     KGEYLIEKTLKTCVELIKLEQEKIRKSTEME"
     gene            75057..75776
                     /locus_tag="U0308_000075"
     CDS             75057..75776
                     /locus_tag="U0308_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxo-acid lyase"
                     /protein_id="HEM2315092.1"
                     /translation="MNKKKFENLPKWNNFALFNFLAKDKENSLEVMEAARGFAVPGIV
                     ATNYETAEEAANVVKELQTTAPVISVGLGGGGDWQNWRDVLHIARLAPNSHINQPIET
                     AGLTNDLLPETYTNALVRPTGKIGIVKLSSGDEITAEEAVDYCLSANIPSIKFMSIEG
                     TKYLDELVYLTKIAADKGIYGIEPAGGIGADNILEITTAIKSTGIPFYMPHIFGKTID
                     KATGRTKPEEIEKIFAALEGN"
     gene            75777..76520
                     /locus_tag="U0308_000076"
     CDS             75777..76520
                     /locus_tag="U0308_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008475644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar isomerase domain-containing protein"
                     /protein_id="HEM2315093.1"
                     /translation="MINNYIDITVRLLENILDNEADYVKEAGAKVAESIENDGVIHLF
                     GCGHSHILTEEVFYRAGGLAAIHPILHEPLMLHEGAAASSVLERKNDYAKTFMAEEDI
                     RPGDIMIVLSTSGRNPVPIDVAEIAREKGAFVIVITSLQYSASQKSRHTSGKRLSDTG
                     DIVIDNGAVKGDAVLKSANFDIAFAPTSTVTGAVILQSIFAEAIETMVNDNFTPPVFI
                     SGNVENADAHNQALVDKYNERIPLLGMNL"
     gene            76626..77612
                     /locus_tag="U0308_000077"
     CDS             76626..77612
                     /locus_tag="U0308_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4003 domain-containing protein"
                     /protein_id="HEM2315094.1"
                     /translation="MDSAYVFDSEQATKLLMKNYELVKTSGVSFIDKRIRFLIARLFA
                     GNNEVVNPEEFSEINKEIKRQLGMFTALNGNVRASLVGLLMANDNASRESVQQVIANY
                     NTLIQAGFQRTEYTYFAAYLLLESENPKKTAQKAKTIHQLFKKDHPFLTKSEDVTTAV
                     FLANLPEENTTKLAEITEYYFQEFAAKGFRKNDSLQFLATTGTLLYGEKDSKFIRRVD
                     NIVEELRQKGIKVKPLHYSSIGILAFVMDARKIDSGLVNLIDELQQQPGLRFGREFVT
                     ALAISLYTEKQSGQMSKEQLEGLMVNVHILIAMEQAAAVSAAAAASAAAASS"
     gene            complement(77659..78990)
                     /locus_tag="U0308_000078"
     CDS             complement(77659..78990)
                     /locus_tag="U0308_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide phosphodiesterase"
                     /protein_id="HEM2315095.1"
                     /translation="MIRFFKIVTPILLSISLVACSSASGKTENITAPIEKDRNLSMVV
                     TTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVEAKKTDVLIISGDL
                     TNNGEKTSHEELAKKLTQVEKTGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTD
                     FSKIYGDFGYKDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGTPTTEGGLTA
                     GTLDWIKESSALAKKNGAKLVPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGSMDF
                     SLSGHIHTQNIRSAKSTDGKEITDIVTNALSVFPHKYGNITYSAKNKNFTYQSQKLDM
                     EAWAKAQGSTDENLLNFNQFDYETFYNSGYDKAMMDLMTDESYDKYNQADKEKMADTM
                     GLNNMYFFAGTAPPKSDGMALWDSAPNSFLKDYVLSSSNPPKKSNDYYVSP"
     gene            complement(79080..80060)
                     /locus_tag="U0308_000079"
     CDS             complement(79080..80060)
                     /locus_tag="U0308_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEM2315096.1"
                     /translation="MQLHAMWDEYPALSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIH
                     AGGKLLRPAFALLSAQAGPDYDKERAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPT
                     IHSKYGRNYAVYTGDYLFCICFKILSAHASSVENIEFNSKNIEKILMGELDQMRTSYK
                     MNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDV
                     LDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMKGHLAEFEPLLSQKLDMTDEASEQVLA
                     LISKYKGVEQAFKLANKYTNKALREIKKLPAGAYRDDMYRLTKNILDRDI"
     gene            complement(80082..80624)
                     /gene="eetB"
                     /locus_tag="U0308_000080"
     CDS             complement(80082..80624)
                     /gene="eetB"
                     /locus_tag="U0308_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin-based extracellular electron transfer
                     system protein EetB"
                     /protein_id="HEM2315097.1"
                     /translation="MTKNRRLVYIALLAAQAVVISLLERAIPFPFAFAPGAKLGLANI
                     ITCISLYTLSAKDTFMIICIRLVLSTLLGGTISTFMYSAAGAILSFLGMWLVQQLGPK
                     RVSIIGVSVTGGILHNVGQLVIASWIAGTWSVMLYLPVLSFIGILSGIAVGIAANYLL
                     KNVQTLRMFADAKQSQAAQK"
     gene            complement(80657..81091)
                     /gene="eetA"
                     /locus_tag="U0308_000081"
     CDS             complement(80657..81091)
                     /gene="eetA"
                     /locus_tag="U0308_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin-based extracellular electron transfer
                     system protein EetA"
                     /protein_id="HEM2315098.1"
                     /translation="MKKYLSMVKRWDIIIILSLCILSFLPIAIFSYVKANEPAPANGK
                     KELVAVISVDSKEYKTVTLTGHKGTESFDVKQPDGHTNTIEVSGEEIRISKANCNDQV
                     CVRTGAIDKQGDTVVCLPHKLVIEVKASDGSSGDSDDPIISS"
     gene            complement(81267..83153)
                     /locus_tag="U0308_000082"
     CDS             complement(81267..83153)
                     /locus_tag="U0308_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEM2315099.1"
                     /translation="MPEKNIVLIGAGYAGVHAAKKLAKKYKKDKDVNITLIDRHSYHT
                     MMTELHEVAGGRVEPTAIQYDLRRLFNRTKVNLVTDNVTHVDHDKKVVTTEHGSYPFD
                     YLVLGMGGEPNDFGTPGVGENGFTLWSWEDSVKLRNHIEETVTKASREQDVEKRKAML
                     TFVVCGSGFTGIEMVGELLEWKDRLAKDNKIDASEIKLVVVEAAPTILNMLERRDADK
                     AERYMVKKGIEIMKNAAIVEVKPESIVLKSGEELPTSTLIWTAGVRANSDTKDYGMES
                     ARAGRLKVNQYMEAEGLKDVYVVGDLAYFEDEEGKPTPQIVEGAEQTALTAAKSIIVE
                     MSGTGEKEPFQGKYHGVMVSIGAKYGVAHLGGMHLSGWFAILMKHMVNLYYFFGIRSG
                     YYMWQYIMHEFFHIKDHRNIFRGWTSRYGNVLWVLPLRVYLGWFWIDEALSKIYGETT
                     WDKVSITNLKPLFNGIGSDSWLTATTSKMPFEWLQTAATSGASQAAGDAAGAAATNVT
                     TPILSHMPGWFQWIMELLMPNLDVALVMQKVVPFVELAIGLAMVVGLFTWLVSIGSAG
                     FLVMFTLSAMLGWDKFWALPASIALLNGAGRTFGLDYWAVPWFQKHLGHWWYGKPRSV
                     YRDK"
     gene            83601..84500
                     /locus_tag="U0308_000083"
     CDS             83601..84500
                     /locus_tag="U0308_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein"
                     /protein_id="HEM2315100.1"
                     /translation="MKLKKVAMGITVVMASSLLLVGCGSSDDSSKDKKSTDTKQTETK
                     KTAKTDGTMTDGTYKLEEKNFDDKGWKGFMSIEVKDGKITKANYDYKNKDGKLKSEDA
                     DYEKAMKDKVGTGPQEYLKQLSDSLVKNQSAASVEVVSGATHSSDAFINYANQLIQAA
                     QKADTTTISINNLAKMEDGTYKLEEQNYAHGYRVVFSMDVKDGKITKSDYNYVDKDGK
                     LKSDDADYEKNMKAKSGTGPKEYIPALNKSLVEKQDVAAVDTVSGATNSSNQFKIYAA
                     QLQNAAQNGNTDTIKVYNLVEAE"
     gene            84664..85746
                     /locus_tag="U0308_000084"
     CDS             84664..85746
                     /locus_tag="U0308_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEM2315101.1"
                     /translation="MKKWKIIISVIILALVVSACGNSSKETKSEPSDSKKLMDQPYSK
                     TDFLMGTVVTLKIYDKGKEDVLDKGFDRIKDLAAKITTSDSEKTSEVDKINEQAGKKP
                     VKVSKDVYYLIQEGLKYSENSGGSFDITIGPLTSLWHIGFSDARKPSQAEIDAVLPLI
                     NYKDVKMNDKDQTVYLEKEGMELDLGAIAKGFITDETLKVFKENKVTTSIIDLGGNIY
                     VQGNNPNGNKWNVGIQDPFSPRGSVIGKLPESNMSIVTSGIYERYLEVDGKTYHHILD
                     PKTGYPFDNDIAGVSIVSKKSIDGDGLSTATFSKGVKGGMDYIEQFEGVDAIFISKEK
                     KVYETSGLKGQFELTDKDFQMDTLKK"
     gene            85828..86787
                     /gene="menA"
                     /locus_tag="U0308_000085"
     CDS             85828..86787
                     /gene="menA"
                     /locus_tag="U0308_000085"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HEM2315102.1"
                     /translation="MSIPSFLKLVEIQTKIASVFPFMLGTLFVVYQYDMFKPVNTLIF
                     FGSMLIFDLTTTAINNYMDYRKATDNHDYDYRTTSNVIGQEQIPVRTVIITIFLMFFI
                     ATGLGVWLVFRTDLLVLLIGFVCFCIGILYTFGPVPLSRMPLGEIFSGVTMGFGIFFL
                     AVYVNAYDAGIANLLWQGETVTIQFNLIEIIRIGVVSLPCIFTIANIMLANNLCDLDE
                     DIRNHRYTLPYYIGRKMGVLLFNALYYASFLAVVVSVAINFLHPIMLLSLITIYPVYR
                     NLVKFNKEQVKSKTFVIGIRNFVLINATLTILMAVSVVLQQLA"
     gene            86808..87608
                     /locus_tag="U0308_000086"
     CDS             86808..87608
                     /locus_tag="U0308_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HEM2315103.1"
                     /translation="MIEKLILGRFVPGESLIHGLDARTKLLAGFYYIGILFLANNWWT
                     YALMVLFTLMVIQMTGIKLKVFIKGVKPLIWLILFTVVMQILFASGGTIYFDWGPFTI
                     SSFGLLNGVFVFLRFVLIIMMSTVITLTTTPMNLTDAIAYILRPFAVLKVPVNDIALM
                     ISVALRFIPTLMGETDKIMKAQRARGVDFGEGNLFEQMKVVVPIFIPLFVSSFNRAEE
                     LADAMEARGYQGGEGRTRFRILHWHFGDLIAACVMILLTAGLVILRTS"
     gene            87970..88278
                     /gene="rpsJ"
                     /locus_tag="U0308_000087"
     CDS             87970..88278
                     /gene="rpsJ"
                     /locus_tag="U0308_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001118669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEM2315104.1"
                     /translation="MAKQKIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPT
                     EKSIYTVLRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSGVDIEIKL
                     "
     gene            88313..88942
                     /gene="rplC"
                     /locus_tag="U0308_000088"
     CDS             88313..88942
                     /gene="rplC"
                     /locus_tag="U0308_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEM2315105.1"
                     /translation="MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETD
                     GYEAVQIGFEDKRAILSNKPEQGHVAKANTTPKRFIREFRDVNLDEYEIGAEVKVDVF
                     AEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKLL
                     PGRMGGEQITIQNLEIVKVDVEKNVLLVKGNVPGAKKALVQIKTATKAK"
     gene            88968..89591
                     /gene="rplD"
                     /locus_tag="U0308_000089"
     CDS             88968..89591
                     /gene="rplD"
                     /locus_tag="U0308_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEM2315106.1"
                     /translation="MPKLSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASL
                     RQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLP
                     KKVRRLAIKSILSSKVNEEKLVVLEGLTFDAPKTKEFAAFLKNISVDTKALIVVAGES
                     ENVELSARNLQGITVIPAESISVLEVAKHDKLIITKAAVEKVEEVLA"
     gene            89591..89875
                     /gene="rplW"
                     /locus_tag="U0308_000090"
     CDS             89591..89875
                     /gene="rplW"
                     /locus_tag="U0308_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEM2315107.1"
                     /translation="MDARDIIKRPVVTEESTSILDDKKYTFEVDTRATKTQVKYAVEE
                     IFDVKVAKVNVMNYKGKLKRMGRYAGYTNKRRKAIVTVTADSKEIQFFEV"
     gene            89916..90749
                     /gene="rplB"
                     /locus_tag="U0308_000091"
     CDS             89916..90749
                     /gene="rplB"
                     /locus_tag="U0308_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEM2315108.1"
                     /translation="MAIKKYKPTTNGRRHMTSSDFAEITTSTPEKSLLRPLKKKAGRN
                     NQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADGEKR
                     YIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGT
                     SAQVLGKEGKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRSRWMGKRP
                     TVRGSVMNPNDHPHGGGEGKAPIGRKSPMSPWGKPTLGYKTRKKNNNSDKFIVRRRKK
                     K"
     gene            90837..91115
                     /gene="rpsS"
                     /locus_tag="U0308_000092"
     CDS             90837..91115
                     /gene="rpsS"
                     /locus_tag="U0308_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000533765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEM2315109.1"
                     /translation="MGRSLKKGPFVDDHLMKKVEAAAESEKKQVIKTWSRRSTIFPTF
                     VGQTIAVYDGRKHVPVYVQEDMVGHKLGEFAPTRTYRGHAGDDKKTKR"
     gene            91136..91492
                     /gene="rplV"
                     /locus_tag="U0308_000093"
     CDS             91136..91492
                     /gene="rplV"
                     /locus_tag="U0308_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEM2315110.1"
                     /translation="MASEVTSAKAVAKTVRIAPRKARIVIDLIRGKQVGEAIAILKYT
                     PRSASPIIEKVLKSAIANAEHNYDLDINNLVVEEAFVDEGPTLKRFRPRAQGRASAIN
                     KRTSHITVVVSEVKEG"
     gene            91496..92152
                     /gene="rpsC"
                     /locus_tag="U0308_000094"
     CDS             91496..92152
                     /gene="rpsC"
                     /locus_tag="U0308_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEM2315111.1"
                     /translation="MGQKVHPIGMRIGVIRDWDSKWYAEKDYADFLHEDLRIRDYVAK
                     RLSDASVSRVEIERAANRVNITIHTAKPGMVIGKGGSEVEALRKNLNELTQKRVHINI
                     VEIKRADLDAKLVAENIARQLEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGAD
                     IARAEHYSEGTVPLHTLRADIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK
                     "
     gene            92155..92589
                     /gene="rplP"
                     /locus_tag="U0308_000095"
     CDS             92155..92589
                     /gene="rplP"
                     /locus_tag="U0308_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEM2315112.1"
                     /translation="MLVPKRVKYRREFRGNMRGRAKGGTEVAFGEYGLQAVEASWITN
                     RQIEAARIAMTRYMKRGGKVWIKIFPHKSYTSKPIGVRMGKGKGAPEGWVSPVKRGKI
                     MFEIAGVPEDVAREALRLAAHKLPVKTKIVKREEIGGEANES"
     gene            92579..92770
                     /gene="rpmC"
                     /locus_tag="U0308_000096"
     CDS             92579..92770
                     /gene="rpmC"
                     /locus_tag="U0308_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEM2315113.1"
                     /translation="MKANDIRDLSTTEIQDQEKALKEELFNLRFQLATGQLENTARIR
                     EVRKAIARMKTIVRERELA"
     gene            92798..93061
                     /gene="rpsQ"
                     /locus_tag="U0308_000097"
     CDS             92798..93061
                     /gene="rpsQ"
                     /locus_tag="U0308_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011064531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEM2315114.1"
                     /translation="MADRNQRKVYTGRVVSDKMDKTITVVVETYKKHGLYGKRVKYSK
                     KFKAHDENNIAKTGDVVRISETRPLSATKHFRLLEVVEEAVII"
     gene            93141..93509
                     /gene="rplN"
                     /locus_tag="U0308_000098"
     CDS             93141..93509
                     /gene="rplN"
                     /locus_tag="U0308_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012727667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEM2315115.1"
                     /translation="MIQQESRMKVADNSGAREVLTIKVLGGSGRKTANIGDVVVCTVK
                     QATPGGVVKKGEVVKAVIVRTKSGARRQDGSYIKFDENACVIIRDDKSPRGTRIFGPV
                     ARELRENNFMKIVSLAPEVL"
     gene            93547..93858
                     /gene="rplX"
                     /locus_tag="U0308_000099"
     CDS             93547..93858
                     /gene="rplX"
                     /locus_tag="U0308_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEM2315116.1"
                     /translation="MHVKKGDKVKVITGKDKGKSGKVLAAFPKKDRVLIEGINMVKKH
                     TKPSNINPQGGILNVEAPIHVSNVMLIDPKTGEPTRVGYEVKGDKKVRVAKKSGEVID
                     K"
     gene            93885..94424
                     /gene="rplE"
                     /locus_tag="U0308_000100"
     CDS             93885..94424
                     /gene="rplE"
                     /locus_tag="U0308_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEM2315117.1"
                     /translation="MNRLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDAT
                     ANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDK
                     LVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYDQVSKVRGMDVVIVTTA
                     KSDEESHELLTQLGMPFQK"
     gene            94456..94641
                     /locus_tag="U0308_000101"
     CDS             94456..94641
                     /locus_tag="U0308_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011245027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HEM2315118.1"
                     /translation="MAKKSMIAKQKRTPKYAVQAYTRCERCGRPHSVIRKFKLCRICF
                     RELAYKGQIPGVKKASW"
     gene            94672..95070
                     /gene="rpsH"
                     /locus_tag="U0308_000102"
     CDS             94672..95070
                     /gene="rpsH"
                     /locus_tag="U0308_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003241998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEM2315119.1"
                     /translation="MVMTDPIADFLTRIRNANMVKHDKLELPASKIKKEIAEILKREG
                     FIRDVEYIEDDNAGTIRVFLKYGATGERVITGLKRISKPGLRVYAKSTEVPKVLNGLG
                     IAIVSTSQGVLTDKEARAKQVGGEVLAYVW"
     gene            95101..95637
                     /gene="rplF"
                     /locus_tag="U0308_000103"
     CDS             95101..95637
                     /gene="rplF"
                     /locus_tag="U0308_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEM2315120.1"
                     /translation="MSRIGKKTIVIPAGVTVTLNGSTATVKGPKGELVKEFNPEITIN
                     IEGNEINVSRPTDNKNHRALHGTTRAILNNMVVGVSEGYEKKLELIGVGYRAQKQGDK
                     LVLNVGYSHPVEFVAPKGVDIEVPANTQVIVKGYNKEHVGELAANIRAVRPPEPYKGK
                     GIRYEGEHVRRKEGKTGK"
     gene            95677..96036
                     /gene="rplR"
                     /locus_tag="U0308_000104"
     CDS             95677..96036
                     /gene="rplR"
                     /locus_tag="U0308_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEM2315121.1"
                     /translation="MITKIDKNKVRKKRHARVRSKISGTESRPRLNVFRSNKNIYAQI
                     IDDVNGVTLASASNLDKDFGSAESKVDAASKVGELVAKRASEKGITSVTFDRGGYLYH
                     GRVKALAEAARENGLEF"
     gene            96058..96561
                     /gene="rpsE"
                     /locus_tag="U0308_000105"
     CDS             96058..96561
                     /gene="rpsE"
                     /locus_tag="U0308_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEM2315122.1"
                     /translation="MPEQIDGNKLDLEERVVTINRVAKVVKGGRRFRFTALVVVGDKN
                     GHVGFGTGKAQEVPDAIRKAVEDAKKNMVLVPTVDTTIPHTVVGHFGGGEILLKPASA
                     GSGVTAGGPVRAVLELAGVADVSSKSLGSNTPINMVRATIDGIKQLKNAEDVAKLRGK
                     TVEELLG"
     gene            96578..96757
                     /gene="rpmD"
                     /locus_tag="U0308_000106"
     CDS             96578..96757
                     /gene="rpmD"
                     /locus_tag="U0308_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEM2315123.1"
                     /translation="MAKLEITLKRSLIGRPQPQRKTVQALGLGKTNSVVVKEDNPAIR
                     GMITKVSHLVDVKEV"
     gene            96813..97253
                     /gene="rplO"
                     /locus_tag="U0308_000107"
     CDS             96813..97253
                     /gene="rplO"
                     /locus_tag="U0308_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEM2315124.1"
                     /translation="MKLHELKPSEGSRKERNRVGRGTGSGNGKTSGRGHKGQKARSGG
                     GVRLGFEGGQLPLFRRIPKRGFTNINRKEFAIVNLDVLNRFEDGTEVTPELLVETGII
                     RNEKSGIKILSNGNIEKKLTVKANKFSAAAKEAIEAAGGKTEVI"
     gene            97253..98548
                     /gene="secY"
                     /locus_tag="U0308_000108"
     CDS             97253..98548
                     /gene="secY"
                     /locus_tag="U0308_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEM2315125.1"
                     /translation="MFQTLVNFFKVADIRKKILFTLAMLVIFRIGTFVPVPGVNAAAL
                     QSSMDGGILGFLNTFNGGALKNFSIFAMGVMPYITSSIIVQLLQMDVVPKLTEWSKQG
                     EMGRKKLNQLTRYMTIGLGLVEAFGMAYGFNRMSSAGLVIEPSIGRYAIIAIVLTTGT
                     MFLMWLGEQITVKGVGNGVSIIIFAGIVARIPDGVRQLYVSQIENAGDQLFLHVLTLV
                     GVGIAILAIVVAVIFFQQALRKIPIQYSKRVAGAKQSGAQATHLPLKLNSAGVIPVIF
                     ASAFIITPQTILTFFDQSNDVVKVLKDVFDYTKPIGMILYVALIVAFTYFYAFIQVNP
                     EKVADNLKKQGGYIPSKRPGRETQAYLTSVLYRLTFVGAIFLSAVAILPTIGTTVFSL
                     PQSLAVGGTSLLIVIGVALDTTKQLEGQLVKRNYRGFIK"
     gene            98608..99255
                     /locus_tag="U0308_000109"
     CDS             98608..99255
                     /locus_tag="U0308_000109"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEM2315126.1"
                     /translation="MKLVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTE
                     LGKKAKSFMDNGDLVPDEVTNGIVRERLAEDDAKNGFLLDGFPRTVEQAEELENILND
                     LGTELDAVINIEVDKDVLMKRLTGRWICRTCGKTYHEIYNPPKVPGKCDLDGGELYQR
                     DDDKKETVEKRLNVNMKQTKPLLDFYSEKGKLHNINGEQDIKDVFVDVEKILASF"
     gene            99642..99860
                     /gene="infA"
                     /locus_tag="U0308_000110"
     CDS             99642..99860
                     /gene="infA"
                     /locus_tag="U0308_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEM2315127.1"
                     /translation="MAKEDVIEVEGVVQETLPNAMFNVELENGHKVLATVSGKIRMHY
                     IRILPGDKVTVELSPYDLTRGRITYRFK"
     gene            99964..100077
                     /gene="rpmJ"
                     /locus_tag="U0308_000111"
     CDS             99964..100077
                     /gene="rpmJ"
                     /locus_tag="U0308_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEM2315128.1"
                     /translation="MKVRPSVKPMCEKCKVIRRKGKVMVICENPKHKQKQG"
     gene            100096..100461
                     /gene="rpsM"
                     /locus_tag="U0308_000112"
     CDS             100096..100461
                     /gene="rpsM"
                     /locus_tag="U0308_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012748902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEM2315129.1"
                     /translation="MARIAGVDVPREKRIVISLTYIYGIGKQTAKEVLAEAGVSEDTR
                     TRDLTEEELGKIREILDRIKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNT
                     KNNARTRKGPSKTVAGKKK"
     gene            100484..100873
                     /gene="rpsK"
                     /locus_tag="U0308_000113"
     CDS             100484..100873
                     /gene="rpsK"
                     /locus_tag="U0308_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEM2315130.1"
                     /translation="MARKTNTRKRRVKKNIESGIAHIRSTFNNTIVMITDTHGNALAW
                     SSAGSLGFKGSRKSTPFAAQMAAESAAKSAQEHGLKTLEVTVKGPGSGREAAIRALQA
                     AGLEVTAIKDVTPVPHNGCRPPKRRRV"
     gene            100983..101927
                     /locus_tag="U0308_000114"
     CDS             100983..101927
                     /locus_tag="U0308_000114"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003178382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEM2315131.1"
                     /translation="MIEIEKPKIETIEISDDAKYGKFVVEPLERGYGTTLGNSLRRIL
                     LSSLPGAAVTSIQIDGALHEFSVIEGVVEDVTTMILNIKKLALKIYSDEEKTLEIDMQ
                     GPGVVTAADINYDSDVEILNPDLHIATLSDNAKFHVRLNATRGRGYTPADQNKRENMP
                     IGVLPVDSIFSPVIRVNYQVENTRVGQSTNYDKLTFDVLTDGSISPEEAVSLGAKILS
                     EHLSIFVNLTDEAQKAEIMIEKEESHKEKVLEMTIEELDLSVRSYNCLKRAGINTVQE
                     LADKSEDDMMKVRNLGRKSLEEVKVKLADLGLSLRNEN"
     gene            101944..102351
                     /gene="rplQ"
                     /locus_tag="U0308_000115"
     CDS             101944..102351
                     /gene="rplQ"
                     /locus_tag="U0308_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEM2315132.1"
                     /translation="MGYRKLGRTSSQRKALLRDLATDLIVFERIETTEARAKEIRKVV
                     EKLITSGKKGDLHARRQAAAFIRHEVVEVVQVDAKGKDGSTVKKNRPVYALQKLFDDV
                     APRYAERQGGYTRILKKGPRRGDGAPMVIIELV"
     gene            102566..103660
                     /locus_tag="U0308_000116"
     CDS             102566..103660
                     /locus_tag="U0308_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding domain-containing
                     protein"
                     /protein_id="HEM2315133.1"
                     /translation="MRSLTNAEIAHNRLLNSGLLQSKFSSAEDATRALFGIQSQYQQF
                     GEISLFNRVPNLTKENLQMAYDDKGIIKIWGQRMTVHMYTPDDWFYVHDVYANKNNWL
                     RKHADSLGRDLDEILVQMEELLLREDKVSKESFAALLGNEAKELMTWGGVFIQGSLDG
                     KLFCVPESPKTKFYSHRNQIDSEREDAWITNKRSKTGLETMIDRYFSAFGPATIQDFK
                     HWSGLRNSDYIETLEKLLENYICYIGEDGKNYYSKAKTQENVEMGSPLLLGKFDPLFV
                     SYAKKNWLASEKETSLIWRTAGQIEAVLIINAQFFGTWRYKISGDKIVFQFYLSKKLT
                     KKGQKLVEKEAIKLAEFLLKNYQGSIFEQI"
     gene            complement(103692..104582)
                     /locus_tag="U0308_000117"
     CDS             complement(103692..104582)
                     /locus_tag="U0308_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEM2315134.1"
                     /translation="MKNFVTSERAVFKMDKSAEPAITVKDGSVVKIKTKDYFNGQIQN
                     KQLQYGDLDWKQFSPTTGPIYIEEARSGDLLAVTIEKIELLGTEVFLLNGPNVGITDD
                     LLTSNYTRCYKVRENRIMYSDEIHIPITKTIGLLRTEGLLTSKSPANNDGLLDSSEIT
                     EGATIFLPVEKQGASLYIGNVRATAGFGKTTTTSAEAPAEITLRLQILKNRTAPTPTI
                     IHDNHLICLASDLTIEKAAKKAMQNMITLLTESDKMTTEDAMFLLSLQAEFQVCNMGK
                     ANITTSIKLPLDYFPEMPFL"
     gene            complement(104703..105365)
                     /locus_tag="U0308_000118"
     CDS             complement(104703..105365)
                     /locus_tag="U0308_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEM2315135.1"
                     /translation="MLADFILRLVVAGLLGAIIGLDREIRAKEAGFRTHFLVSLGSAL
                     IMIVSQYGFSEIATMQNVSFDPSRVAAQVVSGIGFIGAGTIIIQKKFVRGLTTAAGLW
                     ATAGIGLAIGAGMYWVGIAATLLTLIGLEFLSIVFKSFAFHTTAIIYSTDKQENLVKV
                     TDKIQQNKQQIVSYSSEKELIGESLFIRVNIVVKTKNKNDEYELFHFIQTLPNVTVEK
                     ME"
     gene            105496..106335
                     /locus_tag="U0308_000119"
     CDS             105496..106335
                     /locus_tag="U0308_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HEM2315136.1"
                     /translation="MAESFVRLEHVFYKYEDTEKYAVKDVSISAQKGEWVALVGHNGS
                     GKSTIAKLLNGLLFPEDGLIKIGHFVLSEKNIWDIRRQVGMVFQNPDNQFVGATVQDD
                     VAFGLENHGVPHDTMVERVESALNEVGMQSYALHEPARLSGGQKQRVAIAGVLALQPD
                     VIILDEATSMLDPRGRAEVMETIRIMREQEDITVISITHDLDEVLFADRVIVMNNGEV
                     HSEGTPQEIFEQADAMREIGLGVPFIIELQEKLVAGGFETGSTVLSEGALLDQLWKLN
                     SNN"
     gene            106311..107177
                     /locus_tag="U0308_000120"
     CDS             106311..107177
                     /locus_tag="U0308_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HEM2315137.1"
                     /translation="MEIKLEQLGYCYQKNSPFEKRALLDVNVSFDSGSYSAIIGHTGS
                     GKSTLLQHLNALLMPTEGKITVGDREIVAGVKQKKLRDLRKKVGIVFQFPEAQLFEET
                     VEKDICFGPMNFGVSEEDAKLRAKKVIYEVGLTEEILSRSPFELSGGQMRRVAIAGVL
                     AMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIVL
                     MKAGTVLQIGTPREVFAKPDELVDLGLSVPDVVRFQGLFERKFDVKLTKTCLTIDELT
                     TEMAPYLAKGGA"
     gene            107180..107977
                     /locus_tag="U0308_000121"
     CDS             107180..107977
                     /locus_tag="U0308_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HEM2315138.1"
                     /translation="MMDKMILGRYIPGNSWLHRIDPRAKITAVMAFIAIVFLANNWLT
                     YALMFAYVLYLVLTSKVPFLFFIKGLQPIFWLILITLLLQVFFTKGGTVLVDLGLLQI
                     TTLGLTNGAMMFCRFVLIIFMTTLLTLTTSPIELTDGLEKILAPFRLVHLPVHELALM
                     LSISLRFIPTLMDETEKILKAQKARGVEFTSGKWSDRIKAIIPLLVPLFISAFKRAED
                     LAIAMEARGYRGGKGRTRFRLLRWRFADTLLLISLVVLSGLLFWLRS"
     gene            107983..108729
                     /gene="truA"
                     /locus_tag="U0308_000122"
     CDS             107983..108729
                     /gene="truA"
                     /locus_tag="U0308_000122"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEM2315139.1"
                     /translation="MTRYKAIISYDGSGFYGYQVQPNTRTVQAEIEKALTKMHKGKTV
                     RITASGRTDTGVHAKGQVIHFDSELDITAEKFQKALQVMTPFDISFLTVEEVPDDFHA
                     RFGTVGKEYRYVVKRTKIFDPFSRNFALHYPYELDISKMKLASKRLIGEHDFTSFCSA
                     RTERDSKVRTLYSIDFYEEDDETLVIAFQGNGFLYNMVRILTGTLLDAGQGRISPDDI
                     SEALLARDRQKLISKTAPPQGLYLWRVDYE"
     gene            108924..109361
                     /gene="rplM"
                     /locus_tag="U0308_000123"
     CDS             108924..109361
                     /gene="rplM"
                     /locus_tag="U0308_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEM2315140.1"
                     /translation="MRTTYMAKPGEVERKWYVIDATGVSLGRLSSEVASILRGKNKPQ
                     FTPHIDTGDFVIIINAGKIGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRTNNPEKLL
                     ELSIKGMLPKNSLGRQLFKKLHVYGGAEHEHAAQQPEVYELRG"
     gene            109383..109775
                     /gene="rpsI"
                     /locus_tag="U0308_000124"
     CDS             109383..109775
                     /gene="rpsI"
                     /locus_tag="U0308_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002009728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEM2315141.1"
                     /translation="MAQVQYYGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAAL
                     REVIKQPLVATETLGNYDVLVNVHGGGYTGQAGAIRHGVARALLQVAPEYRPALKSAG
                     LLTRDPRMKERKKYGLKGARRAPQFSKR"
     gene            complement(109844..>110852)
                     /locus_tag="U0308_000125"
     CDS             complement(109844..>110852)
                     /locus_tag="U0308_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002406008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM2315142.1"
                     /translation="RAQVSLYKHGQHKKISQTFSTKKEENLWALEMELAKGEGKELAH
                     RTTTFADFFENWIYLVKVNDVKETTFQNYVRTLGIIRNLFQDIQLKDLNDIVVQKKVD
                     EYAKTHSRKTTHEVLLKIKTSLRDAYARGYIANDFARLVKTRGEKPPKRNKALSITDF
                     RKLRNYVLQHPEDEFNLLVLLALETGMQRGELLAIRPESLYEYGIKVRHSISPTSDDT
                     SLKTLNAKRDVSINKEVYELIRKIPVKEDGYIFSFGGFKQSEQLAELLKKLDIKKTTF
                     HGLRDTHASFLFAQDIDIAYVSKRLGHINIQTTQNYYLELMPEKKHQQDADALNLLSA
                     L"
BASE COUNT        34301 a        20028 c        24076 g        32447 t
ORIGIN      
        1 ttcttaacta gttcctaaat ctgtgaaaaa taaggattac atattatttt attatgcttt
       61 gtgaattaca gagcaactga acgcgtcact ttgggcggtt tttcacatga tttttaagag
      121 ggaagcacaa atcagggaac gaagcagtaa tttttagcac aaaaaggagg agaaaagggt
      181 ggataaacta tttttagccc gttttcaatt cgcatcaaca acgattttcc atttcttatt
      241 tgtaccactt tcaattggac ttgtatttat ggttgctctt atggaaacgt tgtatgtcgt
      301 gaaggggaaa gaaatttaca aaaaaatgtc gaagttttgg ggacacatat tccttattaa
      361 cttcgcagtc ggtgtcgtaa ccggtattat tcaagaattc cagtttggga tgaactggtc
      421 ggattactct agatttgttg gggacgtatt cggagcacca cttgcaatcg aagcgttact
      481 tgcattcttt atggaatcta cgtttatcgg actttggatt tttggttggg acaaacttgg
      541 caaaaaactt catttagcat gtatttggct tgtttcaatc ggaacaatta tgtctagttt
      601 ctggatttta gcagcgaact catttatgca acatccggtt ggttttgaat ttaagaacgg
      661 acgcgcagaa atgaatgact tcttgcaact tattactaat ggacaactac ttgtggagtt
      721 cccgcacgtt atattcgggg catttgccac tggggccttt ttcattgctg gtgtcagtgc
      781 gtataagatg ctcaaaaaac aagatgtcgc cttctttaaa cgatcattcc aaattgcaat
      841 ggtcatggcg gtaatcggtg gctttggtgt ggctttcagt ggtcactcac aagcacaata
      901 cttggttaaa acacaaccaa tgaaaatggc agcaacggaa gggatatggg aagatacagc
      961 tgacccagct ccgtggacga tgattgccaa gatcaaccca gaagagaaga aaaacgaatg
     1021 ggaagtcaat gtcccgtacg cgctaagttt cttatcttac ggaacattaa ctggtagcgt
     1081 ggaaggtatg aacacgctgc aaaaacaata cgaagaaaaa tatggtgaag gtgactacat
     1141 cccaccagtt aaaacagcat tttggagctt ccgtatcatg gttggcgctg gtatgttaat
     1201 gattttattc gcattaatcg gtatcgtgct tgcttggaag aaaaaactcg ttaatgcaaa
     1261 atggtattta cgtttcatga ttccaatgat tggcttcccg ttcctagcga actccatggg
     1321 ttggattatg acagaaatag ggcgacaacc atgggtagtt ttcggttaca tgaaaaccgc
     1381 tgatgccgta tcgccaaacg tttcatcagg acaaattttg ttctcgataa ttgcgttctc
     1441 gacaatttat acgattttag ccattctatt ggtttacttg tttatacgtg aaattaaaaa
     1501 aggaccagac ggacacaaac cagaaaaagc agagatttcc gtagatccgt ttgataaggg
     1561 ggatgaaagc tttgtcacta aatgagttat ggtttctatt aatcgccatc ttattcattg
     1621 gattcttctt ccttgaaggt tttgactttg gtgttgggat gtctacacga tttatggcta
     1681 gaaatgcact ggaacgccgc gtgctcgtta atacgattgg gccgttctgg gatgcaaatg
     1741 aagtttggtt actaactgca gggggcgcga ttttcgccgc tttccctaac tggtatgcaa
     1801 ccatgtttag tggttattat attccgctag tattcttatt acttgcgcta attggccgtg
     1861 gtgtttcttt tgaattccgt ggtcaaaaag attcaccgct ttggataaaa acatgggatt
     1921 gggttatttt cttcggtagt attttaccgc cattcctatt tggtgtatta tttgctagct
     1981 tgattcaagg tatgccgatt aatagtgata tggatatgta cgctgggttc tttgattaca
     2041 ttaccgtatt ctccgtatgg ggtggcgtga cgattacgct catgtgccta cttcacggat
     2101 tactatttat tactttacgt acagaagagg atattcaaga ccgtgctcgt cgtatggcga
     2161 aacgtgtttg gtttattact gtaccagctc tagtaatttt cgttgtactt gcttacttca
     2221 atactgacat gttccaagtt agacctgtac ttgtaccact gatgattgga attgtagtcg
     2281 ttatgtacgt gctatctgcc ctgtttattt ggaaagatcg tgatattttg gcatttacat
     2341 tcggcggact tggaattgtc ttcacgattg cgacgatttt cgtgtcacta ttcccacgtg
     2401 taatgatcag ttctatcaac agtgcgtttg atttaactat agaaaatgca gcttccggac
     2461 aatattcgct tagtgtgatg acgatagttg ccgttacgct actgccgttt gttcttggtt
     2521 accaaatttg gagctactat gttttccgta agcgcgtttc tagtaaggag aaaatgacgt
     2581 attaatggga aaagatttaa ggaactacaa aggaattaaa aaaataatgg cgattctcgc
     2641 agttttcacg ctagttcaag gtgctgcgat tatcgtgatg gcgataactt tagctcgtgc
     2701 gattactgac ttatttcacg agcacgcgtt tcaatcagtc acaatacaaa taggtctctt
     2761 cgcgggggcc tatttcttgc gtcacttttt gaacgtatgg aaaaaacaaa tcgtttaccg
     2821 ttacgctgca aaacttgcga aaacaatgcg ggaagagttg cttgatagtt tgtttgcgct
     2881 tggaccgcgt tttgctcgag cggaaggaac tgggaaagtt gtcacgatgg ttatggaagg
     2941 tgtagcagat ttccgaaatt acttggaact gttcttacct aaaatgatga atatggcaat
     3001 tattccagca atgatttggg tgtatattgc ttttcaagac tggacctctg cttttatttt
     3061 gatgattact ttgccgattt taattgtatt tatgattatt ctaggattag ctgcaaaaaa
     3121 acaagcagat tctcaatttg aaacgtatcg cgtgctctct aaccactttg tagattcgtt
     3181 gaagggtttg gaaacgttgc ggtatttggg gcttagtcac gaccatgaag ggaaaattgc
     3241 ttcggttagt tcgcgttatc gtaaagctac gatgaaaacg ttgcgtgtgg catttatgtc
     3301 gtcattcgcg ctagatttct ttacgatgtt atcgattgcg ctcgttgcgc tgttcctagg
     3361 tcttggtctc attgacggta acatgaattt gccaattgcg cttagtgtcc taatccttgc
     3421 gccagaatac tttttaccag ttcgtgaagt tggctcggat tatcatgcta cacttgatgg
     3481 tcaagaggct ggtcgcgtta ttcaaggaat tattgaccaa gccaaagcag aaaaaccgga
     3541 aacgaatgca ctacctttaa caacttttgc tgaaaatacg gagttttcgt ttgaaaatat
     3601 tactgtaaag catgatgtag atgctgctga ttcgcttcat gaagccagtt ttacggtaaa
     3661 aggatttgaa aaagttggga ttattggtgc gacgggcgct gggaaatcta ccttgattga
     3721 tgttttgagt ggctttttga ccccgacttc tggaggtttt cgttggaatg gggaaagtgg
     3781 tgcgtcgctt gcttcgagtg attggcaaac ccaagtcact tatattccgc aacatccata
     3841 ccttttccac gatacaattg ctggaaatat tcgcttttat catcctaact ctacagatga
     3901 ggaaatgaaa aaagcagcag aatctgccgg tttaaataag cttgtagcgg gactggaaga
     3961 tggttatgaa acgcttgtcg gagaagctgg gcggatgctg agtggtgggc aagaacagcg
     4021 tgtcgcactg gctcgtgcat tcttaacgga tcgtccaatt gtgttaatgg atgagccaac
     4081 agcccactta gatattgaaa cggaatatga gttaaaaaaa ccaatgctag acttatttga
     4141 aaatcgactt gtctttttcg cgacgcatcg tttgcactgg atgctcgaaa tggaccgaat
     4201 tattgtttta gatcacgggg ctgtcgttga aactggaacg cacgaagaat tactttcgcg
     4261 taaaggtttc tattacaatt tagtcaaagc ccaattggag gaagtatgat gcggaaaagt
     4321 agctggatta tcccatatat taaagaaaac cgcggcttgt ttttacttgt catcttcctt
     4381 ggaacactaa cttttgcctc tgctggagca cttatgttta cgtctggaca tttaatttcg
     4441 aaatcgtcct tgatgccgga atccatcatg gcggtttata tttcgacagt tggtgttcgt
     4501 gcatttggta ttatgcgctc cgtttcacgc tatgtggaac gcctttcgag ccattcgctt
     4561 gtccttcgaa ttctggaaaa gatgcgtgtt cgcttgtatc gtttacttga gccgcaagcg
     4621 ttactactaa aatcacgtta taaaactggc gatattctgg gcctcctcgc aggtgacatt
     4681 gagcatttac aaaatttcta tttaactaca atgctaccgg caattgttag cctcgtgctt
     4741 tacgcgggcg tcgttatcgc gcttggagca ttctcgattc catttgctgc gctctttgta
     4801 ctcttgattg gcctccttgt gctcgttctt ccatgggtat cacttttata tgctcgtgga
     4861 aagaatgctt atctaaaaca agggcgcaat agtttatatc aaaaatttac cgatgcagtg
     4921 tttggtatta gtgattggaa attcagtgga cgtgaaaaaa catttatttc taactacgaa
     4981 aaagacgagg cagacatgct tcgaacagaa aataaacagt ttcattttgt taattggcgc
     5041 gatttcttta gtcagttagt tgttggcttt atggttatcg tgatggttta ttggagtaca
     5101 gcagaatcac gtgatggagc attttctgga acgatgattg ccgcttttgt tttggcaatt
     5161 atggcgctag cagaagcgtt tgtaccagtt tcaagtgcta tcagtgacaa atcattatac
     5221 caagactcgc ttgctcgttt agacaaaata gaagatccga cgctaccaac ttttgaagaa
     5281 gaaacgaaag aaatagagcg aatcaacaca gaaaatgttg ttttaaaagc agaaaatcta
     5341 actttcgcgt acgatgaaaa gtcaccagaa atcttaaatg gttttgactt cacattgcaa
     5401 caaggtgaaa aagtggcgat tatcggtcga agtggaacag ggaaatcaac ttttcttaaa
     5461 ttagttcaag gagctttact gccaacagct ggaaaagtaa ctatgaacgg agttgaagtg
     5521 gagaatttaa gaccgcaaat tcctgaaatc acatcaatgt taaatcagaa agcgcacctt
     5581 ttcagtacga ccgtcttaaa caacatccgc cttggaaatc aagatgcatc ggacgaagaa
     5641 gtatacgaag cggcgaaaaa agttcagttg cacgatttta taatgagcat gccagatggc
     5701 tatcatacac aaatgagtga aatgggtgaa cgtttttcag gtggtgagcg tggtcgtatc
     5761 gctctcgctc ggattctact acaaaacaca ccaatcgtta ttttagacga accaacagtt
     5821 ggtctggacc caattacaga acgcgattta ctagcgacta tctttgaaac gttagcagat
     5881 aagtcactca tatgggtaac gcatcattta gttggtgccg aaaaaatgga ccgcgtcttg
     5941 tttttagaag agggaaaaac gttaatggaa ggacctcatg ctgaattaat ggcagaagaa
     6001 ccacgctata aacgacttta tcaactagat cgcccgattg aattataaaa ttaagccttg
     6061 ctaagtacaa tcttagcaag gtttttttgt atcgcagttt taatatttgt aacaatattg
     6121 taatttaaaa ttgactttca tcacatttct gcttattatt aaactaagca aaatgaaagg
     6181 ggaatttatt atgaaaaaat tccacgggct agtgcttact gcgttagtaa cttgtctaat
     6241 cattccattc tcattggcag caagcgctga aacaaatgaa aatggtaaca attcaacacc
     6301 tacagaagaa aaaacaacag atactactga aaacataatt actgaagaaa agccagaacc
     6361 agcagtaccg acaaaagaca cgactgtaac aacatcgcaa aaaagcaaag ttcaaacaac
     6421 gatagatatt accgattctc aagaagttta ctcgtatgaa caaaatagta agattgatct
     6481 caaagatttc accgcaacat taactgatta caccgataca aaactaacca attatcgctt
     6541 agcagccaat tctaaactaa gtactgcaca aacaggtatc caagaagtca cgctccttgg
     6601 agatagtgaa gacggcaaaa caacagcagt caaactcaat tacttagtca aagaaaaaac
     6661 ggcccaactg actattacag atatgaattt tgatttagaa acaaaaattt tcacaggtaa
     6721 aacaaaacca ttcgctagtg tatatatgag ttctccggca gatgaaaact ttggagaagg
     6781 aacaacaact gcggataaag atggttattt ttatgcagaa tgggcgacaa caccaaaaca
     6841 aattacggca tatgcttttg atgaatcggg taattatagt gaagaagtaa cctatcaagt
     6901 cccagcgaaa aaacaaaatg aagcagtcgt aacagctcca gataaagtga agaaaatcga
     6961 aacaaagaac gcggtcaaaa gcgcaacagc aaaacctgct gatgttgcaa aagttacaaa
     7021 agatgacaaa acagatttgc caagcacagg tgacaaaggt acagaatgga ttttcgtggt
     7081 agcgggtgtt atagttattc ttgtggcagt gttattactt aggaaacgta aaaaataaac
     7141 taattgctat agggaataac tcaaaaataa ggagcgaata atgaagaagt tattaagcgg
     7201 tttaattatt gttttaatgg ttagcctact tggtcactcc tttaatgccg aagcagcatc
     7261 ctacgaaaaa atcatttatg acaaagcagt taatctaaaa ggggtagtaa atcagtcaaa
     7321 acgaaatgat ggtattaata gcaagatgta caaaacgagt agtagtgtta agtacctcgg
     7381 ttcagctaag aaatatgaca agaagacgtt gattattacg cgcgaaggaa aaacagcaag
     7441 agctaaatgg tattattgta agctaggaaa tactacaatc ggatggattg actcgcgtgc
     7501 ctttacgaat gtcggcaaac caacaattgc tgacaccgtt ccagctcttt ggaacagtaa
     7561 aaaggcaatc atcaccacaa aaccaaagaa tactaccgca acaacctact ttttccaaaa
     7621 aaatagtgca ggaaattggt atgaagttcg tcattttacc agtcatattg gcaaatgggg
     7681 atttgatcca aagttctctg aaaaaagttc tggaactcca gttggcgttt atcgtacagg
     7741 cattgcattt gggcaaaagg gtaatcctgg tacgaagctg acattcagag cgattactaa
     7801 tagaagttat tggatttcta actctaacga caaatcctat aacacttggc aagaacgcaa
     7861 ttcctctagt tctgcagatg aaaaaatgaa gattccgcag tacaaatacg gaatggaagt
     7921 gaaatacaac gctaaacgtg taaaaggtaa gggatcggct gtgttttacc atgttgattc
     7981 accaaaatac aattacacat taggttgcgt cgctcaaagt gaagccaata caaaagaagt
     8041 gctaaaattc gcggataaaa atacacttat tgtgttaggt gaagaaagcc gaataaaaac
     8101 tttttacggt ataaattaag ctagagaatt tctctagctt ttttgtttgg caaaaaagct
     8161 aagtagccta gccccaaatt ttcttctatt tgacgtataa taaaaagaaa cgaaaacgcg
     8221 gggtgaattg tttgacgagt aaaccataca taatgggcgt agacattgga acttcaagca
     8281 caaaggcagt actttttaat caacgaggag aagtgatttt ccggcaggcg acgcattatg
     8341 aactaataac ggatgaaact gggaaagcgg aagagagccc cacggaaatt ttcgaagcag
     8401 ttttatcatc tattcaagct gtgatgaaaa atgtgaataa agaagaatta gcggggattt
     8461 cgtttagttc tgcgatgcat agtttaatta tggttggaag taatggagag cttttgactg
     8521 aatgtatcac ttgggcggac ggacgaagca gtgagacgct tgaaaaagta aaaagggata
     8581 attacttatt ccaactgtat gaggccacag gaacgccgat acaccctatg agcccctttg
     8641 ccaaaatttg ctggttgaag gaggaaaagc ctactttatt taaacgcaca gaaaaatttg
     8701 ttgatattaa atcctatatt ttataccgat tatttggtgt ttgggtgatg gatgaatcgt
     8761 tagcatcggg gactggacta tataacatta tggagcacga ctgggaattt gaagcaatgg
     8821 aaattgtcaa attgactcct gatctcttgc caaaagttgt accagaaaca tatcaattaa
     8881 ctggtgtgaa aaaagaatac gctgaattaa tgggaatccc agaaaattta ccattcattg
     8941 taggggggag tgacggggcg ctagctaata ttggtattca agcgaccggc caaaatgatg
     9001 ttacgattac agtaggcaca agtggtgcag ttcgcaaact taccaatcaa ttccaaatag
     9061 attctcgtgg tcggacgttt tgttatggag ctggtgatgg atactttatc gcaggcggcg
     9121 cagtgaataa tggtggaaaa gtagtcgagt ggggtttgca acaatttggc tctgaagctg
     9181 aaattagtag gcgtgatttc gcaagcttta ttgcaaaaat agaggaagtt cctccgggcg
     9241 ctgcgggtct tttattccag ccatatttgt taggcgagcg tgcaccattt tggactaatg
     9301 atattcgagg aggttttgtt gggctgacga ttaatcatac aaaagcccat tttattcgtg
     9361 cgattttgga aggtgttgct tttaatcttg cagaagttta tgaggcggtt tcggctccag
     9421 atgacattat ttacgtcaca ggtgggattt ctgcgcatga tggttggtgt agacttctag
     9481 cggatatttt gaaccgtgag atacgtgttc cgcatacgat agaaggctcg agtttaggag
     9541 cagcaattat tggtatgcgc tcactcggaa ttttgaaaga tttgaatcta aaacatacgc
     9601 tgcctattaa agcggtatat catccaagtg agaacgtcct taaatacgcg gaattacgtc
     9661 tgatttttaa acaagtaacc acacagttaa tgtcgagcta cagccaatta aatagttggc
     9721 aaaagaagtt tgatattaac agctaaattt tggatttcat gatataatca ctaaaagaaa
     9781 agtgataacg agggggagaa accatgaata aaaaaatagt atggatagct ttaacattag
     9841 taggtatttg tgtagttggt acgattatcg cagcaatcat gagtgtttac ttacgttaaa
     9901 aaatatttcc gtgttcccgc ttgcactttt tacacgaaaa aggtacacta gtaattgagc
     9961 tcttttcaga gtttgcgcta aataattttt atttggcatt taattattgg tagcaaattt
    10021 gtcgtgctag acggggaggt agcggcgccc tgtaacccgc aatccgctct agcggggttg
    10081 aattcctcat ttgaggcatc gtaattgttt ggtctgccct tgacaagtgg tgttgaaggt
    10141 tgggtcttgc gcaatgggaa cctgtgaacc atgtcaggtc cggaaggaag cagcattaag
    10201 cagtgcttct catgtgccgc gaggtcgcct ggcccgagct aactatcagg gtaacgcaga
    10261 tgattgcatg tcgatgtgag gtgcgcgaca ctaattttaa atatataaaa gactattttg
    10321 cttagcgcag agtagtcttt tttctacaaa tcagccctat cctcagaaaa ataatgtata
    10381 atgattcata aactggtaca atataaaata gtaaagcaat tcatgacaaa ggatgaaaat
    10441 aatgcaacaa ctaaaatcaa aaaagaaatg gctgcccgct ctaatcgtcg cagttttcgt
    10501 aggaattatc gtaatcttag caattatgtt tggctttttt cagcgccaag aagtgtttga
    10561 taagtatgaa gtagcttacg aaatagacgg caaattatat gaagtcttcc caattagtgc
    10621 gacagatatt ggcgtagata aaaaatccaa agataaaaat ctctatttcc gcgtgaatag
    10681 ttactacaat attgattact tattccgact agcttataaa caatatgaaa ttaatgaacc
    10741 atctaccaat aaatattacg caggtttgat tgactacagc gtggccgata atgcttatgt
    10801 tacacaaaaa gatgtgtata tcacaaacaa tgaatcctat gcaacatatg acttttttga
    10861 taagaatggt aagaaaatct atacttataa tcctgaagaa acatcaaatg atgattacat
    10921 tgtgcgtatc aagccgacaa ttctacaagg atacgaaaaa agtgatatcg gtagctatga
    10981 tgactatcta aatattacgg cactttttaa agataaatta ggcatggacg taaatgtccg
    11041 aattgatgag gataaagaaa tggttatctt ctctattaaa taaaaaagag catccccgcg
    11101 gatgctcttt tttattaatt atcatctgtt ttcttttcaa catcttgctt tttttgttca
    11161 ctcgcatttt ttggttcttt tatatcatca ggaaacacaa tcgaaaaatg ctcttttttc
    11221 acaactttac tatttttcga ctcttccggc atatctcgtt tgactgccat atttatcacc
    11281 tcgaattgtt ggtattactt agcttatgct cattataaca cagaaagaag aatggataaa
    11341 ttagtaaact gtgtaatgtt aacgcttact tacacagttt ttttctgtat gtgtgtaata
    11401 caagtttaaa ggcaagaaag acaaggcttt caagagatta aaggatgttt tttccaaatt
    11461 tagtacttgg cacggaaatt gcaatagatt aaggtgaatc taaatgtaag ccttatcatg
    11521 aagcggagag gagggctccc aaaatttcac gaggtcatgc aaagattcca tctggtttgt
    11581 tttagtaatg gggattacta ggacaaagta aacagatata gctgataaac ttaaagggag
    11641 tttatacata gaaattatat tttgtttaaa agatgagtgt taaataaaaa ggtttacggg
    11701 aggataaaat atgaatggat taacagcatt tttggaaaag tattttgtgc cagtagcagc
    11761 gaaaattggt tcacaaaaac atctagttgc attacgtgat gcttttattt caacaatgcc
    11821 aatcactatg gctgggtcaa ttgcagtact tttaaatgcg ttttttaggg attttccaac
    11881 tgactgggga tggacaggat ttgtggaagc aatgcaacca cttatcggga ttaatggata
    11941 tgtatacaat gggacattag caattgtttc aattattttt gccttttcac tagggtataa
    12001 tttatcaaaa gcatatgaag tggatcgatt agctgggggg ctagtttctc ttgctgcttt
    12061 tgttatgaac ttaactgtta ctgtaagctt agatgcagta aaagctgcga ttgcggcttc
    12121 taatgcaaat ttcgatgtag ctactttacc aaaagaattt gctggaattt acggattctt
    12181 tagcctaagc caagtaaatg gtaccggctt gtttaccgca atgattttcg gttttatatc
    12241 aactattatt tatgcgaaat taatgcgcag aaatattatt atcaaaatgc cagattctgt
    12301 tccaccggct gtaagtaaag ctttcgcggc gattattcct gcgttagttg cactttatgt
    12361 tgttggtatt attgactggg cattcttcaa aatcacaaat atggacgtta ttacttggat
    12421 ttccaaaaca attcaagagc cgttattatc actttcgcaa gggtacggag ctgttttact
    12481 agttactttc ttagtacaac tactatggtt cttcgggatt catggtccga acgtacttgc
    12541 tccggttcta gaatcacttt ggggtacagc acaactacaa aacattagtg cggcacaaga
    12601 aggcgctaaa ttaccattcg aatgggtacg tggttctttc gatgcgtatg tatggatggg
    12661 tggatcaggc ggtacgctag tactgattat cgcattacta atgttctcga aacgagcgga
    12721 tgcacgaaca gttgcgaaat tgtctcttgc accaggtata tttaatatta acgaaccaat
    12781 catgtttggt ttaccgatcg tattaaatac aatttactta ataccattcc ttatcgcgcc
    12841 aatggtaatg gtaacaatcg cttactttgc aacaacactt ggcattgtcg gcccagttaa
    12901 aattgcagta gtttgggtaa tgccgccact tctgaattcc ttcttagcaa ccgggggaga
    12961 ttggatggca ccagtaattt cactcataaa tatggtcgtc gcgttcttga tttgggtacc
    13021 atttgttatt accgcaaatc gcgttggtgt accagaagaa gagatgaaag cttagaaaat
    13081 aataagtttc tggctaggtg cagctaaatt gtgcctagcc agtatatcat gtaggaattc
    13141 ctgcaccatt tttattcatt gcaagaagcg aaagataacg ttaaactata gaaaaggagg
    13201 tttttttaaa tgattattct taattgtcca atgaagcgag attacattac tgaattactt
    13261 gaaacatatg ataaagacgg tgtaactttt aaaaaaatag acgaaaaagg tatgaaactt
    13321 acttttgaaa caaatattga agacgaagaa aaggcagcaa aaatcgccaa agaaacaata
    13381 aaagcaactg aaataggctc tgtactctat ttccaagtta gtgtgggttg aaaatgaaaa
    13441 ttgttaatgc actatttctt attagtatag gtcttattat tattatgttt agtccttctt
    13501 atggaaaaga tgggatggct agtgtacctc ttctagttac aggacttgcg gttgttttaa
    13561 tcggctgtgt tttcatcgtg ctaaaaatcc gtaaagataa gaaagaaaag aattagaagg
    13621 agtcgattaa aaagtgaatg tcacacagaa attatatata tcccaaaaag aatgctttga
    13681 tacactagtt agctcagcaa tctatgatgt aaaaaatgcc actggtaaga cgcttcaagt
    13741 acgaaagtta gaaggatata aatatcaacg tacgatgtct aatggcgcac ttgctacaac
    13801 aaaaattgtt aaagtgcaac ctaacgaact ttatcaattc gaaacgagca gccgtgtgaa
    13861 cactcatacg acgacgtata cgataaaatc cactagcgaa actacatgcg aagtgaccta
    13921 taacgaatta atcgaaacgg aaaaagcgtt aaataaaatg aataatatta ttgttggttt
    13981 tatgtttggc ttcttccgta aaaaacgtgt aaaaaacttg ctgaaatcga ttgagctttc
    14041 ggttattaat gagagtaagc agaagcagga gaaattggct gctaaaagtg aacagtaaga
    14101 gtttggaatc gggctttttc gggggtctgg ttcttttttt ggggtttgat ttttgatttt
    14161 tggtggtggt ggtttttgaa gctagcccgg ctcaggacgt tttgaaactt ctggtaagga
    14221 ttaaatcatc gctttgctca gatttatatt gaagaagtag atcaaaacaa acaacgtttt
    14281 gaaacttctt caacaatacg ttataataaa actactaaaa tggttttagg tgaaggagag
    14341 tggcagatgg cgtatcaggc tttgtatcgg atttttcggc cgcagtcgtt tcaggatgtt
    14401 gttggacagg aacatgtgac gaaaacgctt aaaaatgcca ttgtgcaaaa taaaacttcg
    14461 cacgcttatt tattttctgg gcctcggggg acggggaaga ctagtgcggc gaaaattttt
    14521 gcgaaggcga ttaactgtga acacggccat gacggggagc cttgcaatga atgtgagatt
    14581 tgtaaaggta cgacggacgg ttctatacca gatgttcttg aaatcgatgc tgccagtaat
    14641 aacggggttg aagaaattcg agatatccgg gaaaaagtaa aatatgcgcc aactgtggcg
    14701 aaatataaag tatatattat cgatgaagtg catatgttgt cgacgggagc gtttaatgcg
    14761 ctactaaaaa cgctggaaga accgccgaaa catgtcattt ttattttggc aacaacagaa
    14821 ccgcataagt taccgctaac gattatttcg cgggtacaac ggtttgattt taaacgaatc
    14881 acgacacaag atattattgg tcgtttgaaa tttattttgg aagaagaaaa aatcccttat
    14941 gatgaaaaag cgttgatgat tgttgcgcgt gcggctgaag gtggaatgcg tgatgcgctt
    15001 agtttgctcg atcaagttat atcttacggg tcagaagaag ttgcagtgga agacgcgcta
    15061 gaaataacag gttcggttgc tcaaaatctc cttacaaaac tagtaagtgc agcgtttgac
    15121 ggcgatgcag cagaagcgat ttcaacgctg acagcactgc tagcagaagg gaaagacccg
    15181 gttcgcttag tggaagattt actcgtattc tttagagatg tgctgctgta tcaaaaagcg
    15241 ccgaatctgg aagaaacact ggaacgagct ttgattgatg atgattttgt tgctttggca
    15301 aaacgagcag attcacttaa agtgtatgag ttcgtgaaaa ttttaaatac agctcagcaa
    15361 caaatgcgtt tctcgaatca tccgggtatt tatgtggaag tggcgcttgt tcagttaact
    15421 caggcgggta aatcagttgc aggtggcggg aatgtgccag cagatgcagc ttctggaagt
    15481 gatgtctctg acttaaaacg tcaaatggag caaatgcatc aagagataca aacgctgaaa
    15541 aaacaaattg ccagcggggc tggagcagcg ccagccgata aaccaaccca aaatcgcggt
    15601 ggttctaaaa aagcaatcaa caacggcaag caatttaaag cgcctattgg taaaatcaac
    15661 catgtgctag gtgaggctaa gaaagagaat ttacagttaa tccgtggttg ttggggcgag
    15721 ttattatcaa tgttgatggc atctcaagca gcacttttaa atgacgcaga acctgtggct
    15781 gcatctcagg acacttttgt gttaaaattt aagcatgaga ttcactgtca aatggcgatg
    15841 gataatccga actttgttga aaccatcaca tcgagtattg cccgactgac tcaagtaaat
    15901 tatactttta ttggtatccc agaagatcaa tgggctgacg taagagagaa tttcctgcat
    15961 agtcatggta gcgacggcga tgcggaggac ggcgcaaatc cagaagctaa aaaaccagcg
    16021 gaagatcctt ttgttgcaga agccgcaaaa ctcgttggtg aagatttgct tgaaattaaa
    16081 gattaaaaaa caatagaaga aagaggagat tattcatgcg tggaatggga aatatgcaag
    16141 gtatgatgaa acaaatgcaa aaaatgcaaa aggaaatggc gaaagctcaa gctgatttag
    16201 aagctcaaga gttcactgga actgctggtg gtggaatggt tacagtaaaa gctactggta
    16261 aacgcgtcat tacagatgtt gttataaatg aagaagtagt tgatccggaa gatatcgaaa
    16321 tgctacaaga tttagtactt gcagcaacaa atgatgtatt aaaacaaatt gaagatacaa
    16381 cttcacaaac aatgggtaaa ttcacacaag gattaaatat tcctggaatg taatattgtt
    16441 tggtttgaga ctcttggctt atttacaaga gtctcaacta tttttcaata gaatgttcca
    16501 cgtgaaacat ttgtattttg aaggtgagag gaagacgaat tatgcattat cctgagccga
    16561 taacgaaatt aatagatagt tttatgaaat taccaggaat tggaccaaaa tcggcagctc
    16621 gactagcttt ttatgtgtta gatatgaaag aagacgatgt gctagatttt gcaaaagccc
    16681 ttgttgatgc gaagcgaaac ctaagctttt gttccgtttg tggtcacatt acagataagg
    16741 atccatgtta tatttgcgct gatacgtcac gcgatcgaag tgttatctgt gtagtacaag
    16801 aatccaaaga tgtcattgca atggaaaaaa tgcgtgattt tcatggctta taccatgtac
    16861 ttcatggaac aatttcgcca atggatggaa ttggaccaga agatattaac attcctgatt
    16921 tgctgaaacg tttgcaagat gacacgattg aagaagttat tttagcaacc aaccctaatg
    16981 ttgaaggaga agccacggcg atgtatattt cgcgcttatt aaaaccttca ggcataaaag
    17041 taactagaat agcgcatggc cttccagttg gcggagactt ggaatatgcg gatgaagtga
    17101 cgctctcaaa agcaatggaa ggacgaagag aagtataatc agaggtgata aaatggaatc
    17161 cagaagcaat aagtttggtc ggaagaaaaa caagaagatt ggtaaactac acaaatccta
    17221 tgatgcttat ctgatggaat tgattgaagt cacgcaagaa aagtggcaca aacaaaaagt
    17281 tctaatgcgt aaaagttttg aatatgatcc taatttagaa tatgaggaaa agaaagcaga
    17341 agctcgctat ttttaccttt tcaaagaagc acgtacaaga caattaaaaa acaaataaaa
    17401 aaatctacta agccaaattg gtttagtaga tttttatttt aggctaaatt tctgatctta
    17461 catacatcac gtctggtgcg tggctcacac gttcaccagt atttaaacgc tcgacttggc
    17521 gcatatctgc ttctgataat tcaaaatcat aaatagctgc attttctcta attcttgaag
    17581 gtgtttctga ttttggaatg atagagatat tattttgtaa gtgccatcga aggacgattt
    17641 gagcaggtga tttcccgtgt ttttccgcta ggtcaataag gatttgctct tgtaaaaccc
    17701 caccacggcc aagtgggctc caagcttggt gaacgatatg tagctcttct aaatagcggt
    17761 gtaaaagatg attcggaaag tgcggatgcg tttcgagttg atctactact ggaagcacat
    17821 tggcacttgt acgcaggcgg tccagatgat gcgcttcaaa gttacttaca ccaattgcgc
    17881 gaacaagtcc ctcgtcatat aatttttcca cagcgcgcca agtgtcaaaa aaagtatctt
    17941 gttttggcca atggactaaa tataaatcaa ttttgtccaa ttgtagtttt ttctgcgatt
    18001 tttcaaaagc tcgaagcgtt tcatcgtaac cttgttctgt attccacatt tttgttgtga
    18061 cgaaaaattc atctcttttc aagccacttg acgcaaaaaa gtctccaagc tctttttcat
    18121 tatggtaaaa tgaagccgta tcaaacaagc gatacccgac atccaccgcg gtttccagcg
    18181 cagtacgcat acgcgcttca tccgttagct tgtagacccc aaaaccatgt ctaggcattt
    18241 caattccatt gttcagtctg tatgtatccg agaaagaaag tgtcatttca tttacctcct
    18301 actttagttt attaacttaa gcataccaga aaatggagaa tttctgtaga atgaaggata
    18361 gaaatgcgat ttttttataa attccaaaag gacgtgagtg aatgagacaa ccttttcaag
    18421 ttttagttat accgtttatt aaaacggaag caaattatca gtttggtgtt ttacatagaa
    18481 cggatgcaga tgtttggcag tttgtagctg gtggaggaga agatgaagag gctatttcag
    18541 agactgctaa acgtgaaagt atagaagagt tgaatttggg agtcaaggtt aaaatgtata
    18601 gcttggattc acatgcatcc atccctaatt ttcatttctc atttaacaaa ccatatgttg
    18661 ttccagaata ttgttttgcc attgatttaa cgagttgttc atatcaggtt acattatctt
    18721 tagagcatag cgagttgcgc tgggtttctt atgagtctgc ggttcagtta ttggagtggg
    18781 atagtaataa aacggcgctt tatgaactaa atgaacggtt gaaaaacaat gatatgaagg
    18841 caatataaaa aaaggctgaa tctcagcctt ttttcttaac tcgggattaa actgtttagc
    18901 acgtgcgcaa tgccgtcttc attattggat aatgtaacag agcttgctgc ggcttttaat
    18961 tcagggacgg cattttgcat agcgattcct gttcctgcat attcgaccat ggtaatatca
    19021 ttatgtccat ctccgaatgc gataacattt tcagcgtgaa tgcccatcgg tgttaaaacg
    19081 gtatcaagtg ctttggcttt atcaatgccc tgagctgtga attcaaagta aaaatcagct
    19141 gtgaagacac aattaagtgt atctttgaaa ggggccatca ttgcttgata attttcttgc
    19201 atataggccg ggtcgccagc tgtgagaatt ttatttagac gataatctaa aaatgcggct
    19261 aaatcatctt tttcacagag tttgaaattc ccaccgcgag attcgtactg aacaatattt
    19321 attacttcgc cgcggtaagg tacgtagcag tcgtatacat cattcgtgta catataatcc
    19381 tctttatcaa tcattacttt cacttcaaat tgtttcatgt gttctaaaac ggcttttcct
    19441 tcttcaacag taagtgcttg gttgaataat tcttcacttg tcgcgcaatc aactacttta
    19501 gcgccattgt atgaaacgag caaaccgtga tgcttttcca tttctaattg ttccgcatat
    19561 acgtgcattc ctgtggttgg tctaccagat gcgagaataa gtttaacacc attctgttgc
    19621 gcggtgatga gtgctttttt tgtttctggt gagatttttt tgtcgtcgtt caataaagtg
    19681 ccatcaatat ctaaaataat cgcttgggtt gtcatgtaag tttagctcct ttttttcttt
    19741 attgtatcac tagaaattaa gaaaaaatca gatgtggcgc atattgaaag ctttttttca
    19801 attcgaaagg aaaatggctg tgtttttgaa aaatcattcc aattcggtgt tcattttttg
    19861 gtaattagtc gttttgtatt gaatgttttt ttcgtaattt tgattaaaat aaatggaata
    19921 aagcgtatcg aaaatgctta gtaaagattg gcgcgttgag aacgaagaga ctttgttgta
    19981 atggttctca gcggatgcca tgtagatttt gtgtgtggca aattcgacta aaggattgtc
    20041 ttgcatagat gtaattaaaa taatatcgac attgttttcg gacaagattt tgacgactct
    20101 ttgaagcgtc cgactccgac cgccgtaaga aacgacgatg gcaatatggt tttcatcgct
    20161 gttggcggcc gataagcttt ggatataatc ttcttcagga acattgacta aaacaccgat
    20221 ttcctgcatt tggaatttga agttttgagc aaaaaataaa ttggcggaag ctgcataaac
    20281 atcaatggtt ttcgcttgaa ttaatttttc accaattttg acaagttctt ctggatcggc
    20341 gttgtttaat gtttcatcaa tggttccttt gtatatttgg tttaggttgg tcattatttg
    20401 gtagggtgta tcggattcca aaataggata atcgtaattt aaatcttttt cttcatttgt
    20461 ttcacggaga ctcgaggcaa tttcgatttt tagttcaccg attccgttca gccctagttt
    20521 gttaattaaa cggtagatag ttgcagcgga gacaaaggca gcggtagcta attcttttgg
    20581 tttgcactgt aatgtttttt tcgggttcgc taaaatataa ttcgcaagtt ctttttcact
    20641 attggttaaa ttggttagtt cgcgtatttt aattaaaata ttcatcgttt caaatcctaa
    20701 ctttttagaa tgggaaattg ttttaaataa ttataccatt aaataaaaaa gtccctctag
    20761 acaaagtgca tctaaaggga tttttttcag ttatttaatt tcaattgttt taagatttgc
    20821 tgcgatgact tctggttttt catccatttg aacttgagca gcagtagcgt aagcaccttc
    20881 taaaattggt gcattaaaga gaataatttc tttttcgctg atttcttcta ctgtttctat
    20941 attcattttg gcgcttccga ggtcgtagaa agtgtagact ttattagctt cgttactttc
    21001 aatcgcttca tttacggcat caaaacttgt gccaatgcga ccgtcttctg ttccaccggc
    21061 atgcgtgata gagacgtctg gggcaatttc tttaataata tcatggacgc cttttgccac
    21121 atctttggaa tgagaaatga taacaacgcc ataaggttta gccatgggtt agctcacctc
    21181 cgtttgaagc attgcgtgga ataggagggc ggaagagtag gcaccgggat caagatgccc
    21241 gatagaccgt tcacctaggt agctggcacg tcctttagtt gcttttaaat cttttgtttt
    21301 ttgtaaagct gcttcaacaa catcatctgt taaatcttcc tgatgaaggg catttacaac
    21361 tggttcccaa acatcaatca ttgttttctc gccagcatgg gatttaccgc gtttttcaat
    21421 cccttcaagt cctgcttcaa gcactttggt taagccttcc gcgtcaattg tttctgaatc
    21481 taccgcttta ctcatgttta aaaaggctgt tccataaagt ggtccagatg cgccgccgac
    21541 cttgctgacc atcgtcatcc cagcggtttt aaatacatct tttaaatcag cgggttcttt
    21601 ttctgtgaaa gcttttttga gttcgccgag tccgcgagcc atattgatac cgtggtctcc
    21661 atcaccaatc gcttggtcga gatcacttaa taattgtttg ttttcttgta cgcgttcgcc
    21721 gaagtcattt aaccagcgta acgcccaatc tttatcataa gtcatgattc attcctccaa
    21781 attttattac catgcaattg tgtccactgg gagtttcaac atatcaaccc atttttcgtc
    21841 ctctaatttc aaaatggtta aggataaacc agccatttca agagaagtca tataatctcc
    21901 aacgagtgtt ttttcaactt gaacgccggc attttttaga agttcatgga catcatttgc
    21961 gaaaacatat tgttccataa gtggtgttgc gcccatgccg ttcacgagca caaccacttt
    22021 atctccaggt aggaatttgc tttcattgct aatccgttcg tacagttgct tcgctaaact
    22081 tgcagatggc atgatttttt cacgcgtaaa gccaggttca ccgtggatac caatgccaag
    22141 ttcgatttcg tcgtcaccaa gctcaaagcc aggatgtcca acctcaggaa cagtacacgg
    22201 agtaagtgcg acaccaagcg ttttaaccga agcaattact ttttcaccaa gggctttcag
    22261 ttcatcaaga gatgcgcctg cttctgcggc tgccccgata attttatgca cgagaacagt
    22321 cccggctaca ccgcggcgtc ccgttgtaaa agtactatcc tcaacagcaa tatcatcatc
    22381 tactacaatt tgttctactt taatatcatc ggcatctgct aaatctgccg ccatttcaaa
    22441 attcattacg tcaccagtat aattttttac gattaaaagt acaccagcgc cttgatctgc
    22501 ggcttttata ccttcataaa tttggtcggg agttggggaa gtgaaaacat cgccacatac
    22561 agccgcagag agcattccgc gaccaacata accagcatga gccggctcgt gaccagaacc
    22621 tccaccgctt acaagtccga cttttcctgg acgtttatca tttcttgcaa tgacgcgagt
    22681 tccttcgaca cggtgaacaa catcagcatg cgatttcact aaaccttcca ccatctgttc
    22741 tactacttga tcagtaccgt taagaatctt cttcatctga caaaaaacct cctttaaaat
    22801 tgtcctctta cctcaatttc cctttactag aaagtcaaaa cgtagttgct gtctttatta
    22861 tacaacttat aaaatgaaaa cgctttaaaa ctgcaagaat gtgtcataaa cccagcaaaa
    22921 tggtacaatg aaggagagaa tttgaaaagg ggaattgtta tgaggaatca atctaaaatg
    22981 cctttagtgg aacggttaga tgctcatgct aagtcttgcc caatatcact ccatgtgcca
    23041 ggacacaaaa gcggagccat ttatccagat gcatggcaaa aatttttgaa atgggacgta
    23101 acagaaatta ctggaatgga tgatttgcat cacccagaag atgtgatttt ggaagcagag
    23161 gagttacttg cggaatgtta tggaagcaaa aaaagctact ttttagtcaa tgggacaagc
    23221 ggaggaagct tggcagttat tatggcgacg ttgaagcacg gggagaaagt tttagtgcca
    23281 agagatgcgc ataaatcaat cttgcatgga atcgaactgg caggcggaga accgattttc
    23341 ttaaccccag cgacaaacga agaagttggc gtcgcgagtg gcgtgacaac cgaacttctc
    23401 gaagaaacat tacataatca cccagatata aaactatgta ttttcactta tccgagctat
    23461 tatggaacga cttttaactt gcataaatgt attcaaattg cgcatgattt tggtgcggtt
    23521 gtgtttgttg atgaagcgca cggagcacat tttttaacaa gttctgaatt tccgaaaagt
    23581 gcagtggagc ttggtgcgga tgtggttgtt cagtcggcgc ataagacgtt gccggcgcta
    23641 acgatgggtt cctatttaca tgtggtgaat gatttaccga tttttgaaaa actaccttat
    23701 tacctgcaag tattccaaac gagcagccca tcttatttaa ttatggcgtc acttgatgcg
    23761 gcgaggaaat atgcggcaac ttacacagcg gcggacgtcg aagctttttg gaaaatgcgt
    23821 gccagatgga ttaaatggct gacgaagaat aaatttgacg ttattttgcc agatgatccg
    23881 cttaaaatca tcgtgcgcaa aacaggctac acgggctacg aactgcaagc aatttttgaa
    23941 gaaagctctt atttcccaga gcttgccgat gagtcacagg tattactgat tttaccatta
    24001 attaaaaaag ggattgattt cacgcctatt agccggattc attctccggt gaaaaaagaa
    24061 atcgcgaaag aaccatatga aatgtcagcg ccttttgcgt caggtcttgc gctaacttat
    24121 gaagaaatgc acgcacgcgc gaccgaattc gtattactag atgaagctac gacacgcgtt
    24181 tcggctgaaa caatctcgct ctatccgccg ggaattccag caatcatccg cggagaaagc
    24241 atcacagaaa agcatattcg cgaactaaaa aacattcgca cacgccacta ccaaggcggc
    24301 gaaaaactag ccgagaatta catccgtgta ttccgctaat ttatgctata atcaaacaga
    24361 aagcgacgcg aaagggaaag gaaattacta aatgaaagca atttttatta cactcgaagg
    24421 cccagatggc tctggtaaaa caacagtagg aacactactt aatcaaaaaa tgacggaagc
    24481 tggcattgat tttattaaaa cgcgcgaacc aggtggcagc ccgatttcag aaaaagtaag
    24541 aaatatcgtg ctcggaattg gcaatgaaga aatggaccca aaaacagaag tactacttat
    24601 tgcgggagcg cgccgtcaac atgtcgttga aacaatccgt ccagctctag cggcagggaa
    24661 aacagtactg tgtgaccgtt tcatggatag ctctcttgcg tatcaaggtg ccggacgtga
    24721 catgaatatg gaacaagttt tacaagtgaa tttatatgcg attgaggata cattgcctga
    24781 ccggacgtac tatctcgatg tgcctgccga agtcggttta gctagaatcg ccgctaataa
    24841 gggccgtgaa gtcaatcgct tggataaaga agatattacc taccacgaaa aagtccaagc
    24901 tggttacgaa aaagtcatca acatgttccc ggaacgtttt atgcgagtgg acgctacaaa
    24961 gacaccagaa gaaatcacag aaactatttt agccgacatt ttacgacaat tagcctaaca
    25021 tctagtggga cttcaacacc ttgccacaag tgcatatcgc tctttaaaat ggtgtttgtt
    25081 tgctataata gaaaaaaaga tagattttta ggaagggttg atttctttga aactgatatt
    25141 tgcaatcgtc caagaccaag atagcaaccg tttgtctgac gcacttacaa aaggcaattt
    25201 cggtgcgacc aagttagcta caactggtgg atttttaaaa gcaggcaaca ccacatttat
    25261 catcggtaca gaagatgaac gtgtagaaga tgccctagcg ataatcaagg aaaactgtaa
    25321 agcacgcgaa caaatgatga caccatccgc ttccttaggt gtgacggtag atacgtatgt
    25381 gccttaccca atcgaagtac aagttggcgg cgcaaccgta tttgtaatgc cggtggaaag
    25441 tttccatcat ttttaaaaca gagaaaaagc aggtatgcga taagggctac ctgctttttt
    25501 tatctataat gggaattaga tgctttaaac tatcaatgcg agataaatga attataacca
    25561 atagactctg ctattcagat tgtcattaga atctgtttaa tttaataaaa aaaccgcaga
    25621 caaagcaatt tctcgcttta tccgcagttt ctgacctatc tcgctcatga ggtaggcttt
    25681 ttacattcac ttaatcgtca atttctgtcc aacatgaatc atgttgcttg ttaacttgtt
    25741 ccaagcttta atattatcta cagttgtttt atattgtcta gaaatggccc ataaagagtc
    25801 gccttttttg acggtgtatg tttttactgt ggaattactt ggtttatttg tgcttggttt
    25861 tgcggtattt gtgtttgtag tagttccggc gctaacttta agtttttgtc ctgggtaaat
    25921 gaaatcggat tttaagttgt tccaggattt taggttagca atagttactt tgtggttgtt
    25981 agcgattctc caaagtgagt caccttttgc taccgtataa actttagcgt tcgtgttcgt
    26041 atttgtgctt ggtttggatg tattcgtgtt tgtgctcggt ttagaagtat ttgtgttaga
    26101 agtagaaccg gcacttactt taagtttttg ccctggataa atgaaatcgg atttcagatt
    26161 gttccaggat tttaggttag caatagttac tttatggttg ttagcgattc tccaaagcga
    26221 gtcacctttt acaactgtgt atactttagc gtttgtgcta gtgcctgtac ttggtttgga
    26281 tgtacttgtt cctgtgctcg gtttcgatgt attcgtatcc gatgtagtgg aaccagcact
    26341 tactttaagt ttttgccctg ggtaaatgaa atcagattta agattattcc aagcttttag
    26401 gttcgcgacg gttactttat ggttattagc gattctccaa agcgagtccc cttttacaac
    26461 tgtgtaaatt tttgcattgg aggtgtttcc ggtgttgcta gaatttccag tgttaccagt
    26521 acttccggag tttccgccag ttgttttgcc actgtcatat tgggttaaat tatatcggct
    26581 aatcaagtca tttaatttcg ttgcataggc tgtgtctgtt gcgtacgttc cagttaaggc
    26641 tttcgttgcg tctttgtagg aagtagtgtt gcttttccaa actttggagt agtaatttgg
    26701 gttccagctt gggccttttc gaatgacttg tgcgtaatct tctaaggatt ggtgataaga
    26761 cggatatttt ctaaatttag ctgtgattgt gtagtagttt cctttaccat catcttctag
    26821 tgtttgtttt gtataagatt ggccgttgta agctcctttg attccaaaaa ggttatagtt
    26881 tggagcagag cctaattcgc tcgttccata ggcgctttct aaaatggctt gggcgatcat
    26941 gacagatgcg tacaggtcat tttctgctgc aatttgggaa gaagaggctt ggattgtttg
    27001 gataaagctt tgaacagttg ctcccgaacg gagtgctgat ttttgtaata ggttgtatgt
    27061 agctggtgta gaagagcttg ttgcattgtc aggattgcta actgttgcgg gttcagctgg
    27121 agctttttct acttgcttcg ctgcagcttg attttcttct gctgtctttg tttgttcttt
    27181 tgtttcagtt tgcttagctt caacggttgg ttctgttgtg ttttcaggag tggccgttgc
    27241 tggtgtttct ttagttgtgt tagcttcagc gcttttagat gcttcgtcag caggcgctgt
    27301 ttcgtctgcg ctaacgatta cttcgatgcc gggaacagtg atagaggttg cgatggcagt
    27361 aaccccagca atcgttgcac cagttttgaa ttttttactt tttttgtttt tcttttcttc
    27421 ttgtaaggct tcaagaatac gttcttttct cgtcttttgc atggtaagtc acttccgatt
    27481 ctttaaatat tctacatcca ttattacata cttcacatta cttatgattg atatcgacaa
    27541 attgtaatta aattgtcaaa aaggctcgtc tttgttatac tgaatataag caagtgctta
    27601 cttagttgaa cgggggtaaa ataatgatta caaacgaatc catcatggat gcaacgcttt
    27661 gtatgatggc gaaacacggc atcaaaggct ccacaacaag acaattagca gaagccgctg
    27721 gaataaatga agctacgatt tttaaaaaat ttaagagtaa agacaatctt attcatatga
    27781 cgctggaagt ccaatttgaa agtatgaagg cggaaatcaa tcaatttttt gataaagatt
    27841 ttgagagtgc caaggtgttt ctacgtcaag cgagtcaatt tatttcggat atttatgaaa
    27901 aatatcggga ctttatggtg atttctgttc gagaaatggg cagcaaagat atggaattta
    27961 ttgatccatc gattgtggaa tatttgtatg aacgggttaa tcaaaaagta aaagaaatgg
    28021 ttccgagtaa gaactctgcg caagaagcag atgcgatttc tttgatttta aatagtgtta
    28081 ttttgcttat tatggtggaa aaagtacgcg atgatattta taagcgcccg ccaacgatta
    28141 caacaaccgc agattcatta gcagatgttt tgttaaaatt attgaaataa atcacgaaaa
    28201 gttaaataaa agttaagtat tttacatttt gtcttgcggg cttagatttt ctatgttaaa
    28261 ctcgtagacg attagagcga taataaatat gtagttttgc ctgttaggtg aggctcctat
    28321 gcaaacacag gccactgccc aaaaatgtcc aaagacgcca atgggtagaa cagggattgt
    28381 cggattaagg ctttccataa tgtggctaag agtattcttt acgttgcata gtgccaaaac
    28441 tttagcgagg ggagtctgtt ttagtatgcg tataaactca gaagtccttg ccaaggtttt
    28501 ggtaaggact tttttcatgt ttattatgaa aataattatc tgggaattaa aatctttttt
    28561 tcagataatt aagcttagat aaaattcgaa aggagatgaa ggcaatggac caccatcagg
    28621 gagaggaagt agaagaaccg gactcgtatt atagtaatca agctgcaaga gtgactaacc
    28681 ttcatctctg gcgcacataa acgttattct cagcttgcct agaaagaatt ggaggcaagg
    28741 aaaatgaaaa aactacatgt aaaaaagcaa ggtaacaatt tgctcaaaga gtcacaaata
    28801 ggcaaagaaa aagttttgga aaagttaggt gttatggaaa cggggctcac aaacgtagaa
    28861 gttacagaaa gattagcgga atttggtccc aatcaaactg tggaagaaaa gaaagtatca
    28921 aatttgcggc tctttattcg ggcgtttaat gatccgttta tctatatttt agcgatgtta
    28981 atggttgttt cgtatttgac ggacgacatg gaagcgactg tgattatggc actaatgata
    29041 cttgcgagcg ggatacttgg atttattcaa acaagtagag cagaacgggc gagttacgca
    29101 ttaaaaaata tggtgaaaaa tagagtcaat gttattcgaa atggctccat ggatttgata
    29161 atgcaagacg caatcgtacc tggagattta attgaaattt cggcgggaga tattatccca
    29221 gcagatgcgc gagttatttc ggctacggat ttattaatta atcaatcggc gctcactgga
    29281 gaatcgattc ctgctgaaaa atttgtggaa gacaaaagtg ccaatccaga aatttttgaa
    29341 cgggaaaacc tattatttat gggaacagat gtgttaagtg ggcatggtcg ggcagttgtt
    29401 ttgcggactg gaagctcgac gttctttggt tcgttgtcca tcgcagctac tgaacggcgc
    29461 ggcgatacta gttttgataa aggtgttaaa tcaatttcga aattactatt ttattttatg
    29521 atggtgatgg taccgattgt atttatgatt aatgggctta tgaagggcaa ttggttagaa
    29581 gcatttctat atgcagtagc gattgctgtt ggccttacac ccgagatgct acctatgatt
    29641 gtcagcacga acttggcaaa aggtgcaatc aatatgtcga agaaaaaagt aatcatgaaa
    29701 gaactgagcg ccattcaaaa tattggtgca atggacattt tgtgtacgga taaaactgga
    29761 acactcacag aagataaact agaacttata aaatacattg atagtgctgg cgaaacctca
    29821 gaacgcgtct taaaaatggc ttatttaaac agttacttcc aaactggttg gaaaaatgtt
    29881 ttagatcatg cagttattgc caaattggat gagagtactg cagcagcttg gaaaaaagtt
    29941 ggcgagattc cattcaattt tgatcgtcgc cgtttgagcg tagtggtcga aaataaggca
    30001 gaaacaagga tgattacaaa aggcgcggtg gaagaaatgc tcactgtatg cactcataag
    30061 gaatttggcg gtgctgtttc gacactatcc gaatcggaaa agagcgaact tcaagacatg
    30121 tgtgccgaaa tgaatcgctc aggaattcgt gtgattgctg tggcttataa aactggaaga
    30181 gtcggagaag catttactaa gaccgacgaa gaacaaatga ttattgcggg attccttggt
    30241 ttccgcgatc cagtaaaagc atcgacgaaa gaagcaatcg ctcatctttt taaaaatcaa
    30301 attaacgtaa aagttttgac gggtgataac gaaattgtta cgaaacgaat ttgtcaggaa
    30361 gttggcattc cagcgaacgg atttttacta ggtgcggata tagaagagct ttccgatgaa
    30421 gaacttacgc gcgaactgcg aaaatatcac atttttgcta aattaacccc aatgcaaaaa
    30481 tcgcgaatca ttggtttgct taaaaaagcg gggcatacgg ttggatttct tggtgacgga
    30541 attaatgatg ctccggctct taggaaagcg gatgttggca tttcggtaga tacagcggcc
    30601 gatattacaa aagatgccag ctcagtcatc ttacttgaga aaagcttaac ggttttaaat
    30661 gatgcggtga tggaaggtcg gaatgtattc ggtaatattc taaaatacct taaaatgacg
    30721 gccagctcta actttggtaa tgtgtttagt gttttggttg cgagtgcatt tattccattt
    30781 ttaccaatgc tatcgttaca ccttttactg caaaatttat tgtatgattt ctcccaatta
    30841 acacttcctt gggacaaaat ggatcgctca tttttgaaga agccgcatca atgggaacaa
    30901 aaaggaatgt tgcgctttat tctgtgcatt ggcccggtaa gttcgatctt tgatattgcg
    30961 acatttctaa ttatgtggtt tgtatttagt gcgaatacgg tggcggagca agcattattc
    31021 cacagtggct ggttcgtggt tggcttactt acgcaaacat tagtcgtaca catgattcgt
    31081 acagagaaaa taccgttcat tcaaagtcgg gcagctgcac ctgtcatgat tgcaacgctt
    31141 agtgtaatgg cgcttgggat tattattcca tttacaggat tcggtcacag cattgggttt
    31201 gtcagcttgc ctggtagtta tttcccttgg ttgatattga ttttggttgg ctacatggct
    31261 acgatgcaac tggtgaaaac tatttatatt cggaaattcc gggagtggat ttaaatgcgg
    31321 gcaggacgcg tgctgtttgt aacgtatata cttctggcga tatggagttt gctacttgtt
    31381 tatagtacga gttatggtgt tgctgttatg cgatacaaag tggagccgag ttatttcttt
    31441 cataggcaat tactttttta tgggcttggt tttttaggac tactcgtttg ctcgcgcatt
    31501 aatgtgcaac tattttacct gagacgaacg cttcggattt tggctggaag tttgcttggg
    31561 ttactgctgt tagtgcttct aacaggaagt gcggcgaaca atgcgcaaag atggctgtct
    31621 attgcgggtg tgacgttcca acctactgag atggttaaat tgctgctgat actagtaatc
    31681 gcaacagttt ttttgaaaaa aggttgtggt gttcgcgtgc aatattggtt gcttggattt
    31741 ttgtttttaa cagtggggct tgtcttcttg cagccggatc ttggaactgc actgatttta
    31801 ggtgttattg gggtcgcttt gtttttaaca agcggagtcg gcctcacacg ccttgtgcga
    31861 gtggctattt ggtctttcgg tctcttatta cttgtagcaa tgctgcttta tttctttcac
    31921 ccagactttt ttagttcagc caaattgggt agatttgctt ttctggatcc gtttaaccta
    31981 gataatttag atgcctctta tcaactcaga aatggctatt acgcgattgg gagcggtggg
    32041 atatttggaa atggcttggg aggcagtatc cagaagttag gttatttgcc ggagccgcat
    32101 acggatttta ttatgacggt aattgcagag gaacttggtg tttttggtgt tatttggacg
    32161 atatttttgt tgatgatgct aagttttaca gcgctctata ttgctattag tagtcatttt
    32221 atttttgatt cgatggtttg tataggtgtt tcttcttggg tgtcggtgca gacgtttttg
    32281 aatcttggtg gagtgagtgg aattattccg cttactggtg tgccactgcc atttattagc
    32341 tatggtggca gttcggttgt catgctttcg tgtgcagtag gatttgtact ggcggcggcg
    32401 agacggaacg tactagctaa aacgagagag gtcgtgtatt tatgaaacga gatgtacttt
    32461 ataaccggat tattttatcg gtgttcttat tgtctttagt tagttgtgtg gcaatctatt
    32521 atgcgcagca gacaaatcag tacaatacga attttttagg aatgcaattg gtgtttttag
    32581 caattgggac gcttacgtgt tttggtgttt ctaggcttcc ggtggagttt ttgcgacatc
    32641 atgcgatttg gttgtatgtg attatggtca ttacgctcct aggtatactc attcctaatc
    32701 ctttagtaca aaatataaat ggagcgacac gttggtatcg ttttgcaggg ctatcttttc
    32761 aaccttctga agtagtaaaa tccatattta tctttgtatt ggcgcatttt gcagtgaaat
    32821 atcaagcaca aaaatggaaa caattaggga ttctgacggt gcttacgggg atagtattac
    32881 tattaattat gaaacaacca gaccttggta cgacgattgt ttacggggtt acggcgctag
    32941 cgattatttt actggcaatt aaatcaacca aactgatggt cggaattatt acgttaatct
    33001 taacagctgc aacagttggt atgtatgttg tcgtgtatca cattagctta ttagagaaaa
    33061 ttgggtttca cgcgtaccag ttttcacgga ttcagacgtg gcttgatcca acaactgacc
    33121 cagacgccgt gtaccaactt aacttgtcga taaaggcggt tggttcgggg atgatgactg
    33181 gtagttcggg gacaaatgcg tatatccctg aaagccatac tgatatgatt tttagtacga
    33241 ttggtcatca gtttgggttt gttggtgtaa gtttgttgtt aattttattt atgctactta
    33301 tccatcaatt aattatggca gcgctattga tgaagaatac cttttcttcg cttgttttag
    33361 cgggctttgc agtgagtttt gcctttaata tttttgaaaa tattggcatg actgttgggc
    33421 ttatgccgct gacagggatt ccgcttcctt tcattagtta tggtgggagt gctgtgctag
    33481 gtaattttat tgcagtgggt gtagtgctag cgattatccg gtcagatgcc gatttaatag
    33541 aagaaaaaaa ccagctgtca tgacgacaac tggttttttt agtgttattt attcttataa
    33601 aggtctacaa tttctttcgc taaatctttg aaagtgattg cattcattaa gtggtcttgt
    33661 gcgtgaacga gtagaaggga aacttctgtt ttttcgccac gtgcttcacc ttgtataagt
    33721 tttgtttgag aatgatgcgc ttcaagtagt gcttgttctg cttgggcgat ttgttcgtct
    33781 gcttgagcga aatccccttt tttagcggaa tcaatggcta acatagcatc gcttttagcg
    33841 ttaccaccga acacgatcaa gctcataata gtttgctcta aatccatctg taaacacgtc
    33901 cttaaagttt tggtttttaa aaattattca gcagtaacgc cttcagcagc aagtgcttct
    33961 ttttcacgac gtagctcttg aatttgagca attttcgcga atggaaggaa gattaggata
    34021 gatagaccta agtttacagc tgcaagtacg ccacctgcga tactttgtgt tgcaagtgct
    34081 ccaccgataa ttggtggtgt agtccaagga gttacgatag tacaagctgg tacccaacca
    34141 atagctgttg caaagtaagc tacagttaca agtacaagtg gtgccaagat gtacggaatg
    34201 aacataattg gattcaagac gattggaaga ccaaacatca ttggttcgtt aatgttgaaa
    34261 atacctggcg ctgcagacaa tttagaaact gtcatgtacg ctttatgttt acgagctacg
    34321 ataaagatag caatgattaa accgatagtt gccccagttc cgcctaagtt aacgaaagag
    34381 tcaaagaaag gtttgttaac gatgtaagga agttctttac cagcttctag tgcttttacg
    34441 ttagcttcga tagctgggat gttgattgtt tgcatgaacg ggtcgataat gttcgcaccg
    34501 tgtaaaccaa agaaccaaag gaaagcagaa acaaatgcca ataataaagc tgctggcaag
    34561 gagtttgcaa gacccatgaa cggttcttgt actaattcgt agaaagaaat tactaagtta
    34621 gtcacaccag ctgcttggaa gaacgcagtg ataagaccaa agatagaaac agtgatcatt
    34681 gcagggaata aagctgcgaa tgaacgagaa actgccggtg gaacaccatc aggcatgttg
    34741 ataattaatt tcgggctacc acttaaacga gtgaagattt cagtggaaag aattgcaata
    34801 attaatgcta agaaaagacc agttgatcca agaccaccag tgtttgcaac gccgtctgca
    34861 cctggagcaa ttgcgccaat tgtgaagaaa gttgctacag aaactactgc ggaagaaagt
    34921 ggatctttgt cataagattt agctaagttg taagctacag tgaaagcgat aagtagtgct
    34981 aagatagcaa aagtaccgtt ccaaacgttt ccgccgaatg cttgccaagt tccttcacca
    35041 aataagttat tcatgaactt ttggtaagct ggaattggga agttgttaat taaaacggcg
    35101 aaagacccta gaatcataag tggcatagtt gtaatgaaac catcacgaat tgctactaaa
    35161 tgacgttgtc caccaatttt ggcagcgtag ggaatgaaat atttctccat aaatgcgata
    35221 aaaccattca ttttttattc tcctttttga gggataaagt aacagccggg ttaagacgaa
    35281 tacataattt ctaaaacatg gcgttattac tatacctctt tagtttttta taattttcag
    35341 ctagctagct gtaattaccc tctttttact tcattaactc taatgcttgt tctaaaactt
    35401 tgtcgccttt catcattccg taatcaacac tgttaataac agctaatgga ataccttttg
    35461 gctctaattt tttcttcatg tttccttcta agaaacgtac ttgtggtcca agtaataaaa
    35521 catcgatttc gtctaaatgg ttagctgctt ctgcttctgc aacggcgaag atttttgctt
    35581 caaggccttt ttctgcagct gctttttcca tttttgtaac tagtaagctg gtagacatac
    35641 ctgctgaaca tactaacatg attgttttca tgattatttc ctcctctaga taattctctt
    35701 aacacttatt atatatgcaa gtaccgtgcc aactttaaat gtggctataa aagggttttc
    35761 attttgtttt ttgcttacac attggctttt tttgtgtgta aattttacac acatagagat
    35821 attaacggaa tctttatgcg gagctttaga atcttaacac tgtctttatg cgtttgttgg
    35881 taggattagt ggtggaaaga gtacggtgaa ggggtgaacg gaaaatgggt gttgttctag
    35941 taattgctgg aataatcggt ttaggtttgt tggtatattt attttatgtg ttatttagag
    36001 gtgaggactt atgaagtata tcgtgatgca agatgcgttt tttgttgtat tgttattagt
    36061 tttggcggtg cctcttggaa tttatatgta taaggtgatg attggggaaa aggtattttt
    36121 gtcacgagtg cttgagccgg ttgagcggtt tggttatcga ttgatgggtg tgagtgaggt
    36181 tggcatgtcg gcgaagcgtt atgcagtatc cgtacttgct tttagtgcag ttggctttgt
    36241 atttgtaatg gcggtgttga tgctacaagg ctttttaccg ctcaacccgg aaggtatgaa
    36301 aggacttagt tttagtcttg catttaatac ggcggcgagt tttgtgtcga atacgaactg
    36361 gcaagcttat tctggtgagg cggcgttatc ttatttttcg cagtcgattg gtttaacggt
    36421 gcagaacttt gtttcggcag cgacagggat tgcagtatta tttgcggtaa ttcgtggctt
    36481 tatatggaag aaacagaaaa cgataggaaa tttttggcaa gatttatttc gagtgacgct
    36541 atatattcta ttaccacttt cgcttatttt ggcgcttctt ttagtgtcgc aaggagtggt
    36601 gcagtcattt gctgattatt cggttgtaga gacgcttgaa aatggagcaa aacaattgat
    36661 tccgcttggt ccagctgcaa gtcaaattgc gattaaacaa ctgggaacga atggtggagg
    36721 ctttttcggg gcaaattcgg cgtttccgtt tgaaaaccca tctagtttta ctaatttaat
    36781 agaaatgttg gcgattttac ttatcccagt ggcgcttgtt gtgatgtttg ggcgtgcggt
    36841 gaaggatagt aagcaaggac gcgcgattat gacagcgatg atgattgttt ttgttattgg
    36901 tgttgttgcg ataactatct ccgaacaatt tgcaggtcca cattatcaag gtgttgcgac
    36961 ttctggcagt atggaaggaa aagaggttcg ttttggtgtt ggcggttcgt cgctttttgc
    37021 agcttccacg acggcagcct cgaatggagc ggtgaacgca atgcacgaca gtttgactcc
    37081 gcttggggga ctggtgccga tgttctttat gcaactcggt gaggttgttt ttggcggtgt
    37141 tggtagcggg ctttatggca tgattggttt tattattttg acggtgttta ttgcggggct
    37201 tttggttggg cggacgccgg aatatttagg gaagaaaatt gaaccttatg atatgaaaat
    37261 ggtttgtttg cttattttgg ttccgccgct gttgactttg tttggaactg cggttgcggt
    37321 gatgatgcca agtgtgcaag cttctgtttc ggcgagtggg gcgcacggtt tttccgaggt
    37381 cctctatgca tttacttcga tgggaaataa taatggtagt gcttttgctg gatttgcggc
    37441 ggacacgacg tttacaaata tggttggcgc agtaatgatg ttacttgctc gttttattcc
    37501 acttgttgcg gcgctttatt tagcgcaaaa tatggctgga aagagttcgg ttgcagcgag
    37561 cagcgggacg ttatcgacga aaaatggcat gtttattggt cttttaattg gtgttgtggt
    37621 acttgttggc gcacttagtt tcttgccagc acttgcgctt ggaccgattg cggacttctt
    37681 tacaactttc aaatgaggtg aatggaaatg atggaaaaag gtatttggaa agatgcgctg
    37741 attcagtcga cgaaaaaact gtctccaaaa ctgcaagtga aaaatccggt gatgttgctt
    37801 gtttatgttg gtgcgatttt ggcaacgagc ctttattttc tcggtttctt cgggatttca
    37861 gatgagaagt ctggttatac gctagcaatt gcgctgattt tatggtttac agtgttattt
    37921 gcgaattttg cagaggcgat tgcggaaggt cgcggtcgag cacaggcgga tagtttgaaa
    37981 atggctcgaa aagacgtttt agctcgaaaa ttgaagaata ttgatgataa aactgatgtg
    38041 atcgaaattg cttcgaatga cttgaaaaaa ggcgacattg tgtatgtcct tgcgaatgaa
    38101 caaattccga tggatggcga ggttattgaa ggtgcggctt cagttgatga aagtgcgata
    38161 actggggagt ctgcacccgt aattcgagag tctggcgggg atagaagtgc tgtgacgggt
    38221 ggaactacgc ttgtttctga ctggcttgtt gttcgtgtga cggcggtctc tggagaaagt
    38281 ttcttagata aaatgattgc aatggtggaa ggagcttcac ggaaaaagac gccgaatgag
    38341 attgcgctac aaattttgct tgtaacgctt tcgattattt ttttggcagt ttcagcgacg
    38401 cttttaccat ttactgaatt tgcgagtaag caggcgggtg ctggatcggc aatttcgatt
    38461 acgaatgtga ttgctttgct tgtttgtttg gcgccaacta cgattggtgc actactttcg
    38521 tcgattggaa ttgcagggat gagtcggtta aatcaagcga atgttttagc gatgagtggt
    38581 cgtgcgattg aggcagctgg tgatgtggat gtgcttttgc tcgataaaac tgggacgatt
    38641 acactgggaa accgcaaagc aagcgaattt ttgccagtgg atggtgtgac ggaacaagag
    38701 ctggcagatg cggcgcaact ttcctcgatt gcggacgaaa cagcggaagg caggagtatt
    38761 gttgtattag cgaaagaacg gttcgacatt cgcggccgag attttgctga aatgcacgca
    38821 gaatttgttc ccttcactgc aacaacccga atgagcggaa ttgactatca agaaaatacg
    38881 attcgaaaag gtgcggcgga tgcggttcgt gcttacgtaa cggcgaatgg cgggacgtac
    38941 ccaaaagagt gtgatgcaat tgtgagcaaa gttgctggtg ctggtggtac accgcttgta
    39001 gtagtccgaa ataacaaagt gctaggcgtt atttatttaa aagacatcgt gaaaaatgga
    39061 gtgaaagaac gtttccttga tttacgaaaa atgggtatta aaaccattat gattaccggt
    39121 gataacccaa tgactgcggc agccattgcg gcggaagcag gggtcgatga ttttctagca
    39181 gaagcaactc cagaagcaaa attggaatta attcgtgaat atcaacggga aggtcatttg
    39241 gttgcaatga caggtgatgg cacgaatgac gcaccagctc ttgcacaagc ggatgttgct
    39301 gttgcgatga atacaggaac acaagcggca aaagaagctg ggaatatggt tgatctggat
    39361 tctagtccta ctaaattaat tgatattgtg cggattggca aacaactttt aatgacgcgt
    39421 ggtgcactga caacatttag tgttgctaat gatttagcga aatactttgc gattattcca
    39481 gtgctgtttt acggtatttt cccacaactt gaagcactta atttaatggg attaaccagc
    39541 ccgacgagcg ctattttatc cgcgattatt tacaatgcgg tgattatcat tattttaatt
    39601 ccgctttctt taaaaggcgt gaagtatcgt gaaatgccgg ccgggaaatt actgagcaga
    39661 aatatgttga tttatggtct gggcggtttg attgctccat ttatcgcgat taaattgatt
    39721 gatatgctgt taactgtttt aggaatcgtt taagaggggg agaaaacatg aaaagattta
    39781 tgcaaatttg gaagccggca gtagttggat ttctactttt gacattgatg tgtggtgtgg
    39841 tttatccagg tattgtcact atttttgcaa gtgcagcttt ccacgacaaa gcaaatggca
    39901 gtataataga agaaaaacga gcagatggta cgaccggaaa agttggttct gctgaaattg
    39961 gccaaacgtt tactaagcct gagtacttga ttggacgggc agcaagtgac ggggtggcga
    40021 caaacttaaa ccctactagc gaagaacaaa aacaattagt agaaaaacga attgcttggt
    40081 ggcataaact agatccgacg aacaatcgag ttattccaat ggatctcgta acagcatcag
    40141 caagtggcgt ggatccggat atttcagagg ctgctgcggc atatcaagta gaccgaattt
    40201 ctagagaacg aggcatttcc accaaacaag tcaaagaaat tatcgcagaa catacaagtg
    40261 accgattgtt aggcttttgg ggtgagccaa ctgtgaacgt cttacaagtg aatttggcat
    40321 tagatagatt gaaaatgtaa gttggaggcg agtatatgga aacgaatcgt ccaagtccgg
    40381 atgcgctact ggtgaatttg caagaagaaa cagattcatc cgtgggtaaa ttaaaaatat
    40441 attttggctt tgcggcaggt gttgggaaaa catatgccat gttaagtgac gccaaagatc
    40501 aattagcagc aggtgtggat gtcgtggcgg gttatattga acctcatgct cgcgaggaaa
    40561 cgctgagaat gttagaagga atcccgatta ttccaccaaa agcaattact cacaaaaata
    40621 ttgcgctcaa agaattcgat ttggacgaag cgttgaaacg gaagccggaa cttattttgg
    40681 tagacgaact cgcacatacg aacgcatcag gtgtacgcaa taagaaacgt ttccaagatg
    40741 tggaagaatt gcttcaagcg ggaattgatg tgtatacgac tgtcaatgtg caacatattg
    40801 aaagtttaaa cgatattgta gaaggcatca ccaaagtagc tgttcgcgaa acgattcctg
    40861 actatgtttt tgatgaggcg gaccgagtta aattaattga tattgaaccc gatgaacttc
    40921 taaaacggtt agaacagggt aaaatttatc aaccggcgcg cgcaaaaaca gctatgcaga
    40981 acttcttcac tagagaaaac ttaaaactct tgcgtgaaat tgcgatgcga aaagcggccg
    41041 accgaattag tcacgaatac gatcaaacag gtgtttatcc agagaaacgg gcgagtagta
    41101 aatggttagt ctgtattgga acgtcgcctt catctgcaaa actcattcgc tggacagcgc
    41161 gcactgccga ggctttccgc gcaccatgga cggcccttta tattgaaaat gaagaaaatg
    41221 attatatgac caaagcagag aaaaaatgtt tacgggaaac gatggaactc gctgaacggc
    41281 ttggcgctga aattgtcacc ctcgccggac atgacattgc agaaacagta gctgagtatg
    41341 cccggttgac tggtgtgaca aatatcgttg tcgggaaatc gcgtcgccgc atgggtttaa
    41401 ggtctttatt tgaagatgat tttgaggatc gtctcattac gcaccttgat aacgttgata
    41461 tgcatattat cccctcgagc caaccaaaaa cgaaaaagcg tcgaatgaaa atgcgtttta
    41521 aaagtttttt aacctggcat gacatggcga aaatgatttt acttctaaca ttggcaacgg
    41581 cgatttgtgt cggtttaagt gaatttggca tcggtgatca aaatgttatt atggtatata
    41641 ttttatccgt gttaattatt tctcgtgtaa caagcggcta tgtttatggc gttatgggtt
    41701 ctatcattgg tgttatgtta tttaatttct ttttcacgac accactttat acgtttaata
    41761 caattcaagc gggctatccg gtgacgttcg gaattatgct tttagtcgct cttattacga
    41821 gtgcgctaac tgtccgaatt aaaacccaag ctagcctggc cgttgagcga gaacgtcgaa
    41881 ccgaagtgct ttatgaaatc aataaacggc tattagtcac ccgtaattta aaaggaatta
    41941 tcgatttaac caacgaatat attttgcatt tatttagccg ttccgttatt ttttattctg
    42001 cggatcctgc caaaagtaat aaagggattt tcgtgcaagc agaaggaaaa gaagatgcga
    42061 gtgcgcttct tagtgcggat gaagaagcgg ttgcccactg ggtatttaaa aataaaaagc
    42121 gggcgggtgc tgggacggat acgttaatgg gggcatttgg ttattatatg ccagtgatgt
    42181 cacaggggaa agtgcttggt gttattggtg tttcttgctc cccagaagat ggtccactta
    42241 cacaagataa tcggatcttt ttacgaatga ttagctctca agtggcacta gctttagaac
    42301 ggcaatattt atctgaagaa caacgccaaa tcgtcatcga atcagcaaaa gaaaaaatga
    42361 gaagcaattt acttcgggca atttcgcatg atttaagaac accgctcact ggcattgttg
    42421 gagcaagttc tgccttactt gaaaaagaaa ctgagctaga taaagaaacg gaacataatt
    42481 taattaaagg tattaaagat gactctggct ggctcattcg gatggttgag aatttgcttt
    42541 ctgtgacgag aattagtgaa gggttagtga gtttggaacg agctccagaa gccgtagaag
    42601 aaattgtagg tgaggctgtc ggtcgaatca aaaaacgttt cgcggaccga acaatccatg
    42661 tcaaagtacc gcgcgacctt cttatggttc cgatggatgg cacgttaatt gagcaagtcc
    42721 ttattaattt aatggaaaat gcgctacgtc atggtggaac tggtgcagaa gtttgggtag
    42781 acgtgacgaa aacgaagcaa agtgcgattt ttagtgttcg tgataatgga aaagggattc
    42841 cggaaaaacg cttgccagat ttatttgata cttttgctgt ggaagcgaga gagcgttctg
    42901 atatgtcacg cggattagga cttggtttat cgatttgtat gtcgattatt cgagcgcatg
    42961 acgggacttt agaagcgaaa aataacaaac atggcggggc gacattctgg ttcactttgc
    43021 cactagacgg aggagatgga aaatgaacag caaacgactt gtgctaattg tggaagatga
    43081 agagggtatc agtaatttta tttcagctgt tttgactgcg agtgattact cggtgattaa
    43141 agcagtgaat ggaaaagaag cgctagagca gacagcaagc cattcgccag atgttgtgct
    43201 actcgaccta ggtttgcccg atgtagaagg actagacgtg ctccgtgata ttcgtgtttg
    43261 gtcaaaagtg ccgattattg ttgtatccgc gcgcgatcac gaacgagaga aagtgacggc
    43321 acttgacctt ggtgcagatg attatattac gaaaccattc ggcacatcgg aactactggc
    43381 gcggattcga actgccctaa gacacattca accaagcagc aaagaagcgc caaatgatca
    43441 tattattcgc attcaagacc tgtatattga tgacgaccgc cgacttgtca aaatgggcga
    43501 taaggaaatt cattttacgc caattgaata taaaattttg cttctattag ctcgccacgc
    43561 cggaaaagtc cttacgcatg attttattat tcgcgaaatt tggggacctt atccaagtga
    43621 aaaccaagca cttcgggtca atatgagtaa tatccgacgt aaaattgaac aaaatccggc
    43681 agaacctgca tacattttga cagaagttgg ggttggatac cggatggcag aagaataata
    43741 atatgttatg ataaaaataa acgccaggag gaattaatat gcataaaaca atccgtagcg
    43801 tagacgttta ttatgaaaaa tatggtgaag gaataccgat aataatgatt catggttttg
    43861 gtcctgattc gcagctgatg attggttgca tggagccggt ctttgataag gaaagtccat
    43921 tttcacgcat ttatgtggat ttgcctggaa tgggaaaaac cgagaattac gattcaatcc
    43981 aaaatgctga ccatgtactc acccttttac tagaatttat tgaagcggta attccgggag
    44041 agcaattcgt actcgccgga gaatcgtatg gtggttattt agcccgcgga atcgcagcga
    44101 aaatgccaga tagagtactt ggagtcttac ttatttgccc agtcatctat cctgaaaaag
    44161 aaagaagaac gctacccgaa caaaaagtca tgtaccaaga tgatacgttt gtacggtcgc
    44221 tatcaaaaga agaccgagcg tacttttcaa aaagtggcgt tattttaaca gcaagaaact
    44281 ggaatcgttt cttggcggaa gtgatggcgg gaatgattaa tgcagatgga gaatttttag
    44341 accgattatc tgcgaactat gcgctgagct ttgatccaga cgaaaaagcg caattcgatg
    44401 tgccggcatt attcttattt gggcgtcaag atgatcatgt gggatacgca gacgggctta
    44461 cattgcttga aaaatatcca catgcgtcga ttgctatcct tgattttgca ggacataatt
    44521 tacaaatcga acaaccaaaa atatttacaa caatggtaga ggatttcttg ttccgcgtga
    44581 aaccagaata agttaacctt tgtgaccacc aaccatttca gaacgtttta agccagtcgc
    44641 tccatttaat aaactgcttg cgtgcatgag ggatttaaac ccataacgcg aacggatttt
    44701 gtcgaccgtt atttctaatt gctcatgatt taaagttcga gtagcatcct caaataaatt
    44761 gagctgcaac cctgttttca aagtaatctt accgcatgaa atagcaatgg agcgcacagg
    44821 ttcgcgttca tcgtaacgtc taaatagttg caggaaataa ggaataagcg catgactact
    44881 actagtagga gggattttag cttgatggct gaatcctttt tttatgctgt atttactgta
    44941 gccgatactt agatgaataa cagcagtatc cacatgattt tggcgtaaac gcattgctac
    45001 ttcctcaacc atttcgcgga tgacaatctc tacttcggcc ggcacatgat agtctttttc
    45061 aagaatttgg ctttttccgt agcttttact aactggaaca tatttttcat ttaaaagact
    45121 ataatcgatg ccgtgagcat gataataaag ttgctctccg actacaccca ttgcgttttt
    45181 taacacttgt ggcggcgttt ggcttagttg atacatatta aagattccca ttttttgcag
    45241 gcgaacagca gtccgacgcc caattccgca cacatcatcc aaatgtctga ttttccaaat
    45301 ggtctcggga acgtcttcat agcgccattc agcaatgccg tcatcccggt ttttagccac
    45361 attatcgagc gcgagtttgg caagaagagg gttgtcgccg attccaactg taacgtatag
    45421 ccgcaattct tctaaaatat cacactggat tttgcgaaca atttcttccg tgctaccgaa
    45481 taacaaatgc gatccggtga tatctaaaaa acattcatca atactataaa catgaataaa
    45541 ctcagcggga acataacgtc taaaaatggc ttgaatcatc gcatttactt ttagataaag
    45601 tttcattcgt gggggtgcga taataattcg tttatcccag gtgggcagtt catacattct
    45661 tgagccggtt ttgatgtgat gttcttgttt catttttgga gtggcagcta aaacaagccc
    45721 gccagcccgg tcggcgttac tcattactac taaatatgct tcaagtggat tcagccgacg
    45781 tttgacacat tcaactgagg cgaaaaaacg atttaatatc gatgcacaaa atatcacggc
    45841 gcggtgcacg gctataatct tctatttgta ccatttttcg acactccttt cttctacgtt
    45901 tcgaattgca gagaaggaaa gcgggacagt cccctcagag tttttaatgt aaatggtgtt
    45961 gttctccacg cctgaaatac gaccaataat atcattttca ggagcagatt ctgggtttaa
    46021 tggctttttc tggataacaa gcgtagactg atgtgtcatc gcgctagcta gcacactttc
    46081 gataaattct gtagtcatag cttctttcca tactaaagtt ggttcagcgt cttgcattgc
    46141 ttctgtatgc tcgcttaata aaaaaccgcc ccatttcttc atgccgcgat cttggtagct
    46201 catatgatga cacctccaat atttttaaat aattagctgt tgcttaaata tattatacga
    46261 acaaacgttc ttatttacaa tgtgtaaata tcctcattta tgctagcaaa acgggaataa
    46321 attactattt gtgaactatt aataaagtgg acataaaaaa agaccaagcc tgtaaaatta
    46381 gacttggtcg ttattatttt tttaagcctg gctatcttcg taagcggtga tttgtcctac
    46441 acgatttgcg tgtcggccac cttcatacgc tgtttctagc caaattttga caatgtcttc
    46501 tgctagccct gggcctatga ctctcgctcc aagcgcaagg acatttgtat cattatgttc
    46561 gcgcgtggcg tgagcgctaa atgtatcgcc aacaagcgcg caacgaatgc cttttacttt
    46621 attagctgca atactcatac caatacccgt accacaaact aaaatgccgc ggtcaacttc
    46681 ttggttaaca actttttcac taacggtaat cgctagtccc ggataatcca ctgattctgg
    46741 tgcttcgggg ccaaattctt cataactaat tccaacactt tcaagataag aaataatact
    46801 ttttcgtaat tcaattccgc catggtctga agcaatggca actttactaa ctgtcatttt
    46861 ttctcctcct gccgtataat caataccttc attatacatg aattagagtt tttcgacagt
    46921 ctttctgttg cgccaaggtt ttgcgtgaac aataataacg tcgcaaggtg catgagcggc
    46981 cgtatattca gacacactac caagaataaa ttgctctgtt gctgaaagtc cagttgcgcc
    47041 aactaaaatt aaatcaggct cgaaattccg cgttattttt ttattgaagg tagtttttgg
    47101 cgtaccaaag tgaacaaaag tttctacatg cgagacacca gctttttcag cttctttttt
    47161 gtacatttca actaattctt ctccgtaagc tttggctttt ttggcatagg tttgttcata
    47221 atcgattaat ggtgcaatcc ggcgcacatc cgcgacaaag ccaataccaa gcgtagcgcc
    47281 atccattttg gcaaattgaa cagctcgtct tagcgcggct tccgcttcat ttgatccatc
    47341 tacaccaaca agaatccgtt tgtaagcaga cattttgtat caccctctca aaagttttcc
    47401 ccttatttac ttaataccca taaataaaag aaagaagcat gattaaagag aaaattttgt
    47461 ggtactatga ggaaaaggag ggctctttat ggcaaagcta gaaacgtttt atcccattgt
    47521 agctacacca aagcgtgcag gctataaaga atatctaccg agtgcggttc ttacaggcta
    47581 tattcgctgt ttttgggagg cggatgataa gaatttcccg ggaaataatt tagtggttcc
    47641 tgatttatgt gcggatatta tttttacaat tgatagtaaa acagggctag tgacggatgc
    47701 tatatttgtt ggcgttagtg atgcaccgtt tgagtctgac gatgaaagta ataccgagct
    47761 ttttgctgtg cgattttatg cgtggtcgtt atttttattt gtcgaacagg acttgactgg
    47821 tagcatgaat cgggtaaaag agccggaaga gatgtttgct ggatttgttt cgttttttca
    47881 agagaggttt gctgaaatga cgacgaacat ggaaagaata gctttattag aagaattttt
    47941 actgcgaaaa ttaatgatgc ttggcaagca agtccatcct gattttttaa acggtattga
    48001 taagttacta caaaatccca atcaacttgc gttaggagct gtatctgttc ggcagttaga
    48061 acggctattt caaaaacata tgggacttgc accaaaacag acagcaaaac ttattcgttt
    48121 ccaaaaagta ttacaggcat tatatgagaa tccaagtgtg ccgggcgctg agcttgctta
    48181 tcttcatggt tttacggacc aggctcactt aattaaacaa tttaaacgat atagtaatca
    48241 caccccagaa gaaatgaagc aaatttttct gcaaaatgtc gcaaatatac aatgaaaaac
    48301 gtaaatgctt tgttaaacta acgatatgga ggtgcttaaa atgattaatg aatttgtttg
    48361 tacaaatatt tccacgcaag atccggcggc gttggttgcg ttttatcacg aaaaattggg
    48421 aattccgata gtattcgaag ggtacgacaa ttatgacgga gcgaaattag gtttttctga
    48481 aaaggctccc gggattattg tttggaataa tagcaaatgg ggcgaagcaa gcgaatctaa
    48541 agtggagttt gttttctcgt gtgatactaa tttggatgag atgtaccggg aacttcaaac
    48601 agcgggagtg gagacaccag aacctcgtgt ggctgagtgg ggcggacgtg aactgaattt
    48661 acttgaccca gatggcaata agattatgat tttggagccc gcacaatgag cgatgaattt
    48721 gcttggatac agaaggaaat cagtggtctt aaaggagtcc agtattcgtt taaagaagaa
    48781 tggggagcgg agcgctatca cgttttggat cagctaatgg caatgcgcgg aacgaataaa
    48841 gaagggcagc cgattttaac cttgaagtgc gatgccgaaa aaagtgagca acttcgcgca
    48901 gaaaatcgag ccatcgttcc cggttattac atgaataaac gagtttggat ttctgtttta
    48961 ttggaagaag aacgagataa agacttgatt cgcgcattaa ttcagcatgc gtactcagaa
    49021 gcgaagaata agttgccaaa atataaacaa gcggaacttt ttgactaatt tagttaagaa
    49081 gttcttattt ctgttataat gaaattgatt gtgaaaaaga aaacaaaaag gagatgaaaa
    49141 gatggatatt aatatgttta tcctatactt cttcatttat tctgttcttg gatgggcttg
    49201 ggaggaaatt ttttgctcga tttcagagaa gaagttagtg tatcgtggtt ttctttatgg
    49261 accatattgt cccatttacg ggtttggggt aacgacagtt ttaatgatga ttttaccgtt
    49321 tcaaaataac ttatgggcct tatttatttt ttcgatgatt atttgtacgg tgattgaata
    49381 tgttaccgca acgattttag aagcattatt ccatacaaca tggtgggatt atcacaattg
    49441 gccactcaat gtaaaaggac gaatttgctt gccgatttcg attttttggg gatttgcttg
    49501 tattatcgtt gtacgcttct tgcacccact tgtcaccgaa tttgcagatt ggattttaag
    49561 ctggggtggc tggattattc ctgcactcat cgtggttctg atgcttattg atacgattaa
    49621 atctgtcaca agtatgctat cattccaaaa agcacttgcc gaatttaatg aaaaactaac
    49681 tgcccaagca aatgaactaa aagcaagcgt aaaagaacgg gcgaaagaat ttgaagaagg
    49741 acttttgaag aaacaagaaa atgttgatat gaaaattgct gaaatagaag caaaacgtaa
    49801 gcaagacaaa gaacttgctg ccagcatgcg caaacttaaa tttaatgaac gacgaatgtt
    49861 aaaatcgttc ccgaaaatga aagtgaaacg cgcggcgcca tttaagaatt tcaacaaaag
    49921 tttacttcgg gtcgataaac agaaaagaaa atagagaaac tgattatggc gcgaatggta
    49981 ttttttatca tttgcgcctt tttttgcgtt attttttaca aaacgtgtag aaagaacagc
    50041 ctatcttttg tatgattaag aagaaacatc gccccgcaaa gctccgttac ttcattctca
    50101 tttttgtttc aaagtagatt ttacctacct tcaagaagtt tcataatctc gctatatatc
    50161 aagctttaca agcaactttc acatatttgc aaataatagg attgttaaaa aagtcacaag
    50221 taaagcccaa tgatgtacat tctttccgca agttattggg atgaaagcgt gtacattttt
    50281 attagattta gatttataat taaaacgaac aggagggaac gacatgtatt tggatgagag
    50341 aagtaattca cttttaaaag aactcttacg acatcctgac acatcgagta cgaacttaca
    50401 agcaaaattc ggtttaactc gaagacaagt cgactatagt ttccaaaaaa ttaataattg
    50461 gctagaagaa cagacttacc cgaagattca tcgtgccgca aatggtcgat ttatcgtaga
    50521 acctgacctg tttcaaatca ttggtgagga agatggcgaa aaaacagatt ggtacatccc
    50581 gtcagaaaag gaacgcgcta gtctaatcat cctcatgtta acaacaggaa gtgaagagtt
    50641 atcccttaat cactttataa gcgagctgga ggtgagcaag aacaccgtat tacgagactt
    50701 gaagctggta caaaagacac ttgaaaaatt caaccttgaa gttaaatatt cgcggatgcg
    50761 tggctattta attgacggag acgagtggaa tcagcggacg gcactcattt atgcggcaga
    50821 acacatcata gaaagttttg gcggcgaaga gtatttacag gatttcatgc aagtggacga
    50881 agcgagaatt aaagagcttc gggaaaaatt ggaacaagtt gagcatcatc tgaatttgca
    50941 ttttattgac aataaaatgc aaatactgcc ttacatttta gaagctgttt ttcggcggat
    51001 gaagaagggg caaacaatta cgacatcttt cctgattgac tacaatgaat tgtcagatac
    51061 tcgggaatac ggagcagcag agatttttat tgaagaagag ccgaatatgc cagaagcaga
    51121 gcgaatgtac atcacattac aacttttaac ttccaatgta cttccgaaac aatatttgaa
    51181 atcggaggaa acgcacaagt taagactggc gctggaacaa gttctaagcg aatttgagaa
    51241 aaaggcttgt attcaactag tagacaaaga atcgttactt gaaaaattat ttgcacacat
    51301 taaacctgcg tattatcgaa ttaagtatca tcttacaaca gattacagca ttttagacaa
    51361 gattgatcaa gaattccaag ccgtgcatta catcgtgaaa gagtcgttag caccattaga
    51421 acgttttatt ggtagcaaag ttcctgaaaa tgaaagtata tttattaccc ttttcattgg
    51481 agggcattta atcgaatcca cagagaaatt acaaacgaga ctaaaagcag ttgtggtttg
    51541 tccgaacgga ttgtcgattt cgagattgat ggaaaaaaca ttacgaagcc tttttccgga
    51601 aatatttttc tatcaagcga tgtcgattcg agaatttgaa caaacaaagt taggttatga
    51661 cattgtattt tccgcagtgc cactttcgac cgacaagaaa tttttcctta tcaaccaact
    51721 gatggatggg aaagaacgcc tggagcttag acgccgggtg atgcgagcgg tttacttagt
    51781 ggatgaggtg aatatcagcg tcgatcaatt aatgaaaact atttccaaat ttgctgatat
    51841 taaagatgct gcccgtcttg aaaaagtgct agcagattat ttaatgccag ttccagaaga
    51901 aaacacatcc aaacacgaag gcaaaagcac actcgcagat ctactcgaag taacgcgaat
    51961 cacacgtaag aaatcagtga aagattggca tgaggcaatt tatcatgcgg ctttaccgtt
    52021 actttcggcg ggagtggtgg aaccagccta cgtggaagaa atgaaacggc aatatccggc
    52081 accgattatg aacatcattc tccgtaatac aatagctatc cctcatgctg aaacggaaaa
    52141 aggagtaaat agcctcggaa tgagcttgct ttatctagaa gaaggcctgc cacttgaagg
    52201 cggtaaagag ctacatttta tcgttgtcat tgcagccata gataaaaacg ctcacttcac
    52261 agctttacta caattgatgg aattatcgga gaacaaaaaa gaactgaaaa aacttgcgga
    52321 tgctgcgaac acagaagaaa tgcaccaaat aattaaaaac ttcacggact tggaaacaaa
    52381 aaagacaatg tagagaagtc agaaagaatt acaggaggat ttcgtaatgg atttagtaca
    52441 atttttgaaa aaaggaatgg tttgggttca atcggatatc gagaaacaag aggacctatt
    52501 ccaaatggtc gcagaaagtg gaaagtctga aggatatgta acggatgact ttttaacaag
    52561 actaacagac cgtgaacaaa cctttccaac ggggctaaaa ttagatggat acggcgtggc
    52621 attaccgcac acggatccag aatgcgttac ggaacaattt atcgccgtaa tcactgtgaa
    52681 agatggcatt ccatttaaat taatggaaga tgctggtcaa acggttgaag cgaatttgat
    52741 tttcgtactc ggactaaatg aacctcacag ccagctcgcg gtacttcagc aattgatggg
    52801 gacgattcag gataaagaca atgtagccgc attactcaga gcgaaagatg aagacgaagt
    52861 aaaacaaatt ttagaaacta ttaccgttta aaaaaaacag gaaaattagc cgcgggaaat
    52921 cgcagcaatt aattaggagg aatttatcat gggacaattt aaaattttgg tagcttgtgg
    52981 agcaggaatt gcaacatcaa cagtagtaac ggacagagta gaacgtttgg taaaagaaaa
    53041 caacgtggac gcagaagtaa aacaaattaa aatttcagaa gcagcatcta tgcaagacgg
    53101 agcggattta atcgtatcaa caactatttt accaacaact tacaaaatcc cagcgattat
    53161 tgcaacttct tacatcactg gcatgggtat ggaagaatta gacgaagaaa tacttgcgca
    53221 ccttaaataa aggctgcgca agggagttta gaaatcatca ttaaacagag aaaaaaggag
    53281 gaaatattaa atggatacac ttctgtcagg agtacagtat gttttaaact tggggcctac
    53341 agttattttg cctattatga ttttctttat tgcattaatt ttccgagtac cagcaaagaa
    53401 agcgcttcgt tcagcgatta cgattggtat cgggtttgta ggtattaacc ttgttattag
    53461 tttactatct agtaacttag gtccggcagc gcaacaaatg gttgagcgtt ttggactgaa
    53521 tttaacaatt attgatgcag gttggccagc agcagccgcg gcttcatggg cttctccagt
    53581 tgcagcaatt ttaattccaa tctgtttggt agttaactta gcacttattt tcttcaaagt
    53641 tacgaaaaca ctcgatattg atatttggaa ctactggcac ttcatcgcag caggtgcaac
    53701 tggttatatc gtaactggtg gtaactggtg gttcgcgatt ctttgtgcga tcatctatga
    53761 agttgctgtt ctttggatgg cagacagaac acaacctatg gtagaagaat tttacggatt
    53821 aaaagggatc tccttaccaa caggttctac agcagcattc ggtttcatcg gtattccggt
    53881 tggttggcta atcgctaaaa tccctggtat taaaaacatc catgttgacc cagaaactat
    53941 tcaaaaacgt tttggtattt tcggggaacc aatgatgatg ggtcttattc taggtattgc
    54001 aatcggtatt cttgcaggct atgacgttgg cgcagttgca caacttggta tgtccatggg
    54061 tgcggtaatg ttcttaatgc ctcgtatggt taaaatttta atggaaggtt taattccaat
    54121 ttcagaatcc gctcgtgaat tcatgaaatc tcgtttcaaa ggccgcgaac tttatatcgg
    54181 gcttgatgca gcactttcaa tcggtcaccc agcgaatatt tctactggtt taatccttgt
    54241 tccaatcact cttttcttag ctgttatcat tcctggtaac aaagtacttc cttttggtga
    54301 cttggcaact attccattct acgtatcatt cgtagtagca tctcgtaaag gtaacattct
    54361 tcactctgtt ttagctggaa ctgtagttat tgcactagcg cttcttatgg caactgactt
    54421 cggtcttgtt catacagaaa tgatgaaagg tgtttacgaa ttccctaaag gagcaacaca
    54481 agttagtaca cttgatatgg gtggtaactt ctttaactgg gttattctta aattctctca
    54541 agcttgggca gctattttct aagttttgtc ttaatgatat agaagaggtg atagtaacat
    54601 gagagcagct gtgttatacg agaataatgt aataaaagca gaacaaattg atgaagcgac
    54661 ttgtgggaaa gatcaagttc gtgtcgaagt aaaagcagtc ggaatatgcg gatcagatat
    54721 tcataaaatg cagactcgct ggaaataccc actgcctgct gtaatgggac atgaattcgc
    54781 aggtgtagtt acggaaattg gtagcgaagt aacaaacgta gctattggtg accgtgttgc
    54841 agggattccg ctcgagcctt gtatggaatg taattattgt aaagcgggcg actttgcatt
    54901 atgtgacaac taccggatgg tgggatcaca ttttcacggc ggatttgctg aaaatgtcgt
    54961 catgaaagcc gacaatgtca tttctatcgg cgaccttgat tttgaagaag gtgcgatgat
    55021 tgaaccactt gctgtatcaa tgcacggagt acttggtatt cagccgagac ttggcgatac
    55081 ggtgattgtc ttcggaattg gaaccatcgg aatcttggtt gtacaatgct tacttcttgc
    55141 gggagtaaaa gatattatcg cggttgatat cagtgataaa aagttagcag acgcgcggga
    55201 attcggttgc aaatacacta ttaatccaaa aaacgaagac ttaaaagaac gcgtttttgc
    55261 ttatacaaat ggtcttgggg cagatatagc gctcgagtgt gctggttcca aaataacgca
    55321 agaacaatgt cttcttgtaa caaagaaaaa aggtaaagtt ggttttctag gaatagctta
    55381 cgcagatgtg cttttacacg aggaagcttt tgaaaatatt tttagacgtg aacttacgct
    55441 gaaaggtttt tggaattctt actcggcacc atttcctggt gaggaatggc gtacgtcgat
    55501 tgaattcgtg aaacaaggtc gaattaaact gaaaccacta atttcgcatc gttataagct
    55561 agaagaaacg aaagaagcgt ttgatatgat tctttccaga gagcatgatt ataacaaagt
    55621 gatgatattg ccgcagaaag gtgacgatta atttgaaagc agtagtaaaa acaaaccccg
    55681 gatatgatca aatggagcta agagatgtag aagaaccaca agtctatggc gacaaagtaa
    55741 aaatcaaagt agcattcact ggtatttgcg gatcagacat ccatacgttt aaaggtgaat
    55801 acaaaaatcc aacaactccc gtcacactgg gacatgaatt ttctggtgtc gttgtagaag
    55861 ttgggccaga tgtaacaagt atcaaagtgg gagaccgtgt cacaagtgaa acaacttttg
    55921 aaacttgtgg agaatgtatt tattgtaagg aacgtgatta caatttatgt agcaatcgtc
    55981 gcggcattgg tacgcaagca aatggtagtt ttgcagaatt tgttttatct cgcgaagaaa
    56041 gttgtcacgt gcttgatgaa cgtatttcgc tcgaagcagc agcactaaca gaaccgcttg
    56101 catgttgtgt gcattcggcg cttgaaaaaa caacgattcg tccagatgac acagtacttg
    56161 ttttcggacc aggtccaatt ggtttgttac tagctcaagt tgtgaaagcg caaggggcaa
    56221 cggtgattat ggcaggaatt accaaagata gtgaccgctt acgtctagca aaagagcttg
    56281 gaatggaccg gattgtcgat actttaaaag aagacttggc tgaagttgtg cttggcatga
    56341 cagatggtta cggagcggaa cgcgtatttg attgttctgg cgcagtaccc gctgtaaatc
    56401 aaggattacc tctaacgaag aaaaaaggcg attttgttca agtaggactt tttgccgaaa
    56461 agaaaaatgc gattgatgaa gaatccatta tccaacgtga aattgcttat atcggcagcc
    56521 gttcgcaaaa accatcttct tggattttag cgctcgactt actggcaaat ggcaaaatca
    56581 atacggataa aatgattact aaagtatacg gtttggatga ctggcgcgag gctttcgagg
    56641 cagttatggc aggaaatgaa attaaagtat tagtgaaatc ttaataatgg aggatgggct
    56701 gtatgaaaaa acatcaaaaa aaggataacc gtgcaaacga atccaaagct tctcgggctc
    56761 agatgtttta cagtagtcat ccttagaaat gagccgagaa catattcgcg tatgttctcg
    56821 gttccatttc attataagac gttaaaagaa aaaaatctat taatgaaggt gaaattaaat
    56881 gaaattaaca attggttgcg accacggcgg acgtagacta aaagatgcca ttgtgaaaca
    56941 tttacgtgaa aaagatattg aagttgttga tattggaaca tatacagatg aaagtgtcga
    57001 ttttccatct tatgcagaag aagttgccaa tcaagtagta agcgggcaat ctgaactcgg
    57061 tattttgtgc tgtggaactg gaataggtat gagtattgct gctaacaaag tggacggaat
    57121 ccgtgctgcg gttgtttcgg atactttctc agcgcgtgcc acccgcgaac ataacaatag
    57181 caatgttctc tgtctaggcg aacgtgttat cggtgaagga ttagcgcttt taattgttga
    57241 tacttggctt gaggcatcat ttgcaggaga tcgccataaa cgccgattgg ataaaattac
    57301 tgaactcgaa agaaagtgag gatgaacatg aggaaaatag ccgcttcaat tatgtgtgca
    57361 gaccaactac atttaggtga agagctccgt cgccttgaat ctgctggtgt ggaactacta
    57421 cactgcgatg tgatggacgg tgtatatgtg aataatcttg cgctcggtcc agaatatttg
    57481 gaaatagtgc gaaacaatac agaaatccct ctagacatac atttggctac gattacccca
    57541 cttaaatata ttgacatgtt tggtcctgtg aaaccggaat atatttcttt tcatgtagaa
    57601 gtagcggaag acgtgtcaga agtcatccgg aaaatccgct cttacaacgt taaaccatcg
    57661 attgcgataa atccagaaac acctatcgaa gccatttatc cttatttaga tgatgtcgaa
    57721 atggtgttaa tgatgactgt aaacccgggt tttgcgggac aaaaatttca aacagatgta
    57781 ttacaaaagc tacatgattt aaaagcaaaa ctagctggaa aagtccatgc gccgctcatt
    57841 gaagtggatg gcaatattaa taaagaaaca gtaggcttaa tgcgagattg cttaccagac
    57901 atttatgtac taggcacatc cgcgttattt catgaccgag ataaaacgag ttatgcagaa
    57961 agactagtac acatttggtc agatgtagaa aaacatgtgt aataaagcac aaacaattta
    58021 agggagatga cagttttgaa aaaaacatta gatagacaag ccgtggacac gattcgttcg
    58081 ttatccattg atatgattga gaaagcaaat tcaggacacc caggaatgcc gatgggagca
    58141 gctccaatgg cgtatatgct atttgcgaaa catttagtat tcaacccagc caacccagaa
    58201 tggtttaacc gcgatcgctt tgttttatca gcaggacacg ggtctgcgct actttatagc
    58261 atgcttcatt tatttggtta tgatgtaaaa atggaagact taaaacagtt ccgtcaatta
    58321 gatagtttga caccaggaca ccctgaattt ggatggactg ctggagtcga tgcaacgagt
    58381 ggcccgcttg gacaagggat tggtatggcg gctggaatgg cgcttgcaga gtctcattta
    58441 gcggcggagt ataaccaacc aaattatcca attgtcgacc attatacgta tgcgatttgt
    58501 ggtgacggag acttgatgga aggcgtggca tcagaaacag cctcacttgc aggacattta
    58561 ggacttggga aattaatcgt attgtacgat tccaatgata tttgtttaga tggagattta
    58621 agcgcaacgt tcagtgaaaa tgcagcagac cgtttccgcg catacggctg gcaagtttta
    58681 cgtgtagaag atggcaacaa tttagcggca attcaagaaa aaattgttca agcaaaatta
    58741 gaaacatcga aaccaacgct aatcgaagtg aaaacagtca tcggttacgg cgcgccaaca
    58801 aaagcaggca gctccgcaag tcacggtgct ccgctcggtg aaaaagaagc aaatggtgca
    58861 aaagagcatt acgaatgggc agaagagcct ttcacagtac cagccgaagt tcgtgattac
    58921 ttaagaaatt acaaagctcg cggggaaaaa ctagagggtg cttggaacac aatgctcgct
    58981 aattacaaaa aagaattccc agaacttgca agtcaattag accgcgtgtt agcgggagaa
    59041 gtagctgccg attggaacgc taatttgcca acttttgaag caggcacaaa tgttgcaacg
    59101 cgctctgctt ctgggaaaat gattaacgca attgcagccg aattaccgga acttttcggg
    59161 ggatccgctg acttaggttg ctcgaacaaa acatttattg atgcgagccc agcatacagc
    59221 attcaagacc cagctggtaa aaatatctgg ttcggtgtgc gcgaatttgc gatgggagca
    59281 atgttaaacg gaatggcact tcatagcggt ttgcgagtgt ttggctcgac tttcttcgtc
    59341 ttctcagact atgtccgccc agcaatgcgg atggctgctt taatgcaact tccagtaacg
    59401 tatgtattca cgcatgacag tatcgctgta ggtgaagacg gcccgacaca tgaaccaatc
    59461 gaacaactag cctcgcttcg tgctatgcca ggcctaacag ttattcgccc agccgatgcc
    59521 aaagaaaccc gcgctgcttg ggaaattgcc gcaactaaca caaatggtcc aatcgcactt
    59581 gtattatcac gccaagactt accagtgctt gaaaatgcac aagaagaagt ggatgcaggt
    59641 gtagataaag gtgcttatat cgtagcacca gcaaatagtt ccaaaccaga cgctatcatt
    59701 atcgcaacag gatcagaagt gtcccttgca attgaagcga aagccgaact tgcgaaaaaa
    59761 gatatcgacg tttccgttgt tagtttatcc agctgggaac gctttgaaaa aacaaccgat
    59821 gcttataaag aaagcatttt accaaaagaa gtcacagcga gatttgcgat tgaagcagga
    59881 gcaacattcg gttggaaaga atttattggg tcagaaggcg atatgttagg aatcgatcac
    59941 ttcggcgcat ctgcccctgc gaaagatttg tttaacgctt atggatttac accagaaaat
    60001 gtggcggatc gtgtcgaaac tgtgattgcg aaagccggtg tgcgcgtatg acattcgtag
    60061 cgccatcgtt actcgcagct gattatatga acatggcaaa ctccattaaa gaagcagaac
    60121 atgccggagc tgactacctt catatcgatg tcatggacgg acattttgtg ccgaatctga
    60181 cgtttggaat tgatatggtc gagcaaatca agaaaacagc gactattcca ctggatgtcc
    60241 acttaatgct ctcgaaccca gaaaactata ttgaaaaatt tgcagcagct ggggcgcaca
    60301 ttatttccgt gcatatcgaa gcggcgccgc acatccaccg cgtcattcaa caaattaagg
    60361 cagcgggctg taaagcggga gtcgtgctta atccaggaac accggcgagc gtgctggatg
    60421 ccgttttagc agatgtagat ttagttttac aaatgaccgt aaatccaggg tttggtggac
    60481 aagctttcat tgattctacc atcaaaaaca tgcgctatct ggatcattgg cgccgagaaa
    60541 ataacggcag ctatgtgatc gaagtcgacg gtggtgtaaa tgccgaaacc gcagaaaaat
    60601 gtaagcaagc gggcgtagac gttcttgtag caggctctta cttctttaga gcagatgata
    60661 aaattgcttg tattaaagaa ttaaaagcgt aacaaaaaaa gtgctacaaa ccaactagcg
    60721 gtttgtagca cttttttatg gagtggttta acttctttta aagaaaaaga agctagtaga
    60781 taacaacgtc aataaacttc ctagtgcaaa aaagagagca tcttttgaat caccagtagt
    60841 tgggaggata ttagaggtgt ttttatcaac tttttttgtt gcttcggatg aaatcacagt
    60901 atcattagta ctcagtgtag tattgtcggt catttctcca ttggtatttg tattatcact
    60961 gtttgctatt ttttcataaa tataggtaac agttgcaggg gttgtgctaa aagtacccga
    61021 ttcatttcct tccacttttt gaagtttata gcctgctatg tctttgcttt tagtttggta
    61081 ggtattaatt acttcaccgg ttaaaacagt atcttttgct agtgttttac ccgattcatc
    61141 ttgatatttt acagtgactg tcccattttg gacagcagtt ttttcataaa tatacgttac
    61201 attttgcagt gtttcagaaa attgtcctgt cgcatttccg ggtgtttctt ttaaagtata
    61261 gccatctatt attttaggag tagtgacgta attttcacca atactaccat ctaatctagt
    61321 agaagtagct aattcattcc cagacgcatc tttataggaa actaggactg gtttagtata
    61381 cttgaagtag ataaatggct ttccagaagg accatattca gaaatatcat agtaagaatc
    61441 aaatcgattt gtcccagtga aaagtgaaaa agtagattcg agtggctctg ctgaaaagtt
    61501 taatgctttt tcggcttgat tatacgtaat accattcgct aaatcagtta tgaataaatt
    61561 atctgtagtc aaatgagccg aagcatcttg aaactgaatg taattttcta taggtaggat
    61621 gtggttgctc ggtacaatga gtgtacttaa aactgtttga gcggcaaaag cttgataagc
    61681 catttgaaga tttgggtttt gaattgtaat attagtaata aaattatttt caaaggcaga
    61741 agcatcaata ctttcaacag tggctggtgt agtcactgtt tttaaattat tcgctaaaaa
    61801 tgcttgggaa ggaatatttt ttaaagcagt agaataagtt attttttcta atttattgac
    61861 actaaaagag ttccttccta tagtctgcac tgagttgggt aagactagtt gttcaagtga
    61921 attgatggta aaagcaccat cgccaatagt tataactgta ttaggaatcg ttacattagt
    61981 taatctcttg gatttgaatg cgccattccc gatagcagta acggtatatt cattattagg
    62041 accaagtgtt gtaggaatgg taatatcagt agactgtcct gtataatcag taatggtagc
    62101 ttcatttcca tttattgtat attcatagtc accagatgtt tcggcagaac caatagttgg
    62161 aaataaaaac aagaatatgg caaaacaaaa aataccccaa aatcttcttt gtaacacaga
    62221 aaagccccct tacttgagtt tttttatatt ttcccttaca caaaacatct aaacttttct
    62281 atattcatat ctgtgtggaa taagtttttt ttaattgata catgtctagc actagcttat
    62341 acttaaatta atacgacaac gaaaaggaag agatatatga cacaactagt atttcgaaac
    62401 gggacagaac aagacacgac gttaattctt cgttttatta ccgaacttgc aattcatgaa
    62461 ggcattgaaa aagatgtagt agcaaccgaa tccggcctac acaaagccct ttttcaagaa
    62521 aaatctgccg aagtaattat cgctgaatac gaaggggagc cagttggttt cgcactcttt
    62581 ttccataact tttccacatt acttggcaaa aaaggcttat acctagaaga cctttacatc
    62641 attccagaaa tgcgcggaaa aggctttgga acaaaatttt tcagctattt atccaaactc
    62701 gctttatcac gcgattgcgg cagatttgaa tggtggtgcc taaacgaaaa taaatcaggc
    62761 atggattttt acgaaaaaat tggcgcagag aaaatgtcag aatggaccgt acataggctc
    62821 actaaagccg aaatgaaaaa aataagcaac ctatgaaagg atgggattta aatgaaatgg
    62881 gataaactat taaatgataa acgccgccgc gaatccggtg tcactcgttc gaaaaacacc
    62941 gacgtacgta gcgctttcga aaatgatttt cagcgtatcg ttatgagtgc atcgtttcgc
    63001 cgtttacaag ataaaaccca agtattcccg ctagaaaaaa gtgattttgt gcgtacacga
    63061 ctaacccatt caatggaagt aagtacaatc gcaaaatcaa tggggaacat ggttacacac
    63121 acgattcaag aagaaaactt agacaaagat tttacaaaag atcatgcgga taaaattccg
    63181 gaaatccttg cttgtgcagg acttttacat gatatgggca atccgccgtt cggtcacttt
    63241 ggtgaagaaa gtatccgtga gtggttccgc gacaatttag caaccatcac ttacaaaaat
    63301 aaaaacctag ctgaaatcct aacaccgcaa atgaaagaag acttttatta ctttgaaggt
    63361 aacgcgcaag tgcttcgtgt agtttccaaa ctgcattatc ttttcgacca atacggctta
    63421 aacctaacat ttgccacttt aaatgcggtc atcaaatacc cagtttcttc cttaaaagta
    63481 aataaaaaac aaatcaaaag caaaaaacta ggctattttt atgccgatga atcacttttt
    63541 aatgaaataa caacagcaac agaagcgctt gataaccgtc atccgctcac ttatttacta
    63601 gaagtggcag acgacatcgc gtacctaaat gccgacctag aagacggcgt gaaaaaaggt
    63661 atcgtcaaca tcacgcaaat cttaaaaggt tttgaagaag tagaagagca taataaagta
    63721 actgccgcgt gctacaacga acttaagaaa aaaagcgagc gctacgaagg gcaagaagaa
    63781 agtttcatcg tacaacaatg gctcgcatcg aacgtccgcg gccaattaat caatcgctca
    63841 ctcgaagtat tttacgagaa ctacgacgcc atcatggcag gcacattcaa cgactcactt
    63901 atcgatgctt caagcgccga acaactcgta caaattttac aaagcctatc attcacgtac
    63961 atttaccaag ataaaggcat tgttgaatcc gaaatcgccg gcaacgaaat catctccaaa
    64021 ttgctcgaaa cgttcatccc agctgtgatt tactacgaca gcgaaacacc agaacgccaa
    64081 acagccaaag ataaacgcct actaaccttg atttccgaca actacctagg ctgttaccgc
    64141 aaaaacgcag aaggcgaaag cgaaacaatg aaactgtact tgcgattact tctcgtaaca
    64201 gacttcattt gcggcatgac cgacagctac gcgaaagatt tatatcaacg tttgaatgga
    64261 cttagctaat taactaaatt tcaagtaaca ccttgacatc cgaacgtcaa ggtgttacta
    64321 tattcaaggt gcctctacta taaacagagg tctgaaaata aaacagcgtt gtaggttgaa
    64381 cttacagcca ttttatttta ccgaaaaaat gaaccacctg gatgtgtgga actactaaac
    64441 aaggaaggag gaatttatcc catgcctaca attaaccaat tagtacgcaa acctcgtcaa
    64501 tctaaaatta aaaaatctac atcacctgct ttgaacaagg gcctaaacag ttttaaaaga
    64561 gaactaacag acgttaactc tccgcaaaaa cgtggcgtat gtactcgtgt tggtaccatg
    64621 actcctaaaa aacctaactc ggcgcttcgt aaatatgccc gtgtacgttt gagtaatggt
    64681 attgaagtaa cagcttacat tcctggtatt ggtcacaact tacaagaaca tagtgttgtt
    64741 cttattcgtg gtggacgtgt aaaagattta ccaggggtac gttatcatat cgttcgtgga
    64801 gcgcttgata cagctggtgt tgaaaataga ggacaaagcc gttctaaata cggtacgaaa
    64861 aaacctaaaa aataatactt ataaaatatg aaaggaggat atccgatgcc tcgtaaaggt
    64921 cctgttgcta aacgtgacgt gttaccagat ccgatttata attcgaaact agtaactcgt
    64981 ttaattaata aaatgatggt tgacggaaaa cgtggaaagt ctcaagctat cctatattcc
    65041 gcattcgata tcattgcaca agaaactggt aaagatccga tggaagtatt tgaacaagct
    65101 atgaagaaca ttatgcctct tcttgaagtt aaagctcgcc gtgtaggtgg tgctaactat
    65161 caagtaccta tcgaagtacg tgctgaccgt cgttctactc ttggtcttcg ttggttagta
    65221 aattatgctc gccttcgtgg agagaaaaca atggaagtac gtgttgctcg cgaaatcatg
    65281 gatgctgcca ataatactgg tgcttctgtt aagaaacgcg aagatacaca caaaatggct
    65341 gatgctaaca gagcgttcgc tcactatcgt tggtaaaaaa atcactgaca aattccaggc
    65401 gtattgcctg aaaaattgtt ttatggaagg agaaatacaa catggctaga gagttctcct
    65461 tagaaaagac tcgtaatatt ggtatcatgg cccacattga tgcgggtaaa actaccacta
    65521 ctgaacgtat ccttttctat acagggcgta ttcacaaaat tggtgaaacc catgaaggtg
    65581 cttctcaaat ggactggatg gagcaagagc aagaacgtgg tattactatc acttctgctg
    65641 cgacaacagc tcaatggaaa ggctaccgag taaacattat cgatacacca ggacacgtag
    65701 acttcacagt tgaagttgaa cgttcgcttc gtgtacttga tggtgctgtt gcggttctag
    65761 atgcacaatc tggtgtagaa ccacaaacag aaacagtttg gcgtcaagct actacttacg
    65821 gggttcctcg tgtagtattc gtcaacaaaa tggacaaaat cggcgcagac ttcctatatt
    65881 ctgtaggtac tttgcatgaa cgtttggctg ccaacgcgca cccaatccaa ctcccaatcg
    65941 gggccgaaga tacatttgaa ggtatcattg acttaatcga aatgaacgcg ttgtattacg
    66001 aagatgattt aggaaatgac cctcatatta aagaaattcc agctgatctg aaagacttag
    66061 cagacgaata ccgcggtaaa ttagtggaag cagttgctga acttgacgaa gagctaatga
    66121 tgaaatacct agaaggcgaa gaaattacaa aagaagaact taaagctggt atccgtaaag
    66181 gaacacttaa cgttgagttc tatcctgtag tttgtggtac agcattcaaa aacaaaggtg
    66241 ttcaaccaat gttagatgca gtacttgatt accttccagc accaacagat gttccagcta
    66301 ttaacggcgt attgcctgat ggagaagaag ctgctcgtca cgctgatgat tcagaaccat
    66361 tctcttccct agcattcaaa gttatgactg acccttatgt tggacgctta actttcttcc
    66421 gtgtttattc cggtactttg aattccggtt catatgtaca aaactcgact aaaggtaaac
    66481 gtgaacgtgt tggacgtatc cttcaaatgc acgctaatca ccgtgaagag atttcaatcg
    66541 tatacgctgg tgacatcgct gctgccgtag gacttaaaga tacaactact ggggacactt
    66601 tatgtgatga aaaagaacaa attatcttag aatccatgga attcccagaa ccagttatcc
    66661 aagtcgctat cgaacctaaa tcgaaagctg accaagataa aatggggcaa gctcttgcga
    66721 aactagcgga agaagatcca actttccgtg ctgaaactga ccaagaaact ggccaaactc
    66781 ttatctccgg tatgggtgaa cttcaccttg acatccttgt tgaccgtatg agacgtgaat
    66841 tccgcgttga agctaacgtt ggtgatccac aagtttctta tcgtgaaaca ttccgtaaat
    66901 ctgctcaagt tgaaggtaaa ttcgtacgtc aatccggtgg acgtggacaa tatggtcacg
    66961 tttggattga attcggacca aacgaagaag gtaaaggatt tgaatttgaa aatgcaatcg
    67021 ttggtggggt tgttccacgt gaatacatcc cagctgtaca agcaggtctt gaaggcgcac
    67081 tagataatgg tgtacttgca ggctacccac tgattgacat caaagcaaaa ctttacgacg
    67141 gatcttacca tgacgtcgat tccaatgaaa tggccttcaa agtggctgct tcaatggcat
    67201 tacgtaatgc tgctaagaaa tgtgatcctg taatccttga gcctatgatg gctgtagagg
    67261 ttgttatccc agaagaatac cttggtgata tcatgggtaa cattacttcc cgtcgtggtc
    67321 gtgtagatgg tatggaagct cgcggtaacg ctcaagttgt tcgcgcattt gtaccacttg
    67381 caaacatgtt tggttatgca actcaccttc gttcaggtac gcaaggtcgt ggtgtataca
    67441 ctatgcaatt tgaccactat gaagaagttc ctaaatctat tgctgaagaa atcattaaag
    67501 ctaatggtgg aaacaacaaa gaagattaat tgattttttt cgcaacatca agtataactt
    67561 tagttagaag tattacttag tttaaattta agctaagtaa aaaataatta tcgaattatc
    67621 gaggaggata ttttaaaatg gcaaaagaaa aatttgaccg ctctaaaccc catgttaaca
    67681 ttggtactat tggacacgtt gaccatggta aaacaacttt aactgctgca attacaactg
    67741 tacttgctaa aaaaggctat gctgatgcac aagcttatga ccaaattgat ggtgctccgg
    67801 aagaaagaga acgtggtatc acaatctcta ctgctcacgt tgagtaccaa actgacagcc
    67861 gtcactatgc acacgttgac tgcccaggac atgccgatta cgttaaaaac atgatcactg
    67921 gtgctgcaca aatggacgga gctatcttag tagtatctgc tgctgatggc ccaatgccac
    67981 aaactcgtga acatatctta ctttcacgtc aagttggtgt tccatacatc gttgtattca
    68041 tgaacaaatg tgacatggtt gacgatgaag agttactaga attagttgaa atggaaattc
    68101 gtgatctatt aactgaatat gaattccctg gcgatgacat tcctgtaatc aaaggttcag
    68161 ctcttaaagc acttcaaggt gaagctgact gggaagctaa aattgacgag ttaatggaag
    68221 ctgtagattc ttacattcca actccagaac gtgatactga caaaccattc atgatgccag
    68281 ttgaggatgt attctcaatc actggtcgtg gaacagttgc aactggacgt gttgaacgtg
    68341 gacaagttaa agttggtgac gaagtagaag ttatcggtat tgaagaagaa agcaaaaaag
    68401 tagtagtaac tggagtagaa atgttccgta aattactaga ctacgctgaa gctggcgaca
    68461 acattggcgc acttctacgt ggtgttgctc gtgaagatat ccaacgtggt caagtattag
    68521 ctaaaccagg ttcgattact ccacacacta acttcaaagc tgaaacttat gttttaacta
    68581 aagaagaagg tggacgtcac actccattct tcaacaacta ccgcccacaa ttctatttcc
    68641 gtactactga cgtaactggt attgttacac ttccagaagg tactgaaatg gtaatgcctg
    68701 gtgataacat tgagcttgca gttgaactaa ttgcaccaat cgctatcgaa gacggtacta
    68761 aattctctat ccgtgaaggc ggacgtacag taggcgctgg cgttgtttct aacatcagca
    68821 aataatacct gatacgattc aaaccgacaa agtcatttgg ctttgtcggt ttttttgtgc
    68881 ctgaaataaa aattaacttg aaaaatatca cattttcgca taaccttaaa gtagacatat
    68941 ctttttacct tctagaccga aatcaaggag gtaggccaag tggtacaatt tgatgctcga
    69001 aatatggcgt tgctcgaatc actcgttgtg gcgaatgtat atcttgcacc cgagaaatta
    69061 caagaagaac taggaatttc caaacgaaca cttcaatatg atgtggaaaa aattaataaa
    69121 gaattagata atataggact cgatggtatt caatctgttc gtggacaagg gtattattta
    69181 ttagaagatg aaaaatcgac aattaaagaa atccttggaa atagggaagc gagccacaaa
    69241 gtcttttcag caagtgagcg tcgcatccgt attttatttt ttctgctcgt aacagatgcg
    69301 cgagtaatca ttgatacgat taatgaatgc aatgaagtca gtcgtaatac aagtttgcag
    69361 gacattaaac aattaaaatt agcgctaaaa cagtttaatt tagaacttgc gtatgaccgt
    69421 aaaaatggca atatggttct cggtgatgag cgcagtattc gccaattttt tattcactat
    69481 tgtatgaata acgaagaaat cgcaaccgca gaccagttgc tcgatttaat gaaaattaat
    69541 ccgatgataa aaaatcagga gttatttccc aaattagata cgattttcga aattttagca
    69601 gtaacggaga aaaaaatcgg aattcgttat actgacgagg tccttgagcg cattggtatt
    69661 atgattttct tctttaaaga acgaatgaag cgtaattgct atttaaatga acaagaagag
    69721 catgaagtag aatcttttga gattgcgcag gaaatttatc agcaattgca gcaaagtgag
    69781 aattttaaaa tcaatcatgc ggaaatcact tatttaggta aacttttgct tggggcgagt
    69841 cgtttgaatg atgatgcggc tgctgaagga aaattagatc tcatcgttga aaaaatcatc
    69901 gccgaatttg aacgtcttgc ttgcgtgaat tttgaagacc atcgcaattt gaaaaaagat
    69961 ttattgcttc atttacaacc agcctactat cggcttaaat tccaaattga gtggattaac
    70021 ccgctaagga cagacattaa acaaagttac agtgatgtgt acgagattac gaaaaaatca
    70081 cttgaaccgc tagaagattt acttggtgaa acaattccag aggatgaaat agcgtacgta
    70141 acaatcttgt tcggtggcta tctttcacgc aaaaataata ctttagttga acgaaaaaaa
    70201 ctcttaatcg tttgctccaa aggtgtcgga acgtcgcgga tgattgaacg gcaattatcg
    70261 caattacttg gtgagcgagt agagatatta gaaccaattt ccatccgtga atttgaaaaa
    70321 gggttatacg caccagactt tattgtgtcg actttgccaa ttatggaacc aaaagcacca
    70381 gtttttatcg ttagtccaat tttgacagaa gcgcagaaac aacaactgat gaaggcgatt
    70441 gccccgcaca ttttgcaaaa ggactcggat gcgcgcatgt tgtcttctgt gcttgatgta
    70501 gtagatcaat atgccaaagt ggaagaccgc gagaaattgg cggcaaaact gaaatcggta
    70561 ttgttccaag tgcaatcaga cagccaacta gaaaaatctc caacactcga agaactttta
    70621 ccgaaagaac gaattacttt taaagaaagt gtggcggact ggcgtgaggc tatcctagtt
    70681 gcctcgaaat cgctgcaaca agaaggctac atttcgagaa attatcagca tgcgatgatt
    70741 gaaaatattg agaaactcgg accatacatc gttattgcgc cagggattgc actgccacat
    70801 gcgtctgtgg atgacggggc ataccgagtc ggaatgagct tactgcgctt aaatcagcca
    70861 gtatcatttt caagtaaagc gaaagatcaa gtgaagttaa ttattgtgct cgcttccatt
    70921 gactcctaca cacatattaa tgcgctgagc caactcacta atttaatcat gaaacatcac
    70981 ttgctagagc agattgaaca agcgacatca gcagcggaaa ttgccgcaat gttaacgata
    71041 caataagcaa gaaagccagt ggggcaccaa gatgccgcgc tggctttttg tatgctcgct
    71101 aacaacaaaa tgtaacagtc tattttttgc actttcgaaa agaaaggaat tgggcttttt
    71161 taaacagttg cgctacagct ataataagag tgtaagttat tgatagcgct atcaattagt
    71221 tagaagggat gaagagatat gtcttttttg gataaagagc ttgtgaatct gcatggatca
    71281 gctaagaatg ctgacgaagc tatcgtgcaa gcaggagaat tattagttaa tgcaggttat
    71341 gtgagcgagc agtacgtaga aaaaatggtg gaatcttatc atgaaaatgg tgcgtacttt
    71401 gtcattgcac ctcaaatagc cattccgcac gcaagaccaa ctgatggtgt ggaaaactct
    71461 gcagtatcac tagtcgtact aaaagaaggc gtgaatttcg gacacgccgc gaatgatccc
    71521 gtacgattag tattcggtct tgcagcaact tcaagtgagg cacatttgaa agtcattcaa
    71581 aaaatcgtct ccttgcttag taacaacgat aatattgaaa aattgattca ttcagaagat
    71641 taccaagcaa ttggagaatt agtggaggga taacgatgaa aattttagca gtatgtggac
    71701 ttgggcaagg aacaagctta attttacgaa tgaatgtaga gacagtttta cgcgacatgg
    71761 gagtagatgc agacgtggag cacattgatg tatcagctgc gcgctcgatg aatgtggata
    71821 ttattgtaac gagccaagag ttagcagaaa cacttggaac agatacaagc gccaaagtag
    71881 tcatcgtcaa caactatttt gacaacgcag aaattaaaac ggcattatct gaagcaatta
    71941 atagttaaat aagacaaaaa aaggtgggaa aaaaatggag attattacgt ggattgccaa
    72001 taactttttt ggaaccccag ccatactttt aggttttatc gtacttctcg ggttactttt
    72061 acagaagaaa aatttaagcc aagtgattag cggaacgttc aaagccatta ttggattctt
    72121 aattattaac gctggtgcgg ctgttattac tggttccctt gggatttttg aaccaatgtg
    72181 gaaagaagta ttcggacttg aaacaccgcc acttgcaggc tttttaggac aagaagcctt
    72241 taatgcaaaa tttggtagtg cggtaacact tgcgatgaca ctcggatttt tagtcaacgt
    72301 attattagca cgatttacac catttaagta catttattta actggtcata tgatgttctg
    72361 gacaacgacg atttttgcag gaatcactgt gcaagctgtc ggcggggata ttccgttctg
    72421 gggtcttgta ctcttcttag cagtaattat gggtctttac tggacattac aaccagcgat
    72481 tacacaacca ttcttacgta aaattactgg aaatgacaac gtcgcgttag gacatacttc
    72541 atccagtgta gcgattctat ccgctttgct agggaaagta tttgggaata agaaaaacga
    72601 tgcagaacat attaatttac cgaaaaaatt agagttccta cgtgactcta acgttattac
    72661 agctcttaca atggggattc tgttcgtagt tggtgcagtg attctgatgg tgaagaaaac
    72721 accgggagca gaaaaattaa tcgcagaagc tggaaatcaa agcttcatcg tatactccat
    72781 cgttcagtcc tttacgtttg ccgctggtat cgccatcgtt cttgtaggtg tgcggatgtt
    72841 tatcggtgaa atcgtaccgg ccttcaatgg tattgcaaca aaacttgtac cgggtgcgaa
    72901 acctgcacta gatgcgccaa tcgtttatcc atatgcacca aactccgtaa ttatcggttt
    72961 cgtaggtgcg ttcattggag cgattatctg gttagtagta cttggaaata cagttggcta
    73021 cgtgtttgtg ccaacaatga tcgttctttt cttccacggg gcagttgctg gtgtattcgg
    73081 taactcaact ggtggggtga gaggagcctt gataggtgga tttttaacgg ctacggttgt
    73141 tgcttgggga caatatatta tggttacctt ctttatcaat acgactgttc cagatacagc
    73201 aatgtgggca gccgactcag atatgtttat cctcggacca attgtcagca tgttagcgaa
    73261 gttattcttt taagtaaaat ctaaacctct tccttgtcta gcattcaaga ggaagaggtt
    73321 ttttgaaagg aagttttaaa aaatgagttt tattcgtact ttttatggag atattgcccc
    73381 tgaacaactg ggcttcactt attcacacga gcacatcgtt tgtgtaccag cttactggca
    73441 agagcgagat gccgatgatt tacttttgga tgataaagaa aaatcacaac ttgatgtaca
    73501 agatttcgcc gatttaggag gcaaaacaat tgtcgatgca accgcggttg attacggcag
    73561 acgtgtgctc gatgtggcgc aaatttccaa agaaacaggc atccaaatcg ttggaacagc
    73621 tggctttaac aaaagtttct tatgggacgg gaagattaaa ccagaactga aaccaatcat
    73681 cggggatttt gaaacctact atgaatggat tgaaaatact actacagaca aactaacgga
    73741 attcgttgta aatgaagtcg aaaatgggct tgaaggaacg ccgtataagg ctggtcaggt
    73801 gaaatttggc actggctaca atatgattac acctttagaa gaaaagacaa tacgtgcggt
    73861 tgcaagagca catcacgaga caaaagcacc aattcattct cacacagaag cgggaacgat
    73921 ggctttagaa caaatcgaga ttttaaaaca agaaaatatc ccgttagaat acctttctat
    73981 tggtcatatg gaccgcaacc tagatccgta ttatcacaag caagttgcca aaacaggcgc
    74041 attcatgtca tttgatggca tcgcaaaaat caaatacgca ccagaaagcg ctcggattgc
    74101 agcgattcta tatctagttt cggaaggctt tgaagatcaa attttagtta gtggtgatac
    74161 agcacgcaaa acttattata aacattatgg tcacggacca ggacttgaat atatcgccaa
    74221 aaaatgggtg ccacgcttta ttgatgaagc aaacgaaaaa ggctttgacg gagaaaaatt
    74281 agttaaaaaa ttcttcgtgg ataacccagc aagatgtttt acttttaaaa aataggaggc
    74341 gaaatctgtg ttatatgcag atgaaaattc atttgatatt ggcgcgaaaa tcacgaaaac
    74401 aaaaccagtc cttttgccaa taggagcagt cgaagcgcat gggccgcatt tgccactagg
    74461 gacagacaat attttagcgt cagaatattc agcgaaaata gcggcggaaa cgagcggatt
    74521 cgtgcttccg gttttgccat acggccaagt ttggagtttg caagatttcc ctggaagttt
    74581 aacactatca aatgaaacgg taacgaaagt agttgtagag attggtgaaa gtctatataa
    74641 acaaggattc cgtctgtttg tcccagtgag tggacatctt ggcaatatgg ctgcgctaaa
    74701 agatgcagcg cgcgaactat atgcaaaata tcctgatatg gttatcttgc acatttttta
    74761 cccgaatatc caaaaattag caatggacgt gcgcgaagga aacgctaacc atcatacgta
    74821 tattcatgcc tgtgaaatcg aaacatctct catgctctac ttgtccccag aaaatgccga
    74881 tatgagccgc gccatagatg atccgccaat tttaccaatc gatgcggatt tcaccccaac
    74941 accgtggcaa aacttcacga agacagcggt tctgggagaa gcaactttgg caacagcaga
    75001 aaaaggcgaa tacttgattg aaaagacgtt aaaaacatgt gtggagttga taaaacttga
    75061 acaagaaaaa attcgaaaat ctaccgaaat ggaataattt tgcgctattt aattttttag
    75121 cgaaagataa ggaaaatagc ctggaagtca tggaggcggc gcgcggtttt gccgttccgg
    75181 gaatcgttgc aacgaactac gaaacagcag aagaagccgc aaatgtggtg aaagaattac
    75241 aaacaacagc ccccgtcatt agtgttggtc ttggtggcgg tggagactgg caaaactggc
    75301 gtgatgtgct tcatattgct cgtctggctc cgaacagtca tattaaccag ccaatcgaaa
    75361 ccgcgggatt aacaaatgac ttacttccgg aaacatacac taatgcactt gttcgtccaa
    75421 ccgggaaaat cggcatcgtc aaactatctt ccggagacga aattaccgct gaagaagctg
    75481 tcgattattg tctatccgcc aacatcccgt ccatcaaatt tatgagcatt gaaggcacga
    75541 aatatttaga tgaactagtt tacttaacaa aaattgcggc cgataaaggc atttacggta
    75601 ttgagccagc gggaggaatt ggagctgaca atattcttga aataacaacc gccatcaagt
    75661 ccaccggaat tcccttttat atgccgcata tttttggaaa aacaattgac aaagcaactg
    75721 gccgaacgaa accggaagaa atcgagaaaa tttttgcagc tttggagggg aattaaatga
    75781 ttaataacta tatcgatatt acagttcgtt tattagaaaa cattctcgat aatgaagctg
    75841 attatgtaaa agaagcagga gcgaaggtag ccgaatctat tgaaaacgac ggggtaatcc
    75901 atttatttgg ttgcggtcac tcgcatattt taacagagga agtattttac cgcgcaggtg
    75961 gactggctgc gattcatccg attttgcatg aaccacttat gcttcacgaa ggagctgcgg
    76021 cgtcatctgt actggaacga aaaaatgatt atgcgaaaac atttatggca gaggaagata
    76081 tccgtcctgg cgatatcatg attgtgctat cgacgtccgg acgaaaccct gtaccaattg
    76141 atgttgctga aattgcccgt gaaaaaggtg catttgtcat cgtcattact tcgctccaat
    76201 actccgctag ccaaaaatcc cgccacacat ccggaaaacg tttatctgat acaggggaca
    76261 ttgtaattga taacggtgct gtcaaaggtg atgccgtcct aaaatcggca aacttcgata
    76321 tcgcatttgc cccaacatcg acggtaacgg gcgcagtcat cttgcaatct atttttgcag
    76381 aagcaatcga aacaatggta aacgacaact tcacaccgcc agtatttatt agtggaaatg
    76441 tcgaaaatgc cgatgcacat aatcaagcac ttgttgataa atataatgag cgaattccgc
    76501 ttcttggaat gaatttataa gaaagaaaag tctaggttag cacctagact tttttactat
    76561 gttagagtat ttctatagat tgcgatataa ttaaactata taaaaatgat aaaggagtgc
    76621 ggccgatgga ttcagcatat gtttttgata gcgaacaagc aacgaaatta ttaatgaaga
    76681 actatgaatt agtaaaaacg agtggcgtta gttttattga taaacgaatt cgatttctaa
    76741 ttgctcgtct ttttgcgggg aataatgaag tggttaatcc agaggaattt agtgaaataa
    76801 ataaagaaat taaacgacaa ctaggcatgt tcactgcact aaacggaaat gttcgcgcat
    76861 ccttggtagg attgctcatg gcgaacgata atgccagccg agagagcgtc cagcaagtaa
    76921 ttgctaatta taatacattg atccaagcgg gattccagcg cacagaatac acttattttg
    76981 cagcatattt attactagaa tcagaaaatc ccaaaaagac agcccaaaaa gcgaaaacta
    77041 ttcaccaact tttcaaaaaa gaccatccat ttttaactaa aagtgaagat gtgacaacag
    77101 ctgttttctt agcaaatctt cctgaagaaa ataccacgaa attggctgaa ataacagagt
    77161 actattttca agagttcgcc gcgaaaggtt tccgcaaaaa tgatagctta caatttttag
    77221 caacaacagg gacacttttg tacggtgaaa aagatagcaa attcattcga agagtagata
    77281 atattgtaga agaactacga caaaaaggga taaaagtaaa accgctacat tactcaagta
    77341 ttgggatttt agcttttgtc atggacgcgc gaaaaatcga ttcagggtta gtgaacttaa
    77401 ttgatgaatt acagcaacaa ccaggcttgc gtttcggacg agaattcgtt acagctctag
    77461 caataagcct atatacggaa aaacaatcag gtcaaatgag taaggaacaa ttagaagggt
    77521 taatggtcaa tgtgcatata ttgattgcaa tggaacaagc agctgcggtg agtgcagctg
    77581 cagcagcgag tgcggcagcc gcatctagtt aatacaaaaa aactggtaag ccataacggc
    77641 taccagtttt tttatgattt aaggactaac ataatagtca ttacttttct taggcggatt
    77701 ggatgaactt aaaacgtaat ctttcaaaaa tgaattcggt gcagaatccc ataaagccat
    77761 accatcagat tttggagggg cagttccggc gaagaaatac atgttattta atcccatcgt
    77821 atctgccatt ttttccttat ccgcttggtt gtacttatca taagattcat cggtcattaa
    77881 atccatcatt gccttatcgt agccactatt ataaaaagtt tcgtaatcaa attgattaaa
    77941 attaagcaag ttttcatccg tagagccttg cgcttttgcc caagcttcca tatctaactt
    78001 ttgagattga tacgtgaagt ttttgttttt ggcactataa gtaatattgc catatttatg
    78061 cgggaaaaca gaaagagcat tggttacgat atcggtaatt tctttgccat ctgtgctttt
    78121 cgcagagcgg atattttgcg tatgaatatg gccacttaga gaaaaatcca tagagccttc
    78181 cgtaagcgca tcaattactt gttgattata attaatagta taaccttttt gaataacatc
    78241 attatgatca gttaaattat gatgcaaaac agggacaagt ttagcgccgt ttttctttgc
    78301 aagcgcactg ctttctttta tccaatctag tgttccagct gttagtccac cttctgttgt
    78361 cggagttcct tgctgcatat ttgttttata aatagccgtg tctaacatta acagccatac
    78421 tttggaagaa ggagctgcta aataactcag cgaaaactca tcacttgaaa tagcatcttt
    78481 atatccaaaa tcaccataaa ttttactgaa atcagttggt gatatagtgt cggttggtaa
    78541 ctgcttatct ttttcaaatt tgcgggccca agggttgtta atgtcatgat tacccggaac
    78601 aacaaaaacc tgcgtcccag ttttctctac ttgagtaagt tttttggcta actcttcatg
    78661 acttgttttt tcaccgttgt tcgtaaggtc gccactaata ataaggacgt ctgttttttt
    78721 agcctctaca tccgccaaaa aagcatcggt tatttcatcg ctataagcta actgtttccc
    78781 atcacccgca gccacatatt tttcaaaggc ttttccgttg tcggttagtg atggcgcaaa
    78841 gtaatgaaca tccgtcgtta cgaccatcga taaattacgg tctttctcaa ttggcgcagt
    78901 aatgttctct gtttttccac ttgcggaact acaagcaact aaagagatag ataggagtat
    78961 cggtgtaact attttaaaaa atcgaatcac gttaatcacg ctttcatgtt tgtattttca
    79021 caataagttc caaaatttag aacaaaactc aatatggaag gagcaatgtt ctaaacggtt
    79081 tagatatctc gatctaaaat atttttcgtc aagcggtaca tatcatcacg atacgcgcca
    79141 gctggtagtt ttttgatttc acgaagcgct ttattcgtat atttgttggc aagtttgaat
    79201 gcctgttcga cacctttata cttagaaata agtgctaaaa cttgttcgga agcttcatcc
    79261 gtcatatcta gtttttgaga aagaagtggc tcgaattcag ccaagtgacc tttcattgca
    79321 taaataagtg gcagagaata aataccttgt ttcatatcat ttaaaacggg tttgccaaga
    79381 ccttcatccg tacttgtgta atccagtacg tcgtcaataa tttggaaagc catgccaagg
    79441 taatgtccga tgttataaca ttttgcaact gtcatgcgtg ttgctttact gccagttgcg
    79501 ccagagtaac aactaagtgc aaataattgt gctgttttac cagaaatacg cgttaaatat
    79561 tcacgaacag ttacattcat tttgtagctt gtgcgcattt ggtctagttc gcccattaag
    79621 attttttcga tatttttact attaaattca atgttctcca cggaagaagc atgtgcggat
    79681 aaaattttga aacagatgca gaataaataa tcgcctgtat aaacagcata attacgacca
    79741 tatttagaat gaattgtcgg gatcccgcgg cgtaacggag aatcatcaac gacatcatca
    79801 tgaatcaacg tcgccatatg aagtacttca agcgcagcag caatcgaaac agcacgttct
    79861 ttatcataat caggaccagc ttgcgcagaa agaagcgcaa aagcagggcg cagtaatttc
    79921 ccaccagcgt gaatcaaatc tttcacgttt tgctcaacgt gtttatcgcg aatttgaata
    79981 tttttttcaa tcgtttgtaa gacttcttgt aaatctttgg aaagtgcagg atactcatcc
    80041 cacatagcat gaagttgcat attgaactcc tttttttaaa gttatttttg tgctgcttga
    80101 ctttgtttag catcagcgaa catccgcaaa gtttggacgt ttttcagtag gtaatttgct
    80161 gcaatcccaa ccgcgatccc agaaagaatg ccgatgaaag ataatactgg caaataaagc
    80221 ataacggacc aagtaccagc aatccaacta gcaattacga gctgaccaac gttatgtaaa
    80281 atcccaccag taacactaac gccaatgatg ctcacgcgtt tcggcccaag ttgttgtacg
    80341 agccacatcc caagaaaact taagatagct ccggccgcgc tatacataaa ggtcgaaatt
    80401 gtcccaccaa gcaaagtgga taaaactaac cgaatgcaga taatcataaa agtatctttt
    80461 gccgataatg tataaagcga aatacacgta ataatattag caagacctag tttcgcccca
    80521 ggagcaaacg caaatggaaa cggaatagcc cgctcgagta aactaatgac aaccgcttga
    80581 gcagccagaa gtgcaatata tactaatcgt ctgttttttg tcatagaaac actttcctat
    80641 ctattggagg ataaggtcag gaagagataa tcggatcatc tgaatcgcct gaactcccgt
    80701 cactcgcttt tacttcaatt actaacttat gtggaagaca aacaactgta tcgccttgtt
    80761 tatcaattgc tccagtccga acacatactt gatcgttaca gttcgcttta ctaattcgga
    80821 tttcttcccc cgaaacctca atcgtgttag tatgtccatc tggttgtttc acatcaaagc
    80881 tttccgtccc tttgtgccca gtgagcgtaa cagttttata ttctttacta tcaacagaaa
    80941 taactgcaac aagctctttt tttccgttag caggagccgg ttcattcgct tttacatatg
    81001 aaaaaatagc aatcggcaaa aaggagagta tacaaagaga taaaataata ataatatccc
    81061 aacgcttcac catagaaaga tacttcttca ccgtattgcc tcctttcaaa atgtcatgta
    81121 caaatcctat tttaaaggat aatgcctaaa tataatagga aaaagttcaa gaaatcaaca
    81181 aataataaaa acggaagcac ctcctatgcc aaaactggct tttggatgca ctcccgagtt
    81241 tttatttaaa attttaacta actaaattac ttgtctctgt aaacggatct tggcttaccg
    81301 taccaccaat gaccaagatg tttttggaac caaggaacag cccaataatc aagaccaaat
    81361 gtgcgtccag cgccatttag aagtgcgata gaagctggta acgcccagaa tttgtcccaa
    81421 ccaagcatag cgcttagtgt aaacattact aggaatccgg cacttccgat acttacaagc
    81481 caagtgaata gacctaccac catagcaaga ccgattgcaa gttcaacaaa aggtacaact
    81541 ttttgcatta ctagagcaac atcaaggttt ggcattagaa gttccataat ccactggaac
    81601 caaccaggca tatgactaag aattggagta gttacatttg ttgcagcagc cccagcagca
    81661 tcaccggcag cttgactagc accagatgta gcagcagttt gtaaccattc gaatggcatt
    81721 ttagaggtag ttgcagttaa ccaagaatca gaaccgatac cgttaaataa aggttttaaa
    81781 tttgtaatac ttactttatc ccatgtagtt tcaccgtaga ttttagaaag agcttcgtca
    81841 atccagaacc aaccaagata tacacgtaaa ggaagaaccc aaagtacgtt accataacga
    81901 gaagtccaac cacggaaaat gttgcggtga tctttaatgt ggaagaattc atgcataata
    81961 tattgccaca tgtaataacc actgcgaata ccgaagaagt aatacaagtt aaccatatgc
    82021 ttcattaaaa tagcgaacca accagataag tgcataccac caaggtgagc aacaccgtat
    82081 ttagctccga tagaaaccat tacaccatga tatttacctt ggaatggttc tttctcgcca
    82141 gtaccgctca tttccacgat aatgcttttc gctgcagtta atgcagtttg ttcagcacct
    82201 tcaacgattt gcggagttgg tttaccttct tcatcttcaa agtaagcaag gtcaccaacg
    82261 acataaacgt ctttaagacc ttctgcttcc atatattggt ttactttcaa acggcctgca
    82321 cgagcagatt ccataccgta atcttttgta tcagagttag cgcgaacacc agcagtccaa
    82381 attaatgtac ttgttggaag ctcttcgcca gatttaagta cgatgctttc aggtttaact
    82441 tcaacgatag cagcgttttt catgatttca ataccttttt taaccatgta acgttcagct
    82501 ttgtcagcgt ctcttctttc aagcatgttt aggattgttg gagcagcttc tactacaact
    82561 agtttaattt cagatgcgtc aattttgtta tctttagcaa gacgatcttt ccattctaaa
    82621 agttccccaa ccatttcgat accagtaaat ccagatccac aaacaacgaa tgttaacatt
    82681 gctttacgtt tttcaacgtc ttgttcgcga gatgctttcg ttacagtttc ttcaatatga
    82741 ttgcgtaact taacagaatc ttcccaagac caaagtgtaa agccattttc gccaacacca
    82801 ggagttccga aatcattagg ttctccgccc ataccaagta ctaggtaatc aaacggataa
    82861 ctaccgtgct ctgttgttac aactttttta tcatgatcta catgtgtcac gttatcagtt
    82921 acaagattaa cttttgttct attaaacaaa cgacgtaaat catattgaat tgcagttggt
    82981 tcaacacgac caccagcaac ctcatgtagt tcagtcatca ttgtatggta cgaatgacga
    83041 tcgattaatg taatattaac gtctttgtct ttcttgtatt tcttagctaa tttcttagca
    83101 gcgtgtacac ctgcatatcc tgccccaatt aaaacgatat tcttttcagg catatgcttc
    83161 ctcaactcct tgtaagttta ttcacaaaaa taaaatgagt ccaaaattcc ccacagtatt
    83221 attataacct atcatagttt aacagaaacc tcctactaat gtctagatag taaagaacaa
    83281 ttctaatcta aatttgaaaa ataggacttt gtgcaaatgt tacataatta agcaggctaa
    83341 aagtccttgt ttaacatagg atgttagaca tttttgtttg ctattttgct agaaaaggtt
    83401 ggctttaact gttatatata taccaatagt cattattttg aaaattagat gaattatgtc
    83461 tttagaatta cagtagacaa aaccgggcgc tgatggtatc atttgtattg taaaagtgat
    83521 atcgctttcg cagactatcg gtttgtgttc acgaaatcac aaacaaagtt aatcaataaa
    83581 acaaaaggtg ggagcaaaac atgaaattga aaaaagtagc aatgggtatt accgtggtaa
    83641 tggcttcaag tttattacta gtaggttgcg gtagcagtga cgacagcagc aaagacaaaa
    83701 agagcacaga cacaaaacaa acagaaacaa agaaaacagc taaaactgat ggtactatga
    83761 ctgatggtac ttacaaatta gaagaaaaga atttcgacga caaaggctgg aaaggtttca
    83821 tgtcaatcga agttaaagat ggtaaaatta caaaagctaa ctacgattac aaaaacaaag
    83881 atggcaaatt aaaatctgaa gatgcagact acgaaaaagc aatgaaagat aaagtaggaa
    83941 ctggtcctca agaatacttg aaacaattaa gcgattcttt agttaaaaat caatctgcag
    84001 catctgtaga agtagtttca ggagcaactc attcttctga cgctttcatc aactatgcta
    84061 accaattaat ccaagcagct caaaaagctg atacaactac aatttccatc aacaacttag
    84121 ctaaaatgga agatggaact tataaacttg aagaacaaaa ttacgcacat ggttaccgtg
    84181 tagtattcag catggatgtt aaagatggca aaatcactaa atctgactac aactatgttg
    84241 acaaagacgg caaacttaaa tcagacgatg ctgactacga gaaaaacatg aaagctaaat
    84301 ctggtactgg tccaaaagaa tacatcccag cacttaacaa atctcttgtt gaaaaacaag
    84361 acgttgctgc agtagacact gtttctggtg ctactaactc ttctaaccaa ttcaaaatct
    84421 acgcagctca acttcaaaat gctgcacaaa atggtaacac tgacacaatt aaagtgtaca
    84481 acctagtaga agctgaataa ttagcgaaat ttatgtacaa aacggctggt cctaatttct
    84541 agggctagcc gattttttta tcgaaaaaca gaggaattaa gcctttttac tgtagattta
    84601 ttcctttttt tacgctatag ttattcaagt aaagatcacg gatttagaaa ggtgaaaaag
    84661 ctaatgaaga aatggaaaat aataatttca gttatcatat tggcgcttgt tgtatcagcg
    84721 tgtggaaatt ctagtaaaga aacaaagagt gaaccaagtg attcaaaaaa actaatggat
    84781 caaccatact ccaaaacaga ctttctaatg ggcacagtag taacgcttaa aatttatgat
    84841 aaaggcaaag aagacgtgct tgataaaggc ttcgatcgaa tcaaagatct agctgccaag
    84901 attaccacaa gtgattcgga aaaaacgtct gaagtggata aaatcaacga acaagccggc
    84961 aaaaaaccag tgaaagtatc taaagatgta tactacttaa ttcaagaagg gcttaaatac
    85021 tccgagaact ctggtggtag cttcgatatt actattgggc cgttaacatc tctatggcac
    85081 atcggttttt ctgatgcgcg caaaccttct caagcagaaa ttgacgcggt gttaccatta
    85141 attaattaca aagacgttaa aatgaatgat aaagaccaaa cagtatactt ggaaaaagaa
    85201 ggtatggaac tagatttagg ggcaattgct aaaggcttca ttactgacga gactttaaag
    85261 gtattcaaag aaaataaagt aacaacctct atcatagatt taggtggaaa catttatgtt
    85321 caaggcaaca acccgaatgg caacaaatgg aatgtcggaa ttcaagatcc gttttctccg
    85381 cgtggaagtg ttattgggaa acttcctgaa tctaatatgt ctatcgtaac ttctggtatt
    85441 tatgaacgtt accttgaagt ggatggtaaa acatatcatc acatcttaga cccgaaaaca
    85501 ggatatccgt ttgacaatga tatcgctgga gtttcgattg tatctaaaaa atcaattgat
    85561 ggcgacggtc tatccaccgc tactttctcc aaaggggtta aaggtggcat ggactacatt
    85621 gaacaatttg aaggtgtaga tgctattttc atcagtaaag agaaaaaagt atacgaaact
    85681 tctggcttaa aaggtcaatt cgaattaacg gataaagact tccagatgga cacgctaaaa
    85741 aaataaacta ttattataga agaaagtgag cagaattcgc tctggattct gctcacaata
    85801 aactagaaaa ggggctaaaa aggggatatg tcaataccat cgtttctgaa gttggttgaa
    85861 atccaaacga agatagctag tgtttttccg tttatgttag gaacgctatt tgttgtgtat
    85921 caatatgata tgttcaaacc tgttaatacg ttgatatttt tcggatctat gctcatattc
    85981 gacttgacta caacagcgat taataactat atggattacc gcaaagcaac agacaatcat
    86041 gattacgatt atcgaactac cagcaatgta attgggcaag agcaaattcc ggtgcgaaca
    86101 gttattataa ctattttctt gatgttcttc attgctacag gattaggtgt ttggttagtt
    86161 tttcgaacag atcttttagt gctcttaatt ggatttgtct gcttttgtat aggcatctta
    86221 tatacattcg gtcctgtacc gctttctcgt atgccgttag gtgaaatttt ttcaggcgta
    86281 acgatggggt ttgggatttt cttcttagct gtatatgtaa atgcatacga cgcgggaata
    86341 gcgaatttac tttggcaagg agaaacggtg acaatccagt tcaatctaat agaaattatt
    86401 cggataggtg tggtatcctt accttgtatt ttcacaatag ctaatatcat gctcgcgaat
    86461 aatctctgtg atttagatga agatattcgg aatcatcgtt acacacttcc gtattatata
    86521 ggaagaaaaa tgggagtctt attatttaat gctttatatt atgcttcatt tttagctgtg
    86581 gttgtttcgg tagctataaa cttcttacat ccaatcatgt tactatcact aataacaatc
    86641 tatccagtgt atcgtaatct agttaaattc aataaagaac aagtaaaatc aaaaacattt
    86701 gttattggta ttcgtaattt cgtattaatt aatgcgacat tgacaatttt aatggcggtg
    86761 agcgtggtac ttcaacaact ggcgtaaaga aaagggggct tctttgaatg attgaaaaac
    86821 taatattagg tcgttttgtc ccaggggagt ccttaattca tggtctggat gcgcgaacga
    86881 aacttttagc aggcttttat tatatcggca ttttattttt agcgaataac tggtggacat
    86941 acgccttaat ggttttgttc acactcatgg tcattcaaat gacaggtatc aagttaaaag
    87001 tgtttataaa aggtgtaaaa ccacttattt ggctaatttt atttacagta gtaatgcaaa
    87061 tactatttgc gagtggcgga acgatttatt ttgattgggg tccatttaca atctcttcat
    87121 ttgggctttt gaacggggta tttgtgtttt tgcgctttgt cttaattatc atgatgtcga
    87181 ccgttatcac gctcacaacg acgcctatga acctgacaga cgcaattgct tacatccttc
    87241 gtccgtttgc tgtactcaaa gtgccggtga atgacattgc attaatgatt tcggtggcac
    87301 ttcgctttat tccaaccctt atgggagaaa cagataaaat tatgaaagcg cagcgagctc
    87361 gcggagtgga ttttggtgaa ggtaatcttt tcgaacaaat gaaagttgtt gtcccgattt
    87421 ttattccgtt atttgttagt tcgtttaacc gagcggaaga attagcggat gcaatggaag
    87481 cgagagggta tcaaggaggc gaagggcgca cgagattccg aatattgcat tggcattttg
    87541 gagatttgat tgcggcatgt gtaatgatac ttttaaccgc gggactcgta atactaagaa
    87601 catcttaaaa acattcgata ttaacggatg tttttttctt ttggataaaa tgagcagaat
    87661 ggctctgtca gacagtttga agataaacca aaaccgagaa tcttctatat aatagttcct
    87721 atgaaaataa cttaaaactt ttttcaaaaa gcggttgatt actatcccta acccgtgtat
    87781 aatagataaa gtgcaaatgg acaggcattg gtctgccctt ttgacaacga gcaccccggt
    87841 attgccggga atgcccatgt gatgaagtga aaggttgctg acacacccgg ccgctttgcc
    87901 atggcggatg ttcaggtaat tttcacggag aatgtctact ttaaaagtag gcgaaaagga
    87961 gggaaagtaa tggcaaaaca aaaaattcgt attcgtttaa aagcttatga tcaccgtatt
    88021 ttggatcaat cagcagaaaa gattgtagaa acagcgaaac gctcaggtgc ttctgtatct
    88081 ggtccgatcc cacttccaac agagaagtca atctacacag tcttgcgtgc ggtccacaaa
    88141 tataaagact ctcgtgagca attcgaaatg cgtacacaca aacgtttaat cgacatcgtt
    88201 aatccaacac cacaaacagt tgatagcttg atgcgtttag acttgccaag cggtgtggac
    88261 atcgaaatca aactataata agaatatatt aaattaacag gaggtgtgac tcatgaccaa
    88321 aggaatctta ggtagaaaag tagggatgac acaagttttc actgaaaacg gcgaacttat
    88381 tccagtaaca gtaatcgaag cagcacaaaa cgtggtactt caaaagaaaa ctgttgaaac
    88441 tgacggctat gaagctgtac aaatcggttt cgaagataag agagcaattt tgtcaaacaa
    88501 acccgaacaa ggtcatgtag caaaagccaa tactactcct aagcgcttca ttcgcgaatt
    88561 ccgcgatgta aacttagacg agtatgagat tggtgcagaa gtaaaagtag acgtattcgc
    88621 agaaggtgac atcatcgacg cgacaggcgt atcgaaaggt aaaggattcc aaggtgttat
    88681 taaacgccac ggacaatcac gcggccctat ggcccacggt tcccgttacc atcgtcgccc
    88741 aggttcaatg ggtccagtag cacctaaccg tgttttcaaa aataaactac ttccaggtcg
    88801 tatgggtgga gaacaaatca ctatccaaaa cctagaaatc gttaaagtag acgttgaaaa
    88861 gaacgttctt ttagtaaaag gtaacgttcc aggcgctaaa aaagcattag ttcaaattaa
    88921 aactgctact aaagcaaaat aattcatttg gaaaggagga ctaacgaatg ccaaaattaa
    88981 gcttacttaa acaagatgga acaaacgctg gcgaaattac tttaaacgac actgttttcg
    89041 gtatcgaacc aaatgaaaaa gttgttgttg atgtgatttt gagccaacgt gcatccctac
    89101 gtcaagggac tcacaaagta aaaaatcgtt cagaagtacg tggtggcgga cgtaaaccat
    89161 ggcgtcaaaa aggtacaggt cgtgcccgtc aaggttcaat ccgttccccg caatggcgtg
    89221 gcggtggtgt cgtattcggc ccaacacctc gttcatatgc atacaaatta cctaagaaag
    89281 ttcgtcgttt agcgattaaa tcaattcttt cttctaaagt aaatgaagaa aaattagttg
    89341 tacttgaagg tttgactttc gatgcaccta aaacaaaaga atttgcggct tttcttaaaa
    89401 atatctctgt agatactaag gcactaatcg tagttgccgg tgaaagtgaa aatgtagaat
    89461 tatctgcacg caacttacaa ggcattacag ttattccagc tgaaagtatc tcagtactag
    89521 aagttgctaa acatgataaa ttaattatca ctaaagcagc tgtcgaaaaa gtagaggagg
    89581 tgctcgcata atggatgcac gcgacatcat taagcgccca gttgtaactg aagaatctac
    89641 aagtattctc gacgataaga aatatacatt tgaagtagat actcgcgcaa ctaaaacgca
    89701 agtaaaatac gcagttgaag aaattttcga cgtaaaagtt gctaaagtaa acgtaatgaa
    89761 ttacaaaggc aaacttaaac gtatgggccg ttatgcaggt tacactaaca aacgccgtaa
    89821 agcgattgtt actgttacag ctgacagcaa agaaattcaa ttctttgaag tataattcga
    89881 ctaactttaa ataaatctaa cgaggagggg aaacaatggc gatcaaaaag tataaaccta
    89941 ccactaacgg gcgccggcac atgactagtt ctgatttcgc tgagattact acaagtactc
    90001 cagaaaaatc tttactacgt cctcttaaaa agaaagccgg acgcaataac caaggtaagt
    90061 taactgttcg tcatcacggc ggtggccata aacgccaata ccgcgtgatt gatttcaaac
    90121 gtaacaaaga tggtattcct ggacgcgttg caacgatcga gtacgatcca aaccgttctg
    90181 ctaatattgc tctaatcaac tatgctgatg gagaaaaacg ctacatcatc gcagcaaaag
    90241 gccttgaagt aggtcaaaca atttattcag gagcagaagc tgatatcaaa gtcggtaatg
    90301 cactagaatt aaaagatatt ccagtgggta ctgttatcca caatatcgaa atgaaacctg
    90361 gtaaaggtgg acaattagta cgttctgctg gaacaagtgc tcaagtgctt ggtaaagaag
    90421 gtaaatacgt attaatccgc ttaaactctg gtgaagttcg catgattctt gctacttgcc
    90481 gtgctacaat cggtcaagtt ggtaacgaac aacacgaact tatcaacatc ggtaaagcag
    90541 gtcgttcacg ttggatgggt aaacgcccaa ctgttcgtgg atctgtaatg aacccgaacg
    90601 atcacccaca cggtggtggt gaaggtaaag ctccaatcgg ccgtaaatcg ccaatgtctc
    90661 catggggtaa accaactctt ggatacaaaa cacgtaagaa aaacaacaac tccgataaat
    90721 ttatcgtacg tcgtcgtaag aaaaaataat cggatcaata gattgaataa aattggtagc
    90781 aggatagcga ggacatgcgt tctcagcttc ctgactatgc gaagggaggt tccgtcatgg
    90841 gtcgtagttt gaaaaaagga ccttttgttg atgaccactt gatgaagaaa gtggaagcag
    90901 cagcagaaag cgaaaagaaa caagtaatta aaacttggtc tcgtcgctcc acgattttcc
    90961 caacttttgt tggacaaaca atcgcagtat atgatggacg taaacacgtt cctgtttatg
    91021 ttcaagaaga tatggtagga cacaaactgg gcgaattcgc accaactcgt acgtaccgcg
    91081 gtcatgcggg cgacgataaa aaaactaaac gctaatttga gaggaggata tcctaatggc
    91141 aagtgaagtt acaagcgcaa aagccgttgc caaaacggtt cgtattgctc ctcgcaaagc
    91201 tagaatcgtc attgatttaa ttcgaggcaa gcaagttggc gaagcaattg caatcttgaa
    91261 gtatactcca agatcagctt ccccaattat tgaaaaagta ttaaaatctg ctattgctaa
    91321 cgcagagcat aactatgatt tagacattaa caaccttgta gtagaggaag catttgttga
    91381 cgaaggtcca acacttaaac gtttccgtcc acgtgcacaa ggtcgtgcaa gtgcaatcaa
    91441 caaacgtact agccacatca cagttgtggt atctgaagtg aaggagggat aattcgtggg
    91501 tcaaaaagta catccaatag gtatgcgtat cggtgtcatc cgtgattggg actccaaatg
    91561 gtacgcggaa aaagattatg cggacttctt acatgaagat ttacgcatcc gtgattacgt
    91621 tgcaaaacgt ctatctgacg cttctgtttc tcgtgtagaa atcgaacgtg cagctaaccg
    91681 tgtgaatatc actattcata ctgcaaaacc tggtatggtt atcggtaaag gtggttctga
    91741 agttgaagca ttacgcaaaa acttgaacga acttactcaa aaacgtgttc atatcaatat
    91801 cgtagaaatc aaacgtgctg acctagacgc aaaattggtt gctgaaaata tcgctcgtca
    91861 attggaaggt cgtgtatctt tccgtcgtgc gcaaaaacaa gctatccaac gtactatgcg
    91921 tgctggagca aaaggtatca aaactcaagt atctggtcgt cttggcggag cggatatcgc
    91981 tcgtgctgaa cactatagcg aaggaacagt acctcttcat acattgcgtg ccgacatcga
    92041 ctacgcatgg gaagaagctg acacaactta tggtaaacta ggcgttaaag tctggatcta
    92101 ccgcggtgaa gtccttccta cgaagaaaaa caatgtggaa ggaggaaaat aataatgtta
    92161 gttcctaaac gtgtaaaata ccgtcgtgaa ttccgcggaa acatgcgtgg acgcgcgaaa
    92221 ggcggaactg aagttgcatt tggtgaatac ggtcttcaag cagttgaagc ttcttggatt
    92281 acaaaccgtc aaatcgaagc agctcgtatc gcaatgactc gttacatgaa acgtggcggt
    92341 aaagtttgga ttaaaatttt ccctcataaa tcttacactt ctaaaccaat cggggttcgg
    92401 atgggtaaag gtaaaggtgc tccggaaggt tgggtaagcc cagtcaaacg tggcaaaatt
    92461 atgtttgaaa tcgcaggtgt tcctgaagat gtagcgcgtg aagcattacg tctagcagca
    92521 cacaaactgc cggtcaaaac taagatcgtt aaacgtgaag aaattggtgg tgaagcaaat
    92581 gaaagctaat gatatccgtg atttatccac taccgaaatc caagatcaag aaaaagcttt
    92641 gaaagaagag ctcttcaacc tgcgctttca attagctact ggtcaattag aaaacaccgc
    92701 acgtattcgt gaggttcgta aagcaattgc ccgtatgaaa acaatcgttc gagaaagaga
    92761 acttgcttaa aaaagaatcg taaggaggtt ttaatacatg gctgaccgta accaacgtaa
    92821 agtttatact ggtcgtgttg tatccgacaa aatggataaa acaattaccg tggttgttga
    92881 aacgtacaag aaacatggtt tgtacggtaa acgcgtgaag tattctaaaa aattcaaagc
    92941 gcatgatgaa aataacattg caaaaactgg cgatgtagtt cgtatttccg aaactcgtcc
    93001 attgtctgca actaaacatt tccgtttact agaagttgta gaagaagcag taattatcta
    93061 aatcaaaagt taaaaataga ttgtgaaaag ttgccgagtg caatttttcc gacccgttat
    93121 tctggaagga gggtgtccta atgattcaac aagaaagtcg tatgaaagtg gctgataact
    93181 ctggtgctcg tgaagtgtta actattaaag tactaggtgg atcaggacgc aaaactgcta
    93241 acattggcga tgttgtcgtg tgtaccgtta aacaagcaac accaggcggc gttgtcaaaa
    93301 aaggtgaagt tgttaaagca gtaatcgttc gtactaagag tggagcacgt cgtcaagacg
    93361 gttcttacat caagtttgat gaaaatgcat gtgtcattat ccgtgacgat aaaagtcctc
    93421 gtggaacacg tatttttgga cctgttgctc gcgaacttcg tgaaaacaac tttatgaaga
    93481 tcgtttcttt agctccagaa gttctttaaa aaataagttc caagaaatca aggaggtgct
    93541 ataccaatgc atgtcaaaaa aggtgataaa gtaaaagtta ttactggtaa agataaaggc
    93601 aaatccggca aagtgctcgc agcatttccg aaaaaggacc gcgtacttat cgaaggaatc
    93661 aatatggtta aaaaacatac aaaaccttcc aacatcaacc cgcaaggcgg aatcttgaat
    93721 gttgaagcac caatccacgt ttcaaacgta atgctaattg accctaaaac aggcgaacct
    93781 actcgtgtag gatacgaagt taaaggcgat aaaaaagtac gcgtagcaaa aaaatccggt
    93841 gaagtaatag ataaataata gtcgtaggaa ggagggaata ttacatgaat cgccttaaag
    93901 atcaatatct taaggaaatt gttcctgctt taatgagcaa attcaattat gactccgtaa
    93961 tggaggttcc aaaaatagat aaaatcgtaa tcaacactgg tgttggtgac gctacagcaa
    94021 atgcgaaagt tttagacagt gcagttgagg agttagctct tatcactggt caaaaacctg
    94081 taatcacaaa agcaaaaaat tctatcgctg gtttccgtct tcgtgaagga atgccaatcg
    94141 gtgctaaagt aactttgcgt ggtgaacgca tgtatgattt cttagataaa ttagttactg
    94201 tttcacttcc acgtgttcgt gatttccgtg gcgtatcgaa aaaagctttc gatggtcgtg
    94261 gtaactatac gttgggtgtt agagagcaac ttattttccc tgaaattgat tacgatcaag
    94321 tatcaaaagt acgcggtatg gacgtagtaa tcgttacaac tgccaaaagt gatgaagaat
    94381 ctcatgagtt actaactcaa ctagggatgc catttcaaaa gtaatcaaaa ctaattttag
    94441 tagggaggcg aaaacgtggc taagaaatcc atgatcgcga agcaaaaacg tacaccaaaa
    94501 tacgctgttc aagcatatac tcgttgtgaa cgttgtggtc gtccacattc cgttattcgc
    94561 aaatttaaat tatgccgtat ttgtttccgt gaacttgcct ataaaggtca aattcccggc
    94621 gtgaaaaaag caagctggta agaaagagtt taaggaagga gggtattata catggtgatg
    94681 acagatccaa ttgcagattt tctaactcgc attcgtaatg caaacatggt taaacatgat
    94741 aaattagaac tgcctgcatc caaaatcaaa aaagaaattg ctgaaatatt gaagcgtgaa
    94801 ggttttatcc gtgacgttga atatattgaa gatgacaatg ctggaacaat ccgtgttttc
    94861 ttaaaatatg gagcgactgg cgaacgtgta atcactggtt tgaaacgtat tagtaagcca
    94921 ggtttacgtg tatatgcaaa atcaactgag gtgcctaaag tacttaacgg tctaggtatc
    94981 gcaatcgtgt ctacttccca aggcgtttta accgacaaag aagcccgtgc taaacaagtc
    95041 ggcggagaag tactagcata cgtttggtaa gaaaaagtaa accataagga ggtgcaataa
    95101 atgtcccgta taggtaaaaa aactattgtg attcctgcag gtgtaacagt tacacttaat
    95161 ggatcaacag caacagttaa aggtcctaaa ggtgaacttg taaaagagtt caacccagaa
    95221 attactatta atattgaagg caacgaaatt aacgtttctc gcccgactga taataaaaac
    95281 caccgtgcac ttcatggtac aactcgtgct attcttaata acatggttgt cggagtttcc
    95341 gagggttatg aaaagaaatt agaacttatc ggtgttggtt accgtgcgca aaaacaaggc
    95401 gacaagcttg ttcttaacgt agggtactct catccagtag agtttgttgc tcctaaaggc
    95461 gtagatattg aagttcctgc aaacacacaa gtgattgtta aaggatacaa caaagaacac
    95521 gttggcgagt tagctgcaaa cattcgtgcc gtacgtccac cagagccata taaaggtaaa
    95581 ggtattcgtt acgaaggcga acatgtacgc cgtaaagaag gtaaaactgg taaataatgc
    95641 cgcttaatta ggcaaatgag agaagaggtg agtcgtgtga ttaccaaaat cgacaaaaat
    95701 aaagtacgta aaaaaagaca tgctcgtgtt cgttctaaga tttctggaac tgaaagtcgt
    95761 ccacgtttaa acgtattccg ttcaaacaaa aacatttatg ctcaaattat tgatgatgta
    95821 aatggtgtga cacttgcaag tgcgtctaat ttagataaag atttcggttc tgctgaatcc
    95881 aaagttgatg cagcaagcaa agttggcgaa ctagttgcta aacgtgcttc cgaaaaaggt
    95941 attacttctg tcacttttga ccgtggagga tacttatatc atggccgcgt gaaagctctt
    96001 gctgaagcag ctcgcgaaaa tggactagaa ttttaataag aaggagggac atattacatg
    96061 cctgagcaaa ttgatggaaa caaattagat ttagaagaac gcgttgttac aatcaaccgt
    96121 gttgctaaag tagttaaagg tggacgtcgt ttccgtttca cagcacttgt tgttgttgga
    96181 gacaaaaatg gtcatgttgg tttcggtact ggtaaagcgc aagaagttcc agatgctatc
    96241 cgtaaagctg ttgaggatgc taaaaagaac atggtgcttg taccaactgt agacacaact
    96301 attccacaca ctgtagtcgg acattttggt ggcggggaaa ttcttcttaa accagctagt
    96361 gccggttctg gtgtaactgc tggtggtccc gttcgtgcgg tcctagaact tgccggtgtt
    96421 gctgatgtat cttccaaatc gcttggatct aatacaccaa ttaacatggt acgtgctaca
    96481 atcgacggaa ttaaacaact gaaaaacgct gaagatgttg cgaaacttcg tggcaaaaca
    96541 gtagaagaat tgttaggata aggagggaat tatcattatg gcgaagttag aaattactct
    96601 aaaacgtagc ttaatcggac gccctcaacc acaacgcaaa actgttcaag cattaggtct
    96661 tggtaaaaca aattctgtag tggttaaaga agataatcct gcaattcgtg ggatgatcac
    96721 taaagtaagt catttagtgg acgtcaaaga agtttaagct taaaattatt atgcaatgga
    96781 tagaatttgt taaataggag gaggtgcttg acatgaaact acatgaactt aagccttcag
    96841 aaggttctcg taaagaacgt aatcgtgttg gtcgtggaac aggctctggt aacggcaaaa
    96901 cttcaggacg cggtcataaa ggacaaaaag ctcgttctgg tggtggcgta cgtttaggct
    96961 ttgaaggtgg acaacttcca cttttccgtc gtattccaaa acgtggattc acaaatatca
    97021 accgtaaaga atttgctatc gtgaacttag atgttttaaa ccgctttgaa gatggtacag
    97081 aagtaacacc agaactttta gttgaaactg gaattattcg taatgaaaaa tccggaatca
    97141 agattttatc taatggaaat atcgagaaaa aacttactgt gaaagcgaac aaattctctg
    97201 cagctgcgaa agaagcaatt gaagcggctg gcggaaaaac tgaggtgatc taatgtttca
    97261 aacgttagtt aacttcttca aagtagcaga catccgtaaa aaaatactat ttacattagc
    97321 aatgctagtt attttccgta ttggtacatt cgtgccagta ccgggagtta acgcagcagc
    97381 tttacaatct agtatggatg gcggtatttt ggggttctta aatacattta atggtggggc
    97441 tttaaaaaac ttctcaattt ttgccatggg tgtaatgcct tacattacat cttccattat
    97501 tgttcagtta cttcaaatgg acgttgttcc taaattgact gagtggtcga agcaagggga
    97561 aatgggtcgt aaaaaactca atcaacttac tagatacatg acaattggac ttggtttagt
    97621 ggaagctttc ggtatggcat atggatttaa ccgcatgtct tcagctggct tagtaattga
    97681 accttccatt ggtagatatg caattatcgc tattgtattg actactggta caatgttctt
    97741 aatgtggcta ggtgaacaaa tcactgttaa aggcgttggt aatggtgttt ccatcattat
    97801 ctttgcaggt atcgttgctc gtattcctga tggagttcgt caattatatg tttcgcaaat
    97861 tgaaaacgct ggtgatcaac ttttcctaca tgttctgaca ttagttggtg tagggattgc
    97921 aattttagct attgttgtag ctgtaatctt cttccaacaa gcactacgca aaattccaat
    97981 tcaatactct aaacgtgtag caggagcaaa acaatcgggc gcgcaagcaa cgcacttgcc
    98041 gttaaaactt aactctgccg gagttatccc tgttatcttt gcaagtgcat ttattattac
    98101 accacaaact atccttactt tctttgatca aagtaacgat gttgtaaaag tattgaaaga
    98161 tgtgtttgat tacacaaaac caattggtat gattttatat gttgcactaa ttgttgcttt
    98221 cacttatttc tatgctttca ttcaagtgaa ccctgagaaa gttgcagaca acttgaaaaa
    98281 gcaaggtggg tatattccta gtaaacgtcc tggtcgggaa acacaagctt atcttacatc
    98341 ggtactttac cgtctaacat ttgttggtgc aattttcctt tcagcggttg ctatacttcc
    98401 aactatcggt actactgtgt ttagtttacc gcagtcactt gccgttggtg gtacaagcct
    98461 actaattgtt atcggggtag cattagatac tacgaaacaa ctcgaaggac aacttgtaaa
    98521 aaggaactat cggggattta tcaaataaca cgcagttctt gttaggtctt cctagcagga
    98581 gctagcgcgt aataaggggc gaaacagttg aaattagtat taatgggact gcccggcgcc
    98641 ggaaaaggca cacaagcgga acagattgtt gagaaataca acattcctca tatttccact
    98701 ggagatatgt tccgagcagc tatgaaaaat aatacggaat taggaaagaa agctaaatcc
    98761 tttatggata atggcgacct tgttcctgat gaagtaacaa atggtatcgt tcgtgaacgt
    98821 ttggccgaag atgatgctaa gaatggtttc ttgcttgatg gttttccgcg cactgtggaa
    98881 caagcagaag agctagaaaa tattctaaat gatttaggga cagaacttga tgctgtcatt
    98941 aacattgaag ttgataaaga tgttttaatg aaacgtctta caggtcgttg gatttgtcgg
    99001 acttgcggta agacttacca tgaaatttac aacccaccga aagttcctgg gaaatgtgat
    99061 ttagatggcg gagaacttta ccaacgcgat gacgacaaga aagaaacggt tgaaaaacga
    99121 ctaaatgtaa atatgaaaca gaccaagccg cttctagatt tttattctga aaagggtaaa
    99181 cttcataaca taaacggcga gcaagacatt aaagacgttt ttgtagatgt ggaaaaaatt
    99241 cttgcttctt tttgaggagt gagctgtgct gaatcactgt caaaatcaat gcgtgcaaat
    99301 tagtttagtt tgtagtataa tggataattg gcagtggaat taaaggcatc taagcaaatc
    99361 atgatgaacg agagaaccgt ttgaagatca tccgaatgac gtatatgttc taccttgatc
    99421 tgttcagccg caatactttt gcgagtgaca gttcttctgg tttttacgga tttcactttt
    99481 acaggttgtc tgaaaagctg gcgaaatgtg ttgcctttta atgaagtgca tccatttttg
    99541 catgttttac gtttttttca tgtaagagaa atagttacac tgaaaggatt aggcctgcat
    99601 caggaacaaa tccaagaata caagaaggag gtagcaaaca tatggcaaag gaagatgtta
    99661 ttgaagtaga aggcgtagta caagaaactc taccaaacgc gatgttcaac gttgaactcg
    99721 aaaatggtca taaagtactg gcaactgttt ctggtaaaat ccgtatgcat tacattcgta
    99781 ttttacctgg agataaagtg acagtagagc tttctccata cgacctgaca cgcggaagaa
    99841 ttacttatcg ttttaaataa tttgcactcc gaaattgaat ttatataccg gtctggttta
    99901 tccagcttag aaattatcgg tttatagaga cattttctct aataaacaag gaggtatatc
    99961 tatatgaaag taagaccatc agtgaaacct atgtgcgaaa aatgtaaagt tattcgtcgt
   100021 aaaggtaaag taatggtaat ttgtgaaaat ccaaaacata aacaaaaaca aggataagag
   100081 gaggtgctta agtaaatggc acgtattgca ggtgtggacg ttccacgtga aaaacgtatt
   100141 gttatttccc tgacttacat ttatggtatc ggtaaacaaa cagctaaaga agttcttgct
   100201 gaagctggcg tttctgaaga tactcgtact cgtgatttaa ctgaagaaga gctaggtaaa
   100261 atccgtgaaa tcttagaccg tattaaagtt gaaggtgacc ttcgtcgtga agtaaactta
   100321 aacattaaac gtctaatcga aatcggttct taccgtggca tgcgtcaccg tcgtggactt
   100381 ccagttcgcg gacaaaatac aaaaaataat gcccgtactc gtaaaggccc gtccaaaaca
   100441 gtagcaggca aaaagaaata atagtaaagg aggtagttag tgaatggctc gtaaaacaaa
   100501 tactcgtaaa cgccgtgtga aaaagaatat cgaatctggt attgcacaca tccgttctac
   100561 atttaataat acgatcgtaa tgattactga cacacatggt aatgctttag cttggtcaag
   100621 tgcaggttcc ctaggattta aaggttctcg taaatctact cctttcgcag cgcaaatggc
   100681 agctgaaagt gcagcaaaat cagcacaaga acatggttta aaaacattag aagtaactgt
   100741 taaaggtcct ggttcaggtc gtgaagcggc tatccgtgca ctacaagcag ctggtcttga
   100801 agtaacagct attaaagatg taactccagt tccacataac ggatgtcgtc ctccaaaacg
   100861 tcgtcgcgta taagtggtcg ttttcttttg ccaatagtag atttttactg tcttaactat
   100921 caaggcagag agtttgacat aaagactgat attctagacg ttttgaagga gggtaaattt
   100981 gaatgatcga aattgaaaag ccaaaaatcg agacgattga gatcagcgat gatgccaagt
   101041 atggaaagtt tgttgtagag ccacttgagc gtggatatgg tacaactttg ggtaactcct
   101101 tacgtcgtat tctattatct tctcttccag gtgcagcagt aacctctatc caaattgatg
   101161 gagctttaca tgagttttct gtaattgaag gtgtagtaga agatgtaaca accatgattt
   101221 taaatattaa aaaacttgca ctaaaaatct attctgatga agaaaaaaca ttagaaatcg
   101281 atatgcaagg tcctggtgta gtaactgcag ctgacattaa ttatgacagc gacgttgaga
   101341 ttttaaatcc cgacttacac attgctacat taagtgataa tgctaaattt catgtgcgtt
   101401 taaatgcgac tcgtggtcgt ggttacacac ctgctgatca aaataaacgc gaaaatatgc
   101461 caattggtgt acttccagtc gattcaatct tttcaccggt tatccgtgtg aactatcaag
   101521 tggaaaatac acgtgttgga caatcaacta attatgataa gcttacgttt gatgtgttaa
   101581 ctgacggaag tatcagccca gaagaagcag tttcacttgg agctaaaatt ctttctgagc
   101641 acttaagtat cttcgttaac ttaacagatg aagcacaaaa agctgaaatt atgattgaaa
   101701 aagaagaaag ccataaagag aaagtgcttg aaatgactat tgaagaatta gacttgtctg
   101761 ttcgttcata taattgtttg aaacgcgctg gaatcaatac agtacaggaa cttgctgaca
   101821 aatccgaaga cgatatgatg aaagtccgta acttgggccg taaatcgctt gaggaagtta
   101881 aagtaaaact ggctgacctt ggcttatctc taagaaacga aaactgataa aggaggcaat
   101941 tccatgggtt acagaaaatt aggtcgtaca agctcacaac gtaaagcgtt actacgtgat
   102001 cttgcaacgg atttaatcgt atttgaacgt attgaaacaa cagaagctcg cgctaaagag
   102061 attcgtaaag ttgttgaaaa actaatcact tctgggaaaa aaggagactt gcacgctcgt
   102121 cgtcaagcag ctgctttcat ccgtcatgaa gttgtagaag tagtacaagt agatgctaaa
   102181 ggtaaagatg gttcaactgt gaagaaaaac cgtcctgtat acgctctaca aaaactattt
   102241 gatgatgttg ctccacgtta cgcggaacgt caaggtggtt acactcgtat cttgaaaaaa
   102301 ggtccacgtc gcggtgacgg cgcaccaatg gttattattg aattagttta ataataaaac
   102361 gtttaaagca agtggagtgt catgatatgg agacttcgtg tttccttgtc tagctctgtg
   102421 tttcctagtc tacttaatcg taggctagga ggcaggcttt ttttgtttga cctgttatct
   102481 atgtatagca ggtctttttt tcttgccttt atactggaaa ccatctatag taaattccaa
   102541 agataaacag tgggagggac ggagaatgcg ttcgttaact aacgcggaaa tagctcacaa
   102601 tagattactt aattctggac tactacaatc taaattttcc agcgcagagg atgcaactcg
   102661 tgcgttattt ggtattcagt cgcagtatca acaatttgga gagattagtt tatttaatcg
   102721 tgtacctaat ttaaccaaag aaaacctgca aatggcttac gacgataaag ggataatcaa
   102781 aatctggggg caaagaatga ctgtccatat gtatacgccg gatgattggt tttatgttca
   102841 tgatgtttat gcgaacaaaa acaattggtt aagaaagcac gcagactctc taggacgtga
   102901 tttggatgag attttagtac aaatggaaga attactcctg cgcgaagata aagtgtctaa
   102961 agagtccttt gcggctttac taggtaatga agcaaaagag ctgatgacat ggggcggggt
   103021 ttttattcaa gggtcactcg atggcaagtt gttttgtgtg ccagaaagtc ctaaaacaaa
   103081 attttatagt catagaaacc aaattgattc agaaagagaa gatgcttgga taactaacaa
   103141 gcgcagcaag acaggtcttg aaacaatgat tgatcgttat tttagtgcat ttgggccagc
   103201 gactatacaa gatttcaagc attggagtgg tttgcgaaat agtgattata tagaaacgtt
   103261 agaaaagtta cttgaaaact atatatgcta tatcggtgaa gatggcaaga actattatag
   103321 caaagcaaaa acgcaggaaa atgtggagat ggggtcgccg cttctattag ggaagtttga
   103381 tccgcttttc gtaagttacg cgaaaaagaa ttggcttgcg agcgaaaaag aaacgagtct
   103441 aatctggcgc accgctgggc aaattgaagc tgtcttaata ataaatgctc agttttttgg
   103501 aacgtggaga tataaaatat cgggggataa aatagttttt caattctatc ttagtaaaaa
   103561 actaactaaa aaaggacaaa aattagtaga aaaagaagcg ataaaactag ctgaattcct
   103621 ccttaaaaac taccaaggca gcatttttga acaaatttaa aagaaccccc gtcagaacgg
   103681 gggttctttt cttataaaaa tggcatttct ggaaaataat ccaaaggtaa tttgatactg
   103741 gtagtgatat ttgctttacc catgttgcat acttgaaact cagcctgcag tgatagaagg
   103801 aacatcgcat cttcagttgt cattttatct gattcagtaa gtaaagttat catattttgc
   103861 atcgcttttt ttgccgcttt ctcaatagtg agatctgatg ctaagcaaat taaatggttg
   103921 tcatgaatga ttgtgggtgt gggagctgtt cgatttttaa ggatttgaag tcgtaaagtg
   103981 atttctgctg gcgcctctgc actcgtggta gtagttttcc cgaagccagc tgtagctcga
   104041 acattgccga tgtaaagcga tgcaccctgt ttttcaactg gtaaaaagat cgttgcacct
   104101 tctgtaatct cggatgagtc gagtaggccg tcgttgttag ctggtgattt ggaggtaagt
   104161 aagccttctg ttcgtagcaa tccgatagtt ttagttatcg gaatatgaat ttcatctgaa
   104221 tacataattc gattctctct gactttgtag caacgagtat agttgcttgt taataaatca
   104281 tctgttatac caacatttgg tccgtttagt aaaaatacct ccgtccctag gagttcaatt
   104341 ttttcaatcg ttaccgctaa taaatctcca cttctagctt cttcgatata gattggtcca
   104401 gtagttggtg aaaattgttt ccaatctagg tccccgtatt gaagctgttt gttttgaatt
   104461 tggccattga agtagtcttt tgtttttatc tttactacag agccatcttt cactgtaatt
   104521 gcaggttccg ccgatttatc catcttaaaa accgcgcgtt ctgaagttac aaagtttttc
   104581 atctcttccc ttctctctat attctattag tagtgacggg tgaattatag caaaatgaga
   104641 agtaggaagt aaatggatat tctgtgaaca aaaccgagtt gcaaacagta gaaagcaatt
   104701 ctttattcca ttttttcaac ggttacattg ggaagagttt gtataaagtg aaatagttcg
   104761 tattcatcgt tcttattctt tgtttttaca acaatattca cgcgaataaa aagactttct
   104821 ccgataagtt ctttttcact tgagtacgaa acgatttgtt gtttgttttg ttggatcttg
   104881 tccgtgacct tcactagatt ttcttgtttg tcggttgaat agataattgc agttgtatga
   104941 aaggcaaatg atttgaaaac gatactcaag aattctaatc cgattaaggt aagtaaagta
   105001 gcggcaattc caacccagta catacctgca ccaatagcaa ggccaatgcc agctgtggcc
   105061 caaagtccgg ctgctgttgt tagaccgcga acaaatttct tttgaataat aatcgtaccc
   105121 gcgccaataa agccaatccc gcttaccact tgagcagcga cacgacttgg gtcaaacgat
   105181 acattttgca tggtggcaat ttcggaaaaa ccatattgag aaacaatcat aattaatgcg
   105241 ctaccgagcg aaacaagaaa atgtgtccgg aatccagctt ctttcgctct gatttctcgg
   105301 tcaagtccaa taattgctcc aaggagaccc gcaacaacaa gccgtaaaat aaaatctgct
   105361 aacatagtta tcacatcctt aacgttaata tattcccttt ggcattaaac caaaacaatc
   105421 aaaaaggaaa ttttgcgccg gatggatgtt tatactataa taaacaatga atggtcaaaa
   105481 agtgaggtgt taagcgtggc agaaagtttt gtgagattag agcacgtttt ttataaatat
   105541 gaggatacgg aaaaatatgc agtgaaagat gtatctattt ctgctcaaaa aggggaatgg
   105601 gttgcacttg ttggtcataa tggttcaggt aaatctacca ttgcgaaatt actcaacgga
   105661 ttgctttttc cagaagatgg tttaatcaaa atcggacact ttgttttgtc tgaaaaaaat
   105721 atatgggaca ttagacgaca agtaggaatg gtttttcaaa atccagataa ccaatttgtt
   105781 ggagctacag tgcaagacga tgtcgcgttt ggacttgaga atcacggggt tccgcacgat
   105841 acaatggtgg aacgcgtcga gtcagctttg aatgaggttg ggatgcaaag ttatgcacta
   105901 catgaaccag ctagactttc tggtgggcaa aaacaacggg tagcaattgc tggcgttttg
   105961 gcgctgcaac cagatgtcat tattttggac gaagcgactt ctatgcttga tccaagaggg
   106021 cgcgccgaag taatggaaac tattcggatt atgcgtgaac aagaagacat taccgttatt
   106081 tcgattacac atgatttgga tgaagttctt tttgcggatc gagtaattgt tatgaataac
   106141 ggagaagtcc acagtgaagg cacaccgcaa gaaattttcg agcaagcaga tgcaatgcgc
   106201 gaaattggct taggtgttcc atttattatt gaattacaag aaaaattagt tgcaggtggc
   106261 tttgaaactg gaagcaccgt gctatcggaa ggagcattac tagatcaatt atggaaatta
   106321 aactcgaaca actaggttat tgttatcaaa aaaatagccc ttttgaaaag cgagcattac
   106381 ttgatgtgaa tgtttctttt gattctggta gctattctgc aattattggt catactggct
   106441 cagggaaatc aactttgcta caacacttaa acgctctttt aatgccaaca gaaggtaaaa
   106501 tcacagttgg tgatcgagaa atcgttgctg gcgtaaagca aaagaaacta cgtgatttac
   106561 gtaagaaagt cgggattgtg ttccaatttc cagaagcaca actttttgaa gaaacggtcg
   106621 aaaaggatat ttgttttgga ccgatgaact ttggagtttc cgaggaagat gcaaaactac
   106681 gcgctaaaaa agtgatttat gaagtgggac tgaccgagga aattttgtca cgttcgccgt
   106741 ttgaactttc tggtgggcaa atgcgccggg ttgcgattgc aggtgttttg gcgatggacc
   106801 cagaagtact tgtgctagat gagccaacag cgggactaga tcctcatggc cgcgaggaaa
   106861 tcatggaaat gttctacaat cttcataaag aaaaagggct tacgacagta cttgtaacac
   106921 acagtatgga agatgctgct cgttatgcgg aaaagattgt cttgatgaaa gctgggacgg
   106981 ttcttcaaat cggtacgcca cgtgaagttt tcgcgaagcc agacgaactg gttgatcttg
   107041 ggttatctgt accggatgtg gtgagattcc aaggactttt tgagcgcaaa tttgatgtga
   107101 aattaacaaa aacttgttta accattgatg aattaacgac cgaaatggcg ccttatttag
   107161 cgaagggcgg ggcataatta tgatggataa aatgattctc ggacgttata ttccgggaaa
   107221 ctcttggttg catcgaattg acccacgtgc gaaaatcact gctgttatgg cgtttatcgc
   107281 gattgtcttt ttagcgaaca attggctgac ctatgcgctt atgtttgcgt atgttttgta
   107341 tttagtccta acttcgaaag tgccattttt attttttatt aaagggttac aaccgatttt
   107401 ctggcttatt ttaattacgc tattacttca agtctttttt acaaaaggcg ggacagtttt
   107461 agtcgattta ggacttttac aaataacgac actcggactg acaaatggag cgatgatgtt
   107521 ttgtcgcttt gttctcatta tttttatgac aacactttta acattaacga caagcccgat
   107581 tgaactaaca gacggactgg agaaaatttt agcgccgttt cgtttagtac atttaccagt
   107641 acatgaactt gctttgatgc tgagtatttc tttacgattt attccaacat tgatggatga
   107701 aacggagaaa atattaaaag cgcaaaaagc tcgtggcgtt gaatttacga gtggaaaatg
   107761 gagtgatcgg attaaagcga ttattccgtt gcttgtgcca ctttttatta gtgcgtttaa
   107821 acgtgcggaa gatttagcga ttgcaatgga agcacgcggt tatcgtggtg gtaaagggag
   107881 aacgagattc cgtttactac gctggcgatt tgcagatacg ttgctactga tttcgttagt
   107941 agtgttaagt ggattattat tttggttgcg gagttgaaat aaatgacgag atataaagcg
   108001 ataatttctt atgatggtag cgggttttat ggctatcagg tgcagccgaa tacacggacg
   108061 gtccaagcgg aaattgaaaa agcactgaca aaaatgcata aaggcaagac tgtgcggatt
   108121 acagcatcag gaagaacaga tactggtgtt catgcgaaag gtcaggttat tcatttcgat
   108181 tcggaacttg atatcactgc cgaaaaattt caaaaagctt tgcaagtcat gactccgttc
   108241 gatattagct ttttaacagt ggaagaagta ccagacgatt tccacgctag atttggcaca
   108301 gttggaaaag aatatcgtta tgtggtaaag cggacgaaaa tttttgatcc ttttagtcgg
   108361 aattttgcgc tacattatcc atatgaactg gacatttcaa aaatgaagtt ggcgagtaaa
   108421 cgcctgattg gcgagcatga ttttactagc ttctgttcgg cgagaacgga gcgcgattct
   108481 aaagtccgaa cactttatag tattgatttt tatgaagagg acgacgagac gttagtgatt
   108541 gcttttcaag ggaatggctt tttgtataat atggtgcgaa ttttgacggg aactttgctc
   108601 gatgcagggc aaggtcgaat ctctccggat gatattagtg aggctttatt agcacgtgac
   108661 cggcaaaaat taattagtaa aactgcgccg ccacaagggt tatatttatg gcgagtggac
   108721 tatgaataaa aattggatgt ttttttgcag aacgcattga ctttttgctc caaaaactgt
   108781 attatggact atggtattgt ttgccccaca ataagccccg gaaggttgtt gtgtttaaac
   108841 aataaaaata tagaatagca tttcgggaat taggaacagt tttcgggagc taatttgttt
   108901 caatttattt aggagggtaa ttcatgcgta caacttatat ggcgaaaccc ggcgaagtag
   108961 aacgtaaatg gtacgttatc gacgctactg gtgtttcttt aggacgttta tccagtgaag
   109021 ttgcttcaat tcttcgcgga aaaaacaaac cacaatttac tccacatatc gacactggag
   109081 actttgtaat catcatcaac gctggtaaga ttggtcttac tggtaaaaaa gctactgaca
   109141 aaatttacta ccgtcactct caatatccag gcggtttgaa atctcgtact gcaggcgaaa
   109201 tgcgtacaaa caatcctgag aaattattag aactatctat caaaggtatg cttccaaaaa
   109261 attctcttgg acgtcaatta ttcaaaaaat tacacgtata tggtggagct gagcacgaac
   109321 acgcagctca acaaccagaa gtatacgaat tacgcggtta attaataaag gaggaatact
   109381 aagtggctca agtacaatat tacggaactg gtcgtcgtaa aagctctgta gctcgcgtac
   109441 gtttagtacc aggcgacggc aaaatcgtta ttaacaatag agactgggaa gattacatcc
   109501 cattcgcagc tcttcgtgaa gttatcaaac aacctttagt agctacagaa actttaggta
   109561 actatgatgt actagtaaac gttcacggtg gtggttacac tggtcaagcc ggtgctatcc
   109621 gtcatggtgt agctcgtgca ctattacaag tggctcctga gtaccgccca gcacttaaat
   109681 ctgctggcct acttactcgt gacccacgta tgaaagaacg taaaaaatac ggacttaaag
   109741 gcgcgcgtcg tgcacctcag ttctcaaaac gttaatagaa acattgatat atcaatgttt
   109801 acagagcttt tttggttcaa gttggttcaa atcaacttga accttataaa gcacttaaca
   109861 gatttaaagc atcggcatct tgctggtgct ttttttctgg cattaattcc agataataat
   109921 tctgtgtggt ttgaatatta atgtgaccta atcgctttga tacataagca atatctatat
   109981 cttgagcaaa taaaaacgat gcatgagtgt ctcttaaacc gtgaaacgtt gtcttcttaa
   110041 tatctaattt cttcaataac tccgctaatt gttccgactg tttaaaaccg ccaaagctga
   110101 aaatataacc atcctcttta acaggaattt tacgaatgag ttcatatact tctttgttaa
   110161 tagaaacatc acgttttgca tttagtgtct ttaacgaagt gtcatcagaa gtaggactga
   110221 ttgaatgcct aacttttatt ccgtattcat aaagactctc tgggcgtatt gctagtagtt
   110281 ccccacgttg catacctgtt tctaatgcaa gtaatacaag taagttaaat tcgtcttctg
   110341 gatgctgtaa aacgtagtta cgaagctttc taaaatcggt gatagataat gctttattac
   110401 gtttaggtgg cttttcccct cgggttttca ctaatcgtgc aaaatcattt gcaatatatc
   110461 cacgagcata tgcatcacgt aaagatgttt ttattttaag aagaacctca tgtgttgttt
   110521 ttcgagaatg tgtcttggca tactcatcaa ccttcttttg aacaacaata tcatttaaat
   110581 cttttaattg gatgtcttga aataaatttc gaataatgcc taaggtacga acgtaatttt
   110641 gaaatgttgt ttctttaaca tcatttactt ttacaagata aatccaattc tcgaagaagt
   110701 ccgcaaatgt tgtcgttctg tgagcaagtt ctttaccttc tcctttcgct aattccattt
   110761 ctaacgccca aagattttcc tctttctttg tcgaaaaggt ctgagaaatc tttttatgtt
   110821 gaccgtgctt atataatgaa acttgtgccc tg
//
LOCUS       DASDYK010000002        84820 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.002, whole genome shotgun sequence.
ACCESSION   DASDYK010000002 DASDYK010000000
VERSION     DASDYK010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 84820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 84820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..84820
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.002"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(502..846)
                     /gene="rplS"
                     /locus_tag="U0308_000126"
     CDS             complement(502..846)
                     /gene="rplS"
                     /locus_tag="U0308_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEM2315143.1"
                     /translation="MNKLIDEITKSQLNPDVPNFRPGDTVRVHAKVVEGTRERIQLFE
                     GVVIKRRGAGISETFTVRKISNSVGVERTFPVHTPRIAKLEVIRRGKVRRAKLYYLRN
                     LRGKAARIKEIR"
     gene            1055..1489
                     /locus_tag="U0308_000127"
     CDS             1055..1489
                     /locus_tag="U0308_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2315144.1"
                     /translation="MEQWTVKEMAAYVGISADTLRYYEKNKIIVPNRLENGYRVYNTE
                     HLLELKFILVMKYARFSLSEIKLMMEWLRSEPSVACNTASKELLALKAAEIKQTIAHY
                     TKIAALLEELPQIDEVQDYSTVQKDVNTFVEHIFTDIRKDGF"
     gene            1489..2100
                     /locus_tag="U0308_000128"
     CDS             1489..2100
                     /locus_tag="U0308_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003739212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEM2315145.1"
                     /translation="MAKIVAIIGDPREKGTSRDLFQKYLAVFQEQPTIEVKIYDIRKL
                     AFDPNLPEGYRTEQTPDIIALKNDVRSADLLLFSYPVWWFNVPAVLKGVIDHLFWPGE
                     SYSFKDKKYFLTGPWRKKRARLIYTIGGMEIQHRLFARPALTALRYPLWMSGVFSVKV
                     TSIDRLDLSIRRTDDYYDKKVTRAAKRDIQFLLKKQIRKKVFA"
     gene            2097..2813
                     /locus_tag="U0308_000129"
     CDS             2097..2813
                     /locus_tag="U0308_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2315146.1"
                     /translation="MKITAKHQYWQITTLPYLFPVNCYLILEKDGLTLIDTGILSNAK
                     GIIALIHKLNLPLKRILLTHAHGDHIGGLVAVKAAFPEALVMIGSREKLLVETKEIYA
                     FEAQKPLKGGYSDQLPVSIDHILKDGDMIGSLLIIDTPGHTPGSISFFDERNGHLFVG
                     DLFQTRGGAAICGEKRWLFPFPAMGSWDLPTSIASAENLQLFDVTEIACGHGPVKAMA
                     DFDLTNVLKRAKKQATNEKD"
     gene            complement(2844..3233)
                     /locus_tag="U0308_000130"
     CDS             complement(2844..3233)
                     /locus_tag="U0308_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315147.1"
                     /translation="MAIFGTPDEKETKKSERQKEREAYVQEENDQKRIGQRWQDIQVS
                     TGPINVNHDILTVVFAKSVRPRIKSDPEAYLETVGFENLLQELQKKALDAGGNGLIHC
                     SFTEQFVDGLVYQLAYGTAVNIKITRF"
     gene            complement(3253..3990)
                     /gene="trmD"
                     /locus_tag="U0308_000131"
     CDS             complement(3253..3990)
                     /gene="trmD"
                     /locus_tag="U0308_000131"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEM2315148.1"
                     /translation="MKIDILSIFPDMFSGVTGNSIIKKAIENERVAVEVTDFREYAEG
                     KHHIVDDYPYGGGAGMLLKAQPIFDAVQAVKEKQPETKPRVILMDPAGKRFDQKMAEE
                     FAEEEHLVFICGHYEGYDERIREHLVTDEVSIGDYILTGGEIGAMIVMDSVIRLLPGV
                     LGNKDSAVTDSFSTGLLEHPHYTRPADFRGMKVPDILLSGNHAWIEEWRDKESLKRTY
                     ERRPDLLKNYPLTDKQKTWLKEWSDSK"
     gene            complement(3990..4508)
                     /gene="rimM"
                     /locus_tag="U0308_000132"
     CDS             complement(3990..4508)
                     /gene="rimM"
                     /locus_tag="U0308_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEM2315149.1"
                     /translation="MEKMYNVGKIVNTHGLIGEIRVIATTDFPEERFQVGNTVYLFEK
                     NSKKPEKLIIRSHRKHKNFDLLMFEGFTGIHQVERMKEGVLKIKEAQLTDLEENEFYF
                     HEIIGCIVVTTDGEELGEITEILTPGANDVWVVKGSDKKEKLIPYIADVVKEININDK
                     KITIEVMEGLLD"
     gene            complement(4518..4904)
                     /locus_tag="U0308_000133"
     CDS             complement(4518..4904)
                     /locus_tag="U0308_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlqD family protein"
                     /protein_id="HEM2315150.1"
                     /translation="MEIIQKVVVKQILTEASKQELIEYYTEQKRQIEQECDQLHFEQK
                     KMERKSKFQPERVADYFTHELDLRREKKKLIQFQMEQLEVLELGSEIREREMETIIDV
                     QVGDKWDKSIFDKTIVVKDGIIVEIR"
     gene            complement(4932..5666)
                     /locus_tag="U0308_000134"
     CDS             complement(4932..5666)
                     /locus_tag="U0308_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEM2315151.1"
                     /translation="MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIA
                     LPIDDPSVAVQAISLVDGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAA
                     LDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTS
                     ELAKHHPNKKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPE
                     LMFQTDPESEQLFRALVDESKKTMVK"
     gene            complement(5777..6007)
                     /locus_tag="U0308_000135"
     CDS             complement(5777..6007)
                     /locus_tag="U0308_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HEM2315152.1"
                     /translation="MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRV
                     IGKQGRIAKAIRTLVYAVGSKNDKKIRLEIIE"
     gene            complement(6024..6296)
                     /gene="rpsP"
                     /locus_tag="U0308_000136"
     CDS             complement(6024..6296)
                     /gene="rpsP"
                     /locus_tag="U0308_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEM2315153.1"
                     /translation="MAVKIRLKRIGSKKKPFYRIVVADSRFPRDGRSIETIGTYNPLL
                     DPVEVKIDEEATLKWMHNGAKPSDTVRNLLSREGIMEKFHNQKLGK"
     gene            complement(6399..8057)
                     /locus_tag="U0308_000137"
     CDS             complement(6399..8057)
                     /locus_tag="U0308_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(glycerol-phosphate)
                     alpha-glucosyltransferase"
                     /protein_id="HEM2315154.1"
                     /translation="MPWRGILDELENKIIDQLTEDEEHATYNGKWHGFLTIGYKNKRA
                     IVINFSYLCLANLINEMKKSAIKNQTEEAISFKIDVAVDYRLENLGEWNKKALKTKKN
                     YYRRGIALNENFKIALMEQEINANAILLPGDEGLAINVENMNRYLIQTNKNQAQLNLT
                     VDSTIVTFNTVGWFFDGKKIHELEPSELEHGRRSTKQLTPDAVFELVGNAGNYLVSQV
                     NQTGEFNYGWFACFDKKIKHYNSLRHASTTYSMLEAYELTGDKTILEAATSTLTYLEQ
                     NFIYEKDELAFLIEPGLREVKLGGSAATLLALTKYMKITGTKTYLPLSRKIANAIISL
                     QEENGKFTHVLEYPSLEVKDIFRIIYYDGEAVFGLLRLYEIDRDSKWLEAAAKSFDHF
                     IRDDYWQNHDHWLSYCANEITKYIPDEAYYEFGMKNAFDNLPFIYGRETTFPTFLELT
                     VATKEMSLRMETEDLQKLLHDYPLAELEKTITKRAIYQLNGYFYPELAIYYKNPARID
                     GSFFIRHQSFRVRIDDVEHNISGYVRYHHLLKQGKLSAEAETVK"
     gene            complement(8131..10692)
                     /locus_tag="U0308_000138"
     CDS             complement(8131..10692)
                     /locus_tag="U0308_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2315155.1"
                     /translation="MKKQRVDYKRRLDQKRAQKAKLIAALITTTTMMVAPVTVNYDSF
                     NHQFALSGIQADAATIDLLGNSNLNTQYSNGKLVITLSGNQLVSASAVSTYYPYFELP
                     SELSSILSNPNIRANTKIDYKIAYLGIGGIGLFNQGTVNGSNSSNFFIDSSRNAVGAK
                     VNHLLGVGVGSISTFTLTIDLLALGVTALPSANDGKLDFAARTGDGLLDVDLLNSNAA
                     RGFITTDVGDADADADADADADADADADADADADADADADADADADADADADADADAD
                     ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
                     ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
                     ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
                     ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
                     ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
                     ADADADADADADADADADADADADADADADADADADADADADADVDIDWRDFLVEKPT
                     VNPIYEGTKTISGTSIYKNMNINTLLKSLQSDAPAGTTFYINLTLPDGTVIGNVLIHA
                     DGTYTINIPNYNLKAGDVIHLQVTAKYGNEVKTSEDVAVTVLPLADSDADADADADAD
                     ADADADADADADADADADADADADADADADGGSNPSTNGGTTGTSNGGTGVTVTNMSS
                     NGSGTMLSSGYSADGTTSISASDLPSTGDTNSSLPWVGLGLFSLAGAFLLRLFRK"
     gene            complement(11172..12068)
                     /gene="lipA"
                     /locus_tag="U0308_000139"
     CDS             complement(11172..12068)
                     /gene="lipA"
                     /locus_tag="U0308_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine/lipid phosphatase LipA"
                     /protein_id="HEM2315156.1"
                     /translation="MKHWVKVTGAGVLSATLLLGGCGAQSEEKAEANVKTEQTVKPGS
                     QIKLEGAVNVRDLGGYKTTDGLTIKPHKLIRSAELANLSDSDKKKLVNTYDLSHIVDF
                     RTSSEVAAKPDPKLTDVDYTHDSVMKDNGASTSTQDLTASLAKMDNPETFLINANKSF
                     ITDETSIQAYKDFFDILLANQDGSVLWHCTAGKDRAGFGTALVLSALGVDKNTVINDY
                     MLSNKYRALENKKAIEAVAAKTDNKKVIDGMTAVMEVRESYINAAFDEIDAKYGSMDN
                     FLKEKLGLTDAKKEQLKKAYLY"
     gene            complement(12211..13563)
                     /gene="ffh"
                     /locus_tag="U0308_000140"
     CDS             complement(12211..13563)
                     /gene="ffh"
                     /locus_tag="U0308_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEM2315157.1"
                     /translation="MAFEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADV
                     NFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPT
                     VIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPV
                     FSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEI
                     LLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIAT
                     GEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDF
                     LEQLQQVKQMGPLDELLKMMPEANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNPD
                     IINASRRKRIARGSGRPVQEINRLLKQFGEMKKMMKQMTGGGKGKKGKNPFGNFKMPF
                     "
     gene            complement(13576..13908)
                     /locus_tag="U0308_000141"
     CDS             complement(13576..13908)
                     /locus_tag="U0308_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding protein"
                     /protein_id="HEM2315158.1"
                     /translation="MFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEF
                     EVSRQAIYDNIKRTEESLEKYEEKLGMLKKYQQREKLFSQLEAQLTKKNFLDEQVKDT
                     LEQLKNID"
     gene            complement(14021..15007)
                     /gene="ftsY"
                     /locus_tag="U0308_000142"
     CDS             complement(14021..15007)
                     /gene="ftsY"
                     /locus_tag="U0308_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEM2315159.1"
                     /translation="MTFFKKLKDKITQQTDSVSGKFKDGLSKTRGNFSGKINEMVARY
                     RKVDEDFFEELEEILIGADVGFETVMELVDTLRREVQLRNISDPKDVQEVIVEKLVEI
                     YQGDEKEDEALHIEEDGLTVILFVGVNGVGKTTSIGKMAHRFKQEGKKVMLAAGDTFR
                     AGAIDQLEVWGERTGVDVIKQAEGSDPAAVMFDAVQAAKARKADVLLCDTAGRLQNKV
                     NLMNELEKVKRVITREIPNAPHEVLLVLDATTGQNAFVQAKQFKETTDVTGIILTKLD
                     GTAKGGIVIAIRNELDIPVKFVGLGEQMDDLQAFDANEYVYGLFADMVDNEK"
     gene            complement(15022..18582)
                     /gene="smc"
                     /locus_tag="U0308_000143"
     CDS             complement(15022..18582)
                     /gene="smc"
                     /locus_tag="U0308_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEM2315160.1"
                     /translation="MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAI
                     RWVLGEQSAKSLRGGRMGDVIFAGSDTRKPINFAEVSLILENEDHFLPLDYSEVAVTR
                     RIYRNGDSEFLINKENCRLKDIVDLFMDSGLGRESFSIISQGKIDEILNSKPEERRSI
                     FEEAAGVLKYKHRKKQAENKLFETEENLNRVQDILYELEGQLEPLEMQASIAKDYLFQ
                     QEELEKYEVTLLASEISSLTEKLAEVRKEFGENQTVLIKLREELHAEEAVISREKHAL
                     NETDIALDNLQERLLVETEKLEQLEGERNLQLERKKHSSENEQVYAETLAAITEKITA
                     LEEQKEVLSSSKLEKETALEIAVKAKKELEVTLAKYDDLSEEAIENRKSDYIDLRHTQ
                     TTINNDLGYIERQIGQITSRIDKLDLENSHHIDDRKDMLAQIETTKTHLTKIQSELTE
                     QMEIYREVQQTLAKQEAVFGTQERALYKHYETVQQMKSRKETLEELADDYAGFFQGVR
                     EVLKAKKEIPGILGALVELVEIPAKYQQAMETALGASAQNVVVEDDRVAREAISFLKK
                     TKSGRATFLPLSTIQPRELPAATKNALSNQPAFIALASEVISFDEKVSPVILNALGTT
                     ILAKDLKGANTLARLVNFRYRIVTLEGDVVNAGGSMTGGATKGGKSSILTRKHELGQL
                     AEKITELNEATREMESAVQLAKDSMAKKREELEETRGIGENLRLQEKELLGKLDRETE
                     NLERFNKQLQLYDIEKADGSEELNKLLERKETLLHEQVEIAKQIEATDEEIKAMTSSS
                     KALESKRAADLESLSSLKAQIAAKREQLQSATEAVERVTTTLHENYEQKEAAEQKLAS
                     LKTNLTSVHTSEESARKSIEELRKDKAETSEKLAQTRQTRAELQEKLELLEAELTQKN
                     NQISFYVEQKNNAEISIGRLEVDINNRIDRLQEAYLLTPEQAEEKILPEVNTEQARSK
                     VRLLKRSIDELGIVNIGAIEEFERIQERFDFLNRQQADLLAAKETLFKVMDEMDEEMK
                     IRFSESFEAIKTEFAIVFPELFGGGSAELVLLDPENLLTTGIDIVVQPPGKKLQNLSL
                     RSGGERALTAIALLFAIIRVRPVPFCILDEVEAALDEANVTRFSRYLKQFESGTQFIV
                     ITHRKGTMEEADVLYGVTMQESGVSKLVSVRLEETAELIK"
     gene            complement(18605..19294)
                     /locus_tag="U0308_000144"
     CDS             complement(18605..19294)
                     /locus_tag="U0308_000144"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEM2315161.1"
                     /translation="MNQWEELQESVGFDFKDVELLKQAFTHSSYVNEHRRENVKDNER
                     LEFLGDAVLELTVSNYLFNKYPDMAEGHMTKMRAAIVCEPSLVEFAEAVHFSKYVRLG
                     KGEEKAGGRTRPALLADVFESFIGALYLDNGIDKVVTFLERVIFPKIDAGAYLQTVDY
                     KTQLQEIVQRDRDVLIEYDILGETGPAHNKAFDAQVIVNGQVLGKGSGRTKKQAEQSA
                     AQFAINQLTHR"
     gene            complement(19489..19722)
                     /locus_tag="U0308_000145"
     CDS             complement(19489..19722)
                     /locus_tag="U0308_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEM2315162.1"
                     /translation="MAEVLEKVTKIIVDRLGVEESKVTLEASFKEDLGADSLDVVELV
                     MELEDEFGVEISDGDAENINTVGDAVKYIEANA"
     gene            complement(19829..20572)
                     /gene="fabG"
                     /locus_tag="U0308_000146"
     CDS             complement(19829..20572)
                     /gene="fabG"
                     /locus_tag="U0308_000146"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEM2315163.1"
                     /translation="MTLQGKVAVVTGGSRGIGRDIAIKLAKEGANIFFNYNGSPEAAE
                     ETAKLVAEHGVEVEAMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRM
                     KEDEWDDVININLKGTFLCTKAVSRTMMKQRAGKIINMASVVGLIGNAGQANYVASKA
                     GVIGLTKTTARELAPRGINVNAVAPGFITTDMTDKLDEKTKEAMLAQIPLGAYGTTED
                     IANAVLFLASDASKYITGQTLSVDGGMVM"
     gene            complement(20576..21517)
                     /gene="fabD"
                     /locus_tag="U0308_000147"
     CDS             complement(20576..21517)
                     /gene="fabD"
                     /locus_tag="U0308_000147"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEM2315164.1"
                     /translation="MTKIAFVFPGQGAQKIGMGQDVAAEYPEAKKIYDDADERLGFSI
                     TEIITEGPIELLTKSENAQPALVSTSVAILRALETYGVKADYVAGHSLGEYSALVAGG
                     FLEASDAIYLVRKRGELMEAAVPNGAGAMAAVLGVDRETLKTITEEVTKEGDAVQLAN
                     LNCPGQIVISGTTAGVEKAGGKAKESGAKRVLPLAVSGPFHSSLMEPAALAFRDVLAE
                     VKISDGQIPVVNNVDAKETTDKSEISDKLIKQIYSPVLWEDIVEELIKNGVDTFVEIG
                     SGKVLVGLIKKINRDVTVLSAGDAESVKSVAATLKGE"
     gene            complement(21510..22523)
                     /gene="plsX"
                     /locus_tag="U0308_000148"
     CDS             complement(21510..22523)
                     /gene="plsX"
                     /locus_tag="U0308_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEM2315165.1"
                     /translation="MKIAVDAMGGDHAPKEIVLGVMKAVAQYKDVEILLFGDETKINE
                     YLTDKTRVKIIHTDEKIESDDEPVRAVKRKKKASMVLAAQAVKDGEADACISAGNTGA
                     LMSTGLFVIGRIKGIDRPALAPTLPTVTGKGFVMLDLGANAEAKPEHLLQFGLMGSVY
                     AEKVRKIDRPRVALLNIGTEETKGNDLTKKSFELMKNQDAYEFIGNIEARDLLMDVAD
                     VVVTDGFTGNMVLKSIEGTGAAFLSMLKMSLLNGFKNKVAASFLKKDLMALKAKMDYS
                     EYGGACLFGVQAPVVKAHGSSNANGIFTTIRQVREMVEKQVVETIKAEVDKVKVGGTE
                     SND"
     gene            complement(22544..23113)
                     /gene="fapR"
                     /locus_tag="U0308_000149"
     CDS             complement(22544..23113)
                     /gene="fapR"
                     /locus_tag="U0308_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription factor FapR"
                     /protein_id="HEM2315166.1"
                     /translation="MKKYSKKDRQMKLQVAIEENPFITDEQLAEKFGVSVQTIRLDRV
                     ALSIPELRERIKHVASVNYADAVKSLPIDEVIGEIIDIQLSKSAISIFDVRSEHVFKR
                     NKIARGHHLFAQANSLATAVIPNEIALTTQATVRFVRSVNEGERIIAKAKVRPATDNR
                     AITIVDVKSYVGDEIVLKGKFEMYHATQK"
     gene            complement(23295..25343)
                     /gene="recG"
                     /locus_tag="U0308_000150"
     CDS             complement(23295..25343)
                     /gene="recG"
                     /locus_tag="U0308_000150"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEM2315167.1"
                     /translation="MSELKRIPTTEIKGIGEETAKTLKELGLSTVHDLLWNFPYRYED
                     YRLRDLSEVAHEERITIQGEVLTEATVAFYGRKKSKLSFRVSTEGQVIKIDFFNQPYL
                     KSKISVGETVTISGKWDKSRAQVTASKIKIGAVESEEELEGVYRLKGTLRNKTMQKYT
                     RLAFDSYSQDIEEVIPSNLLEKYQLMDRLEAVRILHFPKNNEELKQARRRMVYEEFLL
                     FQLKMQFFRKIEREKSGGISINYDVEDLRHYIDSLPFPLTKAQKRVVNEICGDMLSHF
                     HMNRLLQGDVGSGKTVVASIAMYAAAKSGFQSALMVPTEILAEQHANSLVELLQPFDI
                     TVGLLTSSVKGKQRRELLAMLENGSIDVLIGTHALIQDEVIYHRLGLVITDEQHRFGV
                     AQRRVLREKGEYPDVLFMTATPIPRTLAITAFGEMDVSIIDELPAGRKEIETYWVKHQ
                     MLDRVIGFMEKEIDKGHQVYIICPLIGESEKLDVQNAIDVFNILQNKWGTKYIPGLMH
                     GKLLPADKEQIMRDFNNKKIDCLVSTTVVEVGVNVPNATMMVIYDADRFGLAQLHQLR
                     GRVGRGADQSYCILIADPKTEVGKERMMIMSETNDGFVVSERDLELRGPGDFFGRKQS
                     GVPEFKVADMVHDYRVLEIARQDAVHMIFEEDMLENKNYEKLVALLEEEGVFTEQKLD
                     "
     gene            complement(25336..26226)
                     /gene="sdaAA"
                     /locus_tag="U0308_000151"
     CDS             complement(25336..26226)
                     /gene="sdaAA"
                     /locus_tag="U0308_000151"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HEM2315168.1"
                     /translation="MFRTVAELVDIAERENLTIAEIMIKREMNISGLPREEITAAMER
                     NLDIMEEAIREGETGVTSTTGLTGGDAVLMQDYIKKGNFLSGEVLLDSVAKAIATNEV
                     NASMGVICATPTAGSAGVVPGVLFSLKDRLEMSREDMVNFLFTAGAFGYVVANNAFIS
                     GAAGGCQAEIGSASAMASAAIVAAAGGTPEQSAHAMAMTMKNMLGLVCDPVAGLVEVP
                     CVKRNALGSSQAIISADMALAGIKSRIPCDEVIEAMHRVGLQMPSSLRETAEGGLAAT
                     PTGRAIQRKIFGLSPEDKRE"
     gene            complement(26362..27024)
                     /gene="sdaAB"
                     /locus_tag="U0308_000152"
     CDS             complement(26362..27024)
                     /gene="sdaAB"
                     /locus_tag="U0308_000152"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent
                     subunit beta"
                     /protein_id="HEM2315169.1"
                     /translation="MKFNSVFDIIGPVMIGPSSSHTAGASRIGAIARAVFNEQPSQVD
                     IHLYGSFAKTYKGHGTDVALIGGLLGFEPDDPRMKESPKLAEEWGMRIQFIEEVEEPP
                     HPNTVKLVLKHGMQQMTLIGASIGGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAI
                     AAVSSVIADHKINIGQMKVSRKVKGDEALMVIEVDQQVEQALISKIAELPGIYQVASV
                     MI"
     gene            complement(27064..28722)
                     /locus_tag="U0308_000153"
     CDS             complement(27064..28722)
                     /locus_tag="U0308_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DAK2 domain-containing protein"
                     /protein_id="HEM2315170.1"
                     /translation="MSIYQLDSEKFAAMIALGAENLAKNADFVDSLNVFPVPDGDTGT
                     NMNLSMTSGAEEVAKNDKETISAVGANLAKGLLMGARGNSGVILSQLFRGFSKAIENK
                     ETLNAEEFAGAFVKGVETAYKAVMKPVEGTILTVAREAAKAGVAAASEHQDIELVMEA
                     ILKQGKVALEKTPDLLPVLKEVGVVDSGGQGLIIIYEGFYGALTGKMAEAPDYMASMG
                     ELINAEHHRHVQDFMSTEDIHFGYCTEIIVKINENKPGQKPFDEEQFRQDLSKLGDSL
                     LVAADDEVVKVHVHVEHPGEVLNYGQQYGSLLKMKVENMREQHTEIVGDDKVPAKEKA
                     AYGIVTVSAGEGLKKLFESMGVSVVLSGGQTMNPSTEDIVKAIESANAEQVFVLPNNK
                     NIQMAAEQAAQILGDDKVQIIPTKTIPQGLTAVLSFQADQDFLANAEAMKAAIEDVAS
                     GQVTTAVRDTTVEGVEIKKDSFIGMVEGKIKVSCATLEEAAYETLEKLLDDDSEIITI
                     IVGEDADTSKAETLADKVTEAFPDVEVEIHEGDQPVYPYIFAVE"
     gene            complement(28737..29102)
                     /locus_tag="U0308_000154"
     CDS             complement(28737..29102)
                     /locus_tag="U0308_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HEM2315171.1"
                     /translation="MAIEIDTKLGKIDITSDVIATIAGGAAEENFGIVGMASRHQIRD
                     GLTDILRRENYTKGVIVRQEEEGIHIDMYIIVSFGTKISEVAHNVQERVKYTLEKTLG
                     ITVESVNIYVQGVRVIKES"
     gene            29401..29589
                     /locus_tag="U0308_000155"
     CDS             29401..29589
                     /locus_tag="U0308_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEM2315172.1"
                     /translation="MAKECVITGRKSRSGNKRSHAMNSSKRTWKANLQKVRILVNGKP
                     KKVWVSARALKSGKVERV"
     gene            complement(29686..30330)
                     /locus_tag="U0308_000156"
     CDS             complement(29686..30330)
                     /locus_tag="U0308_000156"
                     /EC_number="2.7.6.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine diphosphokinase"
                     /protein_id="HEM2315173.1"
                     /translation="MKIINIMVGGPASEIPDLAQYTSAEISWIGVDRGAKRLLDYGIV
                     PTVAMGDFDSLSKEELAHLKTKVADVHEFPAEKDETDTEIGLSWAMEQNPDKIRIFGA
                     TGGRLDHLLANLMMLTKPKFLSAVPVVEMIDRHNYIKMYMPGSYTIEKLPDKKYVAFT
                     TMKDVTGLTLKGFAYPLENATYPVGSALSSNEFVGQMGEFSFKSGMILLTQSND"
     gene            complement(30394..31050)
                     /locus_tag="U0308_000157"
     CDS             complement(30394..31050)
                     /locus_tag="U0308_000157"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEM2315174.1"
                     /translation="MGKIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNI
                     TFGPAVVQAIRPETKLPLDVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQL
                     IRSYGVKAGAVLNPATPIDVLQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKK
                     IVDEKGLDIEIEVDGGVDHETAKLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAIVGE
                     "
     gene            complement(31053..31928)
                     /gene="rsgA"
                     /locus_tag="U0308_000158"
     CDS             complement(31053..31928)
                     /gene="rsgA"
                     /locus_tag="U0308_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEM2315175.1"
                     /translation="MLEGQIIKALSGFYYVFSEGKVYQCRARGNFRKRNISPLVGDDV
                     EFQIENKTDGYILDVMSRENALVRPPVANIDIAILVFSAVEPDFSTNLADRFLVAIEK
                     EDIKPVICISKMDLASESEKEQIAVYKDIYEAIGYDVFVTNDEPDKEAIKDYISGKTA
                     VIAGQSGVGKSTLLNSLNSDLTLKTAEISNALGRGKHTTRHVELMPIGDGFVADTPGF
                     SSIEWDDLQPETLQFCFPEMEDRRSGCKFRGCMHDNEPNCAVKTAVEANEIAEFRYKH
                     YIQILQELKNRKPRY"
     gene            complement(31947..33914)
                     /gene="pknB"
                     /locus_tag="U0308_000159"
     CDS             complement(31947..33914)
                     /gene="pknB"
                     /locus_tag="U0308_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Stk1 family PASTA domain-containing Ser/Thr
                     kinase"
                     /protein_id="HEM2315176.1"
                     /translation="MMIGKRLSDRYKILHAIGGGGMANVYLAHDIILDRDVAVKILRI
                     DLADESNLIRRFQREAQSATSLVHPNIVSVYDVGEENDLHYIVMEHVDGMDLKQYIHE
                     NHPISYDKAVDIMLQIVSAVAIAHQHHIIHRDLKPQNILIDHDGVVKITDFGIAMALS
                     ETSITQTNSLLGSVHYLSPEQARGGMATQKSDIYSLGIVLYELLTGKVPFDGESAVSI
                     AIKHLQADIPSARAQNPEIPQSLENIIIKATAKDPFLRYQNAEEMEKDLQTCLNQDRL
                     NEPKYIFPTDDGDTKAIPIIATKDTMQNLDKTIVPEGKVAAAEVAPEENKGKKKKKMS
                     KKKKIALIVSSVIIIFIIGILLLWLLGKSPDEVAVPDVSGKTEDQAVALLQKEGFVIG
                     KTAEKNSDEVAEGKVINTDPEAGEMKEKGTKINLFVSIGSKKITMDDYTGRSYTDTKA
                     LLEEQGFNNISSEEAYSSEVEKGLIISQTPTQGTDVVAKSTDVKFVVSKGAEPISLKD
                     LRGYTKTAVEDYASPLGLKVSSKEENSNTVEKGQVISQSPSAGTAMNPGDTIEIVISA
                     GPKEKQVKEVTKTFNIPYTPSDEENPQPQKIQIYIQDKDHSMTSAYREMSITQNTSVE
                     ITFQIEEGSSAGYKIISDDKVIDEGTVPYPN"
     gene            complement(33911..34669)
                     /locus_tag="U0308_000160"
     CDS             complement(33911..34669)
                     /locus_tag="U0308_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HEM2315177.1"
                     /translation="MHAEFRTDRGRIRHHNEDNGGVFENKDNQPIVIVADGMGGHRAG
                     DVASEMAVRLLSDAWKETTALLTAEEIETWLQKTIQEVNKEIVLYSESEMDLNGMGTT
                     LVAAIMAQSQVVIANVGDSRGYLLQNHVLRQLTEDHSLVHELLRTGEISKEDAMNHPR
                     KNILLRALGVEGKVEVDTFVVPFQTSDTLLLCSDGLTNMVPETEMEEILKSKRTLSEK
                     ADVFITKANSYGGEDNITVLLVERDLTQKGRDAS"
     gene            complement(34692..36026)
                     /gene="rsmB"
                     /locus_tag="U0308_000161"
     CDS             complement(34692..36026)
                     /gene="rsmB"
                     /locus_tag="U0308_000161"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEM2315178.1"
                     /translation="MKKQKTVRAIALELIIKIENNQSYSHLLINDALKKQKLNPLDKG
                     LLTELVYGTTQRKITLDYYLAPFLNKEPDNWVKNLLRMSVYQLTFLDKVPEHAILNEA
                     GDIAKDLGHQGVTKFVNGVLRNVIRKGVPSIDAIKDPVQKIAVETSLPEWLAKRWADQ
                     YGIEKLREIGLAFLVAPHQSIRVNQTEIPTEQLIKELNDQGITVTRNEFIEEALLVEK
                     GSVAETKAYKDGKCSIQDESSMLAAYALQLEDNLTVLDACAAPGGKTTHIAEKMHGTG
                     MVHALDIHEKKTKLIDQAAKRLQLLNIRTAHLDARTASTMFEPETFDRILVDAPCSGF
                     GVLRRKPDIKYAKTEKDIHKLAEIQLAILDDVSQLVKENGILVYSTCTIDKEENETVL
                     RAFLEKHPEFTLEPVVLPEKLAQIKKDDFIQLLPTDIGSDGFFVSSLRKVKS"
     gene            complement(36027..36977)
                     /locus_tag="U0308_000162"
     CDS             complement(36027..36977)
                     /locus_tag="U0308_000162"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEM2315179.1"
                     /translation="MTKIIFMGTPEFSVPVLAQLASTYDVVAVVTQPDRPVGRKRVLT
                     PPPVKKAALELAIPVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHG
                     AINVHASLLPEYRGGAPVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDN
                     TGTMFDKLSKLGAELLMDTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDWTKPGR
                     TIFNQIRGLSPWPVAYTTLEEKPFKIWEATYEETYEETKEDGEPGAILADKTTLKIVA
                     GDGTLIVPTVIQPAGKPKMDVHSFMTGAGRNLSKSTRFGE"
     gene            complement(36991..39384)
                     /gene="priA"
                     /locus_tag="U0308_000163"
     CDS             complement(36991..39384)
                     /gene="priA"
                     /locus_tag="U0308_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEM2315180.1"
                     /translation="MINIAKVIVDVPAMQVDRPFDYYIPEDLEELIRPGMRVSVPFGN
                     RKIQGFVIALGETEENPKLKGIDGVMDLAPVLNEELMELGDWLAEDTLSFRVSAYQAM
                     LPAALRAKYEKYFLRLDEENEELEQLFEGYETLDWKVAEARGLLKQIGKWVREGSVEV
                     VYQVKNKITSKKIRVVNCLKSPHQLAEIIEDMPKNAKAQSRVLAFFQAFEGNEITAAE
                     LKKQAETTDATIKKLVDLGILSIQEKIVSRDPYENHQFEKSESLQLLPDQQTACEKIT
                     AATDQETFLIHGVTGSGKTEIYLQTIEAKLKEGKEAIVLVPEISLTPQMVERFKSRFG
                     SEVAVLHSALSSGEKYDEWRKIERKEARVVVGARSAVFAPFENLGIIIIDEEHEASYK
                     QEDNPRYHARDVAIWRATKYQCPVVLGSATPSLESFARAKKGVYTLIELPSRVNDRAM
                     PEVSVVDMREELRKENRTEFSTELLEKIKERIAKKEQTVLMLNRRGYSSFVMCRDCGY
                     VVECPNCDISLTYHQSSNQMKCHYCGHEERVPQKCPSCEGEHIRYFGTGTQKVEESLT
                     KLIPEARVIRMDVDTTRTKGAHEKLLKSFRNHEADILLGTQMIAKGLDFPDITLVGVL
                     NADTMLHLPDFRASERTFQLLTQVSGRAGRHERTGEVIVQSYNPEHYSIEFAKKHDFI
                     GFYNHEMQLRKMGSYPPFYYLTMINVSDENEMKAIRTIQEMAQFLRGKLGPDAVILGP
                     VPSTITRIKNKYRYQCIIKYKIEPNLKKELKTLITHYQKDQQKGLTITIDVQPYVLM"
     gene            complement(39389..40588)
                     /gene="coaBC"
                     /locus_tag="U0308_000164"
     CDS             complement(39389..40588)
                     /gene="coaBC"
                     /locus_tag="U0308_000164"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEM2315181.1"
                     /translation="MQGKNILLAVSGGIAVYKAVALTSKLTQAGANVKVMMTEHAQEF
                     VPPLSFQVLSKNDVYTDTFDEKKSSVVAHIDLADWADLVIVAPATANVIGKMANGIAD
                     DMVTTTILATEAPVWVAPAMNVHMIQHPAVIRNINRLYADGVRFIEPEEGYLACGYVG
                     RGRLEEPEKIVLRIAEFFQEDKDLLRDKNVLVTAGATREKLDPVRYFTNHSTGKMGFS
                     IAESAARHGAKVTLVTTSKALPVPPGVEAIYVESAEEMYQAVDEHKVSQDIFVMTAAV
                     ADYTPAKVSDQKIKKQPGDFAIEMKRTKDILLEIGQHKTADQVVIGFAAETENLEANA
                     RKKLTSKNADMIVANNISVAGAGFSGDTNIVTFYRKDGSSKALPILDKKEVAEHIIKE
                     TANFLRK"
     gene            complement(40743..40946)
                     /locus_tag="U0308_000165"
     CDS             complement(40743..40946)
                     /locus_tag="U0308_000165"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEM2315182.1"
                     /translation="MLYPSIDNLLLKIDSKYSLVTVAAKRARYMQLENDKGVLPSYQS
                     DKFVGKALEEIHAGKLVLQNDDK"
     gene            complement(40946..41563)
                     /gene="gmk"
                     /locus_tag="U0308_000166"
     CDS             complement(40946..41563)
                     /gene="gmk"
                     /locus_tag="U0308_000166"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEM2315183.1"
                     /translation="MTERGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLP
                     REGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYGTPLEYVEEKLAAGVDIFLE
                     IEVQGAMQVRKAMPEGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKEIEMM
                     ASYDYAVVNDVVANAVQKIKGIVETEHLKTERVIHRYKKMLEGLQ"
     gene            complement(41582..42457)
                     /locus_tag="U0308_000167"
     CDS             complement(41582..42457)
                     /locus_tag="U0308_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HEM2315184.1"
                     /translation="MVKSMTGFGRATKEFEAFKVTIELKAVNHRYSEFLFRMPKQLAY
                     LEGKLKKIISKQIKRGRIEVFFSITGEQITKRELHIDWDLADSYYRFIKQASARYELQ
                     ELPTMADLLQEQAYLSIEEEVEASSELERLVLETLARATERLDEMRSMEGAELLLYFK
                     QHLTALEKSLEIIQAEIPNTEKHYQEKIETRLQNVVGDQFDPSIVLTEVAMLLEKADI
                     NEEVERTKSHLKQFYGIILLEEPIGRKLDFLIQEMNREVNTIGSKASSLKITEQVVEM
                     KTTLEKIREQVQNVE"
     gene            42614..44326
                     /gene="fbpA"
                     /locus_tag="U0308_000168"
     CDS             42614..44326
                     /gene="fbpA"
                     /locus_tag="U0308_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rqc2 family fibronectin-binding protein FbpA"
                     /protein_id="HEM2315185.1"
                     /translation="MAFDAMFLKAMTEELAEHGESGRIMKIHQPFSHELVLYIRKNRE
                     NKRLLISSHPSYARIQWTDDIPENPATPPMFCMLLRKYLEGAIIESITQLPNERILQF
                     SIRGKDDIGENRFCDLFVEIMGRHSNITLVDRAKNVIVDCIKHVSPAQNSYRTLLPGA
                     TYVLPPATDKLHPFEVTSEQILDRLDFSAGRMDKQLVQNFAGFSPLLAREIVFRAGNL
                     TADSLVAAFFEVIGLVNEHLGHAAVPNEWRIQNKEDYYFFPLRHVDAETTEFANLSTL
                     LDHFYIGKARRDRVHQFAHDLEKLLSNELARSRLKIEKLENTLLETEKADVYRIQGEL
                     LTANLHLMERGMEEITVENFYDDMKKMTIALDTRKTPSANAQSYFSRYQKLRNAVEVV
                     KEQIALTKEEITYLESVESQLETSGPQDVEEIRQELAEQGYLRYKQKKGSRKKATLPA
                     PEKYTSSTGLTILVGKNNKQNDYLTNKLARNNEYWFHVKDLPGSHVVIQSNDPDETSI
                     TEAAMIAAYYSKARLSATVPVDGTLVKHVKKPNGAKPGYVIYDNQTTYFVTPDEKLVL
                     ELKN"
     gene            44414..45013
                     /locus_tag="U0308_000169"
     CDS             44414..45013
                     /locus_tag="U0308_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short chain dehydrogenase"
                     /protein_id="HEM2315186.1"
                     /translation="MKILLIGASGTLGSAVKERLEKKAEVITAGRHSGDVTVDITSVD
                     SIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGINSLN
                     DNGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNILEES
                     WDKLESFFQGFVPVPAAKVARAFEKSVFGAQTGESYKVY"
     gene            complement(45053..45682)
                     /locus_tag="U0308_000170"
     CDS             complement(45053..45682)
                     /locus_tag="U0308_000170"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEM2315187.1"
                     /translation="MSIEKQVAEQLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLG
                     FPKVRQFIAKSLAEKIKQTFGEVDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEH
                     GKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVVGIAAIFTYGLAKGK
                     QLLEESGTKLVTLTNYDELIEVALNENYVTGEDMETLKEWKKNPENWGK"
     gene            complement(45679..46380)
                     /gene="pyrF"
                     /locus_tag="U0308_000171"
     CDS             complement(45679..46380)
                     /gene="pyrF"
                     /locus_tag="U0308_000171"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEM2315188.1"
                     /translation="MNKPIIALDFQTYEEVETFLAKFSGETLSVKVGMELFYSNGPII
                     VEKIKQQHHEIFLDLKLHDIPNTVKSAMIGLAKLGVDMVNVHAAGGKKMMEAAREGLE
                     IGSSSGKRPKIIAVTQLTSTSETDMQTEQLIKTSLLESVMHYSNLSKQAGLDGVVCSA
                     LEAEDIKQQNGADFLRVTPGIRLASDAADDQIRVVTPEKARLIGSSNIVVGRSITRAN
                     DPVEAYNQVLKEWNA"
     gene            complement(46377..47291)
                     /locus_tag="U0308_000172"
     CDS             complement(46377..47291)
                     /locus_tag="U0308_000172"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HEM2315189.1"
                     /translation="MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMA
                     KAVTPEPRLGNPTPRVAETASGMLNAIGLQNPGLEHVLAHELPFLEQFETPIIANVAG
                     ATEDDYVQVCARIGESKAVKAIELNISCPNVKHGGIAFGTDPDVAHRLTKAVKNVATV
                     PVYVKLSPNVADIVSIAQAIEAAGADGLTMINTLLGMRIDLKTRKPIIANGTGGLSGP
                     AIKPVAIRMIHQVREVSNIPIIGMGGVQTVDDVLEFLIAGADAVAVGTMNFTDPFICP
                     KLISELPKRMDELGISSLQELKKERANQ"
     gene            complement(47288..48052)
                     /locus_tag="U0308_000173"
     CDS             complement(47288..48052)
                     /locus_tag="U0308_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HEM2315190.1"
                     /translation="MLQTEMKVIQQTEIADKVYELILTGERVADMSPGQFLMLKPSRS
                     DLLMRRPISICSYDKTAKTCILLYRIEGDGTRDFSKLSEGDTIDVLGPLGKGFDIDQT
                     PAPKTALLIGGGIGVPPMYQLGKELAGKGVQVTFVNGFQSAKDSFYEKEMNAYGTVHI
                     ATVDGSLGTQGFVTDITNNFPEEPDVIYSCGPKAMLQAVKASFPETKTYLSLEERMAC
                     GIGACYACVCPKADDAKKQFKVCEDGPVFRADEVSL"
     gene            complement(48075..51287)
                     /gene="carB"
                     /locus_tag="U0308_000174"
     CDS             complement(48075..51287)
                     /gene="carB"
                     /locus_tag="U0308_000174"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEM2315191.1"
                     /translation="MPKRDDIKTILVIGSGPIVIGQAAEFDYAGTQACLSLKEEGYRV
                     VLVNSNPATIMTDAEMADKVYIEPITLDFVSRIIRKERPDAILPTLGGQTGLNMAMEL
                     SAAGILDECNVEVLGTDLTAIKKAEDREAFRDLMNELGEPVPESDIIHNLDEAYTFVE
                     RIGYPVIVRPAYTLGGSGGGICHNEQELIETVTSGLKLSPVTQCLLEKSIAGFKEVEY
                     EVMRDANNNAMVVCNMENIDPVGIHTGDSIVVAPSQTLSDREYQLLRDVSLKIIRALE
                     IEGGCNVQLALDPDSYNYYVIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEV
                     RNPVTGTTFAHFEPTLDYVVAKIPRFAFDKFEQADRRLGTQMKATGEVMAIGRSWEEA
                     LLKAVRSLEIGADHLLLEEAENADEATLERKICFPEDDRLFFLAAALRRGQTIEQLHA
                     KTKIDLFFLYKLSKTIELENRIKENPQNQEILAEAKRAGFSDAFLATCWNVDEQAIYD
                     LRKAQNLFPVYKMVDTCAAEFESTTPYFYSTYEEENESTRSAKESVIVLGSGPIRIGQ
                     GVEFDYATVHSVWAIQQAGYEAIIINNNPETVSTDFSISDKLYFEPLTLEDVMHVIEI
                     EQPLGVVVQFGGQTAINLADGLAKRGVKILGTSLEDTDRAENRDAFEKALEILQIPQP
                     AGKTATSVEEAINVATDIGYPVLVRPSYVLGGRAMEIVESEEALKHYMTNAVKVNPKH
                     PVLVDRYVSGQEVEVDAISDGENVLIPGIMEHIERAGVHSGDSIAVYPAQRLSSQVKN
                     TIVDYTTRLATGLNIIGMLNIQYVVDGEEVFVIEVNPRSSRTAPFLSKITEIPMANVA
                     TRVILGENLIDLGYTPGLAPEKQEIFVKVPVFSFAKLRSVDTSLGPEMKSTGEVMGKD
                     VTLEKALYKGFVASGTTMHDYGTVLLTVADRDKEEAVELAKRFNRIGFTIMATKGTAS
                     TLEEADIPVSQVKKIGENQETLIDYIRNGQVTLVVNTLTTGKRPERDGFQIRRESVEN
                     GIPVCTSLDTAEAILRVLESRSFELESMNTSEVKQPKARV"
     gene            complement(51280..52371)
                     /gene="carA"
                     /locus_tag="U0308_000175"
     CDS             complement(51280..52371)
                     /gene="carA"
                     /locus_tag="U0308_000175"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEM2315192.1"
                     /translation="MTKRILMLEDGNYFIGDAIGSEKETIGEVVFNTGMTGYQETITD
                     PSYYGQIITFTYPLVGNYGVNRDDFESINPAVKGVVVREAAEFPSNWRNQITLDDFLK
                     EKGIPGIAGIDTRKLTKLIRKEGTLKGILAAETANKEELLHHLRSVRLPVDQVHEVSS
                     AKAFASPGDGKRVVLVDYGVKSSILRELNKRNCYVTVVPYNTTAEEILAMHPDGVMLS
                     NGPGDPKDVPEALEMIRGIQGKLPLFGICLGHQLFALANGADTFKLKFGHRGANHPVK
                     ELATGRVDFTAQNHGYAVEKDSLIGTDLKVTHIELNDETVEGLAHKEYPAYTVQYHPE
                     ANPGPSDVNYLFDEFMEMMNGKEEGELHA"
     gene            complement(52368..53648)
                     /locus_tag="U0308_000176"
     CDS             complement(52368..53648)
                     /locus_tag="U0308_000176"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEM2315193.1"
                     /translation="MYVLKNGQVLNASGELENKDVLIQNGKVNLIADSIEVTSGEEFD
                     ATGKLIAPGFIDVHVHLREPGGEHKETILTGTQAAARGGYTTICSMPNTKPVPDSKEV
                     MESLQAKIKETAKVRVLPYASITTSLGTDELVDFEALKEAGAFAFTDDGVGVQLAGTM
                     YEAMKRAAALDMAIVAHCEDNSLIYGGVVHDGIFAEKEGLKGIPNIAESVQIARDVLL
                     AEAAGCHYHVCHISTKESVRVVRDAKRAGIRVTAEVSPHHLILDEEAIPGNDGNWKMN
                     PPLRSKEDRAALLEGLLDGTIDFIATDHAPHAAEEKNVPMEQAAFGIVGLETAFPLLY
                     THFVKTNEWTLKQLIDWMTVKPAECFKLPYGKLEEGSVADIVVLDLEKEANIDPATFY
                     SKGKNTPFVGETCIGWPVATFSEGTLVYNEGEIK"
     gene            complement(53636..54547)
                     /locus_tag="U0308_000177"
     CDS             complement(53636..54547)
                     /locus_tag="U0308_000177"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEM2315194.1"
                     /translation="MKNLLSMEALTVHEIEHLLEQAAQFKRGKKATFNEQTFAVNMFF
                     EPSTRTHTSFEVAEKKLGVEVVSFDAASSSMTKGETLYDTLLTMQAVGVNVAVIRHSE
                     ENYYAGLEKLDIAIVNGGDGCGEHPSQSLLDLFTIKEQFGTFQGLKVAIAGDIRHSRV
                     ANSNMKVLKRLGAELFFSGPREWFDESYLAYGTYLSVDEIVEKVDVLMLLRVQHERHS
                     GTDEFTKESYHEKFGLTENRAKQLKEDAIIMHPSPVNRDVEIADSLVESEKSRIVTQM
                     TNGVFIRMAILEAILKEQEMRAKLCTY"
     gene            complement(54628..55914)
                     /locus_tag="U0308_000178"
     CDS             complement(54628..55914)
                     /locus_tag="U0308_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HEM2315195.1"
                     /translation="MTETTETVTKPVLDIHERPSFNKWIILSIQHLFTMFGSTIFVPS
                     VTGLSPGVALVSSGLGTLAYLGITRGKIPAYLGSSFTFIAPITALLAAKSGGGPGAVM
                     VGTFSVGVVYAIVSLIVYYAGVDWIQKVLPPIVVGPVIMVIGLSLAPSAAAMAMGTNN
                     GKYSLETLAVAVITLLATIIAMMFFKGFMGLIPILFGFTVGYLTSMAFGMVDYTLIKN
                     ASFFQIPDFSIPFVNIDPVITVTVILSMAPLAFVTMAEHMGHQLLLNRITNKNFFKDP
                     GLHRSLLADGTASIIASFIGGPPVTTYGENIGVLAITKVYSVFVIGGAAVFAILFGFI
                     GYINAVITSVPTAVLGGISLLLFGVIATSGLRMMIENKIDLSVNRNMIIASVVLVVGI
                     GGLFIKAGTFELSGMALAAVIGIILNLVLPAEHRSA"
     gene            complement(56043..56594)
                     /gene="pyrR"
                     /locus_tag="U0308_000179"
     CDS             complement(56043..56594)
                     /gene="pyrR"
                     /locus_tag="U0308_000179"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HEM2315196.1"
                     /translation="MQKQVVVMDEAAIKRALTRVSYEIIERNKGTKNLALVGIKTRGI
                     YLAERLHKRILEIEGIDVPVGDIDITLYRDDLSFKDDKTREPAVHGTNIPFDINGKKV
                     VLVDDVLYTGRTVRAAMDALMDVGRPAQIHLAVLADRGHRELPIRADYVGKNIPTSGN
                     ERVEVRLTDVDNEEDAVIINKNE"
     gene            56826..57056
                     /locus_tag="U0308_000180"
     CDS             56826..57056
                     /locus_tag="U0308_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315197.1"
                     /translation="MAISKAKKKRQKLIREGHLNPEIKRSPFALIDLSSKQTKTKKGY
                     LYSKKRKNHQEDDSFFVYFFKFSHFLHINNLK"
     gene            57144..57968
                     /locus_tag="U0308_000181"
     CDS             57144..57968
                     /locus_tag="U0308_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEM2315198.1"
                     /translation="MGIMNSLLQQKEMVVKDWLTYYVSVDDPYIFTLKNDHRLMDETG
                     FVLENLFIGMTEDLGKMNAFARELGKAQFITSLGISRILFHIRLLEEFLLDYASEIKT
                     KSANYRELYLFSIKLHQVFSSFTQNLIEGYTRANEQKIIQKENQIIKESTKLIWIAEN
                     VFLLPLIGRITDERAKQLTETALVEVCEQPVNYLIIDLSGVQLESPNIGKYIEYFFSS
                     LKLVGVTPIITGMQPQTAKVMVQVNLTEQHGIKTFATLRQATKTLMKEKEARNARK"
     gene            complement(57986..58897)
                     /locus_tag="U0308_000182"
     CDS             complement(57986..58897)
                     /locus_tag="U0308_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEM2315199.1"
                     /translation="MQNETLIIEESHARERVDKVIAEMMGKSRSAIQLMLKNGDITVN
                     GELAKPNYKVQVGDEIHYEVREPEELEVLAEDIPLDIYFEDKDMLVVNKPEGMVVHPS
                     AGHASGTLVNALLFHCDDLSGINGKIRPGIVHRIDKDTSGLLMVAKNDHAHESLAKQL
                     KDKTSDREYIALVHGDIVHQKGTIEAPIGRAKEDRQKMAVVRDGKEARTHFEVLERLP
                     GYTLINCKLDTGRTHQIRVHLKYIGHPLAGDPKYGPKNTIKGNGQFLHAAKLGFDHPT
                     TKERMMFEAPLPSSFEKALKSLRQEEY"
     gene            complement(58897..59361)
                     /gene="lspA"
                     /locus_tag="U0308_000183"
     CDS             complement(58897..59361)
                     /gene="lspA"
                     /locus_tag="U0308_000183"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEM2315200.1"
                     /translation="MYYYLITLAVIALDQLTKWIVVQNMEIGQKIEVIPGFLYWTSYR
                     NDGAAWSILEGHMWFFYLITVVVIGIIIYIMQKYAKGKRLFSISLAFILGGAIGNFID
                     RVLHQEVVDFVQTVWGNYYFPIFNVADAALSVGVVLMLVYVFVDDRKTKGIK"
     gene            complement(59443..60726)
                     /locus_tag="U0308_000184"
     CDS             complement(59443..60726)
                     /locus_tag="U0308_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEM2315201.1"
                     /translation="MQKFFNKVFRLNEHKTNFRTEFLAGMIGFFTVAYIIVVNSSILA
                     EAGVPYQGAVLATIFISALGCLIMGFWANAPLILMPGMGINALFAYTLVQGMGLSWQV
                     ALAAVTMSGLLFMILAFTPLAGKLNEAIPLILKQAITVGLGLFLIFLGLEKGGIVTRG
                     KHAIIAVGDLGDPFVLATLVTLLLTMILVIRKIPGAFLWSLIIGTVVGVMFGVAGKAG
                     GASISVAPWSDVLFKADFSGMASVGFWSAVFTMTMVIVFETVGLTNGQVRQLKQTEKL
                     PRILKASSLTAFLSGLFGTSPTISALESGSMFASGAKTGLATITTGLFFIASLFLMPV
                     LSFIPNSAIAPILIIIGMSMLQEFKEMDLSNAAETFSALLIIVLIPLTYSIADGIAAG
                     FIAYPILRAFTKNEERTSPVMYVIAALFLLQFIIQ"
     gene            60900..62270
                     /locus_tag="U0308_000185"
     CDS             60900..62270
                     /locus_tag="U0308_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM2315202.1"
                     /translation="MQKTVTYGAKWKQFLTIFTPIVITQLTLFSMTFFDTTMSGNYSN
                     QALAGVAIGSSFWAPVNAAFSGLLMAITPIIAQLIGAKKEKQVKNTVHNGLYIALFLA
                     FILILINFLVVPTILTHMPVTAEVAGIARHFLNGICIGIPAFFISAILRSFIDSLGLT
                     RVTMLITLCTVPFNIFLNYCFIFGNFGFPEMGGAGSGYATGITYWLVVLVSVILIQTQ
                     TRLRKFGIFKGLTALRFSKIKEIIGIGVPNGLTILFETSIFSAVTILMGAFGTETIAA
                     HQSANSVCTLLYAFPLSVASTLTILGGYETGAKRLKDAKQYRHIGMAAAIFIGCVNGA
                     ILFFFRDIIAGFYTNDPALSNLIMHFLVYAILFQFADAVLSPVLGALRGYKDVTVTSI
                     VAFISYWLIGLPVGYGLSFTNLGPFGYWIGLSTGLFVAAFILSIRVRKTEQKLSFNTK
                     DAEISS"
     gene            complement(62286..63218)
                     /locus_tag="U0308_000186"
     CDS             complement(62286..63218)
                     /locus_tag="U0308_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEM2315203.1"
                     /translation="MKKIIVVALFALVVVLAGCSSQNSDSKKTDGKLNVVATYSILAD
                     IVKNVGGDKIELHSIVPVGVDPHEYDPLPANIQSAADADLIFYNGLNLETGNGWFDRM
                     LETADKSRDDKEQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALV
                     KADPDNADFYKENAKKYINKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGL
                     KAAYIWEINTESQGTPDQMKQIVGIVEKEKVPNLFVETSVDPRSMESVSKETGVPIFA
                     KIFTDSTAKKGEVGDTYLEMMQYNLDKIHDGLAK"
     gene            complement(63215..64057)
                     /locus_tag="U0308_000187"
     CDS             complement(63215..64057)
                     /locus_tag="U0308_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEM2315204.1"
                     /translation="MLFLEGLMQYSFLQKALITSVTVGIVSGVIGSFIILRGMSLMGD
                     AISHAVLPGVAISYMMGMNFFIGAATFGIAAALGIGFVNQKSRIKNDTAIGIVFSAFF
                     ALGIILISFAKSSTDLYHILFGNVLAVRSSDMWMTIIIAIIVISLVALFYKEFLVSSF
                     DPVMAEAYGLNVKFLHYFLMLLLTLVTVSALQTVGIILVVAMLITPAATAYLLTNKLS
                     KMIVLASTFGAVSAIIGLYFSYIFNLASGAAMVLVATIIFFIAFLFAPKQGLLFSKKR
                     EVIE"
     gene            complement(64061..64783)
                     /locus_tag="U0308_000188"
     CDS             complement(64061..64783)
                     /locus_tag="U0308_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEM2315205.1"
                     /translation="MEIQGLTIAYKQKVAIDNVTLQIASGKLTGIVGPNGAGKSTLLK
                     GMMGLIPREQGQVTLADKPLTYWRKKIAYVPQRSEVDLTFPITVFDMVLLGTYPALGL
                     IKRPGKKEKQLALDALEQVEMTGFMKRQIGELSGGQLQRVFIARALAQHAEIFFLDEP
                     FAGIDMTSEALIMRLLKKLRDNGKTIVVVHHDFHKVAAYFDDIILLNKKLVAHGPVEQ
                     TFTEEKIQFAYGDAPVAFATGV"
     gene            complement(64943..65359)
                     /locus_tag="U0308_000189"
     CDS             complement(64943..65359)
                     /locus_tag="U0308_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2315206.1"
                     /translation="METYLEIETLIKRIFNSFRHEVEAVLDKRLSGSEYRVLSLISSG
                     LTKTSELAKTLDVSASHITAITDTLVEEKFITRHRSEVDRRIIELKLTPNAEEFVKEI
                     DKKKKEMIVKRFAVFSEYEQAEFRKLLKKLADGSIK"
     gene            complement(65396..66886)
                     /locus_tag="U0308_000190"
     CDS             complement(65396..66886)
                     /locus_tag="U0308_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEM2315207.1"
                     /translation="MEESPQNEPNNVEKDEEQKAKPGNGYIKMKLFPFIMLLFAFVFV
                     TALVTTIVMSLGDDKQVKVSIPERKEFTKLYDVYDEITSKYYKDTKSTTMIDGAINGM
                     VNSLDDPYSTFMSKKESSEFNDTISASFEGIGAEIQEKDGAIVIVSPIKNSPAEKAGL
                     RPQDIITQVDGKSVKGDTATEATQKIRGEKGTKVTLTIQRSNEDKPFDVTITRDEIPI
                     ETVYKEMGSDKIAHVTISTFSETTYDELEKALKSLEKDGMKGLVLDLRGNPGGLLDQA
                     VSISSLFVPDGKIVVQEQDKDGDKSAIKADSSSHGDYKVKVPTTMLIDGGSASASEIL
                     AAAAKESGGIKLVGTKSFGKGTVQTATTLSDDSTLKLTVAKWLTPNSEWIHEKGITPD
                     VVVNMPDYATMTIPSSTKVYKNGDFGDDVKTIETLLKALDYNVGKVDGLYDTDTEYAV
                     QRFQAANKLDVTGIMTGVTTDKLVELTQKHLKETDPQLQKAKALVK"
     gene            complement(67041..67247)
                     /gene="copZ"
                     /locus_tag="U0308_000191"
     CDS             complement(67041..67247)
                     /gene="copZ"
                     /locus_tag="U0308_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone CopZ"
                     /protein_id="HEM2315208.1"
                     /translation="MEKLTLNVEGMTCSHCEARVTKALSEVNGVKSAVVSLDEGTATV
                     EFEKGQVTEDALIDAVEEAGYEVA"
     gene            complement(67260..69473)
                     /locus_tag="U0308_000192"
     CDS             complement(67260..69473)
                     /locus_tag="U0308_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEM2315209.1"
                     /translation="MSDKYVRQDLNIFGMTCAACSTRIEKSLNKADGVEKANVNLVTE
                     NAAVYYDPEVTSTEDLIKVVKHAGYDAAEKMSKEEKDAVLEKNFKKEVRRFILSAVLS
                     LPLLLTMVTHIPYIHEMAFAETIGNWINPTIQLVLATIVQFYIGWRFYDGAYKALRGK
                     SANMDVLVALGTSAAYFYSVVEYIRHMIDPSVMPHYYFETSAVLITLILLGKLLESYA
                     TSRTTESIAGLLELQAKEATVIREGKEWLVPVDSLKIGDIILVRPGEKVPMDAEIISG
                     ETSIDEAMITGEPVPVEKKPGDSVIGATINFDGAFQAKITKRMEETVLESIIRLVEEA
                     QGIKAPIQRLADRISGIFVPIVLGIAAVTFIIWYLVTGTVDGSLEAAIAVLVIACPCA
                     LGLATPTAIMAGTGKGAESGILFKGGEHLERTSKVDTIVFDKTGTLTEGKLEVSDKKA
                     ANDHFFPYLFLMEQQSEHPIAKAIIKMLEPENIDASAVKQGKIRAKAGHGMTGNLDDS
                     KVELGAYRYVSSLTTIPKEDDELIESWMHAGKTVVAMAIDGVYAGALALSDTPRPEAK
                     EAIQKLKAQGIKTAICSGDQSVVVENMAKDLGIDMFFAEQLPNDKSALVEKLQQDGHI
                     VAFVGDGINDAPALAASDIGISIGTGTDIAIETGDVTLVSHRLTLIPETIELSKATMR
                     NIRQNFFWALAYNCAGIPIAALGLLAPWVAGLAMAFSSVSVVTNALRLKRYKFKS"
     gene            complement(69488..69781)
                     /gene="csoR"
                     /locus_tag="U0308_000193"
     CDS             complement(69488..69781)
                     /gene="csoR"
                     /locus_tag="U0308_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-sensing transcriptional repressor CsoR"
                     /protein_id="HEM2315210.1"
                     /translation="MKHDQPIVPRKEDETKLLQNRLRRIEGQIRGIAQMVEDDRYCTD
                     ILVQISAANKALKNVGLQVLEHHTAHCVVDAAKNGEDDVMEDLLKAIRQFSKT"
     gene            complement(69905..70729)
                     /locus_tag="U0308_000194"
     CDS             complement(69905..70729)
                     /locus_tag="U0308_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEM2315211.1"
                     /translation="MSSLLTIALAVSISCVHTVEDQYFGGTNADSIAKVEQKSSGNQT
                     LAELEKDPLYPYIDKQNKLTEKDGIKYIENEENMLVLANKDYSLQPTYTPPDLVRPNV
                     TFSFGSQQVEKAQLRKEAATALEEMFVAANKDGKKLFAVSGYRSYKRQQEVFQAEVNA
                     KGDQKAREAVAYPGTSEHQTGLAMDISSENQSYELTEAFGTTPEGKWLQENAHNYGFI
                     LRYMKGREAITKYQYESWHYRYVGKDAATIIYENNWTLEEFFEHVKALQKKVDAAK"
     gene            complement(70787..71488)
                     /gene="deoD"
                     /locus_tag="U0308_000195"
     CDS             complement(70787..71488)
                     /gene="deoD"
                     /locus_tag="U0308_000195"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEM2315212.1"
                     /translation="MSVHIEAKQGEIAETILLPGDPLRAKYIAETFLEDVVLFNQVRG
                     MLGFTGTYKGEKVSVMGTGMGIPSISIYVNELIQSYDVKNLIRVGTMGGIQADVKVRD
                     VVIAQAASTDSQINRNTFAGVDFAPVADFSLLKKAYDAGIEKGLSLKVGNVFSADRFY
                     NDQLDKQQLADYGVLGIEMEAAALYTLAQKYGRRALAILTVSDHIFTGEETSAEERQT
                     TFNDMIVVALEAAIK"
     gene            complement(71500..71733)
                     /locus_tag="U0308_000196"
     CDS             complement(71500..71733)
                     /locus_tag="U0308_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315213.1"
                     /translation="MGRSFYHFLMTYRDPKLTDQKTEFANNAYRDHSFPKQTRNYHIL
                     CDYLEFNAPYLPGMSIFDELWDAYLLDEEKNKH"
     gene            complement(71796..72701)
                     /locus_tag="U0308_000197"
     CDS             complement(71796..72701)
                     /locus_tag="U0308_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2315214.1"
                     /translation="MLKIAVVGLGGIAQKAYLPVFAEMENIEVHLYTRDAQKLKHLSE
                     KYRFDHYHQSIHSMIESGVNAAFVHSSTASHPEVIRTFLANHIPVYVDKPIADNLSEV
                     EELTRLAEEQNTLLMTGFNRRYAPKYQELKALTDTNMIIMQKNRAAQPGEARTFIYDD
                     FIHVIDTVRFLLDAQIEQLHVVPVWQENLLASITVQITAGGKVATAIMNRDSGVNEER
                     LAVMTPSAKYEVENVTETHIYEGTTERFERFGDWETTLYKRGFVSIIQAFLTAVRNGE
                     KAPISKEDALETHRLAEEILRKIEN"
     gene            complement(72784..73221)
                     /gene="msrB"
                     /locus_tag="U0308_000198"
     CDS             complement(72784..73221)
                     /gene="msrB"
                     /locus_tag="U0308_000198"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEM2315215.1"
                     /translation="MDESKKNERLQQLTDIQYNVTQKAGTERPFQNEFYDNEAKGIYV
                     DIVSGKPLFSSNDQYDAGCGWPSFTKPIDEAEVIEHRDLTHGMIRTEVKSADADSHLG
                     HVFPDGPQDKGGLRYCINSAALRFIPVDKLEEEGYQAYKKIFE"
     gene            complement(73228..73761)
                     /gene="msrA"
                     /locus_tag="U0308_000199"
     CDS             complement(73228..73761)
                     /gene="msrA"
                     /locus_tag="U0308_000199"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEM2315216.1"
                     /translation="MTKESLEKATFAGGCFWCMVKPFDTQPGIEKVISGYTGGHTVNP
                     TYKEVCSGTTGHTEAIQITFDPAVFPYEKLVEVYWQQTDPTDAAGQFLDRGDSYRPVI
                     FYHNEEQKEIAEKSKAALDASGRFKKPIVTEIAKAETFYPAEEYHQDFYKKEKAHYEG
                     YQVASGRAAFIDANWKG"
     gene            complement(73797..74411)
                     /locus_tag="U0308_000200"
     CDS             complement(73797..74411)
                     /locus_tag="U0308_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpmS family protein"
                     /protein_id="HEM2315217.1"
                     /translation="MQRETRSAPKKPKRNYWKWVCITLISVLLISAGWIYVAVFKLSP
                     QDEPTPSLISNKSMVEFQTSTTKADLNQLISSYIEDFSKDQDIGYKVFVANNVNFTAE
                     AEIFGEPVELRLKFSPEVVDNGNVELTLKDMSVGALPLPVSYVMNYVSKNYKFPDWVT
                     IMPKKEKIYLSLDKLKLQGGTKVRADTLNLKKDDISFTLLVPVK"
     gene            complement(74427..75212)
                     /locus_tag="U0308_000201"
     CDS             complement(74427..75212)
                     /locus_tag="U0308_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEM2315218.1"
                     /translation="MTKKKWLWLTGSVLVIALLVGAVFGIKYYKESKEIPINLVAMGD
                     SLTEGVGDENKGGGYVGIIPKELEEESNIPSVKTSNYGVSGNKITQLEKRLKTNKDFQ
                     EDVKNANVITITIGGNDVMAILQSRLLNVNVDDFTKANKEFQQELETLLKDIRSYNKD
                     AAIFLMGIYNPYTTYFSDIKQFDEIISDWNKASKKTIQQDSNAYFVPIAKVLEDRNAD
                     NKDKPNSLLSDDYFHPNHRGYEKMTSELDKAIVKQLNEGNIPK"
     gene            complement(75227..76066)
                     /locus_tag="U0308_000202"
     CDS             complement(75227..76066)
                     /locus_tag="U0308_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEM2315219.1"
                     /translation="MRKIKIITDSTAGLTLEEAAKWNIDVLYLTVEIDGQIYNPKTDI
                     TPEEFMVRMAETKELPKSSQPAIGSFVEAYEKYTAEGYEILSIHLTEKLSGTVNAARQ
                     AADMVEGNITVVDCDYTARGQAFQVLKAAEMAQSGDYSVEEIHAKINDIRDKTKLYIV
                     VVTLDNLIKGGRVGRMQGFFGSLLNIKLIAKLTDGQLEEETKVRSNKKVLQYCLNLIK
                     DEPKKIQHLDVVHADGLNLADDFIAESKEITGLTEIPLFFADPVISTHAGTGAFAFMY
                     YTD"
     gene            76245..76877
                     /locus_tag="U0308_000203"
     CDS             76245..76877
                     /locus_tag="U0308_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEM2315220.1"
                     /translation="MNVTSYNWKEEVANAITHGIGFILSIPALVLLIIFAAGKDNPLY
                     LTSFLIYGISLMLLYICSTLLHSFKPCKARTVFNIMDHAAIYVLIAGSYTPFVLITIQ
                     GTLGWTLFGVIWGLAIAGIIYKIFMTGKLKLLSTSVYLLMGWMVMFAIKPLYAGLTPT
                     GFWLLATGGIMFTVGAVFYSIPRVPYMHAIWHLFVIAGTAFMYFCILFYV"
     gene            76999..77616
                     /locus_tag="U0308_000204"
     CDS             76999..77616
                     /locus_tag="U0308_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2315221.1"
                     /translation="MIPIELSPRQHQIVAYVRANEPATGDSIAAHLKLTRATIRADLS
                     ILTMTGILDARPKVGYFYSGLETNPIHFDEIRQLKVADIMTQPFFAKKETSVYDAIVM
                     LFMEDIGSLYVVDEDLLVGLVSRKDLLKGALADADTKATPIATIMTRMPNLVTVTKND
                     TVLHAAEQLVFHQIDSLPVLENTKVVGKISKTRITALFVDTIKKV"
     gene            77629..78441
                     /locus_tag="U0308_000205"
     CDS             77629..78441
                     /locus_tag="U0308_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HEM2315222.1"
                     /translation="MENPVIIYVISDAIGETAQHIIRAVTAQFSLNKPADIRRHAFIR
                     DESALLETLEEAKAADGIVVQTLVQAKLAEYATNFCVQNNIPNVDLLHTLTAAVEAKT
                     GLKSKQDPGNMRRLDSNYFDRIAAIEFAVKYDDCKDPRGLLDADIVLVGVSRTSKTPL
                     SSFLANQNWKVANVPLVPEIPIPAELFQIPAERIIGLTTTPEKLAQIRKVRLKSIGLD
                     EASSYSSEKRILEELEYGYDTFKKLGCQVIHVEDKAIEETAALITEIITSYH"
     gene            78460..81099
                     /gene="ppdK"
                     /locus_tag="U0308_000206"
     CDS             78460..81099
                     /gene="ppdK"
                     /locus_tag="U0308_000206"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HEM2315223.1"
                     /translation="MRKFVYQFSEGSKEMKNILGGKGANLAEMTNIGLPVPPGFIIST
                     DACNDYTANNKHLSEAIFEEVKIHLAELEKQTGKIFGFAENPLLVSVRSGAPFSMPGM
                     MDTVLNLGLNDQAAEGLANLTGDARSAYDSYRRFIQMFGDVVFEIPSYQFEQALSRIK
                     KANNYRLDTELTATDLSNLIDAYKLIFSQATGIDFPQDPLEQLRLAIIAVFDSWMNPR
                     AVIYRRLHDIDASFGTAVNIQAMVFGNTGETSGTGITFTRNPSTGEKKVFGEFLLNAQ
                     GEDVVAGIRTPEPISALEERMPTVYKELLQTCELLENHYLDMQDIEFTIEKGKLYVLQ
                     TRSGKRTAKAAIQAAIDFVHEGKITRQEAIMRVETKQLNQLLHPTFLESALKNGQVIA
                     TGLPASPGAATGQIFFEAKEAVQAAERGIPVILVRNETSPEDIEGMARSNAILTAHGG
                     MTSHAAVVARGMGKCCIAGCAELTINEKDKTIILPTGDTLHEGDALSLDGSSGKVYLG
                     EIALREAKIGGYFDELMAWADAEKRLMIRVNADTPADFKKALLFGAEGIGLCRTEHMF
                     FDEKRIPYVRQMILAESLNERESVLAILKEMQKADFNELFRIADGRSVNIRLLDPPLH
                     EFLPTMKQEIEQLAGAMNRTVPQITNRINGLREANPMLGHRGCRLAITFPEIYRMQAE
                     AIIESAIIVHNEGIDVHPEIMIPLIATKNELSYIKKELQQAVQAIFDREQVLIPYDIG
                     TMIEIPRACVTAAEIAEEAAFFSFGTNDLTQLTYGFSRDDATKFLADYYEKDILPKDP
                     FVSIDKNGVGALVEMAVTRGRMTSEHLKMGVCGEHGGDPESIQFFHQLGLSYVSCSPY
                     RVPIARLAAAQAALAEKQLVPTI"
     gene            complement(81149..81526)
                     /locus_tag="U0308_000207"
     CDS             complement(81149..81526)
                     /locus_tag="U0308_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2315224.1"
                     /translation="MVEKIGQVMLYVENQAAVRDFWVEKLDFVVVSEEVVNGEIQWIE
                     IAPTKGVETTFVLQNKKKVAEMNPEMNLGTPSILLFGNNVAELYEEYKDKGITVGDLV
                     DLPMGRVFNFSDNEGNYFAICEK"
     gene            complement(81530..82513)
                     /locus_tag="U0308_000208"
     CDS             complement(81530..82513)
                     /locus_tag="U0308_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HEM2315225.1"
                     /translation="MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTK
                     KGSLQLAIQRVYSTVLALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLHVADGIVVS
                     SVLVSHILLEQSLSFFWFKNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMR
                     QILTEMTQGLRNQSEYHDEFGLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDM
                     RLVQYRILTQMKRHLVAFDHSSEQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHE
                     FRSSKLPETRAEFENRAILFQFMNDLRYLLEMKRDFYAEFGLKEKEMTRGR"
     gene            complement(82607..83230)
                     /locus_tag="U0308_000209"
     CDS             complement(82607..83230)
                     /locus_tag="U0308_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEM2315226.1"
                     /translation="METWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTT
                     VTSLNVVMVIIVATLGSVVGAILLYKVASYFGKERLTKIVLKYGRILRLKESDIERAE
                     SFFLKYGSWAVFLCRMIPLIRSLISIPAGMTKMKMSRFLILTTAGSLLWNTVLIGLGA
                     VLGESWNEIVVFMDSFSTIIYSVIAILVVVGLGFFFRARFKKTLDEE"
     gene            complement(83367..84719)
                     /locus_tag="U0308_000210"
     CDS             complement(83367..84719)
                     /locus_tag="U0308_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEM2315227.1"
                     /translation="MKKLRIFTLMLAFALFLLGGGIVAQAAEEAPIDEKIVGETVTND
                     GEEFIVDEISDLEDVNSTTGTLDTSDEVEVDLSGLTIENEEAVLTPGLKTIFGGDGRK
                     LVTNTTQYPYSTSAYLVMEFPNGKTYIGSGQLIGEDSVLTAAHCLYGKKDGGWAKKVT
                     VYPGYNGTKAPFGTAKARKMYVPKEWTKKEPSTEDYGVIKLDKNIGTKTGTMGLTTNT
                     SGAITISGYHGDKKGKLYTQTGNISQVTANNVFYRLDTTGGSSGSGVYNSKKQILAVN
                     AYEYLNGTGDNFGTRITKEKLNNIYTWAFDNNLSVSKQKGINYELHVQSKGWMGNVAN
                     SMTSGTVGLGLRAEAMKISLSGMPYSGDIQYRSHVQGSGWQGWLKNGEISGTRGQSKR
                     LEAFQVKLTGNIAKNYSVQYRAHVQNKGWQSWVKDGATAGTTGESLRIEAVQMRLVAK
                     "
BASE COUNT        22985 a        18408 c        15348 g        28079 t
ORIGIN      
        1 tttatttgca atttttctca ataagtataa gaagtaaacc actgccgcaa caatagctat
       61 cttgaaacta catatatgaa accccaaaaa tcagctgctc ccatattaca cctcactctc
      121 cacagtattt ataactatgt actattcttg cctgtttttt ctttttgtct aatgaagtta
      181 actttcttgt acttcttaat tcaaagtatc tttttgaacc atacgcttgt atagtatacc
      241 atcccggacc atgtaagtca tacccaactt tccgcgcata tttatctgtc gttttggttt
      301 tggcggactc tactttctat gccgcagtat cccaagcccc acctttgaag tgtaacgcat
      361 aatttgacaa aacgattttc cctattggaa cacccccact tttgtaagta aaaacgaaag
      421 gtgaaaattt cacattttag cattctaatt ccaagcaaaa caaaaaccct tgatttctca
      481 agggtttcag ccgttaaatg attaacgaat ttctttaata cgagccgctt taccacgtag
      541 gttacgtagg tagtaaagtt tcgcacgacg tactttacca cgacgaataa cttctaattt
      601 tgcgatacgt ggagtatgta ctgggaaagt acgttccacg ccaacactgt tagaaatttt
      661 acgaacagtg aaagtttcgc tgattccagc tccgcgacgt ttgattacaa cgccttcgaa
      721 taattggata cgttcgcgag taccttcgac tactttcgca tgtacacgta cagtatcacc
      781 cggacggaaa tttggaacat ctgggtttag ttgacttttt gtgatttcat caatcagttt
      841 gttcatgttt ttctctcctt ccaacaaaca ttcattcata ttaataatga agcggaatat
      901 cgttatcaga ctggtctctc cagtcacctt atttaggtta ccataaacta gtttcgctgt
      961 aaagtttttt tcttactttt tcttttgata aaaaagcttg accttggagt atggtttaat
     1021 gttaccttta gtatatcaaa tggaggtgtc agagatggaa caatggacag taaaagaaat
     1081 ggctgcttat gtaggtattt cagcggatac attacgatat tatgaaaaaa acaagataat
     1141 tgtacctaat cggctggaaa acgggtatcg tgtgtataac acggaacatc tattagaatt
     1201 aaagtttatt ttagtaatga aatatgcccg attttctctt tctgaaataa aattgatgat
     1261 ggaatggttg agaagcgagc cttctgtcgc ttgtaatacg gcatcaaaag agttacttgc
     1321 gcttaaagca gcggaaatca aacagacgat tgcacactat acaaaaatcg ctgctctttt
     1381 agaagaattg ccgcaaattg acgaggtcca agattacagc actgttcaaa aagatgttaa
     1441 cacttttgtg gagcatattt ttactgacat cagaaaggac gggttctaat ggctaagatt
     1501 gtggcgatta ttggtgaccc acgggaaaaa ggtacatcaa gagatttgtt tcagaagtat
     1561 ttagctgttt ttcaggaaca accaacaatc gaggtaaaaa tctatgatat ccgcaaatta
     1621 gcttttgacc ctaatttacc tgaaggctat cgtacggagc aaacccctga cataattgcg
     1681 cttaaaaatg atgttcgttc cgctgattta cttctatttt cttatccggt ttggtggttt
     1741 aacgttccgg ctgtgttaaa aggtgttatt gatcatttgt tttggcctgg ggagagctat
     1801 agttttaaag ataaaaaata ttttcttact ggaccttggc gaaaaaaacg agcgcggttg
     1861 atttatacga ttggcggaat ggaaatacaa catcgacttt tcgcccgccc tgctcttact
     1921 gccttgcgtt acccattatg gatgagtggc gtgttttcgg tgaaagtgac ttcaattgat
     1981 cgactggatc tttctatcag aaggactgat gactactatg ataaaaaagt tacacgtgca
     2041 gcaaaacgcg atattcaatt cttgctaaaa aagcaaatta gaaagaaggt ttttgcatga
     2101 aaattactgc caaacatcaa tattggcaaa ttacgacatt gccgtatctt tttccggtga
     2161 attgttactt aattttagaa aaagacggct taacattgat tgatactggg attttgtcga
     2221 acgcgaaagg aatcattgca ctcatccaca aattaaattt acctttaaaa cggattttat
     2281 taacgcatgc gcatggtgac catattggcg gtttagtcgc agtgaaagca gcttttccag
     2341 aagcgcttgt aatgattgga agcagagaaa aattgcttgt agaaacgaaa gaaatttatg
     2401 cttttgaagc acagaagccg ttaaaaggcg gttattcaga tcaacttcca gtaagcattg
     2461 atcacatttt aaaagatggt gatatgattg gctccctgtt aattatcgat acgccgggac
     2521 atacacctgg ctccatttcc ttttttgatg agcgtaatgg gcatttattt gtaggagatt
     2581 tatttcaaac tcgtggagga gcggctattt gtggggagaa gcgatggttg ttcccttttc
     2641 cagcgatggg ttcttgggat cttccaacaa gtatcgcatc ggcggaaaat ttacagcttt
     2701 tcgatgtgac ggaaattgct tgtgggcatg gaccggtgaa agcgatggct gattttgact
     2761 taacgaatgt actaaagcga gcaaagaaac aagcaacaaa tgaaaaagac tagaaaacca
     2821 attactggct ttctagtctt tttttagaat ctcgtaattt tgatgtttac ggctgttcca
     2881 tatgcgagtt gataaacgag gccatcgacg aattgctcgg taaacgaaca gtgaattaag
     2941 ccattcccgc ctgcatctaa tgctttcttt tgtaattcct gtagtaaatt ttcaaagccc
     3001 actgtttcta agtatgcttc tggatcactt ttgattcttg ggcggacact tttggcgaaa
     3061 acaaccgtga ggatatcatg attcacatta atcggtccag tggaaacttg tatgtcttgc
     3121 catctttgcc caattcgctt ttggtcattt tcttcttgta cataggcttc tcgttctttt
     3181 tgacgctcgg attttttggt ttctttttca tcaggtgttc caaaaattgc catttaaaat
     3241 cacgtccttt gattatttac tgtcagacca ttctttgagc caagtttttt gcttgtctgt
     3301 taagggatag tttttaagta aatctgggcg gcgttcgtag gttcttttga gcgattcttt
     3361 gtcgcgccat tcttctatcc atgcatgatt tccgctgagt aaaatatctg gcactttcat
     3421 tcctctaaaa tcggctggtc gcgtgtagtg tggatgttca agcaaaccgg tcgagaaaga
     3481 atctgtcaca gcggaatctt tattaccaag tactcccggt aaaagtcgga taacactgtc
     3541 cattacaatc attgcaccaa tttcgccacc agttaaaatg taatctccaa tcgacacttc
     3601 atccgtaaca aggtgttcgc gaattcgttc gtcgtaacct tcatagtgac cgcaaataaa
     3661 aacaagatgc tcttcttcgg caaattcttc tgccattttt tggtcgaagc gtttgcctgc
     3721 tgggtccatt aaaataactc ttggctttgt ttctggttgt ttctctttga cagcttgaac
     3781 ggcatcaaat atcggttgcg ctttgagtaa catacctgcc ccgccaccat aagggtaatc
     3841 atcgacaata tgatgctttc cttctgcata ttccctgaaa tcagtcactt caaccgcgac
     3901 acgctcattt tcgatggctt tttttataat ggaatttccg gtcactcccg aaaacatatc
     3961 tgggaaaatg gatagaatgt caattttcat taatctagca gtccttccat gacttcgatt
     4021 gtaatttttt tgtcattaat attgatttct tttacaacgt cggcaatata aggaattagt
     4081 ttttcttttt tgtcgctgcc ttttacaacc catacatcat tggcgcctgg tgttagaatt
     4141 tctgtgattt cgccaagctc ttcgccgtca gtagttacaa cgatacaacc gatgatttca
     4201 tgaaaataaa attcgttttc ctctaaatca gttagttgcg cttctttgat tttaagtacg
     4261 ccttctttca tacgttccac ttgatgaatt ccagtgaatc cttcaaacat cagcaaatca
     4321 aagttcttat gtttgcggtg tgagcgaatg attagttttt caggcttttt gctgtttttt
     4381 tcaaataagt acacggtatt cccaacttgg aaccgttctt ctggaaaatc ggtcgttgcg
     4441 ataactcgaa tttcaccgat taagccatga gtattaacaa tttttcctac attatacatt
     4501 ttctccataa gtcacctcta gcgtatttct actatgattc catcttttac aacaatggtt
     4561 ttatcaaaaa tggatttatc ccacttgtct cctacttgta catcaataat cgtttccatt
     4621 tctcgttcgc gaatttcact gccaagttcg aggacttcta attgttccat ttgaaactga
     4681 attagttttt tcttttctcg gcgcaggtcg agttcgtggg taaagtaatc ggccactcgt
     4741 tctggttgaa atttgctttt tcgttccatt ttcttttgtt caaaatgcaa ctgatcgcat
     4801 tcttgttcga tttgtcgttt ttgctcggta taatactcga ttaattcttg tttacttgct
     4861 tcggttagaa tttgtttgac gacaactttt tggatgattt ccactggaca cctccactag
     4921 cgattatgtc cttattttac catagttttt ttggattcat ctactaatgc ccggaataat
     4981 tgttcacttt ccggatctgt ttggaacatt aattctgggt gccactgaac acctaaatac
     5041 caacttggca aattgtcacc ttctacagct tcaatcattc catccgcagt acgcgctgtt
     5101 actttaaaac ttggcgctaa ttttttgata aattggtgat gcaatgaatt gactaatttt
     5161 ttattcgggt gatgctttgc gagttcactt gtcggttcaa tatcaattgt atgagagccg
     5221 agttgttcat cgacgcgctg caaatgttgg agggctttcg tttcgacttg gctgatatct
     5281 tgataaagtg agccgcctaa cgccacatta actagttgca tcccgcggca aatagcaaaa
     5341 atcggttttc cagcgtctaa tgctgctcga actaaggcga tttcatagct gtcccgaggt
     5401 ggaaaataag cgccgatttc ttgggacggc tcttctaaat aaaattgtgg cgtaatgtct
     5461 tgtccaccgg ttaaaagcaa accatctacg agagaaattg cttgaacggc aacagacggg
     5521 tcatctattg gcaaagcgat aggaaatccg ccaacttttt gaatagcatc tacatatcgc
     5581 tgttgcgtat aagtcacacg gtgtccgtaa aaaacgtcca caccttttac taatctattt
     5641 ccggtaattc caataactgg cttcatcaca attcctccat ttctattcta ttttacaaca
     5701 tttagtgagg taattgcttc tctgatgatt atttaaaaat agttataaaa aaactcgcca
     5761 aattgacgag tttttgttat tcgataattt caagacgaat cttcttatcg tttttggagc
     5821 caactgcgta gacaagcgta cgaatcgctt tcgcaatacg accttgctta ccaatcacgc
     5881 gtcccatgtc ttctttactg acagacaatt tgtaggttaa cgatgtatcc gtttcttctg
     5941 gcgtgataac aacgtcttcc gggtggtcaa caagaggttt cacgattgag agaatgagtt
     6001 cttccattcg cgccgagacc tccttattta cctaattttt ggttatggaa tttttccatg
     6061 ataccttcgc ggctaagaag attgcgaact gtatcagatg gtttcgcacc attatgcatc
     6121 catttcaaag ttgcttcttc gtcgattttc acttcaaccg gatcaagtaa tggattataa
     6181 gtaccaatag tttcgattga acggccatca cgtgggaaac gagaatcagc gactacaata
     6241 cggtagaaag gtttcttttt agaaccaata cgttttaaac gaattttaac tgccatagtt
     6301 taattacacc tccataaagt cttacacaag tatatatatt accagtaaag gatttgtttg
     6361 taaagtgttt tttctttaca gagggaattt ttttcttttt atttgacggt ttcggcttca
     6421 gcacttagtt tcccttgttt tagaaggtgg tggtaacgca catatcctga aatattatgc
     6481 tccacatcat caattctaac ccggaaagac tggtggcgaa tgaagaaact gccatctatt
     6541 cgcgctggat ttttgtagta gattgctagc tctgggtaaa aatagccatt taactggtag
     6601 atagctcgtt tagtgattgt tttttccaat tcagctagtg gatagtcatg aagcagtttt
     6661 tgcaagtcct ctgtttccat ccgtagcgac atctcttttg tagcaacagt aagctctaaa
     6721 aaggttggaa atgtggtttc gcgtccataa ataaatggta ggttgtcgaa agcatttttc
     6781 attccaaatt cgtagtaagc ttcgtctgga atatatttag tgatttcatt ggcgcagtag
     6841 ctcagccagt gatcatggtt ttgccagtag tcatcacgaa tgaaatggtc aaaagatttt
     6901 gccgctgcct ccagccattt ggaatcacgg tcaatttcat ataagcgcaa caagccaaac
     6961 acagcttccc cgtcgtaata aataatccgg aaaatatctt ttacttctaa agagggatac
     7021 tccaacacat gcgtgaactt cccgttttct tcttgtaagg aaataatcgc attcgcaatc
     7081 ttcctagata gtggcaaata ggttttagtt ccagtgattt tcatatattt cgttaaagca
     7141 agcaatgtcg ccgctgaacc gcctaattta acttcacgca accctggttc aattaaaaaa
     7201 gctaattcgt ctttttcata aataaagttt tgctctaaat aagttaaagt gcttgtagct
     7261 gcttccaaaa ttgttttatc gcctgttaat tcgtatgctt ctaacatcga ataagttgta
     7321 ctcgcgtggc gcaaactatt atagtgttta atttttttat caaagcaagc aaaccagccg
     7381 taattgaatt cgcccgtttg atttacttgg ctcactaaat aatttccagc gtttccaact
     7441 agttcaaaaa ctgcatctgg agttaattgt ttagtacttc tacgaccatg ctcaagctcg
     7501 cttggttcta actcatggat tttctttccg tcaaaaaacc atcctactgt attaaaagta
     7561 acaatagtgg aatctacggt taagtttaat tgagcttgat ttttatttgt ttggattaaa
     7621 tatctattca tattttcaac gttgatagct aaaccttcat cacctggtag aaggatagcg
     7681 ttcgcattaa tttcttgttc cattaaagct attttaaaat tttcatttaa ggcaatgcct
     7741 cttctataat aatttttctt cgtttttaaa gcttttttat tccattctcc taaattttca
     7801 agtcgataat ccacagcaac atcaatttta aaagaaattg cctcttcggt ttggtttttt
     7861 attgcacttt ttttcatttc attaattaag ttggctaggc aaagatagct aaagtttatg
     7921 acaatagctc gtttattttt atagccgatt gttagaaagc catgccattt cccgttgtaa
     7981 gtggcgtgtt cttcgtcttc tgttaattga tcaataattt tattttcaag ttcatctaat
     8041 atacctctcc aaggcatatg taccactcct ttttataata tccctgccgc taaattttct
     8101 tagcgacagg gaatcgttgt attgtggctc ttatttacgg aaaagacgta gtaaaaacgc
     8161 gccagctagc gagaagagac caagcccaac ccacggaaga ctactgtttg tatctccagt
     8221 tgaaggaaga tcacttgctg agatagaagt tgttccatcc gcgctataac ctgaggaaag
     8281 cattgttcct gaaccatttg aactcatgtt cgtaacggtt acgccagttc ctccgttaga
     8341 agttccagta gttcctccat tggtagaagg atttgatcca ccatccgcat cggcatcagc
     8401 atcggcatcg gcatccgcat cggcatcagc atccgcatcc gcatccgcat ccgcatcagc
     8461 gtcggcatcc gcatcagcgt cggcatccgc atcagcgtcg gcatcagaat ctgctaatgg
     8521 taggacagtt acggctacat cttcactcgt tttaacttca ttaccatatt tagctgttac
     8581 ttgaagatga ataacatctc cagctttcaa attataatta ggaatattaa tagtataggt
     8641 tccatctgca tggattaaga catttccgat aacagtaccg tccggaagag tcaaattaat
     8701 atagaaagtt gttccagccg gtgcatctga ttgcaatgat ttcagaaggg tatttatatt
     8761 catattttta taaatggaag tacctgaaat tgttttagtt ccttcgtaaa ttggatttac
     8821 agttggtttt tcaactagga aatctctcca gtcaatgtct acgtcggcat cggcatccgc
     8881 atcggcatcg gcgtcagcat ccgcatccgc atcggcatcg gcgtccgcat ccgcatcggc
     8941 gtcggcatcc gcatcggcgt cagcatcagc gtcagcatcc gcatcggcat cggcgtccgc
     9001 atccgcatcc gcatcagcat cagcatcagc gtcggcatca gcgtccgcat cagcgtcggc
     9061 atccgcatca gcgtcggcat ccgcatcagc gtcagcatca gcgtcggcat ccgcatcagc
     9121 gtcagcatca gcgtcggcat ccgcatcagc gtccgcatcc gcatcggcat ccgcatcagc
     9181 gtcggcatcc gcatcagcgt ccgcatcagc gtcggcatcc gcatcagcat cagcatcagc
     9241 atcagcatca gcgtcggcat cagcatcagc gtcggcatcc gcatcagcgt ccgcatccgc
     9301 atcggcgtca gcatccgcat cagcgtcagc atcggcgtca gcatccgcat ccgcatcagc
     9361 gtcggcatcc gcatcagcat cagcatcagc gtccgcatca gcgtcggcat ccgcatcagc
     9421 gtcggcgtca gcgtcagcat cagcatcagc atccgcatca gcgtcagcgt cagcatcggc
     9481 gtcagcatca gcgtcggcat ccgcatcagc gtccgcatca gcgtcggcgt ccgcatcagc
     9541 gtcggcatcc gcatcagcgt cggcatcagc gtcggcatcc gcatcagcat ccgcatcagc
     9601 gtcggcatca gcgtcggcat ccgcatcagc atcagcatca gcatcagcgt cagcatcagc
     9661 gtcggcgtca gcatcagcat cggcgtcagc atcggcgtca gcgtcagcat cagcatcagc
     9721 atcagcgtca gcatcagcgt cggcgtcggc gtcagcatcc gcatcggcgt cagcatcggc
     9781 gtcagcgtca gcatccgcat cggcgtcagc atcggcgtca gcatcagcgt cggcgtcggc
     9841 atccgcatcc gcatccgcat cagcgtcggc atcagcatca gcgtcagcat ccgcatccgc
     9901 atccgcatcg gcgtcggcat cagcgtcagc atcggcgtca gcatccgcat cggcgtcggc
     9961 atcagcgtcg gcatccgcat cagcgtcagc atcggcgtca gcgtcggcat ccccaacatc
    10021 cgtagtaata aacccacgag ccgcattact attcaacaga tcaacatcca aaagcccatc
    10081 accagttcta gcagcaaaat ctaattttcc atcattggca ctaggtagcg cagttacgcc
    10141 aagcgctagc aaatcaattg tcaaagtgaa agtagatata ctaccaactc caactcccag
    10201 taagtgattt acttttgcac caaccgcatt tctactagaa tcaataaaga aattgcttga
    10261 gttacttcca tttactgtac cttgattaaa taatccaata ccgccaattc ctaaataagc
    10321 aattttataa tcaattttcg tatttgctct tatatttgga ttacttaaaa tagaagaaag
    10381 ttcacttggt agttcaaagt atggatagta cgtggatact gcactagcac taactaactg
    10441 attcccagaa agagtaatca ctaatttccc attagaatac tgtgtattca aattagaatt
    10501 tcctaataaa tcaattgttg ccgcatccgc ttgaatacca cttagggcaa attggtgatt
    10561 aaaagaatcg taattcacag tgacaggcgc taccatcatc gttgttgtcg taataagcgc
    10621 cgcaattaat tttgcttttt gcgctcgctt ttggtctaat ctccgtttgt aatctacacg
    10681 ctgttttttc atcatttttc ccccttaaaa atcaatcgtt cttgattttg aaaaataact
    10741 gaaaacagaa taaaggtatt aaattatgtt ttcctaataa gctaactatt aagtatcccc
    10801 tgaaccttta tccaatatca gattccaacc atttcagccc aatgtccctc ccttcgtttt
    10861 cggacctaac attagctgtt ataacccgtt agataacttt actatatagt atatttttaa
    10921 aaattaaagt aaaaagtact agaaccaaaa aatacttcaa ttcgattctt ttagtctaaa
    10981 agttatacaa atatacgtat ttatagcctg tatttaaact ttagcactgt tcctaatagg
    11041 gtattaagac ctatagcagt taacattaca cgaattgtct ttcaattgta tacaaatctt
    11101 tttaaaatgg ttcttcactt cagattctat ttgtacgcaa aaaaaaagcc ctttttcaag
    11161 ggcttacttt tttaataaag ataggctttt tttagttgtt cttttttagc atcggttagt
    11221 ccgagttttt cttttaaaaa gttgtccatc gaaccatatt ttgcatcaat ttcatcaaag
    11281 gctgcattga tataagattc acgaacttcc attacggctg tcattccatc aatcactttt
    11341 ttattatctg tttttgctgc aacggcttca attgcttttt tattttcgag ggcacgatat
    11401 ttattggaaa gcatataatc gttaatgact gtgtttttat ccactcctaa tgctgacaga
    11461 acgagggcgg ttccaaatcc agcacgatct tttccagctg tacagtgcca aagaacagat
    11521 ccatcttggt ttgctaatag tatatcaaaa aaatctttat aggcttgtat cgaagtttca
    11581 tctgtaataa agctcttatt ggcattaatg agaaatgttt ctggattatc cattttggct
    11641 aggctggcag ttaaatcttg tgtgcttgta gatgcaccat tatctttcat cacagaatcg
    11701 tgcgtatagt caacatctgt gagttttggg tctggtttgg ctgcgacttc tgaacttgtt
    11761 cggaaatcaa ctatatgaga caaatcgtat gtatttacga gtttcttttt atccgaatca
    11821 cttaagttag cgagttcggc acttctaatg agtttatgtg gcttgatagt tagtccatcc
    11881 gttgttttgt atccgcctaa gtcccggaca tttacagcac cttctaattt aatttggctt
    11941 cctggtttga ctgtttgctc ggttttaacg tttgcctccg ctttttcttc tgactgcgct
    12001 ccgcatcctc ctaatagtaa agtcgcgctt agcacccctg cccctgttac ttttacccaa
    12061 tgtttcattc tttctcctcc ttttgtaagc ttcttgtaca ttatagcaac gcaatttgtt
    12121 ggttgaatga agggtttgta aagaaatgat tttagggatg ttaaggtatg aaaaaaagcc
    12181 aaaacccgga atgggttttg acttttagaa ttaaaatggc attttgaaat tgccgaatgg
    12241 atttttgcct tttttgcctt tgccgccacc agtcatttgc ttcatcattt ttttcatttc
    12301 accaaattgt tttaggagac ggttaatttc ttgaaccgga cgtccgctac cacgtgcaat
    12361 ccgttttctt ctacttgcat tgatgatatc tggattgtct ttttcatttt tggtcattga
    12421 cttgataatt gcttcaatat gacctagttg tttatcatcg acgttcatgt tgtcgaggcc
    12481 tttcattttg tttgcctctg gcatcatttt aagtagttca tctagtggtc ccatttgttt
    12541 tacttgttgt aactgttcta agaagtcatc tagcgtcatg ctgttgtctt tcattttttg
    12601 ttccatagct ttcatttttt ctgtatctac atcggtttgc gctttttcaa tcagggaaag
    12661 cacatcgccc atgccgagaa ttctggaagc catacgatct ggatggaaag tttctagagc
    12721 ttccattttt tcaccagtcg cgataaattt aattggtttg ccagtgacgg aacgaatcga
    12781 aagcgctgca ccaccacgtg tatcaccgtc taatttggtt agcacgacac ctgtaatttc
    12841 taattgttcg ttgaagcttt gcgccacgtt gacagcatct tgcccagtca tggaatcgac
    12901 aacaagcagg atttcggttg gcgttgcaat ttctttcact tgttttaact catccattag
    12961 cgtttcgtca atatgaagac gacccgctgt atcgataata acataatcta aatgttcttc
    13021 ttttgcttta gcaatagctt gtttggcgat ttctaccggg cttacttggt ctcctagaga
    13081 aaataccggc atatctaatt gcttgccaag tgtttctaat tgtttgattg cggcaggtcg
    13141 gtaaatatct gctgcgacaa gtaatggttt gcggttatat tttttgcgta ataaattagc
    13201 aagtttgccg gaagtcgttg ttttaccagc cccttgtaaa cctaccatca taatcacggt
    13261 tggtgggcgg tccgctgttc cgattttgct ttcttctccg cccattaagc ttgttagttc
    13321 ttcttgaacg attttgataa cttgttggcc gggtgttagg cttttcataa cgtccgcgcc
    13381 gacagcacgt tcgcttactg ttttaataaa ttgtttaacg actttaaagt taacatcggc
    13441 ttcaagtaga gcaagacgaa cttcacgcat catttctttt acgtcagctt cgtttacttt
    13501 ccctttgccg cgaattttgt tcattgtttc ttggagtctt ccagctagtc cttcaaatgc
    13561 catgattctg gcctcctaat cgatattttt aagctgttcg agcgtatctt tcacttgctc
    13621 gtccagaaaa ttcttcttgg ttaattgtgc ttctaattga ctaaaaagtt tttctcgttg
    13681 ttggtatttt tttagcatcc ctagtttttc ttcgtatttt tctaggcttt cttcggttct
    13741 tttaatatta tcataaatgg cttgtctact cacttcaaat tcttcagcaa tttcgcctag
    13801 cgagtaatca tctagataat aaaaagaaac ataggctttt tgttttgttg ttagtaattc
    13861 ctggtaaaaa tcaaataata aattcatacg gtttgtcttc tcaaacaagg catttcacct
    13921 ctctcctttt aaaggatacg gggaaatcgc gggaatgtca aggaaggtta aacaaaagag
    13981 aaaaaagcca gaatgacgag aatcattcgg ctttctctga ttatttttcg ttatcaacca
    14041 tatcagcaaa taagccatac acatattcat ttgcatcaaa ggcttgtagg tcgtccattt
    14101 gttccccaag accgacgaat ttcactggaa tatctagttc attgcgaatg gcgataacaa
    14161 taccaccctt ggcagttccg tccagttttg tgaggataat gcctgttacg tcggttgttt
    14221 ctttaaattg ttttgcttga acgaaagcat tttggccagt tgtagcatca agtactagta
    14281 aaacttcgtg cggcgcatta ggaatttcac gcgtaatgac acgttttact ttttctaatt
    14341 cgttcattag attgactttg ttttgtaaac ggccagctgt atcgcaaagt aaaacgtccg
    14401 ctttgcgtgc ttttgctgct tgaacggcat caaacatcac cgctgcaggg tcgcttccct
    14461 cggcttgttt aataacatcg acgccggtac gctcgcccca gacttctaat tgatcaatgg
    14521 caccagcacg gaatgtatcg ccagcagcta acatcacttt tttaccttct tgtttaaagc
    14581 gatgagccat ttttccgatg gaggttgttt taccaacccc attcacacca acaaacaaga
    14641 taacggttag cccgtcttct tcgatatgaa gtgcttcgtc ttctttttcg tctccttggt
    14701 aaatctcgac taatttttcg actatcactt cttgtacgtc ttttggatca ctgatgtttc
    14761 taagttgaac ttcacggcgt agcgtatcga ctagttccat gacagtttca aaaccaacgt
    14821 ctgctccgat aaggatttct tctagttctt caaagaaatc ttcgtcgact ttacgatagc
    14881 gagcaaccat ttcgttaatt tttccggaaa agttgccgcg tgttttggat aagccatctt
    14941 taaattttcc agaaacagaa tcagtttgct gagttatttt atcttttaat tttttaaaaa
    15001 aggtcatttt gtttactcct tttatttaat gagttcagct gtttcttcta aacgaactga
    15061 tactagtttg gagacgccgg actcttgcat ggtgacgccg tataatacgt cggcttcttc
    15121 cattgttcct ttacggtgtg tgatgacgat gaactgcgtg ccggactcga attgctttaa
    15181 gtaacggctg aatcgtgtaa cattggcttc atctaaagcc gcctctactt catccaaaat
    15241 acagaatggt actgggcgaa cgcgaatgat agcaaataat aatgcaatcg ccgttagcgc
    15301 acgttctccg ccagaacgaa gcgataggtt ttgtaatttt ttcccaggtg gttgaacgac
    15361 gatatcaatc ccggttgtta ggagattttc tggatcaagg agcaccagtt ccgcgctacc
    15421 tccaccaaat agctcaggga aaacaatcgc aaattcggtt ttaattgctt caaaactttc
    15481 actaaaacga attttcattt cttcgtccat ttcgtccatg actttaaaaa gggtttcttt
    15541 tgcggcaagt aagtccgctt gttgcctgtt taggaagtca aaacgttctt ggatacgctc
    15601 aaattcttcg atggcaccaa tattgacgat acctagttca tcaatagaac gttttaataa
    15661 gcgaactttc gaacgagctt gttcggtatt tacttctggc aagatttttt cttcggcttg
    15721 ctctggtgtt agtaagtaag cttcttgcaa acgatcaatt cggttattaa tatctacttc
    15781 taaacgaccg atgcttattt ctgcattatt tttttgctcc acgtaaaaac tgatttgatt
    15841 atttttttgt gttaattcgg cttctaatag ttctaatttt tcttgtagtt cagcacgagt
    15901 ttgtcttgtt tgcgcaagtt tttcgcttgt ttcagcctta tctttgcgca gttcttcaat
    15961 ggattttcta gctgattctt cgcttgtatg aacgctagtt aagttggttt ttaaggaagc
    16021 tagtttttgt tcagccgctt ctttttgttc gtaattttca tgtagcgttg tcgttactcg
    16081 ctcgacggct tctgtagcag attgaagttg ctctcgttta gcggcgattt gcgcttttaa
    16141 ggatgacaga ctttctaaat ctgctgcacg tttgctttct agtgctttgc ttgaacttgt
    16201 catcgctttg atttcttcat cggttgcttc gatttgtttt gcgatttcga cttgttcatg
    16261 tagtaaagtt tcttttcgct ccagtagttt gtttaattct tcgctaccgt ctgctttttc
    16321 aatatcgtat agttgtagtt gtttattgaa gcgctctaga ttctcagttt ctcggtctag
    16381 ttttccaagt aattcttttt cttgtaaacg taaattttca ccgattcctc gtgtttcttc
    16441 gagttcttca cgttttttcg ccatgctatc tttagctagt tgaaccgcag attccatttc
    16501 acgagtggct tcgtttaact cggtaatttt ctctgctaat tggcctaact catgttttct
    16561 cgttaaaata gacgattttc cgcctttggt tgctccacca gtcatcgaac caccggcatt
    16621 cacgacgtca ccttctagtg tcacaatgcg atacctaaag ttgactaagc gagcgagcgt
    16681 attcgcccct tttaaatctt tcgccaaaat cgttgtccct agagcattca aaataaccgg
    16741 agaaactttt tcatcaaaag aaatgacttc acttgcaagt gcgataaaag caggttggtt
    16801 gcttaaagcg tttttcgttg cagctggaag ttcgcgaggt tgaatagtcg aaagtggtaa
    16861 gaaagttgcg cggccacttt tcgttttctt caagaaactg atggcttcac gagcaacgcg
    16921 gtcatcttct acgacaacgt tctgcgcact tgccccaagc gctgtttcca tggcttgttg
    16981 gtacttcgcg ggtatttcta cgagttctac taacgcacct aaaatccctg gaatttcttt
    17041 tttcgctttt aagacttccc ggacaccttg gaaaaagcca gcataatcat ccgccaactc
    17101 ctctaatgtt tccttccgcg atttcatttg ttgcactgtt tcataatgtt tataaagcgc
    17161 acgttcttgc gttccaaaaa cagcttcttg tttcgctaaa gtttgctgta cttcacggta
    17221 aatttccatt tgttccgtaa gctcactttg gatttttgtt aaatgtgttt tggttgtttc
    17281 tatttgagcg agcatatctt ttctatcatc gatatgatgg ctattttcta aatctaactt
    17341 gtcaattcga ctcgtgatct gaccgatttg gcgctcaata taacctaaat cattattaat
    17401 tgtcgtttgc gtgtggcgca gatcaatata atcacttttg cggttttcga ttgcttcttc
    17461 ggataaatca tcgtatttgg caagtgttac ttctagctct tttttcgctt tgaccgcaat
    17521 ttcaagtgct gtttcttttt cgagttttga gctacttaga acttcttttt gctcttccaa
    17581 ggcagtaatt ttttccgtaa ttgccgccag tgtttctgcg taaacttgtt cattttcgct
    17641 actgtgcttt ttacgttcta attggagatt tcgctctcct tctagttgtt ccagtttttc
    17701 cgtttcaact aaaagacgtt cttgtaaatt atcaagcgca atatctgttt cattcagtgc
    17761 atgtttttcg cgtgaaataa ccgcttcttc ggcatgtaat tcttcgcgta gcttaattaa
    17821 aaccgtttga ttttcaccaa attctttacg aacttcggct agtttttctg ttaaggaact
    17881 gatttcgctc gcgagtaaag tcacttcgta tttttctagt tcttcttgtt ggaataaata
    17941 atctttcgca atagaagctt gcatttcaag cggctccaat tgtccttcta attcgtataa
    18001 aatatcttgt actcggttta aattttcttc ggtttcaaat aatttatttt ctgcttgttt
    18061 tttacggtgt ttatatttta atacgccggc tgcttcttca aaaatcgagc gacgttcttc
    18121 tggtttgctg ttcagaattt catcgatttt cccttgcgaa ataatcgaaa aagactctct
    18181 tccaagtcca gagtccataa ataaatcgac aatatctttc agtcgacaat tttctttatt
    18241 aattaaaaac tcgctatcac cattacggta aatacgtcta gtaacagcta cttcgctata
    18301 atcaagtggt aaaaaatggt cttcattttc gaggataagt gacacttccg caaaattaat
    18361 tggtttccgt gtatcacttc cagcaaaaat aacatcaccc attcggccac cacggagcga
    18421 tttagcggac tgctcaccaa gtacccagcg gattgcttct gtaatattac ttttcccgct
    18481 gccatttggc cctacaactg cagtcatgcc gggcacgaaa tctatcgcaa ctttgtcagc
    18541 aaaggattta aagccattca tttctaatcg ttttaataac atgtccggac acctccattt
    18601 ttgtttatct gtgtgttagt tggtttatag caaattgtgc cgcactttgt tctgcttgtt
    18661 tttttgttct gccgctgcct tttccgagta cttgtccgtt aacaattact tgggcatcga
    18721 atgctttatt gtgcgctggt cctgtttcgc caaggatatc atattcgatc aagacatcac
    18781 ggtcccgttg aacaatttct tgcagttgcg ttttataatc cactgtttgt agatatgccc
    18841 ctgcatcaat ttttggaaaa ataacacgtt ctaaaaatgt cacaactttg tcaatcccat
    18901 tatctaaata aagcgcgccg ataaaagatt caaatacatc cgccagaagt gccggacgag
    18961 ttcttccacc ggctttttct tcccctttac caagtcgtac gtatttagaa aaatgtactg
    19021 cttctgcaaa ctcgactaaa gaaggctcac aaacaattgc tgcgcgcatt tttgtcatgt
    19081 gtccttctgc catatctgga tatttgttaa atagataatt cgatacagtg agttcaagga
    19141 ctgcatcacc aagaaattct aagcgttcat tatctttcac attttcccgg cggtgttcgt
    19201 tcacatatga ggaatgtgtg aatgcttgtt ttaataattc aacatcttta aaatcgaatc
    19261 caacgctttc ttgtaactct tcccattgat tcatttcact tgctcctctc tttaataagc
    19321 aagttcattt tctaaacagc cactagcaaa aagctgctta gaaaatgaac caacaaaatc
    19381 tcgtgacctt gaaaaagagg ccacctgcgc tacttgtctc gcgtgcggaa gttaccacag
    19441 caaagataag taacacgggc accctcattt atccggtcac ataaagtttt atgcgttcgc
    19501 ctctatgtac ttcactgcat caccaactgt gttaatgttt tcagcgtcgc catcagagat
    19561 ttcaactccg aactcgtctt caagttccat tactaattca acaacatcta gagaatctgc
    19621 acctagatct tctttgaagg aagcttctaa agttactttg gattcctcga cacctaaacg
    19681 gtcgacgatg atttttgtaa ctttttctaa tacttctgcc atttttcact tcacctccct
    19741 ccaagtatta tataggatta tttctcctac gtaaacaaaa atatttaaag taatgcgagc
    19801 caattaaatt cgcattcatt aaccaatttt acatcaccat tccgccatca acagatagtg
    19861 tttgaccagt aatatacttc gaagcatcgc tcgctaggaa aagaactgca tttgcaatat
    19921 cttccgttgt tccataagca ccaagcggaa tttgcgctaa cattgcttct tttgtttttt
    19981 catctaattt gtcggtcata tctgttgtaa tgaaaccagg agcaacagca tttacgttaa
    20041 taccacgggg cgcaagttct cgagcagttg tttttgttaa accgataacg cccgctttac
    20101 ttgctacgta atttgcttga cctgcattac caatcaaacc aacaacagat gccatgttga
    20161 taattttacc tgcgcgttgt ttcatcattg tacggcttac tgcttttgta caaaggaaag
    20221 ttccctttag gttgatatta attacgtcat cccattcgtc ttctttcata cgcattaata
    20281 agttatcacg tgtaattccc gcattattca caagaatgtc cacacgacca aagcgttcga
    20341 ttgcttgttt gaaaaaggca tctacatctt cagcaatggc tacgtttgct ttcattgctt
    20401 ctacttcaac accatgttca gcaacgagtt ttgctgtttc ttctgcagct tctgggctac
    20461 cattgtaatt gaagaaaata tttgcgcctt ctttggctaa tttaatggca atgtcacgtc
    20521 caattccgcg tgatccacct gttactactg ctacttttcc ttgtaaagtc attaattatt
    20581 ctcctttcaa tgtcgctgca acgcttttca ctgattcagc gtcacctgct gacagtacag
    20641 ttacatcacg attaattttt ttaattaagc ctactaagac ttttccagaa ccaatttcga
    20701 caaacgtatc tacgccgttt ttaattaatt cttcgacgat atcttcccat aatactggag
    20761 aatagatttg cttgattagt ttatcgctaa tttcggattt atccgtagtt tctttagcgt
    20821 ccacgttatt aaccactgga atctgaccat cagaaatttt aacctctgct aaaacatcac
    20881 ggaaagcaag tgcggctggt tccattaagc tagagtggaa aggtccgcta acagcaagtg
    20941 gtaatacgcg ttttgcgcca ctttcttttg cttttccgcc tgctttttca acgccagctg
    21001 ttgttccaga aataacgatt tgtcctgggc agttaaggtt agcaagttgt actgcatcgc
    21061 cttctttagt tacttcttcg gtgattgttt ttaatgtttc ccggtctaca ccaagaactg
    21121 cagccattgc gccagcacca tttggtacag ctgcttccat taattcaccg cgcttacgta
    21181 caaggtaaat cgcatcactt gcttctaaaa atccgccagc aacaagcgca ctatattcac
    21241 caaggctatg tcccgctacg taatcagctt tcacaccata tgtttctaaa gcgcgtaaaa
    21301 tagcaacact tgtggaaact aaagctggtt gtgcgttttc ggatttcgtt aataattcaa
    21361 ttggaccttc tgtaataatt tctgtgattg aaaacccgag tctttcgtca gcatcatcat
    21421 agattttttt tgcttcagga tattctgctg ctacatcttg tcccatgcca attttttgtg
    21481 ctccttgacc gggaaataca aatgcaattt tagtcattag attctgttcc tcctactttt
    21541 actttgtcta cttctgcttt aattgtttcg accacttgtt tttcaaccat ttcacgtact
    21601 tgacggattg tggtgaaaat accattcgca ttggatgaac cgtgggcttt tacaactgga
    21661 gcttgaacac cgaacaaaca agcaccgcca tattcgctat aatccatttt tgcttttaaa
    21721 gccattaaat cttttttcaa gaagcttgct gcgactttat ttttaaagcc attaagcaaa
    21781 ctcattttta gcatacttag gaaagcggcg cctgttcctt cgatggactt aagtaccata
    21841 ttaccagtaa atccgtcggt tacaacaaca tctgctacat ccattaataa atcacgcgct
    21901 tcgatgttgc cgataaattc gtaagcgtct tgatttttca taagttcgaa tgattttttt
    21961 gttaaatcat ttccttttgt ttcttctgtt ccaatgttta aaagcgctac gcgaggacga
    22021 tcaattttac gcactttttc tgcgtaaacc gagcccatta aaccaaattg taataaatgt
    22081 tctggttttg cttccgcatt tgctcctaaa tcaagcataa caaagccttt tcctgtcacg
    22141 gttggtagtg taggtgctag tgctggacgg tcgattcctt tgatacgacc aataacaaac
    22201 aatccagtag acattaaagc ccctgtgttt ccagctgaaa tacaagcatc tgcttctccg
    22261 tcttttaccg cttgggcagc aagtaccata gaagcttttt tcttccgttt tacagcgcga
    22321 actggttcgt catcactttc aattttttca tcggtatgta taatttttac gcgggtttta
    22381 tcagttaaat attcatttat ttttgtttcg tctccaaaaa gaagaatttc aacatcttta
    22441 tattgggcca cagctttcat cacacctaaa acaatttctt ttggtgcatg atctccaccc
    22501 atcgcatcta cagcaatttt cattatacgt cagtccttta ttttcatttt tgcgttgcgt
    22561 gatacatttc aaatttgcct ttaagtacaa tttcatctcc aacatagctt ttcacgtcta
    22621 cgattgtaat agctctgttg tctgttgccg gacgtacttt tgcttttgcg atgatgcgtt
    22681 ctccttcgtt tacagaacga acaaagcgaa cggttgcttg tgttgttaga gctatttcat
    22741 ttgggatgac ggcggttgct aaggaattag cttgggcaaa caaatgatgc ccacgagcga
    22801 ttttatttcg tttaaaaaca tgctcactac gcacatcaaa aatcgaaata gcgctcttgc
    22861 taagttgaat atcaataatt tcaccaatca cttcatcgat gggaaggctt tttactgcat
    22921 cggcataatt gacactcgca acatgtttga ttcgctctct gagttcgggg atggaaagtg
    22981 ctactctatc tagacgaata gtttgcacac tgaccccaaa tttttctgca agctgctcat
    23041 ctgttatgaa aggattttct tcaatcgcaa cttgaagttt catttgacga tcctttttag
    23101 aatatttttt catgcacgta tcctcatctc tttttttgtg aaaggtatta ataccagcta
    23161 ctaaacagta ggtaaaaaaa ggaagttacc tctgtaggat aacattcaga acttcctttg
    23221 tatttattgg tactttaata tgttattaaa aatcaagcca agttgcaagt ttttttaaag
    23281 attgttacat aggcttaatc tagtttttgc tccgtgaaga cgccttcttc ctccagaagt
    23341 gctactaatt tttcgtagtt tttgttctct aacatatctt cttcaaagat catgtgaacg
    23401 gcatcttggc gggcgatctc cagtacccgg taatcgtgaa ccatatctgc tactttgaat
    23461 tctggaacac cactttgttt tctgccgaag aaatctcctg ggccacgaag ttctaggtcg
    23521 cgttcgctga caacgaagcc atcgtttgtt tctgacataa tcatcatacg ttctttgccg
    23581 acttcggttt ttgggtcagc aattaaaata cagtaagact gatctgctcc gcgcccaact
    23641 cggccccgaa gttgatgcaa ctgagctaaa ccaaaacggt cggcatcgta aatgaccatc
    23701 atggtagcgt ttggcacgtt tacaccaact tccactactg tggtcgaaac aaggcaatca
    23761 atttttttat tattaaagtc gcgcataatt tgctctttat ctgctggtaa tagtttaccg
    23821 tgcattagac ctggaatata tttagtgccc catttatttt gtagaatgtt gaaaacgtct
    23881 atcgcatttt gcacatctag tttttcagat tctccaatta gcggacaaat gatgtagact
    23941 tggtggcctt tgtcgatttc tttttccata aaaccgataa cgcgatcaag catttgatgt
    24001 tttacccagt aagtttcaat ttcttttcga ccagctggga gttcatcgat aatcgataca
    24061 tccatttcgc caaacgctgt aatggcaagc gttctaggaa ttggggttgc ggtcataaat
    24121 aaaacatccg gatattcccc tttttcacga agaacacgac gctgcgctac gccaaatcga
    24181 tgttgctcgt cagtaataac taaacctagg cgatgataaa ttacttcgtc ttgaattaat
    24241 gcatgcgttc cgattaaaac atcaatggag ccattttcaa gcattgctag taattctctg
    24301 cgctgtttgc ctttcacact actcgttagt aagccaactg taatatcaaa aggttgcaac
    24361 agctctacta aggaattcgc atgttgctcg gctaaaattt cggttggcac catgagtgcg
    24421 ctttggaagc cacttttggc agctgcatac atggcaatag atgctacaac tgttttaccc
    24481 gatcccacgt ctccttgtag caaacgattc atatgaaagt gtgataacat atcaccgcaa
    24541 atttcattga ctactcgttt ttgtgctttt gttagtggaa atggcaagga atcaatgtaa
    24601 tggcgcaaat cttctacatc gtaattaatc gaaattccac ctgatttctc gcgttcaatt
    24661 ttacggaaaa actgcatttt caattggaat aacaagaatt cttcgtagac cattcggcgc
    24721 ctagcttgtt tcaattcctc attattttta ggaaaatgca gaatgcgcac tgcttctagg
    24781 cgatccatta attgatactt ttctaataaa ttgcttggaa taacttcttc tatatcttga
    24841 ctataactat caaaagcaag tctcgtatat ttttgcattg ttttattgcg tagcgttcct
    24901 tttagacggt aaacgccttc tagttcttct tcactttcga cagcgcctat ttttattttg
    24961 ctggctgtaa cttgggcgcg gctcttatcc catttgccag agattgtcac tgtttcgcca
    25021 acacttattt tactttttaa atagggttgg ttgaaaaaat cgattttgat gacttgccct
    25081 tcagttgaga cgcggaaaga gagcttggat tttttgcgac cgtagaaagc aacggttgcc
    25141 tctgttagga cttcgccttg aatggtaatc cgttcttcat gcgccacttc tgataaatcc
    25201 cgcaaccgat aatcctcata gcgatacggg aagttccaaa gcaaatcatg cacggtggat
    25261 aaacctaact cttttaacgt tttcgctgtt tcttcgccaa ttcctttgat ttcagttgtc
    25321 gggattcgtt taagttcact cacgcttatc ttctggcgac agtccaaaaa tcttccgctg
    25381 aattgcacgt ccagtcggtg tagccgccaa tcctccttct gccgtttctc ttaaagagct
    25441 tggcatttgt aagcctacgc ggtgcattgc ttcaattact tcatcacatg gaatgcggct
    25501 cttaatacct gcgagcgcca tatctgctga aataattgct tgcgaggaac caagggcatt
    25561 acgtttaaca catggaactt ctacaagccc tgctacagga tcacacacaa gtccaagcat
    25621 atttttcatt gtcatagcca tcgcgtgtgc tgattgttct ggcgtcccac cggctgctgc
    25681 tacaatcgcc gctgaagcca tcgcacttgc tgagccaatt tctgcctgac agccaccagc
    25741 cgctccactt ataaaagcat tattcgcaac aacataccca aaggcacctg ctgtgaataa
    25801 aaagttcacc atatcctcac gcgacatttc tagacgatct tttaaggaaa aaagtacgcc
    25861 cggtacaacc cccgcgcttc ctgccgttgg tgttgcgcaa ataacgccca tcgaagcatt
    25921 aacttcattc gtcgcgattg cttttgctac agaatcaagt aacacttcgc ctgataagaa
    25981 gtttcctttt ttgatatagt cttgcattag gacggcatct ccgcctgtta agccagttgt
    26041 agaagtaact cccgtctcac cttcacgaat agcttcttcc ataatatcta aattccgttc
    26101 catcgcagct gttatttctt cccgcggtaa accagaaata ttcatttcac gcttgatcat
    26161 aatttcagca atagttaagt tctcgcgttc agcgatatct actaattctg ctacagttct
    26221 aaacattgtc cacactcact ttctttaccc tttaccaaca tacctgattt acaactcaaa
    26281 ataaagccaa atgcacgttt tgtttacgca catttggctt tacacaaatc gagcgaaagc
    26341 caccgattta ctagaaaact actaaatcat gacacttgct acttgataaa tccctggtaa
    26401 ttcagcaatt ttgctaatta aagcttgttc aacttgttgg tctacttcaa tgaccattaa
    26461 cgcttcatcg ccttttactt tacgggacac tttcatttgt ccgatattga ttttatggtc
    26521 ggcaatcacg gaagatactg cagcaatcgc gccaaatttg tcttgatgta aaataaggat
    26581 agctggagca gttccagtaa attctagttc aaattcgttt aagcgaataa tctctacttt
    26641 tccgccacca atggatgcac caattaatgt catttgttgc ataccatgtt ttaatactag
    26701 ctttaccgta tttggatgag gtggctcttc tacttcttcg ataaactgaa tgcgcatgcc
    26761 ccactcttca gcaagcttcg gagattcttt catgcgcgga tcatctggct caaagccgag
    26821 caatccgcca atcaaagcta catcagtacc atgaccttta taggttttgg caaaagaacc
    26881 atataaatga atatctactt gggatggttg ttcattaaaa acagctcgtg caatggcacc
    26941 aatacgacta gcgccggcag tatgagaact tgacggacca atcattacag gaccaataat
    27001 atcaaatacg ctattaaatt tcactaaaat catcctttct tctattcatt tacagaggcg
    27061 tctttattct acagcaaaaa tatacggata aactggttgg tcgccttcgt gaatttctac
    27121 ttcgacatca gggaatgctt ctgttacttt atcagcaagc gtttctgctt ttgaagtatc
    27181 tgcatcttca ccaacaatga tagtaatgat ttcgctatca tcatcaagta gtttttccag
    27241 tgtttcgtaa gcggcttctt ctaatgttgc acaactaact ttgattttgc cttcaaccat
    27301 accgatgaag ctgtcttttt tgatttcgac accttctact gttgtatcac gtacagctgt
    27361 cgttacttgg ccacttgcta cgtcttcaat tgctgctttc attgcttctg cattagctag
    27421 gaaatcttga tctgcttgga atgaaagaac ggcagtaagt ccttgtggaa ttgtttttgt
    27481 agggatgatt tgaactttat catctcctag aatttgtgcc gcttgttccg cagccatttg
    27541 gatattttta ttatttggaa gaacaaaaac ttgttctgca tttgctgatt caattgcttt
    27601 tacgatatct tctgtacttg gattcattgt ttgaccacct gaaagaacaa cagacactcc
    27661 catgctctca aatagtttct tcaatccttc tccagctgaa acagtaacaa taccataagc
    27721 cgctttttct tttgctggca ctttgtcatc accaacaatc tcagtatgct gttcgcgcat
    27781 attttccact ttcattttaa gtagactacc gtattgctga ccgtagttta gtacttcacc
    27841 aggatgttcc acatggacat gtacttttac tacttcatcg tccgcagcta ctagtagaga
    27901 atcccccagt ttacttaaat cttgacggaa ctgttcttcg tcaaaaggtt tttgaccggg
    27961 tttgttttcg ttgattttca cgataatttc ggtacagtaa ccaaaatgaa tatcttccgt
    28021 tgacataaag tcttgcacat gacgatgatg ttcggcatta attagctcac ccatagatgc
    28081 catatagtca ggagcttcag ccattttgcc agttagtgcg ccataaaatc cttcataaat
    28141 aatgataaga ccttgtccac cactatcgac aacaccaact tcttttaaaa ctggaagtaa
    28201 atctggtgtt ttttctaatg cgactttccc ttgttttaaa attgcttcca ttactaattc
    28261 gatatcttga tgttcacttg ctgctgcaac tccggctttt gcggcttcac gagctacggt
    28321 taggatggtt ccttcgactg gcttcatgac agctttgtag gcagtttcca cgcctttaac
    28381 gaaagcacca gcaaattctt ccgcgtttaa cgtttcttta ttttcaatcg ctttagaaaa
    28441 tcctcggaaa agttgggata aaataacacc agagttccct cgggcaccca ttagtaagcc
    28501 tttagccaag tttgctccaa cggcactaat tgtttctttg tcatttttcg caacttcttc
    28561 tgctccactt gtcatcgata gattcatatt cgttcccgtg tcaccatctg gaaccgggaa
    28621 gacattcaat gaatctacaa aatcagcatt ttttgctaaa ttctctgctc caagcgctat
    28681 cattgctgca aatttctctg agtctaactg atatatactc acttacataa tcctccttaa
    28741 gattccttga ttactcggac accttgaaca taaatattca ctgattccac tgtaataccg
    28801 agtgtttttt ctagtgtgta tttgacgcgt tcttgaacat tatgcgcaac ttcggaaatt
    28861 tttgttccaa agctaacaat gatatacatg tcaatatgaa taccttcttc ttcttgtcta
    28921 actataacac ctttagtata attttctctt cttaaaatat ctgtcaaacc atcacgaatt
    28981 tggtgtctac ttgccattcc aacgatgcca aaattttctt cggcagctcc accagcgatt
    29041 gttgcaataa catcactagt aatgtcaatt ttgcctagct ttgtgtcgat ttcaattgcc
    29101 attctatatt cctccctacg gattatattc tcgttcgatt attttttagt attgattttt
    29161 atttaattat aaagtcgtcc ctacctattt tactataatc agggtccttt ggaaagcata
    29221 tcctccattt gcctgattaa agctactttt atgctgtcaa gtaaaaattc tttgcactat
    29281 tttcgcatat cctcttgcaa agtatacttg tttatgataa attattctag tgtatgaaaa
    29341 acaaatggat aggttatttt aaataaatta tccgaagagc tctgtaagga ggggtaaact
    29401 atggctaaag aatgtgttat tacaggccgc aaatcacgtt ccggtaacaa acgttcccac
    29461 gcaatgaact ccagcaaacg tacttggaaa gctaacttgc aaaaagtacg gattctggtt
    29521 aacggcaaac ctaaaaaagt ttgggtatct gctcgtgcgc ttaaatctgg taaagtggaa
    29581 cgcgtttaat tgaaggagaa atcaagtgca gcgacaatta tgtcggtgca ttttttcttt
    29641 gccttaaaat aaaaaaatac aggccgagtg cacctgtatt tctagttaat cattactttg
    29701 tgttaataaa atcattccac ttttaaagga aaattccccc atttgtccca caaactcatt
    29761 acttgataga gctgaaccta ctgggtaagt ggcattttcg agcgggtagg cgaatccttt
    29821 tagtgtcagt cctgtcacgt ctttcatcgt tgtaaatgcg acatatttct tatcaggtag
    29881 tttttcaata gtgtagctac ctggcatata cattttgatg tagttatgac ggtcaatcat
    29941 ttctacaact ggcacagcgc ttaaaaattt cggcttggtc aacatcatta gattcgcaag
    30001 tagatggtct aagcggcctc ctgttgcacc aaaaatgcgt atcttatctg gattttgctc
    30061 catcgcccaa cttaatccaa tttccgtatc tgtttcatct ttttctgcag gaaattcgtg
    30121 tacatctgct actttggttt tcaaatgagc cagttcttct ttagagagtg aatcaaaatc
    30181 tcccatcgca acggtcggta caattccata gtctaacaaa cgttttgctc cgcggtccac
    30241 gccaatccaa ctaatctctg cgctcgtata ttgtgctaaa tcaggaattt cggacgcagg
    30301 tccaccaacc atgatattaa ttattttcat acttgagtcc ccttcttccc taacaaataa
    30361 gactggaaca gaggtcccag ccctactatt agtttactcg cctacaatgg cacgtaattt
    30421 atcaattggt gtttgacgat ttttatttcc ataaatgtaa ctaccagcta caaagacatt
    30481 tgcgccagca tcacggcata attttgctgt ttcatgatcc acgccgccat ctacttcaat
    30541 ttcgatatct aagccttttt catccactat tttcttgaaa gcactaattt tttctagtac
    30601 ttctggaatg aatttttgtc cgccaaaacc aggatttact gtcataaata gaaccatatc
    30661 cagttcattt aaaacgtgtt gtaaaacatc gattggtgtg gctggattaa gcactgcgcc
    30721 agctttcaca ccgtaagaac ggattaattg taatgtgcga tgaagatgcg tacaagcttc
    30781 gacatgcacc gtaatgtagt ctgctcccgc ttttgcaaat tctggaatgt atgtatccgg
    30841 gttttcaatc attaaatgaa catcaagtgg tagttttgtt tctgggcgaa tggcttgaac
    30901 aacagcagga ccaaatgtaa tatttggaac gaaatgtccg tccataacgt caatatgaat
    30961 gtagtctgca ccgcaatttt ctacttcttt aatatctctt gcaagatttg caaagtctgc
    31021 acttaaaatc gaaggagcta tttttcccat tcttaatacc tcggctttct gttttttaat
    31081 tcttgtaaaa tttggatata gtgtttgtag cgaaattctg ctatttcatt tgcttcaaca
    31141 gctgttttta cagcgcaatt cggctcattg tcatgcatgc aacctcggaa tttacagcca
    31201 ctacgacgat cttccatttc cggaaaacaa aattgtaatg tttcaggttg caagtcatcc
    31261 cattcgattg aactaaagcc aggcgtatca gcgacaaatc catcgccaat cggcattagt
    31321 tcgacgtgtc tcgttgtatg ttttccgcga ccgagtgcgt tcgaaatttc tgctgttttt
    31381 aaagttaaat cactatttaa gctatttagg agagtcgact ttcctacacc agattgccca
    31441 gcgataactg cagttttccc actaatatag tctttaatgg cttctttatc cggttcatca
    31501 ttggtaacaa aaacatcata accaatcgct tcgtaaatgt ctttgtaaac agcaatctgt
    31561 tctttttcag attctgatgc caagtccatt ttactaatgc aaataactgg cttgatatct
    31621 tccttctcaa tagctactaa aaaacgatcc gcaagattcg tggaaaaatc cggctctact
    31681 gccgaaaaca ccaaaattgc aatatcaatg tttgccacgg gaggccgcac aagggcattc
    31741 tcccgggaca ttacatctaa aatgtaacca tctgttttat tttctatttg aaattctaca
    31801 tcatcgccta caagtggaga aatatttcgt tttctaaaat tccctctcgc tcgacattga
    31861 tatacttttc cttccgaaaa tacatagtaa aatccgctca acgctttgat aatttgtcct
    31921 tccagcacat ttcctccgtt ctatttttaa tttggataag ggactgtacc ttcatcgatt
    31981 actttatcat cactgataat tttgtagcct gcgctagaac cttcttcaat ttggaaagtt
    32041 atttctaccg aggtattttg tgtaatgctc atttctcggt aagcgctagt catgctatgg
    32101 tctttatctt gaatgtagat ttgaattttc tgtggttgtg ggttttcttc atcacttggt
    32161 gtatatggga tgttaaatgt tttagttact tctttgactt gtttttcttt tggtcctgca
    32221 gaaatgacaa tctcgattgt atcaccagga ttcattgcag ttccagctga tggggactgc
    32281 gaaataactt gtcctttttc aactgtattt gaattttctt ccttacttga aactttgagt
    32341 ccaagtggtg aggcataatc ttctacagct gttttggtat agccgcgtaa atctttaagc
    32401 gaaattggtt ctgcaccttt acttacgaca aatttcacat cggtagattt agcgactacg
    32461 tccgttcctt gagtcggtgt ttggcttata attaagcctt tttcaacttc agaactatat
    32521 gcttcctccg aagaaatatt attaaaccct tgttcttcaa gtaacgcttt tgtatctgtg
    32581 tagcttcttc ctgtatagtc gtccatagtt atttttttag aaccaatgct tacgaataaa
    32641 ttgatttttg ttcctttttc tttcatttct ccagcttctg ggtcggtatt aattactttc
    32701 ccttccgcta cttcatcact atttttttct gccgttttac ctatgacaaa gccttctttt
    32761 tggagtagcg ctactgcttg gtcttccgtt ttaccagaaa catccggcac agcgacttca
    32821 tcagggctct tgcctaaaag ccacagtagt aaaataccaa tgataaaaat gataatgaca
    32881 gaagaaacaa tgagagcaat tttctttttc ttactcattt ttttcttttt cttacctttg
    32941 ttctcttcgg gagcaacttc agccgctgct acttttcctt ctgggacaat cgttttgtca
    33001 aggttttgca tcgtgtcttt cgttgcgatg attggaattg cttttgtatc accatcatct
    33061 gttgggaaaa tatatttagg ctcatttaaa cggtcttgat ttaaacaagt ttgcaagtct
    33121 ttttccattt cttccgcgtt ttgataacgt aaaaatggat cttttgccgt tgctttaatg
    33181 ataatatttt ctaagctttg aggaatttct ggattttgcg ctcttgctga tggaatatcc
    33241 gcttgcaaat gcttaatagc aatagaaact gcagactcac cgtcgaaagg aacttttcca
    33301 gttaatagtt catatagcac gattcctagt gaatagatgt ctgatttttg agtagccatt
    33361 ccaccacgtg cttgttctgg tgataagtaa tgcaccgaac ctaacaaaga atttgtttgt
    33421 gtgatggatg tttctgaaag tgccatcgca atcccaaaat cagtaatttt cactacgcca
    33481 tcatgatcga ttaaaatatt ctgtggtttt aaatcacgat gaataatgtg atgttgatgg
    33541 gcaattgcca ccgcagaaac gatttgaagc ataatatcta cagctttatc gtaactgatt
    33601 gggtgatttt cgtgaatata ctgttttaaa tccattccat ccacatgttc cattacaata
    33661 taatgtaaat cattttcttc accaacatcg taaacactaa caatattagg gtgaacaagg
    33721 ctcgttgctg attgagcttc ccgttgaaac cgacgaataa ggttgctttc atcagctaaa
    33781 tcgattcgta aaatttttac tgcaacatct ctatcaagaa taatatcatg cgccaaatac
    33841 acattggcca ttccgccgcc gcctattgca tgtaaaattt tatatcgatc acttaatcgc
    33901 ttaccaatca tcatgaagca tccctccctt tctgcgtcag atctcgttcg actaacagca
    33961 cagttatatt atcttctccc ccataagaat tagcttttgt aataaataca tctgcttttt
    34021 cagaaagagt tcttttactt tttaaaattt cttccatttc tgtttctgga accatattcg
    34081 ttaaaccatc ggaacaaagt agtaacgtat cgctcgtttg aaaagggaca acaaatgtgt
    34141 ccacttctac ttttccttct acaccaagtg cgcgtaaaag aatatttttc cgcggatgat
    34201 tcatggcatc ttctttgctg atttcgcctg ttcgaaggag ttcatgtact agtgaatgat
    34261 cttcggttag ttgacgtaag acatgatttt gaagtaaata acctctgcta tctcctacgt
    34321 tggcaataac gacttgtgac tgcgccataa ttgctgcaac aagtgttgtt cccataccat
    34381 ttaaatccat ttcactttcc gaataaagaa caatttcttt attgacttct tgaattgttt
    34441 tttgtagcca agtttcaatt tcttctgcgg tcaaaagtgc ggtcgtttct ttccatgcat
    34501 cgcttagtag acgcacagcc atttcgcttg ccacgtctcc tgcccggtga ccacccatgc
    34561 cgtctgcaac aatgacaatc ggctggttat ctttattttc aaaaaccccg ccgttgtctt
    34621 cattatgatg tcttattctg cctctatctg ttctaaattc tgcatgcatt ttaaaagcac
    34681 ctcactattt ttcaggactt tacttttcta aggctagaaa cgaagaaacc atcgcttcca
    34741 atatctgttg gtaaaagttg aataaaatcg tccttcttga tttgcgccaa tttttcaggg
    34801 agtactacag gttctagtgt gaattctgga tgtttttcta agaaagcgcg aagaaccgtt
    34861 tcattttctt ccttgtcaat ggtacaagta ctataaacta atataccatt ttcttttact
    34921 aattggctaa catcatctaa aatcgctaat tgaatttctg ctaatttgtg gatatctttt
    34981 tctgttttcg catatttgat gtctggtttt ctgcgaagaa cgccaaagcc ggagcacgga
    35041 gcatccacta aaatacggtc aaatgtttct ggttcaaaca tggtacttgc ggttcttgcg
    35101 tctaaatgcg ccgtacgaat attaagtagt tgcaatcgtt tggcggcttg atcaattagc
    35161 ttggttttct tttcgtggat atcgagtgca tgaaccattc ccgtgccgtg cattttttcc
    35221 gcgatatggg ttgttttccc gcctggtgcc gcacaagcat ctaataccgt caaattgtct
    35281 tctagttgaa gcgcataggc tgcgagcatt gagctttcgt cttgaatgct acatttaccg
    35341 tctttgtatg cttttgtttc tgctacagat cctttttcaa caagtaacgc ttcctcgata
    35401 aattcattac gtgtcacggt gattccttgg tcatttagtt ctttgattaa ttgttcagta
    35461 ggaatttctg tttggttgac gcggatactt tggtgtggcg cgacaaggaa tgctaaaccg
    35521 atttcacgca gtttttcgat accatattga tctgcccacc tttttgctaa ccattctggc
    35581 agacttgttt caacagcgat tttttgcaca gggtctttga tggcatcaat acttggtacg
    35641 ccttttcgaa taacattacg caatacgccg ttgacgaact tagttacacc ttggtgtcct
    35701 aaatctttcg cgatgtcacc agcttcattt aaaatcgcgt gctcaggaac tttatctaaa
    35761 aaggttaatt gataaacgga cattcttagt aagtttttca cccaattgtc gggttcttta
    35821 ttgagaaacg gtgctaaata gtaatcaagt gtaattttgc gctgtgttgt accatatact
    35881 aattcagtca aaagcccttt atcaagcgga tttaactttt gtttttttaa tgcgtcatta
    35941 attaataagt ggctgtatga ttgattattt tcgattttaa tgatgagttc taatgcaatc
    36001 gcacgaactg ttttttgttt tttcatttat tcaccaaacc ttgtcgactt gcttaaattt
    36061 ctgccagctc cggtcatgaa tgagtgaaca tccatcttcg gttttcctgc tggttggatt
    36121 actgttggta cgatgagcgt gccgtcgcct gctacgattt taagcgttgt tttatctgct
    36181 aaaatggcac ccggttcgcc gtcctctttt gtttcttcat atgtttcttc ataagttgct
    36241 tcccagattt taaatggttt ttcttccagt gttgtataag ccactggcca aggagacaat
    36301 cctcgaattt gattaaagat agtacgtcct ggttttgtcc agtcgatttt ttcttgttct
    36361 ctagaaatat tacgtgcaaa ggttaccttt tcagggtctt gtgggattgc cgttattttt
    36421 ccagctaaaa agtcgggtaa tgtgtccatt aataattctg cgcctaattt gcttaattta
    36481 tcaaacatgg tgccagtatt atcttcatct gtgatgggaa ttttacgctg gctaatcata
    36541 tccccagcat ccaatttctc taccatatac ataatcgtaa cgcctgtctc cgttttcccg
    36601 tcaagcagtg cgtagtgtac aggagcacct ccgcgatact ctggtaaaag agatgcatgc
    36661 acattaatcg caccatgctt tggtgattca agcaaactat ttggtaaaat ttgtccgtaa
    36721 gctgctgtta caagtaggtc ggcttctaga gcaattagtt cttctaattc gctagatgtc
    36781 cgtaattttt ctggttgata aactggaata gctagttcta aagcagcttt ttttactggc
    36841 ggtggtgtca aaactcgttt gcgtccaact gggcgatctg gctgtgtcac aactgcaact
    36901 acatcatatg tgctggctaa ttgcgctaaa accggaacag aaaattccgg tgttcccata
    36961 aaaataattt tagtcattgg tttgctcctt ttacattagt acgtaaggct gtacgtcaat
    37021 agttattgtt aaaccttttt gttggtcttt ttgataatgg gtaattagtg tttttagttc
    37081 tttttttaag tttggttcga ttttatattt aataatgcac tggtagcgat atttgttttt
    37141 aattctcgtg atggtgctag gaacagggcc aagaatcacg gcatctggac cgagctttcc
    37201 tcgtaaaaac tgagccattt cttgaatggt tcgaatcgct ttcatttcat tttcatcgct
    37261 gacattaatc atggttaagt aataaaatgg cgggtaggaa cccatttttc gtagctgcat
    37321 ttcgtggtta taaaaaccga tgaaatcatg ttttttggcg aattcaatac tgtaatgttc
    37381 tgggttatag ctttgaacga tgacttctcc tgtccgctca tgtcgacctg ctcgtccact
    37441 tacttgagtg agaagttgga aagttcgttc cgaagcgcga aagtctggta aatgaagcat
    37501 tgtgtcagca tttaatacgc caactaacgt aatatctgga aaatctagtc ctttggcaat
    37561 catttgtgtt ccaagtaaaa tatcggcttc gtgattgcgg aagcttttga gtaatttttc
    37621 atgagcacct tttgttctag tggtatccac gtccatccgg atgacgcgcg cttctggaat
    37681 taatttggtc aaactttctt ctactttttg tgtaccggtg ccaaaataac gaatatgctc
    37741 gccctcacag ctcggacatt tttgcggaac acgttcttca tgtccgcagt aatggcattt
    37801 catttgattg ctcgattgat gataggtgag cgaaatatcg cagttcggac attccacaac
    37861 ataaccacaa tcacggcaca tcacaaaaga agaataacct cggcgattta gcattaaaac
    37921 tgtttgttct tttttggcaa ttcgctcttt gattttttct agtaattcag tcgaaaattc
    37981 ggtgcggttt tctttgcgta attcttcgcg catgtcgaca acgctcactt ctggcatcgc
    38041 ccgatcattg acccggctag gaagttcgat taacgtatac acaccttttt tcgctctagc
    38101 aaaagattca agggacggcg tggcgcttcc gagaactact ggacattgat attttgttgc
    38161 gcgccaaatg gctacatctc ttgcatgata acgcggatta tcttcttgtt tgtaactcgc
    38221 ttcgtgctct tcgtcgataa taataatgcc gagattttca aacggtgcaa atacggcgga
    38281 acgagcccca acgacaacgc gcgcttcttt gcgttcgatt ttgcgccatt cgtcgtattt
    38341 ttctccggaa gatagcgcac tatgtagtac cgcgacctcg cttccaaagc ggcttttaaa
    38401 tcgctctacc atttgtgggg taagggaaat ttctggtact aaaacgatgg cttctttacc
    38461 ctcttttaat tttgcttcga tggtttgtaa atagatttcg gttttcccac ttccagtaac
    38521 cccgtgtatt aggaatgttt cttgatcagt tgctgcggtg attttctcgc acgcagtttg
    38581 ttgatctggt aataactgaa gcgattcact tttttcaaat tggtggtttt catagggatc
    38641 acgcgaaaca attttttctt gaatagaaag tatccctaag tcgactaatt tttttattgt
    38701 ggcatccgtt gtttccgcct gtttttttaa ctcggctgcc gtaatttcgt tgccttcaaa
    38761 agcttggaaa aatgcgagta cacgtgactg tgctttggcg tttttcggca tatcttctat
    38821 tatttcagct agttggtgtg gtgatttgag acagttaaca acgcgaattt ttttactcgt
    38881 gattttattt ttgacttggt agactacttc cacactacct tctctgaccc atttgccaat
    38941 ttgtttgagc aaaccgcggg cttctgccac tttccagtct agtgtttcgt agccttcaaa
    39001 tagctgctct aattcttcgt tttcctcatc taagcgcaaa aaatattttt cgtattttgc
    39061 tcgtagcgcg gctggtaaca tggcttggta agcagacacc cggaaactca gcgtatcttc
    39121 tgctaaccaa tcgcctagtt ccatcaattc ttcatttaaa acgggggcta aatccatcac
    39181 cccgtcaatg ccttttaatt ttgggttttc ttctgtttct ccaagagcaa tgacaaatcc
    39241 ttgtatttta cgatttccaa atgggacact tactcgcata cctggacgaa taagttcttc
    39301 taaatcttct ggaatatagt agtcaaatgg acgatccact tgcatggctg gaacgtccac
    39361 aattactttc gcaatattaa tcattcgttc acttccttaa aaagttagca gtttctttga
    39421 tgatatgttc agcaacttct tttttatcta gtatcggtaa cgctttgcta gaaccatctt
    39481 tccggtaaaa tgtcacgata tttgtatcac cagaaaagcc tgctcctgcc acactaatat
    39541 tgttagcgac aatcatatcg gcatttttgg atgttaattt tttacgtgcg tttgcttcta
    39601 gattttctgt ttcagcggca aagccaatca cgacttggtc tgcagttttg tgttgaccaa
    39661 tttcgagtaa aatatctttg gttcgtttca tttcaatggc aaaatcgccc ggctgttttt
    39721 taattttttg gtctgatact tttgctggcg tgtaatcggc aactgctgcg gtcatcacga
    39781 agatatcttg tgacacttta tgttcatcca cagcttgata catttcttct gccgattcga
    39841 catagattgc ttctacacca ggtggtacgg gaagtgcttt gcttgtcgta acgagcgtca
    39901 cttttgcacc atgacgagct gcggattctg caatactaaa gcccattttg cccgtggaat
    39961 ggttggtgaa atagcgtaca ggatctaatt tttcgcgagt tgcgccggct gtaactagca
    40021 cgtttttgtc gcgcaataaa tctttatctt cttgaaaaaa ttcagcaata cgaagaacga
    40081 ttttttctgg ttcttcaaga cgaccgcgac caacgtagcc acaagctaag taaccttctt
    40141 ctggctcgat aaaacgaaca ccgtctgcgt ataatcgatt aatattccga ataactgctg
    40201 ggtgctgaat catgtggaca ttcattgctg gcgctaccca aactggtgcc tctgttgcaa
    40261 gaatggttgt cgttaccata tcatcagcga ttccatttgc cattttgcca atcacattcg
    40321 cggtagctgg tgcgacaatt actaaatcgg cccaatcagc taaatcgata tgtgcgacaa
    40381 cacttgattt tttttcgtca aatgtatctg tgtatacatc atttttagat aatacttgaa
    40441 acgaaagcgg tggaacaaat tcctgagcat gttctgtcat catcactttg acgtttgctc
    40501 ctgcttgcgt taatttactt gtaagtgcga ctgctttata aacagcaatg ccaccggaca
    40561 ctgcgagtaa gatatttttt ccttgcattg aaaagtcacc tcatttttaa tataaaaaat
    40621 cattaattct attatacctt aaattaagac aggacaaaac catgaagaaa ctagatttca
    40681 gcttattttt attgcacttg tggctaacaa aaaagccccg caggaaagcg gagcagttaa
    40741 gcttatttat cgtcgttttg taaaactaat tttccagcgt gaatttcttc taacgctttc
    40801 ccaacaaatt tgtcggactg gtagctcggc aatacgcctt tatcattttc cagttgcatg
    40861 tagcgtgcgc gtttagcggc cactgtaact agcgaatatt ttgagtcgat ttttaacaat
    40921 aaattatcaa ttgatggata taacatcatt gtaatccctc caacattttt ttgtagcgat
    40981 gaattactcg ctcagttttt aagtgttctg tttcgacgat gcctttgatt ttttgtacgg
    41041 cgtttgcaac tacatcattc accacagcat aatcataaga cgccatcatt tcgatttctt
    41101 tcttcgctgt ttccatgcgt tcctcgacaa cttccatcga ttctgtaccg cgaccgataa
    41161 tccggttttt aagctcagac aaatctggtg gcgttaagaa aatgaaaatt ccttctggca
    41221 tcgcttttcg aacttgcatt gctccttgta cttcaatttc gagaaaaata tccactcctg
    41281 cggctaattt ttcctcgaca tattcaagcg gagtgccgta ataattaccg acgtactctg
    41341 catattctaa catctttccg tctttgatag cttgttcaaa cacttctcgt gaacgaaaat
    41401 aataatcgac cccgtcttgt tcgccttcac gaggaagacg cgttgtcatg gaaatagaat
    41461 aatcaaaact tgtttccgga tctttaaaaa cagcttcccg aacagttccc ttacctactc
    41521 cagatggacc tgaaagtaca attaacagtc ctctttctgt catcatttcc cctcctgcat
    41581 atcattccac attttgcact tgttctcgaa ttttttcaag cgtcgttttc atttctacca
    41641 cttgttcagt gatttttaga gaacttgctt tggagccaat cgtgttgact tcgcggttca
    41701 tctcttgaat cagaaaatcc agcttccgcc caattggttc ttcgagtaaa ataataccat
    41761 aaaattgctt taaatgactc tttgttcgtt cgacttcttc gttaatatct gccttttcaa
    41821 gtagcattgc gacttcggta agaacgatac ttggatcaaa ttggtcgcct acaacgtttt
    41881 gtaaacgtgt ttcaattttt tcttggtaat gtttttctgt atttggaatt tcagcttgaa
    41941 tgatctccaa acttttctcc aatgcggtaa gatgttgttt gaaataaagc agtaattctg
    42001 ctccttccat acttctcatc tcatccagtc gctcagttgc gcgggcaagt gtttctaaaa
    42061 ctaatcgctc tagttcgcta cttgcttcca cttcttcctc aatagaaaga taggcttgtt
    42121 cttgcagtaa atcagccata gttggtaatt cttgtaattc atatctagcg cttgcttgtt
    42181 taataaaacg gtaatagcta tctgcgaggt cccagtcaat atgtagttcg cgttttgtga
    42241 tttgctctcc cgtgatggaa aagaaaactt cgattctacc acgtttgatt tgcttactta
    42301 tgattttttt taattttcct tctaaataag caagttgttt tggcatccga aaaagaaatt
    42361 cggagtagcg gtggttgact gcttttaatt caatggttac tttgaacgct tcaaattctt
    42421 tcgtcgcacg cccaaatccc gtcatgcttt tcaccatttg gcaagacacc tttcataact
    42481 taaagttccc tctaagatta cttgaaattt gttctgactt cttattatac caaagctact
    42541 ccttgcatac aatacatttt cggaatgtat gttaaaatag aaagtaacta actcacaaag
    42601 gaatgaataa ctaatggcgt ttgatgcaat gtttttaaaa gcgatgaccg aagaacttgc
    42661 cgaacacgga gaaagtggac gtattatgaa aatccatcaa ccgttctcgc atgaacttgt
    42721 tttatatatt cgaaaaaacc gtgaaaataa acgtttactg atctcctcgc atccaagcta
    42781 tgcgcggatt cagtggaccg atgatattcc cgaaaaccca gcaaccccac cgatgttttg
    42841 tatgttactg cgaaaatact tagaaggcgc gattattgaa tcgattacgc aacttcctaa
    42901 tgaacgaatt ttacaattta gtattcgcgg taaagatgat atcggtgaaa atcgtttttg
    42961 tgatttattt gtagaaatta tgggacggca tagtaatatc actcttgtcg accgtgcgaa
    43021 aaatgtgatt gttgattgta ttaaacacgt ttcccctgca caaaatagtt accgaacact
    43081 gcttccggga gcgacttatg ttttacctcc tgcaacggat aaactccacc catttgaggt
    43141 tacttcggag cagattctgg atagactaga tttctcagcg ggtcgaatgg ataagcaact
    43201 tgtacaaaat tttgcaggat tcagcccttt gcttgctcgg gaaatagtat ttcgtgctgg
    43261 gaacttaacg gcagattcgc tagttgccgc ctttttcgaa gtaattgggc tagtgaacga
    43321 gcatttaggc catgcagccg tgccaaacga atggcgcatc caaaataaag aggattacta
    43381 ttttttcccg ctccgccatg tcgatgcaga aacaaccgaa ttcgcgaatt taagcaccct
    43441 attagaccat ttttatattg gtaaagcgcg tcgtgatcgt gtccatcaat ttgcacatga
    43501 tttagaaaaa ctcttatcca acgaactggc tcgaagcagg ctgaaaatcg aaaaactcga
    43561 aaacactttg ctcgaaacag aaaaagcaga tgtttatcgt attcaaggtg aacttctaac
    43621 tgccaatctg catttaatgg aacgcgggat ggaagaaatt actgtagaaa acttttacga
    43681 tgatatgaag aaaatgacga ttgcacttga tactagaaaa acaccatccg ccaatgcgca
    43741 aagctacttt agccgctacc aaaaactacg taacgcggtc gaagtagtga aagagcaaat
    43801 cgcgctcacg aaagaagaaa ttacttactt agagtccgtg gaatcacaac ttgaaacatc
    43861 tggcccacaa gacgtggaag aaatccgcca agaactagct gaacaaggct atcttcgcta
    43921 caaacagaaa aaaggcagcc ggaaaaaagc gactttacct gctccagaaa aatatacttc
    43981 ttcgaccggc ttaacgattt tagtcggaaa aaataataaa caaaatgatt atttaacgaa
    44041 taaattagct aggaataatg aatactggtt ccatgtaaaa gatttgcctg gttcgcatgt
    44101 ggtcattcaa tcgaatgatc cagatgagac atcgattaca gaagccgcaa tgattgcagc
    44161 ctattattcg aaagcgcgcc tttcagcaac cgtccccgtt gacggcacgc tcgtaaaaca
    44221 cgtgaagaaa ccaaatggtg ccaaacctgg ttatgtcatt tatgataacc aaacgactta
    44281 cttcgttaca cctgatgaaa agcttgtttt agagttaaaa aattaacggt tccttcctgg
    44341 agccgttttt tctttctaat tttagggtag atgtgtactg actttacttt tttattggaa
    44401 ggatgataga ggaatgaaaa ttttattaat tggtgcttct ggtacgcttg gctctgcggt
    44461 gaaagaacgt ttggagaaaa aggccgaagt gattactgct ggtagacata gtggtgatgt
    44521 gacggtggat attacgagtg tcgatagcat caaaaaaatg tacgaacagg ttggaaaagt
    44581 agacgcaatt gtttcagcca caggaagcgc cactttttct cctttaacag aattaacacc
    44641 tgagaaaaat gcagtgacga ttagtagtaa attaggtggt caaattaatc tagttttgct
    44701 gggcattaac tcattgaatg ataatggaag cttcaccctt actactggca ttatgatgga
    44761 agatccaatc gtccaagggg cttctgctgc gatggcaaat ggcgcggtta cagcttttgc
    44821 aaaatctgct gcgattgaaa tgccacgtgg aatccggatt aatacagtga gcccgaatat
    44881 attagaagaa tcttgggaca aactagaatc atttttccaa ggtttcgttc cagttccagc
    44941 cgcaaaagtc gctcgtgcgt ttgaaaaaag cgtctttggt gcacaaactg gtgaaagtta
    45001 taaagtatat taatagaaaa agaagctcac cgtaacaaag gtgagcttct ttttattttc
    45061 cccagttttc tggatttttc ttccattctt ttaatgtttc catatcttca ccagtcacgt
    45121 aattttcatt taaagctact tcaattagct catcatagtt cgttaatgtt actagttttg
    45181 tgccagattc ttctagcagt tgttttcctt tagcaagtcc atatgtaaat atggccgcga
    45241 ttccaactac ttccgctcca gcttcttcca gcgcttccac tgcttttaat gaacttccac
    45301 cagttgaaat caaatcttca atgaccacta ctttttgacc tttagaaatt ggtccttcga
    45361 tttgattccc tttgccgtgt tctttagctt ttgatcggac gtagaccatt ggtaaatcta
    45421 gtaaatcact cacccatgca gcatgtggaa taccagcagt tgcggtgcct gcaacaacat
    45481 ctacttcacc aaaggtttgc ttgatttttt cggctaatga cttggcgata aactgacgga
    45541 cttttggaaa gcctagcgtt aggcgattgt cgcaatatat aggggattta attccagatg
    45601 cccaagtgaa aggctcattt ggttttaaaa atacagcttt aatttctaat aattgttcag
    45661 ctacttgttt ttcgatgctc atgcattcca ctcctttaaa acttgattat acgcttctac
    45721 cgggtcgttt gcgcgcgtga tggaacgacc aacgacaatg tttgacgaac caatcaaacg
    45781 cgctttttct ggtgttacga cacgaatttg atcgtcggct gcgtcgcttg ctaatcggat
    45841 gcctggtgtt acacgtaaaa aatcagcgcc attttgttgt ttaatatctt ctgcttctag
    45901 cgcggagcaa acgacgccgt ctaaaccagc ttgtttcgat aaattgctat aatgcatgac
    45961 ggattcaagt agacttgttt ttattaattg ttctgtttgc atgtctgtct cacttgtact
    46021 tgtcagttga gttacggcaa taatttttgg acgtttgcca cttgaagaac ctatttccag
    46081 accttccctg gcagcttcca tcattttctt cccaccagcc gcatgtacat taaccatatc
    46141 tacgcctagt tttgccaagc caatcatcgc acttttgaca gtgtttggga tgtcatgcag
    46201 ttttaaatcc aagaagattt catgatgttg ttgctttatt ttttcaacaa tgattggacc
    46261 gttgctataa aaaagttcca tgccgacttt cacggatagc gtttctcccg aaaatttggc
    46321 taaaaaggtc tctacttctt cgtaagtctg gaaatctagc gcgataattg gtttattcat
    46381 tgatttgctc gctccttttt aagttcttgt agggaagaaa taccgagttc atccattcgt
    46441 tttggtagtt cgctaattaa tttcggacaa ataaatgggt cggtaaaatt catcgtgcct
    46501 actgcgactg catctgctcc ggcaatcaag aattctaata cgtcatctac agtttgcacg
    46561 ccgcccatgc caatgatagg gatattgctt acctcgcgga cttggtgaat catccgaata
    46621 gccaccggtt taatcgctgg gccagaaagt ccacctgttc catttgcgat gattggtttt
    46681 cttgttttta aatcaatacg catgccgagt aaggtattta tcattgtgag tccgtccgca
    46741 ccagcggctt caattgcttg cgcgatggaa acaatatccg ctacattcgg tgataatttc
    46801 acgtaaactg gcacagttgc gacatttttc acggctttcg ttaaacgatg cgcaacatcc
    46861 ggatctgttc caaatgcgat acccccatgt ttcacattgg gacaggaaat attaagttcg
    46921 atggctttca ctgctttcga ttccccaatt ctggcgcaga cttggacata atcatcctcc
    46981 gtcgcacccg ccacattagc gataatcggt gtttcaaatt gttctaaaaa tggcagttcg
    47041 tgcgccaaaa catgctctag acctggattt tgtaagccga ttgcattcag catcccgctc
    47101 gcggtttctg ctactcgcgg agtgggattc ccaagtctag gttctggcgt cacggctttg
    47161 gccataatcg caccaagttc atttaaatca tagtatttgc tatattcttg tccgaagcca
    47221 aaacatcctg atgctggcat aatcgggttt ttgagcgata atccaggaat ttctactgct
    47281 aatcggttca taaactcacc tcatccgcac gaaatactgg gccgtcttcg cacactttaa
    47341 attgtttttt cgcatcatct gcttttggac aaacacaagc gtagcaagcc ccaataccgc
    47401 atgccattcg ttcttctaaa gaaagatatg ttttcgtttc cggaaaacta gctttcacgg
    47461 cctggagcat cgcttttggt ccgcaactat agatgacatc tggttcttct ggaaaattgt
    47521 tcgtgatgtc tgtgacgaaa ccttgtgttc caagtgagcc gtccaccgtc gcaatatgaa
    47581 ctgtgccata tgcattcatt tctttttcat aaaaactatc tttcgcagat tggaatccat
    47641 ttacaaacgt gacttgtacg ccttttccag ctaactcttt accgagttga tacataggag
    47701 ggacaccaat tccacccccg attaaaagag cggtttttgg tgcaggtgtc tggtcgatat
    47761 cgaatccttt tccaagcgga cctaacacat cgatagtatc cccttctgaa agtttactga
    47821 aatctcttgt cccgtcacct tctatccggt acaacagaat gcatgtcttt gcggttttat
    47881 cgtaagaaca aatacttatc ggtcgtctca taagtaaatc agaacgactc ggtttcagca
    47941 ttaaaaactg tcccggtgac atatcggcta cacgttcccc tgtcaaaatt aattcgtata
    48001 ctttatctgc aatttcggtt tgctgaatga ccttcatttc cgtctgtaac acggttccac
    48061 cccgtttctt ctatttaaac acgtgcttta ggttgtttta cttcactggt attcatcgat
    48121 tcgagttcaa aagagcgcga ttccagtaca cgcaagattg cttccgctgt atcgagcgag
    48181 gtacagaccg gaataccatt ttctacagat tcgcggcgaa tttggaagcc atcacgctca
    48241 ggtcgtttac cagtcgttaa tgtgttcact acgagcgtta cttggccatt tcgaatataa
    48301 tcgatcaacg tttcttgatt ttctccaatt tttttcactt gtgacactgg aatgtctgct
    48361 tcttctaacg tgcttgctgt tccttttgtt gccataatag taaagcctat gcgattaaat
    48421 cgtttcgcta gttctaccgc ttcttcttta tcgcggtccg ctacagttaa aagtactgtc
    48481 ccgtagtcat gcatcgttgt cccactcgcc acaaaacctt tgtagagtgc tttttcgagc
    48541 gtcacatctt tccccataac ttctccggtc gatttcattt caggtccaag cgacgtatcc
    48601 acactacgca atttcgcgaa agagaacacc ggcactttga caaaaatttc ttgtttttct
    48661 ggggcaagtc ctggcgtgta accaaggtcg attaagttct cccctaagat aactcttgtc
    48721 gccacattcg ccatcggaat ttcggtaatt ttacttaaaa atggcgccgt ccggcttgag
    48781 cgcggattta cttcaataac gaaaacttct tcgccatcta cgacatattg gatattcagc
    48841 attccgataa tgtttaagcc agttgccagc cttgtcgtat aatcgacaat cgtatttttc
    48901 acttgactgc ttaaacgttg cgctggatat acggcaatcg agtcacctga atgaactccc
    48961 gcacgttcga tatgttccat gataccaggg attaagacgt tttcaccgtc actgattgca
    49021 tctacttcta cttcttggcc gcttacgtaa cggtctacta aaactgggtg ttttggattt
    49081 acttttaccg cattcgtcat ataatgtttt aatgcttctt ctgattctac gatttccatc
    49141 gctcgaccac caagtacata agatgggcgt acaaggaccg gatagccgat gtctgtcgct
    49201 acgttgattg cttcttctac cgatgtggcc gttttcccag ctggttgtgg aatttgtaga
    49261 atttctaatg ctttttcaaa ggcatcacgg ttttctgcgc ggtccgtatc ttctaaactt
    49321 gtacctaaaa tttttacgcc gcgttttgct aaaccgtctg ctaaattaat cgctgtttgt
    49381 ccaccgaatt gcacgacaac ccctagtggc tgttcgatct caataacgtg cataacatcc
    49441 tctagcgtca aaggctcaaa gtaaagtttg tccgagatac taaagtcggt cgaaacggtt
    49501 tctgggttat tattaatgat aattgcttca tagcctgctt gttgaatggc ccacacggag
    49561 tgcaccgttg catagtcgaa ttctacccct tgcccaatcc gaatcggacc agaaccaagg
    49621 acaatcacgc tttctttcgc tgatcgtgtt gactcatttt cctcttcata tgtgctgtaa
    49681 aaataagggg ttgtcgattc aaattccgct gcacacgtat caaccatctt gtatactggg
    49741 aaaagatttt gtgcttttct taagtcataa atcgcttgtt catcgacatt ccaacaagtg
    49801 gcaaggaaag cgtcagaaaa accggcccgt ttcgcttctg ccaaaatttc ttggttttgc
    49861 ggattttctt tgatacgatt ttccagttcg attgttttac ttaatttata taagaagaat
    49921 aaatctatct ttgttttcgc gtggagttgt tcgattgttt gacctcggcg caaagctgct
    49981 gctaggaaga ataaacgatc atcttctggg aagcaaattt tgcgttctaa tgttgcttcg
    50041 tcagcatttt ccgcttcttc aagcaacaaa tggtcagcgc caatttctag ggagcgcact
    50101 gcttttagaa gtgcttcttc ccatgaacgg ccaattgcca tgacttcacc agttgctttc
    50161 atttgtgttc caaggcgacg atccgcttgc tcaaatttgt caaaagcaaa gcgtgggatt
    50221 ttcgcaacaa cataatctag tgttggttcg aaatgggcaa aagttgttcc tgttactgga
    50281 tttctcactt catccagtgt taagccaact gcgattttag ctgcaagttt ggcaattggg
    50341 tagccggtcg ctttggaagc tagcgcagag gaacggctca cacgtgggtt tacttcgata
    50401 acatagtaat tataactatc tggatcaagt gccagctgaa cgttacagcc gccttcaatt
    50461 tctagtgcac ggataatttt caacgacaca tcgcgcaaca attggtattc gcggtcggaa
    50521 agcgtttggc ttggtgcgac aacaatcgaa tctcctgtat gtatgccgac tgggtcaata
    50581 ttttccatgt tacaaacaac cattgcgtta ttgttcgcat cacgcattac ttcatattcc
    50641 acttctttaa aaccagcgat acttttttct agtaaacatt gtgttactgg actcagtttt
    50701 agaccacttg tcaccgtttc aattaattct tgttcattgt ggcaaatccc gccgccagaa
    50761 ccaccaagcg tatatgccgg gcgcacgata actgggtagc cgatacgttc aacaaaagta
    50821 tacgcttcgt ccaaattatg aataatgtca ctttctggca ctggttcccc tagttcattc
    50881 atcaagtccc ggaaagcttc acggtcttcc gcttttttaa tcgccgttaa atctgttcct
    50941 aacacttcta cgttacattc atccaaaatc ccagcagctg aaagttccat cgccatgttc
    51001 aatcccgttt gtcccccaag cgttggcaaa atggcgtccg gacgttcttt acgaataatg
    51061 cgcgatacaa aatcaagcgt aattggttca atgtaaactt tgtccgccat ttctgcatcc
    51121 gtcataattg tcgctggatt tgagttcact aaaactaccc ggtacccttc ttctttcaaa
    51181 ctcaggcatg cttgtgtccc agcataatcg aactctgctg cttgtccaat aacaattggg
    51241 ccagaaccga ttactagaat tgtttttata tcgtcacgtt taggcatgta gttcaccctc
    51301 ctctttccca ttcatcattt ccataaattc atcaaataag tagttgacgt cacttggtcc
    51361 tgggtttgct tctgggtgat attgtactgt ataggctgga tattctttat gtgccagccc
    51421 ttctaccgtt tcatcattta attcaatgtg tgttactttt aaatctgttc caataagtga
    51481 atctttttct actgcgtaac cgtggttttg tgcagtgaaa tcaacacgtc cagtggctag
    51541 ttctttcacc ggatgattcg cgccacgatg cccgaatttc agtttaaatg tatctgctcc
    51601 gttcgcaagt gcaaacagtt ggtgccctaa gcaaattccg aatagtggga gcttgccttg
    51661 aatgccgcgt atcatttcta atgcttctgg cacatctttc ggatccccag gtccattgga
    51721 taacatcacg ccatccggat gcattgcaag aatttcttcg gctgttgtgt tgtaaggaac
    51781 aaccgtcacg taacagttac gtttattcag ttcccgtaaa attgaacttt tcacaccata
    51841 atcaacaagc accactcgtt taccatctcc tgggcttgca aatgctttag cagaggaaac
    51901 ttcatgtact tgatcgactg gcaaacgtac agagcgcaag tggtgtagca attcctcttt
    51961 gtttgcagtt tctgctgcta aaatgccttt taacgttcct tctttacgaa ttagtttcgt
    52021 tagtttacgc gtatcaattc ccgcgattcc cgggatgcct ttttctttca aaaaatcatc
    52081 taaagtaatt tgattgcgcc agttggaagg gaattctgca gcttcacgaa ccacaacccc
    52141 tttcacagca ggattgatag attcaaaatc gtcgcggttc acaccgtaat ttccaacaag
    52201 tggatacgta aaagtaataa tttgaccata gtacgaaggg tcagtgattg tttcttggta
    52261 gccagtcatt ccagtattga agacaacttc accaatggtt tctttttcac taccaatcgc
    52321 atcaccgata aaataattgc catcttctag cattaaaatt cgctttgtca tttaatttcc
    52381 ccctcattgt atacaagtgt gccttccgaa aacgttgcta ctggccatcc aatacacgtt
    52441 tctcctacaa atggtgtgtt ttttcctttt gaataaaaag tagctgggtc aatattcgct
    52501 tctttttcta aatcaagtac gacgatatct gctacgctgc cttcttctaa tttcccgtat
    52561 gggagtttaa agcattccgc tggttttaca gtcatccagt cgattagctg ttttaatgtc
    52621 cattcgttcg ttttaacaaa atgggtatat agtaatggga atgccgtttc tagacctaca
    52681 attccgaaag cagcttgctc catcggtaca tttttttctt ccgctgcgtg tggagcatga
    52741 tcagttgcga taaaatctat cgtaccatcc agtaagcctt ctaaaagtgc cgcccgatct
    52801 tctttgctac gaagtggggg gttcattttc caattaccgt catttcctgg aatagcttct
    52861 tcatctaaaa ttaagtgatg tggtgaaact tcagcagtga cacgaattcc cgcccgtttt
    52921 gcatctcgca caacacgaac agattctttt gttgaaatat gacagacatg ataatgacaa
    52981 cctgcagctt ctgctagtaa aacgtcacgt gcgatttgga cagattcagc aatattcgga
    53041 atacctttca gaccttcttt ttcagcaaaa atcccgtcat ggacaacgcc accatagata
    53101 agtgagttat cttcacagtg agccacaatc gccatatcta gtgctgctgc tcgtttcatc
    53161 gcttcataca ttgttccagc taactgcacg cctaccccgt catctgtaaa agcaaatgca
    53221 ccagcttctt ttaaagcttc aaaatcaact aattcgtccg ttccaaggct tgttgtaatc
    53281 gaagcatatg gtaacacgcg aactttcgct gtttctttaa tttttgcttg taaactttcc
    53341 attacttctt tggaatctgg aacaggtttt gtattcggca tcgaacaaat tgtcgtatag
    53401 ccaccgcgtg ccgccgcttg tgttcctgtt aaaatggttt ctttatgttc cccgcccggc
    53461 tcacgaagat gtacatggac gtcgataaaa cctggggcaa ttaatttccc tgtcgcatca
    53521 aattcctcgc cgcttgttac ttcaatggaa tccgcaatca aattgacttt accgttttga
    53581 ataagtacat ctttgttttc cagttcacct gacgcgttta atacttgccc attttttaat
    53641 acgtacataa tttcgccctc atttcctgtt cttttaaaat agcttccaaa atggccattc
    53701 ttataaaaac gccattcgtc atttgcgtaa caatgcgtga tttttcgctt tctactaaac
    53761 tatcagcaat ttccacatct cggttcacag ggcttgggtg cataatgatt gcatcttctt
    53821 ttaactgctt tgcccgattt tccgtcaatc caaatttttc gtggtagctt tctttcgtaa
    53881 actcatctgt tccactatgg cgctcatgtt gtacacgcaa aagcatcaac acatccactt
    53941 tttccacaat ttcatcaacc gataagtaag tgccatatgc taagtaactt tcgtcgaacc
    54001 attctctcgg tccggagaaa aacagttccg caccaagtct ttttaacact ttcatattgg
    54061 aattggcaac tcgactgtga cgaatatcac cagcaatcgc tactttcaaa ccctgaaaag
    54121 taccaaattg ttcttttatt gtaaataagt caagtagtga ttgactcgga tgttcaccgc
    54181 atccatcacc gccgttcaca atagcaatgt ctaatttttc gagtcccgca tagtaatttt
    54241 cttctgagtg tctaatcact gcgacattga ccccgacggc ttgcattgtg agcagtgtat
    54301 cgtagagcgt ttctcctttt gtcatgctag agctcgctgc atcaaaagaa acaacctcca
    54361 cacctaactt tttctctgct acttcaaaac tcgtatgtgt tctcgtactt ggttcaaaaa
    54421 acatattgac cgcgaaagtc tgttcattaa aagtcgcttt tttcccgcgt ttaaactgtg
    54481 ccgcctgctc taataaatgc tcgatttcat ggacggttaa tgcttccatt gacaacaaat
    54541 ttttcattta aagcgccacc ttttctactt cattttatag aaaaacctct gtaaattttt
    54601 tgtctgcaga ggtttttttg tcatgtgtta tgctgatctg tgctcggctg gtaatactaa
    54661 gtttaagata atcccaataa ctgccgcgag cgccatacca gatagctcga acgttccagc
    54721 tttaatgaat aagccgccaa ttccgactac tagtacaacc gaagcaataa tcatattacg
    54781 attaacactt aaatcaattt tattttcaat catcattcga agtccactcg ttgcaataac
    54841 cccaaagagt aacagggaaa tgccgcctag aactgctgta ggaaccgagg tgataactgc
    54901 attgatgtaa ccgataaatc cgaagaggat tgcgaaaact gccgctcctc cgataacaaa
    54961 cacgctatat acttttgtaa ttgcaagaac gccaatgttt tcaccgtaag tcgttacagg
    55021 tggtccgccg atgaacgatg cgataatcga agccgtacca tctgcaagta aggaacgatg
    55081 aagtcctggg tctttaaaga agtttttatt cgtaattcga ttaagtagta attgatgccc
    55141 catatgttcc gccattgtga caaacgcaag tggcgccata cttagaatga ccgtcacggt
    55201 aattactggg tcgatattta caaatggaat gctgaaatct ggaatttgga agaaagaggc
    55261 atttttgatt aacgtgtaat ctaccatccc aaaagccata cttgttaagt aaccgactgt
    55321 gaagccgaac aaaattggaa tcaagcccat aaatcctttg aaaaacatca ttgcgattat
    55381 ggttgcaagg agcgtaatta ctgctactgc caaagtttct aaactgtatt taccattgtt
    55441 tgttcccatc gccatcgctg ctgcacttgg agcaagcgac aaaccgataa ccatgattac
    55501 tggcccaaca acaattggtg gtaaaacctt ttgaatccag tcaacaccag cgtagtaaac
    55561 aattagagaa acaatcgcat atactacacc gacggagaac gttccgacca taactgcgcc
    55621 cggacctccg ccagatttgg ctgcaagtag tgcagtaatt ggtgcaataa aggtaaagga
    55681 agaacctaga tatgcgggga ttttcccgcg agtaattcct agataagcaa gtgtcccgag
    55741 tccgctagat acaagcgcca ctcccggact taaccctgtc acacttggca caaagatagt
    55801 agagccaaac atggtgaaaa ggtgctggat gctaagaata atccatttat tgaagcttgg
    55861 tctttcgtgt atatctagta ctggttttgt cactgtttct gtcgtttctg tcattttctt
    55921 ccctctttct tcataaaaaa taccccttgt ctgtgtcgac aaagagtata gaataatccc
    55981 ctatagaaat taatcactct ttgtcagcct cacaggactg cttttaaaaa agtgttacat
    56041 tgttattcat ttttgttaat aataaccgca tcttcttcgt tgtccacatc ggttaggcga
    56101 acttctactc gttcgtttcc tgatgtcgga atgtttttcc ctacataatc tgctctaatc
    56161 ggtagctctc tatggccccg atcagcaagc actgcaaggt gaatttgcgc aggtctacct
    56221 acatccatta atgcgtccat tgcggcacgc acagttcgac ctgtataaag cacatcatct
    56281 acaagaacga ctttttttcc attaatatcg aatggaatgt tcgtcccatg tacagcgggt
    56341 tcgcgagtct tatcatcttt gaaagataaa tcatctcggt aaagtgtaat atcaatatct
    56401 ccaactggaa catcaatacc ctcaatttca agtatacgct tatgcaaacg ctctgcaaga
    56461 tagataccac gcgtcttaat accgacaagc gctaaattct tcgtgccttt attccgctcg
    56521 atgatttcgt aacttactcg agtgagcgca cgtttgattg ccgcctcgtc catgacaact
    56581 acttgttttt gcatccgaaa tctctccttt tgtgcaaaaa aataaccctc tgccagtgta
    56641 agcaagggaa cgcgtacgag tatacaatta acccgtcaaa ttatcgtcac cttcttagcc
    56701 tctctggact atgttaaagg actttatttc attagactta tcttaactga tagaactctc
    56761 cttgtcaatc aaaaaaaaga aaaacatgtt atactattaa taataaaata aaggaggcca
    56821 aacatatggc tatatctaaa gcaaaaaaga aacgtcaaaa gctcatacgc gaaggtcatt
    56881 tgaatcctga aatcaagcgt agcccctttg cactcatcga tttaagttcc aaacaaacaa
    56941 aaacgaaaaa aggatatctt tatagtaaga agcggaagaa tcaccaagaa gatgattctt
    57001 tttttgtgta tttttttaag ttttcacatt ttctacatat taacaacttg aaatagtcta
    57061 cttttaccag aaattagtcc aatttaactg ctctatgtgc tatgctgaaa tagctaaaaa
    57121 catggactta agaggtgaat acaatgggca taatgaatag cttattacaa cagaaagaaa
    57181 tggtcgtgaa agattggcta acgtattatg tatctgtgga tgatccatat atcttcacat
    57241 taaaaaatga tcatcgttta atggatgaaa cgggctttgt tttagaaaat ttgtttattg
    57301 gaatgactga agatttagga aaaatgaatg ctttcgcgcg tgagcttgga aaagcacagt
    57361 ttattacttc actcggaatt tctcgtattt tattccatat tcgcttactg gaagagtttt
    57421 tgctcgatta tgcatcagaa atcaaaacaa aatctgctaa ttatcgtgaa ttatatttat
    57481 ttagcatcaa gcttcatcag gtatttagta gtttcacgca aaacttaatc gaaggctata
    57541 cccgtgcaaa tgaacaaaag attatacaaa aagaaaacca aattattaaa gaatcaacca
    57601 aactaatttg gattgccgaa aatgtttttc tgttaccttt aattggaaga attaccgatg
    57661 agcgagcaaa acaacttact gaaacagcgc ttgttgaagt ttgtgagcaa ccagtgaact
    57721 atttaattat cgacttatct ggcgtgcagt tagagtctcc taacatcggc aagtacattg
    57781 agtatttctt ctcgtcgctt aaattagtag gtgtaactcc gattattaca ggtatgcaac
    57841 cgcaaactgc caaagtgatg gttcaagtta atttaactga acaacatggt attaaaacat
    57901 ttgcaacctt acgccaagca acaaaaacac ttatgaaaga aaaagaagca agaaacgccc
    57961 gtaaataggt gttcttgctt cttttttaat attcttcttg acgtaatgat tttaaagctt
    58021 tttcaaagga actaggaagt ggcgcttcaa acatcattcg ttctttcgtt gtcggatgat
    58081 caaaccctaa ttttgcggca tggagaaatt ggccattgcc tttgattgta tttttaggtc
    58141 cgtattttgg atctcctgct aaaggatgac caatatattt caaatgaact cggatttggt
    58201 gcgtacgtcc agtgtctaat ttgcaattaa ttaatgtgta acctggtaaa cgctctaata
    58261 cttcaaaatg cgttctcgct tctttcccat cgcgtacgac tgccattttt tggcggtctt
    58321 cttttgcacg accgattggc gcttcaattg ttcctttttg gtggacaatg tcaccgtgga
    58381 caagtgcgat atattctcta tccgaagttt tgtcttttaa ttgtttggct agtgattcat
    58441 gggcatggtc atttttagca accattaata agccagatgt atctttatca attcggtgaa
    58501 caattcctgg acggatttta ccgttaattc ccgataaatc atcacaatgg aatagtaaag
    58561 cattcacgag cgttccactt gcatgtcccg cagatggatg aacgaccatt ccttcaggtt
    58621 tatttacaac aagcatatct ttatcttcaa aataaatatc gagtggaata tcttctgcta
    58681 aaacttctag ttcttctggt tcacgcactt cgtaatgaat ttcatcgcca acttgtactt
    58741 tgtaatttgg cttcgcaagt tctccgttaa ccgtaatatc accgtttttc agcatgagtt
    58801 gtattgctga acgacttttt cccatcattt cggcaatcac tttatccaca cgttcacgcg
    58861 catgactttc ttctataatc aatgtttcat tctgcattat ttaattcctt tcgtttttcg
    58921 gtcgtctaca aaaacataca cgagcattag tacgacacca actgaaagcg cggcatctgc
    58981 cacattaaag attgggaagt aataatttcc ccatactgtt tgtacaaaat ccactacttc
    59041 ttgatgcaag actcggtcga taaaattacc aatcgcacca cctagaataa acgctaaact
    59101 aatagaaaat agtcgctttc ctttggcata tttttgcata atataaatta taattccaat
    59161 aacaacaaca gtaataagat agaaaaacca catatgtcct tccaaaatac tccaagccgc
    59221 cccgtcatta cggtagcttg tccagtataa gaaaccagga ataacttcta ttttctgtcc
    59281 aatttccata ttttgaacaa caatccattt agttaattga tctagcgcaa tcactgctag
    59341 ggtgattaga taatagtaca ttttccgaac cctcttttca catcagttag ataaaaagta
    59401 cgcgctcccc tttaaaaata agaagagcgc atcacttctt tgttattgta tgataaattg
    59461 aagcaaaaat aaagctgcaa ttacatacat gactggtgaa gtacgttcct catttttcgt
    59521 gaaagcacga aggattggat acgcaatgaa accagctgca attccgtctg caatactata
    59581 cgtcagcggg attaacacaa taatcagtag tgctgaaaaa gtttctgccg cattcgataa
    59641 atccatttct ttaaattctt gcagcatcga cataccgata ataattaaaa tcggcgcaat
    59701 cgcactgttc ggaataaaag ataataccgg cattaagaaa agggatgcga taaagaacag
    59761 accagttgtt attgttgcta aaccagtttt tgctccactc gcaaacatcg agccactttc
    59821 aagtgcagag atcgttgggc ttgtaccaaa taagccagat aaaaaggctg tcagtgagct
    59881 agcttttaaa atgcgtggta atttttcggt ttgcttcagt tgccttactt gtccattggt
    59941 aagtccaact gtttcaaaca caataaccat cgtcatcgta aagacggcac tccaaaaacc
    60001 aacgctcgcc attccggaaa aatcagcttt aaagagtaca tcactccacg gtgcaacgct
    60061 tatcgaagca cctccagctt tcccggcaac accaaacatc acaccaacga ctgtcccgat
    60121 tattaaactc cataagaaag cgcctggaat ttttcgaata actagaatca tcgttaatag
    60181 tagtgttaca agtgttgcta atacgaatgg atcgcctaaa tctccaacgg caataatagc
    60241 atgtttcccg cgcgtgacga ttccgccctt ctcaagccct aggaagatta agaataaacc
    60301 taacccaacc gtaatcgctt gttttaaaat gagcggaata gcttcattta gttttcctgc
    60361 aagtggtgta aacgcaagaa tcataaatag taagccactc atcgtaacag cagcgagtgc
    60421 aacctgccaa cttagtccca ttccttgaac aagggtatac gcaaacagcg cattaatccc
    60481 catcccaggc attagaataa gcggtgcatt tgcccaaaat cccataatca aacaacctaa
    60541 cgccgaaata aaaatcgtcg caaggactgc tccttgataa ggaactccag cctccgctaa
    60601 aatcgagcta ttgacgacaa taatatatgc caccgtaaaa aagccaatca taccagccaa
    60661 aaattcggtc cggaaattgg ttttatgctc gttcagccga aatactttgt tgaaaaattt
    60721 ctgcatactt tttcctcatt atgaaattgt ccctctccca acccgcagag tattgcccct
    60781 gccacagaac tttattataa caaagatagt acatatacga aaggaaaagt tttttgttac
    60841 gccgccagaa cgccttattt atgctataat ctgaatggat gcaaaaagga gatgattact
    60901 tgcaaaaaac agtcacatat ggggcaaaat ggaaacaatt tttaacgata ttcacaccga
    60961 ttgtcattac gcaactcacg cttttctcta tgacattttt cgatacgacg atgagcggaa
    61021 attattcaaa tcaggcactg gctggtgtag caattgggag ttcgttctgg gctccagtaa
    61081 atgctgcttt ttctgggtta ctgatggcca tcacgccaat catcgcccaa ttaatcggag
    61141 cgaagaaaga aaaacaagtc aaaaacacgg tgcataacgg tctatatatt gctttatttt
    61201 tagcttttat tttaattctt attaattttt tggtcgttcc aacgattttg acacacatgc
    61261 ccgttacggc agaagtcgcg gggattgctc gtcatttctt aaatggcatt tgtatcggaa
    61321 tcccggcttt ctttatttcc gcgattttgc gttcttttat tgattcgctt ggtttaacta
    61381 gggtaacgat gctcattaca ctttgtacag ttccatttaa tatcttttta aattactgct
    61441 ttatttttgg aaactttggt tttccggaaa tgggtggagc tggtagtggt tacgcgacag
    61501 ggattacgta ttggctcgtt gttttagtta gtgttatttt gattcaaaca caaactagat
    61561 tacgaaaatt tggtattttc aaagggctta cggcacttcg tttttctaag ataaaagaga
    61621 tcatcggcat tggcgttcca aatggtttga caattttatt tgaaacgagt attttctcag
    61681 cggtaaccat tttaatgggg gcctttggga cggagacaat tgcggcacat caatccgcaa
    61741 atagtgtctg cacactgctc tatgctttcc cgcttagtgt tgcttcaacg ttgaccattc
    61801 ttggcgggta cgagacaggg gcaaaacgct taaaagatgc caaacagtat cgtcatattg
    61861 gtatggctgc tgcgattttc attggttgtg taaatggtgc aatcctattt ttcttccgcg
    61921 atattattgc tggtttttat acgaacgatc ccgctttgag caatttaatc atgcatttct
    61981 tagtttacgc gatattgttt caatttgcgg atgctgtcct gtcgccagtt ctcggggcac
    62041 ttagaggata taaagatgtt acggtcacct cgattgttgc ctttatttct tattggttga
    62101 ttgggcttcc agtaggctac ggtttatcgt ttacgaatct tggcccattc ggttactgga
    62161 tagggttaag tactggcctg tttgtcgccg catttatttt atccattcgg gttcgtaaaa
    62221 cggagcaaaa actttctttc aacacaaaag acgcagagat ttcgagttaa tctctgcgtc
    62281 tttttttatt tggctaaacc atcatgaatt ttatctaaat tgtattgcat catttctaaa
    62341 tacgtgtcgc ccacttcacc ttttttagca gtggagtccg tgaagatttt tgcgaaaatt
    62401 ggtacgcctg tttctttaga tacactttcc atactacgtg gatctacgct tgtttcgaca
    62461 aataaattag gcactttttc tttttccacg ataccgacaa tttgtttcat ttggtctgga
    62521 gtaccttgac tttctgtatt tatctcccaa atatatgctg cttttaatcc gtagcgagct
    62581 gcaaaatatt taaaggcacc ttcgctagtt actaatgttt tttgattttc tggcaaatct
    62641 gcaaattttt gttttgcttc tttatccaga gtagctaatt tgttgatata ttttttcgca
    62701 ttctctttat aaaaatccgc attgtctgga tccgctttta caagtgcatc acgaacattt
    62761 tcagtataga taattccgtt atgaagatca agccatgcat gtggatctgt ttcagacgtc
    62821 ttgccttttt ccgttaagta tttgggtttt acacctttac ttaactccac cacttgctcc
    62881 ttgtcgtctc ttgatttatc cgccgtttct aacatacgat caaaccaacc attccctgtt
    62941 tccaaattca atccattgta aaagattaaa tcagcatccg cagcactttg aatgttggct
    63001 ggcaagggat catattcatg tggatcaacg ccaacaggca caatactatg cagttcaatt
    63061 ttatccccgc ctacattttt tacaatatct gctaatatcg aataggtggc tacgacattt
    63121 aatttgccgt ctgttttttt cgaatcgcta ttttgactgg aacaccccgc aagcacaact
    63181 actaatgcga aaagagctac aactattatt tttttcattc gataacctcc ctttttttag
    63241 aaaatagcaa accttgtttc ggtgcgaata aaaaggcaat aaagaaaata atcgtcgcaa
    63301 ctaaaaccat cgccgcacca gatgctaagt tgaaaatgta actaaagtaa agtccgataa
    63361 tcgcactcac tgctccaaat gtagaagcta aaacaatcat tttggataat ttattcgtaa
    63421 gcagataagc tgttgcagct ggcgtaatta acatcgccac aactaaaatg attccaaccg
    63481 tttgcaaagc ggaaaccgtt acaagtgtta aaagtaacat caagaagtaa tgcaagaatt
    63541 tcacattgag accatatgct tctgccatca ctggatcaaa tgaactaact agaaactctt
    63601 tgtaaaatag ggctactaat gaaatcacga taatggcaat aataatcgtc atccacatat
    63661 ccgaactccg caccgcaagc acatttccaa ataaaatatg atacaaatcc gtactacttt
    63721 tcgcaaagga tattaaaata atacctagtg cgaaaaaagc gctaaacaca ataccaatcg
    63781 ctgtatcatt ttttatccga cttttttgat taacaaaacc gattccaagt gccgctgcaa
    63841 tgccaaatgt agctgcacca ataaagaagt tcatacccat catataagaa atcgctactc
    63901 ctggtaacac cgcatgagaa atcgcatctc ccataagcga catacctcgt aaaataataa
    63961 aactaccaat aacacctgaa acaatgccaa ctgtcacaga agtaataagt gccttttgta
    64021 aaaaactata ctgcattaat ccttctaaaa acaacatcta ttacaccccc gtcgcaaatg
    64081 ccaccggtgc gtcaccgtaa gcaaattgaa ttttctcttc tgtaaatgtt tgctccactg
    64141 gaccgtgcgc gactaacttc ttattaagta aaatgatatc gtcgaagtaa gcagccactt
    64201 tatgaaaatc atgatggacc acgacaatcg ttttcccatt atctcttagc ttttttaaca
    64261 ggcgcataat cagcgcttca ctcgtcatat caatacctgc aaatggctca tctaaaaaga
    64321 aaatttccgc atgttgggca agtgctcgtg cgataaaaac acgttgcagt tggccgccag
    64381 atagctctcc tatttgtctt ttcataaagc ctgtcatttc tacttgttct aacgcatcta
    64441 atgcgagttg tttctctttt tttccgggac gcttaattaa tccgagcgct ggatacgttc
    64501 cgagcaacac catatcaaaa acggtaattg ggaaagttaa atctacttca ctccgttgcg
    64561 gtacgtatgc gattttcttt ctccaatatg taagtggttt gtcagccaat gtgacctgcc
    64621 cttgttcacg cggaattagt cccatcattc cttttaataa ggttgattta cctgctccat
    64681 ttggaccaac aatacccgtt agttttcctg atgctatttg aagtgtgaca ttatcaattg
    64741 ccaccttttg tttatacgct attgttaaac cttgaatttc catctaaacc acccttttcc
    64801 cacaagacta atttttacac ataactaaaa atgtttccta agagcaactt tagttcaaag
    64861 tataacggag aatctttttc ttgtaaagta aaatgttcaa aaaaatcccg tagtcgatta
    64921 aactacagga ttttcactat tattatttaa ttgatccgtc tgctaatttt ttgagcagtt
    64981 tgcggaattc tgcttgttca tactcagaaa aaacagcaaa acgttttaca atcatttctt
    65041 ttttcttttt atcaatttct ttgacaaatt cctcggcatt tggggttaat ttcagttcaa
    65101 taattcggcg gtctacttct gaacgatgtc gtgtaataaa cttttcttcg actaaagtat
    65161 ccgtaatggc tgtgatgtga ctggctgaaa catcaagcgt tttagctaat tctgatgttt
    65221 tcgtaagtcc acttgaaatc aagctcaaga cccgatactc gctaccactt aaccttttgt
    65281 cgagtactgc ctctacttca tgacgaaaac tattaaaaat ccgcttaatc aatgtttcaa
    65341 tttctaagta tgtttccatt ttcgctacct ccagtttttc aaaaaagtcg tacgtttact
    65401 tcaccaaggc ttttgctttt tgtagttgtg gatctgtttc ttttagatgt ttttgtgtta
    65461 attcgactaa tttatcggtt gttacacctg tcataattcc tgtcacatct aatttatttg
    65521 ctgcttggaa tctttgaaca gcatattctg tgtctgtatc gtataagcca tctactttcc
    65581 caacattgta atctagtgct tttagcaatg tttcaatggt tttaacatca tcaccgaaat
    65641 cgccattttt gtagactttg gtggaagacg ggatagtcat agttgcataa tctggcatgt
    65701 tcacaactac atctggcgta ataccttttt catgaatcca ttcgctatta ggtgttaacc
    65761 attttgcgac agttaattta agcgtggagt catcagataa agttgttgcc gtttggaccg
    65821 tacctttacc aaatgatttc gtgccgacaa gtttaatgcc accagattct tttgctgcag
    65881 cagcaaggat ttctgaagca cttgcactac caccatctat taacatagtt gttggtactt
    65941 ttactttata atctccatgt gagctactat ccgctttaat ggctgattta tcaccgtctt
    66001 tgtcctgctc ttgtacaaca attttgccat cgggaacaaa gaggctagaa atcgaaactg
    66061 cttgatcaag taacccacca ggatttcctc gcaggtcaag aacaaggccc ttcatgccat
    66121 ctttttcaag ggatttcaat gccttttcaa gctcatcata ggttgtttct gaaaatgtac
    66181 taatggtgac gtgcgcaatt ttgtcactgc ccatttcttt gtacaccgtt tcgattggaa
    66241 tttcatcacg agtaatcgtg acatcaaatg gtttatcttc gttggaacgt tgaatggtca
    66301 gggttacttt ggtgcctttt tcaccacgga ttttttgtgt tgcttctgtt gctgtatcgc
    66361 ctttaacaga cttcccatct acttgtgtaa taatatcttg tggccgtaaa ccagcttttt
    66421 cggctggaga gtttttgatt ggcgaaacta ttacaatagc cccatctttt tcttgaatct
    66481 ccgcaccaat accttcaaaa ctagcagaaa ttgtatcgtt aaactctgaa gattcttttt
    66541 tcgacataaa tgtggaatat ggatcatcta atgaattgac cataccattt attgctccat
    66601 ctatcatcgt tgtagatttt gtatctttat aatatttgct tgtaatttcg tcgtatacat
    66661 cgtagagctt ggtaaattct tttcgttctg gaatgctcac ttttacttgc ttgtcatccc
    66721 ctaaagacat tacgattgta gtcactaatg ccgtcacaaa aacaaaagcg aatagtagca
    66781 ttataaatgg gaataacttc atttttatat aaccattgcc gggttttgct ttttgttctt
    66841 cgtctttctc cacgttattt ggttcgtttt gtggggattc ttccatcttt cttcaccact
    66901 ttctatgtaa aatgtggcta gtaatagcac attttattta actcatttat tttaccagtt
    66961 ttccattcat tttggtatct ttttttcatg ctacacaaaa aaggaggatt ctggacagaa
    67021 tccccctttt cgcttttaaa ttaagctact tcataacctg cttcttccac agcatcaatt
    67081 aacgcatctt ctgtcacttg tcctttttca aactcaacag tagctgttcc ttcatcaagt
    67141 gatactactg cacttttcac gccattaact tctgataaag cttttgttac gcgagcctcg
    67201 cagtgagaac aagtcatacc ttctacattt aatgttaatt tttccatgtt aaattcctcc
    67261 tatgatttaa atttatatct ttttaagcga agtgcgtttg tgacaacaga aacggaacta
    67321 aatgccatcg caagtcctgc tacccaaggg gcaagtaagc ctagtgccgc aattggaata
    67381 cccgcacagt tatatgctag cgcccagaaa aagttttgac ggatgtttcg catggttgct
    67441 ttggaaagtt cgattgtttc tggaatgagt gttaaacgat gacttacaag tgttacatct
    67501 cctgtttcaa tcgcaatgtc agttccagta ccgatactaa tcccaatatc acttgccgca
    67561 agagctggag catcattaat gccatcacca acgaatgcaa cgatatgacc gtcttgctgt
    67621 aatttctcga ctaaggcgct cttatcattt ggtagttgtt cggcaaagaa catatcaata
    67681 cctaaatctt tagccatatt ttctacgaca acagattggt ccccagaaca aattgctgtt
    67741 ttaatacctt gtgcttttag tttttggata gcttcttttg cttctggtcg tggtgtgtca
    67801 gataaagcga gggcacctgc gtatacacca tcaattgcca ttgctacgac tgtttttcct
    67861 gcatgcatcc aactttcgat taattcatca tcttcttttg gaatcgttgt aagggaagaa
    67921 acatagcggt aagcacctag ttccacttta ctatcatcca gattaccggt catgccgtgc
    67981 ccagctttcg cgcggatttt cccttgtttc actgcggaag catctatatt ctctggctct
    68041 aacatcttaa taatcgcttt cgcaatcgga tgctctgatt gttgttccat taagaataaa
    68101 taagggaaaa agtgatcatt ggctgctttt ttatcactca cttctagttt accttctgtt
    68161 aaagtaccag ttttgtcaaa aacgatagta tccactttgg aagtacgttc taaatgttcg
    68221 ccacctttaa ataatatccc actttcggcg cctttaccag ttccagccat gatagcggtt
    68281 ggcgttgcaa gaccaagcgc acagggacag gcgataacta ataccgcaat cgcagcttca
    68341 agtgaaccat ccaccgttcc agtaacaaga taccaaataa taaaggttac agcagcaatc
    68401 ccaagtacaa ttggtacaaa tatgccggaa attctatctg ccaaacgttg aattggcgct
    68461 ttaatacctt gcgcttcttc caccaaacga ataatggatt ctaaaacggt ttcttccatt
    68521 cgtttcgtaa tttttgcttg gaaagccccg tcaaagttaa tcgttgcgcc aataacagaa
    68581 tcgcctggtt tcttctctac tggtacaggt tccccagtaa tcatcgcttc atcaatactc
    68641 gtttcaccag aaataatttc ggcatccatc ggaacttttt cacccggacg aacaaggata
    68701 atatcgccaa ttttcaatga atctactggc actaaccatt cttttccttc tcgaataacg
    68761 gtcgcttctt ttgcttgtaa ttcaagtaaa ccagcaatag attcggttgt tctcgatgtt
    68821 gcgtatgatt caagtaattt acctaacaag attaaggtga ttaacacagc acttgtttca
    68881 aagtagtaat gcggcatcac gctcggatca atcatgtgac gaatgtattc cactacacta
    68941 tagaaataag cagcagaagt cccaagtgcg actaatacat ccatatttgc acttttacct
    69001 cgaagcgctt tataagcccc atcataaaac cgccaaccaa tataaaactg aacaatcgtt
    69061 gcgagtacta attggatggt tggattaatc cagttaccaa tcgtttccgc aaacgccatt
    69121 tcatgaatgt acggaatatg tgtcaccatg gtaagaagta atggtaagga aagaaccgcc
    69181 gaaagaataa aacgtctcac ttcttttttg aaattctttt ctaacacagc atctttttct
    69241 tctttagaca ttttttccgc cgcgtcataa cccgcatgtt taacaacttt aattaaatct
    69301 tctgtcgatg taacttccgg gtcgtaatat acggctgcat tttccgttac taagttgaca
    69361 ttcgcttttt ctacaccatc cgctttattt aacgattttt caattctcgt ggaacaggcc
    69421 gcacaagtca ttccaaaaat gtttaaatct tgtcttacat atttatcact catcgtatat
    69481 acccccctca ggttttcgaa aattgacgta ttgctttaag taagtcctcc attacgtcat
    69541 cttccccatt ttttgctgca tctacaacac agtgtgctgt atgatgttct agtacttgta
    69601 aaccaacatt tttgagcgct ttattcgctg ctgaaatttg aactaaaatg tctgtacaat
    69661 atctatcatc ctcgaccatt tgagcgatac cgcggatttg gccttcgata cgtcgcaaac
    69721 gattttgaag taatttcgtt tcatcttctt tgcgtggaac aattggttga tcgtgtttca
    69781 ttttttctcc tcctttgttt ctacaattaa cagtataccc cctataggta ttttatgcaa
    69841 ccatttaatt tctgagaaca aaaaaaagcc ataaacaaat gcttgtttat ggctcaaaat
    69901 cttgttattt cgcggcatct actttctttt gaagtgcctt aacatgttca aaaaattctt
    69961 ctaaagtcca gttgttttcg taaataatcg ttgccgcatc cttaccaaca taacgataat
    70021 gccaagattc atattgatac ttcgtgatag cttctcgccc tttcatataa cgcaagataa
    70081 aaccataatt gtgggcattt tcttgcaacc atttgccttc aggagttgtt ccgaatgctt
    70141 ctgtgagttc atatgattgg ttttctgatg agatatccat cgctaaacca gtttgatgtt
    70201 cgctagtacc tggatacgct actgcttctc tcgctttttg gtcacctttc gcatttactt
    70261 ctgcttggaa gacttcttgc tggcgtttgt acgatcgata accagatacg gcgaatagtt
    70321 tcttaccatc tttgttcgca gctacgaaca tttcttctaa tgcagttgct gcttcttttc
    70381 ttagctgtgc tttttcgact tgttggctgc caaaagagaa tgtaacattt ggacgaacca
    70441 agtcaggggg ggtatatgtt ggttgcaatg aataatcttt gttagctaaa accaacatat
    70501 tttcctcatt ttcaatatac tttataccat ctttttctgt taatttattt tgtttatcaa
    70561 tgtatggata aagtggatct ttttctaatt ccgcaagtgt ttgattgcct gacgattttt
    70621 gctccacttt agcgatggaa tcagcatttg tgccaccaaa atattgatct tccactgtgt
    70681 ggacacaact gatgctaaca gctaaagcaa ttgttaataa agaactcata tctgtttatc
    70741 aaccttcctg tatacattaa gtctaattct aagttagtaa ttaaaattat tttattgctg
    70801 cttcaagtgc tacaacaatc atatcattga aagtagtttg gcgctcttcc gcggatgttt
    70861 cttccccagt gaaaatatgg tcacttacag ttaaaatagc taaagcacga cgaccatatt
    70921 tttgtgctaa cgtataaagt gccgctgctt ccatttcaat tccaagcaca ccatagtctg
    70981 ctaattgttg tttgtctagt tgatcattat aaaaacggtc tgcagaaaaa acattcccaa
    71041 ctttaagcga taatcctttt tcgatacctg catcatacgc tttttttaga agagaaaaat
    71101 cagctactgg tgcaaaatct acgccagcaa aagtattgcg attaatttgc gaatccgttg
    71161 atgccgcttg tgcaatgaca acatcacgta cttttacatc cgcttgaatg ccgcccatag
    71221 taccaacgcg aatcaagttt ttcacatcat agctttgaat taattcattt acataaatcg
    71281 aaatagatgg aattcccata ccagttccca taacagaaac tttttcgcct ttgtatgtac
    71341 cagtaaatcc taacatgcct cgcacttggt tgaataaaac gacatcttcc aaaaatgttt
    71401 ccgcaatata ttttgctctc aatggatctc ctggtaataa aatagtttct gcaatttccc
    71461 cttgttttgc ttcgatatgt acgctcatct tttttcctcc tagtgtttgt ttttctcttc
    71521 atctagcaaa taagcatccc aaagttcatc aaaaatagac attcccggta aatacggcgc
    71581 attaaactcc agataatcac aaagaatatg gtagtttctt gtttgctttg gaaaactatg
    71641 atctcggtat gcattgttgg caaattccgt tttctgatct gttagcttcg ggtcccgata
    71701 tgtcattaaa aaatgataaa atgatcttcc caacgtacaa cacactccgc tctttttatg
    71761 ctttaactat agttgatttc ctgaaaaaaa taaagttaat tttcgatttt acgtagaatt
    71821 tcttctgcaa gtcgatgtgt ttctaaggca tcttctttgg aaattggtgc tttttcccca
    71881 tttcgcacgg ccgttaagaa ggcttggatg atagatacaa aacctctttt gtaaagcgtc
    71941 gtttcccaat ctccaaaacg ctcaaaccgc tctgttgtcc cttcataaat atgcgtttcc
    72001 gtaacatttt ctacttcata tttggcgctc ggggtcatca ctgctaatcg ttcttcgttc
    72061 acgccactat ctcggttcat aatcgccgtt gccactttac ctcccgctgt aatttgtacc
    72121 gttatacttg ctagaaggtt ctcttgccat accggaacga catgtaactg ttctatttgg
    72181 gcatctagta aaaaacgcac ggtatcaatg acatgaataa aatcgtcata aataaatgta
    72241 cgagcctcac ccggttgcgc cgcgcgattt ttttgcataa taatcatgtt ggtatctgtt
    72301 aaggctttta attcttgata ttttggcgcg taacggcgat taaagccagt cataagtaac
    72361 gtattttgtt cttcagctag gcgtgttaat tcttctactt cggataaatt gtcggcaatt
    72421 ggtttatcca cataaactgg aatatgattt gctagaaaag tccggattac ttctgggtgg
    72481 cttgctgtag atgaatgaac aaacgctgca ttcacgccag actcaatcat agaatgaata
    72541 ctttgatgat aatgatcaaa acgatatttc tcacttaaat gctttaattt ctgcgcatcc
    72601 ctcgtgtaaa gatgtacctc gatattttcc atttcagcaa aaactggcaa atatgctttt
    72661 tgtgcaatgc cgccaagccc tactaccgct atttttaaca tgtgtatcgc tccttatcac
    72721 aacaatgcca gagaatgatt tcgcgatatt attctacaca tttcattttc tggcatcatg
    72781 tgtttattca aagattttct tatatgcttg gtagccttct tcttctaact tatccacagg
    72841 tatgaatctg agcgctgcgg agttaatgca gtagcgaagt ccacccttat cttgtggtcc
    72901 atctggaaaa acatgcccta aatgggaatc agcatcagca gatttcactt ccgtccgaat
    72961 cataccatgg gtcaaatctc gatgttcaat aacttctgct tcatcaatag gcttagtaaa
    73021 gctcggccaa ccacagccag catcgtactg gtcattggat gaaaaaagcg gctttcctga
    73081 aacgatatct acataaatgc cttttgcctc attatcataa aattcatttt gaaatgggcg
    73141 ttcggtaccc gctttttggg tcacattata ttgtatatct gttagttgtt gaaggcgctc
    73201 gttcttttta ctttcatcca tttgatttca ccctttccag ttggcatcta tgaatgcagc
    73261 acgacctgaa gcaacttgat atccctcata gtgcgctttt tctttcttgt aaaaatcttg
    73321 atgatattct tcagcaggat aaaatgtttc tgctttggca atttctgtga caatcggctt
    73381 tttaaatcta ccactcgcat caagggctgc ttttgatttt tcagcaattt ctttttgctc
    73441 ttcattgtgg taaaaaataa ctggtcgata cgaatcacca cggtcaagaa attggcctgc
    73501 cgcatcagtc ggatcagttt gttgccaata tacttcgact aatttctcat atggaaaaac
    73561 tgccggatca aatgtgattt ggattgcttc tgtatgtcct gttgtcccgc tgcaaacttc
    73621 tttataggtt ggattaaccg tatgaccacc cgtataacct gaaataactt tttcaattcc
    73681 tggttgcgtg tcaaaaggtt ttaccataca ccaaaagcat cctccagcaa atgttgcttt
    73741 ttcaagtgat tcttttgtca taaaaatgcc ccctaactag gattcagcca gccaaattac
    73801 ttaactggta ctaaaagtgt aaacgaaatg tcatctttct tcaaatttag cgtatcagca
    73861 cgtacttttg tgccgccttg cagttttagt ttatctaggg aaaggtagat tttttccttt
    73921 ttaggcataa ttgtcaccca atcagggaat ttatagtttt tgcttacata gttcattacg
    73981 taagacacgg gcagtggcaa agcgccaacg gacatatctt taagcgtcaa ctcaacattg
    74041 ccattatcga caacttccgg tgagaatttc aagcgtagtt cgactggttc accaaaaatt
    74101 tcagcttcgg cagtaaaatt aacattattt gcgacgaaaa ctttataacc gatatcttga
    74161 tctttgctaa aatcttctat ataagaacta atcaattggt ttaagtcagc ttttgttgta
    74221 ctcgtttgaa attcaaccat tgatttattg ctaatcaggg atggcgtggg ttcatcttgc
    74281 gggctgagtt tgaatactgc tacataaatc cagccagcag aaattagaag tacactaatt
    74341 aatgtgatac atacccattt ccaataatta cgttttggtt tttttggagc cgatcgtgtt
    74401 tctctctgca cgattttaac acctttctat ttgggaatat tgccttcgtt taattgtttt
    74461 acgatggctt tgtctaattc cgatgtcatc ttctcatatc ctctatgatt aggatggaaa
    74521 taatcatctg acagtagcga attaggttta tctttattat ctgcatttcg gtcttctaaa
    74581 acttttgcaa taggtacaaa ataagcattg ctatcttgct ggatagtttt cttggaagct
    74641 ttattccaat cagagataat ctcgtcaaat tgtttgatat cgctgaaata agttgtatat
    74701 ggattgtaaa tacccattaa aaatatcgct gcatctttgt tataggaccg aatgtctttt
    74761 agaagtgtct ctaactcttg ttggaattct ttgtttgctt ttgtaaaatc atctacattt
    74821 acatttaaca gacgagattg caaaatagcc atgacatcat ttccgccaat ggtgattgtt
    74881 attacattcg catttttgac atcttcttgg aagtctttgt ttgtttttaa acgtttttcg
    74941 agttgggtta ttttgtttcc agataccccg taattactcg tttttacgct tggaatgttt
    75001 gattcttctt ctagttcttt agggataatg ccgacatatc cgcccccttt gttttcatca
    75061 ccaacacctt ctgttaatga atcacccatg gcaacgagat taatcggaat ttcttttgat
    75121 tctttataat acttgatacc aaaaactgcg ccaacaagaa gtgcgataac aagcacgctc
    75181 cctgtaagcc acagccattt tttctttgtc atatgcaatc actcacttag tcagtatagt
    75241 acataaatgc aaacgcacca gttccagcat gtgtggagat aactgggtct gcaaaaaata
    75301 gtggaatttc tgttaaaccg gttatttctt ttgattcagc gatgaaatca tccgccagat
    75361 taagcccatc cgcatgaaca acgtctagat gctgaatttt tttcggttca tctttaatta
    75421 ggtttaggca atattgtaat acttttttgt tgctgcggac tttcgtttct tcttccaatt
    75481 gtccgtcagt taatttggca attaatttga tatttaaaag actaccgaag aagccttgca
    75541 tccgtccaac acgtccacct ttaattaaat tatcgagtgt tacgacaacg atataaagtt
    75601 ttgttttgtc acgaatatca ttaatttttg cgtgaatttc ctctacagaa taatcgcccg
    75661 actgagccat ttcagcagct tttagtactt ggaatgcttg cccacgagct gtataatcgc
    75721 agtctacaac cgtaatattt ccttctacca tatcagctgc ttggcgagcc gcattgacag
    75781 taccacttag tttttcagtt aagtggatag aaagaatttc atagccttca gccgtatatt
    75841 tttcgtatgc ttccacaaaa gaaccaatcg caggttgaga agattttggt aattcttttg
    75901 tttctgccat tcgtaccata aattcttctg gtgtaatgtc tgttttaggg ttgtatattt
    75961 gcccatcaat ttctacggtt aaatataaaa catcaatatt ccattttgct gcttcttcta
    76021 atgttagtcc agcagttgaa tctgtgataa tttttatttt tctcatatag ccacatccag
    76081 ttttgcttat tttatcttat tataacatcc ccggcagtat acacaaccta taaactagtt
    76141 ttaagaaaag agaaagaaat ggtatttgtc tttctattct gtatttttta gcgtatgata
    76201 gatatataaa acacacaaaa tttgtagaaa agtatggtga taaaatgaat gtcacttctt
    76261 acaattggaa agaagaagta gccaatgcta taacgcatgg tattgggttt atccttagta
    76321 ttcccgcgct cgtcttactt ataatattcg ccgccggaaa agataatcct ctttatttaa
    76381 caagtttttt aatttatgga atttccctca tgttgcttta tatttgttcc accctgcttc
    76441 atagttttaa accttgcaag gcgcggacgg tttttaacat tatggaccac gcagcgattt
    76501 atgtattaat tgctggcagt tatacgccat ttgttttgat tacgattcaa gggacactcg
    76561 gctggacact atttggtgtc atttggggcc tcgcaattgc tgggattatt tataagatat
    76621 tcatgactgg caaattaaaa cttttgtcga caagtgttta cttacttatg ggttggatgg
    76681 ttatgtttgc cattaaaccg ctttatgccg ggctgactcc aactgggttt tggttacttg
    76741 caactggtgg gattatgttt acagtaggtg ctgtttttta cagtatccct cgtgtcccgt
    76801 atatgcacgc gatttggcat ttatttgtta tcgcgggaac cgcttttatg tatttctgta
    76861 ttttatttta tgtttaaata acgcaatgca aagaccttct ccaatgcgag aaggtctttt
    76921 tatatagtat gtcacaattg agacttgttt ttaattatgt catactatat aatgattagc
    76981 ataacacaat aaaaggatgt gattcccatc gaactttctc ctagacaaca tcaaattgtt
    77041 gcctatgttc gcgcgaatga gcctgctaca ggtgactcta tcgctgcgca tttaaaacta
    77101 acacgagcca ccattcgagc tgacttgtca attttaacca tgactggcat tttagatgct
    77161 cgtccaaaag ttggttactt ttactctggt ttagaaacga atccaattca ctttgatgaa
    77221 attcgtcagt taaaagtagc cgatattatg acacaaccat ttttcgcaaa aaaagaaacg
    77281 agtgtgtatg atgcgattgt tatgctcttt atggaagata ttggtagttt atacgtcgtt
    77341 gatgaggatc ttttggttgg gcttgtctct agaaaagact tgctaaaagg cgcccttgct
    77401 gatgcagata caaaagcgac gccgattgcg acaattatga cgcggatgcc aaacctcgtt
    77461 accgttacga aaaacgacac tgtgttacat gccgcagaac aactcgtatt ccaccaaatc
    77521 gattcgcttc ctgttctaga aaacaccaaa gtcgtcggaa aaatttcaaa aacccgtatt
    77581 actgcgctat ttgtagatac aattaaaaag gtttagtagg aggaaaatat ggaaaatccg
    77641 gttattatat acgttatttc agatgctatc ggagaaactg ctcaacatat tattcgcgcg
    77701 gtaacagctc agttttcgct taataagcct gcggacattc gccgccatgc ttttattcgt
    77761 gatgagagcg ctttacttga aacgttagaa gaagccaaag cggcagatgg tatcgtcgtt
    77821 caaacgctcg tacaagctaa gttagctgag tatgccacta atttttgtgt gcaaaacaat
    77881 attccaaacg tagatttgtt acatacacta accgctgcgg tcgaagcaaa aactggctta
    77941 aaatctaaac aagacccagg aaatatgcgt cgtcttgata gcaattattt tgatcgtatt
    78001 gctgccattg aatttgcagt aaaatatgat gattgcaaag atccacgtgg cctattagat
    78061 gcagatattg ttcttgttgg ggtatcaaga acgagcaaaa cccctctgag tagctttctt
    78121 gccaatcaaa attggaaagt tgctaatgta ccacttgttc ccgaaattcc gattccagcc
    78181 gaacttttcc aaatcccagc ggaacgtatt atcggcctta caaccacccc agaaaaacta
    78241 gcgcaaattc gcaaagtccg tttaaaatcc attggtttag acgaagcaag cagttattcc
    78301 agtgaaaaac gcattttaga ggaactagaa tatggttatg acacattcaa aaagcttggc
    78361 tgccaagtca ttcatgtaga agataaagcc attgaggaaa ccgctgccct aatcacggaa
    78421 attatcacga gttaccacta atttgaagag gtgaataatg tgagaaaatt tgtctatcag
    78481 ttcagtgaag gttctaaaga aatgaaaaat attttaggag gaaaaggtgc taatttggcc
    78541 gaaatgacga atatcggttt gcctgtgcct cctggtttta ttatctcgac cgatgcctgt
    78601 aacgattaca cggcaaacaa taaacacctt tccgaagcta tatttgaaga agtaaaaatt
    78661 catttagcag aactggaaaa acaaaccggg aaaattttcg gatttgcaga aaaccctcta
    78721 ctcgtttccg ttcgttcggg tgcccctttt tcgatgcccg gtatgatgga taccgtgctc
    78781 aatctcggtt taaatgacca agccgcagaa gggctcgcca acttaactgg tgatgctcgt
    78841 tcggcttatg attcataccg ccgttttatt caaatgttcg gtgacgttgt ttttgaaatt
    78901 ccaagctacc aatttgaaca ggctcttagt cgcatcaaaa aagcaaacaa ctaccgctta
    78961 gatacagaat taactgcgac tgatttaagc aatctcatcg atgcttacaa actaattttt
    79021 agccaagcaa ctggtataga ctttccacaa gatccactgg aacaactgcg gcttgcgata
    79081 atcgctgttt ttgattcctg gatgaatcct cgcgctgtta tttaccgcag attacatgat
    79141 attgatgcaa gttttggtac agccgttaat attcaagcga tggtttttgg aaacactgga
    79201 gaaacgagtg gaactggcat tacctttacc cgcaatcctt ccaccggtga aaagaaggtg
    79261 ttcggggaat ttttactgaa tgcgcaaggt gaagatgtgg ttgcaggaat tcgcacccct
    79321 gagccgataa gtgcgctgga agaaagaatg cccactgttt acaaggaact cctccagact
    79381 tgtgaacttc tcgaaaatca ttatttagac atgcaagata ttgaatttac catcgaaaaa
    79441 ggcaaactct atgtcttaca aactagaagt ggcaagcgaa cagccaaagc agctattcaa
    79501 gcggccattg attttgtcca tgaaggaaaa atcactcgtc aagaagccat tatgcgtgtg
    79561 gaaacaaaac aactaaacca attacttcat ccaacttttc ttgaaagcgc tcttaaaaat
    79621 ggtcaagtca tcgcaactgg tttacctgca agccctggtg ctgcaacggg gcaaattttc
    79681 tttgaagcaa aagaagctgt ccaagcagcc gaacgtggca ttcctgtcat tttagttcgt
    79741 aatgagactt ctcctgagga tatcgaaggt atggcacgga gtaacgctat tttaaccgct
    79801 catggtggta tgacttctca cgctgccgtc gttgcccgcg gaatgggaaa atgctgtatc
    79861 gctggatgtg ccgaacttac tattaatgaa aaagataaaa cgatcattct tcctactggc
    79921 gacacactgc atgaaggtga tgcgctctcc cttgatggta gttccggcaa agtttacctt
    79981 ggagaaattg ccctcagaga agcgaaaatt ggtggctatt ttgacgagct gatggcctgg
    80041 gctgatgcgg agaaaagatt aatgattcga gtaaatgcag ataccccagc agactttaaa
    80101 aaagcgcttt tatttggtgc ggaaggtatt ggtctttgcc gtaccgagca tatgtttttt
    80161 gatgaaaaac gaattcctta tgtacgccaa atgattttag cagaatcatt aaacgagcgc
    80221 gaatctgttt tagcaatttt aaaagaaatg caaaaagccg atttcaatga attattccgt
    80281 attgcagacg gtcgttcggt aaacattcgc ttgcttgatc cacctttaca tgaattttta
    80341 ccaacaatga agcaagaaat agaacaattg gctggcgcga tgaatcgaac cgttcctcaa
    80401 attacaaacc gaatcaacgg actaagagaa gccaatccca tgctcggaca tcgtggttgc
    80461 cggcttgcta ttacgttccc agaaatttac cggatgcagg cggaagcaat tatcgaaagt
    80521 gcaattatcg ttcataatga aggaatagat gttcacccgg aaatcatgat tccactcatc
    80581 gctacgaaaa acgaacttag ctatataaaa aaagaactgc aacaagcagt ccaagctatt
    80641 tttgatagag aacaagtgtt gattccctat gatatcggaa caatgattga aattccgcga
    80701 gcgtgtgtaa ctgcagccga aatcgccgag gaagcagcgt tctttagctt tggaaccaat
    80761 gatttaacac agctcactta tggtttttca cgtgatgatg cgaccaagtt cctagccgat
    80821 tattatgaaa aagatatttt acctaaagat ccatttgttt cgattgataa aaatggtgtc
    80881 ggcgcactag ttgaaatggc agttacacgt ggacgaatga cttcggaaca tttaaaaatg
    80941 ggggtttgcg gcgaacatgg tggcgatccg gaatctatcc agttcttcca tcaattagga
    81001 cttagctatg tttcttgttc cccgtaccgc gttcccattg cccgccttgc agcagctcaa
    81061 gcagcattag ctgagaaaca attagttcca actatctaaa aaaagccaga tgacaatcaa
    81121 atagactgtc atctggcttt ttctcctatt atttttcaca aatcgcaaag taatttcctt
    81181 cgttatccga aaaattgaac acccggccca ttggtaaatc gaccaaatca ccaaccgtaa
    81241 tgcctttatc tttatattct tcataaagtt ctgcgacatt atttccaaat agtaaaatag
    81301 atggtgtccc aagattcatt tctgggttca tttccgccac tttctttttg ttttgaagaa
    81361 caaaagtagt ttctacacct tttgttggcg ctatctcaat ccactgaatt tcgccattta
    81421 ccacttcttc tgaaactacg acaaaatcta atttttctac ccaaaaatct ctcactgcag
    81481 cttgattttc tacatataac atcacttgac caattttttc aaccatcgtt catcgtcccc
    81541 tcgtcatttc tttttctttt agtccaaact ccgcataaaa gtcacgcttc atttctaata
    81601 aatagcgcaa atcattcata aattggaata aaatcgctct attttcaaat tctgctcgtg
    81661 tctctgggag cttactactt cgaaactcat gcaccatctt agtaatttcc gccactaaat
    81721 cctctgctgt attatgctca tctaacgtct gtgctgtttt ttctgtaatt tctgccagcg
    81781 ccatactttg ctcagaagaa tgatcaaacg cgactaaatg ccgtttcatc tgtgttaaaa
    81841 ttcgatattg cacaagccgc atatcgacgt actgcgaata atagtgggaa gaagcaaaaa
    81901 actgattgtc taaatttctt gctgcttttt cctgtgcata gtctaatgta ccctttaatt
    81961 gatttaataa gccaaactca tcatgatact ccgactgatt ccgaagccct tgcgtcattt
    82021 ccgtcaaaat ttgccgcata attgcttcta ttttttgttg gctgcgtttt aattcgtctt
    82081 ccatttttgg catatataaa tttaaaataa tcgcaatacc tgcgccaact gccataagta
    82141 acagttcatt tttaaaccag aaaaaggata atgattgttc gagtaaaata tgcgatacga
    82201 gtaccgagct caccacaatt ccatcagcaa catgcagtct tacagcaagc ggaataaaaa
    82261 tcagtaaata aagtccaaaa ctcaccgcgt tataaccaat gagcatgaaa aatacggcag
    82321 caatagatag tgccaaaacg gtcgaataaa cccgctgaat cgctagttgt aaagaccctt
    82381 ttttcgtatt ttgtacactt aaaattgcga taatccctgc cgaaactgca tattccaagt
    82441 gtagccattc cgccaaaatt atcgccagtg tcgctgcaat cgcggttttc accgttcgca
    82501 ttccaatccg catatgtcca ctcccctttc tatgtccaac ctatcatagc acgaaagcga
    82561 aaatcacaaa agaaaaacct tgaagatcat tcctcaaggt cctacattat tcttcatcta
    82621 gtgttttttt gaaacgtgct cggaaaaaga atcctaaacc gaccacaaca agtatcgcaa
    82681 tgacgctata aattattgtt gaaaagctat ccataaaaac aacaatttca ttccatgact
    82741 ccccaagcac agctccaagt ccaattaaaa ctgtattcca aagtaagctt cccgcggtcg
    82801 tcaaaattag aaacctcgac attttcatct tggtcatccc agctggaatc gaaatcaggc
    82861 ttcgtattag cggaatcatc cgacataaaa atacagccca acttccatat ttcaaaaaga
    82921 aactttctgc gcgttcaata tcagattcct tcagccgcaa aatccggccg tattttaata
    82981 caattttcgt gagtcgttct ttaccaaaat aagaagcgac tttatacagt aaaattgcgc
    83041 ccacaacaga acctagtgtt gctacaataa tcaccatcac gacattcaat gatgtaactg
    83101 tcgtcataaa tccaccaaaa gttaagataa tctcagaggg aataggtgga aacaagtttt
    83161 caaccataat caaaacaaaa atacctatat agccaaaatc agccataata cttgtaatcc
    83221 aagtttccaa aaaacacact cctgtacttt atttcccttt taaagtaagt gcttgctttt
    83281 caattctact atactagctc tactttttca atcaatttgg taaaagaaaa agaatttggc
    83341 attttacaca ccaaattctt ttaaatttat tttgcaacta gtcgcatttg tacagcttct
    83401 attcttaaac tttctcctgt tgttcctgct gttgctccat ctttaaccca actttgccaa
    83461 cctttatttt ggacatgcgc tctatactgc acactataat ttttagcaat atttccagtt
    83521 aatttcactt ggaaagcttc cagacgtttt gactgtccac gagttccaga aatttcccca
    83581 tttttcaacc aaccttgcca tccactacct tgtacatgtg agcgatattg aatatctcca
    83641 gaatacggca tccctgataa actaattttc attgcttctg ctcgtaagcc aaggccaact
    83701 gtgcccgaag tcatactatt agcaacgttt cccatccatc ccttactttg gacgtggagc
    83761 tcgtaattta tccctttttg tttgcttaca gaaagattat tgtcaaacgc ccaagtataa
    83821 atattattta gtttttcttt tgttattctt gtaccaaagt tgtccccggt accatttaaa
    83881 tattcatatg cgtttactgc taaaatctgt tttttagaat tataaacacc actaccacta
    83941 ctaccacctg ttgtatctaa tctataaaaa acattatttg cagtgacttg agagatattt
    84001 ccagtttgag tgtacaattt cccttttttg tcaccatgat aaccactaat agtaattgca
    84061 ccagatgtat tagttgttaa ccccattgtt ccagtttttg tcccaatatt tttatctaat
    84121 ttaataactc cataatcttc tgtagaaggt tctttttttg tccattcttt tggaacatac
    84181 atttttcttg cttttgctgt tccaaaagga gctttcgtgc cattatatcc aggatataca
    84241 gtcacttttt ttgcccatcc accatctttt ttaccatata aacaatgagc ggctgtaagt
    84301 acagaatctt caccaatcaa ttgtccacta cctatataag tttttccatt tggaaattcc
    84361 attacaaggt aagcgctcgt tgaatatgga tattgagttg tatttgttac aagttttcta
    84421 ccatctccgc caaaaatcgt ttttaaacct ggggttagaa cggcttcctc attttcaata
    84481 gttaatcctg ataaatcaac ctcaacttca tcagatgtat ctaacgtccc cgttgttgaa
    84541 ttaacatctt ctaaatcact aatctcatcg actataaact cttctccgtc atttgttacc
    84601 gtttccccaa ctatcttttc atcgattggg gcttcctctg ctgcttgtgc aacaattcct
    84661 ccacctaata aaaatagagc aaaagcaagc atcaaagtaa atattctaag ctttttcata
    84721 gttgcatctc ctttttttgt ctattagcaa ataaatatat caaaaaatca cttgattgta
    84781 tcgcattgtt gaaacttaaa ttagtttaaa acttcccaat
//
LOCUS       DASDYK010000003        71945 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.003, whole genome shotgun sequence.
ACCESSION   DASDYK010000003 DASDYK010000000
VERSION     DASDYK010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 71945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 71945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..71945
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.003"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(167..1267)
                     /gene="ychF"
                     /locus_tag="U0308_000211"
     CDS             complement(167..1267)
                     /gene="ychF"
                     /locus_tag="U0308_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEM2315228.1"
                     /translation="MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGIV
                     EVPDHRLNKLTELVKPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICH
                     VTRCFDDENITHVEGRVDPLDDISTINLELILADLETVEKRIGRVEKLSKQKDKDAVA
                     EYNVLVKLREAFENDKPARAIEFNEEEEKIVRNLFLLTRKPVLYVANVSEEDVSSPDD
                     NKYVQQVREFAASENSEVIVVCARAEEEIAELEDEDKLEFLEALGIEESGLDQLIRSA
                     YTLLGLATYFTAGVQEVRAWTFIKGMKAPQCAGIIHTDFERGFIRAEVVAYDALLEYG
                     SEQAAKEAGKVRLEGKEYEMKDGDVVHFRFNV"
     gene            complement(1418..1726)
                     /locus_tag="U0308_000212"
     CDS             complement(1418..1726)
                     /locus_tag="U0308_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2315229.1"
                     /translation="MEGMELASFQIISSVGAARSCIIEAMKFGRQRKFTEAYKKIDEA
                     NEFLSEGHKNHVQLIQKEADGGDVQISILFMHAEDQFMTTYTLRDVAYEMIAIWKEMK
                     "
     gene            complement(1732..4002)
                     /locus_tag="U0308_000213"
     CDS             complement(1732..4002)
                     /locus_tag="U0308_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HEM2315230.1"
                     /translation="MAVYLDKEKPVSERVEDLLSKMTLAEKCGQLNQRMYGWEAFSRD
                     GETFHITEKFKEEVTRFEGIGALYGLFRADPWSKMNKDTGVSRKNAGKVANKIQRYVI
                     ENTRLGIPVLLAEEVPHGHQALDSESYPVNLARAASFNPELQKQVASAITEEISEKGV
                     HLALASALDILRDPRWGRAEECYGEDPYLAAELTAAITEGFQASGKIAVILKHFAAQG
                     EPIGGHNSGPVSIGVRELREIFLEPMRAGIRSGALGVMAAYNEIDGVPCHANKELLTT
                     ILREEMGFSGIVMADGCALDRLLKLNPDPKKAAKMALEAGVDLSLWDEVFPFLEESVE
                     KGILDEKVVDDAVRRVLQVKFQLGLFEQPFVEEEIQAPKSDWKQLNLQAAREGICLLK
                     NDFETLPLVGERKKIAVVGPSIDALYNQLGDYTAPQNESECVTVLEGIKKLLPKNWEV
                     VSEKGTEIREELPDGIQRAEVVAKEADAIVMVLGGSSARNFDMEFLNNGAVSSKGPNM
                     DAGENVDVADITLPQPQLDLFYAMKRTGKPVIVVMIQGRPIAIPEISSTADAILTAWY
                     PGSVGGTAIAEVLFGHYNPSGKLPVSIPRSSGQIPIYYNQKAVEYKEDYFDLTGKPLY
                     PFGYGLSYSAFEYQDLQIKQESIKIAELLGGQSVEVKVTLKNTSNVAGEEVVQLYLHD
                     MEASITRRKKELKAFKKVRIAAKQTATVTFKLDKSSFEIWSINNKYEVEPGGIEIFVG
                     GSSDTKLTGRVSIIGG"
     gene            complement(4037..4336)
                     /locus_tag="U0308_000214"
     CDS             complement(4037..4336)
                     /locus_tag="U0308_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2315231.1"
                     /translation="MKNIMLMCNAGMSTSVLVRKMERVVEERNLELTIWAISETDFEK
                     NWRKADAILLGPQVNYMKDKVIDTVGDNVSVAVIDIVDYGRMNGEKVLDLAISLL"
     gene            complement(4351..5646)
                     /locus_tag="U0308_000215"
     CDS             complement(4351..5646)
                     /locus_tag="U0308_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2315232.1"
                     /translation="MKKFIEKLSWLSQKLGNQIHLKSMRDAFATILPFIMLAGFMVLI
                     NNVIIKPDGFMSAIISSETLTTWQGLGNSIVNGTLGIITILIGASVAYFLAQNRKFEN
                     PFAPALMTIALIVIFIPAVTEIVPIGAEKSVEVAGVLPIALMGSAGMFVGIVTALLAT
                     EVFIRLSKSEKMKIHISGDSVPPAVIKSFNVLIPTMLTILIFAFISFLVVTLFSLNLY
                     SLISAIIQEPLTFLVTSVPGFLTLMTISQMLYSIGIAGSGILGPIMDPVLLANMQENM
                     TAFANHTEIPHIINTTFRDVFGVMGGGGNTIALLIAIFIWSKRKDYREIATLSAAPGL
                     FNINEPVVFGLPIVYNLSLMIPFIISTPLCLCLAYFATKLHMISEVVVMVPWTTPVVA
                     SGFLATGGDWRAAVFQIFLIGVCVLLYLPFLKANDRIKA"
     gene            complement(5796..7712)
                     /locus_tag="U0308_000216"
     CDS             complement(5796..7712)
                     /locus_tag="U0308_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2315233.1"
                     /translation="MSASKLSLPRWKQIVHMLYLKMEFISGGELGEALAVNPRTIRND
                     IKVINQILMIGGNRIESLPGVGYRLVIGDEKALREALLDDSIGRANMNIVPMFAEDRA
                     DYIIRYLLLKNDYVKLETLSEELFVSKSTINLDILEVKRKLKENELKVEKRAGYGIRI
                     TGAELAIRFCFSRYLLVESTSPLITETEINFFGEVNLEMMEQIVVSNIAKYNIHMTDI
                     SVKNLIIHIAIAVCRVKDNCYVPATDLEDIEFSMPELRAAQGIIKEIDLSEGIRFPES
                     ETAYLLLHLSSKNRKSDFNNYREYIIVDKMLEKIKELYGYDFKQDQKMISNIALHLKP
                     AINRIKFNMNIQNPYLKNLKANYPLAFELGLVAKEVLEQELKTNVDEAEVGYLAIHFL
                     YGLDKEIGSEKQKVLIVCASGLGTSQLLESKVRKEFENTLEIVGVYSFKEYEQSGTAC
                     DFVISTVPLRMKLHPFIQVSPFLTKADIRNITALMKQDETKNQFEVDKVFKESLFLIS
                     DKKDKEQVLVDLASLLLENNIVGEDYLPSLFEREEIVPTYLGNGLAAPHPIEANVQET
                     AIGVCIFTGGGVKWNEEDQAQVIFMLAVKNKQQQQLATVYELISNLVESPKAMGELKR
                     VTSFEEFMRVLQTI"
     gene            complement(7923..9389)
                     /locus_tag="U0308_000217"
     CDS             complement(7923..9389)
                     /locus_tag="U0308_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HEM2315234.1"
                     /translation="MTDRKNLTTNQGVPVGDNQNSMTAGRKGPTLIEDYVLIEKLAHF
                     DRERVPERVVHARGAGAHGKFVTKKSMKKYTMAKFLQEEGTETEVFARFSTVIHGQHS
                     PETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGN
                     RYWDFFSLTPEATTMIMYLFSDEGTPASYREIRGSSVHAFKWINEEGKTVYVKLRWIP
                     KAGIVNLSTEQASQIQAKEFNHASRDLYEAIENGDYPEWDLYVQVLDPKDLDNFDFNP
                     LDATKDWFEDVFPYEHVGTMTLDRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGR
                     LFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGHMPFKQQTSSINYEPNSYDTEPK
                     ENPAFIEPEQEIRGDISGRLIAEKPNNFGHAKEVWDRYSDAERAALVKNIVDDWSQVR
                     DDIKIRNLRNFYQVDPEFASRVAAGTGVNLEAHVADLK"
     gene            complement(9538..9741)
                     /locus_tag="U0308_000218"
     CDS             complement(9538..9741)
                     /locus_tag="U0308_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF951 domain-containing protein"
                     /protein_id="HEM2315235.1"
                     /translation="MFMEKKHFDLNDIVEMKKPHPCGTNRFKIIRMGMDIRIKCEGCG
                     HSVMIPRREFERKVKKILVKAEQ"
     gene            complement(9748..10599)
                     /locus_tag="U0308_000219"
     CDS             complement(9748..10599)
                     /locus_tag="U0308_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEM2315236.1"
                     /translation="MAKGLGKGINALFNNVDTNEETVQNIAIKDIKPNPYQPRKIFDT
                     KAINELRDSIKIHGVLQPIILRNTDKGYEIVVGERRFRAAKEAKLKEIPAVVRDLTEE
                     EMMELSVIENLQREDLSPLEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLT
                     LPEEVQVMLRDGSLSAGHGRVLLGLKLKKNIIPTAKKAVAQGLTVRQLEDVVNNLNEN
                     VSRETIKPARVPIFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL
                     DIQFDDE"
     gene            complement(10592..11353)
                     /locus_tag="U0308_000220"
     CDS             complement(10592..11353)
                     /locus_tag="U0308_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEM2315237.1"
                     /translation="MSKVIALANQKGGVGKTTSSVNLSSSLAFLGKKVLLVDIDPQGN
                     ASSGVGVNKGEIEHCIYDVLVDDVAIQDVLQKTDLDNLNVIPATIQLAGAEVELVPAI
                     SREIRLKKAIDSIRDDYDYVIIDCPPSLGLLTLNALTAADSVLIPVQCEYYALEGLSQ
                     LLNTIRIVQKHLNEDLQIEGVLLTMLDARTNLGIQVIEEVKKYFQNKVFNTIIPRNVR
                     LSEAPSHGKPILLYDAKSKGAEVYLELAKEVVAHG"
     gene            complement(11578..12336)
                     /locus_tag="U0308_000221"
     CDS             complement(11578..12336)
                     /locus_tag="U0308_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2315238.1"
                     /translation="MIHSTLSGITKRMAKIIFVKDEQNEFQAYDFLQNLIVEEPLMAT
                     LVFQGLLQLETAETRKLSTGKQILPDVHLIIGKSQAYSLQTTRVETTVDQPIQEMKAH
                     FKDKNCRLIYFTAFSGDETYYCFVKGYFKDKNPFTDQMSAYREEVKRVFLRRIEAETS
                     IGHADYQFETLKNKALANEGIAHYLDSFSASLGKYIFSKRMEKKWSQLDLALKSDLSP
                     VIIGRLEAGDPDLTLRMYQKVCTVLGVKTTFSVD"
     gene            complement(12495..12794)
                     /locus_tag="U0308_000222"
     CDS             complement(12495..12794)
                     /locus_tag="U0308_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315239.1"
                     /translation="MRFLKIIGHAVGVISCLMVLPSFVIAITSAILSFNPLYITYFFT
                     SPYARAVAVAEESGWGSGFNILLINYGAYLIAFGYTFFAIVKIYSWYQIAKEAKK"
     gene            complement(12806..13660)
                     /gene="noc"
                     /locus_tag="U0308_000223"
     CDS             complement(12806..13660)
                     /gene="noc"
                     /locus_tag="U0308_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion protein"
                     /protein_id="HEM2315240.1"
                     /translation="MPFSRLFGKKEKNQMDDIVEEGVQRVQELPMDKIFPNQFQPRTV
                     FDQDKIDELARTIRIHGVIQPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQN
                     LDDEEVAAIALIENLQREELTPIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKM
                     RLLKLPETVQEAVLNKQISERHARSLLALETEEQQVAILAEIAENHWNVKQTEARIQE
                     ILGVKKPVATKKTKPKRQAISRDVRIAMNTIKQSVTMVKDNGMDLDFTEEETDDFYQI
                     TIQIPKKK"
     gene            complement(13832..14638)
                     /locus_tag="U0308_000224"
     CDS             complement(13832..14638)
                     /locus_tag="U0308_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2315241.1"
                     /translation="MTILNEIQQNYNRLPNKEKQIAKYILEKSDELKNINIKELAEET
                     GTSISTITRFCRHVRCDSFVDLKMRVNTAATMVPSLGYDDLFEEVYSFYHKVIDNTVK
                     LIEPAKIREVVQYIQEAKRVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIIT
                     SSITTKEDFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVTIPVY
                     NTLFVSKRYFANSQFSIMYVMDIISMMLLQNESYRDNMEKTINTVTDEFH"
     gene            complement(14622..15527)
                     /locus_tag="U0308_000225"
     CDS             complement(14622..15527)
                     /locus_tag="U0308_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM2315242.1"
                     /translation="MENYLCVDIGGTSIKYAKFNQEGKRVGDLKSCVTPITGGANQIM
                     PALIRIVEQEKTNVAGVCVASAGVVDSVKGKIIYAGYTIPKYTGTEIKAELEHRFHIP
                     CVVENDVNAACLGEFWLGGARGRGSVLCLTIGTGIGGAMLLNDKLINGSSFTACEVGY
                     MHLSQGRFQDVASTKALIKQVASRKNIEENALNGRQVMEWAYSGDADVLAEIEQWIEN
                     LVEGVVNLIYIFNPEVIVLGGGLMEEESFFKPRLKAAISTKLISPMFDTADITFAKLG
                     NEAGMIGALYHFLNQKEAEKDDDFK"
     gene            complement(15552..15998)
                     /locus_tag="U0308_000226"
     CDS             complement(15552..15998)
                     /locus_tag="U0308_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2315243.1"
                     /translation="MLLDRVTLEDIEVNLKAKDWREAIQTSARLLLERGAIKESYIDG
                     MIQSVENNGPYIVIAKHIALAHTRPEFGVIRGGLTFATLADGVAFGSDMFDPVKLVIT
                     LAATDSESHLEVLSELAEVLMDEEKVTRLIEANSSQAFYDELTKEG"
     gene            complement(16011..16667)
                     /locus_tag="U0308_000227"
     CDS             complement(16011..16667)
                     /locus_tag="U0308_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM2315244.1"
                     /translation="MLKAIVMDFDGIVIDTEVVWYEIFKEWFKTKQNYDLSIEEFLQC
                     VGSNVDDLFRELNRTEQMDINRQDFEAETQATFIENSKSLPAKEGVESFIRELKERGL
                     KLALATSSQRPKPLYHLERLGLLGYFDAIITAEDVTRIKPEPDLFLEALRALDVKPSE
                     ALIVEDSRNGLLAGNSAGVNVLVIPNEVTKHSDLTPNYLERESLAEVDLTEIMAEYNK
                     "
     gene            complement(16730..18136)
                     /locus_tag="U0308_000228"
     CDS             complement(16730..18136)
                     /locus_tag="U0308_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
                     /protein_id="HEM2315245.1"
                     /translation="MSIRVHVQKFGSKLSGMVIPNLGAFMAWGILTAIGVATGSEMLK
                     GFIAPMLNYLLPLLIAFAGGRAVHGYRGGVIGTVATMGAIISSDITMFIGAMIMGPLA
                     AWILKKFDERIDGKIPAGFELLVNNFSIGIIGAGLALFSYVAIAPMVEAVTKVLASGV
                     DVLINNHLLPLTALIIEPAKVLFLNNAIGQGILSPLATLQLAETGKSVLYLLESNPGP
                     GLGILLGYMFFGKGNSKASSYGASVIHLFGGIHEIYFPFVLMNPILILPLILGGMTGT
                     FILTMTNAGLVGVASPGSIITIMMMAAPGDHIKILIAVLCAALVTFITAIPFIKRMGN
                     KDSELQDAAKKMESLKGKKSSISSVFEATVDDFNFKNVKRIAYACDAGLGSSAMGATV
                     LQKKIKNAGLEDIKVFHIAIHELPTECDVVVTHKSLIDRAKEKQPDAYYVEITDYLGA
                     PEYQELIDKIVADREQKN"
     gene            complement(18170..19171)
                     /locus_tag="U0308_000229"
     CDS             complement(18170..19171)
                     /locus_tag="U0308_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2315246.1"
                     /translation="MTKQIKVGVIGVGQMGQYHAEIYQKLPQVELVAICEYNDERRAE
                     MAEKFQCKAYKDYHELLANTEIEAVSIVLPDNMHRDCVEEAVKYKKHILLEKPLAKEL
                     EDGKAMYELTKDYDKVFTVGFLLRFDPRFNMIKQRLDNGELGDIIHLYCRRNSPITGP
                     KRYIGASDLSMHVMIHDIDYINWYMDSEPVKVIAKSRSVLLKEYGMNDVIYAIVTYEN
                     GAIACLEACWVLPENSPTIIDDKLELVGTKGVAYVDSCDHGVRFVSEKGVSYPDSRHW
                     YYTNGEVSGDLAEEVMAFINNVANNTKSIITPKEAYDSLRVVDAIERSIAEGKEVSL"
     gene            complement(19191..19886)
                     /locus_tag="U0308_000230"
     CDS             complement(19191..19886)
                     /locus_tag="U0308_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HEM2315247.1"
                     /translation="MGNSVMEKIKGGLVVSCQALEDEPLHSAFIMSKMALAAVQGGAV
                     GIRANTAKDIRAIQSEIDVPIIGIYKKDYDDSDVFITPTLEEVREICETGVEIVAMDA
                     TTRKRPHNEDLKDILSAIRKEFPNTLFMADTGSIEDVYYADSLGFDLIGTTLYGYTEE
                     TANKNISDDDFSHLKEVLKSTKRPVIAEGKIDSPSKARQVLTLGCYAVVVGGAVTRPQ
                     EITTRFTNEIKKI"
     gene            complement(20088..20804)
                     /gene="rsmG"
                     /locus_tag="U0308_000231"
     CDS             complement(20088..20804)
                     /gene="rsmG"
                     /locus_tag="U0308_000231"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEM2315248.1"
                     /translation="MNPEQFQTALAEKGIELSDTQLKQFHDYFEMLVEWNEKMNLTAI
                     TDEKEVYLKHFYDSISAAVYVDFTKFDTICDVGAGAGFPSLPIKICFPHLKVSIVDSL
                     KKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCM
                     PLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFSFFLPVEESERNIYVITKT
                     KETPNKYPRKPGTPNKLPIE"
     gene            complement(20957..21223)
                     /locus_tag="U0308_000232"
     CDS             complement(20957..21223)
                     /locus_tag="U0308_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008475647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315249.1"
                     /translation="MIDKLKAELLESRRNLEKNLIGMFVASQTHATSENRKRMFKMIK
                     RDKIADIKSNCQGYIDGLSTTAEGKWVNQAKKSFKENANKFDNC"
     gene            complement(21225..21590)
                     /locus_tag="U0308_000233"
     CDS             complement(21225..21590)
                     /locus_tag="U0308_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315250.1"
                     /translation="MDKQRQLLLKLENLDNDFNRKRRQLDEAMDDASQEKWRFHQELE
                     NLSEQIRYIHQKRDYEASEDLQKAYHLISSIQEEGDWKVKNTLTKLENEHEEHQALYK
                     KQVNSYEEELHQLKKDRDL"
     gene            complement(21583..22866)
                     /locus_tag="U0308_000234"
     CDS             complement(21583..22866)
                     /locus_tag="U0308_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2974 domain-containing protein"
                     /protein_id="HEM2315251.1"
                     /translation="MSLPNNDYERMRLARKEYDNLYLTEDVTISKVNGGTNTIGIVSQ
                     KINNKSTGEQSYIITDKYTPPIASISERNKVKELTILYKGSTAPANGNFNVPKHPDYK
                     DVRKDWLSNDIPTAIQITNGGGSTVTPQLKTSAETLKQTMKLYPNAQIYVYGHSLGSM
                     NAQYAIADLDKKDIKRISGGFFYQGPNIYSNLTPKQQDTVKAINALDRLFNFIDRKDY
                     VPIGYGIGDPTIGHLIEVESKKAGMVEQHMWGGYQFDKEGNILTNKEGSLQLAKYVTA
                     QQLAAINIMRTSFTKSGGGLSSSEEIFLDAAEALAITQGMKQTIQGEIRALKDVFDKE
                     IENAEELWRDTLSDARDIGSNLYESEILAALAWGGATEPEIVIDTVQDCEKSLVEATK
                     IEQEYDKLLERINEAIKSQLKTDQELAKQIGSMYG"
     gene            complement(22863..23255)
                     /locus_tag="U0308_000235"
     CDS             complement(22863..23255)
                     /locus_tag="U0308_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1310 domain-containing protein"
                     /protein_id="HEM2315252.1"
                     /translation="MKKRWIIILAITVITIFGLGVKFYMDEEKLNKEMIKVVYSDEAK
                     NAFYKGLKDLDTKALTKEGVIQSYEIDEKSINHNPMGGINVTVIINENPELYIKYTLD
                     KFNGKLECGSASIAGKLSKLLGRWKENS"
     gene            complement(23368..23759)
                     /locus_tag="U0308_000236"
                     /pseudo
     CDS             complement(23368..23759)
                     /locus_tag="U0308_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466328.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1310 domain-containing protein"
     gene            complement(23784..24164)
                     /locus_tag="U0308_000237"
     CDS             complement(23784..24164)
                     /locus_tag="U0308_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1310 domain-containing protein"
                     /protein_id="HEM2315253.1"
                     /translation="MKKRWFIAMVVVVMIVAGLGVKFYMDEEKLNKEMINVVYSDEAK
                     RVFENGLKNLDAKALTGKGVINTYEIDKKSIKQNPMGGINVTLHVNGDSELYVFFTLN
                     KADDKKLIDDGGGNSAKLGKLLDN"
     gene            complement(24323..26212)
                     /gene="mnmG"
                     /locus_tag="U0308_000238"
     CDS             complement(24323..26212)
                     /gene="mnmG"
                     /locus_tag="U0308_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEM2315254.1"
                     /translation="MQTYDAGTFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMV
                     AFMPCNPSVGGPAKGVVVREIDALGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQAD
                     KWDYQHEMKHTIEKEENITLRQGLVDRLVIEDGVCKGVITNSGAIYYAKTVVITTGTF
                     SRGEIIVGELRYSSGPNNQQPSVKLSEHLEELGFELRRFKTGTPPRVKSSTIDYSKTE
                     EQPGDDHPRAFSFDTVEMLLDQLPCWLTYTNETTHEIIQANLHRSPMFTATKKGTGAR
                     YCPSIEDKIVRFSDKPRHQIFLEPEGKNTEEVYVQGLSTSLPEEVQREMLRTIPGLEN
                     VEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLFTAGQINGTSGYEEAAGQGLMAGINA
                     ARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPYRLLTSRAEYRLLLRHDNADLRLT
                     EIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIKPTAEVQAMLKEIGSGELKDGI
                     LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQIKYEGYIQKSNLQVEKMKRME
                     DKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRISGVNPADISILLVYIEQGKI
                     AKISK"
     gene            complement(26237..27610)
                     /gene="mnmE"
                     /locus_tag="U0308_000239"
     CDS             complement(26237..27610)
                     /gene="mnmE"
                     /locus_tag="U0308_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEM2315255.1"
                     /translation="MEFDTIAAISTPPGEGAIAIIRLSGPEAIQIADRIFYAKNSLSE
                     AESHTIHYGHIKEDGEVIEEVMVTVMRAPRTFTREDVVEINAHGGIVSVNRVLQLLLR
                     NGANLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRN
                     LRQEILDALAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLQTASQGKILRE
                     GLATAIIGRPNVGKSSLLNQLIQEEKAIVTDIAGTTRDIIEEYVNVRGVPLRLIDTAG
                     IRETEDIVEKIGVERSRKALADADFILLVLNQNEELTVEDEALFEAAAGHNYVVVLNK
                     TDLETKLDIDRVRELAGENPIVSTSLVNDEGLEALEEAIKTLFFAGDIDAGDATYVSN
                     VRHIALLHQALEALNGVTTGIQLGMPVDIVQIDMTRAWDLLGEITGDSVQDELLDQLF
                     NQFCLGK"
     gene            27968..28786
                     /locus_tag="U0308_000240"
     CDS             27968..28786
                     /locus_tag="U0308_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEM2315256.1"
                     /translation="MKIHKLTWVLLMGLLLLSSCSTKQPNLYLSANAAAVYSVENGEP
                     LYEENADKVMPIASLTKLMTAFLVLEAVDNNELSWDEKLDLVRLDDPSAVSLYAITQK
                     RTWSVRDLYSAMLTMSANDAAETLGDRLDGANFPKEMNNQAKKLGMSSKTTFVSASGL
                     DVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKSSVTTDKGAKLESTNDSLGSIQGL
                     DGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLMEVGFKEN"
     gene            complement(28841..29548)
                     /locus_tag="U0308_000241"
     CDS             complement(28841..29548)
                     /locus_tag="U0308_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMUG2 DNA glycosylase family protein"
                     /protein_id="HEM2315257.1"
                     /translation="MTENTTIAKRILQFNEALANSSFDLPEGYRTVNPYSGDQSELVQ
                     KITTTFYQKYYNDTKLRRIILGSSPARRGSAVTGVPFEDAKHLQNETGIFIDKFYINQ
                     SSSDFLYDVMTEYGGCEAFYTDFYMNFVCPLGIVRMNAKGNEVNCNYYENKKLQEALK
                     PIILESLQNQIDCGIDTSVCYCIGSGENFNFLSKINEEHHFFDTIIPLEHPRFIMQYN
                     SKNKDVYMEKYLCALKS"
     gene            complement(29572..30099)
                     /locus_tag="U0308_000242"
     CDS             complement(29572..30099)
                     /locus_tag="U0308_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HEM2315258.1"
                     /translation="MARLSQEIILNMAEKIIYEKGMEKTTLYDIAGNLNVTHAALYKH
                     YRNKEDLFQKLALRWLEETSREIFDWTQEAGQTPDDALHDWLWLLADTKKKRYKTDRK
                     MFLLYTDYIEQNEELVKNHVAHLAQKAEEVSGRTNQGNAIITAFTYFHNPYFASRWEQ
                     AGYAELFEDVWHIVK"
     gene            30260..30991
                     /locus_tag="U0308_000243"
     CDS             30260..30991
                     /locus_tag="U0308_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2315259.1"
                     /translation="MTNKRVAFILGGSGGIGKAVVQKLVEQNFAVVVHYSGNKAKAEA
                     LVENIVKSGGEAISVGGDVADEAQMTRAFDFIESQFGGIDVVVNTAGIMKLSPIATLD
                     MDEFDLIQRTNVRGTFVVSKQAALRVRDGGAIINFSTSVTRTSFPTYGAYVASKAGVE
                     SLTLILARELRGKDITVNAVAPGPTATPLFLTGKDDKTIDNLAKATPLERLGQPEDIA
                     ETVAFLAGPARWVNGQVIFTNGGLA"
     gene            complement(31038..32231)
                     /locus_tag="U0308_000244"
     CDS             complement(31038..32231)
                     /locus_tag="U0308_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2315260.1"
                     /translation="MNQVKGEKHSLMVLLVLFIGYTSVYVDKYTIGISLVTVSQDLGF
                     DPSQKGLILSAFFLGYTLFQIPMGYLNNRIGARPVLAVSIIIVGLFLVIFGFGYSLLF
                     LVVIRFLSGALGHAGYPPSVSNYISLHIPLNKRGFAQSAMLASSGFAAFIGPLLIAQL
                     LLSVGWRNTYYWIGIAVILIGFLILIVVPKAPKIDLNAQKEKIKVPFSELLKDKQLWI
                     LLLSALFINAANYGLTSWLASYLNEVRGISISEVSYISSLAGLCILIAGVVGGYFISR
                     FFKGKEPIIIFAFCVLGAFAVYGVYLFEQLALSVICLCLCNIFLIMAFTTLMGLPHKL
                     FQQSHIATKYAAINSGGVLGGFFAPMIIGDLVNATNSYQSAFLFLALTLLASGLIVLA
                     IKKDQ"
     gene            complement(32319..33509)
                     /locus_tag="U0308_000245"
     CDS             complement(32319..33509)
                     /locus_tag="U0308_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEM2315261.1"
                     /translation="MRTKLMNMLQERKDEITQIRRHLHEHPELSFHEAETAKFIQDFY
                     KGKDVEMATEVGNGHAVVVTIKGGKPGKTIALRADFDALPIEEQTELPFKSKKPGVMH
                     ACGHDGHTAYLLVLADCLIQLKENIPGTIKIVHQHAEETPPGGAKSVVESGILDDVDQ
                     IFGIHVFPFGESGQVYYHSGFAMAGRTYFKLKIQGVGGHGSSPHMANDAIVAGAYFVT
                     AIQTVVSRRLNPFDTGVITIGSFDGKGSFNVIKDAVELEGDVRYMNTENRDKMDAEIH
                     RIVAGMEAMFGVTVELTYTNDYPPLYNDPAVTEQVVASLQKGVGEYLTGISEYDMLSG
                     SEDFAYYLQKIPGVFFYIGAKPKNTSNAYFNHHPKFDIDEDALLVAAKSVADVVLDYY
                     KLNG"
     gene            complement(33525..34925)
                     /locus_tag="U0308_000246"
     CDS             complement(33525..34925)
                     /locus_tag="U0308_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2315262.1"
                     /translation="MTSTAYKGTNKLIVGIVFGVITFWLFAQSMVNIVPAVQSDLGIS
                     SDLLSIAISLTALFSGIFIVVAGGMADKFGRVKLTYIGLILSIIGSLLLVVTQGATLL
                     IIGRIIQGLSAACIMPATLALMKTYFEGADRQRALSYWSIGSWGGSGICSFAGGAIAT
                     YMGWRWIFIISIVFALLGMLLIKGTPESKVVQNTKAKFDSFGLVLFVIAMVCLNLIIT
                     RGSTFGWTSPITITMLVVFLISAGLFFRVELRQANGFIDFSLFKNKAYTGATLSNFLL
                     NAAAGTLVVANTYVQIGRGFTAFQSGLLSIGYLVCVLGMIRIGEKILQRVGARKPMIL
                     GSGITAVGIALMALTFIPGTLYTVLVFIGFALFGIGLGMYATPSTDTAISNAPEDKVG
                     VASGIYKMASSLGGSFGVAISATIYGVIALSGNIDLAAMVGLLTNVGFCVVSLISVAI
                     TTPSAKKALELKAAKE"
     gene            complement(34925..36127)
                     /locus_tag="U0308_000247"
     CDS             complement(34925..36127)
                     /locus_tag="U0308_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEM2315263.1"
                     /translation="MEVWTMKEKLFQKLDEKRDRMIEIRRYLHEHPELSFQEENTAKY
                     IADFYKEMDCDVRTHVGGNGVVVTIDTGKPGKTLAIRADFDALPITEETGLAFASKNP
                     GVMHACGHDGHTAYMLILGETLIEMKQELTGKIVILHQHAEETPPGGAIQMIQDGALD
                     GVDNVLGIHVMSTMKTGEVFYREGAIQTGRSYFKLKVQGQGGHGSSPHLANDAIVAAS
                     EFVVAVQTVISRRLNPFDVGSITIGSFDGKGSFNVIKDAVELEGDVRSMSEEARNIIQ
                     KEITRIVSGIEAMFGVTCELDYKNDYPVLNNDEALTDFVVKSIKGAKIPEITDVVRCE
                     PQPPSEDFAYYAKERPSSFFYVGAMPADGHFYPHHHPKFDINEDSLLIASKAMGACVV
                     DYLKGENN"
     gene            complement(36321..38663)
                     /locus_tag="U0308_000248"
     CDS             complement(36321..38663)
                     /locus_tag="U0308_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014589156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2315264.1"
                     /translation="MSHLKDYTIGIQHIKQLTSEISLGTKLVFAISGQITIKVSEQKF
                     YLQEGDVLVLDRNTFYTIEGNEDNLFINLTISDTFFAHYYEDYFQHSFKFFSKESDPG
                     RERVVGSLRKSVSELLIASATKKRANKLEAQSALFQILLLLTRFLKKGIPSSARKEVN
                     DKRISRIIREVEERFDEALSLREFAQKEFLSEAYLSRYFKKTTGLGFLQYLTEVRLKH
                     AIQDLLHSAESITEIALKNGFSSQKHFSEVFKFHFELTPSEYRAEHHVETNLLIDNKT
                     SELGASIEQIVPSPEILVKLSRLYHDVEPGKELNKAPFEKKKIDITEKTERCLSENMN
                     ILTIGELKEVLKDNVQKQIITTRDEIGINYIGIRHLFRGSTFLPETETDELVPTSSPY
                     ANADLALTFLKQQNLQLFIRLEYQDIVGDEAAVFERLDHFLKHCMQVFGREFVSKWHF
                     MFFEPKNTYADKEELKKLYLKIYHTIKSRFPAIQVGNFVPFSLSKNAVPERHTWFLEE
                     ADKMDFVAYNANQNEAVDFSKEDMKSFSISEDYCLSKTLQLKAFLKHHHINKPLMLVN
                     WNTLSGNTRYTNGTFFRGALVLKTMLDLVPEVDALGFWINTELHEGDDSKLNISLDGI
                     EMFHFFNGKRPAFYAVKFLRRLKGVVVAKGEDYIMTKHADGYQLILMNCATINPRYSV
                     EERFIKEEQKEVHIRLTGLYAGDYQVCKWQFDRDNGALYSKYWQLNSKYGLDKEILDY
                     IVDASQPTLTVSDETITEDWSFYAYLDINAIHFYEFRSTV"
     gene            38876..41626
                     /locus_tag="U0308_000249"
     CDS             38876..41626
                     /locus_tag="U0308_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2315265.1"
                     /translation="MKTSKIIIASLVSLTLVSNPILTFAATNDVIDNTTEITTDKETS
                     PTQPTIKNTLKAGQTQSFNDWFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHN
                     SSIADMTGIEKLTGLTKLICTYNNITTLDLSQNTNLTYLACDSNKLTNLDVTPLTKLT
                     YLNCDTNKLTKIDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVT
                     PQTQLTTLDCSFNKITALDVSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLT
                     EIDVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAE
                     GCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTKLDVSHNTKL
                     KSLSCVNAHIQDFSSVGKIPVLNNNLDAEGQTITMPKETLTNNSLTIAVSPDLLDQFG
                     NPMNIEPGDGGVYDQATNTITWENLSTDNPAVTYTFTSENGAIVGTVTTPFEAPQPIK
                     GEDVTVHYLDDKGEKLAADEVLSGNLDDPYTSSAKDIPDYTLTTTPDNATGTFTTTSQ
                     SVTYVYTKNIVAAEPVTVNYVDDTGKTLAPSETLNGNVGDTYNATAKQIDGYTLTTTP
                     NNATGTFNTSSQTVTYVYTKNIVAAEPITVNYVNDTGKTLAPSETLNGNVGDTYNATA
                     KQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNPAPEKGVVEIHYVDENNKQLSSATK
                     ISGTVGDNYTTEPKNIDGYTLTTTPDNATGTFNTSSQTVTYVYTKNIVAAEPVTVNYV
                     DANGKTLAPSETLNGTIGDTYKATTKQIDGYTLSAEPTNATGQFTNSAQTVNYIYTKN
                     TNIDQPLPDKKTTKPSNLKTTEVKKASDTLPKTGDSTPWKSALLGVFLSSTALVIWKK
                     KK"
     gene            complement(41671..41994)
                     /locus_tag="U0308_000250"
     CDS             complement(41671..41994)
                     /locus_tag="U0308_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic metallochaperone ArsD family protein"
                     /protein_id="HEM2315266.1"
                     /translation="MKQISYFYSAENESEINLEIWKMFMNQSEDERKIHFDYTGIVFD
                     IQLGEVGKVDLPERVQMLIDKNGMEALPILVVDDAVYNYGEFSVIDAVEELLDVGVSI
                     QVEED"
     gene            complement(42002..43243)
                     /locus_tag="U0308_000251"
     CDS             complement(42002..43243)
                     /locus_tag="U0308_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 domain-containing protein"
                     /protein_id="HEM2315267.1"
                     /translation="MVNIRPFKAIRPIKNLAEKVASLPYDVLNSEEARELGDANKYSF
                     LHIDKAEIDLDPAVSPYDPAVYQKAADNLEQFELDGWLGREANPAFYIYQLTMDGRPQ
                     TGLVVCTSIDDYTNGKIKKHELTREEKELDRIRHVDVCDANTSPIFLTYRGKEAINAL
                     VESWVNENEPEYDFESFHGVAHKVWAITDAHILEDLSAAFSEVPALYIADGHHRTESA
                     VKVGLKRREEFPEAGPEAEFNFFLSVVFPEEQLEILDYNRVVNVPIEADFLSKVEASF
                     DVEKVGKEAFKPEKPKQVGMYLDGNWYKLTAKSEVIPNDVIGQLDVSILQSQVLTPIF
                     GIEDIRRDNRIDFVGGIRGLEELTRLVDNGSYSVAFAMYPPTMDDLLGVADAAEIMPP
                     KSTWFEPKLLSGLFVHDLESK"
     gene            complement(43332..44519)
                     /locus_tag="U0308_000252"
     CDS             complement(43332..44519)
                     /locus_tag="U0308_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEM2315268.1"
                     /translation="MFNIQTFNAIAKEGLKTFDLEKYVIDANQPADGILLRSYNLHDF
                     DFPETVKAVARAGAGVNNIPVENCSEKGIVVFNTPGANANAVKELVLASLFVSARPIL
                     EGTEWVKELPAEDDVEQKVEAGKKAFAGTELAGKKLGIIGLGAIGALVANDALSLGMD
                     VVGYDPFVSVDTAWRISKEVERAMTIEEVLATCDYLTVHVPLTDKTRGMFNADTLQLV
                     KDNAVLLNFSRGELVDSASVKEALDDGLLRLYITDFATKELLNHKKVHVFPHLGASTE
                     EAETNCAKMAAKELQSYLETGSIKNSVNFPNVEMPYNGHPRIGICHKNIPNMVGQITT
                     ELGKYSLNILDMINRSKNEYAYTLIDIDKETQANLEQLKSDLLAVQGVLRVRVIEPLG
                     VTV"
     gene            complement(44512..45603)
                     /gene="serC"
                     /locus_tag="U0308_000253"
     CDS             complement(44512..45603)
                     /gene="serC"
                     /locus_tag="U0308_000253"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HEM2315269.1"
                     /translation="MERVYNFSAGPAVLPVPVLEKVQRELLSYNGSGMSVMELSHRSE
                     LFQNILDDAESLIRELMEIPENYKVLFLQGGASLQFDMVPMNLANGKKAAYVNTGSWA
                     KKAISEAKKIQGVEVEVIASSEDRNFSYIPEIPTVSSDAAYLHVTTNNTIEGTAMFDV
                     PDSAVPVVADMSSNILSSVYDVKKFGLIYAGAQKNIGPAGLTLVIVREDLIGQVEGLP
                     SMLDFKVQAENDSMYNTPPTFAIYVAKLVFEWIKEQGGVAGIEALNRKKAALLYNYID
                     QSDFFSSPVEPSARSLTNVPFVTNSAEFDKAFVQEAEANGFKNLKGHRSVGGMRASLY
                     NAFPIEGVEALIAFMEKFANARKGGEVRV"
     gene            complement(45974..47122)
                     /locus_tag="U0308_000254"
     CDS             complement(45974..47122)
                     /locus_tag="U0308_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2315270.1"
                     /translation="MENKTRLWTKDYVFLLLGSVLLYIGFMVFMPTLPARIIELGGTQ
                     MEASLAVGLFSIVALLMRAIAGSWNDKFGPKVLIIVGFLILILTTVNFYWSTAVAALL
                     ILRLFHGAGWGIGTTSIATGVSKLVPPSRTGEGIGFYGLTTALGMSLAPIIAILIMNY
                     FSFDVLVTFSLVLMVFILILMTQVKIPKSEKIVHQKMKLFEKTALLPAGLCLLMAIPL
                     GGIQTFMMVYGTELGISTTWIYFIGQAIMVLVSRLFAGRLYDTKGHRFVIIPGALSMI
                     IGILILSFATGAISLFIASLFFGLGYGMSQPALQALAVDRAAPHNKGTANGTFLSGMD
                     IGMAVGSFGLSIVATYYNYAIMYRTAIIALVVFFAVYWFTLGRKVKNS"
     gene            complement(47136..47558)
                     /locus_tag="U0308_000255"
     CDS             complement(47136..47558)
                     /locus_tag="U0308_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2315271.1"
                     /translation="MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLEGIE
                     ANEPISQKEIALWTKKDTPTVNRIVDVLLRKELVVREVSTEDRRISLLSLTDKGRKET
                     NELRDIVEASCERMFAGISRADLEQFTAILKNISTNIE"
     gene            complement(47661..48014)
                     /locus_tag="U0308_000256"
     CDS             complement(47661..48014)
                     /locus_tag="U0308_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315272.1"
                     /translation="MVTAIQKEQVRTEKNAAFLTSRPEVDYLERESFFITLKDAIKRE
                     WVVRLKYFQEADVSSLRLAPFEYPSAFLGLGEIETQDLVPLEIDMLTEEVILKDIVGY
                     EYVIEFRDIIDVELL"
     gene            48208..48807
                     /locus_tag="U0308_000257"
     CDS             48208..48807
                     /locus_tag="U0308_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEM2315273.1"
                     /translation="MTNTFLDSIKVRRSIYALDKNVSVEDSKIEEIIKDAVKYSPSSF
                     NSQSSRAVILLGENHDKLWNIVEDTLRAIVPAENFAATEEKVGSFRAGYGTVLFFEDT
                     AVIEGLQENFALYADNFPVWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKA
                     EWNIPASWNLRAQMPFGNIVQEAGEKEFIDDADRFRVFK"
     gene            complement(48865..49185)
                     /locus_tag="U0308_000258"
     CDS             complement(48865..49185)
                     /locus_tag="U0308_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEM2315274.1"
                     /translation="MAIIFAKEENLEEIISSHPKILLNFWAEWCAPCRCFWPTLEQFA
                     EMEEGNVQVVKINVDKQRALAQKFDVKGIPNSLVLVDGEIKGGIAGIVSCDELRSRFK
                     SLAK"
     gene            complement(49308..49970)
                     /gene="pgmB"
                     /locus_tag="U0308_000259"
     CDS             complement(49308..49970)
                     /gene="pgmB"
                     /locus_tag="U0308_000259"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HEM2315275.1"
                     /translation="MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNE
                     KLKGVSRIDSLLLILKKDGRENDFTEEQIEALAADKNDFYVSLLKEITPADVLPGIKE
                     LIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACR
                     GLGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKNTGLLDLRILEILH
                     SK"
     gene            complement(49967..51088)
                     /locus_tag="U0308_000260"
     CDS             complement(49967..51088)
                     /locus_tag="U0308_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEM2315276.1"
                     /translation="MKIVIAPDSFKESLTAHEVAEYIKEGFQEIYPDADYHLLPVSDG
                     GEGTLEILSKALGAKKMKIDVSGPFGDPVSAQVAFTDGNKKALIEMAEVCGLHLVPTT
                     RRDPLQVSTKGVGELILHAMEKGATEIIIGIGGSASNDGGIGMASALGYEFLDAENNI
                     VNPIGANLADIATIRSEKVPAELENITVNIVTDVENPLCGEAGASYVFGPQKGLAVTD
                     LATADGAMRQFYQLANPAMVTMPRAGAGGGIGAGLVTFAKANLLSGIDFVIEALQIKT
                     VCEDADLVIVGEGKMDGQTAQGKAPVGVAKVVPKETPVFAICGSVGEGLEAVYEVGIS
                     AVFPSIAKPATLENILKETPNNLRRTARNVAAVWKGRVE"
     gene            complement(51085..53262)
                     /locus_tag="U0308_000261"
     CDS             complement(51085..53262)
                     /locus_tag="U0308_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HEM2315277.1"
                     /translation="MKKIIEKEFALNYLNKYGSQMTVGNGYLGVRGALEEEYPEQVRG
                     MYVAGIYNRPSGSLSSELVNLPDVTRFQVMLDGENFSMQAGKVHAYERYLDMNTGELI
                     RKITWESSAGKKYQLNFHRFVSKAAKHVIAAKVEIMPLSGAAKVKVKTGIDAQQTNFG
                     TQQLAELSLRIFDEKLMVGEYETIESKQHITIATKVNKKGIFTAKNRQLMTEVEQEIA
                     ENQLFTLEKISMVKTSLDQVDAELPNTTYAELKRASETLWADFWEHAGVRVESTNDFD
                     QFALDFACYHLEIMTPKDDFRCSVGAKGLTGEGYKGHVFWDTEIFIMPFFLYNKPEIA
                     KQLLKYRYLHLKEAKEKATKNGYNGALFPWESAFSGEEETPEFAAINIRTGTRQKVAS
                     AISEHHLVADIAYAVCEYETATKDAQFMKECGSELLLETAEFWLSRATNRNGRLEILD
                     VIGPDEYTEHIDNNTYTNYMAHYNVKKALEWNKDNADFVARAEAFLEKIYLPVANESG
                     LIPQDDTFLEKDWINLDKYKAAQGTQGILLDYSRQEVNELQILKQADLVMLFYLFPRM
                     FAPDAVKQNLDYYENRTIHDSSLSKAIHAIVENRTGNRAQAYQFFQEACLIDLGSEPH
                     SSDDGLHAASLGAIWLAVVFGFAGIDTSGELLEIAPNIPDSWQSVAFEFSWKGEKILV
                     EIAQNRLHLSKSTKSVLELVIHGEKHQLTDTLTIKLDQKDVSL"
     gene            complement(53259..54290)
                     /locus_tag="U0308_000262"
     CDS             complement(53259..54290)
                     /locus_tag="U0308_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2315278.1"
                     /translation="MKKRVAIIGAGQVAEKVHAAYYKTRNELELVAVCDPSLERGEEF
                     RANNGFEKHYATAEEMFAVEKIDIISICTPNRFHFDNVMLSLANGAAVMCEKPPAMSA
                     AEAKAMWELAEEKGAILAYDFHHRFSSEAQFLKRNSALLGEIYCVKATALRRSGVPGW
                     GTFTNKEMQGGGPLIDMGIHMLDAAMFVLGFPKVKKVTAKSFQKIGTKKSAGTFGSWD
                     PEKYTVEDSLFGFIELENGGLIELDTSFALHIKPESALNVDFFGDLAGGSLYPAEIYT
                     DNAGEFQLLEKLGQLEENKHENSMKAFVDSVLGAGKVELAGAEQGYIIQRIVESLYES
                     AEKGESVSL"
     gene            complement(54347..55141)
                     /locus_tag="U0308_000263"
     CDS             complement(54347..55141)
                     /locus_tag="U0308_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEM2315279.1"
                     /translation="MKLGTQNQAFFPENIEEKFAYVKEMGFEGFEIDGKLLVENLDEV
                     KKAIEKTGLPVSTACGGYDGWIGDFIEERRLNGLEEIKAILEALAEVGGQGIVVPAAW
                     GMFTYRLPPMVSPRSQAGDFKAVSESLVYLDKIAGETGTKVYLEPLNRYQDHMINLLS
                     DAQKYIDENELKNVEIIADFYHMNIEEDSIPTVLETYKDSIGHIHVADNHRYQPGSGS
                     LDFKTSFDQLKKNGYNGFLTFECRVRSENPEQAYKDALAHLKSCLI"
     gene            complement(55154..56206)
                     /locus_tag="U0308_000264"
     CDS             complement(55154..56206)
                     /locus_tag="U0308_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase"
                     /protein_id="HEM2315280.1"
                     /translation="MKKLVATAPRVAELVEYNDREVLEDEVKIKVQFASPKHGTEVVD
                     FRGISPFIDEEFSPEWNLFVSRETNSARGIVFGEFQLGNMVVGEVVECGSKVTEYELG
                     DIVCSYGPIMETVIVKAVDNYKLRKLPKGANWKNAVCYDPAQFAMSGVRDAHVRAGDY
                     VVVVGLGAIGQIAIQLAKKAGASVVIGVDPLSHRREIAEKHGADATFDPITTDVGLEV
                     KRLTGKLGADSIIETSGNAAALQAALRGIAYGGTISYVAFAKPFPEGFNLGREAHFNN
                     AKIVFSRAASEPNPDYPRWDRKRIEETCWELLMNGYLDCSDIIDPVVPFADSAESYMK
                     YVDQQPDLSIKMGITL"
     gene            complement(56225..57076)
                     /locus_tag="U0308_000265"
     CDS             complement(56225..57076)
                     /locus_tag="U0308_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM2315281.1"
                     /translation="MAVSSKKSKRTKKIAFYVTMVAFLCITLFPFAIMLMTSFKSSKE
                     AISTHPTFFPKEFTFQHYIDIFNPDIFPFLTYFKNSLVVSVFAAGIAVVLGILGAYAL
                     SKLRFKGRMTINASFYTVYMFSGILLIVPLFKIISSLGLYDTETALIITMVVQTLPTA
                     VFMLKSYFDTIPTDIEEAAMMDGLNRFQIILRIIVPLAISGIVSVFVYCFMVAWNDYL
                     FASIFLSSAEKFTLPIGLNTLFSTPDYIWGRMMAASLVTALPVVIMYAISERFIKGNL
                     TDGGVKG"
     gene            complement(57063..57944)
                     /locus_tag="U0308_000266"
     CDS             complement(57063..57944)
                     /locus_tag="U0308_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2315282.1"
                     /translation="MKTKVYKRSDFKLAMILLAPSFVLLAALVLYPMISNIQISFLDM
                     PLNPNIKSVFIGLQNYIDILKDPEFYKSLGLTVAYTVLVVVGSTGMGLLVAIFFNREF
                     RFRRTARSLIILSYVTPSISLIFAWKYMFNNGYGVINFMTVDVLHLFKEAPLWFDNPV
                     SSFFLVTFFAIWRYFPYAFISFLAILQTVDKSLYEAADMDGANIWDKFKIVTLPAIMP
                     VLATVITLRAIWMFYMFTDVYLLTNKVNILGVYLYKTAFAFNDLGKAAAISVILFVII
                     FVVIIFARKRVDLNGGK"
     gene            complement(58020..59312)
                     /locus_tag="U0308_000267"
     CDS             complement(58020..59312)
                     /locus_tag="U0308_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEM2315283.1"
                     /translation="MKKKSLVLLVVVLVLSAVLAACGGKESSSKEVTIEFMHSSVEKE
                     RLDVINKLIADFEKENPTIKIKQIPVEEDAFNTKVVTLARSGKLPAVMEVSQDFAKVM
                     DKDELIDQDAVKEVIDSVGEDKYYEGATNLVRSEDGKSYIAAPLSGWVQGIWYNKKAL
                     ADAGFEEPKNWADIEKVAKKFTNKADKKYGIAIPTAESTMSEQAFSQFALSNKANVLD
                     AKGNVTIDTPEMKEALQYYKDLSAYTMPGSNDVTEIKDAFMNGTVPMAMYSTYILPSV
                     YEEGDPKNIGFAIPEEKEKAVYGTVSGLTISAGLDDEQKKATKKFVEYLSQPENMATW
                     VLMSPGGAQPVNKEVVEQKAYKENEVIKSFGELPNEIAASFNDIQVFGLVDGKNLTKM
                     GDITSSGIIAQMVNNVTVGGGDVSADLKAAQKKAEEGK"
     gene            complement(59309..61009)
                     /locus_tag="U0308_000268"
     CDS             complement(59309..61009)
                     /locus_tag="U0308_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphorylase"
                     /protein_id="HEM2315284.1"
                     /translation="MTNLRKRLSRLYAEDVVDSLAARIEARVQQTQQRKLTRKDQWDE
                     KDIVLITYGDQFKEESKKTLKTFKKMYDSYLKSTFEVVHFLPFYPYSSDDGFSVIDYK
                     AVNPELGDWEDIKEMEQSARLMFDFVCNHMSAKSDWFKRYLAGDEEFRNFFVEMDPKM
                     DLSSVTRPRATPVLTPFQFDSGKVGHIWTTFSEDQIDLNFASPEVLYKMIDVLMFYLE
                     EGAEYVRLDAVGFMWKVPGTSSIHLEETHEIVKLFRDLVDIAAPGTIIITETNVPHVD
                     NISYFGNGEKEAHMVYQFPLPPLVLHAIHHGNAEFLRNWAKNLELPEGKRTFFNFLAS
                     HDGIGLNPVRGIIPEAEILALVNDLEEEGALVSYKQNPDGSKSPYEINVTYMDALSKQ
                     ADTDDLRMSRFLVAHAVLMSIPGVPAVYVQSILGSRNDYSGVETTGHNRSINRKKYDL
                     AEITAELEQRGSLRKATYDALTKLISTRKAESLFHPEIPMEVLESTAELFVVKRSSDV
                     ESIILIHNLSEKEVSYSLDSGVYTNLYTGSTVTGSDSIKLSGYEFCWLKTKNYREEQK
                     "
     gene            61234..62259
                     /locus_tag="U0308_000269"
     CDS             61234..62259
                     /locus_tag="U0308_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2315285.1"
                     /translation="MASTIYDIAKHAGVSKSTVSRVLNNQANISEESRKKVLEAIDEL
                     NYQPSKLARALTSSGFDAIMVISNRSTTTTTGNPFFSEIIQSISTQAELENFDLILQT
                     AKNSEDELKKCLSKIQEKMIKGIIMLSSPADEDFFHQLDPYNIPIVVTGKVEGHYKNI
                     YSVDTDNFGDSYALTKHLIKQGHQKIACIHAPLDYHVSIDRLAGFRSCLFDHQLDLRN
                     DWIIDSGYSIEDSYKAALRLMEGPDKPTAVFATDDLKVLSIYKMAADKNLQIPADFSV
                     IGYNDKVASSFLSPPLTSIDIPINKLGKKATNLLFRLIHQDKNVPKTTIIKTEMIERE
                     SIQKINV"
     gene            62280..62352
                     /locus_tag="U0308_000270"
     tRNA            62280..62352
                     /locus_tag="U0308_000270"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:62313..62315,aa:Val,seq:gac)
     gene            complement(62396..64390)
                     /locus_tag="U0308_000271"
     CDS             complement(62396..64390)
                     /locus_tag="U0308_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEM2315286.1"
                     /translation="MTKEYYFIKPELSSPETKQENIDSWLKTQDKTFYDAQIAQERDY
                     CFWCNIVETAKPNSRTSYTSMAYTLNEPNMLNSAGKTSFILSEEEVLYIHTLSVVRDG
                     KVIDKLDDINVKVLDYVRDENQASFNDEKKVTVLIRDLHLNDIFIVETTIERKYEESS
                     IRNDFFRWIYSAPNSYWAYGKYRFELKNETEKKLEANFHYFRDEAGAILEKDKVMVEH
                     NESYTIEKEDYIGEDAKELEITPFVDFVTEQSYPQITKTISDIYQKFYQVNLAEFAAD
                     IVAELDELPTLDHKIKHAIDFVQKEVYYLYNETEMDGHEPQAAEVTYKTKQGDCKAKT
                     VLLKVILDYLDVNSELILVNYGSDVFLPVYTPSPFNFNHAILKITHNNQVYFIDATMS
                     SDQGFLANRQKNSFMYYLEIKSGTELQKQEPFQDEIPSVEEVVYCDVKDNAAEITFER
                     KLRGGMANGSREMFKNDSNKDIINRYNFSIYSNMTLYKKYEENEVDSHFSNTSIQIVE
                     DNKDLNELSIIYKATISDPYIVENKKRYLHFWNWNNFIDDGAEKHFHKDFPYWIDRNV
                     IKTELHLTTDKSIDQQERYTRQECDIKSKYLNHRMTKKIHKNGASCYLEYRPYHNLTI
                     KEKDLEEYVEANKEILKSNWGIGIDIIEDGLFKKLGKLFK"
     gene            complement(64523..65065)
                     /locus_tag="U0308_000272"
     CDS             complement(64523..65065)
                     /locus_tag="U0308_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2315287.1"
                     /translation="MENRKQMIKTERLFLSEMTLADTEILFGYWSDDSVTRYMNIEPF
                     QSLQPVEEMIRMLRQLEIEGKALRCVIILQVTGEIIGTCGFNYIDHENHRAEIAYDLG
                     TRFWKRGYATEAVRALMEWGKESFELHRIEAKVDPRNSASIALLEKLGFSKEGLLRDY
                     EKIGETYQDVQLFSWIDEIQ"
     gene            65221..66633
                     /locus_tag="U0308_000273"
     CDS             65221..66633
                     /locus_tag="U0308_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2315288.1"
                     /translation="MEQTNKRNTLALISIMLGAFISLLDTTIVNVALPDITTALHATS
                     ETIEWVISGYALAFGLVLILAGRLGDKFGRKNIYIIGITLFLIMSVTAGFADSENSLI
                     ISRVIQGLAAGLFFPQINATIMDMYSGKSLGKIFGILGSVIGVGTAIGPLTGGLLIEL
                     FGTTNGWRAVFFVNVPFVLVTLVLAMLYLPKRTVSTKKISFDLPGVGLLTIALLLLLF
                     PLISNGANDFKPIDYLLMALSIPLFIILYKWSVYQEKKGNQPLIAPNLLKNNQFVSGM
                     LLSLVYFAAFTSIFFVLSLTWQTGFNRSAILSGLAISPFALGSVLAASNSYRLIPILG
                     RKLLMLGVALVIIGLGTVSIVFHLNDGAFSAWLLFLPLFIAGIGSGLTIAPLNSFTLS
                     TVTGVDRGGASGMFNTAQRIGSSFGIAVVGSVFFRTLGNTAATSKASAFSDSLQMSMY
                     VNIVLLVVCFLLVFRLPKNI"
     gene            complement(66674..66988)
                     /gene="rhaM"
                     /locus_tag="U0308_000274"
     CDS             complement(66674..66988)
                     /gene="rhaM"
                     /locus_tag="U0308_000274"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HEM2315289.1"
                     /translation="MERVASIMYLYPGNQEEYKKRHDALWPEMKEALKAHGAANYSIF
                     LDEKTDTLFAYVEVEDKAIYDKIAETEICQKWWKYMAPIMKSNPNNSPVALDLKEVFY
                     LA"
     gene            complement(67001..67822)
                     /gene="rhaD"
                     /locus_tag="U0308_000275"
     CDS             complement(67001..67822)
                     /gene="rhaD"
                     /locus_tag="U0308_000275"
                     /EC_number="4.1.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulose-1-phosphate aldolase"
                     /protein_id="HEM2315290.1"
                     /translation="MTKDIMDAVFIKEMAKTTSNLYRLGWDERNGGNITYLLDEKEVV
                     EYLDVKQIIRTIPMDFDGKKLAGKYFLVTGSGKYFKNVEEAPAVNLGVIQVSEDGKAV
                     HLLWGYTDGGLPTSELPAHFMSHIARLSVDPENRVVMHCHATHLLAMTFTHELTEREF
                     TRTLWQMCTECLVVFPEGVGIIPWLVPGTNEIGEATSEKMKENRLIVWPHHGIYGAGK
                     SMDETFGLIETAEKAAEVYTIVMSQGGIKQAITDEQLKALGERFGVEAKAGYLIN"
     gene            complement(67835..69097)
                     /gene="rhaA"
                     /locus_tag="U0308_000276"
     CDS             complement(67835..69097)
                     /gene="rhaA"
                     /locus_tag="U0308_000276"
                     /EC_number="5.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose isomerase"
                     /protein_id="HEM2315291.1"
                     /translation="MGQETEISKRYQVAKERYQAIGVDTEKALKTLKDIKISMHCWQG
                     DDVKGFLNPDGELTGGIMATGNYPGAAHTPKQLRQDLEKAYSLIPGKHKLNLHAIYVD
                     TDEKVDLNEIEPKHFTPWVEWAKEQGLGLDFNPTFFSHPMFKDNYTLASPDKEVRDFW
                     IEHGKRSRKISEYFGKELGQTSINNFWVPDGIKDCPIDRYTPRKRLMEALDEVFAEKL
                     DEKYTQEAVESKLFGLGAEAYTVGSHEFYMGYGITRDKLICLDAGHFHPTEVISNKLS
                     SLALFSKGVMLHVSRPVRWDSDHVVIMDDELIEIGRELVRNDLLGITNIGLDFFDATI
                     NRIAAWVVGTRNTQKSLLKALLEPTADLKKMELENDFTSRMAITEELKDFPFGDVWNY
                     FCEINGVPVGLDWLKEVKAYEEDVLLKR"
     gene            complement(69110..70561)
                     /gene="rhaB"
                     /locus_tag="U0308_000277"
     CDS             complement(69110..70561)
                     /gene="rhaB"
                     /locus_tag="U0308_000277"
                     /EC_number="2.7.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulokinase"
                     /protein_id="HEM2315292.1"
                     /translation="MKHYVAVDIGASSGRLILGKLVNEKLQLEEIHRFKNGFTYRDGH
                     ERWEIDQLMQEIFIGLEKVKQLGISECVLGIDTWGVDYVLIGASGEKLADPISYRDKR
                     TLNAVQNLTSEYPREYIYKKTGIQFMELNTLYQLYVEERDLLERAEKILLIPDYIGYV
                     LTGVKVAETTNSSTTQMLNLREQLFDKDLLSHLNIDVEKFAPLTDAGTYLGKVKEEWL
                     EEYDIPNCDVVTVATHDTASAVVGTPAEGENWAFLSSGTWSLIGMELSAPINNEAAFK
                     ENYTNEWGAYGTYRFLKNIMGLWIVQEIARMDDYKHSFAEMAEEASNYPYFKQIINVN
                     DARFNNPENMVDEIKLYCQETGQTIPETIGELTNCVYGSLALYYALELEKMTEITGKK
                     IEKLYIVGGGSNVAMLNQLTAKLAGIEVFAGPSEATAIGNLVVQMINQGEIESMRAGR
                     KIIRNSFEIGEFSCGDVRFEEIKERFTKVLEFN"
     gene            complement(70580..71848)
                     /locus_tag="U0308_000278"
     CDS             complement(70580..71848)
                     /locus_tag="U0308_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2315293.1"
                     /translation="MAGSSTSKKGTIAVSLTNYLDSGCIVAGASGLTLWATQFGLSSF
                     AVGLLGAVSANAFGSAIGALIGGHLADKYGRKFIYTYNMLVYMLGVTIIMFAMNFPML
                     LIGFLVTGLSVGAGVPASWTYISEMADPSIRARNIGISQFAWSCGPAIIFTLGIIVSP
                     LGLLGNRLLFLSLLIVAFVAWQLQRKLEESKDWEAEQVKMKESGNRLEHPFKTAFSSM
                     VNVKSVLFLVGVYLFWNLVAGAMGFFMPFVYETVGGLSNTQANLLQAVLWILTAASTY
                     FGFAKFGDRVSHRGLFFVGALMAVASWVVLTFVGMSWVGLWTFVILWGISAGIGAQAF
                     YALWSTELFPTKYRGGVQGVMFFLVRGSTGVWSIVFPVILANLGFTVAGTIMIGLLTV
                     SLLIGVIWAPKTRGRSLDDITKERYGNTID"
BASE COUNT        21209 a        16149 c        11656 g        22931 t
ORIGIN      
        1 acatatttat tattattttc actttctata ttaaaagtat aaatctgttc aaaaattagc
       61 ttaatactct tttgaagtat atcagtaacg cagaatttat gaactaacct aaaaaacaat
      121 cttttgacat acttacttgt caaaagattg tttcacgtga aacatattaa acgttaaagc
      181 ggaaatgaac aacatctcca tctttcattt cgtattcttt accttccaag cgtacttttc
      241 ccgcttcttt ggctgcttgc tctgagccgt attcaagtaa agcgtcatat gcaacaactt
      301 cagcgcgaat gaatccacgt tcgaaatcag tatgaatgat tccggcacat tgtggagctt
      361 tcataccttt gatgaatgtc caagcgcgaa cttcttgaac gcctgctgtg aagtaagtcg
      421 ctaagccaag caatgtatac gcagaacgaa tcaattggtc taaaccagat tcttcaattc
      481 caagcgcttc taaaaactct agcttatctt cgtcttcaag ttcagcaatt tcttcctcag
      541 cgcgagcaca tactacaata acttcagagt tctcactcgc agcgaattcg cgtacttgct
      601 gtacatattt gttatcgtcc ggactagaaa catcttcttc acttacattt gctacatata
      661 aaactggttt tcttgtaagt aagaaaaggt tgcgaacgat tttctcttct tcttcgttaa
      721 attcaatcgc acgagctggt ttgtcatttt cgaaagcctc acgtagttta actaaaacgt
      781 tatattcagc cacagcatct ttatcttttt gtttagatag cttctcaacg cgtccaatgc
      841 gcttctctac tgtttctaag tccgctaaga taagttctaa gttgattgta gaaatatcgt
      901 ctagcgggtc tactcggcct tctacgtggg tgatattttc gtcatcaaaa caacgagtta
      961 catggcatat tgcatccact tgacgaatat gggataagaa tttgtttcca agtccttccc
     1021 ctttactagc accttttaca attccggcga tatctgtaaa ttcaaaagtt gttggaacgg
     1081 tctttttcgg ttttacaagt tccgttagtt tgtttaatct gtggtcagga acttcaacaa
     1141 ttcctacgtt cgggtcaatc gtcgcaaacg gataattcgc agcctctgct cctgcttttg
     1201 tgattgcatt aaaaagtgtc gatttcccaa cattaggaag cccgacaata ccagctgtaa
     1261 gtgccattat atataaactc cttttcatta acttcatttt gaaaatgcct gtcaaataga
     1321 cattttttca ctaacgtata ttataaaggt ttttcaaaca aaaagccacc caccaaaaaa
     1381 cgaaaaccct ttaatcagta aaggattttc gttttaatta cttcatctct ttccaaatag
     1441 caatcatctc ataagctaca tcgcgtaatg tataagttgt cataaattga tcttccgcgt
     1501 gcatgaagag gatagaaatt tgtacgtctc cgccatctgc ctctttttga attagttgca
     1561 catgattttt atgaccttcg ctaagaaatt cattagcctc gtcaattttt ttatatgctt
     1621 ctgtgaattt tctttgtctt ccgaatttca tcgcctcaat aatgcaactt cttgcggcgc
     1681 caacagaact aattatttga aatgatgcga gttccattcc ttccattttc gctagcctcc
     1741 tatgattgaa actcgccctg ttaatttagt atcagaactt ccaccaacga aaatttctat
     1801 accaccgggc tccacctcat atttattgtt aattgaccat atttcaaaac ttgatttatc
     1861 tagcttaaat gtcactgtag ctgtttgttt cgctgcaata cgaacctttt taaatgcttt
     1921 taattctttt tttcttctag taatacttgc ttccatatca tgaagataaa gttgcacaac
     1981 ttcttcaccg gctacattag aggtgttttt taaagttact ttcacttcta cagattgccc
     2041 gccaaggagt tctgctattt ttatagattc ttgttttatc tgtaaatctt gatattcaaa
     2101 agcgctataa cttaaaccat agccaaatgg atagagcggc ttaccagtta aatcaaagta
     2161 gtcttcttta tactccactg ccttttgatt gtagtaaata ggaatctgcc cggaggatct
     2221 tggtatgctg actggtaatt tacctgaagg attgtaatga ccgaaaagaa cctcagcaat
     2281 cgccgttcca ccaacacttc ctggatacca agctgtgaga atcgcatctg ctgtcgaact
     2341 aatttctggg atagcgattg gtctaccttg aatcattacg acaattacag gctttccagt
     2401 acgcttcatt gcgtaaaaca aatctaattg cggttgtgga agcgtgatat cagcaacatc
     2461 cacattttca ccggcatcca tgttcgggcc cttagagctt accgcgccat tatttaaaaa
     2521 ttccatgtca aaattccgcg cacttgaacc accgagcacc ataacaatgg cgtctgcctc
     2581 tttagcaacc acttctgctc tttgaatgcc atccggaagc tcttcacgaa tttcagtacc
     2641 tttttcagaa acgacttccc aatttttagg aagcagtttt tttatccctt ctaacacagt
     2701 gacacattct gattcatttt gcggagctgt ataatctccc aactgattat aaagcgcatc
     2761 tatgctagga ccaacaacag ctattttttt ccgttcgcct actagaggta atgtttcgaa
     2821 gtcgtttttc aaaagacaaa taccctctct agcggcttgt aaatttagtt gtttccaatc
     2881 agacttcggt gcttgaattt cttcctctac aaacggttgt tcaaatagcc ctaattggaa
     2941 tttcacttga agcactcgcc tcacagcatc atcaacgacc ttttcatcaa gaatgccttt
     3001 ttccacgctt tcttcaagaa atggaaacac ttcatcccac aaactcaaat ccacaccggc
     3061 ttcaagagcc atttttgcgg ctttttttgg atcaggattt agttttaata atctatcaag
     3121 ggcacaccca tctgccataa caatcccgga gaatcccatt tcttctcgca aaatagttgt
     3181 taaaagctct ttgttcgcgt ggcatggcac cccgtcaatc tcgttgtaag ctgccatgac
     3241 gccaagagca ccacttctaa ttcccgcgcg cattggttcc aagaaaattt ctctaagttc
     3301 ccttacgcca atagaaactg gtccagaatt atgcccgcca atcggctcgc cttgtgccgc
     3361 aaaatgtttt aaaataacag caatcttccc actcgcttga aagccttctg taattgccgc
     3421 tgttaattcc gctgcaaggt atggatcttc accgtaacac tcttcagcgc gtccccaacg
     3481 tgggtctcga agtatgtcta atgctgaagc aagtgctaga tgaactccct tttcggaaat
     3541 ttcttctgta atcgcacttg cgacctgttt ttgcaactct ggattaaaag aagcagcacg
     3601 agctaaattt accggataag attcgctatc taacgcttgg tgaccgtgcg gaacttcctc
     3661 agctaatagt acaggaatcc ctaggcgcgt attttctatc acatagcgtt gaattttatt
     3721 agctactttg ccagcatttt tccgacttac acccgtgtcc ttattcattt tggaccatgg
     3781 atcagcgcgg aacagaccgt ataaagcgcc tataccttca aatctagtta cttcctcttt
     3841 aaatttttcc gtgatatgaa acgtttcgcc atctcttgaa aaagcttccc agccatacat
     3901 tctttggttt agttgaccac atttttctgc taaggtcatc ttggaaagta agtcttctac
     3961 acgttctgaa actggtttct ccttatccaa ataaacagcc atattctttc tcctccttgc
     4021 taaaaaacta agaatgtcac aataaactaa ttgctaaatc taatactttt tcaccattca
     4081 ttcgaccata atcaacgata tcaataactg ccaccgatac attatcacca actgtgtcta
     4141 tgaccttatc tttcatataa ttcacttgcg gtccaagtaa aatcgcatca gctttacgcc
     4201 aatttttttc gaaatccgtt tctgaaatag cccagatagt cagttctaaa ttacgttctt
     4261 ctacaacgcg ttccattttc ctcactaaaa cgcttgtaga cattcccgca ttacacatca
     4321 acataatatt tttcataaaa atccctccaa ttaggcttta attctgtcat tggcttttaa
     4381 gaatggtagg taaagaagta cgcagacgcc aatcaagaaa atttggaata ctgcagcacg
     4441 ccagtcccca cctgttgcaa ggaagccgga agcaacaact ggtgtcgtcc acggaaccat
     4501 tacgactact tctgaaatca tatgcagctt tgtcgcgaag taggctaaac ataagcaaag
     4561 cggtgttgaa ataatgaacg gaatcatcaa actcaagtta taaacaatcg gaaggccaaa
     4621 tactaccggt tcattgatat taaatagacc aggagctgcc gataaagtag ctatttcgcg
     4681 ataatctttt cgttttgacc aaataaaaat tgctattaac agcgcaatag tatttccgcc
     4741 gccgcccata acgccaaaaa catcacggaa agtagtatta ataatatgcg gaatctctgt
     4801 gtgattcgca aatgctgtca tattttcttg catatttgcc aaaagaactg ggtccataat
     4861 cggccctaaa atcccacttc cagcaatacc gatagaataa agcatttgtg aaatcgtcat
     4921 taacgttagg aaccctggaa cacttgtaac taagaatgtt aatggttctt gaataattgc
     4981 gctaattaaa gaatacaaat tcaagctgaa taatgtcact actaagaatg aaataaacgc
     5041 aaaaataagt attgttaaca ttgtcggaat aagcacattg aatgatttaa ttacggctgg
     5101 aggtacgcta tccccagaaa tatggatttt cattttctca ctcttagaaa gacgaatgaa
     5161 tacttctgtt gcaagaagcg ccgttacaat cccaacgaac atgcccgccg aacccatcaa
     5221 ggctattggt aatactccag caacttccac agatttctct gcaccaatcg gcacaatttc
     5281 tgttacagct gggataaaaa taacaatcag tgcaatggtc attaacgctg gtgcaaacgg
     5341 attttcaaac ttccggtttt gcgctaaaaa gtaagcaact gaagctccaa tcaaaatagt
     5401 aataattcct aaagtcccgt tcacaatact gttacctagc ccctgccaag tcgtaagtgt
     5461 ttcggaactg atgatcgccg acataaaacc atccggctta ataatcacgt tattaattaa
     5521 aaccatgaat cctgctaaca taataaaagg taaaatagta gcaaatgcat cacgcataga
     5581 ctttaaatga atttgatttc caagcttctg cgataaccaa cttaatttct cgatgaactt
     5641 tttcaatttt ttatacctcc tttgatatta caataagtgt agcgctttct ttttgttaaa
     5701 taaatctagt ctttttccgc atctgtattt tacatgcgga aataaaaaaa ggcccgttaa
     5761 cttttctctc taagaaagtc taacgaacct tttggttata tcgtttgtaa cacacgcata
     5821 aattcttcaa aacttgtcac acgttttagc tctcccattg cttttggact ttctactaaa
     5881 ttgctaataa gctcatacac cgtcgcaagc tgctgttgtt gcttgttttt taccgctaac
     5941 atgaaaatca cttgtgcctg atcttcctca ttccacttta ccccaccgcc agtaaaaata
     6001 catactccaa tagctgtttc ttggacgttt gcttcaattg ggtgtggtgc cgcaagtcca
     6061 ttacctaaat aagtcggcac aatttcttcg cgctcaaaaa gtgatggtaa atagtcctcg
     6121 ccaacaatat tattttccag caaaagactc gctaaatcta ccagaacttg ctctttgtcc
     6181 tttttatcac taattaagaa taacgattcc ttaaaaacct tgtccacttc aaattggttc
     6241 ttcgtctcat cttgcttcat taacgcagtg atattacgaa tatccgcctt tgtcaaaaat
     6301 ggcgatactt gaataaatgg atgtaacttc attcgcagtg gtactgtaga gataacaaag
     6361 tcacatgccg ttccactctg ctcatattct ttaaatgagt acacgccgac tatttcaagc
     6421 gtattctcaa actcttttcg tactttagat tccaaaagtt gcgacgtccc taaaccagaa
     6481 gcacaaacaa tcaatacttt ttgcttctca gaccctattt ccttatctaa gccatacaaa
     6541 aagtgaatag ccaaatatcc tacttccgct tcgtctacat ttgtttttaa ctcctgctca
     6601 aggacttctt tagcaaccaa ccctaattca aaagctagtg gataattagc ttttagattt
     6661 tttaaatacg ggttttgtat attcatatta aatttaattc tgttaattgc tggctttaaa
     6721 tgcaaagcga tattggaaat cattttctgg tcttgcttaa aatcataacc gtacagctct
     6781 ttaatctttt ctaacatctt atccacgatg atatattctc ggtaattatt aaagtcactt
     6841 tttctgtttt tcgaactaag gtgtagcagc agataggcag tctcactttc cgggaaacga
     6901 attccttctg aaagatctat ttcttttata ataccttgag ccgcccttaa ttccggcata
     6961 ctaaattcaa tatcctccaa atctgttgca ggtacataac aattatcttt tacacgacat
     7021 acagcaattg cgatatgaat aatcaaattt ttaactgaaa tgtccgtcat gtgaatatta
     7081 tatttcgcta tattagaaac gacaatctgc tccatcattt ccaaattaac ttctccaaaa
     7141 aaatttattt ctgtttctgt aataagcggg cttgtagatt ccactaacaa atatcttgaa
     7201 aagcaaaatc ggatagcaag ttctgcacca gtaattctaa tgccatagcc agcccgtttt
     7261 tccactttca actcattttc tttgagtttt cgtttcactt ctaaaatatc caagtttatc
     7321 gtagacttac taacaaaaag ctcttctgac aacgtctcca gctttacata gtcatttttg
     7381 agtaataaat atcgaataat ataatctgct ctatcctctg caaacatcgg tacaatattc
     7441 atattagctc ttcctatcga atcgtccaaa agagcttcac gcagcgcttt ttcatcacca
     7501 atgaccagac gatatcctac accaggaagt gattcgattc tgtttccgcc tatcatcagt
     7561 atttgattaa ttactttaat atcatttcta attgtccgag ggttaacagc taatgcctcc
     7621 cctaattctc caccgctaat aaactccatc ttcaaataaa gcatatgaac tatttgtttc
     7681 catctaggta atgataattt tgaagcactc acgcagctcc actcctcacg acaattaatt
     7741 taagctattt catcttgatt ataagcctat cacctgataa cgacaagtct tccagaaata
     7801 gtagcaagta tttcgataaa aagcaatatc gttaaaaatg cctttactcc aatcttctag
     7861 cccaaaaagt ttcacgtgaa acataaaaaa gcgaaaaccc taaaaaggat tttcgctttg
     7921 atttatttta aatctgctac atgtgcttcg agattaacac cagttcccgc agccactcga
     7981 ctagcgaatt ccggatctac ttgatagaaa ttacgtaagt tgcggatttt aatatcatca
     8041 cgtacttgtg accaatcatc gacaatgttt ttcacgagtg cagcacgttc tgcatctgaa
     8101 taacgatccc atacttcttt tgcatggcca aagttatttg gtttttctgc aatcaggcgc
     8161 ccagaaatat caccacggat ttcttgctct ggctcgataa acgctggatt ttcttttggt
     8221 tctgtatcgt aactatttgg ctcataatta atcgaacttg tttgttgttt aaacggcata
     8281 tgaccgtcac gttggttgtt cgcgacaggc gctttcggac tgttaattgg gagttgtaag
     8341 tagtttggcc ctacacgatg tctttgcgta tccgagtaag agaataaacg accttgcaat
     8401 aaacggtctt cagaaggaag cattccacgt acaagtaccc caggattaaa accaaccgat
     8461 tctgtctccg caaaaatatt atctgggttg cggtcaagcg tcattgttcc tacgtgttca
     8521 taaggaaata catcttcaaa ccaatctttt gttgcatcta atggattaaa atcaaagtta
     8581 tccaagtctt tcggatccaa cacttgcaca tataaatccc actctggata gtctccattt
     8641 tcaattgctt catacaaatc acgacttgca tggttaaatt cttttgcttg aatttgagaa
     8701 gcttgctccg tcgaaaggtt cactattccc gcttttggaa tccagcgcag ttttacataa
     8761 actgttttgc cttcttcgtt aatccatttg aacgcatgaa cactagagcc acgtatttcg
     8821 cggtaagaag ccggcgttcc ttcatcactg aataagtaca taatcatcgt cgtagcttcc
     8881 ggtgtaaggc taaagaaatc ccagtaacgg ttgccatctt gaatatttgt gcgtggatca
     8941 ggcttcaagg aatgaataac atccggaaac ttaatcgcat cacgaatgaa gaataccggc
     9001 aaattatttc cgacaaaatc ataattccct tcttctgtat aaaacttaac ggagaaaccg
     9061 cgtggatcac gtaatgtttc tggagaatgt tgcccatgaa ttactgttga aaaacgagca
     9121 aaaacctccg tttccgttcc ttcttcttgc aaaaatttag ccattgtata ttttttcatg
     9181 cttttcttag tgacaaattt cccgtgcgca ccagcaccac gagcatgtac aacccgttct
     9241 ggtactcgct ctctatcaaa atgtgccaat ttctcaataa gcacataatc ttctatcaaa
     9301 gttggtcctt tacgtcccgc tgtcatcgaa ttttggttat caccaactgg cacaccttga
     9361 ttcgtcgtta aattttttct atctgtcata tgtatatacc tccataacaa ttctatatca
     9421 ttttttattt gtaataatta ttaaatgata ctatttatat tttaaagaag gaagagacaa
     9481 acttcaacta aaaggcttaa aaaagaacag acgacctaat tcatcgtctg ttccctatta
     9541 ttgttcagct ttaactaaaa ttttcttcac ttttcgttcg aactcgcggc gggggatcat
     9601 cacactatga ccacaacctt cgcacttaat ccgaatatcc atccccatgc gtataatctt
     9661 aaatcgattg gtaccacaag gatgaggctt tttcatttcc acaatatcat ttaaatcgaa
     9721 atgctttttt tccataaaca tcacaaccta ttcatcatca aactgaatat ctaaaatctc
     9781 taaaatgcga tctaaatcat catcagataa aaattcaatt tcaattttac cttttttatc
     9841 gcgacgttta atcgagacag ccgtaccaaa tttatcacgt aattggcttt cgctttcacg
     9901 gataaagata ggaactctag ccggcttaat tgtttcacgt gaaacatttt catttagatt
     9961 attaaccaca tcttctaatt gtcgtactgt cagcccttgc gccacagctt ttttagccgt
    10021 tgggataata tttttcttaa gtttcaaacc tagtaacact cggccatgtc cagctgacaa
    10081 tgagccatca cgtaacatta cttgaacttc ttcaggtaat gtcaaaagac gaacaaagtt
    10141 agcgatatat ggtctacttt tcccaacgcg ttctgctaat tttgcttgcg ttaagcccaa
    10201 ttttttcata aggaactgat atgattccgc ttcttcaagt ggagataaat cttcgcgttg
    10261 taagttttca atgacagaaa gctccatcat ttcttcttcc gttaaatcac gtacaactgc
    10321 tgggatttct tttaatttag cttcttttgc tgcacgaaat ctacgttcac caacaacaat
    10381 ttcatatcct ttatctgtat ttcttaatat tattggctgc aaaacaccgt gaattttaat
    10441 ggagtcacgt aattcattga ttgctttcgt atcaaagatt ttacgtggtt gatatggatt
    10501 tggcttaata tcttttatag cgatattttg tacggtttct tcattcgtat ctacattatt
    10561 aaatagtgca ttgattcctt tacctagacc tttagccatg tgcaaccact tcctttgcta
    10621 attctaaata aacttcagca ccttttgatt ttgcatcata taacaaaatc ggttttccat
    10681 gactaggtgc ttcacttaga cgtacattcc gtggaataat tgtattaaat actttgtttt
    10741 ggaagtattt tttcacttct tctattactt gaatacctag atttgttcta gcatcaagca
    10801 ttgttagtaa aacaccttca atttgtaaat cctcattgag atgcttttgg acgattctta
    10861 ttgtatttag taactggctt aaaccttcta acgcgtaata ctcacattga acaggaatta
    10921 aaacagaatc tgctgctgtt aatgcgttta aagtcaaaag cccaagtgat ggcggacaat
    10981 caataatcac atagtcataa tcatcacgga ttgagtcgat tgcttttttc aatctaattt
    11041 cacgagagat agctggaact agctctactt ctgcacctgc gagttgaatt gtagctggaa
    11101 taacattcaa attatccaag tctgtttttt gcaacacatc ttgaatggct acatcgtcaa
    11161 ctagtacatc ataaatacaa tgttcaattt cacctttgtt aacaccaacg ccacttgatg
    11221 cattaccttg tgggtcaata tcaactagta acactttctt acctaaaaaa gctaggctcg
    11281 agcttaaatt caccgatgat gtcgtcttac caaccccacc tttttggttt gctagtgcaa
    11341 tcactttgct caatcttttt caccaaccct tattttgtac cgagatttcc ggttctttta
    11401 tcttctattc taccaaaaga ttttcattta gtcttacaaa aagtaaaaat aaattgaaat
    11461 tcgtattttg aaagcttaaa aatggtgaaa ataacgtttt gaaaacctag aaatgtttca
    11521 cgtgaaacat tttaaaataa aaaaagcaac caacctaagc tgattacttt tctatcttca
    11581 atctacagag aatgttgtct taacacctag aaccgtgcag actttttgat acattctaag
    11641 agtcaaatct ggatcccctg cttctaaacg cccaataata acaggagata aatctgattt
    11701 aagcgctaaa tctagttgag accatttctt ctccattcgt ttagagaaaa tatatttacc
    11761 aaggcttgct gaaaaactat ctaagtaatg agcaatgcct tcatttgcta aagctttatt
    11821 ttttagtgtt tcgaattgat agtctgcatg accaatgctt gtttccgctt caatacgacg
    11881 caagaatacg cgtttgactt cttcgcggta agcactcatt tgatccgtga acgggttttt
    11941 atctttaaaa tagcctttaa cgaaacaata ataggtttca tcgccactaa aagcagtgaa
    12001 gtaaattaaa cgacaatttt tatctttaaa atgtgctttc atctcttgaa tcggttggtc
    12061 tacagttgtt tccactcgag ttgtttgtag tgagtaagct tgacttttac cgataattaa
    12121 atggacatcg gggagaattt gcttaccagt gctaagtttt ctcgtttctg ctgtttctag
    12181 ttgtaacagg ccttgaaata ctaaagtggc cattagtggt tcttccacaa ttaaattttg
    12241 taagaaatca tacgcttgga actcattttg ttcgtctttc acaaaaatga tttttgccat
    12301 tcgtttcgtg attccactca gagttgagtg aatcactccc tcctttacaa ctttacctaa
    12361 ttctattgta cttttttctg ctcaaaattg cacttatttt ctctattttt tacaaaataa
    12421 accaaaccca ctcgaattga gttgctttcc ttttttgaaa ataaaaaacc cgcttcaata
    12481 agcaggtttt gcagctattt tttcgcttct ttcgcgattt ggtaccaact gtaaatcttc
    12541 actatcgcaa agaaagtata gccaaatgcg atgagatatg ccccgtaatt aattaataga
    12601 atgttgaagc cacttcccca accagactct tctgctacgg ctactgctcg ggcatagggg
    12661 ctagtgaaaa agtaggtaat atatagtgga ttaaaactta aaatagcact tgtaatcgct
    12721 attacgaaag atggaagtac catcaaacaa ctaatgacac caactgcatg tccaattatc
    12781 ttcaaaaacc tcactgctac acctcttatt tctttttagg aatttgaatg gtaatttgat
    12841 aaaaatcatc tgtctcttct tcggtgaaat ctaggtccat tccgttatct ttaaccattg
    12901 taaccgattg tttaatcgta ttcatagcga tacgcacgtc acgactaata gcttggcgtt
    12961 ttggtttggt ttttttagta gctactggtt ttttcacgcc caaaatttct tgaattcttg
    13021 cttcggtttg tttgacgttc cagtgatttt cagctatttc ggctaaaatt gcgacttgct
    13081 gttcttctgt ttctaatgcg agtaacgaac gagcatggcg ctctgaaatt tgtttgttaa
    13141 gaacggcttc ttggaccgtt tctggtagtt ttagaagtcg cattttgttt gcaatggcag
    13201 actggctttt cccgacacgt tgcgcaaggg cttcttgtgt cacgtcctgc atgtctagta
    13261 aactccgata cgctttcgct tcctcaattg gcgtcaattc ttcacgttgc aagttttcaa
    13321 ttaacgcaat cgctgctact tcttcatcat ctaaattttg aataattgct ggaatttttt
    13381 ccatttctaa agaaagcaca gcacgaaaac gacgctcgcc tgcaatgatt tcataataat
    13441 ccggttccat ttctctaacc acaatcggct gaataacgcc gtgaattcgg atagttcgag
    13501 caagttcatc aatcttatct tgatcgaata ctgtccgtgg ttggaattgg ttcgggaaaa
    13561 ttttatccat aggaagttct tgtacgcgtt gtactccttc ttctactata tcatccattt
    13621 gattcttctc tttttttcca aataaacgtg aaaaaggcat ctgggtcctt cctttccgga
    13681 acatctcggg gtttcttaat atattatctg gctatccgca agtctcttaa actattttag
    13741 cagaaatgct agagaaaaac acgcttattc tgtcctttaa atgtgaaaaa atagatagag
    13801 ctgctaaagt ttcacagtcc tatctatttt cttaatgaaa ttcatcggta acggtattga
    13861 tggttttttc catattgtcg cggtaagact cattttgtag caacatcatg gaaataatat
    13921 ccatcacata cataatcgaa aactggctat tagcaaaata ccttttactt acgaataaag
    13981 tattgtaaac cggaatagtg acgtcactga tttcggtcat ttcactattt tcaaaactgg
    14041 taaatgtagc aactttactt ttgtttttct tagcgatttt tagcgccgtg actagctctg
    14101 gggtgttacc tgaattggaa atgccgataa caaaatcttc ttttgttgtg atggagctag
    14161 tgataatcat catatgcgga tcgttgacac tgatgacgtt taaccccatt cgaataaggc
    14221 gctgcgacat ttcaacggca gtgagccccg aacttccgac gccgcaaata tagactcgct
    14281 tagcttcttg aatgtactgc accacttcac ggatcttcgc tggttcaatc agcttcaccg
    14341 tgttatcaat tactttatgg tagaacgaat aaacctcttc aaaaaggtca tcataaccaa
    14401 gtgacggaac cattgtcgct gcagtattca cccgcatttt caaatcaaca aaactatcac
    14461 agcgtacatg gcgacaaaat ctcgttatcg tcgaaatgga tgtgccagtt tcttcagcta
    14521 gctctttaat attaatattc ttgagttcat cacttttttc taaaatatac ttcgcaattt
    14581 gtttttcttt attcggtaat cgattgtaat tttgttggat ttcatttaaa atcgtcatct
    14641 ttttcggcct ctttctggtt taagaaatga taaagcgcac caatcatccc tgcttcattt
    14701 cccagctttg cgaaagtaat atctgctgta tcgaacatcg gtgagattaa tttggttgag
    14761 atagccgctt ttagacgcgg tttgaagaat gactcttctt ccattaatcc gccaccgagt
    14821 acaatcactt ctgggttgaa aatatagatt aagtttacta caccttctac taaattctca
    14881 atccattgct ctatttcagc cagcacatct gcatctccgc tataggccca ttccatgact
    14941 tgacgaccat ttaacgcatt ttcctcgata ttttttcgcg aggctacttg tttaatcaat
    15001 gcttttgttg aagcaacatc ttgaaatctc ccttgtgaaa ggtgcatata gcccacttca
    15061 catgctgtaa aagacgatcc atttattagt ttgtcgttta gtaacattgc tccgccgatt
    15121 ccggttccaa ttgtcaaaca gagcacgctc ccacgtcccc gtgctccacc caaccaaaac
    15181 tcgccaaggc aggctgcatt tacgtcattt tccactacgc acggaatatg aaatcggtgc
    15241 tctagttcag cttttatttc agttccagtg tatttgggaa tcgtgtagcc agcataaata
    15301 attttgcctt tcacagaatc cacaacaccc gcagaggcca cacagacgcc cgctacattc
    15361 gttttttctt gttcgacaat ccgaataagc gcgggcatga tttgattcgc tccgccagtt
    15421 ataggcgtca cacaagactt aagatcgccc acccgcttac cttcttgatt aaatttagca
    15481 tatttgatac tcgttccacc aatgtcgaca caaagataat tttccatttc ttcacctctt
    15541 tagtgaaatt attatccttc ttttgttaac tcgtcgtaaa acgcttggct tgaatttgct
    15601 tcgatcaaac gggttacctt ttcctcgtcc atgagcactt ctgcaagctc tgacaacact
    15661 tctaaatggc tttctgagtc tgttgccgca agggtaataa ctagtttcac cgggtcgaac
    15721 atgtcgcttc caaaagccac gccgtcagcc agtgttgcaa aagttaggcc accgcgaatg
    15781 acgccgaatt ctggtcgtgt gtgcgctagg gcgatatgtt tagcaatcac tatatatggt
    15841 ccattatttt ctacactttg aatcattccg tcaatataac tctctttgat agcgcctcgt
    15901 tctagtaaaa gtcttgctga tgtttggatg gcttcgcgcc agtcttttgc ttttaaattt
    15961 acctcaatat cttctaaagt aactcggtct aataacatgc tcgcgccccc ttatttatta
    16021 tattcagcca ttatttctgt taaatctacc tccgccagcg actctcgctc caaatagttc
    16081 ggggttaaat cactatgttt tgttacttca tttggaatga caagaacatt gacacccgca
    16141 ctatttcccg ccaaaaggcc atttcgcgag tcttctacga taagagcctc cgatggctta
    16201 acatccagtg ctctcaaagc ttctaaaaac aagtccggtt ccggcttgat tcgcgtaaca
    16261 tcctccgccg taataatcgc atcaaaatat ccgagtaagc ctagtcgttc caaatgatag
    16321 agtggttttg gtcgctgcga tgaggtcgca agtgctaatt ttaatccacg ttcttttaat
    16381 tcacgaataa agctttccac gccttctttg gccggtaaac ttttactgtt ttcaataaac
    16441 gttgcttgtg tttctgcttc gaagtcttgt cgattaatat ccatttgctc tgtccggttg
    16501 agttcgcgaa acaaatcgtc cacatttgac ccaacgcact gcaaaaactc ctcgatagaa
    16561 aggtcataat tctgcttcgt tttaaaccat tctttaaaaa tttcatacca aactacttct
    16621 gtatcaataa caattccgtc aaagtccatc acaatcgctt ttaacattgt cttcctccta
    16681 cccattttac tattcaaagc gctcctaaaa agaagcgctt acaaataagt taattctttt
    16741 gttctcggtc tgcaactatt ttatctatca gttcttgata ttctggtgcg ccgaggtaat
    16801 ccgttatttc tacataatac gcatctggtt gcttttcttt ggctcggtcg ataagggatt
    16861 tatgcgtcac gactacatcg cattcggtcg gcaattcgtg gatggcgata tggaacactt
    16921 taatatcctc taagccagca tttttgattt ttttctgtag tacggtcgcg cccatcgcac
    16981 tagatccaag tcccgcatca caggcataag cgattctttt aacattttta aaattaaaat
    17041 catctactgt agcttcgaaa acggaggaaa tactgctctt tttgccttta aggctttcca
    17101 ttttcttcgc tgcatcttgt agttcagagt ctttgttacc catgcgttta ataaatggaa
    17161 tggcagtaat gaatgtaaca agtgccgcac atagcaccgc aataaggatc ttaatgtgat
    17221 cgccgggtgc tgccatcatc atgattgtga taatactacc aggagaagcc acaccaacaa
    17281 gtcccgcatt tgtcattgtt aaaataaatg ttcctgtcat accaccaaga attagcggta
    17341 aaataagaat tggattcatt aaaacgaatg ggaagtaaat ttcgtgaata ccaccaaata
    17401 ggtgaataac acttgccccg taggaagatg ctttggagtt tcctttacca aagaacatat
    17461 agccaagcaa aattccaagt cctggtccag ggtttgattc tagtaagtaa agcactgatt
    17521 tccctgtttc tgcgagttgc aaggtggcta gtggacttag aataccttga ccgatcgcat
    17581 tgtttaagaa taagaccttg gccggctcaa taattaaagc cgttagtggg agcaaatgat
    17641 tattgattaa tacatccacg ccacttgcta atacttttgt tacagcttcg accattggag
    17701 caatcgccac ataagaaaat agtgctaatc ccgctccaat tatcccaatc gaaaagttgt
    17761 taactaatag ttcaaatcca gctggaattt ttccatcaat acgttcatca aattttttga
    17821 gtatccaagc tgcgagcggg cccattatca ttgcgccaat aaacatggtt atatccgaac
    17881 taataattgc tcccattgtc gcaacagtac caataactcc gcctcggtaa ccgtgaaccg
    17941 ctcgacctcc agcaaaggca ataagaagtg gtaacaagta atttagcatt ggtgcgatga
    18001 acccttttaa catctcagag cctgtagcca ccccaattgc cgttaaaata ccccaagcca
    18061 taaaagctcc caaattcgga atgaccatac cacttagctt actcccaaac ttttgtacat
    18121 gtacccgaat agacatattt ccccctccaa tcatatgtgt ggcgcaattt tatagtgata
    18181 cttctttccc ctcagcaatc gaacgttcaa tcgcatctac tactcgtaag gaatcatacg
    18241 cttcttttgg tgtaataatt gattttgtgt tattcgccac gttattaata aatgccatta
    18301 cttcctcagc taaatcgccg gaaacttcgc catttgtgta ataccagtgt cttgaatccg
    18361 gataagatac ccctttttca ctaacaaaac gaacaccgtg gtcgcaagag tctacatatg
    18421 ctacgccttt tgttccgact aattcaagtt tgtcgtcaat gatggttggc gaattttctg
    18481 gcaagaccca gcaagcttcc aggcaagcaa ttgcgccatt ttcgtacgtt acaatggcat
    18541 aaatcacatc attcatgccg tattctttaa gtaaaacact gcgacttttg gcaataactt
    18601 tgactggctc gctatccatg taccagttaa tataatcaat atcgtgaatc attacgtgca
    18661 tacttaaatc agaagcacct atgtaacgct ttggcccggt aattggactg ttacgacgac
    18721 aataaagatg aataatatca cccaattcgc cattatcgag gcgctgttta atcatattaa
    18781 aacgaggatc aaatctgagt aaaaagccaa ctgtaaacac tttgtcgtag tctttggtca
    18841 gttcatacat tgctttgccg tcttccagtt cttttgcaag tggtttttcg agtaaaatgt
    18901 gttttttgta ttttacggct tcttccacgc aatcacggtg catattatca ggtaaaacaa
    18961 tgctcacagc ttcaatctcc gtatttgcta gaagttcgtg gtagtctttg tatgctttac
    19021 actgaaattt ttctgccatt tcggcgcgtc tttcatcgtt gtactcacaa attgctacta
    19081 actctacttg cggaagcttt tggtaaattt ctgcatgata ctgccccatt tgtccaacgc
    19141 caattacgcc aactttgatt tgctttgtca tatcacttac ctctttcttc ttagattttt
    19201 ttaatttcat ttgtaaagcg ggtggttatt tcctgtggcc gagttactgc gccgccaaca
    19261 acaacggcat aacaacctaa cgtaagaact tgtcgtgctt tactaggcga atcgattttc
    19321 ccttctgcaa tcactgggcg cttcgtactt ttcaaaactt ctttcaaatg ggagaaatcg
    19381 tcgtcgctga tatttttatt cgctgtttct tcggtgtagc cgtaaagtgt cgtgccaatt
    19441 aagtcaaaac cgagggaatc agcgtaataa acgtcttcaa tactacctgt gtctgccatg
    19501 aaaagcgtgt ttggaaactc ttttcgaatg gcacttagta tgtctttgag gtcttcgtta
    19561 tgtggtcttt ttctcgttgt tgcatccatc gcaacaattt ctactcccgt ttcacatatt
    19621 tctctgactt cttctaaggt tggtgtgata aatacgtccg aatcatcgta gtcttttttg
    19681 taaataccga taatggggac gtcgatctca ctttgaattg ccctaatatc ttttgcggta
    19741 tttgctcgga taccaacagc accaccttga actgcggcca gagccatttt cgacataata
    19801 aatgcactat gaagtggttc gtcttctaaa gcttggcagg aaaccactaa cccgcctttg
    19861 attttttcca taacagaatt gcccactgat actcctcctc tatactgtgt ttcagtgtaa
    19921 agtatgcgtt ttcaaacaga ctatatcata agaaaatgat tttatcaata tcaattaaat
    19981 gaaaattatt ttcatatttt agtgtggcta gttgcggaaa ctagctttaa aaaatgacgt
    20041 tgctgttaaa aataaaaagt cctttcgttt gaaaggactt tgttagttta ttcgattggt
    20101 aatttgttgg gtgttccggg tttgcgtgga tatttgttgg gggtttcttt tgttttcgtg
    20161 atgacgtaga tattgcgctc gctttcttct actggtagga agaaagagaa gtgttcctcg
    20221 acttttccgc cgaatagttt gatggctttt tcggcagttt gcagctcttg ttcggcttgg
    20281 gctgctttca ttactaagaa cgaaccgcct tttttgacaa gtggcatgca aagctcggat
    20341 aatacgctca ttcttgctac ggcacgtgcg gttacaaggt cgtatttttc gcggtgcgct
    20401 ttgttttgac caaatgtttc agcgcgatca tgataaaaat gcacatccgt tagacctaat
    20461 ttttctgcta gcgcatcaag gaaagtcatg cgttttttca aggagtctac gatgcttact
    20521 tttagatgcg ggaagcagat tttaattggg agacttggaa aaccagcgcc agccccgaca
    20581 tcacaaatcg tatcgaactt agtaaagtct acataaaccg cggcagagat agaatcgtaa
    20641 aagtgcttta aatacacttc tttttcatca gtaatagctg ttaaattcat tttttcattc
    20701 cattctacta acatttcgaa gtaatcgtgg aattgtttta gttgcgtgtc gcttaattct
    20761 attccttttt cagcaagtgc tgtttggaat tgctctggat tcatattttt tcctcacttt
    20821 attttcgcga tttttgccgt gtttaggatg gtagacgggt ttggtttata cttttaaaca
    20881 ggcttgtacc atatatttta gctcattatt ttcaagtata agtattttcg ttctttttag
    20941 caagttcgta ttacgtttaa caattatcaa acttgttggc attctcttta aaactttttt
    21001 tggcttgatt tacccatttt ccttctgctg tggtggaaag tccatctatg taaccctgac
    21061 aattgctttt tatatctgct attttgtccc gtttgatcat tttgaacatt cgtttgcgat
    21121 tttctgatgt tgcatgagtt tggctcgcca caaacatccc aataagattt ttttctagat
    21181 ttctgcgtga ctctaataat tctgctttta gtttatctat catgttatag atcacgatcc
    21241 ttttttagct gatgtagttc ttcttcataa gaattcactt gtttcttata aagtgcttga
    21301 tgctcttcgt gttcattttc tagctttgtt agtgtgtttt ttactttcca atcgccttct
    21361 tcttggatag aactgattaa atggtaggct ttttgcaagt cttcagatgc ttcgtaatct
    21421 cttttttgat ggatatacct gatttgttca gaaaggtttt ctagttcttg gtgaaaccgc
    21481 catttttctt gagatgcgtc gtccatcgct tcgtccaatt gtcgtctttt tctattaaaa
    21541 tcattatcta aattttctag ttttagcagt agttgtcttt gtttatccat acatgctccc
    21601 tatttgtttg gctaattctt ggtcggtttt tagctggctt tttattgctt cgttgattcg
    21661 ttctagcaat ttatcatact cttgttctat tttggttgct tcgactaagg atttttcgca
    21721 atcttgcact gtgtctatca caatttccgg ctcagtcgcc ccgccccaag caagtgcggc
    21781 gagtatttct gactcatata gattggagcc gatatccctt gcatctgaaa gcgtatcgcg
    21841 ccacaactct tcagcattct cgatttcttt atcaaaaaca tcttttaaag ctctaatttc
    21901 gccttgaatc gtttgtttca tcccttgcgt aattgctagt gcttccgctg catccaagaa
    21961 tatttcttcg gatgaggata ggccaccacc gctttttgta aaactggttc gcatgatgtt
    22021 gatagctgct aattgttgcg ctgttacgta tttagctaat tgaaggctgc cttctttatt
    22081 tgttaggatg tttccttctt tgtcaaactg ataaccaccc cacatatgtt gctcaaccat
    22141 accagctttt ttcgactcaa cctctattaa atggccaatt gtcgggtctc cgataccata
    22201 accaattggc acataatcct tcctatcaat aaaattaaat aatctatcta aagcgtttat
    22261 tgcttttacg gtatcttgtt gttttggcgt taggttggag tagatattcg ggccttggta
    22321 gaagaaaccg ccgctgatgc gtttgatgtc ttttttatct aagtctgcga tagcgtactg
    22381 ggcgttcatg gagcctagag aatgaccgta tacatagatt tgggcgtttg ggtagagttt
    22441 catggtttgt tttaaggttt ctgcggaggt ttttagttgg ggtgttactg tggatcctcc
    22501 gccatttgtg atttggattg cggttggaat atcattactt aaccagtcct tcctcacatc
    22561 tttataatct ggatgttttg gaacattaaa gtttccatta gccggtgcgg tagaaccttt
    22621 gtaaaggatt gttagttctt ttactttgtt tctttcgctg atggaggcta tgggtggcgt
    22681 gtatttgtct gtgatgatgt aggattgttc cccggttgat ttgttgttga ttttttggga
    22741 tacgattccg atggtattcg ttcctccatt gacttttgag atagttacat cttctgtaag
    22801 gtataaatta tcatactctt ttcgcgccag tctcattctt tcgtaatcat tattaggtag
    22861 actcatgagt tctccttcca acgacctaac agcttggaaa gttttccagc tatacttgcg
    22921 cttccacact ctaatttgcc attaaattta tccaaagtat attttatata caattctgga
    22981 ttttcattta tgattactgt aacattaata cctcccatag gattgtgatt aatgcttttt
    23041 tcatcaattt catatgattg aattacgcct tctttagtca atgcttttgt atctaaatcc
    23101 tttaagcctt tgtaaaaagc atttttcgct tcatcactat aaaccacttt tatcatttct
    23161 ttatttaatt tctcttcgtc catatagaat ttcaccccta aaccaaaaat ggttattact
    23221 gtaattgcta atattattat ccatctcttt ttcaactctt cacctctgtt gtatgacttt
    23281 ttatttgtag gtctatttta tcacatgtta gaaattttca ctttcttttt tttcagtctt
    23341 ttaatcgcct ctcagctcta taaaaattca tttataaccg ttcaaaagcc ccaattgttt
    23401 tgtaagctcc ttagatatgc ttgctccacc actctttaat tcttcattat ttttttcaac
    23461 gtgtatgtta atttcaaagc aggatccttg ttaataacta atgcaactat tattccgccc
    23521 attggattag gctctatact ttccttgtca acttcatatg attgaattag cccttctttt
    23581 gtaaatgctt tcgtatcaat aagttttata tcatcattga atacttcttt tgcttcattg
    23641 ctacaaacca cattcatcat ttctgtattt aatttctctt catccatata aaattttatc
    23701 cctagaccaa aaataatcat tattgcaatt ccaaatagta ttatccatct ctttttcaca
    23761 cattcacctc tgtttttatt ttcttagttg tctaataatt ttcctaattt tgcagaattt
    23821 ccgccaccat catcaattag ttttttgtca tcagctttat tcaatgtaaa aaaaacatat
    23881 aactcagaat ctccattaac gtgcaaagta acattgattc ctcccatagg gttttgtttg
    23941 atacttttct tatcaatttc atatgtgtta attacaccct tcccagtcaa tgctttagca
    24001 tccaaatttt tcaacccatt ttcaaaaact cttttcgctt catcactata tactacattt
    24061 atcatttctt tatttaattt ctcttcatcc atataaaatt tcacgcctaa tcccgcaaca
    24121 atcattacta caactaccat tgctataaac cacctctttt tcacacattc acctctgcag
    24181 tatgtcttct tctatgtaat cccaatctac cttaattaaa aacaagaaaa aaccacatta
    24241 ttcagcggaa actttcaact taaacggtaa gtttgaagtt ttcgtgaaca tgtggtttca
    24301 gtaattatag taatccgtgt tcttatttac ttattttagc tatctttcct tgctcaatat
    24361 aaactaacaa aatagatata tcggctgggt ttactccgct gatacggctc gcttgggcga
    24421 tggaaagggg ttcgattttc tttaattttt ctagggcttc tgttgctagg ccgctgattg
    24481 catcataatc gatgttttct gggattttct tgtcttccat gcgtttcatt ttttctactt
    24541 gaaggttgga tttttggatg tagccttcgt atttaatttg aatttctact tgttcagcga
    24601 tttcgtcggt cacaaatgtt tcacgtgaaa caatttgggc gatcttgtcg taagttattt
    24661 cgggtcggcg aagtaaatct gctgctagaa ttccgtcttt tagctcgcct gagccgattt
    24721 cttttagcat tgcttggact tcagcagttg gtttaatgcg tgttttttgt agtctttctt
    24781 tttctgcttc gatggcactt tgttttgcta aaaagcgttc ataacgttcg tcgctaatta
    24841 agccgatttc atgaccgatt tctgttaaac gtaaatctgc attatcatgg cgtaatagca
    24901 aacggtattc ggcacgagat gtaagtaaac gatatggttc ttcagttcct tttgttacta
    24961 aatcgtcaat taaaacgccg atataagctt ggtcacgacc aaggataact ggttcttttt
    25021 caaagacttt acgtgcggca ttgattcctg ccattaatcc ttgtcctgct gcttcttcgt
    25081 aaccacttgt accattaatt tggccggctg tgaaaagtcc ttcgactaat ttagtttcaa
    25141 gtgatggcca cagttggtct ggcataactg catcatattc gatagcgtag ccaacacgca
    25201 tcatttctac attttcaagt cccggaatag ttcttaacat ttcacgttgc acttcttctg
    25261 gcaaactggt ggaaagacct tggacatata cttcttcggt atttttgcct tctggttcaa
    25321 ggaagatttg gtgtcttggt ttgtcgctga aacgaacaat tttatcttca atggatgggc
    25381 aatatcttgc gccagtgcct ttcttcgttg ctgtaaacat tggtgaacgg tgtaagttcg
    25441 cttggattat ttcgtgggtt gtttcgttgg tataagttaa ccaacacggt agttggtcaa
    25501 gcaacatttc caccgtatca aagctaaatg cccgcggatg atcgtcaccc ggttgttctt
    25561 ctgtttttga atagtcaatc gtacttgatt ttacgcgcgg tggtgttcct gttttaaagc
    25621 gacgcagttc aaaacctagt tcttccaggt gttctgaaag tttcacagaa ggttgttggt
    25681 tgtttggacc gctggaatag cgcagttcac caacaataat ttcgccacgt gagaaagttc
    25741 cagtagtaat aacgactgtt ttcgcgtagt aaatcgcgcc actgtttgta ataacgcctt
    25801 tacacacgcc atcttcaatc actaaacggt caacaagtcc ttggcgcaaa gtgatatttt
    25861 cttctttttc aattgtgtgt ttcatttcgt gttggtaatc ccatttgtct gcttgagcac
    25921 gtaatgcgcg aacagcggga cctttacctg tatttagcat ccgcatttgg atatacgttt
    25981 tatccgtgtt gcggcccatt tcgccaccaa gagcatcaat ttcgcgcaca accacgcctt
    26041 ttgctggacc tccaacagaa ggattacatg gcataaaagc gaccatatct aaatttatcg
    26101 ttaacatcag tgtttttgcg cccattcgac cactggcaag acctgcttct acacccgcat
    26161 ggcctgcacc aacaacgatg acgtcaaaag ttcctgcatc ataggtttgc attttataaa
    26221 aacatctcct aaaaaatcat tttccaaggc aaaattgatt gaacaactga tcgagtaatt
    26281 catcctggac agaatcacca gtaatttcac ctagtaaatc ccatgcacga gtcatatcaa
    26341 tctggacaat atccactggc ataccgagct gaatccctgt tgtaacgcca tttaaagctt
    26401 caagtgcttg gtgaaggagc gcaatgtgtc gaacgttcga tacatatgtt gcatcacccg
    26461 catcaatgtc acccgcaaaa aacagtgttt taatcgcttc ttctaaagcc tctaaacctt
    26521 catcgtttac tagagaagtg gaaacaatcg ggttttctcc agcaagttca cgcactctat
    26581 ctatatcaag ctttgtttcc aaatctgttt tatttaaaac gaccacataa ttatgacccg
    26641 cggctgcttc aaataacgct tcatcttcca ctgtcagctc ttcgttttga tttaatacta
    26701 gcaggataaa atcggcatcc gccaaggctt ttcttgaacg ttctacacca attttttcca
    26761 caatatcttc tgtctcacga attccagctg tatcgattaa acgcagcgga acaccacgaa
    26821 cattgacgta ttcttctata atatctcgcg tcgtccccgc aatatctgtg acaatcgctt
    26881 tttcttcttg aattagttgg ttaagcaagg acgatttccc aacatttggt cgaccgataa
    26941 tggctgttgc caatccttcg cggagaattt tcccttggct tgctgtttgt aaaagttgct
    27001 cgacggaagc gcgaactagc tcggttttct cgagtagcat tcgctgagtc atttcctcca
    27061 catcatcata ctccggatag tcgatattta cttcgacttg cgctagtgca tccaaaattt
    27121 cttgacgtaa attgcgaatc aaccgtgaaa gatttccgtc catttgccga attgccacgc
    27181 ccatcgcccg gtctgtcttg gcgcgaatta agtccatcac agcctccgct tgcgacaaat
    27241 caattcttcc atttaaaaat gcgcgctttg tgaattcgcc tggttcagct aaattagccc
    27301 catttcgaag taacagttgc aacacgcggt tcacggaaac aattccgccg tgcgcgttga
    27361 tttctaccac atcttcccgt gtaaaagtac gcggcgcacg cataactgtg accattactt
    27421 cctcaatcac ttcgccgtct tcttttatat gaccgtagtg aatggtgtga ctttctgctt
    27481 cacttaagct atttttggca taaaaaatac gatccgctat ctgaatcgcc tctggaccgc
    27541 ttaatctaat aatagcaatg gccccttctc ccggcggtgt tgagattgca gcaatagtat
    27601 caaattccat tctttactca tcctttctca ttagaatttc agctcaaata agccttatcc
    27661 tattttgaat aaattttggc acatgatttt gtgcattttc aacaacttac gctccgcttt
    27721 gaccaaagca attaaattgt tagtattttg aaggttatcc atagacttat taacatatcc
    27781 acagaaaaac cattaataaa aattcatcca taccatttta acttatccac atgtgaataa
    27841 caatagtttt atccttacta gttaagaaaa cttaaatttt ctagttaaag ctttaactta
    27901 tccttccact tccttggctt taactcaatt ctttttatct atactaaagt taaaaggagg
    27961 agaaaaaatg aaaatacata aactaacttg ggtgctatta atggggctac tactgctctc
    28021 atcctgttcc acaaagcaac caaacctata tttgtcagca aatgccgccg cggtttattc
    28081 agtcgaaaat ggtgaaccgt tatatgaaga aaacgctgat aaagtaatgc cgattgccag
    28141 tttgaccaaa ttaatgacag cttttttagt tttagaggct gtggataaca atgaattatc
    28201 gtgggatgaa aagcttgatc ttgttcgatt ggatgatcct tccgcggttt ccctttacgc
    28261 gattacacaa aagagaacat ggtccgtcag agatttatac agcgcgatgc tcactatgtc
    28321 tgcaaatgat gccgcggaaa cactgggaga tcgtttagac ggagctaatt ttcccaaaga
    28381 aatgaataac caggctaaaa aattaggtat gtcgagtaag actacatttg tcagtgctag
    28441 cggacttgat gttgacggaa aatccgctgt ttctaccaca aaggatttat ttttgctatc
    28501 atctaaatta atttccactc atcctgaagt gttagagaca acatccaaat ctagtgtcac
    28561 cactgacaaa ggcgccaaac ttgaatccac caatgactca ctcggttcga ttcaaggctt
    28621 agatggactg aaaactggat ttacagatga agcaggctat tgctttattg gaacagctga
    28681 acgtggagga aaacgtgtga tttcgattgt cctagatgcg ggaactgcgg aaaaacgatt
    28741 taaagataca gagaagctga tggaggttgg atttaaagaa aattaacgaa tgaaaagaac
    28801 ctctctttcg ctgagaagtt cttttttaaa tagttcagca tcaactcttt aaagcgcata
    28861 gatacttttc catgtataca tctttatttt tagaattata ttgcataata aagcgtggat
    28921 gttccaaagg tatgattgta tcaaaaaaat gatgctcctc atttattttc gataaaaaat
    28981 taaaattctc gccgctgcca atgcagtaac agaccgaagt atctatcccg caatctattt
    29041 ggttttgaag tgattctaaa ataattggct tcagcgcctc ttgtagtttc ttattctcat
    29101 aatagttgca attaacctca ttgccttttg cattcatacg aacaatacca agcgggcaga
    29161 caaaattcat ataaaaatca gtataaaatg cctcacaacc gccgtattct gtcataacat
    29221 catataaaaa atctgaggaa gactggttta tataaaattt atcaataaaa ataccggttt
    29281 cgttttgaag gtgttttgcg tcttcaaaag gaacgcctgt cacagcagaa cctctccgcg
    29341 cgggagaact tccaagtatt atccggcgca gtttagtatc attatagtat ttctgataaa
    29401 atgtggtcgt tattttttgc actagttcgc tttgatcacc agaatatggg ttaacggtgc
    29461 gatacccctc cggcaaatca aacgaactat tcgcaagcgc ctcattaaac tgcaatattc
    29521 gtttagcaat agttgtattt tcagtcatgt aaattagccc tctctttatt tttatttcac
    29581 aatatgccaa acatcctcaa ataactccgc ataacccgct tgctcccacc tgcttgcaaa
    29641 ataaggatta tgaaaataag tgaacgccgt aataatcgcg tttccttggt tcgttcgacc
    29701 gctcacttct tcggcttttt gtgctaaatg ggctacgtgg tttttcacta attcttcatt
    29761 ttgttcaata taatccgtat aaagtaaaaa catttttcgg tcggttttgt atcgtttttt
    29821 cttagtatcg gccaagagcc aaagccagtc gtgaagcgca tcatctggtg tttgccctgc
    29881 ttcctgtgtc caatcgaaaa tctcccgcga agtttcctct aaccaacgta gcgccaattt
    29941 ttgaaataaa tcctctttat ttcgataatg cttataaagt gccgcatgtg tgacgttcaa
    30001 attacccgca atatcataca gcgtcgtttt ttccatgcct ttttcgtaaa tgattttctc
    30061 tgccatattt aaaataattt cttgtgatag tctcgccatt ttaacccctc gattcaactc
    30121 attctttgct ttttattata caggaaaaca gaaaagttac aaatccttga caaagtaact
    30181 aaaaggagta tacttccaac tataaagtta ctaaaattaa aaaaagtaac cattttgaat
    30241 ttaaaggagc gaatagatta tgacaaataa acgtgttgca tttattttag ggggttctgg
    30301 cggtattggt aaggcagtcg tccaaaaatt ggtcgaacaa aattttgcag ttgtggttca
    30361 ttattcgggt aataaggcta aagccgaggc gcttgttgaa aacattgtga agtctggtgg
    30421 agaagcgatt agtgttggcg gcgatgttgc tgacgaggcg cagatgactc gtgcatttga
    30481 tttcattgaa agccagtttg gtggaattga tgttgtcgtt aacacggcag gtattatgaa
    30541 attaagtccg attgctactt tggatatgga tgaatttgac ctgattcagc gaaccaatgt
    30601 ccggggcact tttgtcgttt ccaagcaagc tgccctcaga gttcgagatg gcggcgcgat
    30661 tatcaatttc tctacttcgg taacgcgaac cagttttccg acttacgggg cctacgttgc
    30721 tagtaaggcc ggggttgagt cgctcacatt gattctggca cgcgaacttc gtgggaaaga
    30781 tataaccgtt aatgcagtag cacctggccc gaccgccact ccgttatttt tgactggaaa
    30841 agacgataaa acaattgaca acttagcaaa agccacacct ttagaacgcc taggacaacc
    30901 tgaagatatc gcagaaaccg tagcattttt agccggacct gcacgctggg tgaatggtca
    30961 agtcattttc accaatggag gattagctta attaaaaaag gaggaaaaca gagctatctg
    31021 gttttcctcc ttttatttta ttggtctttt ttaatcgcta aaacaatcaa tcccgatgct
    31081 aataaagtta acgccaagaa cagaaaagcc gattgataag agttagtcgc gtttaccaaa
    31141 tcccctataa tcatcggtgc aaaaaagcca cctaaaactc ctcccgagtt tatagccgcg
    31201 tattttgttg caatgtggct ctgctgaaac aacttgtgcg gcaatcccat tagcgttgta
    31261 aaggccatga ttaggaatat attacataaa cacaagcaaa taaccgatag cgctaattgt
    31321 tcaaataaat acaccccgta taccgcgaac gccccaagca cacaaaatgc gaaaataata
    31381 atcggctctt ttcctttgaa aaaacgacta atgaaatagc caccgacaac tcctgcaatt
    31441 aaaatacaaa ggccagctaa agaactaata tagctcactt cgctaataga aatccctcta
    31501 acctcattca aataagaagc aagccaactt gttaaaccgt agttcgctgc atttataaaa
    31561 agcgctgata gcaaaagaat ccaaagctgt ttatctttca aaagttctga gaaaggtact
    31621 ttgatttttt ctttttgagc atttagatct attttcggcg ctttaggtac gacaattaaa
    31681 atcagaaagc caatcaaaat caccgcaata ccaatccagt aatatgtatt gcgccaaccc
    31741 actgatagca acagttgcgc gattaacaat ggcccaataa atgccgcaaa accagaggaa
    31801 gcaagcattg cggactgagc aaaacctcgc ttgttcaacg gaatatgaag tgaaatataa
    31861 ttgctgacag acgggggata acctgcgtgt ccaagcgctc cggataagaa acgaataaca
    31921 accaaaaata acaaggaata gccaaagcca aaaataacaa gaaatagccc gacaataata
    31981 attgataccg caagaactgg tcgtgcgcca atccgattgt ttaaataccc cattggaatt
    32041 tgaaaaagtg tgtaaccaag aaagaaggca cttaaaatca accccttttg acttggatca
    32101 aatcctaaat cctgagaaac agtcacaagc gaaattccaa tagtatattt atccacgtat
    32161 acactggtgt agcctataaa tagaacaagt aacaccatta acgaatgctt ttctcctttt
    32221 acctgattca tttgaattca ctccactctt ctatagtccc gccaattgca aaagagcata
    32281 accagattct ttttctgact atgctctttt caaagctatt atccattcaa tttataataa
    32341 tctaaaacca cgtccgcaac cgatttggca gcaactaaca acgcatcttc atctatatca
    32401 aattttggat gatgattaaa ataagcattc gaagtatttt tcggtttcgc gccaatatag
    32461 aagaagactc caggaatttt ttgtaaataa taagcaaaat cctctgatcc ggaaagcatg
    32521 tcgtattcag aaatgcccgt taagtactcg ccaacacctt tttgcaaact tgcaactact
    32581 tgttctgtta cagctggatc gttgtaaagt ggtgggtagt cgttcgtgta cgttagttcc
    32641 accgttacac caaacatcgc ttccatacca gcaacaatac ggtggatttc tgcatccatt
    32701 ttatcacggt tttcagtatt catataacgc acatcgcctt ctagctccac tgcatcttta
    32761 ataacgttaa aactaccttt accatcgaaa gaaccaatcg ttataacgcc cgtatcaaat
    32821 gggttcaaac ggcggctcac tactgtttga atggccgtca caaaataagc acccgcgaca
    32881 atcgcatcat tcgccatatg tggagacgaa ccatgcccgc caacaccttg aattttaagt
    32941 ttaaaataag tgcgaccagc catcgcgaag ccactatgat aataaacttg gccgctttca
    33001 ccaaatggaa atacgtgaat accaaaaatt tgatccacat catctaaaat accagattcg
    33061 acaacgcttt tcgctccgcc gggtggtgtt tcttcggcat gttgatgaac aatttttatc
    33121 gttccaggga tgttttcttt tagttggatt aaacaatctg ccaaaacgag taaataagca
    33181 gtatgtccgt catgaccaca tgcatgcatt acgccaggtt ttttagattt aaatggtaat
    33241 tccgtttgtt cttcgatggg aagagcatca aaatcggcac gtaaagcaat cgttttcccc
    33301 ggtttcccgc ctttaatcgt tacaacaacc gcatgaccat ttcccacttc ggttgccatt
    33361 tccacgtctt ttcctttata aaaatcttgg atgaactttg cggtttctgc ttcatggaac
    33421 gataattcag gatgttcgtg caaatgacgt ctaatctgag tgatttcatc ttttcgttcc
    33481 tgaagcatat tcattaactt ggtacgcatg ataaatccaa cctcctattc ttttgcggct
    33541 tttaattcga gcgctttttt cgcagacggt gttgttatag caacggaaat aagtgacacg
    33601 acacaaaaac cgacgttagt taaaagcccc accattgcgg ctaaatcaat atttccagaa
    33661 agtgcaatca caccataaat cgtagcagaa attgccacac cgaatgagcc acctaacgaa
    33721 cttgccattt tgtaaatacc agatgctact ccgactttat cttctggagc attagagata
    33781 gctgtatctg tggaaggagt tgcatacata ccaagtccaa tcccgaataa agcaaaaccg
    33841 ataaacacaa gcactgtata aagggttccc ggaataaacg tcagcgccat taaagcaata
    33901 ccaacagccg taataccaga gcctagaatc attggtttac gcgcgccaac acgttgaaga
    33961 attttttcac caatacgaat cattccaagc acacagacaa ggtaaccgat agaaagtaaa
    34021 ccggattgga atgctgtaaa accgcgacca atttgcacat aagtatttgc aacaactagt
    34081 gttccagcag ctgcatttaa caagaagttg gaaagtgtcg caccagtata agctttattt
    34141 ttaaataacg agaaatcaat aaatccgttc gcttgtcgta attccacccg gaaaaataat
    34201 cccgcagaaa taaggaaaac aacgagcatt gtaatagtaa ttgggcttgt ccagccaaat
    34261 gtggaaccac gagtgataat aagatttaag caaaccattg cgataacaaa aagaacaaga
    34321 ccaaatgaat caaattttgc ttttgtattt tgaacgactt tactttctgg agtaccttta
    34381 ataagtagca ttccaagcag tgcgaatacg atggaaataa tgaaaatcca gcgccagccc
    34441 atgtatgttg cgatagctcc acctgcgaat gaacaaatac ctgatccacc ccatgagcca
    34501 atcgaccagt aactaagcgc tctttgtcta tcagcccctt caaaataagt tttcattagg
    34561 gcaagggttg ctggcataat acaagcagct gaaagccctt gaataatacg gccgataata
    34621 agtaacgtcg ccccttgagt gacaacaagt aacagtgaac cgatgatact aagaataagt
    34681 ccgatataag ttaatttcac gcgaccaaat ttgtcagcca taccacctgc tacaacgata
    34741 aaaatacctg aaaatagcgc ggttaaactg atggcaatac taagtaaatc agaggaaatt
    34801 ccaaggtcag attgcacggc cggaacgata ttcaccattg attgggcgaa aagccaaaac
    34861 gtgataaccc cgaaaacaat cccaacaata agtttatttg tacctttata cgctgttgaa
    34921 gtcattagtt attctctcct tttaagtaat ctacaacaca agctcccatg gcttttgatg
    34981 caattaataa tgaatcttca ttgatgtcaa attttggatg atgatgcgga taaaaatgcc
    35041 catctgccgg catcgctccc acatagaaaa atgagctcgg acgttctttt gcataataag
    35101 caaagtcttc tgatggtggt tgcggttcac agcgcacaac atctgtaatt tctggaattt
    35161 tcgccccttt aatagattta acaacaaaat cagtcaaagc ttcgtcatta tttaaaacag
    35221 gataatcatt tttgtaatca agttcacaag taacgccaaa cattgcctct attccgctaa
    35281 cgatacgggt aatttctttt tgaataatgt tgcgtgcctc ttcagacata gagcgcacat
    35341 cgccttcaag ctcaaccgca tccttgatga cattaaaact accttttcca tcaaaagaac
    35401 caatcgtaat tgagccgaca tcaaatgggt ttaaacggcg actaatcacc gtttgaacag
    35461 ctactacaaa ttcacttgct gcaacaatag catcattcgc taaatgcgga gatgagccat
    35521 gtccaccttg accttgtacc ttaagtttaa aataagagcg accagtttga attgcaccct
    35581 cacggtagaa aacttcaccc gttttcatcg tagacatcac atgaatccca aggacattat
    35641 caacaccatc cagcgccccg tcttgaatca tttgaatcgc gccaccagga ggagtttctt
    35701 ccgcatgctg atgtaaaata actattttcc cggttaattc ttgtttcatt tcaataagtg
    35761 tttcgcccaa aataagcatg taagctgtat gtccatcgtg accacaagcg tgcattacac
    35821 cagggttttt agatgcaaaa gctagaccag tttcttccgt tatcggcagt gcatcaaaat
    35881 ctgcacgaat cgcaagtgtc ttgcccggct tgcctgtatc aatcgttact acaacgccat
    35941 tcccaccaac atgcgtccgc acatcgcagt ccatttcttt ataaaaatcc gcaatatact
    36001 tcgccgtatt ttcctcttga aaagaaagtt cagggtgttc atgtaagtaa cgacgaattt
    36061 ctatcatgcg atctcgtttt tcgtctagtt tttgaaataa cttctctttc attgtccaaa
    36121 cctccatttt taatacttcc gctggccaga acttccgtat tttcactaca acttaattat
    36181 aaaaaaaacc aagcgaaaag aagtttactt ttttgcttag ttttagcttg aaattttctt
    36241 cttttgtaaa ttactcaaac caatgtcaaa aatccggtgc tgaagtcaca aaaaaagctc
    36301 aactgctaga gttgaacttt ttaaaccgta cttctaaact cataaaaatg aatcgcatta
    36361 atatctaaat aagcataaaa cgaccaatct tccgtaatcg tttcatcact caccgtaagt
    36421 gtaggctgag aggcatccac aatatagtcc aaaatctctt tatctagccc atacttactg
    36481 ttcagttgcc aatacttcga ataaagtgcc ccattgtcac ggtcgaattg ccatttacag
    36541 acttgataat cacccgcgta aagccctgta agtctaatat gcacttcttt ttgttcttcc
    36601 ttaatgaacc tttcctccac agaataacgc ggattaatcg tcgcacagtt catcaaaata
    36661 agctgataac cgtctgcgtg cttcgtcata atataatctt cacccttagc aaccacaaca
    36721 cccttaagcc ttctcaaaaa cttcactgca taaaacgccg gtcgtttacc attgaaaaag
    36781 tggaacattt caattccgtc aagactaata tttaatttgc tatcgtcccc ttcatgaagt
    36841 tccgtattaa tccaaaagcc taatgcgtct acttctggta ccaaatctag catcgttttc
    36901 aaaactaatg ctcctctgaa aaaagtcccg tttgtgtatc tcgtattccc agataacgtg
    36961 ttccagttta ctaacattag cggcttattg atatgatgat gtttcaagaa agcctttaat
    37021 tgaagcgttt ttgacaaaca ataatcctct gaaatcgaaa acgacttcat atcctctttc
    37081 gaaaaatcta ccgcttcatt ttgattcgca ttataggcga caaagtccat tttatccgct
    37141 tcttctaaaa accacgtatg tcgttcaggc actgcatttt tagacaatga aaatgggaca
    37201 aaatttccga cttggatagc tggaaaacgc gattttatag tgtgatatat tttcaaataa
    37261 agttttttca gttcttcctt atcagcatat gtatttttcg gttcaaaaaa cataaaatgc
    37321 cattttgaaa caaattcccg cccaaaaacc tgcatacaat gctttaaaaa gtgatccaat
    37381 cgttcaaaaa cagccgcctc atcgcctaca atatcttgat actccaagcg aataaacaat
    37441 tgtaaatttt gctgttttaa aaaagtgagc gctaaatccg cattcgcata tggagaagaa
    37501 gttggcacta attcgtccgt ttccgtttca ggcaagaacg tcgaacctct aaacaaatga
    37561 cgaataccaa tataattaat cccaatctca tcacgcgtcg taataatctg cttttggaca
    37621 ttatctttaa gcacttcttt aagctcacca atcgtcaaaa tattcatatt ctcacttaaa
    37681 caacgttcgg tcttttccgt gatatcaatt ttctttttct caaatggtgc tttatttaat
    37741 tccttacccg gctccacatc atgataaagt cgtgacaatt tcactaaaat ttccggagat
    37801 ggcacaattt gttctatact agcgcccagc tcagatgtct tattgtctat taacaaattc
    37861 gtttccacat gatgttccgc tcggtattca cttggcgtta gctcaaaatg aaacttaaat
    37921 acttctgaaa aatgcttttg gctcgaaaaa ccatttttta acgcaatctc tgtaatactt
    37981 tccgccgaat gtagtaaatc ttgaatcgca tgcttcaatc ggacttctgt caaatactgt
    38041 aaaaaaccaa gccccgtcgt ctttttaaaa taacgtgata agtacgcctc acttaaaaac
    38101 tctttttgcg caaactcacg aagcgacaag gcttcatcaa accgctcttc cacttctcga
    38161 ataatgcgcg aaatccgttt atcattgact tctttcctag cagaagatgg aattcctttt
    38221 ttcaaaaaac gcgtaagtaa taataaaatt tggaacaacg ccgattgcgc ttctaattta
    38281 ttcgctcgtt tcttcgtcgc cgaagcaatc aaaagctcac tcaccgactt cctcaaagac
    38341 ccaacaaccc gctctctccc cgggtcactc tccttcgaga aaaatttaaa agaatgctga
    38401 aaataatcct cataataatg cgcaaaaaat gtatctgaaa tcgttaaatt aataaataaa
    38461 ttatcttcat ttccctcaat tgtataaaag gtattgcgat caagaactaa aacatcgcct
    38521 tcctgcaagt aaaatttttg ctcagaaacc ttgattgtta tttgtccaga aatagcaaat
    38581 accaatttag ttccaagtga tatttccgac gtcagctgct ttatatgttg aataccaatc
    38641 gtataatctt ttaaatgaga cactcgattc accccttcgt ttaacttaat cggacacttt
    38701 tatattatca tagtcgtgaa aattaatcgc tatcagtttt tatgattgtt ttagtcatta
    38761 aaccgacaca atcgagtcac atatatccgg aatttttgta cttttgcgag acaaaatgat
    38821 aaataaaacg gcgtataata aatgattgta gaaaacgaat aaggagtgcg ccaaattgaa
    38881 aacttctaaa ataataatag cttcattagt tagtttaacc ctggtttcaa acccaatttt
    38941 aacattcgca gcaacgaatg atgtgattga taatacaaca gaaatcacta ctgataaaga
    39001 aacaagccca actcaaccaa ctattaaaaa cacactcaaa gctggtcaaa cacaaagttt
    39061 taacgactgg tttcctgatg acaattttgc ttcagaggta gcagcagcat ttgaaatgca
    39121 agcaactgac actatcagcg aagaacaact tgctactcta acaagcctag attgccacaa
    39181 ttcttccata gccgatatga ctggtattga aaaattaact ggtttaacaa aattaatttg
    39241 cacgtataat aacattacta ctcttgatct tagccaaaac actaatttaa cttatctggc
    39301 atgtgattca aataaactta caaaccttga tgtaaccccg cttacaaaat taacctactt
    39361 aaattgcgac acgaacaaac tcacaaagat agatgtaagt caaaatccat tgttaactta
    39421 tttaaactgc gcacgcaaca ccttaaccga aatagatgtc agccacaata cacaattaac
    39481 tgagctagac tgccatttaa ataaaaaaat caccaaatta gatgtgacac cacaaactca
    39541 attaacaacc ttagactgta gctttaataa aataactgca ttagatgtaa gtcaaaataa
    39601 attactgaac cgtctaaact gcgacactaa taatataact aaactggacc tcaaccaaaa
    39661 tattcagcta actttcctag attgctccag taacaaatta accgaaatag atgtaacccc
    39721 gcttacacag ttaacatatt ttgattgtag cgtaaatcct ttaactgaat tagatgtgtc
    39781 tacgctttca aaattaacta cactacactg tatacaaaca gatttattag aaatagacct
    39841 aacacacaac acacaattaa tatattttca agctgaagga tgtagaaaaa taaaagagct
    39901 tgatgtcacg cataatacac aattatattt attagactgc caagccgctg gtataacaga
    39961 attggatctt tcacaaaacc ccaaattagt ctatttgtat ttaaataata ctgaactaac
    40021 gaaattagac gtttctcata acacaaagct gaaaagtttg tcttgcgtaa atgctcacat
    40081 ccaagacttc tcttctgtag gtaaaattcc tgtccttaac aataacttgg atgctgaagg
    40141 gcaaacaatc acgatgccta aagaaacttt aacaaacaac agtttaacca ttgcagttag
    40201 tcctgattta ttagatcagt ttggaaatcc gatgaatatt gaaccgggag acggcggtgt
    40261 atacgatcaa gcaacaaata caataacttg ggaaaatctc agcacagaca atccagccgt
    40321 aacctatact ttcacttccg aaaacggagc tatagtagga accgtaacaa ctccatttga
    40381 agcccctcaa cccatcaaag gagaagacgt aacagttcat tatcttgatg acaaaggaga
    40441 aaaattggcg gctgatgaag ttttaagcgg taatttggac gatccttata cttctagcgc
    40501 gaaagacatc ccagattata cattaacgac tactccagat aacgccactg gaacattcac
    40561 tactactagc cagtccgtaa cgtacgtgta cactaaaaac atcgtagccg cagagcctgt
    40621 aacagtgaat tacgtggatg atactggaaa aacactcgct ccatccgaaa cattaaacgg
    40681 aaatgtaggc gacacatata acgccactgc caaacaaatc gacggctata cattaacaac
    40741 tacaccaaat aacgcaaccg gaacattcaa cacaagtagc caaacagtga catatgtgta
    40801 cactaaaaac atcgtagccg cagagcctat aacagtgaat tacgtgaacg atactggaaa
    40861 aacactcgct ccatccgaaa cattaaatgg aaatgtaggc gacacatata acgctactgc
    40921 caaacaaatc gacggctata cattatccgc cgaaccaacc aatgcaactg gacaattcac
    40981 aagtagcgcg caaaccgtca actatattta cacaaaaaat ccagcccctg aaaaaggagt
    41041 tgtagaaatt cactatgttg acgaaaataa taaacaactg agctccgcca ctaaaatttc
    41101 tggaacagta ggagataatt acacaactga gccaaaaaat atcgacggct atacgctaac
    41161 aactacacca gataacgcaa ccggaacatt caacacaagt agccaaacag tgacatatgt
    41221 gtatactaaa aatatcgtag cagcagagcc tgtaacagtg aattacgtgg atgctaatgg
    41281 caaaacgctc gctccatccg aaaccctaaa cggaactatt ggcgacacat ataaagcaac
    41341 caccaaacaa atcgacggct acacattatc cgccgaacca accaatgcga ctggacaatt
    41401 cacaaatagc gcacaaactg tcaactacat ttacacgaaa aacacaaaca tcgaccaacc
    41461 tttaccagat aaaaaaacaa cgaaaccgtc taatttaaag acaaccgaag tgaaaaaagc
    41521 ttcagatacc ctaccaaaaa caggcgattc cacaccatgg aaatcagctc tacttggggt
    41581 cttcctatca tccacagctc tagttatctg gaaaaagaaa aaatagtaaa aaagccggcc
    41641 aggattaatt tcccgaccgg ctttttgatc tcaatcttct tccacttgga tagaaacacc
    41701 cacatccagt aattcctcaa ctgcatcaat cacagaaaac tccccataat tgtatactgc
    41761 atcatctaca actaaaatcg gcaaagcttc cattccattc ttatcaatca acatttgaac
    41821 ccgctctggc aagtccactt tcccgacttc tcctagctga atatcaaaca cgatgcctgt
    41881 ataatcaaaa tggatttttc gctcatcttc actttgattc ataaacattt tccatatctc
    41941 taggttaatc tcagactcat tttccgcaga ataaaagtaa ctaatttgct tcatattaaa
    42001 attatttact ttctaaatcg tggacaaaca gcccgcttaa taattttggt tcaaaccaag
    42061 tcgattttgg cggcatgatt tctgcggcat ctgccacacc aagtaaatcg tccattgtcg
    42121 gcgggtacat cgcaaatgcc accgaataac ttccattatc caccaaacga gttagctctt
    42181 ctaatccacg tattccgccg acaaaatcaa tgcgattgtc gcgacgaata tcttcaatcc
    42241 caaaaattgg cgttaaaact tgcgattgta atattgaaac atccagctga ccaataacat
    42301 cgtttggaat cacttcgctt ttcgccgtaa gtttgtacca atttccatct aaatacatcc
    42361 ctacttgttt tggcttctct ggtttaaatg cttcttttcc aaccttctcc acgtcaaaac
    42421 tagcctctac tttgctaagg aaatccgctt caattggcac attcacaacc ctattataat
    42481 caagaatttc taattgctct tctgggaaaa caactgataa aaagaaatta aattctgctt
    42541 ctggcccagc ctctgggaat tcctctcgcc gtttcaaacc aactttcaca gcagattccg
    42601 ttctatggtg accgtctgcg atatatagcg ctgggacttc cgagaacgcc gctgacaggt
    42661 cttctaaaat atgtgcgtcc gtaattgccc aaaccttatg cgcgaccccg tggaagctct
    42721 caaagtcata ttcaggctca ttttcattca cccaagactc aacaagtgca ttaattgctt
    42781 cttttccacg ataagtaagg aaaatcggac ttgtatttgc atcacaaaca tctacatgac
    42841 gaatccggtc taactctttc tcttcacgag ttaactcatg ttttttaatt ttcccattgg
    42901 tataatcatc aatcgacgta caaacaacca gccctgtttg cgggcgacca tccatcgtca
    42961 gttgataaat ataaaatgcc gggtttgctt ctctaccaag ccaaccatcc aactcaaatt
    43021 gttccaaatt atccgctgct ttttgataaa cagctgggtc gtaaggggaa accgccggat
    43081 ctaaatcaat ttccgcctta tcaatatgta aaaaagaata cttatttgca tcaccaagtt
    43141 cgcgcgcctc ttccgaatta agtacatcat atggcaagga agccaccttt tccgctaaat
    43201 ttttaatcgg acgaattgct ttaaatggac gtatatttac cattgttatc ctccttttta
    43261 gtaaaagagc atgaacccgt ctggcaataa ccataaagtt tcatgctctc attatttccc
    43321 gggtaataat tttaaaccgt aacacctaat ggttcaataa ctcgaacacg caaaacccct
    43381 tgcacagcta ataaatcact tttcagttgt tccaaattag cttgcgtttc cttatcaata
    43441 tcaattaatg tgtaggcata ttcattttta ctgcgattta tcatatctaa aatgtttaac
    43501 gaatatttcc ctagctccgt cgtaatttgt ccgaccatat taggaatgtt tttgtgacaa
    43561 attccaattc gcggatgtcc attatacggc atttccacgt tcggaaaatt aaccgagttt
    43621 ttaatactac ctgtttcaag atatgattgc agttctttcg cagccatttt agcacagttg
    43681 gtttcggctt cttccgtcga tgcacctaaa tgaggaaata catgcacttt tttgtggttt
    43741 agtaattctt ttgtcgcgaa atctgtaata tataaacgta aaagtccatc atctaaagct
    43801 tctttcacag aggctgaatc cactaactca ccacgagaaa agtttaataa aacagcatta
    43861 tccttcacta attgtagtgt atctgcgtta aacatgccac gtgttttatc cgttaaaggc
    43921 acatgaactg ttaaataatc gcatgtggcc aaaacttctt ctatcgtcat cgcacgttcc
    43981 acttctttag aaattctcca agccgtgtct actgaaacga atggatcgta tccaaccaca
    44041 tccatcccaa gcgataaagc gtcattggct accaatgcac caattgcgcc tagaccgata
    44101 atcccaagtt ttttgccagc aagttctgtt cccgcaaagg ctttcttccc agcttcgact
    44161 ttctgctcga catcatcttc cgccggtaat tctttgaccc attccgttcc ttccaaaatt
    44221 gggcgcgccg aaacgaataa actcgcaaga actagttctt tcacagcatt ggcattcgcg
    44281 ccaggtgtat tgaatacaac aatacctttt tcagaacaat tttctactgg gatattatta
    44341 actcctgcac cagctcgggc aactgccttc actgtctccg gaaagtcaaa atcgtgtaag
    44401 ttgtaactcc gtagtaaaat cccgtctgct ggctgatttg catcaatcac atatttttcg
    44461 agatcaaatg tctttaagcc ttcttttgcg atagcattaa acgtttggat attaaacacg
    44521 tacttctccc ccttttcttg catttgcaaa tttttccata aaggcgatta gagcttccac
    44581 cccttcaatt ggaaatgcat tataaagact tgctcgcata ccgcccactg agcgatgtcc
    44641 tttcaagttt ttaaaaccat ttgcttcagc ttcttgaaca aaagctttat caaactccgc
    44701 tgaattcgtc acaaaaggaa cattcgtgag cgatctagca gaaggttcga ccggtgaaga
    44761 aaagaaatcc gattgatcaa tataattata taataaggcc gcttttttgc gattcaacgc
    44821 ttcaattcca gcaacgccac cttgctcctt aatccattca aatactaatt ttgctacata
    44881 aatggcaaat gtcggtggtg tgttatacat ggaatcattc tcggcttgta ctttaaaatc
    44941 taacatagaa ggaagtccct ctacttgccc tatcaagtct tcgcgcacga tgacaagcgt
    45001 taatccagca ggcccaatgt tcttttgcgc tcctgcataa attaagccaa attttttcac
    45061 atcataaacg ctcgataaaa tattggagga catatccgca acgaccggga cagctgagtc
    45121 tggcacatca aacattgctg ttccttcgat tgtattattt gtagttacat gtaagtaagc
    45181 cgcgtcacta gaaactgtag gaatctcagg aatatagctg aaattgcggt cttccgatga
    45241 ggcaattact tccacctcta caccctgaat tttcttagct tcggaaattg ctttcttcgc
    45301 ccaagatcca gtgtttacat acgctgcttt tttgccattt gcaagattca ttggcaccat
    45361 atcaaattgc aaactcgcgc caccttgcaa aaatagtact ttgtaatttt ctggaatctc
    45421 catcaattct cgaattaagc tctccgcatc gtctaggatg ttttgaaata attctgaacg
    45481 gtgactcagc tccattactg acattcctga accattgtaa gagagtagct ccctttgaac
    45541 cttttcaagt accggtactg gtaaaactgc cggacctgcc gaaaaattat aaacacgttc
    45601 cactcaacat ctctcctgtc ttcaaatttc cccaattact tacaaaaatt ttcaccaata
    45661 atcgaatact tattggccag atatgagcct tcctcgttac acttatgctt ttcgaagttc
    45721 tgttgttaag aaataaaaaa gccgaacctg tgatattcta cacaatattc ggatttttca
    45781 gcgcttaaaa gtaaacactg ccttttgtac ttttgtatat tatagcagaa acagagctgt
    45841 ttttcagaaa atttatacta aatctacaaa taaatgtgat gtttaaactt tctgacatta
    45901 aaaaagcacg agaaaccgct atttaaagca attctcgcac ttctactttt tgaaaaacac
    45961 ttcacaaaag atgttagcta tttttcactt ttcgtcctaa agtaaaccaa tacacagcaa
    46021 aaaatacaac aagtgcaata attgctgtgc gatacataat agcataattg tagtaagtcg
    46081 caacaatact caaaccaaaa ctaccaacag ccattccaat gtccattccc gaaagaaaag
    46141 tcccgttcgc ggtaccttta ttgtgcggtg cagcccggtc cacagccagt gcttgaagcg
    46201 ccggttgcga catcccgtaa cctaacccga agaataacga tgcgataaac aagctgattg
    46261 caccagttgc aaaagaaaga attaatatcc caattatcat cgaaagcgct cctggaataa
    46321 taacaaaacg gtgtcccttc gtatcataaa gtcgcccagc aaacaaacgg cttacaagaa
    46381 ccataatcgc ttgcccgata aaatatatcc acgttgtcga aatccccagt tctgttccat
    46441 ataccatcat aaatgtctgg atcccaccaa gcggaatagc cattaataaa cacaagcccg
    46501 ccggaagcaa ggccgttttc tcaaacaatt tcattttttg atgtacaatc ttttctgatt
    46561 ttggaatttt cacctgtgtc atcaaaatta aaataaacac catcaaaaca agcgaaaacg
    46621 tcactaaaac atcgaaagaa aaataattca taattaaaat agcgataatc ggcgcaagtg
    46681 acattccaag tgcagtcgta agcccataaa aaccaatacc ttctcccgtt ctgcttggtg
    46741 gcacgagttt agaaacgcct gtagcaatag aagttgttcc gataccccag ccagccccgt
    46801 gaaaaagccg taatataagt aaggccgcca ccgccgttga ccaataaaag ttcactgtag
    46861 ttaaaattaa aatcaaaaag cccacgataa taagtacttt cggtccgaat ttgtcattcc
    46921 aactcccagc aatcgcccgc attaatagtg ctacgatgga gaatagcccc accgccaaac
    46981 tcgcttccat ttgcgttcca cctagctcaa taatgcgagc cggcaacgta ggcataaaca
    47041 ccataaatcc aatatataaa agtacactgc ctaacaataa aaatacgtag tccttcgtcc
    47101 aaagtcttgt cttattttcc aaaatttacc cctctttact ctatattagt agaaatgttc
    47161 tttaaaatag ccgtgaattg ttccaaatct gcgcgagaaa tcccagcaaa cattctttca
    47221 caactcgcct ccacgatatc gcggagttca ttcgtctctt ttctcccttt gtccgttaaa
    47281 gataaaagtg aaatccgtct atcttctgta ctcacttccc gcacaacaag ctctttccta
    47341 agtaaaacat cgacaatccg attcacggtt ggcgtgtcct ttttcgtcca aagagcaatc
    47401 tctttttgcg aaatcggctc gttcgcctca atcccctcta aaaccgacca ttgctctggt
    47461 gtcacatcat aacttgcaat cgaacgcagc aaaaataaat gcattttctt cgctgtcgta
    47521 tttacatcaa atgatatttc atcataatat ccgcgcatat ttatcctcat ttctattgtc
    47581 gtaacaataa ttgtcataac aaccattata catactgatt acttttttga caagaaaaac
    47641 agtcgaataa acgactgttc ctacaataat tccacatcta taatatctct aaattcgatt
    47701 acatactcat acccaacaat atctttcaaa ataacttctt ccgttaacat atctatttct
    47761 agcggcacta agtcctgtgt ttcaatctct ccaagcccaa gaaatgcgga aggatattca
    47821 aatggcgcta aacgcagaga agatacatct gcttcttgaa aatattttaa acgaacgacc
    47881 cattctcgct ttatagcatc ttttaatgtg ataaaaaagc tttcgcgctc taaataatcc
    47941 acttctggcc gactcgttaa aaaagcagca ttcttctctg ttcgcacttg ctctttctga
    48001 attgccgtaa ccatcattat cacctcttaa ctttattata cgaacaaacg ttcttaaaat
    48061 caagtaattt gctaaaaaat ttttttcata agagcctgaa taggtttagc gcttacatat
    48121 tctttttccg acaaaaacac ttgcaaatta atgaatagtt gctatactta tgtaagtaaa
    48181 taacattaac aaaggagttt tattattatg actaatacat ttttagattc tattaaagtt
    48241 cgtcgttcca tttatgcact agataaaaac gtttccgttg aggattccaa aattgaagaa
    48301 attattaaag acgctgttaa atatagccca tcttcattca actcccaaag ctctcgcgct
    48361 gtcattcttt taggagaaaa ccatgataaa ctttggaata tcgtagaaga tacattacgc
    48421 gctatcgtac ctgctgaaaa ctttgcagct acagaagaaa aagttggttc tttccgcgct
    48481 ggatacggaa cagttctttt ctttgaagat actgctgtta ttgaaggctt acaagaaaac
    48541 ttcgctctat atgcagacaa cttccctgta tggtctgaac aatcttcagg tattgcacaa
    48601 cattcagtat gggttgctct tgcaaacgct ggaattggtg catctctaca acattacaac
    48661 ccactaattg acgatgctgt taaagctgaa tggaatattc ctgcaagctg gaacttacgc
    48721 gcgcaaatgc cgtttggtaa catcgttcaa gaagctggcg aaaaagaatt catcgatgac
    48781 gctgatcgtt tccgcgtttt caaataataa atgtttcacg tgaaacaaaa aattccgcga
    48841 ccattaactg gtatcgcgga atttttattt tgccaaactt ttaaatctgc ttctaagttc
    48901 atcacaactt acaataccag caatcccgcc tttaatttct ccatcaacaa gaacaagcga
    48961 atttggtatt ccttttacat caaatttctg agctaatgcg cgttgtttat ctacattaat
    49021 tttcacaact tggacattac cttcttccat ctcagcgaat tgctcaagtg ttggccaaaa
    49081 gcagcgacac ggtgcgcacc actctgccca aaaattaagt aatattttag gatggctact
    49141 aataatctct tccaagttct cttcttttgc aaaaataatc gccatacata tccacctcac
    49201 attcagaata ttccaaagtt gtattgtggt caagcaaagg gttttagaat agcaatatat
    49261 cttgcttttt gttcattttt tgacactttt gtttcacgtg aaacatttta tttgctatgt
    49321 aatatctcta aaatacgtaa atctagcaaa ccagtatttt tcactgtcat atccgcatca
    49381 cgaagtccag aaccaacacc aacgcttaca attccagctg cattaattgc ttcaattcca
    49441 gcctgggcat cttcaatccc aactacttct gatgtttcta aacctaaacc gcgacatgct
    49501 tccacaaaaa tttccggatc aggttttgat ttagtaattt tagccgcatc aacaatgtaa
    49561 tcaaattctt gttccatttc aagagcactc aataccgtcc gagcattttt cgaaacagat
    49621 gcaattgcgc atttgagatt ttgcttttta agatccacta taagttcttt aattcctggt
    49681 aaaacatccg ctggcgtaat ttcttttagc aagctaacat aaaagtcatt tttatcagct
    49741 gcaagagctt caatctgctc ttctgtaaag tcattttcgc ggccgtcttt ctttaaaata
    49801 agaagtaggg agtcaattct gcttacccct tttaacttct cattaaatgc ttcatcaaat
    49861 tcgattccaa tactctcagc tgtttttttc caggctaagt aatgataatg tgctgtatct
    49921 gtgatgacgc catctaaatc gaaaactact ccttttaatg ctgttgtcat tctactcgtc
    49981 ctttccaaac tgccgcaaca tttcgcgcgg ttcttcttaa attatttggt gtttctttca
    50041 gtatattttc taaagttgct ggtttggcaa tggatggaaa tactgcgctg attccgactt
    50101 catatactgc ttctagtccc tcaccaacac ttccacaaat tgcaaaaact ggtgtttctt
    50161 tcggcactac tttcgcaaca cccacaggag ctttcccttg tgcggtttgc ccgtccattt
    50221 tcccttcgcc tacaatgacc aaatctgcat cctcacaaac agttttgatt tgaagtgctt
    50281 caataacaaa atcaattccc gataaaaggt tagcttttgc aaacgtcaca agtccagcac
    50341 caatcccacc cccggcacct gctcgcggca ttgtaaccat ggcgggattc gctaactgat
    50401 aaaactggcg cattgcccca tcagctgttg ctaaatctgt aacggctagc cctttttgtg
    50461 gaccaaacac atacgatgcg ccagcttctc cacaaagcgg attttcgaca tccgtcacaa
    50521 tatttactgt gatgttttct agttcagctg ggactttttc ggaacgaatg gttgctatat
    50581 cagctaaatt tgcgccaatc gggttgacga tattattttc tgcatctagg aattcataac
    50641 caagcgcact agccatgcca attccgccat cgtttgaagc gcttccacca atcccaataa
    50701 taatctcggt cgcacctttt tccatggcgt gcaaaattag ctcgcccact cctttagtac
    50761 tcacttgaag tggatcgcgt ctagtcgtcg gaaccaagtg caaaccacaa acttcggcca
    50821 tttctattaa agcttttttg ttcccatccg taaaagcaac ttgtgctgaa actgggtcac
    50881 caaaagggcc ggacacatcg attttcattt ttttcgcacc taaagcttta cttaaaatct
    50941 ctagcgtacc ttccccgcca tcactgacag ggagtaaatg ataatcagca tccggataaa
    51001 tttcttgaaa gccctcttta atatactctg ccacctcatg cgccgtcaaa ctttctttga
    51061 atgaatccgg tgcaatgaca attttcataa agacacatcc ttctgatcca acttaatagt
    51121 taatgtatct gttaattgat gtttttctcc gtgaataact aattctagca cgctttttgt
    51181 gctttttgaa aggtgtaatc tgttttgcgc aatttctacc aagatttttt cacctttcca
    51241 agagaattca aatgccacag attgccagga atccggtatg tttggcgcga tttcaagtag
    51301 ttctccacta gtatctatac ccgcaaatcc aaaaaccacc gccaaccata ttgcgccgag
    51361 tgaggccgca tgaagcccgt catccgatga atgtggctca ctaccaaggt caattaagca
    51421 agcctcttga aaaaattgat aagcttgtgc gcgatttcca gttcgatttt ctacaattgc
    51481 atggattgct ttacttaaag aggaatcatg aattgttcga ttttcatagt aatccaaatt
    51541 ctgcttcaca gcatctggtg caaacatcct cggaaacagg taaaacaaca tgactaaatc
    51601 tgcttgcttt aagatttgta gttcgttcac ttcttgacga gaataatcta gtagaatccc
    51661 ttgtgttcct tgtgccgcct tatatttatc caaatttatc caatcttttt ctaagaaagt
    51721 atcatcttgc ggaattaagc cagactcatt tgcgacaggt aaatagattt tttcaagaaa
    51781 agcttctgca cgggctacaa aatctgcatt atctttattc cattctaaag cttttttcac
    51841 attatagtgt gccatataat tcgtatacgt attattatcg atatgctcgg tgtattcgtc
    51901 tggaccaatc acatcaagga tttccagtcg tccattacga ttagttgcac ggcttagcca
    51961 aaattccgct gtttcaagga gcagctctga accacactct ttcataaact gagcatcctt
    52021 agtcgccgtt tcatattcac aaaccgcata agcaatatcc gcaactaaat gatgctccga
    52081 aatcgccgac gctacttttt gacgtgtgcc agttcgaata ttaatcgctg caaattcagg
    52141 cgtttcttct tcgccagaga atgcactttc ccacggaaaa agcgccccat tatagccgtt
    52201 tttcgttgcc ttttctttcg cttctttcaa atgaaggtag cgatatttta ataattgttt
    52261 ggcaatttcc ggcttattat aaaggaaaaa tggcataata aaaatttctg tatcccaaaa
    52321 aacatgcccc ttgtaacctt ctccggtaag tcccttcgca ccaacactac aacgaaaatc
    52381 atctttcggc gtcataattt ctaagtgata gcacgcaaaa tctagtgcaa attggtcaaa
    52441 atcattcgtg ctctcaacac ggacacccgc atgctcccaa aaatctgccc ataaagtttc
    52501 cgaagctctt ttcaattctg cataagtcgt atttggaagt tccgcatcca cttgatccag
    52561 ggatgtttta accatgctta ttttctccaa agtaaatagt tgattttcag cgatttcttg
    52621 ctctacttcg gtcattaatt gtctgttttt cgcagtgaaa atcccttttt tattcacttt
    52681 tgttgctatt gtaatatgct gtttgctctc gatggtctca tattcgccaa ccatcaactt
    52741 ctcatcaaaa attcgtagac tcaactccgc cagctgctgt gttccaaaat tagtttgttg
    52801 cgcatcaata ccagttttta ctttgacttt cgccgcaccg ctcaaaggca ttatctccac
    52861 tttagcagca atgacgtgct ttgctgcttt tgaaacaaat cggtgaaaat tcagttgata
    52921 cttcttgccc gcgctacttt cccaagtaat ttttcgaatt aattctcctg tattcatatc
    52981 taaataacgc tcgtaagcat ggactttccc cgcttgcatc gaaaaatttt ccccatcaag
    53041 catcacttgg aaacgcgtca catccggcaa attaacaagt tccgaactca gcgaaccgct
    53101 cggacgatta taaatccccg ccacatacat accgcgaact tgctccggat attcttcttc
    53161 aagagcaccg cgcacgccca aatagccatt tcccacagtc atttggctac catatttatt
    53221 tagataattt aatgcaaatt ccttctcgat tattttcttc ataaagaaac actctcacct
    53281 ttttctgccg attcgtataa actttcaaca attctttgta tgatataacc ttgttcagcg
    53341 ccagcaagtt ccacttttcc agcaccaaga acgctatcaa caaatgcttt catgctgttt
    53401 tcgtgtttat tttcttccag ttgtcctaac ttctctaaca actgaaattc acctgcatta
    53461 tctgtataaa tttcagccgg gtataaactt cctcctgcta aatcaccgaa aaaatcaaca
    53521 tttagcgcac tttctggctt gatatgtagc gcaaaagaag tatctaattc aattaatcct
    53581 ccattttcca gttcaataaa gccgaataaa gaatcctcta ccgtatattt ttccggatcc
    53641 catgaaccaa atgtccccgc acttttcttg gttccgattt tttgaaaact ttttgccgtt
    53701 actttcttca cttttggaaa accaaggaca aacatcgccg cgtcgagcat gtgaattccc
    53761 atatcaatca gcggaccccc gccttgcatt tctttattcg taaaagttcc ccaacccggc
    53821 acgccagaac gacgaagcgc agttgctttc acacaataaa tttcacctag aagcgccgaa
    53881 tttctcttta aaaactgtgc ttcactggaa aaacgatgat gaaaatcata cgccaaaatc
    53941 gcgccttttt cttccgcaag ttcccacatt gctttcgctt ccgccgcact cattgcgggt
    54001 ggcttttcac acataacggc cgctccattc gctagtgaca acatcacatt atcaaaatgg
    54061 aaccgattag gcgtgcaaat actaataata tcgattttct cgaccgcaaa catctcttct
    54121 gccgtagcat aatgcttctc aaaaccattg ttcgcacgaa actcttcgcc acgctccaaa
    54181 cttgggtcgc aaacagctac aagctccagt tcatttcttg tcttataata cgcagcgtgg
    54241 accttctcag cgacttgtcc agcaccgata attgcaactc ttttcttcat atccgaaact
    54301 ccttttagaa aaatccgtcc gctttaattg ggacggattt tctattttaa attaaacagc
    54361 tttttaaatg tgccaacgca tctttataag cttgttctgg attttcactg cgaacacgac
    54421 attcaaaagt taaaaatccg ttgtaaccgt tctttttcag ttgatcaaaa cttgttttaa
    54481 aatcaaggct accgcttcct ggttggtagc gatgattgtc agcaacatga atgtgaccga
    54541 tcgaatcttt atacgtctca agcacagtcg gaatgctatc ttcttcaata ttcatatgat
    54601 agaaatcagc gataatttct acatttttaa gttcattttc atcaatatat ttttgcgcat
    54661 cacttagcaa attaatcata tgatcttggt atctgttaag cggctcaaga taaaccttcg
    54721 tcccagtttc accagcaatt ttgtccaaat aaaccaacga ctcgctcact gctttgaaat
    54781 ctccggcttg gctacgcggc gaaaccattg gcggaagacg atacgtgaac atcccccacg
    54841 ccgctggaac gacaatccct tgcccaccga cttctgctaa agcttctaaa atcgctttaa
    54901 tttcttctaa accattcagt ctgcgctctt caatgaagtc accaatccag ccgtcatagc
    54961 caccacatgc agtactaaca ggtagccccg ttttttcgat agctttcttc acttcgtcca
    55021 aattttcaac aagtaattta ccatcaattt caaaaccttc aaagcccatt tcttttacat
    55081 aagcaaattt ttcttctata ttttctggga aaaatgcttg gttttgtgtg cctaatttca
    55141 ttattatcgc tccttaaagg gtaatcccca ttttaatact taaatcaggt tgttgatcga
    55201 cgtatttcat gtagctctca gctgaatctg caaacggaac gactggatca ataatgtccg
    55261 aacaatccaa gtaaccgttc atcagtagtt cccaacaagt ctcctcgata cgcttacgat
    55321 cccagcgcgg ataatccgga tttggttcac tagccgcacg tgaaaagaca attttcgcat
    55381 tgttgaaatg agcttcccga ccaagattaa atccttctgg gaaaggtttc gcgaaggcta
    55441 cataagaaat tgttccgccg taagctattc cgcgtagtgc cgcttgaagt gcagccgcat
    55501 tcccgctcgt ttcaataatc gaatccgcac caagtttacc agtaagacgc ttcacttcta
    55561 agccaacatc tgtcgtaatt ggatcaaaag tagcatctgc tccatgtttt tcagcaattt
    55621 cacgacgatg actaagtgga tccaccccga taacaacact tgctccagct tttttcgcca
    55681 gttgaatcgc aatttgacca atcgcaccaa gtccgacaac aacaacataa tcgcccgcac
    55741 gaacatgtgc atcacgcacg ccactcatcg caaattgagc cgggtcatag caaaccgcgt
    55801 ttttccaatt agcacctttt ggcaatttac gtagtttata attatcgaca gcttttacaa
    55861 taacagtttc cataatcggt ccgtaagaac aaacaatatc tccaagctcg tattctgtta
    55921 ctttgctccc acattcaact acttcaccaa cgaccatgtt acctagctga aactcgccaa
    55981 atacaatgcc tcgcgcacta tttgtttcac gtgaaacaaa taaattccat tctggtgaaa
    56041 attcttcatc aataaaagga ctaattcctc taaaatcaac tacttctgta ccatgttttg
    56101 gagaagcgaa ttgaacttta attttcactt catcttctaa aacttcacga tcattatatt
    56161 ctactaattc cgccacacga ggcgctgtcg ctactaattt tttcattttc aataacttcc
    56221 tttcttatcc cttaactcca ccgtctgtta agtttccttt gataaatcgt tctgaaattg
    56281 cgtacataat aacgactgga agcgccgtaa caagcgatgc agccatcatt ctaccccaaa
    56341 tataatcagg tgtactaaat aatgtattca agccaatcgg taacgtgaat ttctctgcgc
    56401 tagataagaa aatcgaagca aacagataat cattccaagc taccatgaag cagtatacga
    56461 acacagaaac aatacccgaa atcgcaagcg gaacaataat tcgtaagata atctggaagc
    56521 gattcagccc gtccatcatt gctgcttctt caatatcagt tggaatcgta tcaaaataac
    56581 ttttcagcat aaatactgca gttggtagtg tttgtacaac catcgtgata attaaagctg
    56641 tttccgtatc atataacccc aaactcgaaa ttattttaaa caacggaaca attaacaaga
    56701 ttccggagaa catataaacc gtgtaaaaac tcgcattaat cgtcatacgc cctttaaagc
    56761 gtaatttcga caacgcataa gcgcctaaaa tccccaaaac gactgcaatc ccggccgcaa
    56821 aaaccgaaac aaccaaacta tttttaaagt acgttaaaaa cggaaaaata tctgggttga
    56881 aaatatcgat gtaatgctgg aaagtgaatt ctttcgggaa aaatgttgga tgtgttgaaa
    56941 tggcttcttt actgctctta aatgaagtca ttaacataat cgcaaatggg aacaacgtga
    57001 tacataaaaa tgcaaccatc gtcacataaa acgcgatttt ctttgttctt tttgactttt
    57061 tactacttac cgccattcaa atccacccgc tttcttgcaa aaataatcac aacaaaaata
    57121 atgacaaata atatgacaga aatcgctgct gctttcccta aatcattgaa tgcgaatgct
    57181 gttttatata aataaactcc aaggatgttt actttattcg tgagtaagta tacatcggtg
    57241 aacatataga acatccaaat cgcacgaagc gtaataactg tcgcaagtac cggcataatc
    57301 gctggcaaag taacaatttt gaatttatcc caaatgttcg ctccgtccat atcagccgcc
    57361 tcataaagcg acttatcgac cgtttgcaaa atcgctaaaa acgaaataaa tgcatacggg
    57421 aagtaacgcc atattgcaaa aaaggttact aaaaagaaac tagaaactgg attatcaaac
    57481 caaagtggcg cttctttgaa cagatggagt acatccacag tcataaaatt aattacgcca
    57541 taaccattat taaacatata tttccatgca aaaataagag aaatagatgg tgttacatat
    57601 gacaaaataa taagcgaccg agccgttctt ctaaaacgaa attcgcggtt aaagaaaatc
    57661 gccacaagta gtcccatccc agtacttcca accactacaa gtactgtata agccacagta
    57721 agacctagtg atttataaaa ctctggatcc ttcaaaatat ctatatagtt ttgtaaaccg
    57781 ataaagactg atttaatatt cggatttagc ggcatatcta aaaaactaat ctggatattt
    57841 gaaatcatcg gatataaaac aagtgctgcc agtaaaacaa aacttggcgc aagtaaaatc
    57901 attgctaact taaagtcgga ccttttatat actttcgttt tcataatgcc tccttaaatc
    57961 aaaaagcgac gtactaaact gttaaaaaag acggggagac tcaactcccc gctatttgat
    58021 tatttacctt cttcagcttt tttctgtgca gcttttaagt ccgctgatac atcgccaccg
    58081 ccaacagtta cgttattaac catctgtgcg ataatgcctg agctagtaat atctcccatt
    58141 tttgtaaggt ttttaccgtc aacaagtccg aaaacttgga tgtcattgaa tgatgctgcg
    58201 atttcatttg gaagttcacc aaacgattta attacttcat tttctttgta tgctttttgt
    58261 tctactactt ctttatttac tggttgcgct ccacctggag acattaatac ccaagttgcc
    58321 atattttctg gttgagacaa gtattcaaca aatttcttcg ttgctttctt ttgctcatca
    58381 tcaagtcctg ctgaaatagt taaaccagaa actgtaccat aaactgcttt ttctttttct
    58441 tctggaattg cgaaaccgat attttttgga tcgccttctt cataaacgga tggaaggata
    58501 tacgtagagt acattgccat tggaactgtt ccattcataa atgcatcttt aatttcagtt
    58561 acatcatttg aaccaggcat cgtgtatgct gacaaatctt tataatattg aagtgcttct
    58621 ttcatttctg gtgtatcaat cgttacatta ccttttgcat ctaaaacatt ggctttatta
    58681 gaaagtgcga attgggagaa agcttgctca ctcatcgtgc tttctgctgt tggaattgca
    58741 ataccgtatt ttttatctgc tttatttgtg aattttttcg ctactttttc aatatccgcc
    58801 cagtttttag gttcttcaaa accagcatcg gctaaagctt ttttgttgta ccaaatacct
    58861 tgaacccaac cgcttaatgg tgctgcgata tagcttttac catcttcaga acgtactaag
    58921 tttgttgcac cttcgtagta tttgtcttct ccaaccgagt cgataacttc tttcactgca
    58981 tcttgatcaa tcaactcatc tttatccatt actttggcaa aatcttggct tacttccata
    59041 actgctggaa gtttaccaga gcgagcaagt gtgacaactt ttgtattaaa cgcatcttct
    59101 tcaactggaa tttgtttgat tttgattgtt ggattttctt tttcaaaatc agcaattaat
    59161 ttattaataa catctaaacg ctctttttca acggatgaat gcataaattc aatcgttact
    59221 tccttactac tagactcttt ccctccacat gcagctagaa ccgcacttag aaccaacaca
    59281 acaacaagta atacaagact ctttttcttc atttttgttc ctccctgtaa tttttggttt
    59341 ttagccagca gaattcatag ccactaagct ttatggaatc gctcccagtt actgtggagc
    59401 ccgtataaag atttgtataa acaccgctgt ctagtgaata actcacttct ttttctgata
    59461 aattatgaat caatataatc gattccacgt cggatgaacg tttaacaaca aacaattccg
    59521 ccgtagattc taaaacttcc atcggtattt ctggatggaa aagtgattcc gcttttcgtg
    59581 tgctaattaa tttcgttaac gcatcataag ttgcttttcg taaggagcct ctttgttcca
    59641 actctgctgt aatttccgcc aagtcgtatt tttttcgatt aatagagcga ttgtggcctg
    59701 ttgtttctac gcctgaataa tcattgcggc ttcctaaaat actttgaaca taaacggctg
    59761 gaacgcctgg gatagacatt agtactgcat gagccacaag aaatctcgac atcctcaagt
    59821 catctgtgtc cgcctgttta cttagcgcat ccatgtacgt cacgttaatt tcatacggac
    59881 tcttagaacc atctggattt tgcttatatg aaacgagcgc gccttcttcc tccaaatcat
    59941 tcactaaagc caaaatttca gcttctggaa taatgccgcg cactggattt aacccaatcc
    60001 catcatgtga ggcaaggaaa ttaaagaatg ttcgcttgcc ttctggtagc tctaaattct
    60061 tcgcccagtt acggaggaat tctgcattac catgatgtat cgcatggagc acaagtggtg
    60121 gaagcgggaa ttgataaacc atatgcgctt ctttttcacc atttccaaaa taactaatat
    60181 tatcaacatg cggcacattg gtttcggtta taataatcgt ccccggagct gcaatgtcta
    60241 ctaaatctct aaataatttc acgatttcat gcgtctcttc taaatgaatc gagctcgttc
    60301 ccggcacttt ccacataaag ccaaccgcat caagtcgcac atattccgca ccttcttcta
    60361 aatagaacat caaaacatca atcatcttgt aaagcacttc cggagaagca aagtttaaat
    60421 cgatttgatc ctcactaaaa gtcgtccaaa tatgccctac ttttcctgaa tcaaattgaa
    60481 atggtgtcag cactggtgtc gcacgtggcc ttgttaccga actaaggtcc atctttggat
    60541 ccatttccac aaaaaagttc ctaaactcct cgtcacccgc caaatatcgc ttaaaccaat
    60601 cacttttcgc cgacatatga ttacaaacaa aatcaaacat caagcgcgcc gactgttcca
    60661 tctccttaat atcttcccaa tcacccagct ccgggttcac cgctttataa tcgatgaccg
    60721 aaaacccatc atccgaagaa taaggataaa aaggcaagaa atgaactacc tcaaaagtcg
    60781 attttaaata actatcatac attttcttaa aagtttttaa cgtttttttg gattcctctt
    60841 taaattggtc tccatatgta attaaaacaa tatctttctc gtcccactga tcttttcgtg
    60901 ttaactttcg ttgttgcgtt tgctgtaccc gcgcttcgat tctagctgcc aaactatcta
    60961 ccacatcttc ggcatataac cgcgaaagtc gttttcttaa attcgtcatc atttacctcc
    61021 taaccgggag cgctcccaca agaagaatta tagtatggaa agcgctttct gtcaaacaca
    61081 atttttaatg ttttttctaa cacgttgata atagtgagtt ttctctcata tataacatct
    61141 agttggacat ttactagaaa attgagtaat ataaacatgg atgataatga ccggaaccga
    61201 taccggaaac aataaagaga aaggaagatt accttggcat caaccatata tgatatagca
    61261 aaacatgcgg gagtttcaaa atcaacggta tctagagtac taaacaatca agctaacatt
    61321 tccgaagaat cacgaaaaaa agtactagaa gcgattgacg aactaaacta ccagccaagc
    61381 aaactagcgc gcgcacttac ctcttcgggc tttgatgcta tcatggttat ttcaaatcgc
    61441 tctactacaa ccacaaccgg aaacccattt ttttccgaaa taattcaatc gatttccact
    61501 caagctgagt tggaaaattt cgacctaatt cttcaaactg ctaaaaacag cgaagacgaa
    61561 cttaaaaaat gcctctccaa aattcaagaa aaaatgataa aaggcattat tatgctaagt
    61621 tctcccgctg atgaagattt ttttcaccaa ttagacccgt ataatatccc catcgtcgtg
    61681 accggaaaag tagaaggtca ttacaaaaat atatactctg ttgacaccga caattttggc
    61741 gacagttatg ctctaacaaa acatttaatc aagcaaggtc atcaaaaaat cgcttgtatc
    61801 catgctccac tcgattatca cgtgtcgata gatcgtcttg ctggtttccg cagctgcctg
    61861 tttgaccacc aattagattt acgtaacgac tggattattg atagcggtta tagtatagaa
    61921 gatagctaca aagcagcact acgcctaatg gaaggcccag ataaaccaac cgcagttttc
    61981 gcaaccgacg atttaaaggt ccttagcatt tacaaaatgg ccgccgataa aaacttacaa
    62041 atccctgcag atttttccgt catcggctat aatgataaag tagcgtcctc tttcttgtcg
    62101 ccgccgctaa cgtctattga tattccaatc aacaaactag ggaaaaaagc gactaactta
    62161 ttattccgct taatccatca agataaaaat gtaccaaaaa caacgattat taaaaccgaa
    62221 atgattgaac gtgaatccat tcagaaaata aacgtctaaa cttattttct gagtttactg
    62281 gtcctgtagc tcagttggga gagtatcacc ttgacatggt gggggtcgct ggttcgagac
    62341 cagtcgggac catttataaa aaaagcaccc ttttataaag gatgcttttt ttattttatt
    62401 taaataactt acctaatttc ttaaacaatc catcctcaat gatatcaata ccgatacccc
    62461 agttactctt gagaatttct ttattagctt ccacatattc ttccaaatcc ttctctttaa
    62521 tagtgagatt gtgatatgga cgatattcta aataacaaga agctccgttt ttgtgaattt
    62581 tcttcgtcat acgatggttc aaatacttag atttgatgtc acattcttga cgtgtgtagc
    62641 gttcttgctg atcaattgat ttatctgtcg tcaaatgaag ttctgttttg atgacattcc
    62701 gatcaatcca atatggaaaa tccttatgaa aatgtttttc cgcaccatca tcaataaaat
    62761 tattccaatt ccaaaaatgt aaataacgct ttttattttc tacaatatat ggatcggaaa
    62821 tagttgcttt ataaattata gaaagctcat ttaagtcttt attatcttcc acaatttgaa
    62881 tggatgtatt actaaaatga ctatcaactt cattttcttc atatttttta tataaagtca
    62941 tattgctata aatcgaaaaa ttatatcgat tgataatgtc tttattggaa tcatttttaa
    63001 acatttctcg tgacccgttt gccattccac cgcgtaattt tctttcaaaa gtaatttcag
    63061 ccgcattatc tttaacatcg cagtaaacca cttcttccac agatggaatt tcatcttgaa
    63121 atggctcttg tttttgcaat tccgtacctg atttaatttc caaataatac ataaaactat
    63181 ttttttgacg attagccaaa aatccttgat cactactcat tgtagcatca ataaaataga
    63241 cttgattatt atgcgttatt tttaaaatcg catggttaaa gttgaatggt gacggtgtat
    63301 aaactggtag gaatacatca ctaccatagt taaccaaaat aagctctgaa ttcacgtcta
    63361 aataatctaa aatcactttc aaaagaactg ttttcgcctt acaatcgcct tgtttcgttt
    63421 tataagtcac ttcagcagct tgaggttcat gaccatccat ctctgtttca ttatataaat
    63481 agtatacttc tttttgaaca aaatcgatgg catgcttaat tttatggtct aatgtcggta
    63541 actcatctag ttcagccact atatcagccg caaattcagc aaggtttact tgatagaatt
    63601 tttgataaat gtcactgatt gtttttgtaa tttgcggata cgactgctcc gtaacaaaat
    63661 caacaaacgg tgtaatttca agttcttttg cgtcttctcc aatataatct tctttttcga
    63721 ttgtataaga ttcgttatgt tcaaccataa ctttgtcttt ttctaagatg gcgcctgctt
    63781 catctcggaa ataatggaaa ttcgcttcta attttttctc cgtttcattt tttaattcaa
    63841 aacggtattt tccataagcc cagtaggaat ttggcgcgga ataaatccag cggaaaaagt
    63901 cattgcgaat gctgctttct tcatatttac gctcaattgt cgtctccaca ataaagatat
    63961 catttaaatg taagtcacga ataagtactg tcactttttt ctcatcatta aaactcgctt
    64021 gattttcatc acgaacatag tcaagtactt ttacattaat gtcatccaat ttatcaatca
    64081 ctttaccatc acgaacaaca gataaagtgt gaatgtataa tacctcttct tctgataaaa
    64141 taaaactcgt cttgccggct gaattgagca tgttgggttc atttaatgta tatgccatcg
    64201 aagtataact cgtgcgtgaa tttggtttag ccgtttctac aatattacac cagaagcagt
    64261 aatcacgttc ttgcgcaatt tgtgcatcgt aaaaagtttt atcttgtgtc tttaaccaag
    64321 aatcaatgtt ttcttgtttt gtttcaggag aacttaactc tggttttata aaataatatt
    64381 cttttgtcat tgtgtaatct ccttaagtgt tttagataac cttattctag caataaataa
    64441 atagaacaaa caaggcaaaa tctttatgat ataataactt ttggtttatc tacactattt
    64501 agtaaaaaaa tcgacacatt tactactgaa tttcatctat ccacgaaaac aattgcacat
    64561 cttggtatgt ctcaccaatt ttttcataat cccgcagtaa accttccttc gaaaaaccaa
    64621 gcttttctaa caatgcaata gaagcactat ttcttgggtc tacttttgct tcgattcggt
    64681 gcaattcaaa tgattctttt ccccattcca tcaacgctct cactgcttcc gtcgcataac
    64741 cccgtttcca aaagcgtgta cctagatcat aggcaatttc tgcccgatgg ttttcatgat
    64801 caatataatt aaatccgcat gtaccaatga tttctcctgt tacttgcaaa ataatcacac
    64861 aacgaagtgc ctttccttca atttctagtt gtcgtagcat ccgaatcatt tcttcaaccg
    64921 gttgcaaact ttggaaaggt tcaatattca tgtatctagt aacagaatca tctgaccagt
    64981 aaccaaacaa tatttcagta tcagctaacg tcatttcgct taaaaaaagt cgttccgttt
    65041 ttatcatttg cttccgattt tccatacgtt aacccccgcc cttttaataa aagaagctta
    65101 tcaaatctta ctcgcaaagt aaaatgtttc acgtgaaaca ttcgctcctt ctttatcatc
    65161 agagttttta ggtttataat ggaaaatatc tcaaaaagct tcaaaaaagg agaatgattc
    65221 atggaacaga cgaataaacg taatacttta gcacttattt caattatgct tggagctttt
    65281 atttcattat tagatacaac aattgtcaac gttgccttac ctgatatcac aactgctcta
    65341 catgccacga gtgaaaccat cgaatgggta atttcaggct atgcgcttgc ttttggactt
    65401 gtacttattt tagctggtcg actcggggat aaatttggcc gaaaaaatat ctacattatc
    65461 gggattacgc tatttctaat tatgagtgtg acagctggtt ttgcagattc cgaaaatagt
    65521 ctaattattt cccgggtaat acagggactt gctgccggat tatttttccc gcaaatcaat
    65581 gccacaatta tggatatgta ttctggaaaa agccttggga aaatcttcgg aattcttgga
    65641 tctgttattg gtgtgggaac tgccatcgga cctcttacag gaggtctttt aattgaactt
    65701 ttcggaacta caaatggttg gcgtgcagtt tttttcgtta acgtaccttt tgtgttagta
    65761 acgctagtcc tagcaatgct ttatcttccc aaaagaactg tctccacgaa aaaaattagc
    65821 ttcgatttgc ctggagttgg gctactaacc attgcacttt tactattact ttttccactt
    65881 atctcaaacg gcgcaaatga cttcaaaccg atagactatc ttttaatggc gctatctatt
    65941 ccactcttta tcattcttta caaatggagc gtctaccaag aaaagaaagg aaatcagcca
    66001 ttaattgctc ccaacctact taaaaataat caatttgttt caggtatgct tttatcgctt
    66061 gtatactttg ccgcttttac tagtattttc ttcgtcctat cgctaacttg gcaaactggt
    66121 ttcaatcgtt cggctatttt atccgggctt gcaattagtc cttttgcgtt aggtagtgtg
    66181 ttagctgcct ctaatagtta ccgactaatc cctatattag gtagaaagct cttaatgctt
    66241 ggagttgcgc ttgttatcat cgggcttggc accgtgtcta ttgttttcca tttgaacgac
    66301 ggcgcttttt ctgcttggct cttattctta cctcttttca tcgctggtat cggcagtggt
    66361 ttgactattg caccattgaa tagtttcacc ctttccacag taactggtgt ggatcgcggc
    66421 ggagctagtg gtatgtttaa tacagcgcag cgaattggat cgtcctttgg gattgctgtt
    66481 gttggctcag tcttcttccg cacacttgga aatactgccg ctacttcaaa agcaagcgcc
    66541 ttttccgaca gtttgcaaat gagtatgtac gtcaatattg ttctgctcgt tgtttgtttc
    66601 ctacttgtat tccggttacc gaaaaatatt taaaaaagag acatgacttt gcgttaaagt
    66661 catgtctctt ttcttatgct aaatagaaaa cttcttttaa atctaatgca accgggctgt
    66721 tattaggatt tgatttcata attggagcca tatatttcca ccacttttga caaatttctg
    66781 tttctgctat tttgtcataa atggctttat cctcgacttc cacataagca aacaatgtat
    66841 ccgtcttttc atctagaaat atcgaatagt tagctgctcc atgtgctttt aaagcctctt
    66901 tcatttctgg ccaaagtgcg tcgtgtcttt ttttatattc ttcttgatta ccaggatata
    66961 aatacataat agatgccact cgttccatta ttgttacctc ctaattaatt aaataacctg
    67021 cctttgcttc aacgccaaat ctttcaccca gtgctttcaa ttgttcatct gtaatcgctt
    67081 gtttaatacc gccttgtgac atcacaatag tataaacttc tgctgctttc tccgcggttt
    67141 caattaatcc aaatgtttca tccattgatt ttcccgcacc ataaatcccg tgatgtggcc
    67201 aaacgattaa acgattttcc ttcatttttt cagatgtagc ttctccaatt tcattcgtac
    67261 caggaaccag ccaaggaata atcccaacac cttctggaaa aacgactaaa cattccgtac
    67321 acatttgcca taaagttctt gtaaattctc gttccgttag ctcatgtgta aatgtcatcg
    67381 cgagcaaatg agtagcgtga caatgcataa caacgcggtt ttccggatcc acagaaagtc
    67441 ttgcaatgtg actcataaaa tgcgctggaa gttcactcgt tggtagtccg ccgtctgtat
    67501 agccccacaa caaatgaact gctttcccgt cttcactcac ttgaattaca cccaaattca
    67561 cagctggagc ttcttcaaca tttttaaaat atttacccga accagttact aagaaatact
    67621 tgccagcaag ctttttaccg tcaaagtcca ttggaattgt gcgaatgatt tgctttacat
    67681 ctaaatattc cacaacttct ttttcatcca acaaataagt gatattgcca ccgtttcttt
    67741 catcccagcc taaccggtat aaatttgaag tagttttcgc catttcctta ataaaaacag
    67801 catccattat atcctttgtc atcgtcacta tctcctatct ttttagtaat acatcttctt
    67861 cataagcttt tacttctttc aaccagtcaa gaccaactgg aacaccatta atttcacaga
    67921 agtagttcca tacatcgcca aatgggaagt cttttagttc ttctgtaatt gccatacgag
    67981 atgtaaagtc attttccagt tccatttttt tcaaatcagc tgtaggttct aaaagggctt
    68041 taagtaatga tttttgcgta tttctagttc caacaaccca tgcagcaatc cgattgattg
    68101 ttgcgtcgaa gaaatcaaga ccgatatttg taatcccaag taaatcattg cgcaccaatt
    68161 cgcgaccaat ttcaattaat tcatcatcca taatcaccac atggtcacta tcccagcgga
    68221 ctggacgact cacatgtaac attacgcctt tactgaaaag tgccaaagaa gataatttat
    68281 tagaaatgac ttcagttgga tggaaatgtc ccgcatccaa gcaaatcaat ttatcccgcg
    68341 taattccgta acccatataa aattcatgcg aaccgacagt ataagcctct gcgcctaaac
    68401 caaacaactt actttctaca gcttcttggg tatatttttc atctaatttt tctgcaaaaa
    68461 cttcatctaa agcttccatc aaacgttttc tcggggtgta gcgatcaatc gggcaatctt
    68521 ttataccatc cggcacccag aaattattaa tacttgtttg accaagttct ttcccaaagt
    68581 actcagaaat tttgcgcgag cgtttcccgt gctctatcca aaaatcgcga acttctttat
    68641 ctggtgacgc taaagtgtaa ttgtctttaa acattggatg tgaaaagaaa gttgggttga
    68701 aatccagacc caaaccctgc tctttcgccc actctaccca tggagtgaaa tgcttaggtt
    68761 caatttcatt taaatctact ttttcatctg tatctacgta aattgcatgt aagttaagtt
    68821 tatgttttcc aggaataagt gaataagctt tttccaaatc ttggcgtaat tgcttaggag
    68881 tatgagccgc acccggataa ttcccggtcg ccatgattcc gcctgtaagt tcgccatctg
    68941 gatttaagaa acctttaaca tcatcgcctt gccagcagtg catcgaaatt ttaatgtctt
    69001 tcagtgtttt aagcgctttt tccgtatcaa ctccaattgc ttgataacgt tctttcgcca
    69061 cttggtatcg tttactaatt tctgtttctt gtcccattct aaaagcctcc taattaaatt
    69121 caagtacctt agtaaatctt tcttttattt cctcaaatct cacatcacca caagaaaatt
    69181 cgccaatttc aaatgaattt cgaataattt ttcttcccgc acgcatagat tcgatttcac
    69241 cttgattaat catttgtaca actaaatttc caatcgccgt tgcttcagaa ggtcccgcaa
    69301 atacttctat ccctgcaagt ttagctgtta attgatttag catagctaca ttacttcctc
    69361 caccaacaat ataaagtttt tcgattttct taccagtaat ttcagtcatt ttctccaatt
    69421 ctagtgcata atagagtgcc agacttccat acacacaatt tgtcagttct ccaatcgtct
    69481 ccggtatagt ttgtccagtt tcttggcaat acaatttaat ctcatccacc atgttttccg
    69541 ggttattaaa cctggcatca ttgacattaa taatttgctt gaaataagga taattactcg
    69601 cttcctcagc catctcagca aaactatgct tgtagtcgtc catgcgcgca atttcttgaa
    69661 caatccaaag ccccataata ttttttaaaa agcgataagt tccatatgcg ccccattcat
    69721 tcgtgtaatt ttctttaaaa gctgcttcgt tattaattgg cgcacttagc tccatcccta
    69781 ttagcgacca agtcccacta ctcaagaatg cccaattttc tccttctgcc ggagttccca
    69841 ccactgccga agctgtatca tgtgttgcca ctgtcactac atcacaatta ggaatatcat
    69901 actcctctag ccactcctct tttactttac ctaaatacgt acctgcatcc gtcagtggcg
    69961 caaatttttc cacatcaatg ttcaaatgcg aaagtaaatc cttatcaaat aattgttctc
    70021 gcaagttaag catttgtgta gtcgatgaat ttgttgtttc tgccacctta acccccgtga
    70081 gaacataacc aatatagtca ggaatcaaca aaattttctc cgctcgttct agtaaatctc
    70141 gctcttccac gtacagctga tatagagtat ttaattccat aaactgaata cctgtttttt
    70201 tataaatata ttctcgtgga tactcactcg ttaaattctg caccgcattt aaagttcgtt
    70261 tatcgcggta actaattgga tctgccaact tctcaccgga agcccctatc aaaacatagt
    70321 caacgcccca cgtgtcaata ccaagcacac attccgaaat tcctagttgc tttacttttt
    70381 ccaagccaat aaagatttcc tgcatcagtt gatcaatttc ccagcgttcg tgcccatctc
    70441 ggtacgtaaa accattttta aaacggtgaa tttcttctaa ttgtaatttt tcattcacca
    70501 atttccctag aattaatcga ccacttgatg caccaatatc tactgcaaca taatgtttca
    70561 ctggtctagc tccttttctt taatcaattg tatttccgta acgttccttc gtaatatcat
    70621 caagtgatct gccacgtgtt ttcggcgccc aaattacacc gattaaaagc gacactgtaa
    70681 gtaaaccaat cataattgtc cccgccacag taaagccaag atttgccaag attactggga
    70741 acacaatcga ccagacacct gtactaccac gaactaagaa aaacatcacg ccttgaaccc
    70801 caccacgata ttttgttgga aaaagttctg ttgaccaaag tgcgtaaaaa gcttgtgcac
    70861 caatccctgc tgaaataccc cataaaataa caaatgtcca taagccaacc caagacattc
    70921 caacaaaagt aagtacaacc caagaagcaa ctgccattaa agcccctaca aaaaacaatc
    70981 cacgatgact tactcgatca ccaaatttag caaagccaaa gtatgtagaa gctgctgtga
    71041 gtatccataa tacagcttgc aataaattcg cttgtgtatt agaaagacca cccaccgttt
    71101 catatacaaa cggcataaaa aatcccattg cacccgctac taaattccaa aataagtaca
    71161 cacccactaa gaaaagtact gattttacat ttaccatact agaaaatgct gttttaaaag
    71221 ggtgttccaa acgattacca ctttctttca ttttcacttg ctccgcttcc cagtccttcg
    71281 actcctctaa tttacgttgt aactgccaag caacaaacgc tacaatcaat aaagataaga
    71341 aaagtaagcg gttacctaaa agtccaagtg gagatacaat aattcctaaa gtaaagataa
    71401 ttgctggccc acatgaccaa gcaaattgag atataccaat atttctagct cttatactag
    71461 gatccgccat ttcagaaata tatgtccatg aagccggaac cccagcccca acagaaagac
    71521 ctgtaactaa aaatccaatt aatagcattg ggaaattcat tgcaaacata atgattgtaa
    71581 ccccaagcat atacaccaac atgttatacg tataaataaa tttccgtcca tatttatctg
    71641 ctaaatgacc accaataagt gcgccaattg cagaaccaaa cgcattcgcg ctcacagccc
    71701 caagtaatcc caccgcaaaa ctgctaagtc cgaattgtgt tgcccacaaa gttagtccac
    71761 ttgctcccgc tacaatacat ccagaatcta aatagttcgt caaagatacc gctatcgttc
    71821 cttttttact tgtactcgat ccagccattc ttttaaccct cctacttatt ttagttaagc
    71881 gcttacttta tattaaacaa ttaatgattg cgctttacaa tatcctgtgt ttataattaa
    71941 agtat
//
LOCUS       DASDYK010000004        61986 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.004, whole genome shotgun sequence.
ACCESSION   DASDYK010000004 DASDYK010000000
VERSION     DASDYK010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 61986)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 61986)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..61986
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.004"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..174)
                     /locus_tag="U0308_000279"
     CDS             complement(<1..174)
                     /locus_tag="U0308_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topology modulation protein"
                     /protein_id="HEM2315294.1"
                     /translation="MKIRIIGSVGSGKTTLAKKLSEWQQIDYFETDRIVWKREETEVR
                     RTDNEKIAVLNKIL"
     gene            263..712
                     /locus_tag="U0308_000280"
     CDS             263..712
                     /locus_tag="U0308_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEM2315295.1"
                     /translation="MIILFIVSGLLAGMVLPVQTAINTRLSTYTKSPFLASWVSFMVG
                     TTVLLIVCLFTQKSWPISSEMIASNPWYIWVGGGTLGVIFLTANILLLPRLGSALLVM
                     ITVCGQMIMAIIIDNFGLFQVPMHEINIERLLGVILMFGGIYLMQRF"
     gene            727..1194
                     /locus_tag="U0308_000281"
     CDS             727..1194
                     /locus_tag="U0308_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEM2315296.1"
                     /translation="MTKRSSKSLLLFMAMGLVSGLLSPIQTSINSQLRLTVGSPFVAS
                     FISFLVGTTLLTLVCLIVERRLTFQLKGVGRIPWWVFTGGALGVLFVTSNILLLPLLG
                     SAMTVVLALCGQMIIALIIDHFGFFGVIPHPINRYRMIGVLLMLVGVFLIQRF"
     gene            complement(1239..1805)
                     /locus_tag="U0308_000282"
     CDS             complement(1239..1805)
                     /locus_tag="U0308_000282"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEM2315297.1"
                     /translation="MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYT
                     ITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEP
                     PEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFA
                     VARVVNYRAGETDIFYKNSELVFRNKKK"
     gene            complement(1769..3304)
                     /locus_tag="U0308_000283"
     CDS             complement(1769..3304)
                     /locus_tag="U0308_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HEM2315298.1"
                     /translation="MVKQIMIQGTASDAGKSVLVAGLCRLFKNKGKRVVPFKSQNMSL
                     NSFITATGDEMGRAQVFQAEAAGVFPDVRMNPVLLKPTNDRQSQVVFMGAILDNMDAV
                     TYHDFKQTLIPKIQAVYQSLADENDIIVLEGAGSPAEINLNDRDIVNMGMAKMVDAPV
                     VLVADIDKGGVFASIYGTIMLLNEEERARIKGVIINKFRGDVALLQPGIDMIEELTNV
                     PVIGVIPYANLQLEEEDSVSLSGKNYVPDSNALLDIAIICLPRISNFTDFHILEIQPD
                     ISVRYIRNIADFGNPDLVIIPGSKNTLEDMAFLEESGLKNAIQNYAKNAGKVIGICGG
                     YQMLGKKMLDPNQVESKQLEIAGLGLLDTETIFLDQKRTTQITGVTHSGEAVEGYEIH
                     MGETKRGESTSPFCEIKAVNGNEETHQDGAISVNKNIIGTYIHGIFDNDVFLGNLFDE
                     LLTGKNKSVYPHEIINLKEHKEQEYDKLAALLEANIQMDQLEKIMKGEKICVSTQKPA
                     IKE"
     gene            complement(3304..4110)
                     /locus_tag="U0308_000284"
     CDS             complement(3304..4110)
                     /locus_tag="U0308_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2315299.1"
                     /translation="MLKTEHISFQYEDGKQALTDVSIDLEKGNIIGLIGANGSGKSTL
                     FMQLLGINKPSDGTVYFEGKPLAYTKKALFALRKKVSIVFQDPDQQIFYSNVRDDVAF
                     ALRNLGVSETEVEARVTKVLDIVGAKDFQHKPVQYLSYGQKKRVAIAGALVLDTDWLL
                     LDEPTAGLDPIGKKIMMEIIERLASQGKKILISSHDIDLIYEICDYVYMLKDGSVLTD
                     GETSNVFLEKSNVEQAGLVQPWLIKLHQQAGYPLFKKEADFFAHTGKVTN"
     gene            complement(4123..4800)
                     /locus_tag="U0308_000285"
     CDS             complement(4123..4800)
                     /locus_tag="U0308_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     transmembrane protein"
                     /protein_id="HEM2315300.1"
                     /translation="MLTIDKYAYQNRWIAFSPSLKALFYVAILILALTGPVLIQAILF
                     FCMVPLTLYVVKIHFKQYLKWLLLPFSFLLFSLLSILISISKDPSSFLASISIGSLYL
                     GVSDVTITTATQVFFRSIACLAATYFFVLTVPVVQLTKVMKRIFIPKVLIELTILIYR
                     FIFIFLEEAAAIRKAQSLRFGYHGIKNSYRSFGMLVNTLFNRVMKRYNEMVITLDVKL
                     YQGEFHI"
     gene            complement(4787..5083)
                     /locus_tag="U0308_000286"
     CDS             complement(4787..5083)
                     /locus_tag="U0308_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     substrate-binding protein"
                     /protein_id="HEM2315301.1"
                     /translation="MKKININVILILLVVLLMVSPFFFNKTGEYGGSDGEAEAEITKI
                     DPSYEPWFEPLYEPKSGEIESLLFTLQGCIGTGIIAYVIGVSRGKRKAENDVNH"
     gene            complement(5080..5730)
                     /locus_tag="U0308_000287"
     CDS             complement(5080..5730)
                     /locus_tag="U0308_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464729.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HEM2315302.1"
                     /translation="MHIMEGFLPVKWAVFWFIVFIPFLVLGLIRIRKLIALDKNNKLL
                     LALCAAFIFVLSALKIPSVTGSCSHPTGVGLATVMFGPLVVSVLGVIVLLFQALLLAH
                     GGITTLGANAMSMAVIGPMVGFVVYKLARKLNCNKSVSIFLCAMTADLATYLTTSVQL
                     GVVFPDPASGMMASILKFMAIFCVTQVPIAIAEGLLTVVMYNLISKNLPEKVAQLR"
     gene            complement(5811..6521)
                     /locus_tag="U0308_000288"
     CDS             complement(5811..6521)
                     /locus_tag="U0308_000288"
                     /EC_number="2.1.1.151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-factor II C(20)-methyltransferase"
                     /protein_id="HEM2315303.1"
                     /translation="MAKFYGIGTGPGDSKLVTMEAAERLGNLEILYTPQPKKGGESLA
                     KKIVSPYLKDTLIIKERHFPMSYNKEEKMLAWKEIAEEIKADVQNGHDVGFITLGDPM
                     VYSTYSYLLELLKGEIETVTLAGISSFSNIASKIELPLVMDEESFAVIPVTAGAEKIE
                     QALTLFDTVVLMKAASNLPLLTTLLKKLNLLDAAVVVSDVAMATEKITYGMNEINPDE
                     KMSYFTTIIVKKRREQYK"
     gene            complement(6514..7299)
                     /locus_tag="U0308_000289"
     CDS             complement(6514..7299)
                     /locus_tag="U0308_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sirohydrochlorin cobaltochelatase"
                     /protein_id="HEM2315304.1"
                     /translation="MKKAILVVSFGTSYPETREKTIEACEKKVAQEFPDYNVFRAFTS
                     NKIIKKLKTRDNMHINTPSQALNQLKELGYKEVIIQSLHIISGGEFEKITAQVEKFKP
                     DFDSIIVSQPLLDSMEDYEKAIEAIRHQMPPLKEQEALILMGHGSKHRAFSAYACLDH
                     MLLNEPIYLCAVESYPGLDQVIERLQQANIKKAHLMPFMLVAGDHATNDMASDDEDSW
                     KSTLEQAGIQTECHLQGLGENPLIQAQFIDHIHTAIERVKARG"
     gene            complement(7296..8777)
                     /gene="cobA"
                     /locus_tag="U0308_000290"
     CDS             complement(7296..8777)
                     /gene="cobA"
                     /locus_tag="U0308_000290"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEM2315305.1"
                     /translation="MGKVMLIGAGPGDAQLLTVKGLAALQKADVIVYDRLVEPAMLQE
                     RKASCKLIYVGKEPLHHPIPQEEIEQILVKEAATNELVVRLKAGDPYVFGRGGEEGET
                     LYKAGIPFEVIPGITSAIGGLAYAGIPVTHRNFASSFHVITGHLKKGRDPLDWEALAR
                     LEGTLVFLMGMTNLPNICANLLENGRKAETGVAIVQWASRGKQLTVTGNLQNIEQKVA
                     ESGISSPALIVVGDVVSLRPQLNFFEEMPLFHTKVLLPRARAGKSMLAEQIRDLGGEV
                     TMYPNIQVVDVVPTKTKEELREVSGLLFTSKEAVERFFDYLAQLDLDIRSLKNTHLTA
                     IGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQKNVSNLIIGSIVDTAEVNAILA
                     EVEAMEMMPLYDMRPVTERPFDLASFEQVCFSSSRSVQNLLDVLTTEEKAILQTKTIL
                     SIGRFTSATLASFGINNFIEAESATPESLIELIQKTKLEGVPQ"
     gene            complement(8777..9529)
                     /gene="cobK"
                     /locus_tag="U0308_000291"
     CDS             complement(8777..9529)
                     /gene="cobK"
                     /locus_tag="U0308_000291"
                     /EC_number="1.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-6A reductase"
                     /protein_id="HEM2315306.1"
                     /translation="MIFVLGGTSDSLAISDWLTEKKQAFILSVATDYGETLAKQHAEN
                     VFCGRLSKEEMLLKWHATKVHLVIDATHPFATIVSETAMEACKEADIPYIRFERTSEQ
                     TDNTYLVADIEEACAVAMKLGKRIFLTTGSKNLPEFVAGLNNRHIIARILPVSDVIRS
                     AEELGLVADQIIGMKGPFTKEANRTQLEMTGADVLITKESGKQGGFQEKLAAAAELNI
                     PVIVIRRKKLNYPIEINHLSELPEILTQLEVY"
     gene            complement(9526..10251)
                     /gene="cobJ"
                     /locus_tag="U0308_000292"
     CDS             complement(9526..10251)
                     /gene="cobJ"
                     /locus_tag="U0308_000292"
                     /EC_number="2.1.1.131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B C(17)-methyltransferase"
                     /protein_id="HEM2315307.1"
                     /translation="MIYVIGIGPGDKRLMTGEALQAIEDAEVIVGYVTYIKLIKELIK
                     DKEVVKTGMRREIDRCQEAVDIALTGKKVAVVSSGDAGIYGMAGLVLELAEKSNPDLE
                     VKVIPGITASIGAAAVLGAPIMHDFCHISLSDLMTPWEVIEKRLTHAAMADFVVCFYN
                     PRSKGRANHLANAFQKMMEHKSGDTVVGIVKDVGRKEERKIITTMRDIDYELVDMTTM
                     VIVGNKETYVKNGKMITPRGYTL"
     gene            complement(10248..11279)
                     /gene="cbiG"
                     /locus_tag="U0308_000293"
     CDS             complement(10248..11279)
                     /gene="cbiG"
                     /locus_tag="U0308_000293"
                     /EC_number="3.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin 5A hydrolase"
                     /protein_id="HEM2315308.1"
                     /translation="MNTDKLAIIAVTERGRDLAITLTKTVAATIFVPGKHCNEQTNSL
                     TPDFGTAMREIFTKYQALICIMATGIAVRTLAPAIEDKLSDPAVLVMDEHGKFIISLL
                     SGHVGGANELTEQIAAITGGAAVITTATDRANVAAIDNIAKQLNGYLPDFKATTKRIN
                     GLLAAGKEVGLYIDEPLDIDTRGFTMEEVSPQVYISTKYKLQVATHERIQLVPKQFIL
                     GVGCRKGVSAETIAAAFTHFCEQENIHPRAFREIHSITLKAEEPAILHLAEKWRVPFI
                     VHPAEELQTVAGKYPTSAFVQKTVQVGNVALSSADIGSNGNVVTSRFAENGVTFAAGK
                     LTKNSEVAK"
     gene            complement(11266..12015)
                     /locus_tag="U0308_000294"
     CDS             complement(11266..12015)
                     /locus_tag="U0308_000294"
                     /EC_number="2.1.1.271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-4 methyltransferase"
                     /protein_id="HEM2315309.1"
                     /translation="MAEVHFVGAGPGDKELITLKGYQLLKEADVVIYAGSLVNPELLE
                     YCKPDCEIHNSASMNLIEIIDCMEAGVTAGKEVVRLQTGDFSIYGSIREQVEEMKKRS
                     IPFTCTPGVSSFLGAASSFGVEYTVPEVSQSVIITRMAGRTPVPSRESLRSYAAHQTS
                     MVIFLSVQGIRKVVSELIKGGYKPETPAAVIYKATWAEEKKVTGTLEDIAEKVTEAGI
                     TKTALIMVGDFLGEEFYYSKLYDKDFKHEYR"
     gene            complement(12021..12590)
                     /locus_tag="U0308_000295"
     CDS             complement(12021..12590)
                     /locus_tag="U0308_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating cobalt-precorrin-6B
                     (C(15))-methyltransferase"
                     /protein_id="HEM2315310.1"
                     /translation="MKDEVFIRGKVPMTKAEVRAASIDLLNLDDTSKKLLDVGAGTGS
                     VGLQVACNFPKIQVTAIERNPDAVDLIKQNQAKFGLENVTVIEAYAPIELPEKETFDA
                     IFIGGSGGNLTDIIDWSLAHLNPGGGLVLNFILLENALTAMNHLEKLTVSELTMKQIQ
                     VSSWHKLGAGHYFEPQNPTVIIGCKKLEE"
     gene            complement(12580..13176)
                     /locus_tag="U0308_000296"
     CDS             complement(12580..13176)
                     /locus_tag="U0308_000296"
                     /EC_number="2.1.1.289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012581515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-7 (C(5))-methyltransferase"
                     /protein_id="HEM2315311.1"
                     /translation="MITVVGIGPGDTNLVINEAKQVLSTAEIVYGSTRQLQEITELTT
                     ATPMLLPKKLADLKNIPHQNKNVVILASGDPLLYGIGNWALANFSEDVRIVPGISAIQ
                     MMFHRIQLPMNDCFITSSHGKTPNFDFLLQHEKVAMVTDTIIGPYEIAAEILQRGLKK
                     ILFIGENLSSKEERIHKLKPEQVAKKYDMNVVVIVDEG"
     gene            complement(13173..14294)
                     /locus_tag="U0308_000297"
     CDS             complement(13173..14294)
                     /locus_tag="U0308_000297"
                     /EC_number="2.1.1.195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-5B (C(1))-methyltransferase"
                     /protein_id="HEM2315312.1"
                     /translation="MEDFIYYNGKKYRKGYTTGTCAAAAAKACVEMILTQEEVSAVQV
                     TTTGGTILEIPVAYQKFSKDKATAAVQKDGGDDIDATHGMWIFVDVDLTDNAEVVLDG
                     GVGIGRATQKGISVAVGEAAINPAPRKNILATVRESLGENRGAKILVYAPEGEERAKR
                     TMNSNLGIIGGISILGTTGIVTPMSDEGWKKSLSMELEMKRNQGLDQIILVPGNYGDD
                     FVQNTLGFSSGNIVSMSNFVGYMLKETQRLAFKKVLMVGHFGKLVKVSAGIFTTYSKD
                     ADARAEILVANLALLGAPLSLLQAVEKCNTTEAAGELIEEAGFTQVYDVIVQKIKARS
                     ERFLKFTKPSVEVDVVTFSTERGLLAATKDIDVLREEWR"
     gene            complement(14310..14942)
                     /locus_tag="U0308_000298"
     CDS             complement(14310..14942)
                     /locus_tag="U0308_000298"
                     /EC_number="5.4.99.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-8 methylmutase"
                     /protein_id="HEM2315313.1"
                     /translation="MNYIKNPAKIEEKSFEIIQQIINDIRPDYTFQNKLEEAIIKRAI
                     HTTADFDYLDSLVFQQDAIAKIIHVLQNKGTIFTDTNMALSGINKRLLDELGCKYHCY
                     VSDPETMEIAKQHGITRSMAGIKLASLKDGPKLFVLGNAPTAVYKIIEMTESGELQAD
                     AVVAVPVGFVGAAECKEEILETDIPAIVARGRKGGSNLAAAIINAILITM"
     gene            complement(14955..15902)
                     /locus_tag="U0308_000299"
     CDS             complement(14955..15902)
                     /locus_tag="U0308_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HEM2315314.1"
                     /translation="MILLFYTSSFILDCLLGDPYSWPHPIKAIGNLIKWLTIILRKIF
                     HGKSLYFAGGLLFVLTVGMTGVVSWFILFLSAKIAYWLYIAVFVYLGYTTLAMTCLAK
                     EARKIQRTLADGDLAAARVQVGMIVGRDTDKLTAEEISKATIETVAENTADGVIAPLF
                     YLFIGGPVLALMYKAVNTLDSMVGYKNEKYRAIGFVSAKMDDIANFIPARLAWFFLVI
                     ASFILRYDGRASWQIGLRDRKNHTSPNCAYPEGAVAGALGITLGGTHEYFGETVIKPT
                     IGSGNKPVSEKEISQTIHLLYTASTIAFIIFASIYLLLF"
     gene            complement(15899..17257)
                     /locus_tag="U0308_000300"
     CDS             complement(15899..17257)
                     /locus_tag="U0308_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
                     /protein_id="HEM2315315.1"
                     /translation="MNKILIAAASSGTGKTTITLGIMHALKKRGLRVQPFKVGPDYID
                     TNYHQAITGVASINLDSFLIDDDAMLATLFQKHGESADISVIEGVMGLFDGLGIDRDN
                     SSTSFIAKCTKTPVILVVDGKAISTSAAAIVDGFNRFDPELTIAGVIINRVASENHFS
                     LIKGAIERYTDVPVLGYLPKNAAVALPERHLGLVPKEEMTELETKWELLGDLIAEHVD
                     LDRLLAISKTGAKLTVHPPEIQVPDFSGVRVAYALDAAFHFYYQDNLDFIRSTGATLI
                     PFSPLEEREVPDADFIYIGGGFPEVFAEQLAKNKSMRESILAAHEQGKPIYAECGGLM
                     YLGSSLEMEAESYEMVGVFDGVSKMTTRLRKFGYCIAEPLEDTLLGKKGTAIRGHEFH
                     HSVFETTEPTRMKLTKKRDGKIVKEWHGGYQKGNTFASYLHIHFYQNLLIITHMFGAI
                     ER"
     regulatory      complement(17419..17596)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            complement(17590..18084)
                     /locus_tag="U0308_000301"
     CDS             complement(17590..18084)
                     /locus_tag="U0308_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM2315316.1"
                     /translation="MKIQKLVLCAMLIAMCVIGANIKLMGSVAFDAAPAFIGTLLLGP
                     MYGAVLGIFGHLTSALLAGFPLTLPIHLIVAGMMGVTMIAYGFTRQKLAEKNQLVAVS
                     VSSIVAFVFNCPLSLLALYPLMHQAVFVLFPVLAIGSICNIFVAEVVYQVLPERWKRR
                     IAGY"
     gene            18398..18949
                     /locus_tag="U0308_000302"
     CDS             18398..18949
                     /locus_tag="U0308_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2315317.1"
                     /translation="MEKEKVVNIQPLMDSQVESQFTQQIQEDFNKKNPDHSALLHSLE
                     TVEVLDVLSDYYSAHEKQKQPRKETTSVNKTGKEHKEIKQAIRYIKKNIHRSITLEEV
                     ANYVYLSPFYLSKLFKNELNINFINYVNEQKMLYAKEQLEKSDWAVHTIAKNLGFSRA
                     SYFCKVFKKEFDMTPKEYRDSLK"
     gene            complement(18991..19434)
                     /locus_tag="U0308_000303"
     CDS             complement(18991..19434)
                     /locus_tag="U0308_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF861 domain-containing protein"
                     /protein_id="HEM2315318.1"
                     /translation="MADISKELIEQLVKQVVLEKMGQSSKHVDPSGILSVKLPVVKVS
                     EEDRLDTGNPSDVVYTKDLVTLEESKRLGFGLMEMKDTTFDWFLDYDEVDYIIEGRLD
                     VVIDGRTVSAGPGEIIFIPKGSQIKFSVTGEARFIYVTYPADWQS"
     gene            complement(19427..20548)
                     /gene="eutH"
                     /locus_tag="U0308_000304"
     CDS             complement(19427..20548)
                     /gene="eutH"
                     /locus_tag="U0308_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutH"
                     /protein_id="HEM2315319.1"
                     /translation="MSINEIIIYLMVIFMILGAIDKIIGNKFGLGAQFEEGIMAMGSL
                     TLAMVGIITLAPVLAKILSPIVVPIYTALGADPAMFATTLLANDMGGFALAQELALTP
                     DAGLFAGAILGSMMGPTIVFTIPVALGIIKKEDHKYLATGVLSGIITIPIGCLIGGLV
                     AGFSPIMIFKNLVPIILVAALIMLGLWFKPEGMIKGFTIFGKGVVIVATIGLVAGAIQ
                     QLTGLTIIPGIAPIGEGIEIVGGIALVLAGAFCLVFVITKVFNKPLMKMGKLLGMNEV
                     AAAGMVATLANSIPMFQMLKDMDERGKIINVAFAVSAAFVLGDHLGFTAGVAQDMIFP
                     MIVGKLVGGVTAVAVGIYMANRMMKKNKAKEQTAVKDNG"
     gene            complement(20564..21109)
                     /locus_tag="U0308_000305"
     CDS             complement(20564..21109)
                     /locus_tag="U0308_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
                     /protein_id="HEM2315320.1"
                     /translation="MAEQSLGILELRSISKGYEMADVFLKAGNVTLFTFRPTCPGKFL
                     IILQGASGELTSAMQDAKEEAGKFHVSSYILHMAHEELLAFLNNKHPKVEVDAVGIIE
                     ISQLGAGLNAVNEALKKSAIHLKRMTLGASIGGKFVAVFTGEVSAIQEGMRILIETAE
                     PKKVIHHTVIPSPDELLKRYL"
     gene            complement(21102..21371)
                     /locus_tag="U0308_000306"
     CDS             complement(21102..21371)
                     /locus_tag="U0308_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EutN/CcmL family microcompartment protein"
                     /protein_id="HEM2315321.1"
                     /translation="MQIGKVTGSLWATRKDEKLNGLKLLLVEICTDETEDVRHSIVAA
                     DNAGAGNGDLVLVTTGSAARASTGDNTIPVDACIVGIIDSVERYG"
     gene            complement(21386..21958)
                     /locus_tag="U0308_000307"
     CDS             complement(21386..21958)
                     /locus_tag="U0308_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02536 family ethanolamine utilization
                     protein"
                     /protein_id="HEM2315322.1"
                     /translation="MSMELDALIKAVTEEVMRRLQLPEKKMIIMGQDSEHTLRQCYLK
                     EYQVSLYDRSERACDILLLEELDIAELARISLFAPMNKKEQFITDHLLAGRPTWIMKS
                     GIKAHAYKRSAKYGIRQLFQEYEEKLSRFGVEFIESPVKETKESKVITEQDVEKLTKN
                     KSEFILPKGSFLTPLAKDYLQEKRISIKES"
     gene            complement(21955..22596)
                     /gene="pduL"
                     /locus_tag="U0308_000308"
     CDS             complement(21955..22596)
                     /gene="pduL"
                     /locus_tag="U0308_000308"
                     /EC_number="2.3.1.222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate propanoyltransferase"
                     /protein_id="HEM2315323.1"
                     /translation="MNNELITSLIEEVTRRALLETGVEVEASGRHVHLDRETVDALFG
                     PGYELTHFRDLSQPGQYVCKERISIVGPKSVIHNVVILGPIRKKTQVEISSTDGTALG
                     IKAPVRESGDIAGTPGILLLSAKNSVQLSEGLIVAKRHIHMTPADAEKQQVSQSEIVQ
                     VKINGDRPLIFDDVVVRISPDFATYMHIDYDEANACGFKKGIRGQIIKKTKAK"
     gene            complement(22609..23364)
                     /locus_tag="U0308_000309"
     CDS             complement(22609..23364)
                     /locus_tag="U0308_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin adenosyltransferase"
                     /protein_id="HEM2315324.1"
                     /translation="MAILTEDELRKAYLHTDLKTTKKLDIKKGTIITPSAKSFLSEKK
                     IDLHYIDEIAETKVVVEPVKKETTRAKFQTIYGGALDEKPEHMTHLRGNLLVFKDHPQ
                     IAFRGKLDTLEAEILETQCSVAAEFKDLAEDLQEILTFVRNIVRSEVLNEQIESVHLL
                     GMDEKELRERSHNPKKYYQMTHFMPDYTMGNAVIRLNKIRTMVRETELAAFLAFKEAD
                     YSIKRPDIIQALNRLSSLFWILMFRVRTGEYKK"
     gene            complement(23530..23814)
                     /locus_tag="U0308_000310"
     CDS             complement(23530..23814)
                     /locus_tag="U0308_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
                     /protein_id="HEM2315325.1"
                     /translation="MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGGGLV
                     TVMVRGDVGAVKAATDAGAAAAERVGELLSVHVIPRPHSEVDAILPKSAE"
     gene            complement(23846..25306)
                     /locus_tag="U0308_000311"
     CDS             complement(23846..25306)
                     /locus_tag="U0308_000311"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetaldehyde dehydrogenase (acetylating)"
                     /protein_id="HEM2315326.1"
                     /translation="MALEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIA
                     DAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKV
                     MEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE
                     AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVG
                     PGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGA
                     HFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEETKVGA
                     KIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKK
                     PVSRLLVNTPGALGGIGATTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGVL
                     ELEDIRKEENQATSELPVDADALIQSLVEKVLAELK"
     gene            complement(25306..25827)
                     /locus_tag="U0308_000312"
     CDS             complement(25306..25827)
                     /locus_tag="U0308_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
                     /protein_id="HEM2315327.1"
                     /translation="MPNEALGLIEVTGFLGAVVAADTCLKAANVELIQCEVIRGGLTT
                     VELTGDVGAVNAAIEAGKAATEDLGCLVSSHVIARMSEDTKALFVPQEEVKTQPKEVE
                     QEEPKEVIQQVVEVNTNTKSAEKKLRAMKVIDLRKLAYTLNNVPIPKSKIKYANKDKL
                     VHALKDIYGRSEN"
     gene            complement(25842..26495)
                     /gene="eutL"
                     /locus_tag="U0308_000313"
     CDS             complement(25842..26495)
                     /gene="eutL"
                     /locus_tag="U0308_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutL"
                     /protein_id="HEM2315328.1"
                     /translation="MKNDKLPASVLSVKVVSNVDNGLFKQLDLKPHQRSLGIITSDCD
                     DVTYTALDEATKAAEVDVVYAKSMYAGAGNASTKFAGEVIGIIAGPSPAEVKSGLSVA
                     VDFIENGASFVSANEDDSVPYFAHCVSRTGTFLSKEANVAEGEAIAYLIAPPLEAMYA
                     LDAALKAADVTIGAFYGPPSETNFGGALLTGSQSACKAACDAFKMAVENVAENPLQY"
     gene            complement(26518..27399)
                     /gene="eutC"
                     /locus_tag="U0308_000314"
     CDS             complement(26518..27399)
                     /gene="eutC"
                     /locus_tag="U0308_000314"
                     /EC_number="4.3.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutC"
                     /protein_id="HEM2315329.1"
                     /translation="MNEQELKQMIEGILTEMSGGKTTDTVAAAPTKSVVETVITEGSI
                     PDITEVDIKKQLLVPEPADREGYLKMKQMTPARLGLWRAGPRYKTETILRFRADHAVA
                     QDSVFSYVSEDLVKEMNFIPVNTKCQDKDEYLTRPDLGREFDNEMVEVIRANTTKNAK
                     LQIVVGDGLSSAAIEANIKDILPSIKQGLKMYNLDFDNIIFVKHCRVPSMDQIGEITG
                     ADVVCLLVGERPGLVTAESMSAYIAYKPTIGMPEARRTVISNIHSGGTPPVEAGAYIA
                     ELIHNMLEKKCSGIDLK"
     gene            complement(27419..28783)
                     /locus_tag="U0308_000315"
     CDS             complement(27419..28783)
                     /locus_tag="U0308_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutB"
                     /protein_id="HEM2315330.1"
                     /translation="MILKTNLFGHTYQFKSITDVLAKANEEKSGDRLAGVAAESAEER
                     VAAKVVLSKMTLGDLRNNPVVPYETDEVTRIIQDQVNDRIHDSIKNWTVEELREWILD
                     HKTTDADIKRVARGLTSEIIAAVTKLMSNLDLIYGAKKIRVIAHANTTIGLPGTFSAR
                     LQPNHPTDDPDGILASLMEGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDV
                     PTQTCVLAHVKTQMEAMRRGAPTGLVFQSIAGSEKGNTAFGFDGATIEEARQLALQSG
                     AATGPNVMYFETGQGSELSSDAHFGVDQVTMEARCYGFAKKFDPFLVNTVVGFIGPEY
                     LYDSKQVIRAGLEDHFMGKLTGISMGCDVCYTNHMKADQNDVENLSVLLTAAGCNFIM
                     GIPHGDDVMLNYQTTGYHETATLRELFGLKPIKEFDQWMEKMGFSENGKLTSRAGDAS
                     IFLK"
     gene            complement(28825..30246)
                     /gene="eutA"
                     /locus_tag="U0308_000316"
     CDS             complement(28825..30246)
                     /gene="eutA"
                     /locus_tag="U0308_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HEM2315331.1"
                     /translation="MTETILSVGIDLGTSTTQLILSELEIQNMASSFTVPRIVISDKR
                     IIFRSEILFTPILADNLIDVEAIRDFVTKEYANAGIKKEEIGMGAVIITGETARKDNA
                     SNVLDAMSGFAGDFVVATAGPDLESIIAGKGAGAHTYAKENNTSVVNLDIGGGTTNLS
                     LFDRGELIDTACLDIGGRLIKVDRETRKITYIAPKIQALIEKRGYPVKLGETTSPENL
                     QPVLGEMVELLKNSVGLGAPNDFYETIITNKGLKFLTEIECISFSGGVADCISTGALS
                     DPFRYGDIGLLLGKAIAESSLMTEKKYIESVETIRATVVGAGSHTAEISGSTITYTEK
                     IFPVKNIPILKLAKQEEDENMAEVIKEKLSWFKIENEMEHIALAIEGENSPSFQQVTE
                     YAKAICEGMKEPIALGHPLIIITWHDMAKALGQSIFGHLPAGHPLICLDSVKVDNGDY
                     IDIGKPVADGKVLPVVVKTLVFN"
     gene            complement(30336..31793)
                     /locus_tag="U0308_000317"
     CDS             complement(30336..31793)
                     /locus_tag="U0308_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM2315332.1"
                     /translation="MTKTIREMCLRYTDLSEHDIEELIHTAKSLSVSAMYQDVDVFID
                     VYNKLTSEALVIHHTPPKTTKSLYKNKVVGETALRSNEPGVLRTLETGMNSNDLLAKT
                     QENVLIRQKVYPIRNKQRVIAVLILENDISAEIKAHFEIDNEETAYRDVSTTLSAMSK
                     LTDSITDQLDDAILIFDRNGILQQKNCAADQYYERLGYMEDIQGMHYDNLSLDQMMFD
                     AIMYQIETGKQPIQLKKEVVIAGNYFIMKQIFVKEEDEQECRFILILHDITDIKVKEA
                     EIVSKSVAIREIHHRVKNNLQSVVSLLRIQGRRSTSVEAQKILNESVSRILAIAATHE
                     LLSKQMEDGINLYMVIETVAYNIERCCTDCPKVAVRMDIDKRIYLDSDRTVALALVMN
                     ELLQNSYDHAFHPNESGEILLQIKEEKNIIHAEVTDNGHGFNVRKVSEKSLGLSIVKS
                     YIKDKLRGKVTIESNEHGTKTMFDFKYNSIHATKK"
     gene            complement(31786..32367)
                     /locus_tag="U0308_000318"
     CDS             complement(31786..32367)
                     /locus_tag="U0308_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANTAR domain-containing response regulator"
                     /protein_id="HEM2315333.1"
                     /translation="MTGMNGRIVIADDEPITRMDIRDILEEANYNVVGEATDGFEAIE
                     LCKSHQPDLVIMDIQMPLLDGLKAGKRIISEGLAGGIILLTAFSDPKNTEKAKGFGAL
                     GYLVKPLDEKSLIPTVEMSIAKGRETRKLEQQLEKLTKKLEERKVIEKAKGVLMIENN
                     ITEEEAYNMIRNLSMDKRCPMMEIAETIVMSDD"
     gene            complement(32642..33781)
                     /locus_tag="U0308_000319"
     CDS             complement(32642..33781)
                     /locus_tag="U0308_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEM2315334.1"
                     /translation="MQKVSFKTDLYIGQGATDRLLDFKDKQIFIVTDPFMVSSGMINA
                     ITEKIDPSNTYTIFSEIIPDPPIENVVAGIEVLNECDANLMIAIGGGSAIDAAKAMKF
                     FGQKLGTVRAMPFIVIPTTSGTGSEVTSFSVITNKEKAIKYPLITDAILPDEAILDAD
                     LVKSVPPAITADTGMDVLTHALEAYVSTKANDYSDAMAEKVIQLVFTYLERAYKDGND
                     LEAREKMHNASCLAGMAFNITSLGLNHGIAHTAGAKFKIPHGRMNTLLLPHVISYNAG
                     ITSDFGNNPDNRAAERYTAIAKLLKMPASNTRLGVRSLINAIKQLQKKLNMPTTLTEC
                     GISRTDLNENIAQIAEGALNDGCTATNPRIPTETDVSAILEKMLA"
     regulatory      complement(34199..34342)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            complement(34371..35246)
                     /locus_tag="U0308_000320"
     CDS             complement(34371..35246)
                     /locus_tag="U0308_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization protein"
                     /protein_id="HEM2315335.1"
                     /translation="MVIKARCPASCGELLQGWILGGEKLISYPINWYSEVTLSDKVGL
                     NNSGHTKAWLAFQTTCEYFGVAKRDLPQVSLQVKSTIPVAKGMASSTADIAATIGATA
                     KWLNKSISEAEIAKLCLQLEPTDSTIFESLTLFDHLRGDIIQSSNWMPKLGVVVLEPL
                     TILETATYRQENHQAQLLKNEGHLAKGMDYFQQAVTQKSIHLLGKAASVSAACNQTIL
                     PKPFWREIVEVTENLDLVGLNVSHSGTVVGILYELEKTDPLEILFELERRYVTTFYSR
                     YYFREFVSGGVQIIS"
     gene            complement(35236..36321)
                     /locus_tag="U0308_000321"
     CDS             complement(35236..36321)
                     /locus_tag="U0308_000321"
                     /EC_number="4.1.1.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-phosphate decarboxylase"
                     /protein_id="HEM2315336.1"
                     /translation="MKITTASHGGNYNELAKQHGLTKEMVLDFSANINPLGVPASLKQ
                     TITTNLDKLVEYPEPDYLALRARIASFHQLDLANVIPGNGATELIFGIAKVTKAQKVL
                     LLAPTFAEYERAFFDAEIVYAELTKETNFAAAQIVLEMLEQDTDIEAVCLCNPNNPTG
                     QLIAQQEMIKIADLCEKRNIYLIIDEAFMDFLEENETISMINYLEKFPHLAIIRAFTK
                     FFAIPGLRLGYLLTKNDLLAEALMQMREPWSINTFADLAGQMLLEDEAYIRQTFDWIN
                     AERDFLYRGLSKFSALTVYRPSVNYIFFHLEKPFDLRKKLLLKGIFIRSCANYRGLTE
                     NYYRVAVKSREDNRQLLTALEVIFSGN"
     gene            complement(36335..37528)
                     /locus_tag="U0308_000322"
     CDS             complement(36335..37528)
                     /locus_tag="U0308_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEM2315337.1"
                     /translation="MHKIMAINAGSSSLKFQIFTMPGEEVLVKGLIERIGLPDAIFNM
                     SFQNEKIKEIRAINNHGEAVEILLEQLKAHQVINDLSEITGVGHRVAHGGEDFVTSCV
                     VTDEVVKGIEAVTNLAPLHNPANIIGIKTFRELLPNAVSVAVFDTAFHQTIPEENFLY
                     ALPYELYEKHHIRKYGFHGTSHKYVAGKAAEVLEKPLEKLKIISCHLGNGASVCAIEA
                     GKSVNTSMGFTPNAGLMMGTRSGTIDATIIPYLVDELGYSLDEVMHMMSSESGVLGVS
                     GISSDFRDIEIAAKEGNSRALLTLRMFTGQICNYIGAYASAMNGCDALLFTAGVGENS
                     PLIRQMVTEQLSYLGVTCHVTKNNAGDMIISNDDEAVKVCIIPTNEELMIARDVEKYA
                     KQTIS"
     gene            complement(37594..38298)
                     /locus_tag="U0308_000323"
     CDS             complement(37594..38298)
                     /locus_tag="U0308_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HEM2315338.1"
                     /translation="MSAYLAEFIGTMVLIMFGNGLLAGLTLNKSLSQGANWVVVTFGW
                     GFAVMIGIYVAGAYSGAHLNPAVTIALAVGGSFPWADVVPYIIAQIAGAFVGASIVIL
                     HYYPHFKATPPEIDTHGIFSTGPAIRNTPFNLISEIIATFAFIFGLLMIGANSFTDGL
                     NPLILGFLVVAIGMSFGPTTGYAINPARDLGPRLAYFLLPVPNKSGSDWRYAWIPIVG
                     PIIGGLLAIGLFNILL"
     gene            complement(38326..39444)
                     /locus_tag="U0308_000324"
     CDS             complement(38326..39444)
                     /locus_tag="U0308_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEM2315339.1"
                     /translation="MNSFQIKTKVAFGTNSLQVLKEIKNKNVWIICDRFLADGEGLQG
                     LIGQLDTSNNVHIFTDVVPDPPISKVAGGVSEAGKIQPQVMIAFGGGSAIDTAKGIYY
                     FAKRLEKINISTFIAIPTTSGTGSEVTAATVITDPTTKIKYPLFLDELIPDMAILDAQ
                     LVVTVPPAITANTGMDVLTHAIEAYVSKDASDYTDALGEKSVQLTLRFLTSCYDDGRN
                     LANREKMHNASTMAGMAFNCANLGLNHSIAHQLGAQFHVPHGLANAILLDAVIRFNAF
                     KNRETEQKYAEMARICGIASRSDSNETAVRLLRERIVAMMEHMQMPRTLTDAGVAKEK
                     VYAKMDEIATNALKDACLPTSPTTPSHQELKEILEQII"
     gene            complement(39460..40869)
                     /locus_tag="U0308_000325"
     CDS             complement(39460..40869)
                     /locus_tag="U0308_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase EutE"
                     /protein_id="HEM2315340.1"
                     /translation="MESLELEQLVKKVLLEKLAEQKDAPVKTTVKGAKSGVFDTVDEA
                     VQAAVIAQNNYKEKSLEERRNVVKAIREALYPEIESIAARAVAETGMGNVADKILKNT
                     LAIEKTPGVEDLYTEVATGDNGMTLYELSPYGVIGAVAPSTNPTETLICNTIGMLAAG
                     NAVFYSPHPGAKNISLWLIEKLNTIVRESCGIDNLVVTVEKPSIQAAQEMMNHPKVPL
                     LVITGGPGVVLQAMQSGKKVIGAGAGNPPSIVDETANIEKAAADIVDGASFDHNILCI
                     AEKSIVAVDSIADFLMFQMEKNGALHVTNPSDIQKLEKVAVTDKGVTNKKLVGKSASE
                     ILKEAGIVCDFSPRLIIVETEKTHPFATVELLMPIVPVVRVPNFDEALDVAIELEQGL
                     HHTATMHSQNISRLNKAARDMQTSIFVKNGPSFAGLGFRGEGSTTFTIATPTGEGTTT
                     ARHFARRRRCVLTDGFSIR"
     gene            complement(40876..41871)
                     /locus_tag="U0308_000326"
     CDS             complement(40876..41871)
                     /locus_tag="U0308_000326"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEM2315341.1"
                     /translation="MSIYTKTGDKGTTALFDGNRVKKYDDRVETYGSFDELNAEISVA
                     EKFVTSAENKTLLRNVERQLFYVCAELATEHEASLASKIIITENDINQLEKVIDDYTA
                     KLPKVDSFVLPGSSTAGAFLHSARTVARRGERLLVRLSEQTAIRKELLKFVNRLSDFL
                     YILAREEDFRQMLDKATKLIVAKYLEQTGQEKSVTSDLSFSFCEKLMHQVCIVSEEIG
                     VPVTLAIVDAHGNARFNYRMEHALLVSAELATKKAYSAVAMKTSTEKLTEAVQPGAPL
                     YQLETLTNGDIVTFGGGVPIYGKDGAIIGGMGISGGSVEEDIHIAKKALSMIEKG"
     gene            complement(41886..42149)
                     /locus_tag="U0308_000327"
     CDS             complement(41886..42149)
                     /locus_tag="U0308_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EutN/CcmL family microcompartment protein"
                     /protein_id="HEM2315342.1"
                     /translation="MFMAKITGSVVSTKKEDSLTGKKLMIVQPVDANGEHVRSEEVAC
                     DSVGAGIGEYVLVARGNAARSVFAEPNSAIDSAIIAIVDSFDK"
     gene            complement(42154..42633)
                     /gene="pduM"
                     /locus_tag="U0308_000328"
     CDS             complement(42154..42633)
                     /gene="pduM"
                     /locus_tag="U0308_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PduM family microcompartment protein"
                     /protein_id="HEM2315343.1"
                     /translation="MIEKLVKIIVQRLKLRATNKTSIAISKLPRDPVAIFIESGTIRL
                     TQVNKHFLERILSGNRAESLTAWFEKATDYGVTIELELYDNGEPWLDYTMLSQLEFPV
                     FTNKGERLFHSNGQVICYGDSAVIPSGSTLCKYKKQLITPLANEYLTKNNIAVRERQ"
     gene            complement(42630..43469)
                     /gene="eutJ"
                     /locus_tag="U0308_000329"
     CDS             complement(42630..43469)
                     /gene="eutJ"
                     /locus_tag="U0308_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutJ"
                     /protein_id="HEM2315344.1"
                     /translation="MDILQTANERMEQLAALMNKDIKQKVSADQKVKVGVDLGTSSIV
                     FVVLDEHDVPLFGAFEFADAVRDGLVVNYRESVEVVTRLKERAEKCLGITLTHASGAI
                     PPGTVGNNKKVVANVIESAGMEALYTIDEPTAAAAVLGLQDGAVVDVGGGTTGISVFE
                     NGEVIYTADEPTGGTHMTLVLAGYYGVPVEKAEQNKREQKDSSEHFSVMRPVVEKMAE
                     ITRVHLEKSPSEPLYIVGGASAYSQFKDTFESYLKTPVFQPNYPQYVTPLGIAMSSGS
                     ENL"
     gene            complement(43490..44125)
                     /gene="pduL"
                     /locus_tag="U0308_000330"
     CDS             complement(43490..44125)
                     /gene="pduL"
                     /locus_tag="U0308_000330"
                     /EC_number="2.3.1.222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate propanoyltransferase"
                     /protein_id="HEM2315345.1"
                     /translation="MEREELKAIIKQIVTDKLSGVETEIPIGVSNRHIHLTENDYNQL
                     FPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARML
                     GMKIPIRVSGDIDGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVAHEYGVKQGDEV
                     SVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTCFAKIIKS"
     gene            complement(44129..44404)
                     /gene="pduA"
                     /locus_tag="U0308_000331"
     CDS             complement(44129..44404)
                     /gene="pduA"
                     /locus_tag="U0308_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduA"
                     /protein_id="HEM2315346.1"
                     /translation="MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTV
                     MVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPHNDVETLLPKGL"
     gene            complement(44429..44866)
                     /locus_tag="U0308_000332"
     CDS             complement(44429..44866)
                     /locus_tag="U0308_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
                     /protein_id="HEM2315347.1"
                     /translation="MHQAIGMIEIKGLASAITVADTMAKVANIQLVDTEKAKGFGWIT
                     VKVEGDVAAVNAALEAGEQTAIASDSFIAKKVIPRPGEEIFTVFWPKEEIEPEQPEVM
                     VETEKVEETEVPAEATCNLCHDPLCPRVKGDPRQDCIHFEEEK"
     gene            complement(44879..45226)
                     /locus_tag="U0308_000333"
     CDS             complement(44879..45226)
                     /locus_tag="U0308_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol dehydratase reactivase beta/small
                     subunit family protein"
                     /protein_id="HEM2315348.1"
                     /translation="MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMSL
                     KDEVQAAFRASASSPLLVGVTLKNDHLVIHYRNLPPDKPLFSAYRFCATTLENQRNMG
                     MNAARLVKGVPFK"
     gene            complement(45223..47043)
                     /locus_tag="U0308_000334"
     CDS             complement(45223..47043)
                     /locus_tag="U0308_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diol dehydratase reactivase subunit alpha"
                     /protein_id="HEM2315349.1"
                     /translation="MKYIAGIDIGNSTTEVALAMANSSKEAAFVASAITDTTGIKGTK
                     QNLHGIFKALRLALEKVNATTENLAEIRINEATPVIGDVAMETITETIITESTMIGHN
                     PKTPGGLGMGSGVTVLLDDVTSKSKDEDYIVIIPKTVDFEDAAKQINTYVENGYQITA
                     AILQADDGVLVHNRLNHKIPIVDEVGFIDKVPVDMLAAVEVAAPGKVIETISNPYGIA
                     TVFHLNSDETKNIIPVARALIGNRSAVVIKTPEGDVKARTIPAGHIELQSGSRTQRVN
                     VAEGSEKIMQAIMSLPKLDNASGEPGTNIGGMLEKVRQTMAGLTDKLPADIFIQDLLA
                     VDTFVPVDVQGGLAGEFSMEQAVGIASMVKSDHLQMAAIASEIEQELQVSVKIGGAEA
                     EAAILGALTTPGTNTPLAILDLGAGSTDASIINGKGEIIATHLAGAGDMVTMIIQSEI
                     GLEDRYLAEDIKKYPLAKVESIFHIRHEDGTVQFFDTPLSPTVFAKVVIVKQDGFVPI
                     PGDVSIEKIKLIRRSAKERVFVTNTIRALKYVSPTGNIRDIPFVVIVGGSALDFEIPQ
                     LITDALSHYSLVAGRGNIRGKEGPRNAVATGLILAGGAKA"
     gene            complement(47089..47601)
                     /locus_tag="U0308_000335"
     CDS             complement(47089..47601)
                     /locus_tag="U0308_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diol dehydratase small subunit"
                     /protein_id="HEM2315350.1"
                     /translation="MNQEALENMVRNILQEVNSGAVSTTTSQKVSGDTLTVRDYPLGT
                     KRPELVKTSTSKSLDDITLKSVLDGTIKPEDVRVTAETLKMQAQVARDAGRATLANNF
                     ERAAELTIVPDERILEIYNAMRPYRSSREELLAIADELESVYHATICSNYVREAAQLY
                     QERKKLKGDN"
     gene            complement(47618..48277)
                     /locus_tag="U0308_000336"
     CDS             complement(47618..48277)
                     /locus_tag="U0308_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol/glycerol family dehydratase medium
                     subunit"
                     /protein_id="HEM2315351.1"
                     /translation="MVEINEKVLRGIISEVLDELQLKEDKVSFQKEQPSVAVSDESFL
                     TEVGDAEPGRQKDEVVIAVAPAFGKYQTKNIVGVPHKQILREVIAGIEEEGLKARVVR
                     VFRSSDVAFVAVEGDKLSGSGICIGIQSRGTALIHQKDLQPLSNLELFPQAPLITLET
                     YRAIGKNAAKYAKGESPNPVPMVNDQMARPKFQAKAALLHIKETKHVVQGKNAVELQV
                     N"
     gene            complement(48315..49979)
                     /locus_tag="U0308_000337"
     CDS             complement(48315..49979)
                     /locus_tag="U0308_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol/glycerol family dehydratase large
                     subunit"
                     /protein_id="HEM2315352.1"
                     /translation="MKSKRFEELAKRPVNQDGFVKEWIEEGLIAMESPNDPKPSIKIE
                     NGKVVEMDSKKLADFDLIDHFIAKYGVDLSRAEEVMQMDSVKLANMLCDPNVPREKIV
                     LLTTAMTPAKIVEVVSQMNVVEMMMSMQKMRSRRTPTTQAHVTNLRDNPVQIAADAAE
                     AAIRGFDEQETTVAVVRYAPFNALSLLVGSQTGRGGVLTQCSLEEATELELGMRGLTC
                     YAETISVYGTEPVFTDGDDTPWSKGILASAYASRGLKMRFTSGTGSEVQMGYAEGKSM
                     LYLESRCIFITKAAGVQGLQNGSISCIGIPGAVPSGIRAVLAENLIAVMLDLEVASGN
                     DQTFSHSDIRRTARLLMQFLPGTDYISSGYSATPNYDNMFAGSNFDADDFDDYNILQR
                     DLKVDGGLTPVTEEEVVAVRNKAARVIQAVFDKLGLPEVTDAEVEAATYARGSKDMPE
                     RNMVEDIKAAAEMMDRGVTGLDVVKALSAGGFDDVAESVLNMLKQRVSGDFLHTSAII
                     DKDWNVISSVNDLNDYAGPGTGYRLEGERWEKLKDIAVAVDANELE"
     gene            complement(49998..50801)
                     /gene="pduB"
                     /locus_tag="U0308_000338"
     CDS             complement(49998..50801)
                     /gene="pduB"
                     /locus_tag="U0308_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003746999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduB"
                     /protein_id="HEM2315353.1"
                     /translation="MSEQNKLIDEILKQVMETVNDAPEKLVEDGGSRQMSEKAVQLTE
                     FVGRAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATN
                     TEVVKIELPRDTKGGAGHGSLIIFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAGHI
                     ELQYTARASHALNTAFGAPVGKAFGLMVGAPAGIGVVMADTAVKSANVDVVAYSSPAD
                     GTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI"
     gene            complement(50794..51081)
                     /gene="pduA"
                     /locus_tag="U0308_000339"
     CDS             complement(50794..51081)
                     /gene="pduA"
                     /locus_tag="U0308_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduA"
                     /protein_id="HEM2315354.1"
                     /translation="MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTV
                     MVRGDVGAVKAATEAGAAAARNVGTVMSTHVIPRPHTDVEEILPVRVKSDE"
     gene            51384..52268
                     /locus_tag="U0308_000340"
     CDS             51384..52268
                     /locus_tag="U0308_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PocR ligand-binding domain-containing protein"
                     /protein_id="HEM2315355.1"
                     /translation="MLLQSKSNEMLIEKVMDEFSAATSLASVVVDIHGTEVSRLCNFT
                     PFCQLIRSNPKYRSLCQKCDMFGGLEASKTGKPLIYRCHAGLTDFSVPIVVENQLSGF
                     LLSGQVICEESSEVGNIQAEETDWKNDKELISAFRSVPVFSSKKINSSAEMLTIISQY
                     YLKSEMEKSREEQKQKIVFHHAKIAHHEENKEIRKALKYIEKNLNRPITLDEVASHVY
                     LSSYYFSKLFKKEMNVNFINYVNQKKMSLAKEMLKNPRLSIDNIARNLGFTQTSYFCK
                     VFRKEFEVTPKGYRETLK"
     regulatory      complement(52422..52612)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            complement(52678..53253)
                     /gene="cobC"
                     /locus_tag="U0308_000341"
     CDS             complement(52678..53253)
                     /gene="cobC"
                     /locus_tag="U0308_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ribazole phosphatase"
                     /protein_id="HEM2315356.1"
                     /translation="MQLIFVRHGETDWNVAKKYCGQLDVALNENGIRQMEQLREKLEN
                     YSIDLVVTSDLMRVKQSANILSNAKTLRFPALNEMNFGDFEGYTYQEISTKFPKAWNE
                     YCNNWQTALFSNGESFPIFYERVVAILEEEMEKWQQLDTVLLVGHLGVLRVIALFLQK
                     QTIAQYWDIDFKQGCYSLWDNKSQHFLISNQ"
     gene            complement(53254..54000)
                     /gene="cobS"
                     /locus_tag="U0308_000342"
     CDS             complement(53254..54000)
                     /gene="cobS"
                     /locus_tag="U0308_000342"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HEM2315357.1"
                     /translation="MKTLILLIQFFTRIPLPVQINMDEINLKKGSALLPFVGVIIGAW
                     NWLIFTLVALLMPLPVAIIAGLFAEIIITGGFHVDALADTADGLFSSRKRERMLEIMK
                     DSRVGANGVIAICFYFLFYGSLFLSVPDTQQIGWLFFVLPIVAKGVTMLLFAKMTYAG
                     SKEGLGSIFLGVPWWPVVIAQVIVLVALGAFFSYIGVIAYAGVILFTIIYRAFVYKRI
                     GGMNGDTLGAGGQMGQLICLFCLVLLWGLI"
     gene            complement(54002..54559)
                     /gene="cobU"
                     /locus_tag="U0308_000343"
     CDS             complement(54002..54559)
                     /gene="cobU"
                     /locus_tag="U0308_000343"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HEM2315358.1"
                     /translation="MSEMMLVTGGARSGKSSFAEKEATKYNRVLYVATGIAFQNDTEF
                     QARIKKHQATRPEHWDTFEAFKGIAAYLERNGNKYDVIMLDCVTMLVTNLFFSLLGER
                     ELTNEIADEVEAGIQSEVRAILKAGEQSSAKFIFVTNEIGLGVVPENKLTRVFRDIIG
                     RINQQIATEVEEVYFVVSGIPKRWK"
     gene            complement(54552..55295)
                     /locus_tag="U0308_000344"
     CDS             complement(54552..55295)
                     /locus_tag="U0308_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HEM2315359.1"
                     /translation="MPQVRDLSVIDVPGGCVLTSCDISAGFGEKVHDGLRVAPEVTAR
                     LTLRVALLEMLASGAVVVAVSDVIGAEMEPTGKRVIAGLKDELIKADLGHIELNGSTE
                     ENMNVTQTSVGVLVTGFATKAALKLINVHEAAVLFAFGEPIVGAEVLQRMAEMPDYHL
                     VKKLVEHSDVLEVVPVGSKGMAYEANTLARLNDCTFKASDVFNEATMNKTAGPASVIL
                     VAVKASEVKAFEQNFPAAKCLGELRNYHE"
     gene            complement(55320..55751)
                     /locus_tag="U0308_000345"
     CDS             complement(55320..55751)
                     /locus_tag="U0308_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EutP/PduV family microcompartment system
                     protein"
                     /protein_id="HEM2315360.1"
                     /translation="MKKMMVMGSVGCGKTTLCQKLHGYDILYKKTQAVEYFQEMIDTP
                     GEFVQHRQLYSALTVTAADASVIAILQSVTEKKQTFSPMFASIFAKPVIGIVTKVDLA
                     ESEKDIERAERELRMAGAKHIFYISSLEETGIEELRAYLED"
     gene            complement(55757..56107)
                     /gene="eutS"
                     /locus_tag="U0308_000346"
     CDS             complement(55757..56107)
                     /gene="eutS"
                     /locus_tag="U0308_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutS"
                     /protein_id="HEM2315361.1"
                     /translation="MSFDDNKERVIQEYVPGKQVTLAHLIANPNRDIYTKLGLEEGAS
                     AIGILTITPSEASIIASDIATKSGDVRIGFIDRFSGSVVLTGDVSSVESALQQVVYSL
                     HEILDFSIPKITRS"
     gene            complement(56255..56809)
                     /locus_tag="U0308_000347"
     CDS             complement(56255..56809)
                     /locus_tag="U0308_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
                     /protein_id="HEM2315362.1"
                     /translation="MKMDTLGFLELNSISKGIEAVDTMLKAANSELIYAKASCPGKYY
                     ILIAGTVDSVAQSIEAGTKIGAANIVGNLVIPRVSDQVIKAINKTEVPDEMNAVGVME
                     YYSCSGSIIAADAAVKAADVQLMDIRLATGIAGKSFVVLTGDTAACEAAVEAGLAAAK
                     EEALLINKVVIPRPRKEVFESLIY"
     gene            complement(56806..58170)
                     /locus_tag="U0308_000348"
     CDS             complement(56806..58170)
                     /locus_tag="U0308_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HEM2315363.1"
                     /translation="MSQMSILEKIKDAGVVGCGGAGFPTHAKFSGEVEYLIINAAECE
                     PLLKTDHFVMRNHAVETIKAIEMVKSQVGAEFAVIATKRYYTEEIAALRSAITELDAS
                     VTIHEMDNVYPTGDEQVMVFEVTGRVVPPSGIPLMVGCIVSNVSTMWNVFHAIQDDAP
                     VVRKQLTVTGAVGEPKLLDVPVGTPFEVCLAAAGGTNLDEYLFLDGGPMMGKLNDKST
                     IAEKVVTKTTSGLIVAEDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRKQLGH
                     DIHPHKVMRHFAVAEDITDIKPDPIWEEAMICCECGICEVIACPMGLSPRQVNIHVKK
                     ELLKQGVRYQTDKKEFTPDPMREYKSIAPKNILIKMGLQQYADVHLETMHYLDVDEVF
                     IPTKMHIGAPSIPVVSEGDIVKKGDLIAKIPDASLGANIHASIDGQIIRITEEQVHIK
                     KVMS"
     gene            complement(58289..58768)
                     /locus_tag="U0308_000349"
     CDS             complement(58289..58768)
                     /locus_tag="U0308_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional precorrin-2
                     dehydrogenase/sirohydrochlorin ferrochelatase"
                     /protein_id="HEM2315364.1"
                     /translation="MKYPIMLDITGKRVVIIGGGKVALRKVKGLLHTGADILIVGLDV
                     LPEIKELQVQVKEEAYRAEHLIGAFLIFICTNNPEVNQMVLKDRLPEQLVNDTTEQKN
                     SDFFNMATVSKNELLVGISTGGGNPGYAKKVKREVRQLVENLETEEIGKRNKNDKTC"
     gene            58860..59267
                     /locus_tag="U0308_000350"
     CDS             58860..59267
                     /locus_tag="U0308_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2315365.1"
                     /translation="MFNQAKRISTFFTFNGNGEEAFNFYLDTFPDAKKIGLTYFTKPE
                     QGGDIGKVLNATFEIKGASFMIMDMTNNASPDFSWATTTLYFADTEDEFDTLFEKLAK
                     EGTVMMGPEAVEALRKVAWVTDKYGITWQLAFV"
     gene            59398..59970
                     /locus_tag="U0308_000351"
     CDS             59398..59970
                     /locus_tag="U0308_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEM2315366.1"
                     /translation="MAENTKNENITNILTQKLIDTRTVLIYGEINQELAEDVSKQLLL
                     LESISNDPITIFINSQGGHVEAGDTIHDMIKFIKPTVKVVGTGWVASAGITIYLAAEK
                     ENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKEIIRMRERINRLIAEATGQSYEKISK
                     DTDRNFWLSVNEAKDYGIVNEIIENRDGLK"
     gene            60035..60382
                     /locus_tag="U0308_000352"
     CDS             60035..60382
                     /locus_tag="U0308_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315367.1"
                     /translation="MKLTKENFQKLDQIHLSLENRHSMSEIIAILSESYIEITQNGVV
                     KDFSYYKSLTTLGNSSLEIMDYDIKILDETKVLSYYKLKNTSENSYTMRSNVWIIENG
                     SWKLTFHQGTKIV"
     gene            complement(60417..61952)
                     /locus_tag="U0308_000353"
     CDS             complement(60417..61952)
                     /locus_tag="U0308_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="internalin N-terminal domain-containing protein"
                     /protein_id="HEM2315368.1"
                     /translation="MKKTIKITTSLLLSFACVFSIGDFTKPHTVEAETVYSLTDSKPI
                     NEIFPDPKLAQVVANWLKLPSATSPVTQNQLNTVKSLHFDSKGVQSLEGVEYLKNLTQ
                     VFGYGNQVSDLGPLSNLTQLEIIQMPRNQISDLTPIANLTALMSLDFEFNNLQTIEPI
                     KNLTNMLELNVSANPISDISAVKNMTQLEFLTIRDCEVSDLSPVENLSNMLMFWAGRN
                     NISDITPLKNMSKLLGLSLFGNQIKDVSVIKNLTSLEDFDIKANQVSDISSLATSTTL
                     ETLTLSFNQIIDISSLKNLTNLTRLELANQTRVLDAVEVDDPLILPAPVIDENGSRVQ
                     PTKVSHAGIYANGEITWEGLQSNYILNYEYNLPVAIGSLTTTYSGKITQPLLEKPVNP
                     ITPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVTPVNPSNQVNPI
                     DPVKSVLQVTETLMKQTTSVNTIVAKDNRNLPKTGDSGMHSSLVSGLMLAVSSVILLR
                     KRK"
BASE COUNT        17384 a        13643 c        10997 g        19962 t
ORIGIN      
        1 aagaatctta tttaatacag ctattttttc attgtcggtt cgtcttacct ctgtttcttc
       61 tcgtttccag acaatgcgat ctgtttcaaa ataatcgatt tgttgccact cggaaagctt
      121 ttttgctaga gtggttttgc cgcttccgac ggatccgata atacgaattt tcataaaaaa
      181 acctcgcttt aaattaatta ctatcttttt accccgcttt tattttataa ttatctcatt
      241 gtgataaaag ggagggaaat ttttgattat attatttatt gtatcaggtt tgttagctgg
      301 gatggtatta ccagttcaaa cggccatcaa tacgcgactt agtacatata cgaaatcacc
      361 gtttttagct tcgtgggttt cttttatggt agggacaact gttttactta tcgtttgttt
      421 atttacacaa aaatcatggc caatatcttc agaaatgatt gcctcaaatc cttggtatat
      481 ctgggttggt ggtggaacat taggcgttat tttcttaacg gccaatattt tacttttacc
      541 tcgacttggt tcggcacttc ttgtgatgat tacggtttgt ggacaaatga ttatggcgat
      601 tattattgat aactttggtt tatttcaagt accaatgcat gagattaata tcgaacgtct
      661 acttggcgtt atcttaatgt tcggcggcat ttacttgatg caacgctttt aaaaggagga
      721 gaaaacatga caaaaagatc atccaaatca ttattactat ttatggcaat gggacttgtt
      781 tctggactac tttccccgat tcaaacgtcg attaatagcc aacttcggct cactgtcggt
      841 tctccttttg tggcatcatt tatttccttt ttagttggga caacgttact tacgcttgtt
      901 tgtttaattg tcgagcgtcg tttgactttt caactgaaag gtgtcggccg aattccttgg
      961 tgggttttca ctggcggtgc gcttggagtg ctcttcgtaa cttctaacat tttactttta
     1021 ccattactcg gctcagcaat gacggttgtt ttagcgcttt gtgggcaaat gattattgca
     1081 cttattattg atcattttgg ttttttcggg gttattcctc atccaattaa ccgttatcgt
     1141 atgattggtg ttttattaat gcttgttggt gtatttttaa ttcaacgttt ttaaaaaagg
     1201 aaaacctctc cggctttgat gtctggagag gttttttatt atttcttttt attgcggaaa
     1261 acgagttcgg aatttttgta aaaaatgtct gtttcaccag cgcggtaatt gacgactctg
     1321 gcaacggcaa aaaagtaatc cgataaacgg ttgacgtatt ttaatacttc ttcgttactt
     1381 gaagcaattt ttaacatacc gacgatttcg cgttcagctc ttcttgttac ggttctagcc
     1441 atgtgcagta atgaggctgc ttgcgttcca cctggtagga taaatttttc tatttctggg
     1501 ggttcatcgg cgtagatgtc aattcggtct tctagccacg caacaggctc acttgttaat
     1561 ttatacgcac gcttgccttc ttcggttgca agatcccctc ctgcatcaaa taattgctgt
     1621 tgaatttgtt cgagttcggc ttgaatttct ggttcagccc caagtgttgt tatcgtgtag
     1681 ccaatcagcg aattaagttc atccaaagtt ccatatgcat cgatacggat attatcttta
     1741 cttactttgc tacccccgat aattcttgtc attcctttat cgccggtttt tgtgtagata
     1801 cgcatatttt ttctcctttc atgatttttt ctagttggtc catttgaata tttgcttcta
     1861 aaagggccgc tagtttgtcg tattcttgtt ctttgtgttc tttcagatta atgatttcat
     1921 gcggataaac ggatttgttt ttacctgtta gtagttcgtc aaatagattt cctaagaaaa
     1981 catcattgtc gaaaatacca tgaatatatg tgccgatgat atttttgttg acagagatag
     2041 cgccatcttg gtgggtttct tcgtttccgt tcaccgcttt aatttcgcaa aatggactag
     2101 tgctctcgcc tcgcttcgtc tcacccatat ggatttcgta accttcaact gcttcacctg
     2161 aatgcgtcac acctgtaatt tgagtagtgc gtttttggtc gagaaaaatg gtctcggtat
     2221 ctagcaaacc aagtccggct atttctaatt gtttactctc cacttgattc ggatcgagca
     2281 tttttttacc gagcatttgg tagccaccac aaatcccgat tacttttccg gcatttttag
     2341 catagttttg aatggcattt ttaagtccag attcttcgag gaaagccata tcttctagtg
     2401 tatttttact tccaggaata atgactaaat ctgggtttcc aaaatcagct atattacgga
     2461 tgtagcgtac acttatgtcg ggctggattt ccagaatatg aaaatctgtg aaattagaaa
     2521 tcctcggtaa acaaataatc gcgatatcaa gtagtgcgtt actatccggc acgtaatttt
     2581 tcccacttag agaaacgctg tcctcttctt ccagttgtag attggcataa ggaatcacac
     2641 cgataaccgg gacatttgtg agttcctcaa tcatatcaat tccgggttgt aaaagagcta
     2701 catcgccacg gaatttattg ataataacac ctttgattcg agcccgctct tcttcattta
     2761 acagcataat ggtgccgtat atcgaagcaa aaacgccacc tttgtcaata tcagcaacta
     2821 agacaactgg ggcatcgacc atttttgcca tgcccatatt cacgatatct cggtcgttta
     2881 agttgatttc ggctgggctt ccagcacctt ctagtacaat aatatcattt tcatctgcta
     2941 aactctggta aactgcctgg attttcggga taagggtttg tttgaaatcg tggtacgtca
     3001 cagcatccat attatctaaa attgcaccca taaaaaccac ttgcgactgc ctgtcattgg
     3061 tcggtttaag taacacggga ttcatccgga catctggaaa aacaccagct gcttctgctt
     3121 gaaaaacttg tgcgcgtccc atttcatctc ctgtcgccgt tatgaaagaa ttgagtgaca
     3181 tattttgaga tttaaatgga acaactcgct ttcctttatt tttgaatagg cggcataggc
     3241 ctgcaaccag tacacttttc ccggcatcag aagcggtacc ttgaatcatt atttgcttta
     3301 ccattaatta gtcaccttcc ccgtatgcgc gaaaaaatcg gcttcttttt tgaacagtgg
     3361 atagccagct tgttgatgca atttgatgag ccaaggctgt actaatcccg cttgttcgac
     3421 attacttttc tctaagaaaa cgttgctcgt ttccccgtct gtcaaaacgc ttccgtcctt
     3481 cagcatatag acataatcac aaatttcata aattaaatcg atatcatgac tggaaataag
     3541 tattttcttt ccttggcttg caagacgttc gatgatttcc atcatgattt ttttgccaat
     3601 cggatcaaga ccagcagttg gttcatctaa aagtaaccaa tctgtatcaa gaacaagggc
     3661 acccgcaatt gcgacacgtt ttttttgacc gtagcttaaa tactggactg gtttatgctg
     3721 aaagtccttt gccccaacaa tgtctaatac tttcgtcact cgtgcctcta cttccgtttc
     3781 gctaacacct aggtttctaa gtgcaaaggc tacatcatca cgaacattcg aataaaaaat
     3841 ttgttggtcg ggatcttgga aaacgatgct tacttttttt cgtaaagcaa ataatgcttt
     3901 tttcgtatac gcgagtggtt ttccttcaaa ataaacggtg ccatcgctcg gtttgttaat
     3961 accaagtaac tgcataaaaa gcgtcgattt accggagcca ttcgcaccaa taagtccgat
     4021 aatattgcct ttttctaaat caattgaaac atccgttaag gcttgtttgc catcttcgta
     4081 ttggaatgaa atatgttctg ttttaagcaa attggcttcc tcctagatat gaaattctcc
     4141 ttgatatagc ttcacatcaa gtgttataac catttcatta tatcttttca taacacgatt
     4201 aaataaagta tttacgagca tgccaaatga acgataacta ttttttatgc cgtgataacc
     4261 aaaacgcagg ctctgcgctt ttcgaattgc cgccgcttcc tctaagaaaa taaagataaa
     4321 acggtaaatt aaaatggtca gttcaatcag tacttttgga ataaaaattc gcttcatcac
     4381 ttttgttaat tgtaccacgg gaacggtcaa gacgaaaaag taggttgcgg ctaagcaagc
     4441 gatactccgg aaaaagactt gtgttgccgt cgtaatagtc acgtctgata caccgagata
     4501 caaactccca atcgaaatcg aagcgagaaa actgcttgga tctttagaaa tcgaaatgag
     4561 aatcgaaagt aaactaaaaa gtagaaatga aaatggtaaa aggagccatt tcaaatattg
     4621 tttaaagtga attttaacga catagagcgt caatggtacc atgcagaaga acagtattgc
     4681 ttggatgagc acaggaccag ttaacgcgag tattagaatc gcgacataaa ataatgcttt
     4741 taatgatggc gaaaaagcta tccaccggtt ttgataagca tatttatcaa tggttaacat
     4801 cgttctcagc tttccgcttg ccacgactta caccaatgac atacgcgata attcctgttc
     4861 cgatacaacc ttgaagcgta aataataagc tttcaatttc accacttttt ggttcataaa
     4921 gaggttcaaa ccacggttca tagcttggat cgattttggt gatttccgcc tctgcttccc
     4981 cgtccgagcc gccgtattct cccgttttat tgaagaagaa tggactaacc attaacaata
     5041 ctactaatag aattaaaatg acattgatat ttattttttt catcgtaatt gtgccacctt
     5101 ttctggtaaa tttttgctaa taagattgta catgactacc gttagcaatc cttctgcaat
     5161 cgcaattgga acttgtgtca cacagaaaat cgccatgaac ttcagaatgg atgccatcat
     5221 gccggatgct ggatctggga aaacgactcc gagctggacg ctggtagtta agtaggttgc
     5281 taagtcagct gtcatcgcac ataagaaaat cgaaacactt ttattacagt ttaatttacg
     5341 agcgagtttg tatacgacaa aaccaaccat tggaccgata accgccatcg acattgcgtt
     5401 tgcgccaaga gttgtaatac cgccgtgtgc aagtagtaac gcttggaaaa gtaagacaat
     5461 cacaccaagt acactgacaa cgagcggtcc gaacataaca gttgcaaggc caacaccagt
     5521 cggatgagaa caagatcctg taacggacgg aattttaagc gctgaaagaa caaagataaa
     5581 ggctgcgcat agtgccaaca gtaatttgtt gtttttatct agggcaatta atttacgaat
     5641 acgaattaaa ccaagtacaa ggaatgggat aaatacaatg aaccaaaaga cagcccattt
     5701 aacaggtaaa aagccctcca taatatgcat tgcgtgtgcg gattctgggt tcgttaaagt
     5761 aaaataaata acacctatta aaacaaatgg tagaaacttc cataattttt tcatttatat
     5821 tgctcccttc tttttttcac gataatcgtg gtaaagtatg acattttttc gtctgggttt
     5881 atctcgttca tgccgtatgt gattttttca gtcgccatgg caacatcgct tactactact
     5941 gctgcatcaa gtaaattcag tttttttagt aatgtcgtaa gaaggggtaa attgcttgct
     6001 gctttcatta agacaactgt gtcaaataaa gtgagcgctt gttcgatttt ttcagcacct
     6061 gctgttacag ggatgacagc gaaactttcc tcgtccatta cgagtggtaa ttcaatcttg
     6121 gaggcgatat tggaaaagga cgaaatacct gcgagtgtca ctgtttcaat ctctcctttt
     6181 aataattcga gtaaatagct ataagtgctg taaaccattg gatcgccaag tgtgatgaaa
     6241 ccaacatcat gcccgttttg aacatctgct ttgatttctt cggcgatttc tttccatgca
     6301 agcatttttt cttctttgtt gtaactcatt ggaaaatggc gttctttaat gattaatgta
     6361 tcttttaaat aagggctgac gattttctta gctaaacttt cgccgccttt tttgggttgt
     6421 ggcgtgtaga gaatttctaa atttccgagt ctttctgctg cttccatcgt gactaacttg
     6481 ctatctccag gacctgtacc aatgccgtaa aatttagcca cgtgctttca ccctttctat
     6541 tgccgtgtgg atatgatcga taaattgggc ttgaataagc ggattttcgc ctagaccttg
     6601 caaatgacat tcagtttgaa tgccagcttg ttccagcgtg cttttccaag aatcctcgtc
     6661 atcagaagcc atatcgttcg tagcgtgatc acctgctaca agcataaacg gcattaggtg
     6721 cgcttttttt atatttgctt gttgtaatcg ttcaattact tggtcaagac cagggtaact
     6781 ttctaccgca caaaggtaaa ttggttcgtt taacaacata tggtcaaggc atgcataggc
     6841 gctgaaagca cgatgcttcg aaccatgtcc catgagaatt agcgcttctt gttcttttaa
     6901 aggtggcatt tggtggcgaa tggcttcgat tgctttttcg taatcttcca tcgaatcaag
     6961 taacggttgg ctgacaataa tggaatcgaa atccggcttg aatttttcca cctgtgcagt
     7021 gattttttca aattcaccac cactaataat atgtagcgac tgaataatga cttctttgta
     7081 gcctaattcc tttagttggt ttaatgcttg gcttggtgtg ttaatatgca tattgtcacg
     7141 agtttttagt tttttgatga ttttattgga tgtgaatgca cgaaacacgt tgtaatctgg
     7201 gaactcttgg gccacttttt tttcacaggc ttcaatcgtt ttttctcttg tttcaggata
     7261 acttgtgcca aaactaacga ctaaaatcgc ttttttcatt gtggtactcc ttctaatttt
     7321 gttttttgga ttagttcaat taagctctct ggtgtggcgc tttcggcttc gataaaattg
     7381 ttgataccga atgatgctaa cgttgcgctc gtgaaccttc caatggaaag aattgttttc
     7441 gtttgtaaaa tggctttttc ttcggttgtt agtacgtcga gtaaattttg aacggaacgc
     7501 gaacttgaga aacaaacttg ttcaaagctt gcaaggtcaa atggtcgttc tgtcacagga
     7561 cgcatatcat ataacggcat catttccatc gcttccactt ctgctaaaat tgcgttaact
     7621 tctgccgtat caactatgct tccgataatt aagttgctca catttttctg taaccgtggt
     7681 aaatgctcca aaattaattc cgtgctccgc cttttaatga aactatctgg aataattcct
     7741 ttttcactaa aagcttcttt tgtttgtttg ccaatagcgg taagatgggt attttttaga
     7801 gaacgaatat ctaaatcaag ctgggctaaa taatcaaaaa atcgttctac cgcttctttg
     7861 gatgtgaaaa gaagtccgct tacttctctt agttcttctt ttgttttcgt tggcacaaca
     7921 tctactactt gaatattggg atacattgtt acttctccgc ctaaatcgcg aatttgttcc
     7981 gcgagcatac tttttccagc tcgtgctctt ggaagtaata cttttgtatg gaaaagtggc
     8041 atttcctcaa agaagttaag ctgcggtcgt aagctcacca catcaccaac aacaataagt
     8101 gccggcgaag aaataccaga ttccgctact ttttgttcga tgttttgtaa gttcccggta
     8161 accgttaatt gtttgccgcg agatgcccat tgtacaatcg caacacccgt ttcggctttt
     8221 cgaccatttt ctagtaagtt cgcacaaata ttaggcaaat tagtcattcc catcaggaaa
     8281 acgagcgtac cttccagtct agcaagggct tcccaatcta gtggatcgcg tccttttttc
     8341 aaatgtccgg taatcacgtg aaaactcgaa gcaaaattac gatgtgttac tgggattcca
     8401 gcgtaggcaa gcccaccaat tgcggatgtg attccaggaa taacttcaaa tggaattccc
     8461 gctttataga gtgtctctcc ttcttccccg ccgcgaccaa acacataagg gtctcctgct
     8521 tttagacgaa caaccagctc atttgtcgca gcttctttaa caagaatttg ctcgatttcc
     8581 tcttggggaa ttggatgatg aagtggttct tttccgacat aaatgagttt acaactagct
     8641 tttcgttctt ggagcatcgc tggttcaacg aggcgatcgt atacaataac atctgccttt
     8701 tgcagtgcag ctaagccttt cacggttagc aactgtgcat ctccaggacc tgcaccaatt
     8761 aacatgactt ttcccattag tagacctcca attgagttaa aatttctggt agttcgctta
     8821 aatgatttat ttcgattgga taatttaatt ttttgcgacg aatcacaata actggaatat
     8881 ttaattctgc ggcagctgcg agtttttctt gaaagccacc ttgttttcca ctctctttag
     8941 tgattaatac atctgcccca gtcatttcta gttgagttcg gttcgcttct ttggtgaacg
     9001 gtcctttcat gccaatgatc tggtcggcaa cgagacctag ttcttcggct gaacgaatta
     9061 catcagacac tggtaaaata cgagcgatga tatgtcgatt gtttaaacca gctacgaatt
     9121 ctggtaaatt tttactacca gttgtaagaa agattcgttt cccaagtttc attgcaactg
     9181 cacaagcttc ctcaatatct gctaccaaat aagtattatc tgtttgttca ctagtgcgtt
     9241 caaaacgaat ataaggaatg tccgcttctt tgcatgcctc catcgctgtt tcagaaacaa
     9301 tggtcgcaaa tggatgagtc gcatcaataa cgaggtgaac ttttgtagca tgccatttta
     9361 ggagcatttc ctcttttgat aatctgccac aaaatacgtt ttcggcatgt tgtttcgcta
     9421 aagtttctcc gtaatcggtt gcgacagaga gtataaaggc ttgctttttt tccgttagcc
     9481 agtcgctaat cgccaagcta tccgaagttc ctcctagcac gaaaatcata gtgtgtaacc
     9541 tcgtggtgtg atcattttgc catttttcac gtaggtttct ttgtttccta caatcaccat
     9601 cgttgtcata tccactaact cataatcaat atctcgcatc gttgtaatga tttttcgctc
     9661 ttcttttcga ccaacatctt tcacaatacc aacaactgtg tcccctgatt tatgctccat
     9721 catcttttga aaagcattgg ccaaatgatt ggcgcggcct ttacttctcg gattgtaaaa
     9781 acagacaaca aaatcggcca ttgcagcgtg ggttagacgt ttttcgatta cttcccatgg
     9841 tgtcattaaa tcgcttaaac taatatggca aaaatcgtgc ataattggcg cgccgagaac
     9901 agcagcggct ccaatacttg cggtaattcc tggaatcact ttgacttcta aatctgggtt
     9961 gcttttttct gcgagttcta aaactagacc agccataccg taaattcctg catccccact
    10021 tgaaacaact gctacttttt ttcctgttag tgcaatatca acggcttctt ggcaacgatc
    10081 gatttcgcgg cgcatgcctg ttttcactac ttctttatct ttaattagct ctttgatgag
    10141 tttgatgtac gttacgtaac caacaatcac ctccgcgtct tctattgctt gcagtgcttc
    10201 accggtcatt aatcgtttat ctcctgggcc aattccgatt acataaatca ttttgccacc
    10261 tcactatttt tagttaattt ccctgctgcg aaagtcacgc cattttcagc aaatcggctt
    10321 gtaacaacat ttccgttact accaatgtct gctgacgata gggcgacatt tcctacttga
    10381 acagtttttt gaacaaaagc ggatgttgga tattttccag caactgtttg taattcttct
    10441 gctggatgga caataaatgg gacacgccat ttctccgcta aatgaagaat tgccggttct
    10501 tccgctttta aagtaatact atgaatctca cggaatgccc gcgggtgtat gttttcttgt
    10561 tcacaaaaat gtgtaaatgc tgcagctatc gtttccgctg aaacgccttt tctgcaaccg
    10621 accccgagga taaattgctt aggtaccagc tggatgcgtt catgtgtcgc cacttgtagt
    10681 ttatatttag ttgaaatgta aacttgcggg ctaacttctt ccattgtaaa accgcgtgta
    10741 tctatatcta atggctcatc gatgtacaat ccaacttctt ttcctgctgc aagtaaacca
    10801 ttgatgcgtt tcgttgtcgc tttaaaatct ggtaaataac catttaattg tttggcgata
    10861 ttatcaatgg cagctacatt tgcgcggtct gttgcggttg taattactgc cgcaccacct
    10921 gttatcgcag cgatttgttc ggttagttca tttgccccgc caacatgtcc tgaaagcaag
    10981 ctgataataa atttcccatg ttcatccatg acaagtactg ctggatcaga cagcttgtct
    11041 tctatcgctg gagcaagcgt tcgaaccgca attccagtcg ccataataca aatcaatgct
    11101 tgatattttg tgaaaatttc gcgcatcgct gttccaaaat ccggcgttaa agaatttgtt
    11161 tgctcattgc aatgctttcc tggtacaaaa atcgttgctg ctaccgtttt tgttaacgtt
    11221 attgctaaat cgcgaccacg ttctgtgaca gcaataatcg ccagtttatc tgtattcatg
    11281 tttgaaatcc ttgtcgtata gcttagaata ataaaactct tctccaagga aatcaccgac
    11341 cataataagc gccgttttcg taattccagc ttctgttact ttttctgcga tatcttctaa
    11401 cgtgccggtt actttctttt cttccgccca agtcgctttg taaatgacag ctgctggggt
    11461 ttctggttta taaccgcctt tgattaattc tgaaacgact tttctaatac cttgaacgga
    11521 caagaaaatt accattgaag tttggtgcgc cgcgtatgaa cggagggatt cacgcgatgg
    11581 tactggagtt ctgccagcca ttcgggtaat aattacactc tgacttactt ctggaactgt
    11641 atactccacc ccaaaactgc ttgccgcgcc aaggaatgaa ctcacacccg gtgtacatgt
    11701 gaagggaatc gaacgctttt tcatttcctc gacctgttca cgaatcgaac cataaataga
    11761 aaagtctccg gtttgcaaac gaaccacttc tttaccagca gtcacgcccg cttccatgca
    11821 gtcgatgatt tcgattaaat tcatgcttgc actattatgg atttcgcagt ctggtttaca
    11881 atattctagc aactccgggt ttacgagcga ccctgcataa ataacgacat ccgcctcttt
    11941 taataattga tatcctttta aggtaattaa ctctttatct cctggtcctg ctccgacgaa
    12001 atgtacttct gccattttct tcactcctct agttttttac agccaataat gacggttgga
    12061 ttttgtggtt caaaataatg acctgctcca agtttatgcc aactcgaaac ttggatttgt
    12121 ttcatcgtta attcactcac tgttaatttt tccaaatggt tcattgcagt taacgcattt
    12181 tcaagcaaaa taaaattaag taccaaaccg cctcccgggt tcaaatgtgc caacgaccag
    12241 tcgataatat cggttaaatt gccaccactt ccaccaataa aaatagcatc aaatgtttcc
    12301 ttttcaggca attcaattgg cgcgtatgct tcgataactg ttacattttc taatccaaat
    12361 ttcgcttgat tttgtttaat taaatccact gcatctgggt ttcgttcaat cgcagtaact
    12421 tggattttcg ggaaattaca agcaacttga agaccaacgc tcccagtccc cgctccaaca
    12481 tctagtaatt tctttgacgt atcatctaag ttaagtaaat caatgcttgc cgctcgcact
    12541 tctgcttttg tcatcggtac tttaccacga ataaaaacct catccttcat ctacaatcac
    12601 cactacattc atatcgtatt tttttgctac ttgttctggt ttcaacttat gaattcgttc
    12661 ctcttttgaa ctcaaatttt ctccaataaa caggattttt tttaatccac gttgtaaaat
    12721 ttcagcagcg atttcatatg gaccaatgat tgtatctgtt accatcgcga ctttttcgtg
    12781 ttgtaacaag aagtcgaagt ttggcgtttt accgtggctg ctcgtaataa aacagtcatt
    12841 catcggtaat tgaattcgat gaaacatcat ttgaatcgca ctaattcccg gaacaatccg
    12901 gacatcttct gaaaaatttg ccagcgccca gttgccaatc ccatataata gtggatctcc
    12961 ggaagctaga ataaccacgt ttttgttttg atgcgggatg tttttcaaat ctgctagttt
    13021 ttttggcaaa agcattggcg ttgctgtcgt tagttctgtg atttcttgta attgtcttgt
    13081 tgatccatac actatttcgg cggtacttaa cacttgtttt gcttcgttta ttaccaaatt
    13141 tgtatctcct ggtccaatcc caactactgt aatcatcgcc attcctcccg gagtacatcg
    13201 atatctttcg ttgcagcaag caacccacgt tcggtcgaaa aagtaactac atcgacttcc
    13261 acactaggtt tcgtgaattt caaaaatcgt tctgatcttg ctttgatttt ttgcacaatg
    13321 acgtcatata cttgggtaaa gccagcttct tcaattaatt cgcctgctgc ctctgtcgta
    13381 ttgcacttct ccactgcttg taaaagcgat aacggggcgc cgagcaaagc taaattagcg
    13441 actaaaattt ccgcccgcgc atctgcatct ttactgtacg tcgtaaaaat ccctgctgaa
    13501 accttcacca atttgccaaa atgaccaacc attagcactt ttttgaaagc tagacgctgt
    13561 gtttctttta acatataacc aacgaaatta ctcatggaaa caatatttcc gcttgaaaaa
    13621 ccaagcgtat tctgaacaaa atcatccccg taattaccgg gaacaagaat aatttggtcg
    13681 agaccttgat tccgtttcat ttcaagctcc atcgataagg attttttcca gccttcatcc
    13741 gacatagggg taacaatgcc agtcgttcct aaaatagaaa ttccaccgat aatccctaag
    13801 ttgctattca tggttcgttt cgcgcgctct tctccttctg gtgcatagac tagtatcttt
    13861 gcaccacgat tttcgccaag cgattcgcgt acggttgcta aaatattttt ccgcggtgcc
    13921 ggattaatcg ccgcttctcc cactgcaaca gaaattcctt tttgtgtagc gcgaccgata
    13981 ccaacaccac catctaatac gacttccgcg ttatcggtta gatcaacatc tacaaaaatc
    14041 cacattccgt gtgtcgcatc aatatcatcg ccaccatctt tttgaaccgc tgctgtggct
    14101 ttgtctttcg aaaacttttg atacgccacg gggatttcca gaatcgttcc gccagtagtt
    14161 gtgacttgta ctgcactcac ttcttcttgc gttagaatca tttccacaca agctttagca
    14221 gcagcagccg cacacgtacc agtcgtatag cctttacggt attttttgcc gttataataa
    14281 ataaaatctt ccattactcg tcgccttctt tacatcgtaa tcaagattgc attaatgata
    14341 gctgcagcaa gattactacc gccttttcta ccgcgtgcga caatggctgg gatatctgtt
    14401 tctaaaattt cctctttaca ttcagccgct ccgacaaaac caaccggtac tgccactact
    14461 gcatctgctt gcaattcccc actttctgtc atctcgataa ttttatacac cgcagttggc
    14521 gcatttccga ggacaaatag tttcggtcca tcttttaaag aagcgagttt aattccagcc
    14581 atagagcgtg taatcccatg ctgtttggca atctccatcg tctctgggtc actcacataa
    14641 caatgatatt tacacccaag ttcatctaaa agtcgtttat taattccact aagtgccata
    14701 ttcgtatccg tgaaaatagt tcctttattt tgaagaacat gaatgatttt cgcgatggca
    14761 tcttgttgaa aaacgaggct atctaagtaa tcaaaatctg ccgtcgtatg tattgcacgc
    14821 ttgataatcg cttcctctaa cttgttttga aatgtgtaat ctggacgaat atcattaata
    14881 atttgttgaa taatttcaaa gcttttctct tcaattttgg ctggattctt aatatagttc
    14941 atcttgccac tcctttaaaa taatagtaga taaatacttg caaaaatgat aaaagcgatc
    15001 gttgaagccg tatatagcaa atgaatcgtt tggctaattt ctttttctga aacgggttta
    15061 tttccacttc caatggttgg tttaatgact gtttcaccga agtactcatg cgttccacca
    15121 agtgtgattc caagcgctcc tgctactgca ccttcaggat aagcgcaatt aggactcgta
    15181 tggtttttcc gatctcgaag cccgatttgc caagaagcac gcccgtcata ccttaaaata
    15241 aaacttgcaa tgacaaggaa aaaccaagct aatctcgctg ggataaaatt ggcaatgtca
    15301 tccattttcg cggaaacaaa accaattgcg cggtattttt cgtttttata accgaccatc
    15361 gaatccagtg tattaaccgc tttatacatc aaagcaagta ccggcccacc aatgaataag
    15421 taaaaaagtg gtgcgataac gccatccgct gtattttccg ccacagtctc tatcgtcgct
    15481 ttactaattt cttctgcggt taacttatcc gtatcccgac caacaatcat tcccacttgc
    15541 actcttgcag cagccaaatc cccgtccgcc aaggtccgct gtattttccg agcctctttc
    15601 gcaaggcaag tcatcgcaag cgtcgtatag cctaagtaaa caaaaacagc tatgtaaagc
    15661 cagtaagcaa ttttggcact aagaaataga atgaaccagg atacaactcc agtcatacca
    15721 accgtgagaa caaatagcaa tccaccggca aaatacagtg atttaccatg aaagattttt
    15781 cgtaaaataa tagtcaacca cttaatcaag ttgccgatcg ctttaatagg atgcggccag
    15841 ctatatggat cacctaataa gcaatctaaa atgaatgatg acgtataaaa taacaatatc
    15901 atcgctctat cgctccaaac atatgcgtta ttatcaatag attttgatag aaatggatat
    15961 gcaggtaact agcgaacgta ttaccttttt gataaccgcc gtgccattct ttgacaattt
    16021 tgccatcccg ctttttcgtt aatttcatac gtgttggttc ggtcgtttca aaaacagaat
    16081 gatgaaattc atgaccgcga atagctgtcc cttttttacc aagtagtgtg tcttctaaag
    16141 gttcggcgat acagtagcca aacttccgaa gccgcgttgt catcttacta actccatcaa
    16201 aaacccctac catttcatag gattcagctt ccatttctaa actcgaacca agatacatca
    16261 atccgccaca ctcggcatat attggcttgc cttgttcatg cgccgccaaa atcgattcgc
    16321 gcattgactt gttcttcgct agctgttccg caaaaacctc cggaaatcca ccaccgatat
    16381 aaataaaatc agcgtccgga acttcccttt cttctagcgg actaaacgga atcagtgtgg
    16441 ctccagttga gcgaataaaa tccaagttat cttgatagta aaaatgaaat gcggcgtcga
    16501 gcgcataagc aacgcgcact cccgaaaagt ccggtacttg tatttctggt gggtgtacgg
    16561 tcaatttcgc accagtctta ctaattgcta acaacctatc taaatcaaca tgttccgcaa
    16621 tcaaatcacc aagtaactcc catttcgttt ctaattccgt catttcctct tttggcacta
    16681 atccgagatg acgttctgga agtgccaccg ccgcattttt cggcaaatac cctaaaacag
    16741 gtacatccgt atagcgttca atcgcccctt ttatcaatga aaaatggttt tctgaagcaa
    16801 cgcgattaat aatcacccca gcaatggtta attccggatc aaaacgatta aatccatcca
    16861 caattgccgc cgcagaagtg gatatcgctt taccatccac gactaaaatt acaggcgttt
    16921 tcgtgcattt agcaataaaa gatgtactcg aattatcacg atcaatacca agtccatcaa
    16981 aaagacccat tacaccttca atgacggaaa tatccgccga ctctccgtgc ttttgaaaaa
    17041 gagtagctag catcgcatca tcatctatca gaaaactgtc taaattgata gaagcaacgc
    17101 ctgttatcgc ttgatgataa tttgtatcaa tataatctgg acctacttta aatggttgaa
    17161 cccgcagacc tctttttttt agcgcgtgca taattccaag tgtgatcgtt gttttacctg
    17221 taccacttga tgcagctgca attaagattt tgttcatctt ttttcacctt tcactttagc
    17281 cataaaaaaa gacgccaaac agaacattgg cgtctttttg agatttacgc aaataagcta
    17341 tttccttgta gcacaaagaa acttccccat cgtgaaaatc tacttaatca agacaactcg
    17401 ctcccttaga agttgttttt ggatatcgaa tataaaagcg gtctcctgac ttaacatcat
    17461 cctactcacc agtcttcccg gaattgcttc cagtgacata tgtttggttt tcgtccgtat
    17521 tacagtagct agggcctgta gaggattttc acctctttcc cggattaata tattcaccta
    17581 tttagttgtt tagtacccgg caattcgtct tttccagcgt tctggcaata cttggtaaac
    17641 gacttctgcg acaaaaatgt tgcaaatcga accaatagca agcactggga acaaaacaaa
    17701 caccgcttga tgcattaatg gataaagtgc aagtaatgat aatggacaat taaaaacaaa
    17761 agcaacaata ctagaaacac taaccgcaac taattgattc ttttctgcta gtttttggcg
    17821 cgtaaagcca tatgcaatca tcgttacgcc catcattcca gcaacaatca aatgaattgg
    17881 tagtgtgagc ggaaaacccg ctagtaatgc tgatgttaaa tgaccgaaaa tcccaagcac
    17941 tgctccgtac atcggaccaa gcagcaaagt cccaataaaa gctggggctg cgtcaaatgc
    18001 aactgaaccc attaatttta tgtttgcgcc aattacacac attgcaatca acatcgcaca
    18061 taagactaat ttttgaattt tcaattgaaa agatcaccct ctcatgaaag cgttatttcc
    18121 atttcattat atccctgtta aaccactggt acaaggtcac ttagagcact gaaaacaaaa
    18181 tagtgcaagc ttttaaaatc cctttttttc tgttttatat ggcaaaaata gccaccagtg
    18241 tgaacttttt ctcaatttct atttttgaga tttaaaaaat gacaatattt tgttataaaa
    18301 aagaatttat tgttctattt aaaatgcagg attaaacgtt atttaaagcg attttatggt
    18361 ataattagtg cagaaataaa acagggaggg aaggactttg gagaaagaaa aagttgtaaa
    18421 tattcaacct ttgatggata gtcaagtaga gagccaattc acccaacaaa ttcaagaaga
    18481 tttcaacaaa aaaaatccag atcactctgc cctacttcat tcacttgaaa ccgttgaagt
    18541 gcttgatgtt ttaagcgatt attactctgc acatgaaaaa caaaaacaac caagaaaaga
    18601 aaccactagc gtaaacaaaa ctggtaaaga gcataaagaa atcaagcaag ctattcgtta
    18661 cattaaaaaa aacattcacc gctccatcac attagaagaa gttgctaatt atgtctatct
    18721 aagcccgttt tatttaagta aattatttaa aaacgaatta aatattaatt ttattaatta
    18781 cgtcaacgaa caaaaaatgc tctatgcgaa agaacaacta gaaaaaagtg actgggcggt
    18841 ccatacaatt gctaaaaatt taggtttttc aagggcaagt tatttttgca aagtctttaa
    18901 aaaagaattc gatatgacac caaaagaata tcgcgactcc ttaaaataaa aaacgatttc
    18961 agccaaagcc gaaatcgttt tttattatta ttatgactgc caatcagccg gataagtaac
    19021 ataaataaat cttgcttcac cagttacgga aaacttgatt tggctacctt ttggaatgaa
    19081 aataatttct cctggacctg ctgaaacagt tcgaccatca atgacaacat ctagtctgcc
    19141 ttcgataatg tagtctactt catcataatc caagaaccaa tcgaaagttg tatctttcat
    19201 ttccattaaa ccaaaaccta gacgtttact ttcttctagt gttactaagt cttttgtata
    19261 aacaacatcg ctaggatttc ctgtgtctaa tcgatcttcc tctgaaactt ttactacagg
    19321 aagtttcacc gatagaatac cacttggatc aacgtgtttg gaactttggc ccattttttc
    19381 taggacaact tgttttacta gttgctcaat taattcttta ctaatatcag ccattatctt
    19441 tcaccgccgt ttgttctttt gctttatttt tcttcatcat tcggttagcc atatagatac
    19501 cgacagctac ggcagttact cctccgacaa gttttccaac aatcatcggg aaaatcatat
    19561 cttgggcaac cccagctgtg aaacctagat gatcccctaa aacaaaggcc gcagatacgg
    19621 caaaagcaac gttaataatt ttaccgcgct catccatatc ttttagcatt tggaacattg
    19681 ggatactatt tgcaagtgtc gcaaccatac cagccgctgc aacttcattc atacctagca
    19741 atttacccat tttcataagt ggtttattga acacttttgt aataacaaaa actaaacaga
    19801 aagctcctgc tagaactagt gcgataccac caacgatttc gataccttcg ccaattggtg
    19861 caattcctgg aataatagtt aatccagtaa gttgttgaat agctccagca actagcccaa
    19921 tagtagcaac gattactacc ccttttccaa aaatcgtgaa gcctttaatc atgccttctg
    19981 gtttgaacca aaggcctaac ataataaggg cagctacaag aataattggt actaagtttt
    20041 tgaaaatcat gattggagag aatccagcta caagtccacc gattaaacaa ccaattggaa
    20101 tcgtaataat accagataat acgccagttg ctaaatattt atgatcttct tttttaataa
    20161 ttcctagtgc tactggaatc gtgaaaacaa tagtaggtcc catcatggat cctagaatag
    20221 ctcccgcaaa tagaccagcg tcgggagtta gcgcaagttc ttgagctagc gcaaaaccac
    20281 ccatgtcatt cgcaagtaac gttgttgcaa acattgccgg gtcagcccca agcgccgtat
    20341 aaattggtac aacaatcggg cttaaaattt ttgctaaaac tggcgctaat gtaatgatac
    20401 cgaccattgc tagcgttagc gatcccattg ccataatacc ttcttcaaat tgtgcaccta
    20461 agccaaattt gttgccgata attttgtcaa tagctcctag aatcataaag attaccatta
    20521 aataaataat aatttcatta atgctcaaaa gtgttcctcc attctataga tagcgtttta
    20581 aaagttcatc aggagaagga atgaccgtat gatgtatcac cttttttggt tcggcggttt
    20641 cgattagaat ccgcatccct tcttgaatag cactaacttc ccctgtaaaa acagccacaa
    20701 atttcccacc aatcgaagca ccgagcgtca tgcgtttcaa atgaatagcc gattttttca
    20761 gcgcttcatt tactgcattt agtccagcgc ccaactgact gatttcgata attcctactg
    20821 cgtcaacttc cactttaggg tgtttattgt ttagaaaagc aagtaattct tcgtgcgcca
    20881 tatgcaaaat ataagaagaa acatgaaatt tgccagcttc ttcttttgca tcttgcatcg
    20941 cactagtaag ttcaccggaa gcaccttgca aaataatcaa aaatttacca ggacatgtcg
    21001 gacgaaaagt aaataaagtt acattgcctg ctttcaagaa aacatcggcc atttcgtacc
    21061 ctttacttat actcctgagt tcaagaatac ctaaggactg ttcagccata acgttctacc
    21121 gagtcgataa tgccgacgat acatgcgtcc actgggatcg tgttgtcccc agtggatgct
    21181 cgtgctgcgc taccagttgt aacgagcaca agatcgccgt ttcctgctcc ggcattatca
    21241 gctgccacta tggaatgtct tacatcttcc gtttcatcgg tacaaatctc tactagtagt
    21301 agttttaaac cattcagttt ttcgtctttt cttgttgccc ataaactccc ggtaactttt
    21361 ccaatttgca tgccgctctt ccttcctaac tttctttaat gctaattcgt ttttcctgta
    21421 agtaatcttt tgcaagtggt gttaagaaac ttcctttagg caaaatgaat tcgcttttgt
    21481 tcttagtaag tttttcaaca tcctgttcgg tgatgacttt actttctttg gtctctttta
    21541 ccggactttc gataaattcg acaccaaatc ggctcagttt ctcctcatat tcttgaaaaa
    21601 gttgtctgat accatattta gcggaacgtt tataagcatg cgctttgata ccactcttca
    21661 ttatccaagt tggccgccct gctaaaagat gatctgtaat aaattgttct tttttattca
    21721 tcggagcaaa caaactgatt cgagctaatt cagcgatatc caattcttcc agtagtaaaa
    21781 tgtcacaagc gcgttccgaa cgatcataaa gcgaaacttg atattctttt agataacact
    21841 gtctgagagt gtgttctgaa tcttgtccca tgataatcat ttttttctct ggaagttgta
    21901 atcgtctcat gacttcctca gtgacagctt ttatgagtgc gtctagttcc atactcattt
    21961 agcctttgtt ttcttgatta tttgacctcg aattcccttt ttaaaaccac atgcgttggc
    22021 ttcgtcataa tcaatgtgca tatatgtagc aaaatcaggg ctaatccgaa caacaacatc
    22081 atcaaaaatt agtggtctgt caccgttaat tttcacttga acaatttcac tttgggatac
    22141 ttgttgtttt tctgcatcag caggcgtcat atgaatatgg cgttttgcaa caataagtcc
    22201 ttctgataat tgaacactgt tttttgcgga taatagtaaa attcctggtg tccctgctat
    22261 gtctccactt tcacgaaccg gtgctttaat tccaagcgcc gtaccatctg tggagcttat
    22321 ttctacttgt gtttttttac ggattgggcc taaaattaca acgttatgaa taacgctttt
    22381 tggtccaacg atgctaattc tttctttaca aacatattga cctggttgag ataggtcacg
    22441 gaaatgagta agttcatacc caggtccaaa tagtgcatcg actgtttcac gatctaaatg
    22501 aacgtggcgg ccggatgctt ctacttctac gccagtttca agtaacgcac ggcgagtgac
    22561 ttcttcaata aggcttgtta ttaactcatt attcatgaat aagcctcctt actttttata
    22621 ttcacctgtt ctcacgcgga acatcagtat ccagaataaa ctagacaatc ggttaagcgc
    22681 ttgaatgatg tctggtcgtt taatggaata atcggcttcc ttaaatgcta aaaaggcagc
    22741 taattccgtt tcgcggacca tcgttcttat tttgtttaat cgaatgaccg cattccccat
    22801 cgtgtaatca ggcataaaat gtgtcatttg atagtatttt ttcggattat gactacgttc
    22861 ccgcagttct ttttcatcca ttccaagcaa atgaactgat tcgatttgct cgtttaaaac
    22921 ttccgatcgt acaatatttc ttacaaaggt gaggatttct tgtaaatctt ccgcaagatc
    22981 tttaaactca gctgcaacgg aacattgggt ttccagaatt tcagcttcca gtgtatctaa
    23041 ttttccgcgg aaagcgattt gtggatggtc tttaaacaca agcaggttac cacgcaaatg
    23101 cgtcatatgt tcaggcttct catctaaggc tccaccataa atcgtttgga attttgctct
    23161 agtagtttct tttttcactg gctccactac tacttttgtt tctgcaattt catcaatata
    23221 atgaaggtca attttctttt cagacaagaa actcttagct gaaggtgtga taattgtgcc
    23281 tttttttata tcaagttttt tggttgtttt taaatcggtg tgtaaatagg cttttcgtaa
    23341 ctcatcttct gtcaaaatag ccaaagaacc acatcctttt gtcccattta caattggtgt
    23401 tagtaatgtt gggaagcttt gtattgctta aatctggtaa aaagcgaaag tttcgggcaa
    23461 tttccgagtc tgatggaacc cttttgcctt acgctcacgc tttttcctga tttatgttaa
    23521 aagttagtct tattcagcgc tttttggtag aattgcgtct acttcgctgt gtggacgtgg
    23581 gattacgtgt acagatagta attcaccaac gcgttctgct gctgctgcgc ctgcatctgt
    23641 tgctgcttta actgcgccaa catcgccgcg aaccataact gttactagac cgccaccaac
    23701 ttgttcttta cccataagtg ttacgttagc tgctttcacc attgcgtctg ctgcttctac
    23761 tgctcctact aaacctttag tttcgatcat acctaatgcg tttgcgtttg ccattttaaa
    23821 attcctccaa ttagtgtttt attttttatt ttaattctgc taaaactttt tcgactaaac
    23881 tttggatgag tgcgtctgca tcaaccggaa gttcagatgt tgcttggttt tcttctttac
    23941 gaatatcttc taactctaaa acgccagtag cgatgcgacg aatgttgaaa agattttcag
    24001 gtccgatatt atcagatgat gaacttcctc caactgcccc acaaccaagt gttaaagcag
    24061 gtacaagatt tgttgttgcg ccaattccgc caagtgctcc tggtgtatta actaagagac
    24121 gggaaactgg ttttttcagt gcgaattcgc gaatgatttc tttatcttca gagtggatga
    24181 ttaaagtatg tccagctcct tcatgataaa gaatatccat gctaagttca caagcttctt
    24241 gccaagtttc ggctgtatag aacgccaaga ttggagctaa tttttctctt gaataaggga
    24301 ttttagcgcc aacttttgtt tcttcagcga taagtactct tgcgtcagct ggaacagtta
    24361 gaccagcaag gttagcgata tgttgcacgc ttttacctac gattgctgga ttcatcgaac
    24421 catttggacg taagatgaat ttaccaagtt gaacagcttc tgcatcggat aagaagtgtg
    24481 ctccttgttt tctaaattca gcaatgacag cttctttatt cacacgttcc acaacgacag
    24541 attgctcaga tgcgcaaatt gttccgttat cgaatgtttt ggaatcaaga atatgtttca
    24601 ctgcgcgagg aatgttagca ctgcgttcga taaatgctgg gccattacct ggaccaactc
    24661 caattgctgg agtaccagat gaataagccg cttttaccat tgcagatcca cctgttgcaa
    24721 ggataactgc tgtatctttg tgtttcatca gttgatctgt tccttggatg gttggaacag
    24781 tcatacagct gatagcgcct tttggacaac cagctttttc tgctgcttca ctaatgattc
    24841 ttactgtttc aagaattgct tttaatgcgt ttggatgtgg agaaaatacg atactatttc
    24901 cggctttaat ggaaataagt gttttgtaaa taacagtgga tgtagggttt gtagaaggaa
    24961 ttaatcctgc tactacgcca agtggaactg caacctccat tactttcttt tcgttatctt
    25021 cttttaacat accaatggtt ttcatatctt tgatgtaatt gtaaacatgt ttcgacgcaa
    25081 agacgttttt gattactttg tcttgccaaa ttccgaaacc agtttcttca tgggccattt
    25141 tcgcaagttt ttcgcgagca ccataaccgg catcagctat tgcttttaca attgtatcaa
    25201 tttgttgttg gctcattgca gcaagttctt tttgtgcttt gttagctgat tcaatgaggt
    25261 tacgaacttc ttggattgag cgtaaatctt tatcttctag tgccactagt tttcactcct
    25321 tccataaatg tcttttagtg cgtgaacaag tttatccttg ttcgcatatt taatcttgct
    25381 ttttgggata ggcacattat ttaatgtgta agcaagtttc cttagatcaa taactttcat
    25441 tgcgcgaagt tttttctctg cacttttcgt gtttgtgttc acttctacga cttgttgaat
    25501 aacttctttt ggttcttctt gttcgacttc ttttggttgt gttttaactt cttcttgagg
    25561 aacaaaaagt gcttttgtat cttcgctcat tcttgcgata acatggcttg atactaaaca
    25621 acctaagtct tctgttgcag ctttccctgc ttcgatagct gcatttactg cacctacatc
    25681 accagttaat tcaaccgtag ttaaaccacc acgaatgact tcacattgaa tcagttcgac
    25741 atttgctgct tttaaacaag tatcggcagc aacaacagca ccaagaaaac ctgtgacttc
    25801 aattaaacca agcgcttcat ttggcatttt ttagcaccac cttaatattg aagtggattt
    25861 tcagccacat tttctactgc cattttgaac gcatcacaag ctgctttaca tgcagattgg
    25921 ctaccagtca aaagtgctcc gccgaagttt gtttcggatg gtgggccata gaaagctccg
    25981 attgttacgt ctgctgcttt tagtgctgca tctaacgcat acatagcttc aagtggaggg
    26041 gcgattaagt aagcaatcgc ttcaccttct gcaacattcg cttcttttga aaggaatgta
    26101 ccagttcttg aaacacagtg cgcgaagtaa ggaacactat catcttcatt tgcactaaca
    26161 aagctagcgc cattttcgat gaaatctact gctacagaaa gaccactttt tacttccgca
    26221 gggcttggtc cggcgataat accgataact tcaccagcga attttgtgga tgcatttcca
    26281 gcaccagcat acatactttt cgcataaaca acatctactt ctgctgcttt tgttgcttcg
    26341 tcaagcgctg tataagttac atcatcacaa tcagatgtaa taataccaag gcttctttga
    26401 tgcggtttta agtctaattg tttaaataga ccattatcta cgttagatac aactttgaca
    26461 cttaaaacgg atgcaggtaa tttatcattt ttcatgaagt ttcctcctct aactagctta
    26521 ttttaaatca ataccagaac attttttctc aagcatattg tgaattaatt cagcaatgta
    26581 tgctcctgct tcaactggtg gagttccgcc gctatggatg ttagaaataa cagtacgacg
    26641 agcttctggc ataccaattg ttggtttgta agcaatatag gcactcatgg attcagcagt
    26701 gactaggcct ggacgttcac ctacaagtaa gcaaactacg tcagcgccag tgatttcacc
    26761 gatttggtcc atagaaggta cacgacaatg tttaacgaaa ataatgttat caaaatctaa
    26821 gttatacatt ttcaaacctt gtttaatgga tggcaagata tctttgatgt tagcttcaat
    26881 tgccgctgag ctaagtccat caccaacaac gatttgaagt ttggcgtttt ttgtcgtatt
    26941 cgcacgaatc acttctacca tttcgttgtc aaattcacga cctaagtctg ggcgagttaa
    27001 gtattcatct ttatcttgac atttagtgtt cactgggatg aagttcattt cttttactaa
    27061 atcctcagaa acgtaagaga aaacggaatc ttgtgctacg gcatggtccg cacggaaacg
    27121 aagaattgtt tctgttttgt aacgtggacc agcacgccat aaaccaagtc gagccggtgt
    27181 catttgtttc attttcaaat aaccttcacg atcagctggt tctggtacta gtaattgttt
    27241 tttgatatct acttcagtaa tatccgggat gctaccttct gttataactg tttcaactac
    27301 agatttagtt ggcgcagctg ctactgtatc ggttgtttta ccaccggaca tttctgttaa
    27361 aatgccttca atcatttgtt ttaattcttg ttcgttcatc gcttagttcc tcccttcctt
    27421 attttaggaa aatagatgca tctccagcac ggctagttaa tttaccattt tcgctgaatc
    27481 ccattttttc catccactga tcaaattctt taattggttt taagccaaat aattcacgta
    27541 aagtggctgt ttcgtggtaa ccagttgttt ggtagttaag cataacgtca tcaccatgag
    27601 gaatacccat gataaagtta catcctgctg cagttagaag tacggacaag ttttctacgt
    27661 cgttttggtc ggctttcata tggttggtgt aacaaacatc acaacccata gagataccag
    27721 ttaatttacc catgaagtga tcttcaaggc cagcgcgaat tacttgttta gaatcatata
    27781 agtactcagg tccgataaat ccaactactg tatttactag gaatggatca aatttcttcg
    27841 cgaatccata acaacgagct tccattgtta cttggtctac gccgaaatga gcgtcagaag
    27901 aaagttcaga accttgtcct gtttcaaagt acattacgtt tggtccagtc gcagcaccac
    27961 tttgaagggc taattgtcta gcttcttcaa tcgttgctcc gtcaaaaccg aaagctgtat
    28021 tacctttttc agaacctgcg atagattgga atacaagacc agttggagcg ccgcgacgca
    28081 ttgcttccat ttgagtcttc acgtgtgcaa gtacacaagt ttgtgttggc acatcccatt
    28141 tgcttcggaa ttcttcaaat ttattaagta aacgaacaac gctatcagta gaatcatcta
    28201 ctgggttaag tccgattacc gcatcgccaa tcccgtaagt taatccttcc attaaggaag
    28261 caaggatacc atcaggatca tcggttggat ggtttggttg tagtctagcg gagaaagttc
    28321 caggaagacc gattgttgta ttcgcatgtg cgattacacg gatttttttc gcgccataaa
    28381 ttaaatctag attggacatt aattttgtaa cagcagcaat aatttctgat gttaggccgc
    28441 gtgcaacacg tttaatgtca gcatctgttg ttttatggtc taaaatccat tcccgtaatt
    28501 cttccactgt ccagtttttg atggaatcat ggatacggtc atttacttgg tcttgaataa
    28561 tacgcgttac ctcatctgtt tcatatggga caaccggatt attacgtaaa tctccaagcg
    28621 tcattttaga aagcaccact tttgcagcta cacgttcttc tgcagattca gcagcaactc
    28681 cggctaaacg gtcgcctgat ttttcttcgt ttgcttttgc caacacatca gtgatggatt
    28741 tgaactggta tgtatggccg aataaattcg tttttaaaat cattcgataa atcctcctct
    28801 caaaattaaa gctatttatg tggatcagtt aaagactaag gttttaacta ctactggtag
    28861 cactttcccg tcagcaactg gttttcctat atcaatataa tcaccattat cgactttgac
    28921 actatccaag caaattagtg gatgcccggc tggtaaatgc ccgaagatgc tttgtccgag
    28981 ggcttttgcc atgtcgtgcc atgtaatgat aattaaggga tgaccaagtg cgattggttc
    29041 tttcattcct tcgcaaatgg ctttcgcata ttctgttact tgctggaaac ttgggctatt
    29101 ttcgccttca attgcaagtg caatatgttc catttcattc tctattttga accagctaag
    29161 tttttccttg atgacttctg ccatattttc atcttcttct tgtttggcaa gtttcaaaat
    29221 tggaatgttt tttactggga aaattttctc ggtgtaagta atcgtactac cgctaatttc
    29281 agctgtgtgt gaaccggctc cgaccactgt tgcccgtatg gtttcgacag attcgatata
    29341 ctttttttca gtcattaaac tagattctgc aatcgctttt cctagcaata acccaatatc
    29401 tccatatcta aaaggatcac ttagcgcacc cgttgagatg cagtctgcaa cgcctccgga
    29461 aaaagagata cattcaatct ccgttaagaa tttcaatcct ttattcgtaa tgattgtttc
    29521 ataaaaatca tttggcgccc cgaggccaac actattctta agcagctcaa ccatttcacc
    29581 taaaacgggt tgcaagtttt ctggtgaagt tgtttcacca agtttaaccg gataacctcg
    29641 tttttctatt aaagcttgaa tttttggagc aatataggtg atttttcttg tttcacggtc
    29701 tactttaatt aaccgaccac caatatctaa gcaagcagta tcaatgagtt ctccgcgatc
    29761 aaacagcgat aagttcgtgg ttccgccgcc aatatccaaa ttcacaacag aggtattatt
    29821 ctctttggca taggtatgag cacctgctcc ttttccagca atgatgcttt ctaagtcagg
    29881 tcctgctgtt gctacaacaa aatccccagc aaaaccactc attgcatcta atacattgct
    29941 ggcgttatct ttacgagctg tttcacccgt gataataact gctcccatgc caatttcttc
    30001 ttttttaatt cctgcattgg catattcttt cgttacaaaa tcacgaatcg cctccacatc
    30061 aatcaaatta tcagcaagaa tcggtgtgaa cagaatctca cttctaaaaa taatccgctt
    30121 atctgaaatg acaatacgcg gcacggtgaa acttgatgcc atattttgaa tttctaactc
    30181 ggataaaatg agttgtgttg tcgacgtacc aaggtcaatc cctacactta aaattgtttc
    30241 cgtcaaaacc ctcactcctt tctagcaaaa agaaaaagct taaagacaaa taacagtatc
    30301 gttacttggc tttaagcttc atcgcttttt catagctact tctttgtagc atggatagaa
    30361 ttgtatttaa aatcaaacat tgttttcgtt ccgtgttcat tcgattcaat ggttactttg
    30421 cctcgaagtt tatctttaat gtaacttttg acaatggaaa gtcctaggct tttttcggac
    30481 actttacgaa cgttgaaccc atgaccgttg tccgttactt ctgcgtgaat aatatttttc
    30541 tcttctttta tttgtagtaa aatttcgcct gattcatttg gatgaaatgc gtgatcatag
    30601 gagttttgta agagttcgtt catgacaagc gccagtgcca cggttcggtc actgtccaaa
    30661 taaatgcgtt tatcaatatc cattcttaca gctacttttg gacaatctgt acaacatctt
    30721 tcaatattgt aggcgactgt ttcgatgacc atataaaggt taatgccgtc ttccatttgc
    30781 ttcgataaaa gctcgtgtgt cgctgcaatg gcaaggattc ggctgacact ttcatttaga
    30841 atcttctgtg cctccacact tgtagaacgt ctgccttgaa ttcgcaataa ggaaacaaca
    30901 gattgcaaat tgtttttgac acggtgatga atttcacgaa tagcaacgga tttagaaaca
    30961 atttctgctt ctttcacttt aatatccgtg atgtcatgca agatgagaat aaagcggcat
    31021 tcctgctcgt cttcttcttt tacaaaaatc tgcttcataa taaagtaatt cccggcgata
    31081 accacttctt tttttaactg aatcggttgt tttccagttt caatttgata catgattgcg
    31141 tcaaacatca tctggtcgag ggataaatta tcataatgca tgccttggat gtcttccata
    31201 taaccaagtc tttcgtaata ctgatccgca gcgcaattct tttgctgcaa aatcccgttt
    31261 cggtcaaaaa tcaaaatggc atcatctagt tgatcagtaa ttgaatccgt tagtttactc
    31321 atggcagaca gcgtggtaga aacatctcga taagccgttt cttcattgtc aatttcaaaa
    31381 tgagctttaa tttcggcgct aatatcattt tctagaatta gcacggcaat aactcgctgt
    31441 ttattacgaa tcggataaac tttttggcga attaatacgt tttcttgtgt ttttgcaagt
    31501 agatcgttag agttcatacc tgtttccaat gttctaagta cacctggctc attagacctt
    31561 agggctgttt ctccgactac tttgtttttg taaagtgatt tggttgtttt tggtggtgta
    31621 tgatgaataa caagtgcttc actagttagc ttattgtata catcaataaa tacatctaca
    31681 tcttgataca tggctgaaac acttaacgac ttggctgtgt gaattaattc ttcaatatcg
    31741 tgctccgata aatctgtgta gcgtaagcac atttctcgaa tcgttttagt catcgctcat
    31801 cacaatcgtt tctgcgattt ccatcatcgg acagcgtttg tccatgctca ggttacgaat
    31861 catattgtaa gcttcttctt ctgtgatgtt gttctcaatc ataagcacac cttttgcttt
    31921 ttcaatcact tttcgttctt ctaatttttt ggtgagcttt tctaattgct gctctaattt
    31981 tcttgtttct cgccctttgg caatactcat ttcaacagtt ggaatcaaac ttttttcatc
    32041 aagtggcttt actaaataac ctaatgctcc aaacccttta gctttctcgg tgtttttcgg
    32101 atcactaaaa gcggtaagta agataattcc gccagcaagg ccttctgaaa taattcgttt
    32161 ccctgctttt aagccgtcta agagtggcat ttgaatgtcc atgataacaa gatctggctg
    32221 atggcttttg caaagttcga ttgcttcaaa accatctgtc gcttccccta caacattgta
    32281 gttcgcttct tctaagatgt ctcggatgtc cattcttgta ataggttcat catcggctat
    32341 tacaattctt ccattcattc ctgtcacgtc ctcttcttct gctattgatt gattcgtcac
    32401 aataaaggac aaaatcattc tatagaagca tttacttgag cgaaagagta aaagagctag
    32461 agaaaaaatt ctccaagaaa atagaaagag ccccttaaaa atattgtgca atatttttga
    32521 gggagccccg ttgctctgct atatttataa ttccacacgt ctttgtgctc ggttctatta
    32581 taaagtagca tgaaaacgat gtcaataggt tatttgattc cagttgtgaa ataaataact
    32641 tttatgccaa cattttttca agaatcgcac taacatctgt ttctgtcggt attctaggat
    32701 tggttgcagt acatccgtca tttagcgcgc cttccgcgat ttgagcaata ttttcattta
    32761 aatctgtgcg gctaatacca cattctgtta atgtagttgg catattgagt ttcttttgaa
    32821 gttgtttaat ggcattaatt aagctacgaa caccaagacg tgtattcgat gctggcattt
    32881 ttagtaattt tgcaatcgct gtataacgtt ccgctgctcg gttatccgga ttgttaccaa
    32941 aatcacttgt aattccagca ttataactaa ttacgtgcgg taaaagtaat gtattcatac
    33001 gaccatgtgg aattttaaat ttcgcaccgg ctgtatgcgc aataccgtga tttaagccaa
    33061 gagaagtaat gttaaatgcc attcctgcaa gacaagaggc attatgcatt ttttcgcgag
    33121 cttctaaatc atttccgtct ttataagcac gctctaagta tgtgaatact aattggataa
    33181 ctttttccgc cattgcatcc gagtaatcat tcgcttttgt agatacatag gcttcaagcg
    33241 catgcgttaa cacatccata ccagtatctg ctgtaattgc tggtggaaca gattttacta
    33301 agtctgcatc taaaattgct tcatctggca aaatagcatc tgtaattagt gggtatttaa
    33361 tggctttttc tttgttagta ataacagaga aactagttac ttcggagcca gttccactag
    33421 ttgttggaat gacaatgaaa ggcattgcgc gcaccgtacc aagtttttgg ccgaagaatt
    33481 tcatcgcttt cgccgcatca atcgctgatc cgccaccaat tgcaatcatc aagttagcat
    33541 cacattcatt caaaacttca attcctgcta ccacgttttc aatcggtggg tctggaatga
    33601 tttcgctaaa aatcgtatat gtattcgatg gatcaatttt ttctgtaatc gcattaatca
    33661 ttccggaact aaccataaat ggatctgtta cgataaagat ttgtttgtct ttaaaatcga
    33721 gtaaacgatc tgttgctcct tggccaatat aaagatctgt tttaaaacta actttttgca
    33781 tgagattacc tcctagtttt tttaaaataa aaaaagaagc tttgagtaga gaaatttcct
    33841 cttccaactc aaagcttctt tgctaagtaa acagtacgcc tttgtaccgt aaaatatttt
    33901 atttgtccac tttattaaaa accaaacccg tggaaatgtc aaatcttttt ttgtaaatag
    33961 gcaatgaaga tacattcctt gtatcactct tttcgtcgtt gaaaagatca ttgcccacca
    34021 taaaacgaag cggtgcacat ctttgtgcgt atggtgcttg ataaaacgta gctcgttcag
    34081 cttctcggca ccaaaccatt tacagtgggc ttatttgttt taaaaacaaa taaaaaagcc
    34141 ccagtgagac aactacactg gaaccaagaa ttatacatgc tttgcctcga agcagtataa
    34201 ccagttaaaa caattagata aaagacctga cttagagtgt ctaactcctt acagtggcgg
    34261 gaccgtgctg gactttcacc agacttccag tatctaactg tttgtatgaa cgaattcgtt
    34321 tatcaaagtt attatagcat aaaatagacc gcttgcaaga agaatttgct ttacgagata
    34381 atttgaaccc caccactgac aaactcacgg aaataatatc gactgtaaaa agtcgtgaca
    34441 tagcgccgtt ctagctcaaa taaaatttcg agtggatccg ttttttcgag ttcataaagt
    34501 ataccgacaa cggtaccact atgcgaaaca tttaacccca ctaaatccaa gttttccgtc
    34561 acttccacaa tctctcgcca aaatggtttt ggcaaaatag tttggttgca ggctgcacta
    34621 actgatgcgg ctttaccaag taagtgaatg gatttttgcg tgacggcttg ttgaaaatag
    34681 tccattcctt ttgctagatg tccttcgttt ttgagtaatt gcgcttggtg attttcttgc
    34741 cgataagtag ctgtttctaa aatggtaagc ggttctaaca caacgacgcc tagctttggc
    34801 atccaattgg agctttgaat gatgtcccct cttaagtgat cgaacaaagt tagtgattca
    34861 aaaatagtgc tatccgttgg ttctagttgt aaacatagct tggcaatttc agcttctgag
    34921 atagatttat tcagccattt tgctgtagcg ccaattgttg cggcaatatc agcggtggaa
    34981 cttgccatgc ctttcgcgac cggaatagtt gacttcactt gtaaagatac ttgcgggagg
    35041 tctcttttag ccacaccaaa atactcgcaa gtggtttgga atgcgagcca tgcttttgta
    35101 tgcccggagt tatttagtcc tactttatca gataaagtga cttcggaata ccagttgatt
    35161 gggtatgaaa ttagcttctc tccgcctaaa atccagcctt gcaaaagttc gccacaagat
    35221 gccggacacc tcgctttaat taccactaaa aatcacctca agtgcggtta agagttggcg
    35281 attatcttct ctacttttca ctgccactcg gtaataattc tccgtgagac ctcggtaatt
    35341 agcgcaactt cggataaaaa tcccttttaa aagcaatttt tttcgtaaat caaacggttt
    35401 ttcgaggtgg aaaaatatgt aatttacact tggtcggtac acggtaagcg ctgaaaattt
    35461 acttaagcct cggtataaaa agtctcgttc cgcattaatc caatcgaatg tttgtctaat
    35521 ataggcttca tcctctaata gcatttgccc tgctaagtca gcaaatgtat taatcgacca
    35581 gggttcgcgc atttgcatga gtgcttcggc taataagtca ttttttgtca gcaaataacc
    35641 gagtcttaag cctggaatcg cgaaaaactt cgtaaaggcg cgaataattg ctaaatgcgg
    35701 aaatttttct aaatagttga tcatcgaaat tgtttcattt tcttctaaaa agtccataaa
    35761 agcctcatcg ataattaaat atatgtttcg cttttcacat aaatcagcaa tttttatcat
    35821 ttcttgttgc gcgatgagtt gtcctgttgg attattgggg ttgcacaaac aaacagcttc
    35881 gatatccgta tcttgttcaa gcatttctag tacgatttgc gccgcagcaa aattggtttc
    35941 tttcgttaac tcagcataaa caatttcggc atcaaaaaaa gcacgttcgt attccgcaaa
    36001 agtaggcgca agtaagagta ctttttgcgc ctttgttact tttgctattc cgaaaatcag
    36061 ctctgtcgcc ccgtttccag ggattacatt cgctaggtcg agttgatgaa acgaggcaat
    36121 tcgcgcacgg agcgccaagt aatctggttc tggatattct accagtttgt ccaaatttgt
    36181 tgttatcgtt tgtttcaaac tagctgggac tcctaatgga ttaatattcg cactgaaatc
    36241 gagcaccatt tctttcgtta atccgtgttg ttttgctagt tcattatagt tgccaccgtg
    36301 agaagccgtc gttattttca catcaaatcg ctccttaact tatcgtttgt tttgcatact
    36361 tttctacatc gcgagcaatc attagttctt cattggttgg aataatgcac actttgaccg
    36421 cttcatcatc attgctaatt atcatatcac ccgcattatt ttttgtcaca tggcatgtta
    36481 caccaagata acttagctgt tctgttacca tttggcggat taatggcgaa ttttcaccca
    36541 cacccgctgt aaataataat gcgtcgcaac cgttcattgc ggaggcataa gcaccgatgt
    36601 agttgcatat ttggccagta aacatacgaa gtgttaatag cgcgcgtgaa ttaccttctt
    36661 tggctgcaat ttcgatatct ctgaaatcac ttgaaattcc cgatacgcca aggacacctg
    36721 attcactaga catcatatgc atcacttcat ccaagctata gcctaattca tccactaaat
    36781 acgggatgat tgtcgcgtca attgtaccag aacgtgttcc catcatcaag ccagcatttg
    36841 gtgtaaagcc catggaagta ttcactgatt tcccagcttc aatcgcacaa acactcgctc
    36901 cattgcctaa atgacaagaa ataattttta atttttctaa aggtttttcg agaacttctg
    36961 ctgcttttcc agccacatat ttatgactcg ttccatgaaa accgtatttt cgaatatgat
    37021 gtttttcata aagttcataa ggaagcgcat ataaaaagtt ttcttctgga atcgtttgat
    37081 ggaatgcggt atcaaatact gcaacagaaa ccgcatttgg cagcaattca cgaaaagttt
    37141 tgattccgat gatattcgct ggattatgta gcggcgcaag gtttgtcaca gcttcaatcc
    37201 ctttcaccac ttcatctgtt acaacacagg acgtaacaaa atcttctccg ccatgcgcaa
    37261 cacgatgtcc gacccctgta atttcgctca gatcattgat tacttgatgc gccttcagct
    37321 gctccagtaa aatctcgact gcttccccgt ggttattgat tgctcgtatt tctttgattt
    37381 tttcattttg aaaggacatg ttgaaaatgg cgtctggtag accgattctt tcaattaagc
    37441 ccttaactaa aacttcttct cctggcatcg taaaaatttg gaatttcagt gaagaactcc
    37501 ctgcgtttat cgccataatt ttgtgcatat agctcagtcc tttctcattt ttaaaggagt
    37561 aaacaaagcc attcttgttt actccatgct tttttataat aaaatgttaa atagtccaat
    37621 ggctaagaga ccaccaatga ttggtccgac aattggaatc caagcgtaac gccagtctga
    37681 cccactttta tttggtactg gtagtaaaaa gtaagcaagt cttggtccta aatcacgagc
    37741 tgggttaatc gcataacctg tcgttggtcc aaaactcatt ccgatggcaa ctactagaaa
    37801 gccaaggatt aatggattta aaccatctgt aaaactgttc gctccaatca taagtaaacc
    37861 aaaaatgaaa gcaaatgttg cgataatttc actgattaaa ttgaaaggtg tatttctaat
    37921 cgctggtcct gtggaaaaaa taccatgtgt atcaatttct gggggagtcg ctttaaaatg
    37981 cggatagtag tgtaaaataa cgatggatgc tccgacaaat gctccggcga tttgcgcgat
    38041 aatatatggc accacatctg cccaagggaa tgatcctcca actgcaagcg caatagttac
    38101 agctggattt aaatgcgccc cgctatatgc tcctgcgaca taaatcccta tcattaccgc
    38161 aaaaccccaa ccaaatgtaa caactaccca gtttgctcct tgagataatg atttatttaa
    38221 agtcaatcct gctaaaaggc cgttcccaaa cataattaaa accatcgtac caataaattc
    38281 cgccaaatat gctgacatag tttatcctcc tttttaatgt aaattctaaa ttatttgttc
    38341 taaaatttct tttagttctt gatgtgaggg tgtcgtagga ctagttggta agcaagcgtc
    38401 tttcagtgca ttcgttgcaa tttcgtccat ttttgcatag actttttctt ttgctacacc
    38461 ggcgtctgtc aatgtgcgcg gcatttgcat atgttccatc atcgctacaa ttctttcgcg
    38521 aagtaagcgg acagctgttt cgttcgagtc tgatctggaa gcaatgccac aaatgcgtgc
    38581 catttctgca tatttttgtt ctgtttcacg atttttaaat gcgttaaaac gaatcactgc
    38641 atctagtaag atcgcattgg ctagcccgtg tggtacgtga aactgtgcac caagttgatg
    38701 cgcaatactg tgattcaagc ctaaattggc gcagttaaaa gccattccag ccatagtaga
    38761 agcattatgc attttttctc gattcgctaa attacgacca tcatcataac agctcgttaa
    38821 gaaacgtaac gttaattgca cacttttttc accaagagca tcggtataat cgcttgcatc
    38881 tttagagaca taagcttcaa ttgcgtgtgt taagacgtcc atccctgtgt tcgctgtaat
    38941 agctggaggt accgtaacaa ccagttgcgc atccaaaata gccatatccg gaattagttc
    39001 atctaagaaa agcggatatt taattttcgt tgttggatca gtgataacgg ttgcggctgt
    39061 aacttctgaa cccgtaccgc tggtggttgg aattgcaata aaagtactga tattgatttt
    39121 ttccaaacgt ttggcgaaat agtagattcc tttagccgta tcaatcgctg aaccaccacc
    39181 aaaagcaatc atgacttgcg gttggatttt gcctgcctca ctaacccctc cagctacttt
    39241 ggaaataggt ggatcaggta cgacatcggt aaaaatatgc acattattgg atgtatctaa
    39301 ttgtccaatt aaaccttgaa gcccttcccc atcagccaaa aaacggtcac agataatcca
    39361 gacattttta tttttaattt cttttaaaac ttgtaaacta ttcgtaccaa aagctacttt
    39421 tgttttaatt tgaaagctgt tcattcagtt tgcctcctct taacgaatcg aaaaaccatc
    39481 tgttaaaaca caacggcgac gtctagcaaa atgacgcgct gtagtggttc cttctccggt
    39541 aggcgttgca atagtgaaag tagtgctacc ttctcctcta aagcctaatc ccgcaaatga
    39601 aggaccattt ttgacaaaga tggatgtttg catatctcgt gcagctttat ttaatctaga
    39661 aatattttgt gaatgcatcg tagctgtgtg atgcaagcct tgctctaact caatagcgac
    39721 atcaagcgct tcgtcaaaat taggaactct tacaacagga acaatcggca tcaataattc
    39781 tacagttgca aaaggatgtg ttttttctgt ttccacaata attaaacgtg gtgaaaaatc
    39841 acaaacaatc cccgcttctt ttaaaatttc tgaagcactt tttccgacta gttttttgtt
    39901 tgttacgcct ttatctgtga cagctacttt ttctagtttt tgaatatcgc ttggattggt
    39961 cacatgtagt gcaccatttt tttccatttg gaacattaag aaatctgcga tgctatcaac
    40021 tgcaacaata cttttctccg caatacatag aatattatgg tcaaaagatg cgccgtctac
    40081 gatatcagca gctgcttttt cgatgtttgc tgtctcatct acaatagatg gcggattccc
    40141 ggcacctgcg ccaataactt ttttaccgga ttgcatggct tgaagaacta caccagggcc
    40201 acctgtaata acaaggagcg gtactttcgg atgattcatc atttcttgcg cggcttgaat
    40261 agatggtttt tcgactgtaa caactaaatt atcaatgccg caactttcac ggacaatcgt
    40321 attcaacttt tcaatcaacc aaagagaaat atttttcgca cctggatgcg ggctataaaa
    40381 tactgcattc ccagctgcga gcatgccgat tgtattgcaa atcaaggttt ccgttgggtt
    40441 cgtgcttggt gcaacagctc cgattacgcc atatggagaa agttcgtaaa gcgtcatgcc
    40501 attatcacca gtagcaactt ctgtatacaa atcttccaca cctggcgttt tttcaatcgc
    40561 taacgtgttt ttcaaaattt tatctgctac atttcccata cctgtttcag caactgctcg
    40621 cgctgcaatg gattcaattt ctggataaag tgcttcgcga attgctttca caacgttgcg
    40681 gcgttcttct aatgattttt ctttatagtt attttgtgct ataactgctg cttgaacggc
    40741 ctcgtcaact gtatcaaaaa ccccactttt cgcgcctttg accgttgttt ttactggtgc
    40801 atctttttgt tctgctaatt tttctaaaag aacttttttt accagttgtt cgagttctaa
    40861 tgattccata cagaattacc ccttctctat cattgataat gcttttttcg caatgtggat
    40921 atcctcttcc actgatccgc cgctaatccc cattccacca ataatagctc catcttttcc
    40981 gtagattgga acaccaccgc caaaggttac aatatcacca tttgtcagtg tttctaattg
    41041 ataaagtggg gctcctggct gaactgcttc tgttaatttt tctgtactag ttttcattgc
    41101 tacagcggaa tatgcttttt tcgttgccag ttctgcactt actaaaagag cgtgctccat
    41161 tcgataatta aatctggcat tgccgtgcgc atcgacaata gcaagtgtta ctggaacgcc
    41221 aatttcttcc gatacaatac aaacttggtg cattaatttt tcacaaaagg aaaaagataa
    41281 atcgcttgta actgactttt cttggccagt ttgctctaag tatttggcaa caatgagctt
    41341 ggtcgcttta tcgagcattt gtctaaaatc ctcttctcta gcaaggatgt acaagaaatc
    41401 cgataagcga tttacgaatt ttaataactc ttttcggata gctgtttgtt ctgacaaacg
    41461 aactaataat cgctcaccac gcctagcaac agtccttgcg ctatgaagaa atgctcctgc
    41521 tgtgcttgat ccaggaagaa caaaactatc gacttttggc aactttgcag tataatcatc
    41581 aatgactttt tcaagttgat tgatgtcgtt ttctgtaata ataattttgc tagcgaggga
    41641 tgcttcgtgc tctgttgcaa gttctgcgca aacgtaaaac aactgccgct ccacgtttct
    41701 aagcaaagtc ttattctcag ctgaagtcac gaatttttct gctacactaa tttctgcatt
    41761 tagctcatca aacgagccat acgtttcgac acggtcatca tattttttca cacgattccc
    41821 atcaaataat gcagtcgttc ccttatcgcc ggttttggta taaatactca cgagttattc
    41881 actccttact tatcaaaact atcgacaatt gcaataattg ccgaatcaat cgcactattt
    41941 ggttccgcaa aaacacttct agctgcattg ccacgagcaa caagcacata ctccccaatt
    42001 cctgccccaa cagagtcaca cgctacttct tctgagcgca catgctctcc atttgcatca
    42061 accggttgta caatcatcaa ttttttacca gtaagtgagt cttctttttt tgtggaaact
    42121 acacttcctg ttatttttgc cataaacata acgtcactgc ctttcccgca ctgcaatatt
    42181 atttttcgtt aaatattcat ttgcaagcgg tgtaataagc tgctttttat atttgcaaag
    42241 tgtacttccg cttgggatta ccgcgctatc accgtaacaa atcacttgac catttgaatg
    42301 aaagagtctc tcacctttat ttgtaaaaac tgggaactct agctgactaa gcattgtata
    42361 atcaagccaa ggttcaccat tatcatatag ttcaagctca atggttactc cataatctgt
    42421 agctttttcg aaccaagcag ttaatgattc tgctcggttt ccactgagaa ttcgctcaag
    42481 aaaatgtttg tttacttgtg ttaatcgaat cgttccactt tctataaaaa tcgcaactgg
    42541 atcgcgtgga agtttgctga tagcgataga agttttattt gtcgcacgaa gcttcaagcg
    42601 ctggacaatg attttcacta atttttctat catagattct cgctccctga actcatagca
    42661 ataccaagtg gcgtgacata ctgtggataa ttcggttgaa aaacaggcgt cttcaaatag
    42721 ctttcaaacg tatctttgaa ctggctatat gcggaagcac cgccaacaat gtaaagtggc
    42781 tctgagggag atttctcgag atgaacacgg gtaatttctg ccattttttc cactactgga
    42841 cgcatcacag aaaaatgctc actagaatct ttttgctcgc gtttattctg ctcggctttt
    42901 tctactggaa caccgtaata tcccgcaaga acaagcgtca tatgcgttcc cccagttggt
    42961 tcatctgcgg tataaattac ttcaccattt tcaaaaacgc tgattccagt tgtcccgcca
    43021 ccaacatcta caactgcgcc atcttgtaat cctagaactg ctgccgctgc ggtcggttca
    43081 tcaatggtgt acagtgcttc cattccggcg ctctcaataa cattggcgac caccttttta
    43141 ttgtttccta ctgtacctgg cgggatggct ccagaagcat gtgttaaagt tatacctaaa
    43201 catttttctg cgcgttcttt cagtcgtgtc acaacctcta cagactcgcg gtaattgaca
    43261 acgagaccat cgcgaacagc atctgcgaat tcaaacgctc caaaaagtgg cacatcatgt
    43321 tcatctagaa caacaaacac gatggaggaa gtacctaaat cgacgccaac tttcactttc
    43381 tgatcagcag aaactttttg tttaatatct ttattcatta gcgctgcaag ctgttccatt
    43441 cgttcatttg ctgtttgtag aatatccatt tcagcacctc cttatctcgt cacgacttga
    43501 ttatttttgc aaagcacgta ccagcaatat ctgctgcatt tgcttcatcc gtatcaatat
    43561 gcatttctgg tataaattga ttgtttactc gaatcgtaca atgatttaaa acaagacttc
    43621 gcatttctga acctactaga acggatactt catcgccttg tttcacacca tattcatgcg
    43681 ccacactttc tggtaaatgg atgtggcgtt tcgcgacaat cgctcctttt ggtaagcaga
    43741 tttcgctatg tttcgaaacg agtttgatcc caggtgtccc gtcaatatct ccggaaacgc
    43801 ggattggaat cttcatacca agcattcttg catccgtttt agaaagctct acttgcgaaa
    43861 acttccgaag tggtcctaaa atgcggacac gatgcagttc ccctttttct gaaacaacag
    43921 taagtgtttg ttcagcggcg aattcacctg gttgtttgag ccattttttc acttgaatag
    43981 gttcgtttgg aaaaagttgg ttatagtcat tttctgttag atggatgtgg cggttagaga
    44041 ctccaatagg aatctctgtt tccacaccac taagtttatc tgttactatt tgcttgatta
    44101 ttgcttttaa ttcttctctt tccacggctt atagaccttt tggtagcaac gtttctacat
    44161 cattgtgtgg acgtgggata acgtggatag attgtacttc gccaacgtta cgagctgctg
    44221 ctgcgcctgc atcggttgct gcttttactg caccaacatc accgcgaacc ataacagtta
    44281 caagacctga accgattttt tcatacccta ctagtgatac atttgctgct tttaccattg
    44341 cgtcagctgc ttcaattgcg ccaacaagac ctttagtttc aatcattcca agtgcattat
    44401 tcattattat ttcctcctca aattgggttt acttctcttc ttcaaaatgg atacaatctt
    44461 gtcttggatc cccttttact cgtgggcaaa gcgggtcatg acatagattg caagtcgctt
    44521 ctgccgggac ttcggtttct tccacttttt ctgtttcaac cattacttcc ggctgttctg
    44581 gctctatttc ttcttttggc caaaatactg taaaaatctc ttcccctggt cgaggaatga
    44641 cttttttcgc aataaaactg tctgaggcta ttgcggtttg ttcgcctgct tcaagcgccg
    44701 cattcacagc agcaacatca ccttccactt tcacggtaat ccagccaaaa ccttttgctt
    44761 tttccgtgtc tacaagttgg atattggcta cttttgccat tgtatctgct acggttatcg
    44821 ctgaagcaag tcctttaatt tcaatcattc caattgcttg atgcattcct tcacctcctt
    44881 atttaaaagg tacacccttg acaagtcgcg ccgcattcat tcccatattt cgctggtttt
    44941 ctagtgtggt tgcgcaaaaa cgatacgctg aaaatagtgg tttatctggg ggtaaattac
    45001 gataatgaat tactaaatga tcatttttca gcgtaacccc tactagaagc ggagaactcg
    45061 cagatgctcg aaatgctgct tgcacttcgt ctttcaaaga cataatttct aattcacatg
    45121 gaatgccttc ttcttctatt ccaaataaaa cttgtttaat actgtctgga ttcgcgtcta
    45181 catctgcatg aaaataaatt gctggcttac taacaactgg aatcatgcct tagcacctcc
    45241 agctagaatt aagcctgttg caactgcatt tctagggcct tctttaccac gaatattccc
    45301 acggccagca acgagtgaat aatgagaaag tgcatcggta attaattgtg gaatctcaaa
    45361 atcaagggct gatcctccaa caattacgac aaatggaata tctcgaatat tcccagttgg
    45421 gctgacatat tttaaagcgc ggatggtatt cgttacaaag acacgctcct tagctgaacg
    45481 gcgaattaac ttgatttttt caattgatac atccccaggt attggcacaa agccatcttg
    45541 ttttacaatc accactttgg caaaaactgt tggagaaagc ggcgtatcaa aaaattgcac
    45601 tgtgccatct tcatgccgaa tgtggaaaat actttcaact ttagcaagcg gatatttttt
    45661 aatatcttcg gctaaataac ggtcttcaag gccaatttct gactggataa tcatcgttac
    45721 catatcgcca gcgccggcta aatgagttgc gataatttct ccttttccgt tgataatcga
    45781 ggcatctgtg gatccagcac ctaaatctaa aatggcaagt ggagtattag ttcccggtgt
    45841 agtaagcgct ccgagaatgg cagcctctgc ttctgcacca ccaattttga cgcttacttg
    45901 cagttcttgt tcgatttctg aggcgatggc tgccatttgt aagtgatcac tttttaccat
    45961 ggaggcaata ccaaccgctt gttccatgga aaactcacct gcaagcccac cttgaacgtc
    46021 tactggaaca aatgtatcca cagctagcaa atcttgaata aaaatatcag ctggtaattt
    46081 atctgttagc ccagccatcg tttggcgcac tttttctagc atgccaccga tatttgttcc
    46141 tggttctccg ctagcattgt cgagttttgg aagtgacata atggcttgca tgattttctc
    46201 agaaccttct gcgacattga cacgctgcgt tctggatcct gattgaagtt cgatatgccc
    46261 cgctggtatt gttcgagctt tgacatcacc ttctggcgtt ttaatcacca ccgccgaacg
    46321 attgccaatt aaagctcgtg ccacaggaat gatatttttc gtttcatctg aattcaaatg
    46381 aaatactgtc gcaataccat atgggttaga aatggtttca atgacttttc cgggagctgc
    46441 aacttcgaca gctgctaaca tatcgaccgg cactttatca ataaaaccaa cttcatcgac
    46501 aatcggaatc ttatggttta gtcggttatg cacgagaacc ccgtcatctg cttgaagaat
    46561 tgcagctgtg atttgatagc cattttcgac gtaagtatta atttgctttg ctgcatcttc
    46621 aaaatcgact gttttcggga taatcacaat gtagtcctca tcttttgatt tagatgtaac
    46681 gtcatccaac agcaccgtca cacctgaacc cataccaagt ccccctggtg ttttaggatt
    46741 gtgaccaatc atcgtagact cagtaatgat tgtttctgta atagtttcca ttgccacatc
    46801 gccaatcact ggagtcgctt cattgatacg gatttcggct aagttctcgg tcgtcgcatt
    46861 tactttctct aaagcaagtc gcaacgcttt aaaaatcccg tgaagatttt gttttgttcc
    46921 tttgataccg gttgtgtccg taatagcact agcaacaaac gctgcttcct tcgaagagtt
    46981 tgccattgca agtgccactt ccgttgtaga attcccgata tcaatccctg caatatactt
    47041 cattcatttc accgcatttc ctacataatc gcgagcaaaa ggagaatttt aattatcgcc
    47101 ttttaatttc ttacgctctt gataaagctg tgctgcttca cgaacataat tagaacagat
    47161 agttgcatga taaacactct ctaattcatc cgcaattgca agtaattctt ctcttgagga
    47221 acgatacgga cgcattgcat tataaatttc taaaatgcgt tcatctggaa cgatcgttag
    47281 ctctgctgca cgttcgaaat tattcgcgag tgttgcacgt ccggcatctc ttgctacttg
    47341 tgcttgcatt ttaagcgttt ccgctgttac acgaacatct tccggtttga ttgtgccatc
    47401 tagaacactt ttcaacgtaa tgtcgtctaa tgattttgat gtcgatgttt ttacaagttc
    47461 tggacgtttt gttccgagtg gataatctcg tactgtcagt gtatctccgc tcactttttg
    47521 ggaagttgtt gtggagactg cgccactatt tacttcttgt aaaatatttc taaccatatt
    47581 ttctagtgct tcttgattca tcattttcac ctcactatta gtttacttgt aattcgactg
    47641 cgtttttccc ttgaacaaca tgttttgttt ctttgatatg aagtaaagct gctttggctt
    47701 ggaatttcgg acgagccatt tgatcattga ccattggcac tggatttggt gattcacctt
    47761 tggcatattt cgccgcgttt ttaccaattg ctcggtatgt ttctagcgta attaatggcg
    47821 cttgcgggaa tagctctaag ttagaaagtg gttgtaaatc tttttggtgg attaatgctg
    47881 taccgcgcga ctgaatgccg atacaaatgc cagaaccact taatttgtcg ccttctactg
    47941 caacgaaagc tacgtcagaa gaacggaata cacgaaccac acgtgctttt aacccttctt
    48001 cttcaatacc tgcaatcact tctcgtaaaa tttgtttatg tggaacaccg acaatatttt
    48061 ttgtttgata tttaccaaaa gctggcgcga ccgcaataac aacttcatct ttttgtctac
    48121 ccggctccgc gtccccaact tctgttaaaa agctttcatc cgaaactgca acacttggct
    48181 gttctttttg gaaagaaact ttatcttctt ttagctgtaa ttcatctagt acttccgaga
    48241 taattccgcg gagtactttt tcgttaattt caaccatgtc tcttaatcct cctttataaa
    48301 aaatgggaag tagcttattc taattcgttt gcatcaactg caacagcgat atcttttaat
    48361 ttttcccagc gttcgccctc taagcgataa ccagttccag gacctgcata atcatttaag
    48421 tcattgacgg aactaatgac attccagtct ttatcaatga tggcagatgt atgaaggaag
    48481 tccccagata cacgttgttt caacatattt agtacacttt cagcaacatc atcgaatccg
    48541 ccagcagata acgctttaac aacatccaga ccagtaacac cacggtccat catttcagca
    48601 gctgctttaa tatcttctac catgttacgt tctggcatat ctttacttcc acgtgcatac
    48661 gttgctgctt ctacttccgc atcggttact tctggaagac ctaatttatc aaagacagct
    48721 tgaattacac gtgccgcttt atttctaact gcaacgactt cttcttcggt aactggcgtt
    48781 aaaccaccgt ctacttttaa atcacgttgc aaaatattgt aatcatcaaa gtcatctgca
    48841 tcaaaattgg aaccagcaaa catattgtca tagttaggtg ttgcactgta accagaggaa
    48901 atataatctg ttcctggtaa aaattgcatc aataaacgag ctgtacgacg aatatccgag
    48961 tgcgagaatg tttggtcgtt accagaagct acttctagat ctaacattac ggcaattaaa
    49021 ttctctgcaa gaaccgctct aataccactt ggtacggctc ccggaattcc gatacaacta
    49081 atcgaaccat tttgtaaccc ttgaacacca gccgctttcg taatgaaaat acagcgagat
    49141 tcaagataaa gcatcgattt accttctgcg taacccattt gaacttcaga accagttccg
    49201 gatgtgaagc gcattttcaa accgcgagac gcgtaagcac ttgccaaaat acctttggac
    49261 caaggtgtat cgtctccgtc tgtaaataca ggttctgtac cataaacaga aatcgtttct
    49321 gcataacaag ttaaaccacg cataccgagt tctaattctg ttgcttcttc gagagaacat
    49381 tgcgttaata cgccaccacg gccagtttgc gaacctacta ataagctaag cgcgttaaaa
    49441 ggtgcataac gaactaccgc aacggttgtt tcttgctcgt caaaaccacg aattgctgct
    49501 tctgccgcat ctgcagcaat ttgaacagga ttatcacgca agtttgttac gtgggcctga
    49561 gttgttggtg ttctgcgaga gcgcattttt tgcatcgaca tcatcatttc gacaacgttc
    49621 atttgtgaaa ctacttctac tatttttgcc ggtgtcatag ctgttgtaag taaaacgatt
    49681 ttttcccgtg gcacatttgg gtcgcaaagc atatttgcga gcttcacaga atccatttgc
    49741 ataacttctt ccgcacgaga taaatcgacg ccatatttag cgatgaaatg gtcaattaag
    49801 tcaaagtcag cgagtttttt gctgtccatt tcgactactt ttccattttc tattttaatg
    49861 cttggtttcg gatcattcgg gctttccatt gcgattaggc cttcttcaat ccattctttt
    49921 acaaaaccat cttgattgac cgggcgtttt gctaattctt caaagcgttt tgatttcatc
    49981 agtcgttacc ctccgttcta aatgtaggat ggacgatcat ttttcggttc atcccctaaa
    50041 gctccaagta attttttacc aatttcacgt gctgaaataa cagcttgacg gactgcacca
    50101 gaatctccag aaatacaaag aatcacttca ttggagaaac ttgttccatc tgctggcgag
    50161 gagtatgcaa cgacatctac gttagcggat ttcactgcag tatctgccat aacaacgcca
    50221 atcccagccg gtgcaccaac cataagaccg aatgcttttc ctacaggtgc gccgaatgct
    50281 gtattaagtg catgacttgc tcgcgctgta tattgaagtt cgatgtgtcc agcttcgttg
    50341 ccgtaaacat ctccgaaagt tttatctaat tcattcagtg caacttctac tgcacgtttg
    50401 acatcagaaa catcatcacc accaaagata attaaagaac cgtgacccgc accgcctttt
    50461 gtatcacgtg gtaattcgat ttttactact tctgtatttg ttgcttttac agcttcatct
    50521 gctgccataa tatgtgggcc tgcaccagta cgggctccta aaatacctat agaacggtaa
    50581 gacttttcaa gcttcattgc ttctaaaagt tgtccgtcta cattcgcaat cactaggccg
    50641 attgtatctc ctattgctct tcctacaaat tctgttaatt gaactgcttt ttcactcatt
    50701 tgacgtgatc ctccatcctc tactagtttt tccggggcat cattaaccgt ttccattacc
    50761 tgttttagaa tttcgtcaat tagtttattt tgctcactca tctgacttca ccctcactgg
    50821 taaaatttct tccacatcag tatgcggacg aggaataaca tgtgtactca tcacggtacc
    50881 tacatttctt gctgctgccg ctcctgcttc tgtcgctgct ttcaccgcac caacatcacc
    50941 acgaaccatg acagtaacca gtccagaccc gattttttcg taccctgtta atgttacatt
    51001 agctgattta accatggcgt cagcggcttc aatggcgccg actagccctt tagtttcaac
    51061 taagcctagt gcttcttgca tgggtgtacc tccttctcaa aataagtatt ttactctctc
    51121 agtataggca atccggaata taaatagttg ccgcttccaa atagaaaaaa agaagacgcc
    51181 aatcgtgttt taacacaatt ttgcgcctcc aaaaaaaata acgacaaaaa gccatccaat
    51241 aatgcatggt ttgggctttc tcttatgaaa ttactcttag caatatattg ttatcttcat
    51301 ggcaagaaaa tgtaagcgca ttataaatat gctatactaa gaacgacaga aacacgccaa
    51361 gtctcgccga aaggggaata gctatgttac tacagtccaa aagcaacgaa atgctcattg
    51421 aaaaagtaat ggatgagttc tcagccgcaa ccagtttagc ctccgttgtt gtagatatac
    51481 acggtaccga agtttctaga ttatgtaact ttactccttt ttgccaactt attcgctcca
    51541 atcccaaata tcgctccctt tgccaaaaat gtgatatgtt tggtggactg gaagcctcca
    51601 aaaccggaaa gcctttaatt tatcgatgtc acgccgggtt aacagatttc tcagttccca
    51661 tcgtcgtcga aaaccaactt agcggatttt tacttagtgg ccaggttatt tgtgaagaaa
    51721 gtagcgaagt tggtaatatt caagcagaag aaaccgattg gaaaaatgat aaagagctca
    51781 tctccgcatt tcgctctgtc cctgttttca gctccaagaa aattaattct tctgccgaaa
    51841 tgctcacgat tatctcccag tattacttga aatccgaaat ggaaaaaagc cgggaagagc
    51901 aaaagcaaaa aattgttttt catcatgcaa aaatagcgca tcatgaagaa aataaagaaa
    51961 ttcggaaagc acttaagtat atcgagaaaa atctcaaccg accgattaca cttgatgaag
    52021 tggcaagtca tgtgtacctt agctcttatt attttagtaa gttattcaaa aaagaaatga
    52081 atgtgaattt catcaattat gtgaaccaaa agaaaatgtc acttgccaaa gaaatgttga
    52141 aaaatccacg tttgtccatt gataatatcg cacggaacct aggcttcaca caaacaagct
    52201 atttctgtaa agtcttccgg aaagagtttg aagttacgcc aaaaggctac cgcgaaacat
    52261 taaaataagt tttatctaaa agtcatgttc tcttcccttt aggaatatga cttttttgtt
    52321 gcctgaaaaa caaaaaaact ttcatccgtc atcgaatgag agtttatgca cagcaaataa
    52381 gctatacgac ccgcatacgc tttttaggac cccgaaaaag agttgcttcc ggcttatttg
    52441 gcgagtatcc tgacttggct tcatccaaca atcgaacctt cccatacgct aaaaacgtac
    52501 agtggctatc tcgattcttg tccaccttac agttgcgggg gcagtttcgg catcgcaccg
    52561 aattcctctt tcagaaatgt acatacattc caccaacata agacctattt aactacctac
    52621 atcttaccac aaagtattta taaaaaaagc gttttcatct gaaacaacaa aaatctacta
    52681 ttgattagaa ataagaaaat gttgagattt gttgtcccag agcgaataac atccttgctt
    52741 aaaatcgata tcccaatatt gtgctatagt ttgtttttgt aaaaaaagcg caatgactcg
    52801 taaaacaccg agatgaccca cgagcaacac cgtatcaagt tgctgccatt tttccatttc
    52861 ttcttctaat atcgcaacta ctcgctcata aaatatcgga aaactttccc catttgaaaa
    52921 tagtgccgtt tgccagttat tacagtattc attccacgcc tttggaaact tagtgctaat
    52981 ttcctgatat gtataacctt caaagtcacc gaaattcatt tcattcaaag ccggaaaccg
    53041 aagcgtcttt gcgttactta aaatatttgc cgactgcttc acgcgcataa gatcactcgt
    53101 aacaactaaa tcgatcgagt aattctccag cttttcgcgg agttgctcca tttgtcgaat
    53161 accattttca tttaacgcga catctaactg accacaatat tttttcgcta cattccagtc
    53221 cgtttctccg tgtcgcacaa aaataagttg cacttaaatc aacccccaaa gcagcactaa
    53281 acaaaataaa caaataagtt gtcccatttg tccacccgca ccaagcgtat ccccattcat
    53341 accaccaatc cgtttataaa caaatgcccg gtaaataatc gtaaacagaa tcacgccagc
    53401 ataagcaatg acgccaatat aagagaaaaa cgcccctaaa gcaactaaca caatcacctg
    53461 cgcaatcaca accggccacc aaggaactcc tagaaaaatc gaacctagtc cttctttcga
    53521 tcccgcatag gtcatttttg caaaaagcaa cattgtcact cctttagcaa caatcggtaa
    53581 aacgaaaaat aaccaaccaa tttgttgcgt atctggaaca gataggaata aagagccata
    53641 aaaaagaaaa taaaagcaaa tcgcaatcac gccattcgcg cctacacgac tatctttcat
    53701 aatttccagc atacgctctc ttttccgaga agaaaaaagt ccatccgccg tatccgccag
    53761 tgcatcaaca tgaaaaccgc cagtaatgat aatttctgca aaaagccccg caataatcgc
    53821 aactggtaag ggcatcaaaa gagccaccaa agtaaaaatg agccaattcc aagcgccaat
    53881 aatcaccccg acaaacggca gcaaagcact cccttttttc aagttgattt catccatatt
    53941 tatttggaca ggtaacggaa ttcgcgtaaa gaattgaatt aataaaatca atgttttcat
    54001 attacttcca ccttttcgga atgccactca cgacaaaata gacttcttct acttccgttg
    54061 caatttgctg attaatacga ccaataatgt ctcgaaagac gcgtgttaac ttgttttcag
    54121 gtacaacccc taatccgatt tcgttcgtaa caaaaataaa tttggctgag gattgctctc
    54181 ctgcttttaa aattgcgcga acttccgatt gaattcccgc ttctacttca tcagcaatct
    54241 catttgtcaa ctcgcgctca ccaagcaacg aaaaaaacaa attagttact aacatcgtta
    54301 cgcaatcaag cattattaca tcatatttat ttccatttcg ctccaaataa gcagcaatcc
    54361 ctttaaatgc ttcaaaagta tcccagtgtt ctggacgtgt tgcttgatgt ttttttatcc
    54421 tagcttgaaa ctctgtatca ttttgaaatg caattccggt cgccacatat aaaacacgat
    54481 tatatttggt agcttctttt tcagcaaaac tacttttacc acttctagcg ccaccagtta
    54541 caagcatcat ctcactcatg gtaattcctc aactctccta aacatttagc cgctggaaag
    54601 ttctgctcaa atgcttttac ttcacttgct ttaactgcta ctaaaataac agaagcaggc
    54661 cccgcagttt tattcatggt cgcttcatta aaaacgtcac tggctttgaa agtacaatca
    54721 ttaagccgtg ctaaagtatt tgcctcataa gccattcctt tcgacccaac cggcacaact
    54781 tcaagcacat cgctatgctc caccaatttt ttcactaaat gataatctgg catctccgcc
    54841 atcctctgca aaacttctgc tccaacaatc ggttcgccaa atgcaaataa gaccgcagct
    54901 tcgtgcacat ttataagctt aagtgcagct ttagtcgcaa aaccagttac aagaacgcct
    54961 acactagttt gtgttacgtt catattttct tcagtacttc catttaattc aatatgacct
    55021 aaatcagcct taataagttc gtcttttagc cctgcgataa cacgtttacc ggtcggctcc
    55081 atttccgctc cgataacatc actcacagcc actactacag cacctgaagc aagcatttct
    55141 agtagagcga ctctcaaggt caaacgagct gtgacttccg gcgcgactct taaaccatca
    55201 tgcactttct caccaaaccc agcgctaata tcacagctcg tcaaaacaca gccaccaggc
    55261 acatcaatta cagataaatc cctcacttga ggcataaaat aacccccact tagttaaaat
    55321 taatcttcca aatatgcccg aagctcttct attccagttt cctctaacga agaaatataa
    55381 aaaatatgct tcgcgccagc catgcgtaat tcccgctctg ctcgctcgat gtctttttct
    55441 gattccgcta aatccacttt tgtaacaatc ccaataaccg gtttagcaaa aatactggca
    55501 aacatcggtg aaaacgtctg cttcttctcc gttacactct gtaaaattgc gattacagat
    55561 gcatcagccg cagtcacagt gagcgcgctg tagagttgtc tatgctgtac aaattcacct
    55621 ggcgtatcaa tcatttcttg aaaatactcc acagcttgtg tttttttata taaaatatca
    55681 tatccatgta atttctggca cagcgttgtt ttaccacaac caactgaacc cattaccatc
    55741 attttcttca agtgactcag ctcctagtga tttttggaat agaaaagtcc aaaatctcat
    55801 gtaatgaata aacgacttgt tgtaaagctg attcaacaga agaaacatca cctgtaagta
    55861 caacggaccc actaaaacga tcaataaagc caattcgtac gtcacctgat ttagttgcaa
    55921 tgtcactcgc aataatggaa gcctcacttg gcgtaatcgt taaaattcca atcgcacttg
    55981 cgccttcttc taatcctaat tttgtataaa tatcacggtt tgggttggcg attaaatgcg
    56041 ccagcgtcac ctgttttccc ggtacatatt cttgtattac acgctcttta ttatcatcaa
    56101 aactcatttt cttcactcct cttctagaca aactatctca aaataatcct atcatattta
    56161 agcgccacta ttttgtcaga ttgttcaaaa ggcacgcaac cacagtcagt gcgtaccttt
    56221 ctcaaaaact ctatgacaat atattgttat ctttttaata gattaaactc tcaaaaactt
    56281 ctttacgagg tcttggtata actactttat taattaaaag tgcttcttct ttggctgccg
    56341 caagtccagc ttccacagcc gcttcacatg ctgctgtatc accagttaga acaacgaaag
    56401 atttaccagc aatccccgtt gccaaccgaa tatccattaa ctgaacatct gcagctttta
    56461 ctgcggcatc tgcagcaata attgatcctg aacaggaata atactccata acaccaactg
    56521 cattcatctc atctggcact tccgttttgt taattgcttt aattacttgg tcggacacgc
    56581 gaggaatgac taaattcccg acgatatttg ccgcaccaat cttcgttcca gcttcaattg
    56641 attgagctac agaatctact gtccctgcaa ttaatatata atacttccca gggcagcttg
    56701 ctttagcata aatcaattcg gagttggccg cttttagcat tgtgtcaacc gcctcgatgc
    56761 ctttcgaaat actatttaat tcgagaaatc ctaatgtatc cattttcatg acatcacctt
    56821 cttaatatga acttgttctt cggttatacg aataatttga ccgtcaatac ttgcatggat
    56881 atttgcccca agagacgcat caggaatttt cgcaattaaa tcaccttttt tcacgatgtc
    56941 cccttcactt actactggaa tagacggcgc gccaatatgc attttcgttg ggataaatac
    57001 ttcatctaca tctagataat gcattgtttc taaatgaacg tctgcatatt gttgtaagcc
    57061 cattttgatt agaatatttt tgggagcaat tgatttatat tcacgcatcg gatcaggcgt
    57121 aaattctttt ttatcagttt gataacgaac gccttgtttt aaaagttctt ttttcacatg
    57181 aatatttact tggcgcggtg agagccccat cggacaagca attacctcac aaatgccaca
    57241 ttcacagcaa atcatcgctt cttcccaaat cggatctggt ttaatatccg ttatatcttc
    57301 tgcaaccgcg aaatggcgca taactttatg cggatgaata tcgtgaccta attgttttct
    57361 tggacataaa tccgaacaaa gtgaacactg aatacaagcc gattttgttt cattaaaaat
    57421 ttgttccact gtttggtaat gtagcttgtg cagataacca gtatcctctg ccacaatcaa
    57481 acccgaagtt gttttcgtta ctactttttc agcaatggta gacttgtcat ttaatttccc
    57541 catcattggt ccaccatcta aaaataaata ctcgtctaaa ttagttccac cagctgctgc
    57601 taaacagact tcaaatggcg ttccaactgg gacatctaaa agtttcggct ctccaactgc
    57661 tccagttact gtcagctgtt tacgaacaac tggtgcgtca tcttgaattg catgaaagac
    57721 gttccacatt gtcgagacat tcgatacaat acagccaacc attagtggaa taccgcttgg
    57781 tggcacaacg cgtccagtca cttcaaagac catgacttgc tcgtcaccag ttggatagac
    57841 attatccatc tcatgtattg tcacacttgc atctagttct gtaattgctg accgtaaagc
    57901 cgcaatttcc tctgtgtaat accgttttgt tgcaataacg gcaaattctg cacctacttg
    57961 gcttttaacc atttcaattg ctttaatcgt ttctactgca tggtttctca tgacaaaatg
    58021 atctgttttt aggagcggtt cacattccgc tgcgttaata attaagtatt ccacttcacc
    58081 gctaaatttg gcatgggtcg gaaagcccgc tccaccacaa ccaacaactc cggcatcttt
    58141 aatcttttct aaaatggaca tttggctcaa caccctctta atagtttttc agtatacttc
    58201 aatgatagag cgtttacatt ccaaaatcta tagtaaaatt ttgcaaccta aaagagagca
    58261 atataataga ataaaaaacc tactaaaatt agcaggtttt atcattttta ttacgctttc
    58321 cgatttcttc tgtttctaaa ttttctacta actggcgtac ttcccgtttt actttcttgg
    58381 cgtatccagg attcccgcct cctgttgaaa taccgactag caactcattt tttgatacag
    58441 ttgccatatt gaaaaaatcg gaattctttt gttcagtcgt atcattcact agttgttctg
    58501 gcaagcgatc tttcagtacc atttgattta cttctgggtt attcgtacaa ataaatatca
    58561 gaaaagcacc aattagatgt tctgcccggt aagcttcttc tttcacctgc acttgaagct
    58621 ctttaatctc tggcaaaacg tctaacccga caattaaaat atcagctccg gtgtgaagca
    58681 acccctttac tttacgaagc gccaccttcc caccgccaat tatgacaacc cgtttccctg
    58741 taatatcaag cattatcgga tatttcatca tcaagccccc gcacattttt cttcatttta
    58801 acacataatt gaaacatttt tcgggtatag ttaaaataat tcaaaaggag gtaaaataaa
    58861 tgtttaatca agcaaaacga atctccacat ttttcacgtt taacggcaat ggcgaggaag
    58921 catttaattt ttatttagac actttccccg atgcgaaaaa aatcggacta acttacttta
    58981 caaaaccaga gcaaggcggc gatattggca aggttctcaa tgctactttt gaaataaaag
    59041 gtgcatcatt catgattatg gacatgacta acaacgcctc ccctgacttt agctgggcca
    59101 ctacaaccct ttattttgca gatacggaag atgaatttga cactcttttt gaaaaactgg
    59161 ctaaagaagg tacagttatg atggggccag aagcagtaga agcgcttcga aaagtggcat
    59221 gggttacgga taaatatggc attacttggc aactcgcatt cgtataaaat taagaagaga
    59281 aaacgccgtc ctaaagcgtt ttctttttta tattcaaaat gtttgaccat tttcgaccat
    59341 tatgataaga tacctgtatt acaaataaac taaggctttt taaggaggaa ttttttcatg
    59401 gcagagaata caaagaatga aaacatcaca aacatcctta cccaaaaatt gattgataca
    59461 cgcacagtgt taatttacgg ggaaatcaat caggagttag ccgaggacgt ttctaagcaa
    59521 cttttactac ttgaatctat tagcaatgat ccaattacga tttttattaa tagccaaggc
    59581 ggacacgtcg aagctggtga cacgattcat gatatgatta aatttattaa accgacagta
    59641 aaagtcgttg gaactggttg ggttgcaagt gccggcatta ccatttactt agctgccgaa
    59701 aaagaaaatc gctttagcct tccaaatacg cgctatatga ttcaccaacc tgctggcggt
    59761 gtccaaggtc aaagcacaga aatcgaaatc gaagcaaaag aaattatccg gatgcgcgaa
    59821 agaattaatc gcctaatcgc tgaagcaacc ggtcaatcat acgaaaaaat ctccaaagat
    59881 acagaccgca acttctggct ttctgtaaat gaagcaaaag attacggcat cgtaaatgaa
    59941 atcatcgaaa atcgcgatgg cttaaaataa aaaccaaaag gttcacttac aaaatgaagt
    60001 gaaccttttt tattcccttt atggaggact taaaatgaaa ttaacgaaag aaaattttca
    60061 aaaacttgat caaattcatt tatcactcga aaaccgtcac tccatgtccg aaattatcgc
    60121 tattttaagc gaatcttata ttgaaatcac acaaaacggt gttgttaaag acttttccta
    60181 ttataaatcg ctaacaacac ttggcaatag cagtttagaa atcatggatt atgacataaa
    60241 aattttagac gaaacgaagg tcttatccta ttataaattg aaaaacacaa gtgaaaatag
    60301 ctatacaatg cgaagcaacg tctggattat cgaaaatggc tcgtggaaac tcacctttca
    60361 ccaaggtaca aaaatcgtat agaaaaggaa tttgactaaa agccaaattc ctttttttat
    60421 tttcgttttc gtaataaaat cacgctagaa acagctagca ttaaaccact aactaaacta
    60481 gaatgcattc cactatcccc tgttttcggt aaatttctat tatctttagc tactatcgta
    60541 ttaacagaag tagtctgttt cattaaagtt tcagtaactt gaagaactga tttcactgga
    60601 tcaattggat ttacttgatt tgacgggttt actggagtga ctgggtctac tgggtctact
    60661 gggtctaccg gatctaccgg atctaccgga tctaccggat ctaccggatc taccggatct
    60721 accggatcta ccggatctac cggatctacc ggatctaccg gatctaccgg ggtaatcgga
    60781 ttaacaggct tctccaacag tggctgcgta attttaccag aatacgttgt tgttaacgaa
    60841 ccaattgcta cgggtaaatt atactcgtaa tttagaatat aattactttg caacccttcc
    60901 catgtaatct cgccatttgc ataaataccc gcatgactta cttttgtcgg ttgtactctg
    60961 ctgccatttt catcaattac tggagcgggt aaaatcaatg gatcatctac ctcaaccgca
    61021 tctaatacac gcgtttgatt cgctagttct aacctagtta aattggtcaa atttttcagg
    61081 gacgaaatat caattatttg gttgaaacta agagtcaatg tctcgagtgt agttgatgtt
    61141 gctaaactac taatatcgct cacctgattc gcttttatat cgaagtcttc aaggctagta
    61201 agatttttaa ttacactcac atccttgatt tgattcccaa ataaacttaa accaagcagt
    61261 ttggacatat ttttgagtgg agtaatatca ctaatattat ttctccccgc ccaaaacatc
    61321 agcatattag acagattttc gactggcgat aaatcactta cctcacagtc tcttatagtc
    61381 aaaaattcca gttgtgtcat gtttttaacg gcactaatat ccgaaatagg attggcgcta
    61441 acattcagtt ctaacatgtt cgttaaattt tttatcggtt caatcgtttg taagttatta
    61501 aactcaaaat caagtgacat taatgctgtc aaattcgcaa ttggggttaa atcacttatt
    61561 tgatttcttg gcatctgaat gatttctagt tgcgttaaat tacttaatgg ccctagatca
    61621 ctcacttggt taccatagcc aaatacttgt gtgagatttt ttaaatattc tactccttca
    61681 agactttgaa caccttttga atcaaagtgc aaagatttaa ctgtattcaa ttggttttgc
    61741 gtaactgggc tagttgcaga gggaagcttt aaccaatttg ctacaacttg cgcgagcttt
    61801 ggatcaggaa aaatttcatt aatcggcttt gaatctgtaa gcgaatagac tgtttctgct
    61861 tcgactgtat gtggcttagt aaaatcccca atactaaata cacaagcaaa gctcaaaagt
    61921 aaactggttg taatcttgat agtttttttc atagtatcct ccttgattgt caaccaacat
    61981 aatact
//
LOCUS       DASDYK010000005        56086 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.005, whole genome shotgun sequence.
ACCESSION   DASDYK010000005 DASDYK010000000
VERSION     DASDYK010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 56086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 56086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..56086
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.005"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            53..1219
                     /gene="inlP"
                     /locus_tag="U0308_000354"
     CDS             53..1219
                     /gene="inlP"
                     /locus_tag="U0308_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 3 internalin InlP"
                     /protein_id="HEM2315369.1"
                     /translation="MRKVFMFLSTALLLAILSLSFTGLDLKAKAASDLYPLPAPIIDV
                     FPDDGLAKDMARNLNKDSVNDVIDQDDLDALTSLGFETHTITNDSMQLLERAMFNNVT
                     DVSIMEFGAKLTEFPDITTIPHLKTLFFADSPGRLTRNLSLPNYQNYPEMDTITMSGN
                     NLVGSIPDFTGMPALKQLYMSDMSITSDELPNFNNIPLLITLDLSSNQLTTIPDFQNI
                     PNLTFLDLNANLLTNTPDFQNLPNLTDLNLRHNNLTGTMVNYTNLPSLESLNLDYNFL
                     TELPSNVLDTIYVQSQNGELPDQTINQGNTCTIDLPIYFQMEEINMLVSPEVTGEYIG
                     TNIVQLPTTVNAEDNSITVDTSALSPGEYKLDISYNHNYATGGVCSYDWNVTIN"
     gene            complement(1272..2288)
                     /gene="namA"
                     /locus_tag="U0308_000355"
     CDS             complement(1272..2288)
                     /gene="namA"
                     /locus_tag="U0308_000355"
                     /EC_number="1.6.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH dehydrogenase NamA"
                     /protein_id="HEM2315370.1"
                     /translation="MSKLFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHY
                     VSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVDGLHYHGAKAGIQL
                     AHAGRKAVLPGEIVAPSAIAFDEKSDKPVELTKEAIKEVVADFKRAAYRAKEAGFDVI
                     EIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAVKEVWDGPIIVRVSAT
                     DYAHGGLQLEDHIPFAKWMKADGVELIDVSTGGLVNVAPPVFPGYQVPFADEIRRGAG
                     IATGALGLITRGEQAEEILCNERADLIIVGRELLRNPYFAKDAAKQLGETIEGPKQYS
                     RAWK"
     gene            complement(2315..3286)
                     /gene="whiA"
                     /locus_tag="U0308_000356"
     CDS             complement(2315..3286)
                     /gene="whiA"
                     /locus_tag="U0308_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein WhiA"
                     /protein_id="HEM2315371.1"
                     /translation="MSFASETKKELTHMDVSDSDAKVELAAFIRMNGAISFSNQLVIM
                     DVQTENAAIARRMYQLLKDLYEVPIELLVRRKMKLKKNNVYIVRLKSGTRGILEDLRI
                     LEPPMTFTKSIDRGFVKKRSAKRAYLRGAFLASGSVNNPETSSYHLEIFSVYEEHNEA
                     ICALMNQFDLNARTLERKNGFITYLKEAEKITEFLSIIGATSALLHFEDVRIMRDMRN
                     SVNRLVNCETANLNKTINAAVRQIDNIKYIQSTVGLEALPERLREIAALRIANEDVTL
                     KELGEMLTTGQVSKSGINHRLRKLDQIAERLRSGETPAQVGLKISNS"
     gene            complement(3294..4262)
                     /locus_tag="U0308_000357"
     CDS             complement(3294..4262)
                     /locus_tag="U0308_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YvcK family protein"
                     /protein_id="HEM2315372.1"
                     /translation="MKKEMKPKVVVIGGGTGLPVILKGLKKKDIHLTAIVTVADDGGS
                     SGKIREQMDVLPPGDIRNVMLALSNVDPRVVDLFQYRFAVDGDLSGHVIGNLILTALS
                     QLNDSYVDAINVLATVLKIRGKVIPATDQPLILNAEMEDGSIVHGESLIPLQGKHINR
                     VYIEPENVKPYPTAVEAVKEADLIVIGPGSLYTSILPNLLLTELADEIIASKAPKVYI
                     TNILTQIGETDFFSDADHIKVIHEHVGKSFIDKTLINTTTVPKELLFPEDVAQVEHNA
                     KGMEELGVEAIYQDFLSTEDGLVRHAAEKVADAVLAMLPNQTIEKE"
     gene            complement(4264..5139)
                     /gene="rapZ"
                     /locus_tag="U0308_000358"
     CDS             complement(4264..5139)
                     /gene="rapZ"
                     /locus_tag="U0308_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEM2315373.1"
                     /translation="MASKQLKLVIITGMSGAGKTVAMQSLEDLGYFCVDNLPPSLLPK
                     FWELMKESDKMDKIALVMDLRGREFFDSIEPALDELDNTNFITTKILFLEADDKVLVS
                     RYKETRRHHPLEPNGSVLDGINAERELLSDLKGRSQLVINTSNMAPRELRERINNEFQ
                     TEDKDIFNVQLMSFGFKYGIPIDADLVFDVRFLPNPHYIDKMRPLTGLDEDVYEYVMK
                     WPETQTFLDKLVDLLMFTLPFYKREGKTQLVIAIGCTGGQHRSVALTEFVGKAIQQKY
                     ETTISHRDMKRRKGR"
     gene            complement(5247..6977)
                     /locus_tag="U0308_000359"
     CDS             complement(5247..6977)
                     /locus_tag="U0308_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HEM2315374.1"
                     /translation="MNWQEEYQKWVANDKLDSTLRKQLTNMEANEKELEDSFYRNMEF
                     GTAGMRGVLGAGTNRMNIYTIRKASLGLAQFVAENGDEAKKRGIVIAYDPRHMSREFA
                     FESAAVLGHHGVKSYVFDALRPTPELSFAVRHLNAFGGIVITASHNPPEYNGYKIYGE
                     DGGQMPPTGASAVIEYINAVEDIFSVEVANQELLIENGLLEVISEKVDRPYLEKLKEV
                     IVNKELVQERGEDLKIVFTPLHGTGGILGVPALESVGFTNIVKVDEQFVNDPDFGTVK
                     SPNPENREAFLLAIEYGKKFGGDILVGTDPDADRLGVAVRNLDGEYEVLSGNQIGAII
                     LHYLLKQKKAQNELPANAAVLKSIVTSNLGTEIAKHYGAEMIEVLTGFKFIAEQIKHF
                     EETGKHTFEFGYEESNGYMVKPFTRDKDAIQAVLAIAEVALVSKVEGGSLLEDLEQIY
                     AEFGYYKEDLVSLTLSGKDGSRRIKEITSNFREQLPTSMGGFPVERAEDYLRSETTWI
                     ATGKTEAIHLPTADVIKCYFEDGSWFCLRPSGTEPKIKFYFSIRGESKEESATKLEKV
                     KADLMQHIEA"
     gene            complement(7019..8080)
                     /locus_tag="U0308_000360"
     CDS             complement(7019..8080)
                     /locus_tag="U0308_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HEM2315375.1"
                     /translation="MIFIEVMKERFGEFEGETVWKWTMVNDHGMRMSVLNYGAIVTSL
                     ETKDKFGDFANISLGFTNLDDYLAHSPYFGATLGPVAGRITNGQFSLDGKQFQLIQNE
                     GANHRHGGKFNFSKKLWDVSVEKSLDQIVMTFEYCWADGENGYPGNIDAKMTYTLNNK
                     NEWLLDYEAKSDQPTIYNPSNHIYFNLSGEAGSTVLQHQLWVNSDSFLPIDEEFLPIG
                     EKRLAENTIFDLRAGREVAEITQSQDQQVKLVGAGLDHAFILKHENSRPDAVLFDPKS
                     GRRLEMETKADSVLIYTANSLDGSFEIGERTVPKYAGITMETQGLVDAINHDGFGDIV
                     LRPEKPFTSRTAFRFTVES"
     gene            complement(8097..9080)
                     /gene="galE"
                     /locus_tag="U0308_000361"
     CDS             complement(8097..9080)
                     /gene="galE"
                     /locus_tag="U0308_000361"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEM2315376.1"
                     /translation="MSIVVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHKESIHTK
                     AKFYEGDIRDKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLE
                     VMEQFGVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYD
                     MKYVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGT
                     CIRDYVQVEDLIDAHIKALEYLKNGGESNIFNLGSSNGFSVKEMLEAARTVTGKEIPA
                     EVVPRRAGDPGTLIASSDKAREILGWEPTYTDVKDIIATAWKWHVSHPNGY"
     gene            complement(9200..10159)
                     /gene="trxB"
                     /locus_tag="U0308_000362"
     CDS             complement(9200..10159)
                     /gene="trxB"
                     /locus_tag="U0308_000362"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEM2315377.1"
                     /translation="MASEEKIYDVIIIGAGPAGMTAALYTSRADLDTLMIERGVPGGQ
                     MVNTAEVENYPGFDSILGPDLSDKMLSGAKQFGAEYAYGDIKEVVDGKEFKTVTAGSK
                     TYKARAIIIATGAEHRKLGAAGEEELSGRGVSYCAVCDGAFFKNRELIVVGGGDSAVE
                     EGTYLTRYADKVTIVHRRDKLRAQQILQDRAFKDEKVDFIWNSTVEEIVGDGKKVTGA
                     KLVSTVDGSESIMPVDGVFIYVGLVPLTKAFLNLGITDDEGYIVTDEEMRTNLPGIFA
                     AGDVRAKSLRQIVTATGDGGLAGQNAQKYVEELKESLEAEAAK"
     gene            complement(10238..11713)
                     /locus_tag="U0308_000363"
     CDS             complement(10238..11713)
                     /locus_tag="U0308_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315378.1"
                     /translation="MEKDKKTPAKIYPFYPNGQFYFERGVEAFRDQRIKEAIRYLVRA
                     SELEPGEAVILCQLAICYTEIGQFHKSNQLLREVLEQRNGNMEYCYYFIANNFAYMKD
                     YRRALQYANRYLDSSTDGEYTEEAKDLIEVLLEETPFGETIENGFSKLEQEFYSYKKE
                     INRYLAEEDSAAACDILRKVIDEKPNFWPAYNQLASLYFEQLKEEEGVRVLSDLLSRN
                     PGNLLGICDLFIYHFYKGNRKEADELYLELRDVLPVLAHHKEKLGLIHAMMGEYEEAD
                     DLLEQVADLEVTERSKYYYFRAKSSYYLGDVEGAKMFWHSFLECDLYEDVRFPWEQEA
                     DLTNDTRLVLEMLQEEDDLTHMLGVYALTISGNRPELVLFHPLLDMSDWSYMEHLMFT
                     NFDYFPDGAIEQNGYLIAKAMIILKENGVLLNEENMALYKQMFSLVLIDAGKDLILGR
                     YTIETVASAIAKLFLPHLKLELVEEFECSKCARDIERVLSR"
     gene            complement(11798..12295)
                     /locus_tag="U0308_000364"
     CDS             complement(11798..12295)
                     /locus_tag="U0308_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEM2315379.1"
                     /translation="MRRLDRFKAPDDTVNTLFQVYKTISFWKVLKNTLVIELGRFFPW
                     MGGKRAIYRACLGMEIGEKTAIAYKVMPDLFFPEKIMIGENSIIGYHTTILTHEYLLS
                     EYRVGEVVIGRDVMVGANVTILPGTVIGDGAVIAAGAVVSVDVPAGSFAYGNPLIIKE
                     KATLT"
     gene            complement(12299..12952)
                     /gene="ppaX"
                     /locus_tag="U0308_000365"
     CDS             complement(12299..12952)
                     /gene="ppaX"
                     /locus_tag="U0308_000365"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrophosphatase PpaX"
                     /protein_id="HEM2315380.1"
                     /translation="MTGKITTLLFDLDGTLINTNELIIKTFQVTFQEFMPDRVFTRED
                     ILPFIGPSLMETFREINPAHADEMRAFYREYNLKHHDDLILEYDGVYEAIRALYEEDY
                     KLGIVSTKMYDTIMRGLKVTGLDKFFQVVIGLDQVSNAKPDPEGIEMALSLLNATKEE
                     AIMIGDNYHDIEAGKNAETLTAGVAWAIKGPEHLAQFQPDFMLEKMSDLLAIVRDEE"
     gene            complement(12996..13829)
                     /locus_tag="U0308_000366"
     CDS             complement(12996..13829)
                     /locus_tag="U0308_000366"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEM2315381.1"
                     /translation="MGNGVQPLDPVAIQIGSISVKWYGVIIASAVVIALLLALSEANK
                     RKMDKEIIVDLLIWAIPISIISARIYYVIFEWDFYKNNLGEIVKIWHGGIAIYGALIG
                     AVLTAIIFSRIKKISFWQLADVVAPSLIIAQAIGRWGNFMNQEAHGAETTRSFLESLH
                     LPDFIINQMYIDGAYYQPTFLYESLWNVLGFIVLLIIRRTKIRRGELFLGYVIWYSFG
                     RFFIEGMRTDSLMWGDFRVSQVLSLLLIVLSIGIIIYRRMKMNPPYYMEDKFGKVVKK
                     K"
     gene            complement(13915..14853)
                     /locus_tag="U0308_000367"
     CDS             complement(13915..14853)
                     /locus_tag="U0308_000367"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HEM2315382.1"
                     /translation="MTKSVTVKDLKERLNLELICSETGLERPISTSDLSRPGLELTGF
                     FSYYPEDRVQLFGMTEISFSEGMEPEERLKRYKQMCTKRTPAFVISRNLEVPKELVAA
                     AKEADIPVLRSRLKTTRLSVYITNYLESRLAPVISMHGVLVDIYGLGVLITGSSGVGK
                     SETALELVKRGHRLVADDNVEIRQEDEMTLIGSSPAIIEHLLEIRGLGIINVMTLFGA
                     GAVRSSKKITIVVHLENWDPDKHYDRVGLDQEKTKIFDMDIPKITVPVRPGRNLSVII
                     EVAAMNFRLKNMGYNAAEQFTQDLNNLIGHNSSMND"
     gene            complement(15040..15393)
                     /locus_tag="U0308_000368"
     CDS             complement(15040..15393)
                     /locus_tag="U0308_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEM2315383.1"
                     /translation="MRWIIGVIINSVLFVALSGFFTSFHVDGFTTALLASFILAILNM
                     LIRPILLLLTLPINIFTLGLFTFVVNAIMLEMTTFFIGDSFQIDGFGTALILAAIMAF
                     ANMIINSVLWGNKEK"
     gene            complement(15402..15602)
                     /locus_tag="U0308_000369"
     CDS             complement(15402..15602)
                     /locus_tag="U0308_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HEM2315384.1"
                     /translation="MKKLYKSSSQKMIAGVCGGLAEYFGIEVTIIRLLWAGAVLFFGT
                     GILLYILAAIIMPTATPESEWE"
     gene            complement(15626..16837)
                     /locus_tag="U0308_000370"
     CDS             complement(15626..16837)
                     /locus_tag="U0308_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HEM2315385.1"
                     /translation="MDKKLRRSRVDRKVGGVFGGLAEFLGIDATLLRLIYIIITIITM
                     KTGIAIIAYIVALFVIPSSDTSNEEVLERHRRRVEEKRNRHLGRNQARQEVREAMRNS
                     HHHRRPRPENAEPIHHGARKKEARPRPVREFNFDNATFRSFTIRVATGDVIIRSWDKE
                     QMKIRAVLAVHEKARSIRQLSEEKLWDYFFSQTMLDISPDNFTFESKNELLKTDLVVT
                     IPKRLYEQVKIQLLNGNLKYDDTAAEDAIIKTRHGDIRSSGASGKFLSTESADGEIFF
                     KRSTVENVDMSTAKGDIALQGSFLTTIAKAAQGDVEYILENDTSSASDLEAPNGDIRI
                     QIPPTWNVDGTLGTKKEKIYFDLKNAKIWDDAERTFVFTQNAEEISMATLQAKVGNGI
                     IKVSELETKNV"
     gene            complement(16904..18166)
                     /locus_tag="U0308_000371"
     CDS             complement(16904..18166)
                     /locus_tag="U0308_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 domain-containing protein"
                     /protein_id="HEM2315386.1"
                     /translation="MENERKRILELVKQGIISTEEALTLLENISKKEGKTAAKENIRR
                     SAAPREEEQVEEETKEEPSYDYSKGWNNQGNPYTPPKSRKRRPEPTPENHERDEEEGG
                     ENSSKDREDSMRNMVNDLSQAGEKIGSFLNSAFKQVKDMPFPFLTSTKIERDFIYHDT
                     TLSILEFEIANGNIEFKPSDSNDIKVHAMIKLFKEYPEDEALKIFFDKTTLRVDEETL
                     RFESKSKQIVTNLTVYLPRREYDYVSVKMLNGNFHMDELSGRDLFVKTTNGNISIGTL
                     NATLAEIESINGNVRIQNGEIRDVALKTFNGNVAVKGNYYSTNLQTKNGNVNYQLTGN
                     EATFLKAKTGAGNIDVVVPAAIGVDGRFHTNLGKLLLDLKDAEILESKTESVSKSIIF
                     TKLPDAADSSLKIEAEATTGSVKIRDVK"
     gene            complement(18375..21245)
                     /gene="uvrA"
                     /locus_tag="U0308_000372"
     CDS             complement(18375..21245)
                     /gene="uvrA"
                     /locus_tag="U0308_000372"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEM2315387.1"
                     /translation="MDKEKIVIQGARAHNLKNIDVEIPRDKLVVMTGLSGSGKSSLAF
                     DTIYAEGQRRYVESLSAYARQFLGQMDKPDVDLIEGLSPAISIDQKTTSRNPRSTVGT
                     VTEIHDYLRLLYARVGHPVCPNHGIEITSQTIEQMVDRVLEYPEKTRIQIMAPIVSGK
                     KGTHKKTIEEIKKEGYVRIRVDGEIYDINDEIEIEKNKKHSIEIIIDRIVIKEGINTR
                     LYDSIEAALRLADGYAVVDIMGDKELLFSEHYACPYCGFSVGELEPRMFSFNSPFGAC
                     PTCDGLGTKLEVDVDTVIPDRSLSLNEGAIIPWRPISSQYYPQMLASACKEFGIDMDT
                     PLEKLTKEELDIILNGSKDKEFYFEYKNDFGMTRETWIPFEGILPNIERRYRETNSDF
                     TRDQMAQYMTDLPCPSCKGYRLKEETLSVKVNNHHIGQISEFSINEALDFFDGLELSE
                     KETQIAAPIFKEVRARLGFLKNVGLDYLTMSRAAGTLSGGEAQRIRLATQIGSRLTGV
                     LYILDEPSIGLHQRDNDRLISTLQSMRDIGNTLIVVEHDEDTMMAADYLIDIGPGAGE
                     HGGRIVAAGTPEEVAKNKNSITGDYLSGKKFIPVPAKRRKGNGLELEIIGAKANNLKN
                     VNAKIPLATFSCVTGVSGSGKSSLVNEVLRKALARKLNRNHAKPGEHKEIKGIENLEK
                     IINIDQSPIGRTPRSNPATYTGAFDDIRDLFASTNEAKVRGYKKGRFSFNVKGGRCEA
                     CKGDGIIKIEMHFLPDVYVPCEVCHGKRYNGETLDIRYKGKNIAEVLEMTVEEGLEYF
                     TNQPRIARKLQTIVDVGLGYIRLGQPATTLSGGEAQRVKLASELHKRSNGKSFYILDE
                     PTTGLHADDIGRLLKVLQRLVEENGDTVLVIEHNLDVIKQADYLIDLGPEGGDGGGQI
                     IATGTPEKIARSKKSYTGKYLKPILERDKERTEERIATAKKK"
     gene            complement(21253..23229)
                     /gene="uvrB"
                     /locus_tag="U0308_000373"
     CDS             complement(21253..23229)
                     /gene="uvrB"
                     /locus_tag="U0308_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HEM2315388.1"
                     /translation="MKDKFELVSKYSPQGDQPRAIEQLVAGLKKGLKHQTLLGATGTG
                     KTFTVSNVIQEVNKPTLVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYV
                     PQSDTYIEKDASINDEIDKLRHSATAALFERRDVIIIASVSCIYGLGSPIEYGEMLVS
                     LRVGMEISRDQLLRKLVDIQYDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFG
                     DEIERIREVDALTGEIIGEREHVSIFPASHFVTRPDIMKKAIVNIKAELEDRLQVLRA
                     DNKLLEAQRLEQRTNYDLEMMEEMGYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQ
                     MVIDESHVTMPQIRGMFNGDQARKQMLVDHGFRLPSALDNRPLRLEEFEKHINQIMFI
                     SATPGPYELEKNPDVIEQIIRPTGLLDPIVEIRPIQGQIDDLMDEINDRVEKNERVLI
                     TTLTKKMSEDLTNYLKEAGVKVQYLHSEVKTLERIEIIRDLRLGVYDVIVGINLLREG
                     IDLPEVSLVAILDADKEGFLRSERSLIQTMGRAARNENGRVIMYADKMTDSMRNSIGE
                     TERRRKIQIEYNEKHGITPKTIKKEIRGIIAATSAADEREAVKQHDLSKMSKKERDVF
                     IEGMEHEMKEAAKALDFERAAELRDALLEIKAEG"
     gene            complement(23480..23719)
                     /locus_tag="U0308_000374"
     CDS             complement(23480..23719)
                     /locus_tag="U0308_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbA family protein"
                     /protein_id="HEM2315389.1"
                     /translation="MDQIISALIFPCLLVILFARITYNRYVALLLMVILIVASAKLGY
                     TNSMWLIIIDAFSMTIGFVLATYMLRRLKKSGSDF"
     gene            complement(23740..24387)
                     /locus_tag="U0308_000375"
     CDS             complement(23740..24387)
                     /locus_tag="U0308_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEM2315390.1"
                     /translation="MGIHQYFQSLSDLENIYRCPGKFKYQEHSVAEHSYKVTSIAQFF
                     GAVEEEAGNEVNWRALYEKALNHDYSELFIGDIKTPVKYATTELREMLSEVEESMTKN
                     FIEREIPETYQPIYRHLLKEGKDSTLEGKILAISDKVDLLYESFGEIQKGNPENIFVE
                     IYSEALATIYQYREMASVKYFLKEILPDMLAEKGIEKTELPQLTTEITTKALRDA"
     gene            complement(24409..24795)
                     /locus_tag="U0308_000376"
     CDS             complement(24409..24795)
                     /locus_tag="U0308_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315391.1"
                     /translation="MKKLSPMQKFIVIIGIIVMIIIAILAVVWNSNLTAVIGLSVVQF
                     IIIQFVCYVGIYSHMKVGTARGTKLFSWGILTTLLFSAIIFIFATDNFRTYSAAMIAL
                     IGYAAALMMREIENTNPANKKQKREE"
     gene            complement(24901..25206)
                     /locus_tag="U0308_000377"
     CDS             complement(24901..25206)
                     /locus_tag="U0308_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2315392.1"
                     /translation="MENAKQSLDEETLFSVTQIFKALSDPTRVQILNLLQDREYSVNE
                     IARTLAFNQTTVSHQLRFLKNLRLVKSRREGTTIYYMQDDNHVLELLTQAIRHVHHH"
     gene            complement(25474..26133)
                     /gene="phoU"
                     /locus_tag="U0308_000378"
     CDS             complement(25474..26133)
                     /gene="phoU"
                     /locus_tag="U0308_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEM2315393.1"
                     /translation="MVVRKIFTEQLNDLHQHLMEMGMLANEAIFKAVKSLVHRDTELA
                     KQVVAEDKAINNMELSLEQRSFELIALQQPVGMDLRKIVTVLKTSSDLERIGDHAVSI
                     AKTAILIGESKVLKPIPEIPEMGEIVKAMLQDVLKAYLAEDEVAARKIAERDNEVDKL
                     HKIVYQKCIHFMQEEPEHIEDVSQLLLVSQYIERIGDYVTNVCEWIVYLKSGEIEDLN
                     R"
     gene            complement(26146..26925)
                     /gene="pstB"
                     /locus_tag="U0308_000379"
     CDS             complement(26146..26925)
                     /gene="pstB"
                     /locus_tag="U0308_000379"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEM2315394.1"
                     /translation="MTTETAEKVEYIIETKDVDLFYGSKQALQKIALNIKKNQVTALI
                     GPSGCGKSTFLRTLNRMNDLIPNVKTTGEIHIGGENVQDPKIDMVNLRKKVGMVFQQA
                     NPFPFSIYDNVAYGPRMHGIKDKKVLDEIVERSLRQAALWEEVHDRLDRSAIGMSGGQ
                     QQRLCIARVLAVKPDVILMDEPTSALDPISTAKVEDLILELKKDYTIVIVTHNMQQAS
                     RISDETAFFLNGRIVEFADTTSIFTNPAEKETEDYISGRFG"
     gene            complement(26940..27755)
                     /gene="pstB"
                     /locus_tag="U0308_000380"
     CDS             complement(26940..27755)
                     /gene="pstB"
                     /locus_tag="U0308_000380"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEM2315395.1"
                     /translation="MLTKKPEINTILQATPDPHSLPAAMATEDLHVYYGDNHAIKGVD
                     LTFPENKVTALIGPSGCGKSTYLRALNRMNDEIDGCRMEGQILYDGININRKEVDLYN
                     VRKEIGMVFQKPNPFTKSIYENVAFGLKRHGMKNKKEIMERVEKSLRRAALWDEVKDD
                     LGKSALSLSGGQQQRLCIARAVAMQPKVLLLDEPASALDPISTSKIEDLINELKNKYT
                     IIIVTHNMQQAARVSDYTSFFYLGEVVEFSGTSELFTNPQQKQTEDYISGNFG"
     gene            complement(27783..28667)
                     /gene="pstA"
                     /locus_tag="U0308_000381"
     CDS             complement(27783..28667)
                     /gene="pstA"
                     /locus_tag="U0308_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEM2315396.1"
                     /translation="MNVKTKDKIATGVFYAIAVLIVIILAGLLGYILVKGVPQLSWKF
                     LTTPPQSFQAGGGIGPEIWNSFYMLVITMIISVPISLGAGIYMAEYARKNWITDLIRT
                     TIEVLSSLPSIVVGLFGFLVFVIQMGWSFSVISGALTLTIFNLPLLIRVVEEALNAIP
                     NTQREAGLALGLSRWETITRVLVPAALPAIITGVILAAGRVFGEAAALIFTAGQSTPI
                     LDFTDWNPVNPASPLNIFRPAETLAVHIWKINGEGIMPDAQAVSDGASAVLILSVLLF
                     NVLARLLGKFVYKRMTSS"
     gene            complement(28664..29587)
                     /gene="pstC"
                     /locus_tag="U0308_000382"
     CDS             complement(28664..29587)
                     /gene="pstC"
                     /locus_tag="U0308_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEM2315397.1"
                     /translation="MEAIKEKKLTQTSKKAHLETRGKIITFICISIMVIAAASILFFV
                     ISKGLATFTVNKVSFVDFITGTDWNPSQKDANGNPLVGALPMIIGSFAVTLFAACIAG
                     PLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVYGFIGLSVVVPFIRDHISGSGF
                     GIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLALGATRFQTIWKVVLRSSRSG
                     ILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSILTMGMGNTVMGTLDN
                     NILWSLAMVLLAMSLFFIIVIRFIGRRRKVK"
     gene            complement(29681..30589)
                     /locus_tag="U0308_000383"
     CDS             complement(29681..30589)
                     /locus_tag="U0308_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2315398.1"
                     /translation="MKKKYLGIVAMLAAVMLVFAACGSDSSSSDKANGSTKGDKEVSG
                     SLTAVGSTALQPLVEAASKEFINTNPKAQINVQGGGSGTGLTQVQQGAVEIGNSDVFA
                     EEKDGVDASKLVDHRVAVVGMAPVVNKDVGVKNITKQQLIDIFTGKTTNWKDVGGKDE
                     KITIINRAEGSGTRATFEKWGLDGKTPVKAQEQDSSGTVRKIVSETPGAISYLAFSYI
                     DASVVGLSLDGVEPTEDKVATNDWKIWSYEHMYTNGEPKGLTKTFLKYMTSDEVQNNI
                     VPQLGYQSIKSMKVERDASGKLTDVK"
     gene            complement(30845..32620)
                     /locus_tag="U0308_000384"
     CDS             complement(30845..32620)
                     /locus_tag="U0308_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEM2315399.1"
                     /translation="MKKLWLKIGLSFFILFFVVMVIVGVFSGELMKSTYLNMKENQLE
                     DDAKILLQTTNMENLDLDKDAATIQKSLDPLGEDIDARITVIDSKGDVVADTKKDPEK
                     LDNHMNRPEVTDILKKGESVGISIRESDSLGYSMLYVAVPVKHQGKTDGVLRISISLE
                     SVDAAVAKLWGNLALIFGIALVIIAAISVFIARKITRPVREIIEVSTDLANHKYDSRI
                     HGKISGELQDLSISVNTLAESLETQMFEIKQNEQRLNAIVQNLVSGVMLINVDKQVIM
                     TNRTMYQILGETEITGKPFYEVIKSFALSQLIEATFETKTIQQKEIILYFPREMILDA
                     SVSPILGENGEITGIILLLHDITQIRHLENVRSEFVTNVSHELKTPVTALKGFAETLL
                     DGAMYDEVLLKKFLTIIKEESDRLHRLIMDILALSRIEQNPVAENVELVDVDEVIEQS
                     ARTIFEMATEKNIRVTIPEKTSASVMIETDRDKLQQIVINLLSNAINYTPVDGKVEVK
                     LIEQEAEVIIEVTDNGIGIPAKDIDRVFERFYRVDKARSRHSGGTGLGLSIVKHLVEN
                     CGGRIEVESQEEVGSTFRVTLPKKA"
     gene            complement(32620..33330)
                     /locus_tag="U0308_000385"
     CDS             complement(32620..33330)
                     /locus_tag="U0308_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2315400.1"
                     /translation="MVKILVVDDEASIVTLLQFNIEKAGFDVVTAEDGRTGYELALSE
                     KPDLIVLDLMLPEMDGIEVTKKLRQDKVNVPILMLTAKDEELDKIIGLELGADDYMTK
                     PFSPREVVARIKAILRRTEGKAEIIEEITEDSEATILIGDLKILPDSYEVYLQDDLLD
                     LTPKEFELLLFLANHRGKVFSRDQLLDTVWNYDYVGETRIVDVHVSHLRDKIELDTKQ
                     PKYIKTIRGFGYKMENVK"
     gene            complement(33481..34656)
                     /locus_tag="U0308_000386"
     CDS             complement(33481..34656)
                     /locus_tag="U0308_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEM2315401.1"
                     /translation="MDVFVEILNGIGRLLLQPALYVGILLAILAGFNRVRWERKSFSI
                     SIYSPWLELKSFFGVSLLFGLAISVVTSLIGFGVMIEWVAIFNVVACFLLIVGMFRLS
                     STAFTIGITSLIFYFCYYFDVSLAPFTNEAFTYDSIFIDNFMISMTFLLAVLLFVEAF
                     LIQYTSAKNPSPSLRKSKRGKLIGSFQLRKLWFVPIVMFLPGDVFTKIFEWWPVFAIG
                     SQSYSLIILPLFIGFQQQVQTQLPEEASRKIAVEVTTLATIIAVAGLLGIVMPVLTLF
                     AFMFAVIGRFWISYRHYRSEKLAPKKFGPQPDGLVVLGARAATPSARLNLKAGEKITE
                     VNSRPVHTREELYEALNLNRAFCKLKVIDNAGEPRFEQTALYENESFELGLLLVEPR"
     gene            complement(34684..36132)
                     /gene="cls"
                     /locus_tag="U0308_000387"
     CDS             complement(34684..36132)
                     /gene="cls"
                     /locus_tag="U0308_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HEM2315402.1"
                     /translation="MGLLAYLLVILLILNVFFAAVTVFLERRDTSATWAWLLVLTFVP
                     IFGFIIYLIFGRKLSGKKIFDWKGQEKIGIQESTANQIEMIRQKEFPFSDPNVKKHRD
                     LIYLLLVNDGAILTQDNEVELFVDGHEKFDALIADIEKAKDHIHLIYYIFHSDELGNR
                     LMRVLERKAAEGLNVKIIYDAMGSRTTKKSFFRTFQKNGGLVRPFFPSKLPLINFRLN
                     YRNHRKLAIIDGDVGYIGGFNIGDEYLGASKKFGYWRDTHLRVHGKAVYAMQTRFIMD
                     WNSASSTHKIDYKARYFPTFHGKGHTSMQIVSSGPDSEWQQIKNGYIKMINAAKKTIY
                     LQSPYFIPDASLLEAIKIAALSGVDVRVMIPNKPDHAFVYRATTNYAGELMETGAKIF
                     IYDNGFIHAKTLVVDGEIASVGTANMDFRSFRLNFEVNAFIYEKQMVQKLEDAFLEDI
                     LKSYQLTPELYAKRSLWIKFKEAVSRLLSPIL"
     gene            complement(36256..37566)
                     /locus_tag="U0308_000388"
     CDS             complement(36256..37566)
                     /locus_tag="U0308_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEM2315403.1"
                     /translation="MLKKYGVVTILSLLVISAPLTGAHADTINDMQKRQNEIEQKKSE
                     LDKNIDSKNSELNHLESAEKDAAKELELLMKSLDATNKKLKEQEDKVSSENEKLKKLQ
                     KEMEKLRNDIRDRQKVLDNRARAIQTTGTATSYLDMIFEADDFKELVDRVTVVSAIVK
                     ADQNIMQDQKDDQDKLKVAESASQKKLENLKVLAVELEVSKNNMESQKQEKNDLVMAL
                     ANKKDLTKSEQTLLASEQGALTDEEKRLASNIAGEKAKQEAAIKAAEEKRMQEAAAAS
                     AKSSSVVKQQPSSDSSGATETVSSGGGQFIKPASGILTSGFSERTNPVTGKYESHKGQ
                     DIAGGGTVTVSAAASGTVVFSGFGASGSGFGGYGYVVKIDHGNGFQTLYGHMRAGSLK
                     VVTGQQVSQGQPIGIMGSTGQSTGQHLHFEIHKNGIPVDPAPYI"
     gene            complement(37686..38891)
                     /locus_tag="U0308_000389"
     CDS             complement(37686..38891)
                     /locus_tag="U0308_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEM2315404.1"
                     /translation="MKKNTFIAISLAAVISLTPAFTTNVFADVNTDIQNQDKKINDIK
                     SKKTDLQSDLSGLVADLEKAQEKAKSLQGEFDKTGKELKKLNEDIKSINERIKERETV
                     LKERARAMQKTSNSNAYLEVILDAENLSDLVGRVSAVNQLVDSDKSILEDQQNDEKAL
                     KTKQTAVKKKQEDQATAIHEYEAQQNKIEAQKAEKEAIVAQLASDQASAENAKAGLVS
                     ERDKAAKEATARATALREATSSNVGQESSSSATSTSSGKSNTTKNVASNDNNSAPSAA
                     TPSSGGYSAMIAAANAQLGKPYSLGATGPSAFDCSGFTSYAFRAAGVSLPRTSGGQYA
                     AASKISASQAKPGDLVFFNYGSGIAHVGIYVGGGQMINAQNNGVKYDNITSGYWAKYL
                     VGYGRVANF"
     gene            complement(38967..39851)
                     /locus_tag="U0308_000390"
     CDS             complement(38967..39851)
                     /locus_tag="U0308_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2315405.1"
                     /translation="MKFRTVGRHIRESFKSLYRNGWMTFAAASAVTVTLILVSVFFAI
                     LINMNKLATDVENNVQINVHISLSADKKQQQELEKNIEKIDGVDSVSFSSKDDELKKL
                     VGAYGKNFELFKQDNPLYDVFVVEAKEPTQTKTIAKKVEKLQYVDNVEYGEKTVDKLF
                     DTLKWGRYAGIILSIGLLLTAMFLISNTIKIAIFSRRREIEIMKLVGATNWFIRWPFV
                     LEGAWLGLIGSIVPVVLTFIGYVNIYNLVNPKLVTSSLSLLPPTPFAYQISGLIIAIG
                     VLIGIWGSVISIRRFLKV"
     gene            complement(39841..40527)
                     /gene="ftsE"
                     /locus_tag="U0308_000391"
     CDS             complement(39841..40527)
                     /gene="ftsE"
                     /locus_tag="U0308_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEM2315406.1"
                     /translation="MILMEDVYKKYPNGITAANGLNINIGEGEFVYVVGPSGAGKSTF
                     IKMIYREERATKGKIIVDKFDLINMKNREIPYLRRNVGVVFQDYKLLQSKTVYENIAY
                     AMEVVETEPSVIKERVMEVLDLVNLKHKVRMLPDELSGGEQQRISIARSIANMPKVLI
                     ADEPTGNLDPDTSWEIMNILEEISNRGTTIVMATHNKEIVNTLKHRVVAIENGRIVRD
                     EQQGEYGYEI"
     gene            complement(41034..41897)
                     /locus_tag="U0308_000392"
     CDS             complement(41034..41897)
                     /locus_tag="U0308_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM2315407.1"
                     /translation="MANKRKKQPLSPVVSKLIEYIYVIIGAALIALAFNVLLLPNHVA
                     SGGVSGISTIINYLTGWNPAFIQWAFNIPLFLAGLFFLGYQFGLKTFVGTMLLPFFVY
                     LTQGLEPWTHEPLVAALFGGVLVGMGLGIVFRGKASTGGTDVAAQILHKYSHLTLGIC
                     VALIDGFVVISAMFVFDIESGLYALVGLFATSKTIDLVQVGLNQSKTVFIISENQEAI
                     RQAILFKIDRGITRLSAKGGYTEDDKQILLCVIAQSEFSRLKEVIKEIDPEAFVVVMS
                     ASEVMGEGFTS"
     gene            complement(41903..43004)
                     /gene="prfB"
                     /locus_tag="U0308_000393"
     CDS             complement(join(41903..42931,42933..43004))
                     /gene="prfB"
                     /locus_tag="U0308_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959056.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEM2315408.1"
                     /translation="MELAEIRNELEKTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPN
                     FWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELEKDI
                     KAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGF
                     KVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS
                     VDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSE
                     RSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVK
                     DHRTNYETGNIQAVMDGDLDEFINAYLRSRIG"
     gene            complement(43089..45602)
                     /gene="secA"
                     /locus_tag="U0308_000394"
     CDS             complement(43089..45602)
                     /gene="secA"
                     /locus_tag="U0308_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEM2315409.1"
                     /translation="MAGLLKKIFESGKKDVKYLERKADEIIALADETAALSDDALREK
                     TVEFKERVQKGETLDDLLVEAFAVAREGAKRALGLYPFKVQLMGGIVLHEGNIAEMKT
                     GEGKTLTATLPVYLNALSGEGVHVVTVNEYLAHRDAEEMGVLYNFLGLSVGLNLNALS
                     STEKREAYACDITYSTNNELGFDYLRDNMVVYKEEMVQRPLAFAVIDEVDSILVDEAR
                     TPLIISGEAEKSTILYVRANTFVRTLTEEEDYTVDIKTKSVQLTEDGMTKGENYFDVE
                     NLFDLENTVILHHIAQALKANYTMSLDVDYVVQDDEVLIVDQFTGRIMKGRRFSEGLH
                     QALEAKEGVTIQNESKTMATITFQNYFRMYKKLAGMTGTAKTEEEEFRDIYNMRVIEI
                     PTNKVIIRDDRPDLIYTTIEAKFNAVVEDIAERHAKGQPVLVGTVAIETSELISSKLK
                     RKGIKHDVLNAKQHEREADIIKHAGERGAVVIATNMAGRGTDIKLGEGTIEAGGLAVI
                     GTERHESRRIDNQLRGRSGRQGDPGVTQFYLSMEDELMRRFGSDNMKSMMERFGMAED
                     AIQSKMVSRAVESAQRRVEGNNFDSRKQVLQYDDVLRQQREVIYKQRYEVINAENSLR
                     EIIEQMIQRTVNFIVSSNASSHEPEEAWNLQGIIDYVDANLLPEGTITLEDLQNRTSE
                     DIQNLILDKIKAAYDEKETLLPPEEFNEFEKVVLLRVVDTKWVDHIDAMDHLRDGIHL
                     RAYGQIDPLREYQSEGFEMFEAMVSSIDEDVARYIMKAEIRQNLEREQVAKGEAINPA
                     EGKPEAKRQPIRKDQHIGRNDPCPCGSGKKYKNCHGKEA"
     gene            complement(45833..46396)
                     /gene="raiA"
                     /locus_tag="U0308_000395"
     CDS             complement(45833..46396)
                     /gene="raiA"
                     /locus_tag="U0308_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HEM2315410.1"
                     /translation="MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNL
                     KVYSDKNAKVEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRD
                     KGAERDYFAYSDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFY
                     VYTDAETNGTNIVYSRKDGKYGLIETN"
     gene            complement(46591..47247)
                     /locus_tag="U0308_000396"
     CDS             complement(46591..47247)
                     /locus_tag="U0308_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEM2315411.1"
                     /translation="MTNCLLCFQPVRQSASWEISWLFEPLPICCDACLAGFEKLTGLL
                     CKNCSKESLDDVCEDCRSRTHFLDSNKSIYRYNDFAKDYMKKFKFQGDYEIGAIFKKE
                     LRNFLSEKKEKIVPIPVSEMRKVERGFNQTTAILKQSGILYEELLAKKHTEKQSKKTK
                     RERLASEQTFYFSGKEIYESTEVILFDDIYTTGSTLNLAAQILKEAGVYKVSALTIFR
                     "
     gene            complement(47240..48559)
                     /locus_tag="U0308_000397"
     CDS             complement(47240..48559)
                     /locus_tag="U0308_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM2315412.1"
                     /translation="MDIFPGRLYQEREIESKEGLREVVAIESNKCFRCGNTDVQLFGK
                     MSCALCKREDCIYCRNCIVMGRVNSCQKLYYQHARLLLETKEVLLRWEGALSAGQRKA
                     SNAIVVNLKAKTDMLLWAVAGSGKTEMMFEGMDWALRQGFRICVASPRVDVCLELLPR
                     LKEAFPSIDIVCLYGDSKDNYQGEQFVIATTHQLIRFYEAFQVIFIDEVDAFPYAKDP
                     FLEYAVMKARTKEGSTIIITATPEKKWQEECVRGKRNFVKIPGRYHRKKLPVPRTCWI
                     GPWKKNLAKGKITPKLIQWMNDVKKKDQPALIFFPEIDAMNKFANALENKGYASPVTV
                     HSADELRKEKVEWLRKGKIKLLLTTTILERGVTFTDVQVAVFGSEARIFTEAALVQIS
                     GRAGRKLSHPTGDVCFFHYGKTIEMKQAISHIQKMNQQGVIEGMLDD"
     gene            complement(48755..49606)
                     /locus_tag="U0308_000398"
     CDS             complement(48755..49606)
                     /locus_tag="U0308_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEM2315413.1"
                     /translation="MNEKIAVVTDSTTYLPNEVKEQLRINVVPLSVIIDGKSYREGEE
                     LSAADFYRKVKEAENFPTSSQPAPGDFIHLFEQLKEQGFDTVISIHLSSGISGTFQNA
                     ASAGELIEGLNVVAYDSELSCMAQGMFVVKAAEMALANEPLDQIIQKLDKIKQAQDAY
                     FMVDDLNNLQRGGRLNGAQALVGSLLQIKPILHFNDKQIVLFEKVRTQKKALKRIEDI
                     LQKAVQNKTAEKAYVIHGNDLAKGEAWLAQLEAKFPEVTFELSYFGPVIGTHLGEGAL
                     GLTWSIK"
     gene            complement(49627..50313)
                     /gene="degU"
                     /locus_tag="U0308_000399"
     CDS             complement(49627..50313)
                     /gene="degU"
                     /locus_tag="U0308_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DegU"
                     /protein_id="HEM2315414.1"
                     /translation="MALKIMIVDDHQLFREGIKRILELEDSFEVVAEAENGKNIVAKV
                     REYKPDIVLMDINMPTVNGLDATEMLVRQFPSIKVIVLTIHDTDEYVTEALRAGAVGY
                     LLKEMDAHELVEAVKIVDNGGAYIHPRVAIKLIREYRHLASTNTSQGVYGYQQPEVKM
                     PLHILTHRECEVLQLLTDGKSNRGIGETLFISEKTVKNHVSSILQKMKVNDRTQAVVT
                     AIKHGWVYIR"
     gene            50698..51333
                     /locus_tag="U0308_000400"
     CDS             50698..51333
                     /locus_tag="U0308_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEM2315415.1"
                     /translation="MLDHYLTIHSDGKHEIIIEKSRFICHIKRATTETEAQTFIQEIK
                     KEHRDATHNCSAYIIGENDQYQKAHDDGEPSGTAGVPMLEVLKKKSLKNVAVVVTRYF
                     GGTKLGAGGLVRAYGNAVSEAIQAIGIVECKLATIVECSFAYPLLGKIENALELKAYQ
                     IDKKEFTEKVVLHIFVDNDELQDFFNWITEISNGQLEYKEGPQKYREKDVT"
     gene            51335..51880
                     /locus_tag="U0308_000401"
     CDS             51335..51880
                     /locus_tag="U0308_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2315416.1"
                     /translation="MSTNVFIQLPDTILTKRTILKKTSIADATTLFDIWSDDEVAQFM
                     NIEKFSTILQAEEMIQAIENEPNACRYTIFTTDDSLHAIGSLGINDINKTNQTIEIGY
                     ELAKSHWRQGFMFEILTTFLTTVKPYLPYKVLTAKVLPDNVASIKLLKKLGFELTTTG
                     QELDLHSGRICEISNYRMLLK"
     gene            52056..53114
                     /locus_tag="U0308_000402"
     CDS             52056..53114
                     /locus_tag="U0308_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HEM2315417.1"
                     /translation="MSKGTDDSRRSSKKYKRRRKILFWILIPVMCLVLAGVGYGTYLF
                     SKTKLAADNSYDNVRNGKASTLRTNDIEPIKDSFSILIIGVDTSSTRAENGNPRSDSL
                     ILATFNVKDSRIEMTSIPRDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEF
                     KIPIDYYVRFDFDAFLKIVDALDGIDVDVPVDFTEQDSKDNAGAITLKKGPQHLNAEQ
                     ALALARTRHIDSDIERGKRQQLIIKSIVSEATSISSVSKYSDIIEVVGDNMKTNLTFN
                     QMLSIAKYGMTNKIDIKSLNLKGDSNPMDGIYYYKLDESSVQSISNEFADELGIKQPF
                     PGAAPYSDESSNTTSTSN"
     gene            complement(53152..54204)
                     /locus_tag="U0308_000403"
     CDS             complement(53152..54204)
                     /locus_tag="U0308_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl/decaprenyl-phosphate
                     alpha-N-acetylglucosaminyl 1-phosphate transferase"
                     /protein_id="HEM2315418.1"
                     /translation="MLIWSILISFAVGIIMVPIIRKFAFRINAVDTPRERHKHTKTTA
                     TLGGLAIFISFSVGMILAPIDKSGFLPIYFGALIIITTGFIDDIFDLSPKWKMLGQIL
                     AALCVTVWGDITINFINVPFYGQVDFGYFAIPLSIIWIVAIVNALNLIDGLDGLAGGI
                     SIIALMTIAGMALLLKDVFVAPVALILVAAVAAFLIYNFPPASIFMGDTGALFLGYMI
                     AVLSLMGFKNVTFISLLVPLIILGVPLSDTFFAIVRRLKERIPISSADRSHIHHRLMA
                     LGFTEKQTVLLIYCMALLFSMTGFVFSFSTTWGAMLLLLLLIFSIEIIVEFIGLIGED
                     YRPILNLLQKIHRKRK"
     gene            complement(54212..55336)
                     /gene="menC"
                     /locus_tag="U0308_000404"
     CDS             complement(54212..55336)
                     /gene="menC"
                     /locus_tag="U0308_000404"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HEM2315419.1"
                     /translation="MYFQEARLIHAELPLIAPFKTSYGELNSKDFYIIELVNEEGIRG
                     YGELEAFPLPDYTEETLGTAISIIKQHLLPILAQKEIRTPEEVNQMFSWIQGNEMAKA
                     AVELAVWDAFAKNEKLSLAKMIGAKKDSITVGVSIGVQHSAEALVQLVSQYMDEGYER
                     VKLKIAPKKDIQFVKAVREKFPNLSLMADANSAYNREDFLLLKELDHFNLEMIEQPFG
                     TKDFVEHAWLQKKLKTRICLDENIRSLDDLKQAHMLGSCQAVNLKLARVGGMSEALKI
                     ARYCSDNNLLVWCGGMLEAGIGRAHNIALAARAEFTFPGDISASNRYFNEDIVSPAFV
                     LNQGKLTVPTGQGVGVALDLDVLQKYTKSTERILLNKGWS"
     gene            complement(55337..56071)
                     /locus_tag="U0308_000405"
     CDS             complement(55337..56071)
                     /locus_tag="U0308_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HEM2315420.1"
                     /translation="MKKKEISILNIPFYNTTQAGFVEELYMAAKNGERRFVVTANPEI
                     VMHARTDKEFEAILGQADYIVPDGIGIIMASEKLGEPLKERVTGYDTMVGLLNKPLSC
                     YFLGAKPEISEVVEAKVREKFPQAVVCGVHHGYFDVLESEAIAKEILVAQPDVIFVAL
                     GSPAQEKWILSQIANFTKGIFIGVGGSFDVLTDSVKRAPKIWIKLRLEWVYRLLSNPS
                     RWRRFFAIPQFMLVIRKERKRLKKGE"
BASE COUNT        16555 a        12039 c         9046 g        18446 t
ORIGIN      
        1 tggttttttc gtgttatcct ttagacctct aaaaaagaaa ggactgaata cattgagaaa
       61 agttttcatg tttttaagca cagctttatt attagccatt ttgtcactaa gctttactgg
      121 tttagatctg aaggcaaaag ctgcttctga tttatatcca ctacccgctc caattattga
      181 tgttttccca gatgatggat tagccaaaga tatggctaga aacttaaaca aagactctgt
      241 gaatgatgtt attgatcaag atgatttgga tgcattaact agtttagggt ttgaaacaca
      301 tacgattacg aatgattcca tgcaattact agagcgtgcc atgtttaaca atgtcacaga
      361 tgtaagtatt atggaatttg gggctaaatt aacggagttc cctgatatta ctacaattcc
      421 acatttaaaa acgttatttt ttgctgattc acctggaaga ttaactagaa acttatccct
      481 tccaaactac caaaattatc ctgaaatgga taccattaca atgagcggaa ataatttagt
      541 cggctctatc cctgacttta ccgggatgcc tgctttaaaa cagctttata tgtctgatat
      601 gtcaattaca agcgatgaac ttcctaattt taataatatt cctttactta ttacgttgga
      661 tctaagttct aaccaattga caactattcc tgattttcaa aatataccaa atctcacatt
      721 tttagattta aatgcaaatt tattaaccaa tacaccagat tttcaaaatt tacctaactt
      781 aactgattta aatttaagac ataacaattt aaccggtaca atggttaact acaccaactt
      841 acctagttta gaatcattaa acttagatta taatttttta actgaactac cttctaatgt
      901 attagatact atttatgttc aaagtcaaaa tggagagctt cctgatcaaa ctattaatca
      961 gggcaataca tgtactattg atttacctat ttatttccaa atggaagaaa ttaacatgtt
     1021 agtcagccca gaagttacag gagaatatat cgggactaat atagtccaac ttccgacgac
     1081 agttaatgcg gaggacaact ctataacagt ggatacatcc gctctaagtc ctggtgagta
     1141 taaattagac atctcgtata atcacaatta tgccactgga ggcgtatgct cttatgattg
     1201 gaatgtaact attaattaat ttctactaaa aaagctggaa gttcaaaaac tctgaacttc
     1261 cagcttttta tttatttcca cgcgcgtgaa tattgttttg gtccttcaat tgtttcgcct
     1321 aattgtttgg ctgcatcttt agcaaaataa ggatttcgta ataattcacg accaacaata
     1381 attaaatccg ctcgttcatt gcataaaatt tcttccgctt gttcgcctcg tgtaataagc
     1441 ccaagcgctc cagtcgcaat acccgccccg cgacggattt catccgcgaa tggcacttga
     1501 taacctggga aaactggtgg agccacatta actaaaccac ctgtactcac atcaattagt
     1561 tccacgccat ctgctttcat ccattttgca aaaggaatat gatcttctag ttgcaaaccg
     1621 ccatgtgcat agtcagtagc ggatactcga acgataatcg ggccgtccca tacttccttc
     1681 actgctttaa taatatcact taaaatttta tatcgattgc cagcaggtcc accgtaatta
     1741 tcttcgcgac gattcgtaat tggtgataag aattggtgaa ttaaataacc atgagcagca
     1801 tgaatctcaa taacatcaaa tcccgcttct tttgcacgat aagcggcacg tttaaaatca
     1861 gccacaacct ctttaattgc ttctttcgta agctctactg gtttgtctga tttttcatca
     1921 aaagcaatag cagaaggagc cactatttca cctggtaaaa cagcttttct tccagcgtgt
     1981 gctaattgaa ttcctgcttt tgctccgtga taatgaagtc catctactaa ttttttcaaa
     2041 gctggaactt gctcgtcatt ccatagtcct aaatcaaatt cagaaatccg tcctacttct
     2101 tgaacagccg tagcttctaa gatgacaagc cctgtaccac cagcagctct cgagacatag
     2161 tgtgcaaaat gaaagtctgt tgcaatcccg tctttatttt ctactgaata catacacatt
     2221 ggtgacataa caattctgtt ttttagcgtt acatctttta atttatattc tgaaaataat
     2281 ttggacattc taattcgcat ccttttcttt ttaattaact attactgatt ttcagtccta
     2341 cttgtgctgg tgtttcccca cttctaaggc gctctgcaat ctgatctagt ttccggagac
     2401 gatgattaat acctgattta cttacttgac ctgttgtcag catttcgcct agctctttta
     2461 aggtaacatc ttcattagct atacgaagcg ctgcaatctc acgcagtcgt tctggtaaag
     2521 cttctagccc aacggttgat tggatatact tgatattatc gatttgccta acagccgcat
     2581 taattgtctt gttgagattc gccgtttcac agttcactag cctgttcacc gaattccgca
     2641 tatcacgcat aatccgaaca tcctcaaaat gaagaagcgc gctagttgct ccgataatac
     2701 tcaagaattc cgtgattttt tccgcttctt tcaaataggt aataaaacca tttttccgtt
     2761 caagcgttcg cgcattgaga tcgaattgat tcatcaaagc gcaaatcgcc tcattgtgct
     2821 cctcataaac agagaaaatt tctaaatgat aagaagaagt ttccggatta ttaactgacc
     2881 cacttgccaa aaaggctcca cgtaaataag cacgtttggc gctcctcttc ttaacaaatc
     2941 ccctatcaat cgatttcgta aacgtcatcg gtggctctag tatccgtaaa tcttccaaaa
     3001 tcccccgtgt acctgacttc aagcgaacta tataaacatt attttttttc aacttcattt
     3061 tgcgacgtac aagaagttct attggcactt cgtataagtc tttcagtaat tgatacattc
     3121 gtctagctat ggctgcattc tcggtttgga catccattat cactaattga ttcgaaaacg
     3181 agatggcacc attcattcga ataaaagctg cgagttccac ttttgcatcg ctatcactta
     3241 cgtccatatg ggttaattct ttcttggttt ccgatgcaaa tgacatggct tactcactcc
     3301 ttttcaatag tttggttagg taacatcgct aaaaccgcgt ccgccacctt ttcagcagca
     3361 tggcgcacaa ggccatcctc tgtagaaaga aaatcttgat aaatggcttc tacgccaagc
     3421 tcttccattc ctttggcatt atgctctact tgcgcaacat cctctgggaa taaaagttct
     3481 ttcggaacag tcgtcgtatt aattaacgtt ttatctataa aagattttcc cacatgctca
     3541 tggataactt taatatgatc cgcatctgag aaaaagtcgg tttcgccaat ttgcgttaaa
     3601 atgttcgtaa tgtatacttt cggagcctta cttgctataa tttcatcggc taattccgta
     3661 agtaatagat ttggtaaaat acttgtgtat aaacttcctg gaccaataac aatcaaatca
     3721 gcctctttca ctgcttcgac tgctgtcgga tatggtttta cattttctgg ttcgatatac
     3781 acacgattaa tatgctttcc ttgtaacggg ataagcgatt caccgtgcac aatagaacca
     3841 tcttccattt cggcatttaa gatgagtggt tgatccgttg ctggaataac tttgccgcgg
     3901 attttcagca ccgttgctag cacattaatc gcatcaacat aactatcatt caattgcgat
     3961 aaagccgtta aaatcaaatt tccaataaca tgccccgata aatcaccatc taccgcaaaa
     4021 cgatattgaa ataaatcgac aacccgtgga tcaacattgg ataaagctag catgacattg
     4081 cgtatatcac ctgggggaag cacatccatt tgctcgcgaa ttttaccaga actaccacca
     4141 tcgtccgcta cggtcacaat ggccgttaaa tgaatatcct tctttttaag cccttttaaa
     4201 atgactggaa gaccggtccc gccaccgatt actactactt taggtttcat ttcctttttc
     4261 atattaacgg ccctttctac gtttcatatc tcggtgtgaa atcgttgttt catatttttg
     4321 ttgaattgcc ttaccaacga actctgtcaa agctactgaa cgatgctgtc ctccagtaca
     4381 tccaatggca ataactaatt gtgtttttcc ttctcgtttg taaaaaggaa gtgtaaacat
     4441 taatagatct actaacttat ctaaaaaggt ctgcgtttct ggccatttca tcacatattc
     4501 atacacatct tcatcaagtc ctgtcaacgg acgcattttg tcaatgtaat gcggattcgg
     4561 taaaaagcgc acatcaaaca ctaaatcagc atcaatcgga atgccgtatt tgaaaccaaa
     4621 tgacatcaat tgcacattga atatatcttt atcttcggtt tggaattcat tgttaattcg
     4681 ctcgcgtaac tcacgtggcg ccatattcga tgtattaata actaactgcg aacggccttt
     4741 taaatcacta agcagttcgc gctctgcatt aatcccgtct agcacagacc cattaggctc
     4801 cagtggatgg tggcggcgcg tttctttata acgcgaaaca agtaccttat catcagcctc
     4861 taaaaagagg attttcgttg ttataaaatt ggtattatct agctcatcta gcgctggttc
     4921 aatggaatcg aaaaactcac ggccgcgaag atccattacg agcgcgattt tatccatttt
     4981 atcgctttct ttcattagct cccagaactt tggaagtaaa cttggcggta aattatctac
     5041 acaaaaataa ccgagatctt ctaaagactg cattgcgact gtttttcctg ctccagacat
     5101 cccagtaatg attactaatt ttaattgttt agaagccata tctgcctcat cctttcgcac
     5161 aaataatatc tatcttccat tttagcacac ttctcactag aaaatcccgg aaaagtctct
     5221 aaagcgagtt tccgggattt ttctttttaa gcttcgatat gttgcatcaa atcagctttc
     5281 actttttcta attttgttgc actttcttct ttactttcac cacgaatact aaagtagaat
     5341 ttgattttcg gttctgtgcc ggatggacgt aaacagaacc atgaaccatc ttcaaaataa
     5401 catttaatga catctgctgt tggcaaatga atcgcttccg tttttccggt agcaatccaa
     5461 gttgtttcgc ttcttaaata atcttccgca cgttccacgg ggaatccacc catacttgtt
     5521 ggtagttgct cgcgaaaatt acttgtaatt tctttgatgc gccgagaacc atccttaccg
     5581 cttaaagtta aggaaactag atcttctttg taatagccaa actcagcata aatttgctct
     5641 aaatcttcta gtaaacttcc accttctact ttgctaacga gcgccacttc cgcaatcgca
     5701 agcaccgctt gaatcgcatc tttatcacgc gtaaacggct taaccatata accattactt
     5761 tcttcataac caaattcaaa cgtatgcttg ccagtttctt caaagtgctt aatttgttct
     5821 gcaataaatt tgaaaccagt taatacttca atcatttccg caccgtaatg tttcgcgatt
     5881 tctgttccaa gattacttgt tacaatagat tttaataccg ctgcattagc tggcaattca
     5941 ttttgcgctt tcttttgttt taataaataa tgtaaaataa tcgcgccaat ctggtttcca
     6001 gataacactt catattcgcc gtcaagatta cgaactgcca cgcctaaacg gtcagcatcc
     6061 ggatctgttc cgactaaaat gtcgccacca aacttcttac catattcaat cgcaagtaaa
     6121 aaggcttcgc ggttttccgg gttaggcgat tttaccgttc caaaatcggg atcattcaca
     6181 aattgctcgt caaccttaac aatattcgta aagccaacac tttcaagcgc aggaacgcca
     6241 agaattccgc cagtaccatg aaggggcgtg aaaacaattt tcaaatcctc ccctcgttct
     6301 tgaacaagct ctttattgac aataacctct tttaattttt ccaaatatgg acggtctact
     6361 ttttcactga ttacctcaag taaaccattt tcaattaata gctcttggtt cgctacttct
     6421 acagaaaaaa tatcctctac cgcgtttatg tattcaatta cagcacttgc ccctgttgga
     6481 ggcatttgtc cgccatcttc accataaatc ttgtagccat tgtattctgg tgggttatgg
     6541 ctagctgtaa taacaatccc accaaacgca tttaaatgac gtactgcaaa ggaaagttcc
     6601 ggtgttggtc gaagcgcatc aaaaacatag cttttcacac catgatgccc taataccgcc
     6661 gccgattcaa aagcaaattc gcgtgacata tgacgagggt catacgcaat tactattccg
     6721 cgcttcttag cctcgtcacc gttctccgcc acaaattgcg ccaaacctag agaagcctta
     6781 cgaatagtat agatattcat gcggtttgtt ccagcgccta gtacaccacg catcccagcc
     6841 gttccaaatt ccatattacg ataaaaacta tcctcaagtt ctttttcatt tgcttccata
     6901 ttcgttaatt gttttcttaa tgtgctatct aatttgtcat tagcaaccca tttttgatat
     6961 tcttcttgcc aattcattct ctacactcct tcatttagaa ctctttaatt aaaatttatc
     7021 agctctccac tgtgaaacga aaagctgttc tagatgtaaa aggtttttct ggtcgaagta
     7081 caatatcacc aaatccgtca tggttaatcg catctactaa accctgtgtt tccattgtta
     7141 tgccagcata ttttggcaca gttcgctcgc caatctcaaa agagccatcc aaactattcg
     7201 ccgtataaat taataccgag tcagctttgg tttccatttc caagcgccgt cctgactttg
     7261 gatcaaacaa aactgcatct ggacgactat tttcatgttt taaaatgaat gcatgatcca
     7321 gccccgcacc aactaatttt acttgctggt cctgactttg tgtaatctcc gctacttcac
     7381 gacctgcacg caaatcaaag atagtatttt ccgctaaccg cttttcccca attgggagaa
     7441 actcttcatc aattggtagg aagctgtcac tattaaccca aagctgatgt tgtaaaaccg
     7501 ttgaaccagc ttctccgctt agattaaaat aaatatgatt gctcgggtta tatatagtcg
     7561 gctgatcgct tttcgcttca taatcaagca gccattcatt tttattattt aacgtatatg
     7621 tcatttttgc atcaatattt cctggatagc cattttctcc atccgcccag cagtattcaa
     7681 aagtcatcac aatttgatca agactttttt ctactgaaac atcccaaagc ttcttactaa
     7741 aattgaattt cccaccgtga cgatggttag ctccttcatt ttgaatcagt tgaaattgtt
     7801 taccgtccaa actaaattgc ccatttgtaa tgcgtccagc aacagggcca agtgtcgcgc
     7861 cgaagtatgg ggagtgtgcc aaataatcat ctaaatttgt aaaaccaaga ctaatattcg
     7921 caaaatcacc aaatttatct tttgtttcaa gggaagtaac aatcgctccg taatttaaaa
     7981 cactcatgcg cataccatga tcatttacca tcgtccactt ccaaacagtt tctccctcaa
     8041 actccccaaa tcgctccttc attacttcga taaaaatcac attccttcat aagttattaa
     8101 tagccatttg gatgagatac gtgccatttc caagcagtgg cgataatatc ttttacgtct
     8161 gtataagttg gctcccaacc aagaatttca cgcgctttat cacttgaagc aattaacgtt
     8221 cctggatctc ctgcacggcg tggtacaact tcagctggaa tttctttacc tgttacagta
     8281 cgagctgctt caagcatttc tttcactgaa aaaccgttac tgctaccaag gttgaaaata
     8341 ttactttccc cgccattttt caagtattct agcgctttaa tatgcgcgtc aattaaatct
     8401 tctacttgta cataatcacg aatacaagta ccatcaggcg tattgtagtc gtcaccgtaa
     8461 atcgctaatt tttctcgttg accaagcgca acttgtaaaa taattgggac taagtgtgat
     8521 tctggtttgt gatcttcccc aattgaacca tccgctttgg cgccagcaac attaaaatac
     8581 cggagtgcaa catatttcat atcatacgct ttatcgcacc atttcatcat tttttccatg
     8641 attagcttcg tttcgccgta agtactttcc ggatttgttg gcatatcttc cgtaatcggt
     8701 actcgttctg gctcaccata tgttgcagcg ctagaagaaa agacaatatg cttcacacca
     8761 aattgctcca tcacttctaa gacaatttgc gtaccataaa cattattatt taaataaaca
     8821 agcggtactt ccatcgattc tcctacaagt gaactagcag caaagtgaat cacaccatct
     8881 accttttctt tttcaaaaac tgaacttaaa aatgccttat ctcgaatatc tccttcataa
     8941 aattttgcct ttgtatgaat ggattccttg tgccctgttc ttaaattatc aataactact
     9001 acttcatatc cgcgagtaat taactcatct actgcatgtg aaccgatata gccagcgcca
     9061 ccaagtacaa caatactcat tattatctct ctcctaacaa tagtctttgt cttccatttt
     9121 acactactca agtctatata gtcacgcaaa aatgggtcta agataaataa tctcagaccc
     9181 attcgagttt tctttactgt tatttagctg cctctgcttc tagcgactct tttaattctt
     9241 ctacatattt ttgagcgttt tgtccagcaa gtccgccatc gcctgttgct gttacaattt
     9301 ggcgtaagct tttcgcacga acatcaccag ctgcaaaaat accaggaagg tttgtacgca
     9361 tttcctcgtc cgttacgatg tatccttcat catctgtaat acctaaattt aagaatgctt
     9421 tcgtaagtgg aacaagtcca acatagatga aaacaccatc cactggcata atagattcgg
     9481 aaccatccac tgtggaaaca agttttgctc cagttacttt tttgccatcg ccaacaattt
     9541 cttctactgt actattccaa atgaaatcaa ctttttcatc tttgaaagca cgatcttgta
     9601 aaatttgttg tgcgcgcaat ttatcacgac ggtgtactat cgttacttta tctgcataac
     9661 gagtcaaata agttccttct tccactgcag agtctccgcc gccaaccacg attaattcgc
     9721 gatttttgaa gaaagctcca tcacaaacag cacaataaga aacgccgcgt ccactaagct
     9781 cttcttcgcc agctgcacca agtttccggt gttcagcacc agtcgcaata ataatcgccc
     9841 gagctttata ggttttcgat ccagccgtta cagttttaaa ttctttgcca tcaacgactt
     9901 ctttaatgtc cccataagca tactcagcgc caaattgttt cgcaccgcta agcatcttat
     9961 cggataaatc tggtcctaaa atactatcaa atccagggta attttcaacc tcagctgtgt
    10021 taaccatttg tccgccgggt actccgcgtt caatcattaa cgtatctaaa tctgcacggg
    10081 aagtatataa agcagctgtc attccagctg gtcccgctcc aataataatc acatcataaa
    10141 ttttttcttc actagccatt ctttttgccc tcctcgttta tgtgtataca atagttagcc
    10201 taaattaatc ctaatacgga atagcaaaaa ggtctattta tctgctcaga actcgctcaa
    10261 tatctcgcgc acatttacta cattcaaatt cttctactaa ttcaagcttc aaatgaggta
    10321 aaaacagctt agcaatcgca ctagccacag tttctatcgt ataacgacca agtattaaat
    10381 ctttcccagc atctattaaa actaacgaaa acatctgctt atataacgcc atattttctt
    10441 catttaacaa aacaccattt tcttttaaaa taatcatcgc ttttgcaatc agataaccat
    10501 tttgttcaat agccccatcc ggaaaataat caaaattagt aaacattaaa tgctccatgt
    10561 aagaccaatc gctcatatca agtaacgggt ggaataatac taactccgga cgatttccag
    10621 aaatagttaa tgcataaaca cctagcatat gagtcaaatc atcttcctct tgaagcatct
    10681 caagcaccag tcgcgtgtca ttcgttaaat ccgcctcttg ctcccacgga aaccgaacat
    10741 cttcatacaa atcacactct aaaaaggaat gccaaaacat ttttgcccct tccacatccc
    10801 ctaaataata ggaagatttc gcacggaaat aataatactt actacgctca gtcacttcca
    10861 agtcagccac ttgttcaagc aaatcatccg cttcctcgta ttcacccatc atcgcatgaa
    10921 tcagaccaag cttctcttta tgatgcgcta gaaccggtag gacatcccga agttccagat
    10981 aaagctcatc cgcctcttta cggttcccct tataaaagtg ataaataaat aaatcacaaa
    11041 tacccaagag attacccgga tttctcgata ataaatcact taaaactctg acgccctctt
    11101 cttctttcaa ttgctcaaaa taaagcgaag cgagttgatt ataagcaggc caaaaattcg
    11161 gtttttcatc aatgactttt cttaaaatat cgcaagcagc tgcactatct tcttctgcta
    11221 aataacgatt aatttctttt ttataagaat agaattcttg ttctaattta gaaaagccat
    11281 tttcaattgt ctcaccaaaa ggcgtttctt ctaataaaac ttcaattaaa tctttagctt
    11341 cctcggtata ttcaccatca gttgaactat ccaaataacg attagcatat tgtaacgctc
    11401 tccgataatc tttcatatac gcaaaattat tagcaataaa ataataacag tattccatgt
    11461 tcccattacg ctgttctaaa acttctctaa gtagctgatt cgatttatgg aattgaccaa
    11521 tttctgtata acatatcgcc agctgacaaa gaataacagc ttctcctggc tccagttcgg
    11581 atgcccgcac taaatacctg attgcttctt taattctttg atcacgaaac gcttcgacac
    11641 cgcgttcaaa ataaaactga ccatttggat aaaatggata gatttttgcg ggtgtttttt
    11701 tgtctttttc catttttcca cctccaagat acctttatcc taatgagtat aacatagaat
    11761 ttatgacttt gggcgacaaa aaaagctact ttgactttta cgtcagagta gctttttctt
    11821 ttattattaa tggatttcca taagcaaaac taccagccgg gacatccacc gagacaaccg
    11881 ccccagcagc aatcacagcc ccgtctccaa ttactgtgcc cggaagaatg gtgacattcg
    11941 cgccaaccat cacatcccga ccaatcacaa cttccccaac acggtactcc gaaagtaaat
    12001 attcatgcgt caagatagtt gtgtgataac caataattga gttttcgcca atcataatct
    12061 tttccggaaa aaataaatcc ggcataactt tataggcaat ggcagtcttc tcgccaattt
    12121 ccattccaag acatgcgcga taaattgcac gcttaccgcc catccatgga aaaaaacgac
    12181 caagttctat tactagcgta ttcttcaaaa ccttccaaaa agaaatcgtt ttatacactt
    12241 gaaaaagggt gttgactgta tcatcgggtg ccttaaacct atccagccgc ctcaaattct
    12301 attcctcgtc cctaacaatt gcgagtaaat cgctcatttt ttctaacatg aaatctggct
    12361 gaaactgcgc caaatgttct ggtcctttaa tcgcccaagc tacacccgcg gttagggttt
    12421 ccgcattttt tccagcttca atatcatgat aattatcgcc aatcataatc gcttcttctt
    12481 ttgtcgcatt taataaagaa agagccatct caataccttc aggatctggt ttagcattag
    12541 acacttgatc taacccaatc accacttgga aaaatttatc caagccagtt accttgagac
    12601 ctcgcataat cgtatcatac attttcgtcg atacaattcc aagtttataa tcttcttcat
    12661 ataaagcacg aattgcttca taaactccat catattctaa aattaaatca tcatgatgct
    12721 tcaaattata ctctcggtaa aaagcgcgca tctcatctgc atgcgctgga tttatttccc
    12781 ggaaagtctc cattaaagaa ggcccgataa acggtaaaat gtcctctcta gtaaaaaccc
    12841 ggtccggcat gaattcttga aatgtcactt gaaatgtttt gataatcaat tcattcgtat
    12901 ttataagcgt accatctaag tcaaacaaca atgtagtaat tttcccagtc ataatttctt
    12961 cctttcttaa tcaaactcga aaatctccaa cttttttatt tctttttaac tactttacca
    13021 aatttatctt ccatataata tggtggattc attttcatac gacgataaat aataatacca
    13081 atagacaaaa caataagaag taaagatagc acttgcgaaa ctctaaagtc cccccacatt
    13141 aagctatctg tccgcattcc ttcaataaag aatcttccaa atgaatacca aattacatag
    13201 ccgaggaaca actccccacg acgaattttt gtgcgacgaa taattaatag aacaataaat
    13261 ccaagcacat tccataaact ctcatataag aaagtcggtt gataataagc accatctatg
    13321 tacatctggt tgataataaa atctggtaaa tgaaggcttt ccagaaaaga acgcgttgtt
    13381 tctgcaccat gagcttcttg gttcatgaag tttccccaac gcccgattgc ctgcgcaata
    13441 atcaaacttg gcgcaacgac atccgcaagt tgccagaacg aaattttctt aatccgcgag
    13501 aaaataattg ccgttaaaac tgcaccaatt agcgcgccat aaatagcaat acctccgtgc
    13561 cagattttca ctatttcgcc taaattattc ttatagaaat cccactcaaa aataacatag
    13621 taaattcgag cactaataat tgaaatcgga attgcccata tcagcaaatc cacaataatt
    13681 tctttatcca ttttgcgctt gtttgcttca cttaaagcaa gaagtaacgc gatgacaaca
    13741 gccgaagcaa taataactcc gtaccatttc acagatatac taccaatttg aatcgccacc
    13801 ggatcaagtg gctgaacacc attacccata attcccctac tttcaaaaag acaactccgc
    13861 aaccaaacaa gcatttttgt aaagtttggc tgcggagatg ctttcactat ttatttaatc
    13921 attcatactg ctgttatgac ctattaaatt attcaggtct tgtgtaaatt gctctgccgc
    13981 gttgtacccc atattcttta atcggaaatt cattgccgct acctcaataa taacagataa
    14041 atttcgtccc ggtcgaacag gcaccgtaat tttcggaata tccatatcaa agatttttgt
    14101 cttttcttgg tctaatccga cacgatcata atgcttatca ggatcccaat tttcaaggtg
    14161 cacaacgata gtaatttttt tactagaacg aacagctcct gctccaaata aagtcattac
    14221 attaataatc cccaacccgc gaatctcgag taaatgttca ataattgctg gagaagaacc
    14281 aattaacgtc atttcatcct cttgacgaat ttctacgtta tcatctgcta caagtctatg
    14341 cccgcgtttt acaagctcca gtgctgtttc acttttacca acaccactgc tccccgtaat
    14401 caacacacct aaaccatata tatccactag aacaccatgc atcgaaataa ctggcgcaag
    14461 tctgctttct aagtaattcg taatataaac agataaacgt gtcgttttaa gtcgtgaacg
    14521 taataccgga atatcagctt ctttcgctgc tgctactaat tctttcggca cttctaaatt
    14581 tctagaaatc acaaaagcag gcgtccgctt cgtacacatt tgtttatatc ttttgagacg
    14641 ttcttcaggt tccattcctt cagaaaacga tatttcagtc atgccaaaaa gttgcacacg
    14701 atcttctgga taataagaga aaaacccagt aagttccagc cccggccgag ataagtcact
    14761 tgttgaaatt ggccgttcaa gtcccgtttc cgaacaaatt aactctaaat taagtcgttc
    14821 ctttaaatcc tttaccgtaa ccgattttgt catgcaagta cctccaaatg aattataaaa
    14881 gtccattact gttcgctaca aaatattatt tagaaagctc cttctcattt tagcacttta
    14941 gaaggaatca agctacctct ttctactcaa atggctctac atagcaaaac cagctacatt
    15001 taaaagacta tttttagcct caaaatgtag ctggaatgtt tatttttctt tgttacccca
    15061 taaaacggaa ttaataatca tgtttgcgaa tgccataatt gctgcgagaa ttaacgctgt
    15121 tccaaaacca tcaatttgga aagaatctcc aataaagaag gtagtcattt caagcataat
    15181 tgcattcaca acaaaggtga aaagtccaag tgtgaaaata ttaattggta atgttaaaag
    15241 gagtaaaata ggtctaatta gcatatttag aattgctaat ataaaactcg ctagtagcgc
    15301 tgtcgtgaat ccatctacat gaaaacttgt aaagaatcct gataaagcta cgaaaagcac
    15361 cgagttaata attacgccta taatccaacg catgttttag ttcactccca ttctgattca
    15421 ggtgttgctg ttggcataat aatcgcagct agaatataca gtaaaatccc agtaccaaag
    15481 aatagaactg ctccagccca aagtaaacga atgatggtta cttcaatgcc aaagtattct
    15541 gcaagcccac cacagacacc agcaatcatt ttttgtgatg aagatttata taactttttc
    15601 attgttttcc cttcctttca ttttattaaa cgttctttgt ttccagttca gaaactttaa
    15661 taattccatt tcctactttt gcttgaagtg tcgccatgct tatttcttct gcgttttgag
    15721 tgaagacaaa agttctttct gcgtcatccc aaatttttgc attttttaag tcaaaataga
    15781 ttttttcttt tttagttcca agtgttccat cgacattcca tgttggcgga atttgaattc
    15841 gaatatcgcc atttggtgct tctaaatctg aggccgagga agtatcattt tcgagtatat
    15901 actcaacgtc cccttgtgca gctttagcaa tcgttgtaag aaagctacct tgaagcgcaa
    15961 tatctccttt agcagtagac atatctacat tctctactgt gctacgtttg aagaaaattt
    16021 ctccatccgc tgattctgtg ctcaaaaatt taccactagc tcctgatgag cgaatatcac
    16081 cgtgacgtgt tttaataata gcatcttcag cagctgtatc gtcatatttc aaattaccat
    16141 ttaagagctg aattttcact tgctcgtata aacgttttgg aatagtaaca actaaatcgg
    16201 tttttaaaag ttcatttttt gattcgaaag tgaaattgtc cggagaaata tcaagcatcg
    16261 tttgactaaa gaagtaatcc catagttttt cttcgcttaa ttgacgaata gatcgcgctt
    16321 tttcatgtac agctagtact gcacggattt tcatttgttc tttgtcccaa gaacggataa
    16381 taacgtcccc ggtcgccact ctaatagtaa aggaacggaa agtcgcatta tcaaaattga
    16441 attctcgtac tggacgaggg cgagcttctt tcttccttgc gccgtgatga attggttcag
    16501 cattttctgg tcttggtctt ctatgatgat gactatttct cattgcttct cgcacttcct
    16561 gtctagcttg attacgtcct aggtgacgat ttcttttttc ctccacgcgg cgacgatgcc
    16621 gttcaagtac ttcttcatta cttgtatcgg aagaaggaat cacaaacaag gctactatat
    16681 aagcgataat cgcaataccg gttttcatcg taataatggt gatgataata taaattagtc
    16741 gcagaagtgt ggcatctatc cctagaaact cagctagtcc accaaacaca ccgccgactt
    16801 tccggtccac tcttgatctt cttaattttt tatccatgtt agctcttcct ttcttatatc
    16861 tatgtaaaat ctagcgcgca ttccggcgct agatttcgtt taattatttt acatcgcgaa
    16921 tttttacgga gccagtagtt gcttctgctt cgattttcaa ggaagaatca gctgcatctg
    16981 gtagtttagt gaaaataatt gatttactta cggactctgt tttagattca agaatttcgg
    17041 catcttttaa atctaaaagt aatttaccta agtttgtgtg gaaacggcca tctacaccaa
    17101 ttgctgcggg tacaaccaca tcgatattac ctgcaccagt ttttgctttt aagaaagtag
    17161 cttcatttcc agttagttga taatttacat taccattttt agtttgtaaa ttggtggagt
    17221 aataattacc ttttactgct acgttaccgt tgaatgtttt cagtgcaaca tcacgaattt
    17281 caccattttg gatacgaaca ttaccattaa ttgactcaat ttctgccaaa gtagcattta
    17341 aagtaccaat actaatatta ccattggttg ttttcacaaa taaatcacga ccggataatt
    17401 catccatatg gaagttacca ttaagcattt taacggaaac ataatcgtac tcacgacgag
    17461 gcaagtatac agttaagttt gtaacgattt gttttgattt agactcaaaa cgtaaagttt
    17521 cttcatctac acgtaaagtt gttttatcaa agaagatttt aagtgcttca tcttctggat
    17581 attctttgaa tagtttaatc atcgcgtgaa ctttgatatc gttcgaatca gatggtttaa
    17641 attcaatatt accattagca atttcaaatt ctaaaataga aagtgttgtg tcatgataaa
    17701 tgaaatcacg ttcgattttc gttgaagtta agaacgggaa tggcatatct ttcacttgtt
    17761 taaatgcact atttaggaaa gaaccgattt tttcacccgc ttgggataaa tcattaacca
    17821 tattgcgcat ggagtcttca cgatctttag aagaattttc gccgccctct tcttcgtctc
    17881 tttcatgatt ttctggagtc ggttctgggc gtcttttacg actttttgga ggtgtataag
    17941 ggtttccttg attgttccaa cctttactgt aatcgtatga tggttcttct tttgtttctt
    18001 cttcgacttg ttcttcttct ctcggagccg cagaccgacg aatattttct tttgctgctg
    18061 ttttaccttc ttttttggaa atattttcaa gtagagtaag ggcttcttca gtggatataa
    18121 taccttgttt tactaattcg agaatacgtt tacgttcatt ttccattttc atttcctcct
    18181 ataatttagg ctaaactatt ttaggcttgc tttcacatgc aagtgacata tctgttttat
    18241 ctatgactct attatgaagg aaaatataat ttctgtcata caaccagagg atgattattt
    18301 gtttggactt tgggtggttt gttcttaagg actattaaaa accccgctta tgttttgcat
    18361 aagcggggtt ttgattattt tttcttggct gttgcgattc gttcttctgt gcgttcttta
    18421 tcgcgttcta aaattggttt caagtattta cctgtatatg attttttcga gcgagcgatt
    18481 ttttcaggtg tgccggttgc aataatttga ccgccaccat cgccgccttc tggtcctaaa
    18541 tcaatcaagt aatccgcttg tttaattacg tcaaggttat gctcaataac aagtactgtg
    18601 tcgccatttt cttctacaag tctttgtaat actttgagta aacgaccaat atcatctgcg
    18661 tggagaccag tggttggttc atcaagaata tagaaagatt ttccgttact acgcttgtga
    18721 agttccgaag ctagcttaac acgctgtgct tcaccaccag aaagagtcgt agcaggttgc
    18781 ccaagtcgaa tataaccaag tccaacatcc acaatcgttt gcagtttacg tgcaattctc
    18841 ggttggttag tgaaatattc taggccttct tctacagtca tctctaatac ttcagcaata
    18901 tttttgcctt tgtaacgaat atctaacgtt tcgccattgt atcgttttcc atgacaaact
    18961 tcacagggta catatacatc gggcaagaaa tgcatttcaa ttttgatgat tccgtcgcct
    19021 ttacacgcct cacaacgtcc accttttacg ttaaaactaa agcgaccttt tttataaccg
    19081 cgaactttgg cttcatttgt gcttgcaaaa aggtcacgaa tatcatcgaa agcccctgta
    19141 taagtagctg gattcgatct cggtgttctt ccgattggtg attgatctat attgatgatt
    19201 ttttctaggt tttcgatacc ttttatttct ttatgttcac ctggttttgc gtggtttcta
    19261 tttagttttc tcgctaatgc ttttcgtaat acttcattca ctagcgaact tttacctgaa
    19321 cctgaaactc cagttacaca agaaaaagta gctagtggaa tttttgcatt tacgtttttg
    19381 agattatttg ctttagcacc aataatttct aattctagtc cgttaccttt tctacgttta
    19441 gcaggaactg gaataaattt tttacctgaa agatagtcac cagtgatgga atttttattt
    19501 ttggcaactt cttctggagt tccggctgca acaattcgtc caccgtgttc ccctgcacct
    19561 ggaccaatat caataagata atctgcggcc atcatcgtat cttcgtcatg ctcaacgaca
    19621 ataagcgtgt ttccaatgtc acgcatactt tggagtgtgc tgattaaacg gtcattatct
    19681 cgttgatgaa gaccgatgga aggttcatct agaatataaa gtaccccagt aagtctggaa
    19741 ccgatttgtg tagcaagtcg aattcgctgc gcctcaccac cagatagcgt cccagctgca
    19801 cggctcattg ttagatagtc gagcccaaca ttttttaaga agcctagtct agcacgaact
    19861 tctttgaaaa tcggcgctgc aatttgtgtt tctttttcag agagttctaa gccatcaaag
    19921 aaatctagtg cttcattaat agaaaactca ctgatttggc caatatgatg attgtttact
    19981 ttaacagaaa gtgtttcttc ttttagacga taacctttac aagatggaca tggtaaatca
    20041 gtcatatatt gcgccatttg atcacgcgta aagtcggaat ttgtctcacg atagcggcgt
    20101 tcgatatttg gaagtatccc ttcaaaagga atccacgttt cgcgtgtcat tccaaaatca
    20161 tttttgtatt cgaagtagaa ttctttgtct tttgatccat ttaaaataat atctaattct
    20221 tctttcgtta gtttctccaa aggtgtatcc atatctattc cgaactcttt acaagccgaa
    20281 gctagcattt gtggatagta ttgcgagcta attgggcgcc aaggaataat agcaccttca
    20341 tttagagaca gacttctatc tggaataact gtgtcgacat cgacttcaag tttagtgcca
    20401 agtccatcac atgttggaca agcgccaaat gggctattga aagagaacat tcttggttct
    20461 aattcaccaa cggaaaaccc acaataaggg cacgcatagt gttcactaaa taataattct
    20521 ttatcgccca ttatatcaac aaccgcataa ccatcagcta aacgaagagc cgcttcaatg
    20581 gagtcataca aacgagtatt gataccttct ttaatcacaa tgcgatcaat aatgatttca
    20641 atagaatgct ttttattctt ctcgatttca atttcgtcat tgatatcata aatttctcca
    20701 tcaacacgaa ttcgaacata gccttctttt tttatttcct caatagtttt cttatgggtt
    20761 ccttttttac cagaaacgat tggagccatt atttgaatac gtgttttttc tggatattct
    20821 agaacgcgat ccaccatttg ttcgattgtt tgggaagtga tttcaatacc gtgatttgga
    20881 caaactggat gcccaacacg agcataaagt aagcgcaaat agtcatggat ttctgtgaca
    20941 gtaccaacag ttgaacgtgg attacggctt gttgtttttt gatcaatcga aatggcaggg
    21001 cttaatcctt caattaaatc tacatctggt ttatccattt ggcctaaaaa ttggcgcgca
    21061 tatgcggaca aagactctac ataacgtctt tgtccttctg cgtaaatcgt atcaaaagca
    21121 agcgaagatt tacctgaacc tgaaagtcca gtcataacta ctaatttgtc tctaggaatc
    21181 tctacatcaa tgttttttaa gttatgggct cttgcaccct gaattactat tttctcttta
    21241 tccaatttcg cttcatcctt ccgcttttat ttccagtaaa gcatcgcgaa gttcagcagc
    21301 acgttcgaaa tcaagtgctt tggctgcttc tttcatttca tgttccatac cttcaatgaa
    21361 cacatcgcgt tctttcttag acattttgct taaatcatgt tgcttcactg cttctctttc
    21421 atctgcggca gaagtcgctg cgatgatacc acgaatttct tttttgattg tttttggcgt
    21481 aatgccatgt ttttcattat attcaatttg gattttacga cggcgttctg tttcgccaat
    21541 agaattgcgc atcgaatcgg tcattttatc agcatacatg attactcgac cgttttcatt
    21601 acgagcggct cgacccattg tttgaattaa ggaacgctcg gaacgaagga atccttcttt
    21661 gtccgcatct aaaatagcga caagagatac ttcaggtaaa tcgattcctt cgcgaagtaa
    21721 attaattcca acgataacat catacacacc aagtcggagg tcgcgaatga tttcgattcg
    21781 ctctaacgtc ttcacttccg agtggagata ttgtacttta acaccagctt ctttgagata
    21841 attggtcaaa tcctctgaca tttttttcgt taaagtggtg attaaaacac gttcgttttt
    21901 ctcgacacga tcattaatct catccattaa gtcatcgatt tgtccttgaa tcgggcgaat
    21961 ttctacgatt ggatctagca agccggttgg tcggatgatt tgttcaatga catccggatt
    22021 tttttctagt tcataagggc ctggtgtggc ggaaatgaac ataatttgat tgatatgttt
    22081 ttcaaattct tctaatctta gcggacggtt atctaaagca cttggtagtc taaaaccatg
    22141 atcaactagc atttgttttc tggcttggtc accgttaaac ataccacgga tttgtggcat
    22201 cgtaacgtgt gactcatcaa ttaccatttg gaaatcgtct gggaagtaat cgagtaacgt
    22261 gtatggtgta actcccgctg gacgaaggga taaatgtcta gaatagttct caataccaga
    22321 gcaataaccc atttcttcca tcatttctaa atcataattc gtccgttgtt caaggcgctg
    22381 agcttcgagt aatttattat ctgcacgtaa aacttgaagg cggtcttcga gttccgcttt
    22441 tatattaaca attgcttttt tcataatatc aggtctggta acaaagtgag atgccgggaa
    22501 aatggaaaca tgttctcttt ctccaataat ttcgccagta agtgcatcta cctctctaat
    22561 acgttcaatt tcatcaccga aaaattcaat cctcatgcag tgctcgtctc ttgatgccgg
    22621 gaaaatttcg acaacatcac cgcgaacacg gaagcgtcca cgttgaaaat ctatatcatt
    22681 tcgatcatat tgaatgtcta ctaatttacg cagtagctga tcacggctaa tttccatacc
    22741 aacacgaagc gaaacgagca tctctccata ttcaatcggc gaacctaagc cataaataca
    22801 cgatacactc gcaatgataa ttacatcacg acgttcaaaa agcgcagcgg tagcagagtg
    22861 acgaagctta tcaatttcat cattgatact tgcatctttt tcgatatacg tgtcgctttg
    22921 cggaacatag gcttctggtt gatagtaatc atagtaactg acaaaatatt ctacagcgtt
    22981 atttgggaaa aattctttaa actcgctata cagctgtcct gctaacgtct tattgtgggc
    23041 catgacaagt gttggcttat ttacttcctg aatcacgttg gatacggtaa aagttttccc
    23101 tgtaccggtt gcaccaagta aagtttggtg tttcaagcct ttttttaatc ccgcaactaa
    23161 ttgttctatc gctctaggtt ggtctccttg tgggctatac ttagaaacta actcaaattt
    23221 atccttcaac tcggattccc cctattcttt atcggtccga ttctggtatc tgaaaagctt
    23281 tatttgtgaa aagtccagca aagcaaaaag cggatttttc agatccgtta atgtttctat
    23341 tttatcataa atattttaat tagcctagca aaaaccgaac atattttcgc atttgttgaa
    23401 aaataaaaaa cgcaacctgt ggattacgct tttctttatt ttatcacttt tacgcttttc
    23461 tacctatata tttgctttgt taaaaatcac tgccactctt ctttaaacgt cgcagcatat
    23521 atgttgcaag cacaaaacca atggtcatcg aaaaagcatc aataataata agccacatag
    23581 aatttgtata acctaacttg gcagaagcga cgatcaaaat taccatcaaa agcaaagcga
    23641 cataacgatt ataggtgatt ctcgcaaaaa gaataacaag gagacaaggg aaaataagcg
    23701 cagatataat ttgatccatc ttactttcct cccccttttt tacgcgtctc gcaatgcttt
    23761 ggtcgttatt tccgttgtaa gctgtggtaa ttctgttttt tcgatacctt tttcagcaag
    23821 catatctggt aaaatttctt ttaaaaaata cttcacgcta gccatttctc ggtactgata
    23881 aatggttgca agtgcttcac tataaatctc cacaaaaata ttttctggat ttcctttttg
    23941 aatttcacca aaggattcat ataacaggtc tactttatca gaaattgcga ggattttccc
    24001 ttccaacgta ctgtctttac cttcttttag caaatgacga taaattggtt gatacgtttc
    24061 tgggatttct cgttcaataa aattttttgt catgctttct tctacttctg aaagcatttc
    24121 gcggagttct gtcgttgcat atttcacagg cgttttaata tccccgatga aaagctctga
    24181 ataatcgtgg tttagcgctt tttcgtatag tgcacgccaa ttcacttcat tcccagcttc
    24241 ttcctctaca gcgccgaaaa attgagcaat ggatgtaact ttatatgaat gttctgcaac
    24301 agagtgctct tgatatttaa attttcctgg gcaacgataa atgttttcta aatctgataa
    24361 actttggaaa tattgatgaa ttcccatatt atccctccat ccttcgtttt attcttcacg
    24421 tttttgtttt ttattggccg gattagtgtt ttcgatttca cgcatcatca gcgccgcagc
    24481 ataaccaatt aaagcaatca ttgcggctga gtaagttcta aaattatcgg tagcaaaaat
    24541 aaaaataatt gctgaaaata aaagtgtcgt cagtattccc cagctaaaca actttgttcc
    24601 gcgcgccgtt ccgactttca tatgcgaata aataccaaca taacaaacga actgaatgat
    24661 aataaattgc acaacagata aaccaataac tgctgtgaga ttactattcc aaacaactgc
    24721 taaaatcgca ataataatca tcacaataat ccctataata acaatgaact tctgcattgg
    24781 tgataatttc ttcaaaatac ttcctccaag cttttatttg ttacttactt taccataatc
    24841 tctgtttatt tgggataaaa aacacccatc attcctaaaa ggttttctga gcgttcttac
    24901 ttaatgatgg tgcacgtggc gaattgcttg tgtgagtaat tctaatacgt gattatcatc
    24961 ttgcatataa taaatcgtcg tgccttcacg tcttgatttc acaagtctta agttttttaa
    25021 aaaacgcagc tggtgagaaa cagttgtctg gttaaacgca agtgttcgcg caatttcatt
    25081 cacagagtat tcgcggtctt gaagcaaatt taaaatctgc acacgcgttg gatcagaaag
    25141 cgccttaaat atctgcgtaa cactaaatag cgtttcttca tctaaagatt gttttgcgtt
    25201 ttccattaaa tatcactcca ttttccatat atgttcatat actcatatga tacttaaata
    25261 ggaatgattc cgcaagttta acaacacatc tattaaaaaa tgattaaata tgagcaaaaa
    25321 caagattttc tctgtttcaa tgatacaatt tttttatcat taagaaagga gagctgggga
    25381 ataaaagggt tttaaatatt gagaagttat ttaaaccgcc taacacacca aaaaaagccc
    25441 gattaacctg tggaaaggaa aatcgggctt tttttatctg tttaaatctt caatttcgcc
    25501 actcttcaag taaacaatcc attcgcacac atttgttaca taatcaccaa tacgttcgat
    25561 atactgggaa actaagagta gttgtgaaac atcttctata tgctctggct cttcttgcat
    25621 aaaatgaata catttttgat aaacgatttt atgaagctta tcgacttcat tatcgcgctc
    25681 agcaattttg cgagcagcaa cttcatcttc tgcaaggtaa gcttttaata cgtcttgtag
    25741 cattgctttt acaatttcgc ccatttctgg tatttcggga atcggcttta aaaccttact
    25801 ttcaccaatt aaaatagccg ttttggcaat acttactgcg tggtcaccaa tccgttctaa
    25861 atccgaactt gtttttagta ctgtgacgat ttttcgcaaa tccataccaa ctggctgttg
    25921 caaagcgatc aactcaaaag agcgttgttc cagtgaaagc tccatgttat tgattgcttt
    25981 atcttctgca actacttgtt tagcaagctc ggtatcgcgg tgtacaagtg acttgactgc
    26041 tttaaaaatc gcttcattcg caagcattcc catttccatt agatgttggt gcaagtcgtt
    26101 taactgttcc gtaaaaattt ttctgactac cataataaca ctcctttatc caaatcttcc
    26161 tgaaatatag tcttctgttt ccttttctgc tgggttggta aaaatactcg tcgtatccgc
    26221 gaactccacg atgcgaccat ttaagaaaaa ggcagtttca tcggaaatcc gggatgcttg
    26281 ttgcatatta tgcgtcacaa taacaatcgt atagtctttc tttaattcta aaatcaaatc
    26341 ttctactttt gctgtcgaaa ttgggtccag tgcagaagtt ggctcatcca tcaaaataac
    26401 atccggttta acagctagaa ctcgtgcgat gcaaagccgc tgttgttgtc cacctgacat
    26461 cccaatcgcc gaacgatcca gcctatcatg cacttcttcc caaagagccg cttgacgcaa
    26521 acttctttct acaatctcat caagtacttt tttgtctttt ataccatgca tccgcggacc
    26581 ataagcgaca ttatcataaa tcgaaaacgg gaatgggttt gcttgttgga aaaccatacc
    26641 cacttttttt cgtaagttaa ccatgtcaat tttaggatct tgtacatttt caccgccaat
    26701 atggatttct ccagtcgttt tcacattggg aattaaatca ttcattcggt taagcgtacg
    26761 cagaaaagtt gatttcccac accccgacgg accaattaga gcggtcactt gatttttctt
    26821 aatgtttaaa gcgatttttt gtagtgcttg tttggaacca taaaataaat ctacatcttt
    26881 tgtttcaatg atatactcta ctttttcagc agtttcagtt gtcataaaaa agctcctttc
    26941 tagccaaagt taccagaaat atagtcttca gtttgttttt gttgcggatt cgtgaaaagt
    27001 tcggatgttc ctgagaattc cacgacttcc cccagataga agaaagaagt gtagtcggat
    27061 acacgagccg cttgttgcat attatgcgtc acgattataa tagtatattt atttttcaac
    27121 tcattaatta aatcttcaat tttgcttgtc gaaattggat caagtgcaga tgctggctca
    27181 tcaagtaaca atacttttgg ctgcattgcg acagctctag caatacaaag acgttgttgc
    27241 tgcccaccag aaagggatag tgcgcttttt cctaaatcgt cttttacttc gtcccaaaga
    27301 gctgctcggc gcaaactttt ctccacacgc tccataattt cttttttatt cttcatgcca
    27361 tgacgtttga ggccaaaagc aacattttca tagatagatt tcgtgaatgg atttggtttt
    27421 tggaatacca tgcctatttc tttgcgaaca ttgtataaat caacttcttt acgattaata
    27481 ttaatcccat cgtataaaat ttgaccttcc atgcggcaac catcaatttc atcgttcatt
    27541 cggtttaatg ctcttaaata tgtggattta ccgcaaccag atggtccaat caaagctgtc
    27601 actttatttt ccgggaaggt taaatcaaca cctttaattg cgtgattatc gccataatat
    27661 acgtgcaaat cctcggtcgc cattgcagca ggaagtgaat gaggatctgg tgttgcttgt
    27721 aaaattgtat taatttcagg tttcttcgtt aacatcattt aaaatctcct tttcctggct
    27781 ttttaagacg aggtcatgcg tttataaaca aattttccaa gcaggcgagc taagacgttg
    27841 aaaagtaata cggaaagaat taataccgca gaagctccgt cagaaacggc ttgtgcatct
    27901 ggcataatcc cctcaccatt aattttccaa atatgaacag ctaacgtttc tgctgggcgg
    27961 aaaatattta gtggtgaagc tggattgacc ggattccagt cagtgaaatc aagaataggt
    28021 gtactttgac cggctgtgaa aataagcgcc gctgcttcac caaatacccg tcctgctgct
    28081 aagataactc cggtaataat tgccgggagt gcggctggaa caagtactcg cgtgattgtt
    28141 tcccatctgg ataaaccgag agcaagccct gcctcacgct gcgtgtttgg aatagcatta
    28201 agtgcctctt cgacaacacg aattaatagt ggtaaattga aaatcgttag tgtaagcgcc
    28261 ccggaaataa ccgagaagct ccaccccatt tgaataacaa aaacaaggaa accgaatagc
    28321 cctacgacaa tagatggaag tgaggaaagc acttcaatcg ttgtacgaat taaatctgta
    28381 atccaatttt tacgcgcata ttctgccata taaattcccg caccgagcga gataggaaca
    28441 gaaataatca tcgtaataac gagcatataa aatgaattcc agatttcagg accgattccg
    28501 ccgccagctt ggaacgactg tggtggggtc gtcaaaaact tccagctaag ttgcggaaca
    28561 ccttttacta aaatatagcc aagtaagcca gctaaaataa tgacaattaa tacagcaata
    28621 gcatagaaaa cgcctgtcgc gattttatct tttgttttta cattcatttg actttcctcc
    28681 tacgtccgat gaagcggatc acaatgatga aaaatagtga cattgcgagt aacaccattg
    28741 caagtgacca aaggatatta ttatcaagcg tccccataac tgtatttccc atacccattg
    28801 ttaaaatact agttaatgta gaagctggct caaataatga ggttggaata acagcagagt
    28861 tcccaataac catttgtaca gcaagagctt caccgaatgc acgagccatc ccgaatacaa
    28921 tcgctgtcaa aattcctgaa cgcgagctac gaagcactac tttccaaatc gtctggaaac
    28981 gtgttgcgcc aagtgccaac gaagcttctc ggtagtgacg tggaacagat ttaatcgcat
    29041 ctacgctgag tgaagtaaca gtcggcaaaa tcattactgt taaaactacg gtcgcagcgg
    29101 caataccaaa gccacttccc gaaatatggt cacgaataaa tggaacgaca acacttagtc
    29161 caatgaatcc ataaacaaca gatggaatac caactaaaag ttccataact ggttgcaaaa
    29221 tctttttccc aaacttaggt gagatttcca ccataaaaat ggctgcaccg attgcaagtg
    29281 gtcctgcaat acaagcggca aaaagcgtta ctgcaaaaga accaataatc attggcaaag
    29341 cgccaactag aggatttccg tttgcatctt tttgcgaagg attccagtct gttccagtta
    29401 taaaatcaac aaaagacact ttattaactg taaatgttgc taaacctttc gatataacaa
    29461 aaaacaaaat agacgctgcg gcaataacca tgattgaaat acagatgaat gtaataattt
    29521 tgcctctagt ttctagatgc gcctttttag aagtttgtgt aagcttcttt tcttttatcg
    29581 cttccaagtc acgtaagctc ctttctcctc ccatgtttac tcctaacatg ggtatacgtc
    29641 tatcccggta ttactaggat agacgcccat ttcattcttt ttattttacg tcagttagtt
    29701 taccagatgc atcacgttcc actttcatgg atttgattga ttggtaacca agttgtggta
    29761 cgatattatt ttgtacttca tcagaagtca tgtattttaa gaacgttttt gttaagcctt
    29821 ttggttcgcc atttgtatac atatgttcat aagaccagat tttccagtcg ttagttgcaa
    29881 ctttatcttc agttggttca acgccatcta atgaaagtcc aactacggaa gcgtcaatgt
    29941 aagagaatgc taggtagctg attgctcctg gagtttcgct tacgatttta cgaactgtac
    30001 cggatgaatc ttgttcttgt gctttaactg gtgttttacc atcaagtccc catttttcga
    30061 aagtagcacg tgttccgctt ccttccgcac ggttgatgat tgtaattttt tcgtctttac
    30121 cgccaacgtc tttccagtta gtagttttac cagtgaagat atcgattaat tgttgttttg
    30181 taatgttttt aacgcctaca tctttgttta ctactggagc cattccgaca actgctacac
    30241 gatggtcaac cagtttcgaa gcatctacgc catctttttc ttcagcgaat acgtccgagt
    30301 taccaatttc aactgcgcct tgttgtactt gtgttaaacc agttccagaa ccaccgcctt
    30361 gcacgttgat ttgtgcttta gggttagtgt taataaattc tttggaagct gcttcaacga
    30421 gtggttgaag tgcagtggat ccgactgctg ttaatgagcc agaaacttct ttatcccctt
    30481 ttgttgatcc gtttgcttta tctgatgaac tgctgtcact tccacatgct gcgaagacaa
    30541 gcattactgc tgctaacatt gctactattc ccaaatactt ctttttcatt atcttattcc
    30601 caccttgttt ttttaattgt tattccttac aagtattact ataacgtctg agatttaagg
    30661 tggtgtgtag ctaatgttaa gtaattgtaa ataaccacat tttttgtcga aaatgtaaac
    30721 ttttttatga atatctttca aacagaaggc aaactagtaa attattacac caaatttgtt
    30781 tctttcgtaa ataaaataaa aatatcctgt ctgaaagatt acattctttc aaacaggata
    30841 tttgttaggc tttttttggt aaagtgacgc ggaaggtcga gccaacttct tcttggcttt
    30901 ctacttcgat tcgcccacca cagttttcaa ctaaatgctt gacgatggaa agtccaagtc
    30961 cagtgcctcc tgagtgtctg ctgcgggctt tatccactcg gtagaatcgt tcaaacacgc
    31021 ggtcaatatc tttagccggg atgccaattc cgttatcagt tacttctatt ataacttctg
    31081 cctcttgctc gattaattta acttctactt ttccatcgac tggggtgtag ttgattgcat
    31141 tagaaagcaa gttaattact atctgttgca gcttgtcacg atctgtttca atcataacgg
    31201 atgcacttgt tttttctgga atggttactc gaatattttt ttcagttgcc atttcaaaaa
    31261 tagtgcgagc agattgttca attacctcgt caacgtcaac cagctcaacg ttttccgcga
    31321 ccggattttg ttcaattcta gaaagtgcga gaatatccat aatcaaacgg tgcaatcgat
    31381 cactttcttc tttaataatc gttaggaatt tttttagtag cacttcgtcg tacattgcgc
    31441 cgtcaagtaa tgtttccgcg aatcctttga gagccgtcac gggtgttttt aattcatgag
    31501 aaacgttggt gacaaattca gaacgaacat tttccaaatg gcgaatttga gtgatatcat
    31561 gaagtaataa aataatccca gtaatttccc cattctcccc taaaattggt gaaacacttg
    31621 catccaaaat catttcgcgc gggaaataaa gaataatttc tttttgttga atggtttttg
    31681 tttcaaaagt cgcttctatc aactggctca gtgcaaaact tttaattact tcataaaatg
    31741 gtttgccggt gatttctgtc tctcctaaaa tttgatacat ggtgcggttg gtcatgatga
    31801 cttgtttatc gacattaatc agcattacgc cacttactaa gttttggaca atagcattaa
    31861 gtcgttgctc attttgctta atttcaaaca tttgcgtttc caagctttct gctaatgtgt
    31921 ttacactaat ggagagatct tgaagttctc cgcttatttt accgtggatg cgactatcgt
    31981 atttatgatt ggccaaatct gtagagactt cgatgatttc gcgaactggt ctagtgattt
    32041 ttctagcaat aaaaacactg attgctgcga taattacaag tgcaataccg aaaataagcg
    32101 ctaagttccc ccagagttta gcaaccgccg catcaacaga ttcaagtgaa atcgaaattc
    32161 tcagtacacc atctgttttg ccttgatgtt taacaggaac cgcgacataa agcatactat
    32221 aaccaagtga atcactttca cggattgaaa taccaacgct ttcccctttt ttcagaatat
    32281 ctgttacttc ggggcgattc atatggttat caagtttttc tgggtctttt tttgtatcag
    32341 ctaccacgtc gcctttgcta tcgatcaccg taatgcgtgc atcaatatcc tcgccaagtg
    32401 gatcaagact tttttggata gttgcggcat ctttatctaa atctaaattc tccatattag
    32461 ttgtttgaag cagaattttt gcgtcatctt ctaattgatt ttctttcata tttaagtacg
    32521 ttgatttcat tagttccccg gaaaaaacgc caacaataac catcacaacg aaaaataaga
    32581 taaaaaagga taacccgatt ttcagccata atttcttcat tatttcacgt tctccatttt
    32641 ataaccgaag ccacgaattg ttttgatgta tttaggttgt tttgtatcta gttcgatttt
    32701 atcgcgcaaa tggctgacat gaacgtctac aattcgggtt tctccaacgt aatcatagtt
    32761 ccagacagta tcgagcaatt ggtctctaga gaaaactttg ccacgatgat ttgccaagaa
    32821 tagcaataac tcaaattctt ttggcgttaa atcaagtaaa tcatcttgta aatacacttc
    32881 ataactatct ggcaaaattt tcaaatcacc aattaatatc gtagcttccg aatcttcggt
    32941 tatttcttct attatttcgg cttttccttc tgttcgacgc aagattgctt taattcttgc
    33001 aactacttct cttgggctaa acggtttagt catatagtca tctgctccaa gttccagtcc
    33061 gataatttta tctaattctt catcttttgc cgttaacatt aaaattggca catttacttt
    33121 atcttggcga agtttttttg ttacttcgat tccgtccatc tcaggaagca ttaaatcaag
    33181 cacaattaaa tctggttttt cggacaaagc gagttcgtat ccggttctgc cgtcttctgc
    33241 tgttaccaca tcaaacccag ctttttcaat gttaaattgc agtaacgtaa caatagaagc
    33301 ttcatcatca actacaagaa tttttaccaa cgtacttccc atcccttctt tatgtaacac
    33361 ttttatctaa aatatagcat gaattaacct ttttcgggta gaaatgcctt tatattaatc
    33421 ttatctttac aaaaacttaa aacaccaatg ctgctttcaa acaacactgg tgtcctaaaa
    33481 ttatcttggc tctactaata acaaaccaag ttcaaatgat tcattctcat aaagtgctgt
    33541 ttgttcaaaa cgtggttcac cagcgttatc aattactttc agcttacaaa atgctcggtt
    33601 taagtttagc gcttcgtaaa gttcctcgcg agtatgcact ggtcgactgt ttacttctgt
    33661 aattttttca ccagctttca agtttagtcg cgcagacgga gtggccgcac gagcacccag
    33721 aactacaagc ccatctggct gaggaccaaa tttctttggt gctaattttt cggaacgata
    33781 gtggcgataa gaaatccaaa atcgaccaat tacagcgaac atgaaagcga acaatgtcag
    33841 tactggcatc acaattccta ataaaccagc tacagcaata attgttgcta atgttgttac
    33901 ctcaacagca attttacggc ttgcttcttc tggaagttgt gtctgtactt gttgttggaa
    33961 gccgatgaat aacggtaaaa tgattaatga atacgactgc gaaccaatag caaagactgg
    34021 ccaccactca aaaattttcg taaacacatc tcctggtaaa aacataacaa tcggtacaaa
    34081 ccataatttt cttaattgaa aggaaccgat taatttaccg cgcttacttt tccgaagaga
    34141 tggagaggga ttttttgcgc ttgtatactg gattaagaaa gcttctacaa ataacaatac
    34201 tgcgagcaga aatgtcatgg aaatcataaa gttatcaata aaaatcgagt catacgtgaa
    34261 tgcctcattc gtaaacggtg ctaaactcac atcaaaataa tagcagaaat aaaaaatcaa
    34321 actcgtaata ccgatagtaa atgccgttga actcaaacgg aacatcccta caattagcaa
    34381 gaaacaagct actacattaa aaatagcaac ccactctatc atcacaccaa atccaatgag
    34441 cgaggtaaca acagaaatag ctaatccaaa taacaaactc acaccaaaga aacttttcaa
    34501 ttctaaccaa ggtgaataaa tactgatact aaatgatttc cgttcccacc tcacacggtt
    34561 aaaaccagcc agtatcgcta aaagaattcc tacatacaat gctggttgta gaagtagtct
    34621 ccctattcca tttagtattt caacaaaaac atccattttc tacaccagct ttccctaata
    34681 cttctataat ataggcgata aaagtcggct taccgcttct ttaaatttaa tccataaaga
    34741 tcgttttgca tataattcag gtgttagttg atacgatttt agaatatctt ccaaaaaggc
    34801 atcttctagt ttttgcacca tttgtttttc ataaataaaa gcatttactt caaaattaag
    34861 tcggaaactc cggaaatcca tattcgcggt tccaactgaa gcaatttcgc catctacaac
    34921 gagtgttttc gcgtggataa aaccattatc ataaataaag attttcgctc ccgtttccat
    34981 taattcaccg gcgtagttag tagttgcgcg gtaaacaaaa gcatggtcag gcttattagg
    35041 aatcataacc ctgacatcta ccccagaaag tgctgcgatt ttgattgctt caagcaaact
    35101 tgcatctgga ataaaataag gtgattgtaa ataaattgtt tttttagcag cattgatcat
    35161 tttgatgtaa ccatttttga tttgttgcca ttcggaatca ggaccactcg aaacaatttg
    35221 catacttgta tgacctttcc catgaaaagt cgggaagtat cgcgctttgt aatcaatttt
    35281 atgtgtggat gatgcagaat tccagtccat aataaagcga gtttgcatcg cataaacagc
    35341 ttttccatgt acacgtaaat gtgtatcacg ccagtaacca aatttcttcg atgccccaag
    35401 atattcatca ccaatattaa aaccaccaat ataaccaaca tctccatcga ttatagccaa
    35461 tttccggtga tttcggtagt tgagacgaaa gttaatcaat ggtaatttag acggaaaaaa
    35521 aggtctaact agaccaccat ttttttgaaa cgtacggaaa aatgattttt tcgttgtcct
    35581 tgaacccatt gcatcataaa taattttcac atttaaacct tctgctgctt ttctttccag
    35641 cacgcgcatt aagcgattgc ctagttcatc agaatgaaaa atataataga tgagatgtat
    35701 atgatctttc gctttttcaa tatcagcaat tagcgcatcg aatttctcat gtccatctac
    35761 aaaaagttcc acttcattgt cttgcgttaa aatagcacca tcgtttacga gtaataaata
    35821 gattaaatca cgatgttttt tcacattcgg atcgctaaat ggaaattctt tttgccgtat
    35881 catttctatt tgattggcag tagattcctg tatcccaatt ttttcttgtc ccttccaatc
    35941 gaaaatcttt ttgcctgata attttctccc aaaaatcaaa tagataatga aaccaaatat
    36001 cggaacaaaa gttaagacta gcaaccaagc ccaagtggcg gatgtatcgc gtctttctaa
    36061 gaagaccgtc actgccgcaa agaatacatt taaaattagc aaaatcacta atagataagc
    36121 caacagtccc attgtgttcc cccttttctt acacaaactg atagtagtat catatcataa
    36181 aatctgcaat tagcctattc cagttcgttt caacacaaga aaaaaaccat tgatttttca
    36241 tcaatggttt ttgaattaaa tataaggtgc tggatcgact ggaataccgt ttttatgtat
    36301 ttcaaaatgt agatgttgtc ctgtcgattg acctgttgat cccataatac caatcggttg
    36361 gccttgggaa acttgttggc cggtaactac tttcaagcta cctgcacgca tatgtccgta
    36421 tagtgtctgg aatccattgc catggtcaat ttttactaca taaccataac caccaaatcc
    36481 actacctgat gcgccaaacc ctgaaaatac aactgttcct gatgctgcag ctgaaacagt
    36541 aactgtaccg ccacctgcaa tatcttgacc tttgtgggat tcgtatttgc cagtcacggg
    36601 atttgttcgt tcgctaaatc cagaagttaa tataccagaa gctggtttaa taaattggcc
    36661 tccaccggaa cttactgttt ctgtagctcc acttgaatct gaacttggtt gttgtttaac
    36721 aacagaggaa cttttagcgc ttgctgctgc ggcttcttgc attcgcttct cttcagcggc
    36781 tttaattgca gcctcttgtt ttgctttttc acctgcaata ttagaagcaa gtcgtttttc
    36841 ttcatcagta agcgcacctt gttcactagc taaaagggtt tgttcgctct tagttaagtc
    36901 ttttttgttt gctagagcca taactaaatc atttttttct tgtttttgac tttccatatt
    36961 gtttttcgaa acttctaatt ccactgcaag tacttttaga ttctctagtt ttttctgaga
    37021 agcagattct gctactttta gtttatcttg atcatctttt tggtcttgca taatgttttg
    37081 gtccgctttt acaattgccg atacaactgt cacgcggtca acaagttctt taaaatcatc
    37141 tgcttcaaaa atcatatcta aataagaagt ggctgttcca gttgtttgta tagcacgcgc
    37201 tcgattatca agtacttttt gacgatcgcg aatatcattg cgcagttttt ccatttcttt
    37261 ttgcaatttc tttagtttct cgttttcaga gctcacttta tcttcctgct cttttaattt
    37321 cttgttagtg gcatcaagac ttttcataag taattctaat tcttttgcag cgtctttttc
    37381 agcactttct aaatgattta attccgagtt tttcgagtct atatttttat ctagttctga
    37441 ttttttttgt tcaatttcat tttggcgctt ttgcatatca ttgatagtat ccgcgtgcgc
    37501 accagttagt ggcgcggaaa taaccaatag gctaagaatc gttactaccc catatttttt
    37561 taacatttta agctcctttt ctattctcta tttgactagg aacttcataa ttccctttac
    37621 cataccatat aaaaaagcac ctttgtttaa aacgacaaag gtgcttttta acttttcaat
    37681 aataattaga agttagctac gcggccatat cctacaagat atttagccca gtaaccgcta
    37741 gtgatgttgt catatttaac gccattgttt tgagcgttaa tcatttgacc gccaccaaca
    37801 taaattccaa cgtgagcaat tccgctacca tagttaaaga atactaagtc acctggtttt
    37861 gcttggctag cgctgatttt agatgctgct gcatattgtc caccagatgt tcttggaaga
    37921 gaaacaccag ctgcacggaa agcataagaa gtaaatcctg aacagtcaaa tgcgcttggt
    37981 ccagttgctc caaggctata aggttttcca agttgtgcgt tagctgcagc aatcattgct
    38041 gagtatccgc cactagatgg tgttgctgcg cttggtgctg aattgttatc atttgatgca
    38101 acatttttcg ttgtattaga ttttccactt gatgtagaag tagcagaact acttgattct
    38161 tgtccaacgt ttgaagatgt tgcttcacgt aaagctgtcg cacgtgctgt agcttcttta
    38221 gctgctttat cacgttcact tacaagacca gcttttgcat tttcagcact tgcttgatca
    38281 gaagctagtt gagcaacgat tgcttctttt tcagcttttt gtgcttcgat tttattttgt
    38341 tgtgcttcat attcatgaat tgctgttgct tgatcttctt gttttttctt aacagcagtt
    38401 tgttttgttt ttaaagcttt ttcatcattt tgttgatctt ctaaaataga tttatcagaa
    38461 tcaactaatt ggttaactgc agaaacacga ccaactaagt cagaaagatt ttctgcatct
    38521 aagataactt caagataagc attagaatta gaagtttttt gcatcgcacg agcacgttct
    38581 tttaaaacag tttcgcgttc tttaatacgt tcattgatac ttttaatatc ttcattaagt
    38641 ttttttagtt ctttgcctgt tttatcaaat tctccttgta gagatttagc tttttcttga
    38701 gctttctcaa ggtctgctac taaaccagaa agatctgatt gtaaatctgt ttttttagac
    38761 ttgatgtcgt taattttttt atcttggttt tgaatgtctg tattcacgtc cgcgaaaaca
    38821 ttagtcgtaa aagctggcgt caaactgata actgctgcga gtgaaatcgc aataaacgta
    38881 ttctttttca aaaagtttac ctcctaaaaa gctccctagc tttttctttt aaattatttt
    38941 tatttcgatt taagtaattt tctgagttag actttcaaga atctgcggat agatattacg
    39001 cttccccaaa tcccgattag tacgccgatt gcaataatca agccactaat ttgataagcg
    39061 aatggtgttg gaggcagaag tgatagtgag cttgtcacta acttcggatt caccaagttg
    39121 taaatattaa catagcctat aaatgttaac acaactggta caatcgagcc aattaatcct
    39181 agccaagcac cttctaaaac gaaaggccag cgtatgaacc agttggtcgc tcctactaat
    39241 ttcattattt ctatttctct tcgacgggag aaaattgcaa tcttgattgt gtttgatatt
    39301 aagaacatcg ctgttagtaa caacccaatg cttagtataa taccagcata tcgtccccat
    39361 ttcaaggtat caaacaattt atcgactgtt ttctcaccat attctacatt atctacgtac
    39421 tgtaattttt ctactttttt tgcaatagtc tttgtttgtg tgggctcttt agcctctaca
    39481 acaaacacat cgtatagtgg attatcttgt ttaaacaatt cgaagttttt gccgtacgca
    39541 ccaactaatt tcttcaattc gtcatcctta gaagaaaagc tgacactatc aactccatca
    39601 atcttctcaa tgtttttctc aagttcttgc tgctgtttct tgtctgcgct tagagaaata
    39661 tgtacgttaa tttgtacatt gttttctaca tccgttgcaa gcttgttcat gttgatcaat
    39721 attgcaaaaa acacgctgac taagataagt gttactgtta ctgcactcgc tgctgcaaag
    39781 gtcatccaac cattccggta aaggctctta aaactttctc ttatatgtct tcctacagtc
    39841 ctaaatttca tagccatatt ctccttgctg ctcatctcga acaattcttc cattctcgat
    39901 agcgactacc cggtgtttca atgtgttaac aatttctttg ttgtgggttg ccatcacgat
    39961 ggttgttccg cgattgctta tttcttcaag gatattcatg atttcccatg aagtatcagg
    40021 atctaggtta ccggtcggtt catctgctat taatacttta ggcatatttg caatggagcg
    40081 ggcaatggat atccgctgtt gctcaccacc ggaaagttca tccggcaaca ttcttacttt
    40141 atgcttaagg ttgactaaat ctagtacttc cataacacgt tctttaatta cggatggctc
    40201 tgtttcaacc acttccatcg cataagcaat gttttcataa actgttttgc tttgaagtaa
    40261 tttgtaatct tggaatacca cgcctacgtt acgacgaaga tatgggattt cacgattttt
    40321 catattaatc aaatcaaatt tgtctacgat gattttgcct tttgtcgctc gttcttctct
    40381 gtaaatcatt ttgatgaagg tagatttacc agcaccactc gggcctacta cataaacaaa
    40441 ttccccttcg ccaatgttaa tgttgagtcc attggcagct gttatgccgt tagggtattt
    40501 cttataaaca tcttccatta atatcatttt atcaccttac tatgcctttc tactgagtta
    40561 cattttaggt aatgcatggt aaccatgaag atgagttgtt tgtaggtacg aatttaaact
    40621 cacaacataa gcttaattat accatgacag tttttcatct ataggttaat tgcattacaa
    40681 ttatatttca gggtgtgaca atatctcgat tattgtaata ggaaatacga ttattacgtt
    40741 gatttccaat ttatatatat gtctgcggtc tagtgttatt aagacaaaat aaaaaagaac
    40801 ccacattggt cttttctact gctaacattg taacttgttt ttaccctaaa taacattaca
    40861 ggtacattaa aaatcattac agttctagct agcggaatag accaatctag ttaaaatagc
    40921 tcgagatctg caactaggct aaactcgcct gtcatcaaat tgtcaaaaag cgggcctgaa
    40981 aacttaaaaa aagtaccatt tcctgactaa aaaagttagg aaatggtact tttttatgaa
    41041 gtaaaacctt cacccattac ttcacttgcg ctcattacaa ccacaaaagc ctctgggtct
    41101 atttctttta taacttcttt taaccttgaa aattcacttt gcgcaatcac acataataaa
    41161 atttgcttgt catcctctgt atatccacct tttgcggaga gccgagtaat gcctcggtca
    41221 attttaaaca gaattgcttg gcggattgct tcttgatttt cagaaataat aaagactgtt
    41281 ttggattgat ttaaaccaac ttgtaccaaa tcaattgttt tacttgtagc gaataatccg
    41341 acaagtgcgt acagccctga ttcaatgtca aaaacaaaca ttgccgaaat aacaacgaat
    41401 ccatcaatca aagccacaca aattcccaat gttagatgag aatacttatg caaaatttgt
    41461 gcagcgacat ccgtgccacc agtagatgct ttgcctcgaa aaacgattcc aagtcccatt
    41521 cctacaagta cgccgccaaa caaagcagct acaagaggtt catgcgtcca tggctccaag
    41581 ccttgcgtta aatacacaaa gaacggtaaa agcatcgtgc cgacaaaagt tttcaacccg
    41641 aattgatagc ctaaaaagaa taatcccgct agaaataaag gaatattaaa tgcccactga
    41701 ataaaagcag gattccaacc tgttaaatag ttaatgatcg tacttatccc gctcactccg
    41761 ccagaagcaa cgtgattcgg gagtagtaaa acattaaaag caagtgcgat gagagctgca
    41821 cctataatga cataaatata ctcaattaat ttagaaacaa ctggggataa cggttgtttc
    41881 tttcttttat ttgccatctc ttttatccaa tcctagaacg caaatatgca ttgataaatt
    41941 catctaagtc tccatccatt accgcttgaa tattaccggt ttcgtaattt gtgcgatgat
    42001 ctttcaccat ggagtaaggg tggaaaacat aggaacgaat ttggcttccc caaccaattt
    42061 ctttttgttc tcctcgaatt tctgctagct cgcgttcttt ttcctcttgt tctttttggt
    42121 ataattttgt ttttaacatt ttcattgcct gttcacggtt tttaagctga gaacgctcag
    42181 attggcacgt tacaacgatg ccggatggaa tatgtgtcat cctaacagct gagtcagttg
    42241 tattgatatg ttgtccacct gcaccagttg cgcggtacgt atcaattttc aagtcttctg
    42301 tacgtacttc aatttcaata tcatcatcta attcaggcat tacatccacg gaaacgaatg
    42361 atgtatgacg tctgccggat gagtcaaatg gcgaaatacg cactagacga tgcacccctt
    42421 tttccgcttt taaatagccg taagcattgt ggccttttat aagtaacgtg acacttttta
    42481 ttccagcttc gtcccctgct tggtaatcaa gcatctctac tttaaagcct ttcttctcag
    42541 accaacgttg atacatacga agtaacatcg aaccccagtc ttgtgattct gtaccaccag
    42601 cacctggatg aagttctaaa atagcattat ttttgtcata tggatcactt agcatcagtt
    42661 ttaattcaaa ctcactaata gtcgccatgt aagctttaat atctttttct aattcttctt
    42721 gtaaatcttc atctgcttct tcttttaata attctagact aatttccata ctttcttgtt
    42781 cttcttctag cgcatgaaaa gcttggtatg tttctttata tccgtttgac tcattaatta
    42841 ctttctgtgc cgcttgttgg tcattccaaa aattcggatc taacatttgg tcttctagct
    42901 cagcgattcg aacttccata ctgtctaagt caaagagacc ccctaaagtc tttgatttgc
    42961 tgcgctgttt tttctaattc attacgaatt tctgctaatt ccattctaat tccacctttt
    43021 ttaaatttac ttataaactt tcatagcaaa aagcgccgtc tttcaggcgc tttttaaatt
    43081 gtttcaatct atgcttcttt accgtgacaa tttttatatt ttttgccgct accacatggg
    43141 catggatcat tacgtccaat gtgttgatct ttgcggattg gttggcgttt cgcttctggt
    43201 ttaccttcag caggattaat tgcttcccct ttggcaactt gctcacgttc aaggttttgg
    43261 cgaatttctg ctttcataat ataacgagca acatcttcat cgatggacga taccattgct
    43321 tcaaacattt caaagccttc tgattgatac tcacgaagcg gatcaatttg accgtatgca
    43381 cgtaaatgaa taccgtcacg taaatgatcc atggcatcaa tatgatcaac ccatttagta
    43441 tcaacaacac gaagcaatac tactttttcg aattcgttaa attcttctgg aggtagtagt
    43501 gtttcttttt cgtcgtaagc cgctttgatt ttatctaaaa ttaaattttg aatatcttcg
    43561 cttgttctat tttgtagatc ttctagtgtg atagtgcctt caggaagtaa gttcgcatcc
    43621 acatagtcga taattccttg tagattccaa gcttcttcag gttcatggct tgatgcatta
    43681 ctagaaacga taaagttgac cgttcgttga atcatttgtt caataatttc acgcaaactg
    43741 ttttctgcat taattacttc ataacgctgt ttatagataa cttcccgttg ttggcgaagt
    43801 acatcatcat attgtaaaac ttgtttccgg gaatcaaagt tatttccttc cacacgtctt
    43861 tgtgcggatt caactgcacg actaaccatt ttactttgga tagcatcttc tgccatacca
    43921 aagcgttcca tcattgattt catattgtct gaaccgaaac gacgcatcaa ttcatcttcc
    43981 atagaaagat aaaattgagt cacaccaggg tctccttgac gtccagaacg accacgtaat
    44041 tggttatcta tacgacgtga ttcatgacgt tctgtaccaa taactgctaa acctccagct
    44101 tcaatcgtac cctcaccaag tttgatatcc gtaccacgac cagccatgtt ggttgcgatt
    44161 actaccgcgc cacgttcacc tgcatgttta atgatatcag cttcacgttc atgttgcttc
    44221 gcgtttagta catcatgctt aattcctttg cgttttaatt tgctagaaat aagttcggat
    44281 gtttcaatcg caactgtacc gactaatacg ggttgtcctt ttgcatgacg ttcggcgata
    44341 tcttctacca ctgcattaaa tttcgcttca atcgttgtgt aaattaaatc aggacggtca
    44401 tcacgaataa ttactttatt agttgggatt tcaataacgc gcatattata aatatcgcgg
    44461 aactcttctt cttccgtttt tgcagtaccc gtcatccctg caagtttttt atacatacgg
    44521 aaatagtttt ggaatgtaat tgtcgccatt gttttggatt cgttttgaat agttacgcct
    44581 tcttttgctt caagcgcttg gtgtaaacct tcactgaaac gacgaccttt cataatacga
    44641 ccagtgaatt ggtcaacgat taatacttca tcatcttgaa caacataatc gacatctagg
    44701 ctcattgtat agttagcttt taacgcttga gcaatatgat gtaaaattac ggtattttcc
    44761 aaatcaaaaa ggttctctac atcaaagtag ttttctcctt ttgtcatacc atcttcggtt
    44821 aattgaacag attttgtttt aatatcaact gtataatctt cctcttctgt aagagtacgg
    44881 acaaaagtat ttgcacgcac atatagaata gtcgattttt ctgcttcacc agaaataatt
    44941 aatggtgttc tcgcttcatc gaccaaaatg gaatcgactt catcgataac agcaaaagct
    45001 agcggacgtt gtaccatttc ttctttgtaa acaaccatat tatcacgtaa atagtcaaat
    45061 cctaattcat tatttgtgct atacgtaata tcacatgcat aagcttctcg tttttctgtg
    45121 ctcgataaag catttaggtt tagccctaca gaaagtccaa ggaaattgta taaaacgccc
    45181 atttcttcag catcacgatg agctaagtat tcgttgactg taacaacatg cacaccttca
    45241 ccagaaagcg cgtttaaata aactggtagt gtcgctgtta acgttttacc ttcaccagtt
    45301 ttcatctctg caatgttacc ttcgtggaga acaatcccac ccattaattg aactttaaat
    45361 ggatacaatc ctagcgcacg cttcgcacct tctctggcaa cagcaaatgc ttctaccaat
    45421 aagtcatcca gtgtttcacc tttttgaaca cgctctttaa actctactgt tttttcacgt
    45481 agagcatcat ccgaaagagc agcagtttca tccgctaaag caataatctc atctgctttt
    45541 ctctccaaat atttaacatc tttttttcct gattcaaaaa tctttttcaa tagtccagcc
    45601 atttaaattc tcctctactg ttttcgctgt catcgcgcag tttcatctat aataactttc
    45661 aggaattatc ttcacttaaa tatacaaact aattctatca cttattaact aaaatataca
    45721 actggttatc tctttttaat caataaaatt atcaaaatgc cataaattct tcatctaaga
    45781 gtaaaaaaat ggagaccaag attggccccc atctgttaat tattatttta aattaatttg
    45841 tttcaatcaa accatatttg ccgtctttac gagaataaac aatattggta ccgtttgttt
    45901 ccgcatcagt gtaaacatag aaactatgac ccagcaaatt catttgtaaa acagcttctt
    45961 cactatccat cggttttaat gaaaattgtt ttgttcttac aatttcaaga tcaaaatctc
    46021 cttcattttc ttctggtggg gtgctgccgt taacatcaga ataagcaaaa taatctcttt
    46081 ctgccccttt gtcacggaac ttgcggttta cttttgtttt atgtttgcga atttgtcttt
    46141 ctaatttatc tacaattaag tcgatgctag catataaatc tccacttgtt tcttctgcac
    46201 gtagcacaag atttgggagc ggaatggtca cttcaacttt cgcattttta tcggaatata
    46261 cttttaaatt aacatgaacg ttagcgtctg gagtctccgt aaaatatcgt tctaatttat
    46321 cgattttctt ttcaacataa tctcggatcg gttctgttac ttcaatattt tctccacgaa
    46381 tgttgtactt aagcatagca attcctcctt tgaaataaaa caaaataacg ataaagaaga
    46441 gtattcttct tacccttagt ctacgtgaaa acgatgtgtt ttgcaaacat ttgcacaaag
    46501 agctaagaag cttacattca cttatcttta tttagtattt tattccacta ataccgcttc
    46561 cgcaaacctc ttttagaaga taaatatcat ctatctgaat atcgttagcg cactcacctt
    46621 gtacactccg gcttctttta agatttgcgc tgctaggtta agtgtgcttc ctgtggtgta
    46681 aatatcatca aataatatta cttctgttga ctcataaatt tcttttccag aaaagtaaaa
    46741 tgtttgttca gatgctaatc gttccctctt tgttttttta gattgctttt ctgtatgctt
    46801 tttggctaaa agctcttcat ataggatgcc agattgtttt aatatcgcgg ttgtttgatt
    46861 aaatccacgt tctactttcc gcatctcgct tactggaatt ggtacaatct tctctttctt
    46921 ttctgataga aagttcctta attccttttt gaaaatagcc cctatttcat aatccccttg
    46981 aaatttaaac ttcttcatat agtctttggc gaaatcattg taacgataaa tggatttatt
    47041 actatctaaa aaatgtgttc tacttcggca atcctcgcag acatcatcta aggattcttt
    47101 actacaattt ttacatagta agccagttag tttttcaaat cccgctaagc atgcatcaca
    47161 acaaattggc aaaggttcaa ataaccaact tatttcccaa ctggcgcttt gcctaactgg
    47221 ctgaaaacaa agtaagcaat tagtcatcta gcatcccttc tatcactcct tgttgattca
    47281 ttttttgaat gtgggagata gcttgcttca tttctattgt tttaccgtaa tgaaaaaagc
    47341 aaacgtctcc agtcggatga gataatttcc tacctgccct tcctgaaatt tgaactaaag
    47401 cagcttccgt aaaaatacga gcttcacttc caaacaccgc tacttgcaca tctgtaaaag
    47461 taacacctct ctctaaaatt gtagttgtta ataacagctt gattttccct tttcgtagcc
    47521 attccacttt ctctttacgc aattcatcgg ctgaatgaac tgtcactggg ctggcatagc
    47581 ctttattttc aagtgcattt gcaaatttat tcatagcatc aatttctgga aagaaaatta
    47641 aagccggctg atctttcttc ttcacatcat tcatccactg gataagctta ggagttattt
    47701 tccctttagc tagattcttt ttccacgggc caatccagca cgttctcggc acaggcagtt
    47761 tctttcggtg atatcgtccg ggaattttca caaaattacg ttttcctctt acacactctt
    47821 cttgccactt tttctctggg gttgctgtga ttattattgt tgaaccttct tttgttctgg
    47881 ctttcataac ggcatattct aaaaaaggat ctttcgcata aggaaatgca tctacttcat
    47941 caataaaaat aacttgaaac gcttcataaa agcgaataag ctgatgggtc gtcgctatca
    48001 cgaactgctc tccttggtag ttatcttttg agtctccata tagacaaaca atatctatgc
    48061 tagggaaagc ttcttttaaa cgtggaagaa gctctaaaca aacatccact ctcggagaag
    48121 caacacaaat tctaaaacct tgtcgcaaag cccagtccat tccttcaaac atcatctccg
    48181 tttttccaga tccggcaact gcccatagca acatatccgt ttttgctttt aaattaacga
    48241 ctatcgcgtt ggatgctttt cgctgtcccg ctgacaaagc tccttcccac ctcaataata
    48301 cttcctttgt ctctagtaat aacctagcat gttgatagta taatttttgg caactattta
    48361 ctcgtcccat cacaatgcaa tttctgcaat aaatacaatc ctctctctta cataatgcac
    48421 aggacatttt gccaaataac tgcacatccg tatttccaca tcgaaagcat ttgtttgatt
    48481 ctattgctac tacttctctt aagccctctt tactctctat ttcacgttct tgataaagcc
    48541 ttcccgggaa gatgtccatc tgtattcacc tccccttagt tatacacttt ttcttttttt
    48601 attgcagaaa cgaaatcctt gttttcgacc gcatacttat aaacaaaaca agtatttctt
    48661 ttagacgaaa acgagtattt ttgccatcca aaactactga aaaaacaaat ttagtctcca
    48721 tgaaaaaaat ctccagcttt tagctggaga ttttttattt tattgaccaa gttaagccaa
    48781 gcgcaccttc acccaagtga gttccaatga ctggaccaaa ataacttaat tcaaatgtta
    48841 cttctgggaa tttcgcttct agttgtgcaa gccatgcttc acccttcgct agatcattgc
    48901 catgaatgac ataagctttt tctgccgttt tgttttgaac ggctttttga agaatatctt
    48961 caattcgttt caatgccttt ttttgcgttc taaccttttc aaagaggaca atttgtttat
    49021 cattaaaatg aagaatcggt ttaatttgaa gcaagctacc aacaagggct tgtgctccat
    49081 tcaaacggcc gccacgctgt aaattattta aatcatctac cataaaataa gcatcttgtg
    49141 cctgttttat tttatctagt ttttggataa tctggtccag cggctcattt gccaaagcca
    49201 tttcagctgc tttaactaca aacattcctt gcgccatgca agaaagctca gaatcataag
    49261 cgacgacatt tagcccctca attaactctc ctgctgaagc cgcattctga aacgttccac
    49321 taataccgct tgatagatga atactaatta cagtatcaaa accttgttct ttcagctgtt
    49381 cgaacaagtg aatgaaatct cctggggcag gttgagagga agttgggaaa ttctcagctt
    49441 cttttacttt tctgtaaaaa tcagccgcag ataactcctc accttcacga taagattttc
    49501 cgtcaattat tacagaaagt ggcacgacat taattcgtag ctgctctttc acttcatttg
    49561 gcaaataagt tgtgctgtca gtaaccactg ctattttttc gttcatatag tccccctgat
    49621 atttctttag cgaatatata cccagccgtg cttgattgcc gttaccaccg cttgagtcct
    49681 atcattcact ttcatttttt gtaaaatact acttacatgg ttttttactg ttttttcact
    49741 aatgaaaagt gtctccccaa ttccgcggtt actttttcca tcggtaagaa gttgcaatac
    49801 ctcgcactct ctatgcgtta agatgtgtag tggcattttg acttcaggtt gttggtagcc
    49861 ataaacacct tgagaagtgt tagtgcttgc taaatggcgg tattcacgaa ttaatttaat
    49921 cgctacacgt ggatgaatat acgcgcctcc attatcaaca atttttacag cttctacaag
    49981 ttcatgggca tccatttctt ttaataaata accgactgct ccagctctaa gcgcttctgt
    50041 tacatattca tctgtatcat gaatagtcaa gacgattact ttgatgctag gaaattgacg
    50101 tactagcatt tcagttgcat ctagtccgtt gacagttggc atattaatat ccattaaaac
    50161 aatatctggt ttatattcgc gaacttttgc tacgatattt ttaccatttt cagcttccgc
    50221 tacgacctca aaagaatctt ccaactctaa aattcgcttg ataccttcgc gaaacaactg
    50281 atgatcatct acaatcatga ttttgagtgc cataatgact actcctcctt cacttatcta
    50341 atttcaccaa gcctctttgc aatcgaaaac atcatccttt ttaagtagca aaaccgctta
    50401 accttataat ccctgccata aaattggcaa ttaaacattt ctcttttaag tactatttac
    50461 tcaaacttac ctattttcaa cacaaactat accttgatta tactgcatag cccaagaaaa
    50521 ttactcctat atgcctataa aatgtaattg aaaaccagtc taaagtaata gtagttttta
    50581 ttataacacg aatttgccgt cacttcaccc actgcactta gaaaaatatc tatacaatcg
    50641 ctttgctttc ggataaaata aaagcaggct aaatgcatca acttatggag gttccttatg
    50701 ttggatcatt atttaaccat ccatagcgat ggaaaacacg aaataattat tgaaaagtcc
    50761 cgctttatct gccacattaa gcgagctaca acagaaactg aagcacaaac ctttattcaa
    50821 gaaatcaaaa aagagcatcg tgatgctacc cataattgtt ctgcttatat tataggagaa
    50881 aatgaccaat atcaaaaagc gcatgacgac ggagaaccaa gtggaacagc tggcgttcca
    50941 atgctagagg tcttaaaaaa gaagtcttta aaaaatgttg ctgttgtagt tactcgttat
    51001 tttggaggaa caaaactagg tgcaggcggc ttagtccgcg catatggtaa tgctgttagt
    51061 gaagctattc aagcaatcgg tattgtcgaa tgcaaactag ccactattgt tgaatgctct
    51121 tttgcttatc cacttttagg aaaaatcgaa aatgcgcttg aactaaaagc atatcaaatc
    51181 gacaaaaaag agttcactga aaaagtagta cttcatattt ttgttgataa cgacgaactg
    51241 caagattttt tcaactggat cactgagatt tcaaatggac aacttgaata taaagaagga
    51301 ccacaaaaat atagagaaaa ggatgtcact tagtatgtcc acaaacgtat ttatccaatt
    51361 accagatact attcttacta aacgaactat attaaaaaaa acctctattg cagatgctac
    51421 tacattattt gatatttggt ctgatgatga ggtagctcag tttatgaaca tcgaaaaatt
    51481 ctctactatt cttcaagcag aagaaatgat tcaagcaatt gaaaatgaac caaatgcttg
    51541 cagatacacc attttcacaa ctgatgattc tttacatgca attggttcgc ttggaattaa
    51601 tgatattaac aaaacgaacc agacaatcga aattggctat gaactagcaa aaagtcattg
    51661 gcgccaaggt tttatgtttg aaattttgac aacattttta accactgtaa agccctatct
    51721 tccctataaa gtgcttacag caaaagttct accagataat gtagcttcaa tcaaactact
    51781 gaaaaagctt ggttttgagc ttaccacaac tgggcaagaa ctagatttac attctggtag
    51841 gatttgtgaa atcagtaatt atcgaatgct actgaaatag gacaaatatt acatttttga
    51901 aagatatcat cttttttgta ttttttttcg agtaatttct gtataataac atcaaagttt
    51961 aaaaattaaa gaaaccgtaa atcgggcgta acattcttta atgcaacaaa tgatacaata
    52021 aaacttagaa aagtgactat aaggagaatt aatatatgag taaaggcact gatgatagcc
    52081 gaagaagcag caagaaatac aaacgtagaa gaaaaatttt attctggatt ctaattcctg
    52141 taatgtgctt agtacttgca ggtgtcggat acggcactta tctttttagt aaaacaaaac
    52201 tcgcagcaga taactcttat gataatgtaa ggaacggaaa agcctctaca cttcgaacaa
    52261 atgacattga acctataaaa gatagttttt ctattttaat tattggtgtt gataccagct
    52321 ctacacgggc cgaaaatggt aaccctcgaa gcgattcact aatcttagca acatttaatg
    52381 tcaaagattc acgcatagag atgactagta ttccgcgtga ttcttatgtt catattgaag
    52441 attccgccaa agacattgat aaatacacga aaattaacgc agctcatgct tacggtggtc
    52501 cagaacttac aatgaaaacc gtagaagaag aatttaagat tccaattgat tattatgttc
    52561 gttttgactt tgatgcattc ttaaaaattg tggatgcttt agacggaatt gatgtagatg
    52621 ttccagtgga cttcactgag caagattcta aagacaacgc cggtgcaatc actctaaaaa
    52681 aaggtcctca acaccttaac gctgagcaag ctttagcact agctcgtaca cgacacatcg
    52741 atagtgatat cgaacgtggc aaacgtcaac aactaatcat taaatctatt gtaagcgaag
    52801 caacatccat ttcttctgta agcaaatatt ccgatatcat tgaagttgtt ggagataaca
    52861 tgaaaaccaa cttaactttc aatcaaatgc tttctatcgc aaaatatgga atgacaaata
    52921 aaattgatat taaatccctt aacttaaaag gggatagcaa cccaatggac ggtatttatt
    52981 actacaaact tgatgaaagc tctgtgcaaa gtatttcgaa tgaatttgct gatgaacttg
    53041 gaattaaaca accattccct ggtgcagcac cgtattcaga cgaaagttct aacacaacta
    53101 gcacttctaa ttaaaaaaag accaacaact aataaatagt tgttggtctt tttattttcg
    53161 ttttcgatgt attttttgaa gtaaatttaa gattggtcgg taatcctcac caattaaccc
    53221 aataaattca acaataatct caatactaaa aattaataat aacagtaata acattgctcc
    53281 ccaagtagtg gaaaacgaaa atacgaagcc cgtcatagag aatagtaatg ccatacagta
    53341 gattagtaac accgtctgtt tctctgtaaa tcctagcgcc atcagcctat ggtgaatatg
    53401 agatctatcc gctgaagata tcggtatccg ctcttttagt cttcttacaa tagcaaaaaa
    53461 agtatctgac aaaggtacac ctaaaataat aagtggtact aacaatgaga tgaaagtaac
    53521 gtttttaaaa cccataagtg ataaaacagc aatcatataa ccaaggaata acgctccagt
    53581 gtctcccata aaaatactag caggcgggaa attataaatc aagaaagccg caactgctgc
    53641 tacaagaatt aacgcaaccg gcgcaacaaa aacatctttc aaaagcaaag ccatacctgc
    53701 aatggtcatt aaagcaataa tagaaatacc accagcgaga ccatctaatc catcaattaa
    53761 gtttaacgca ttcacaattg caacaatcca aataatcgat aatggaatcg caaaataccc
    53821 aaaatctact tgtccgtaga atgggacgtt aataaagtta atagtaatgt ctccccagac
    53881 agttacgcaa agagcagcta aaatctgtcc taacattttc cattttggtg ataaatcaaa
    53941 tatatcatct ataaagcctg tcgtaataat aattaatgct ccgaaataaa ttggcaagaa
    54001 acctgattta tctattgggg ctaagatcat ccctaccgaa aaacttataa aaatagctaa
    54061 tccacctaaa gtggctgtag tttttgtatg tttgtgtctt tcacgcggtg tatcaaccgc
    54121 attaattcgg aaagcaaact tcctaattat cggcaccata atgataccaa ctgcaaagct
    54181 aatcaatata ctccatatta gcaatatttt ttcagctcca tcctttattt agcaaaattc
    54241 tttctgttga tttagtatat ttttgtagca catctaaatc taaagcaact ccaacccctt
    54301 gaccagttgg cacagtgagt tttccttgat ttaatacaaa tgctggcgaa acaatatctt
    54361 cattaaaata acgatttgat gcagaaatat ctcctgggaa agtaaattcc gctctagcag
    54421 caagtgcaat attgtgagcc ctacctatac cagcttcaag catgccgcca caccagacaa
    54481 gcaaattatt atcgctacaa tacctcgcta tcttaagagc ctctgacata ccaccaacgc
    54541 gcgctaattt taaattaact gcctgacaac ttcctaacat atgagcctgt ttcaaatcat
    54601 ctaatgacct aatattctcg tccaaacaaa tacgcgtttt taattttttt tgcaaccaag
    54661 catgctccac aaaatcctta gttccaaatg gttgctcaat catttctaaa ttaaagtgat
    54721 ctaattcttt taacaacaag aaatcttctc tattatacgc tgaattcgca tcagccatca
    54781 agcttagatt aggaaatttt tctcgaacag ctttaacaaa ttgaatatct ttcttaggtg
    54841 cgattttcaa cttcactctt tcgtagcctt catccatata ttgactaact aactggacta
    54901 acgcttccgc actatgctgc acaccaatgc tcacgccaac cgtaatcgag tccttctttg
    54961 cgccaatcat tttagctaat gagagcttct cattttttgc aaaagcatcc caaacagcaa
    55021 gctccacagc cgctttcgcc atttcatttc cttgaatcca gctaaacatc tggttaacct
    55081 cttcaggagt tcgtatttct ttctgcgcaa ggattggcaa caaatgctgt ttaataatag
    55141 aaatagcagt gcccaaagtc tcttctgtat agtcaggtaa cggaaaagct tccaactctc
    55201 cataaccacg tataccctcc tcattcacta actcaataat ataaaaatct ttactgttta
    55261 gctcaccata acttgtttta aatggtgcaa taagaggaag ttctgcatga attagtctcg
    55321 cttcttgaaa atacatttac tcaccctttt tcaaacgctt gcgctctttt ctaataacaa
    55381 gcataaattg aggtattgca aaaaaacgtc tccatcttga aggattagaa aggagcctgt
    55441 atacccattc taaccttaat tttatccata tttttggcgc gcgctttaca ctatctgtta
    55501 agacatcaaa acttccacct acaccaataa aaatgccttt agtaaaatta gcaatctgag
    55561 acaaaatcca tttttcttga gcaggtgaac ctagagcgac aaaaatcaca tctggttgtg
    55621 ctacgagtat ttccttagca attgcttcac tttctaatac atcaaagtaa ccatgatgaa
    55681 caccacaaac aactgcctgt ggaaattttt cccgcacttt ggcctctaca acctcactaa
    55741 tttccggttt tgctcctaaa aaataacaac ttagtggctt atttaataga ccaaccatcg
    55801 tgtcataacc agtaacccgt tcctttaaag gctctccaag tttttctgaa gccattataa
    55861 tcccaatacc atcgggtaca atataatcag cttgccctaa tattgcttcg aactccttat
    55921 cagtacgagc atgcataaca atttctggat tagccgttac aacaaaccga cgctccccgt
    55981 tcttcgcggc catgtatagc tcctccacaa atcctgcttg cgtcgtatta tagaaaggta
    56041 tatttaaaat tgaaatttcc ttctttttca tatgtatctc ctaaaa
//
LOCUS       DASDYK010000006        52135 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.006, whole genome shotgun sequence.
ACCESSION   DASDYK010000006 DASDYK010000000
VERSION     DASDYK010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 52135)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 52135)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..52135
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.006"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..2183
                     /locus_tag="U0308_000406"
     CDS             <1..2183
                     /locus_tag="U0308_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEM2315421.1"
                     /translation="SGVTFKNIWTDKYIAYRNGILISNSETPDSFKLIRQADGSYVPE
                     LSGRYVSFSVGLVTDEAAGSKIDLYSTQEKLEQVSEAISVKALEEPAISAENISVYDK
                     RVKIDVIGEDKDNTTVKKDNKNELFVNVYKADGTTLVKSIRIDGLPTRDVSVTELSPD
                     SDYVVKVEGKYDLLDGKGEKDKVYFSETIKTEKSLPSMTSTDYSWNPAYGQRAIKGNI
                     HFTDESSVLTNIEYRLYDAATISSNLSNLVALEQELGNKTPVATFDNMTNSPEFSIYN
                     SSGAQNFVSGKTYVIAAYMKTSLTRAPIFLSDAKELYISPPSGVSAPITLENVSTREA
                     TLKFSYNDPQSYFVGGTNKEFQYVLKNTTNGKEIKKGSFQGGNTASWINTFEELEPAT
                     GYTLTISTQYDNLNGGLVRAWNTSFNFTTDDEYVTSNSLTIQLDAGAKVVKLQAKEVK
                     PGSTTIENIKMEFYELIDYGGNNEHNQLVETKNITLPSSYPATIAADFNVAGKKKNQS
                     FLGKMIVTYRTPTNEVKTYEKTSNFITLQEDIAAGLKAFKSVRATNKTLEVKLDTPQV
                     NLTDKGDYTYELKGENGEVIDTEKVAAEDISKTVSLSMEPTSDYTLTVINPDNQPVAL
                     YQGNNEENNLKAEINKDSFTLMSNNTADAETTMTVTVEPKELTAWQTVQSWFGKDFTE
                     TYNIQKDELDTGVKIDANYQDTKVTVEETKSGKNFGIIELEESK"
     gene            2180..4489
                     /locus_tag="U0308_000407"
     CDS             2180..4489
                     /locus_tag="U0308_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315422.1"
                     /translation="MKPTWKIGIIVAAVPLIIIAVVLWGSFKEARYNLVSLPDDGVVL
                     NNEQETLQFQKGNTLYRSWNSDQLIAKNDKEDTRNEIMESTILYLNKEALMFTKSVPV
                     IDTNGVSSKLKGRQVYQQTNSSYKYKNSEITENSIVKLANRQYYLNADATLYLGGKEI
                     KKVSKPLLLIDKTGSVTIYENKKKSRFLGHMTLKVNDKTVLDASNETYTVGERKIDLA
                     SFGGTDNEKIVVKEDKKKTAESAKEKESAKKTASNSSQSENESNQTTKGTGNQLNATK
                     KYGNNLNVGNGTSDSEPNDGKDTKNNGSGSNANGGTNQSDLNEIDNYEAILRKIEDLN
                     KKLERNIPVLRIGYIAPGVTSVKVNYNYVDPNNTLIGVTKISAVDEKTGKTVNTQYVS
                     AVDTEATLKGLSPNGKYHLEFTYQYDLGTNKGIQEVKMQSDSFTTQTVAAIYQMQSVT
                     STTMKVNIALDAQIDDVKRARIKVTKADGDFFYMNVSANFLNGNGETLNVTGLSPKTA
                     YQFQTIIEMKNGETIELNSSEKYYTMQATVLRNLRASQSVNKVLQVQYDWSSADYTLN
                     QATIELEDEEDKTEVDYQIVNQEKGNIHLVPDTKRELINLKAKLVLKTTNNNTKESKT
                     FEYPVKQEIEYDKQAKLTMDLTPFQTEENSELQSEKQDLVAEKETNGNDLTAKMEDVL
                     APQNATYDMSFSMQRKALETYQLEFERKIAGIDDDNWTVWKSQQVTTDEAGQVKVTET
                     ISKLAKESFDYRVAVYDAQGALQLYVYQK"
     gene            4546..4788
                     /locus_tag="U0308_000408"
     CDS             4546..4788
                     /locus_tag="U0308_000408"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463621.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. Subunit C is part of the
                     membrane proton channel F0; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit C"
                     /protein_id="HEM2315423.1"
                     /translation="MDLVVACSVIGAALAIGLATLGAAIGQGIAVSRATEIIGKNPNA
                     KKEVMGGLFLGLLMIVALMLFALAIAVILLWVNPFI"
     gene            4800..5831
                     /locus_tag="U0308_000409"
     CDS             4800..5831
                     /locus_tag="U0308_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEM2315424.1"
                     /translation="MEKMIQTIILYSVFAVGFLYLLHFTLRKLENILTSFFYEVSQDQ
                     SLEKESLLRRLKRQKVATTQEEQKNRQLAIESEQKEELFLEEIDQLIAQNKSYEQQLQ
                     AWENEKPKQIVEVPRFETTPHAPYKSLSSYINEIFQQVFIESEEDEARLFTEAIREFD
                     ALVRTEKIRCALPYKVILQLFEMYSPDQLHLFAQSFQRYSERSSKLPVKQIYQSSYLS
                     PEQKLKVMQEEGTLDELDAEFIQFLFYMMTHYSYRQTRNLYRNFLEVYNIHFYTGLIC
                     IHVASKDSANHFEKLWQPAHRSYKIEYQVQKELIGGVIIQYGSKSIDMSYQELIKRST
                     EKMEAEVKL"
     gene            5828..7324
                     /locus_tag="U0308_000410"
     CDS             5828..7324
                     /locus_tag="U0308_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEM2315425.1"
                     /translation="MKTIHFDMNKYETHVDLEYLKEHGRVEKISDGVIFCSGLENAAL
                     HQAVLIDERHRGVILELNEEFVGIGLIDKTNDILEGMHVGVSGKFIEVDLFEEMAGRV
                     IDTTGKMLYEESEEKPTATSPLFCVTPAIMTIDSVTRPLNTGLAVIDSITPIGRGQRQ
                     LILGNRQSGKTQIAVDTIINQHDQNVHCIYVAIGLKAAYIAEVIETLRNHGAMEYSTV
                     VATAASDSLTAQYLTPYAGMAVAEALRDQGKDVLIILDDLTKHADAYRAITLLFNRPP
                     GREAYPGDSFYIHSSLLERAVQMNEEHGGGSITAIPMIETLSDDVTAYIPTNVISITD
                     GQLFLKSDLFNRGQKPAVDVGVSVSRIGGDAQHPIIRKLSKNLTLILSQFEELKELLD
                     FGNALDDGSMKMVSDGRLLTELFKQKILSPLSVTELIVILYAFQNGFLTKIPPANIQT
                     FKDLLLEKTHMHKDFESFSAQIETINELNESHIEMLEEIIREAGRLFS"
     gene            7321..8190
                     /locus_tag="U0308_000411"
     CDS             7321..8190
                     /locus_tag="U0308_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEM2315426.1"
                     /translation="MSSIDQARKTIKALNSTYKIVHVTELATLGKLSALREKAEAAVS
                     YYETILKSLRWVRKTMYTSNNQVKEEKNVTAIAITSERGLCGAYNSEVFVEIDQLIES
                     LGEQVTINWVVVGEQGHRYLTKLGQNITSYLQFSLENIDLETTTAVTADFIDLIHSEQ
                     MDALYVIFTKYLNAVQSEAMCEKIYPEIPEDSNTEEIEVDYVLDFETDDEQVEQLLLE
                     NYLCGLLYSMFRYSVASEYCMRRIAMKQAKDNIQKQLEEAIFNARKQALQQKTGELLD
                     IISGAQTIRKDEE"
     gene            8191..9561
                     /locus_tag="U0308_000412"
     CDS             8191..9561
                     /locus_tag="U0308_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEM2315427.1"
                     /translation="MKKNTGTIISISGFVLKIEFNESELPEIGFALEYHTHQGTYLAE
                     VVQHTGINTVSAIAIGEVSGLARGTEVVNLGHPIEVPVGETVQGRMLNVYGKAIDGKP
                     EPAAEVKWPIFRDQPLLRELDTNKEILYTGIKVIDLICPILKGGKTGLFGGAGVGKSV
                     LMQELINNISMLGGNSVFTGVGERVREGIGLYKELEASGVLPQTTVVLGQMNESPGVR
                     MRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQGKIPITGGYQSTLSK
                     EVGDFQDRIASTKNGSITSIQCVFLPADDIDDPSAVATFSHLDSTIVLERSIAALGIF
                     PAVNPLQSFSRALNPTFVGERHYQLAAQVKFILQRYMELQEIINVLGMAELSDEDRKL
                     VHRARKIRNFLSQPFYVSEKFTGTEGTFVEIEDLLGSIERILNGDYDERSERDFLFIG
                     SYKDLK"
     gene            9574..9906
                     /locus_tag="U0308_000413"
     CDS             9574..9906
                     /locus_tag="U0308_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEM2315428.1"
                     /translation="MKLKIVSPMGQFFEGEVEGFVINTKEGQQTVLEEHIDCLSFFDY
                     SEISILDAVASDPIFVALGYLHLVQNEANIMAQFASTDAEQAERIFERLNKRKQTESR
                     RSDDKRIF"
     gene            9887..10447
                     /locus_tag="U0308_000414"
     CDS             9887..10447
                     /locus_tag="U0308_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315429.1"
                     /translation="MTSEFFSTLLLIIGLLLGFFLAILLILVGIRRFLCSAEEPLKRI
                     QRYQLWHNRYQLNAEVTSFLIVIGASLSVSLITLQITAIPFQYTVLIFWSSWLFHLLS
                     FWKKIRVPKKMKNEMKQLAGFLLITVLYFVGFFAMKSVHFSIIQVADFPGVIQFGIRT
                     YLTICSFFVACGALIVWQRIYVKLLK"
     gene            10622..11254
                     /locus_tag="U0308_000415"
     CDS             10622..11254
                     /locus_tag="U0308_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2315430.1"
                     /translation="MTFLEFHQLVKEDLLIYSWIIKNFHLTRQKLMAGGEITMNREQV
                     IVMEKGLLVQVNEEGKDDLYRVFIDQRIIFTTKGDITLTALEDTTYSIIRAEELIGKL
                     EDQHLLPTFFLEIAEDFEKGLDWQRTLISVDPAERAEMILAKIIERYQINSENKPEFP
                     RWLRINVLARFAKCSVSTMSSVVNELVNEGDLNIKGTPWLLTRPYQATCA"
     gene            11552..12517
                     /gene="manX"
                     /locus_tag="U0308_000416"
     CDS             11552..12517
                     /gene="manX"
                     /locus_tag="U0308_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HEM2315431.1"
                     /translation="MVGIILATHGEFAEGILQSGTMIFGEQENVKAITLMPSEGPEDI
                     KAKMEAAIASFDSQDEVLFLVDLWGGTPFNQANGLYELHKDKWAIVAGLNLPMLIEAF
                     SSRFTMESAHEIAANILAPAQEGVRVKPEELQPQVTATEQPQAEIAAVGDGKIEFVLT
                     RVDSRLLHGQVATAWTKATHPTRIIVVSDAVAKDDLRKKLIEQAAPPGVKANVIPVQK
                     MIEISKDPRFGNTKALLLFENPQDVLRAIEGGVEIEQVNVGSMAHSVGKVVVSKVLSM
                     GKDDVETFEKLKEKGVKFDVRKVPNDSSANMEDIIKKAKHELKTQ"
     gene            12541..13347
                     /locus_tag="U0308_000417"
     CDS             12541..13347
                     /locus_tag="U0308_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HEM2315432.1"
                     /translation="MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNL
                     TACIILGGTLQMIALGWANIGAAVAPDAALASVASAIILVLGGQGVAGIPSAIAIAIP
                     LAVAGLFLTMIVRTLAVPIVHLMDRAAEKGNIRSVEWLHISAICMQGIRIAIPAAALL
                     FIPADSVQSFLEAMPAWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAA
                     ISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGDILNDY"
     gene            13369..14280
                     /locus_tag="U0308_000418"
     CDS             13369..14280
                     /locus_tag="U0308_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter family
                     subunit IID"
                     /protein_id="HEM2315433.1"
                     /translation="MAEKIELSKRDRLRVAWRSTFIQGSWNYERMQNGGWAFSMIPAI
                     KKLYKTKEDRSQALKRHLEFFNTHPYIASPILGVTLALEEERANGAEVDDVAIQGVKV
                     GMMGPLAGVGDPVFWFTIRPMLGALGASLALSGNILGPILFFVAWNVIRWGFMWYTQE
                     FGYKAGSKITDDLSGGLLQDITKGASILGMFVLAALVQRWVNIQFAPIISKVKLDEGA
                     YIDWSHLPQGAQGIKTALEQQQAGLALSEIKVTTLQNNLDNLIPGLAAVALTFLCMWL
                     LKKKISPIIIILGLFVVGIVGHLIGLL"
     gene            14407..14796
                     /locus_tag="U0308_000419"
     CDS             14407..14796
                     /locus_tag="U0308_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF956 family protein"
                     /protein_id="HEM2315434.1"
                     /translation="MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRK
                     FVQIPWEEVDQVIVSVMLKGKWIPRYAIKTKRNGTYTFASKRPKEVLRKIRVYVDPAN
                     MVSSLSFFDVMKRSFRSIFSKKKNKNK"
     gene            14918..15268
                     /locus_tag="U0308_000420"
     CDS             14918..15268
                     /locus_tag="U0308_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2200 domain-containing protein"
                     /protein_id="HEM2315435.1"
                     /translation="MKKPRIYTMSFASVYPLYIQKAEKKDRTKEEVDEIIFWLTGYDQ
                     DSLQQAIDQAIDFETFFAEAPKMNPNASLITGVICGYRVEEIEDKLMQQIRYLDKLVD
                     ELAKGKKMEKILRK"
     gene            complement(15309..16826)
                     /locus_tag="U0308_000421"
     CDS             complement(15309..16826)
                     /locus_tag="U0308_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HEM2315436.1"
                     /translation="MRPTNVYTPEDIYLKDRTGFNNGNLAYQYSIYRALWNDDVEIHA
                     DGLSSNPNLAEKINENYDLYVMPLADAFRDDFRPVLRNYTQLIRKLKIPVIVTGVGLR
                     ANYEPQLDEGFSFDEDVTNFVKAVLEKSAQIGVRGQITADYLKKLGFNAELDFRVIGC
                     PSLYTFGREIKIRDFHLTDQSTIAINASPTSSEIAINFLNNMITTYKDYHFIPQHLDE
                     FHLMYAGGPDISSDINGYPTNIQHKYYQEGRVKYFTSMPSWFDFVKKVDFSIGSRLHG
                     NVIPTIVGTPNISFVQDARMRELASYHALPHVTIDELEKTNNLQELLTKVDLKSAEKV
                     QARNFDNYIDFLDTNGLNHIYKYDKNRKSAPMDELINSITFPTSPDPISILNPQEMLN
                     RVKISTNLLKERHDFSTRYRVNLVNNQLTQLKKTTSEQNKKYQQKITETQEKNQQLEK
                     QLTDTKQKLQLTINKNHELTNKIRHYQGTLNRKSVKTTLKVANSLANLKKKVSRS"
     gene            complement(16941..17234)
                     /locus_tag="U0308_000422"
     CDS             complement(16941..17234)
                     /locus_tag="U0308_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2315437.1"
                     /translation="MKKLNELSKSDLLLIFQALSDPIRLDIFLCLLKSKEKRFSGTTY
                     NISKSTMSHHIKLLKEAKLINLRKEGTTHIYSVNEALVEEIGYFFDACKHNHK"
     gene            17346..17636
                     /locus_tag="U0308_000423"
     CDS             17346..17636
                     /locus_tag="U0308_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEM2315438.1"
                     /translation="MLHIEAQITVKKEQTEAFLQAAKEVIAASRAEAGNHGYELVQST
                     ENETVFYMLEKWADMEAIQQHNDSEHFKKFQKLAADFVAKELEISVLTPLAR"
     gene            17650..18282
                     /locus_tag="U0308_000424"
     CDS             17650..18282
                     /locus_tag="U0308_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEM2315439.1"
                     /translation="MTYVNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPS
                     SVNMQPWRFVVVESDAGKEKLSSLVRFNTRQNESSSAMILVFGDLENFENGEKIYGES
                     VERGLMPAEVKEQQMAKLSQYFASIPRTEAERVVLIDGGIVAMQLMLVARAHGYDTNP
                     IGGFERKEVAEAFNMDPERYVPVMIVSIGKAKNSGYQSYRLPITDVTTFA"
     gene            18378..18749
                     /locus_tag="U0308_000425"
     CDS             18378..18749
                     /locus_tag="U0308_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315440.1"
                     /translation="MTIKITRKTGIGSGITPVKIRIENEEIVKLDNHQSHFFMPKMEK
                     TKVCVTNWFYGSQEAVLENNNDVIVRINRKALILNYSMFPFLFFGLLATSWESTVIAL
                     ILCLASFFYSRKHWFEFVKIK"
     gene            19040..21310
                     /gene="chiB"
                     /locus_tag="U0308_000426"
     CDS             19040..21310
                     /gene="chiB"
                     /locus_tag="U0308_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitinase ChiB"
                     /protein_id="HEM2315441.1"
                     /translation="MKKLFSITSVVLLVLSLVVVSIGAEPKRAKAAENVPQYRNVMYY
                     GDWSIWGGEGNFYPKDIPADQLTHLNFAFLDFNSNGDLVFTDKDAAVGAPVGQEGVQW
                     GGANAGVLNAIQDLRAQNPNLKIGVSVGGWSKSGDFSTVAADPTKRANFVKNVMKFVK
                     YTNMDFVDLDWEYPASVRDADLVDNKNDEGTPNAKPADKQNFITLLQDLRTALDKQGV
                     DINKKYELSVALPAAKSTLENGIDVANLFKVVDFANVMTYDLNGAWTPNSAHHTALYG
                     NPKDPNYDSGFSVDQTVKYLKEKGAVSNKIVVGAAFYTRGWNKVAAGTDTALPGLFQA
                     AEKTNKDADGSLTYGANNENPIKTGDGGRAGGVWAYRSIDALKAKTPTLKEYWDDTAK
                     APYLYSKETGEFYTYDNTRSIGYKAQYVKDNNLGGMISWMQSQDKTTTSTKRDELTKA
                     IKSGLFGTNAIPQNAITYANLNVVATVKPYSENGVGYEITITNNEKADETNEVLKSTE
                     LSFETVKLPKFYIPVKAGETLTAGDYKAGTVTTSGGNTVVDLASVYDAQQIPQGASYT
                     FRLKSSASSVDVANISKIDLTQRMVKSSVEFGKQTIFGGGTVVPDPSDTEAPTVPKAL
                     TSSNVTDKSATLTWTASTDNKAVAGYKVYRNGTEVGSVSGTTFTDSGLTAKTAYSYTV
                     KAYDAAGNFSAASSALTVTTLDAATPPATPAWDAAKTYNKGDRVSYKGKTYEAQWWTQ
                     GNEPGAEQWGPWLLIN"
     gene            21413..22315
                     /locus_tag="U0308_000427"
     CDS             21413..22315
                     /locus_tag="U0308_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM2315442.1"
                     /translation="MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAEELVAQMV
                     EKWRPYSTEVKGIAVSCPGVVDTEKGVIYQGGSLLFMHEKNLAEMLARECHVPVVLQN
                     DAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSF
                     DTKKLRGTFFGRTGSAVELIKRIASKKNLPNKKDGEQVFELINQGDEEANAIFDVYIY
                     ELTSQILNIQYLIDPEIIAIGGGISAQPVVVDRLNEAVAEIKDANPYHAAQPKIVTCH
                     FQNDANLYGALYNFFLQMDVQNKR"
     gene            complement(22340..24121)
                     /locus_tag="U0308_000428"
     CDS             complement(22340..24121)
                     /locus_tag="U0308_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2315443.1"
                     /translation="MARNKFDIDEELETAFSAAHLKRILVYVKPYQKSIYITLFVILL
                     ANVATMIGPYLTKIVIDDTIPNKNMTQLFWIAIIFIVSVVVTGLCMRYRIRSITLIGQ
                     DILKDMRTAIFGHLQKLPFSYFDSRPHGKILIRVVNYINMLSDLLSNGLINLISDILS
                     VIVTLGFMLMIDPVLTLYSLALIPVLFVIVMVIKTAQRKAYQVLSNKQSNMNAYIHES
                     IAGIKVTQSFSREEENFEIFTEVSNEYRRSWMKAVKIQFLLWPGVQNIAVMTTCLIYF
                     VGIKGYGVDVSTGTLIAFIGYVGNFWNPVINIGNFYNSLITATTYLERIFETMDVEPD
                     IKDVPNAKKMPPIVGNVDFKDVYFRYEEGVDILKGINFHVDAGESIALVGPTGAGKTT
                     IINLLSRFYNINSGEILVDGENVEEVTLRSLRSQMGVMLQDTFIFSGTIIENIRYGKL
                     DATEEEIIAAAKVVRAHDFISGLKDGYYTEVKERGSTLSAGQRQLISFARALLADPKI
                     LILDEATSSIDTQTEILLQEGLERLLEGRTSFIIAHRLSTIKNSSRIFYIDNGRIQEA
                     GSHEELMAQHGYYYNLYQSQFDMLQAL"
     gene            complement(24114..25856)
                     /locus_tag="U0308_000429"
     CDS             complement(24114..25856)
                     /locus_tag="U0308_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2315444.1"
                     /translation="MESMKWIWQYVRKYRLLMIGVFILIFIASGISIIYPLLGGKVID
                     DVVYQNKTNLLIPLLLIMIISTIIRTICRYTYQIMCERIGQNSLFRIREDLYKKLQSL
                     DFDFFNNTRVGDIMARMTGDTDAIRHFVSWVSYNILENVFLFSFAIIIMAAIDWKLTL
                     ALVIVTPLIAILTMKMSSKAQPVFYEIRESFSRLNSMVEENISGNRVVKAFAREDFEM
                     KKFHEHNEDFKKRNLDSADVSRTYLPVLDSLAGMLVVITLIFGGYLVIKGQMTLGDLV
                     AFNGFLWMLNGPMRMSGWLINDVQRFIASSFKIQDMMATDAKIPIHAEKPAPSLQGHV
                     EFKNVSFHFEDDPNTDVLKNISLKASPGQTIAILGETGAGKSTLVNLICRFYDPTSGE
                     ILIDGVDARKWHVRELRNHIATVMQDIFLFSDTIEGNIAFGAPDATMEDVRRMARIAD
                     ADHFIETMPESYDTIVGERGVGLSGGQKQRISLARALLKNPSILILDDTTSAVDMETE
                     VKIQGELKKITENTTTFIIAHRISSVKEADEILILNHGEIIERGTHSSLLAEKGYYFD
                     IYNKQLGTEANVNG"
     gene            25999..26832
                     /locus_tag="U0308_000430"
     CDS             25999..26832
                     /locus_tag="U0308_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM2315445.1"
                     /translation="MLKINTTTFNPQILYIANCYTNEVRVGENHHHDFLEISIICEGN
                     VIYDIEGERVKLGKGDMLIFNPGVNHYDITEPGMTNAQLHIGFRNFALEGYTRNTFPF
                     KKAFLRKKEEESAILSISKQIIEEKDAEKPGYDLILKAFVMQLIIHVLREATPEQLEN
                     NGVKLSTDEQQKQILVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGES
                     PINYLIKIRLTRAEELLKNKDVTVKQAANMVGYNDAYYFSKLFKKYYGFPPSENWRKS
                     S"
     gene            26867..27982
                     /locus_tag="U0308_000431"
     CDS             26867..27982
                     /locus_tag="U0308_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2315446.1"
                     /translation="MEYKKALAFIKSNSILEQEEGTEVIFKQAQETVRGNLDPFLLKD
                     LKQHLGGTNDAIKEAPQEIQMPDFSNLEIATAAALQMRATMGSPNIDLSNGVTTEYRV
                     VEGDYGDIPVRIYRHEEATKPVPAFIFYHGGGFVGGTPAVVENFCKGIAEKLPAVVIN
                     VDYHLAPEFPAPAAPKDCYRALEWVVEQSDELGIDASKIGVSGDSAGGTLAAAVSYMD
                     YEAETNYVGFQALLYPALTLVDEDNDKYQWDISKFGASEETLPLVAPGIIGMNSSGEL
                     LRTAYVRDENPASPIYSPLSAVDKSIYPPTLIASAEFDALRAFADIFAKELRASGVQT
                     KVIVYQGMCHAFIDKYGIFPQAEDVADEIVQMMKEIF"
     gene            28089..28796
                     /locus_tag="U0308_000432"
     CDS             28089..28796
                     /locus_tag="U0308_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEM2315447.1"
                     /translation="MGLMKFQLFIQPKLDVLQGNIVEYEILLRDDSAVPRFPLSELEA
                     VLADEELYLAFSEWFSEAFLDVLKKYPNDRFAINIAPQQLFYIETLHWLDKLKSESHR
                     ITVEMTEDIFDVPGHKRHLNANDKNAFILNKIKVIHGLGYHIAIDDVSCGLNSLERVM
                     SYLPYIIEIKFSLIHFKNIPLEDLLLFIKAWANFAQKNKLDFVVEGIETKETMTLLES
                     HGVSIFQGYLVNKPFPV"
     gene            complement(28766..29461)
                     /locus_tag="U0308_000433"
     CDS             complement(28766..29461)
                     /locus_tag="U0308_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2315448.1"
                     /translation="MFHTIDFSDIFSSDYSNKISFKKGEIIHSYRDYEEKTPQIGAIL
                     EGTAVLEGPTNEGRWMINALIGQHSLFGMESLLETKTAPELTEYRVRALENGTVLFID
                     REFLLNYLYANPQFFHLILDEVIVRYLFTSKNYKNINQAPIVKVTRILVEIIELLHLH
                     QTEGAIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLLLSKKPITISSHENLLNQ
                     IDSFQTGNGLLTR"
     gene            complement(29680..30132)
                     /locus_tag="U0308_000434"
     CDS             complement(29680..30132)
                     /locus_tag="U0308_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HEM2315449.1"
                     /translation="MYEKLVNKYQDEVTIREEKMPYKLPGLYLNGTIFISKDQSSIEK
                     GCVLVEELMHYKYTVGNITKQETIMDKKQEIFARRKGYEELIPLDDIIACFYLGLREY
                     FEVAEFLEVTEEFLRHTVTHYAEKYGPMYDYGGYFINFGNSIDVYKKF"
     gene            complement(30138..30473)
                     /locus_tag="U0308_000435"
     CDS             complement(30138..30473)
                     /locus_tag="U0308_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2315450.1"
                     /translation="MELNKFVGNKIKQYREERGLNQEALAEKLHTTRQTISRYENGDR
                     KANQDVLFELAKIFNKRLDDFFPERNLPPVDERLVTIAAHIDDDVTEEEMRDILAYIE
                     MKKKLHRGM"
     gene            30690..31118
                     /locus_tag="U0308_000436"
     CDS             30690..31118
                     /locus_tag="U0308_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315451.1"
                     /translation="MDRKLLKEKQIQLIFQLEQEENRFIRKRLIEELEFFEALGDREK
                     GLLTAEQKLLILTPSEYREYKRTKSDVQISRLIGVSRSSLAEWKRKKGLNRKKPQPVQ
                     QEMIDVLAFHLDKTKDEIGALPASAIECQYEAFVINEAHN"
     gene            31130..31546
                     /locus_tag="U0308_000437"
     CDS             31130..31546
                     /locus_tag="U0308_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315452.1"
                     /translation="MQVLVLPENKDINYIKTVQEVKRFFADFERFRMITGLSKKPQLL
                     RNGFLEEPQFAPVAFSARHNKEVILEARWLVEKYTEMLNQMDDLYRTILMECYVERKQ
                     DVAVMMDLPYEIAQFKRIKKRAVLEIATLMGILVRK"
     gene            31826..32215
                     /locus_tag="U0308_000438"
     CDS             31826..32215
                     /locus_tag="U0308_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5072 family protein"
                     /protein_id="HEM2315453.1"
                     /translation="MKSLSFMRVLEAVRTMLQEKGGLDVSIVMRDQVEMPTTMIEMID
                     QEEEESQTAWKEKYRFAIHHYTNETDLAGVEMIDTLIQTGFTLPEGYKLIAVRHYGKQ
                     NLVKENTLIHAKTSFEVSICRELKVKI"
     gene            32228..32740
                     /locus_tag="U0308_000439"
     CDS             32228..32740
                     /locus_tag="U0308_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail protein, TP901-1 family"
                     /protein_id="HEM2315454.1"
                     /translation="MAFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVAGQQG
                     LTVNRSKDSIEITSKDTVGGWKSKIGGMKEWSIENDGLYVADAESHKELAKYFESDSP
                     VCVKIINQASKKGLFGGLAIVADYSFEAPFDEAMTYSVKLDGMGALVDLTITEGGDQM
                     PGETPVAPAE"
     gene            32788..33090
                     /locus_tag="U0308_000440"
     CDS             32788..33090
                     /locus_tag="U0308_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation and condensation protein B"
                     /protein_id="HEM2315455.1"
                     /translation="MFEVNDTTYILRFNKQKVKTVELTSGISLVAALTANKGILSYQV
                     IETLFVSGLVEEKGLVPVKQKEALEIFDKLVEEQGLISLNVAVIEKLQEDMGFLFR"
     gene            33132..33536
                     /locus_tag="U0308_000441"
     CDS             33132..33536
                     /locus_tag="U0308_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine racemase"
                     /protein_id="HEM2315456.1"
                     /translation="MDSEMNHDFDLEKQFAFFVVNFQMSKHDFEELTEVEKNFIMKEW
                     ENKVIFESTMLRNAVLNAEQNLNRKRNSRFIDLHKKRQKKADVNYTVNALQAISDNEA
                     KEGKAWIDRIYGANGLRRPKNKEERGKVNGGF"
     gene            33523..35391
                     /locus_tag="U0308_000442"
     CDS             33523..35391
                     /locus_tag="U0308_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003732223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315457.1"
                     /translation="MADSKSFTFELNESVLTAQVGRLDEMAMVVERRFSELKMTIEDV
                     GNADPGSKISESLGGLQSGLGTISSAFGQLGSSSEAITSGFGTAVGSVGGITDAFKNL
                     GSSVQNGTLFSSLATGIGGMSTMLGGVSGGVQGITNLASGFMELKKHLGGLMSSIGGV
                     GGIMGKLTSPMGLVIIGIVALVAAFAYLMTTNESFRNTVMSVVTQVAQLFGQLVASLM
                     PIIMQIVTAVMQIGAALMPMVMQFISFFAQLLAQLMPFINMLISMLMPVIMQIVQVVM
                     SLVSALLPSIMTVIQGIMSVIQFLIPIIMQIATVVVQIVVTIISYISKIMPIVMTIIG
                     VIVSIITTIISYVVIIATTIASVIGKIISFIASVITAVIGIVQPIIGFITNIFTTIVT
                     IIGAAFQMVFTVASKIWNAIMTTISGIIEGIKAVITGISTTVSSVFNGVKRIITGVFD
                     GIKSAWGGLTDFVGNIFDGVSSAIQTVVDNVKGFVNVVIRGINGAIGLINKIPGVEIG
                     KIPQLISGTTNFQGGFARMNEGGRGEMVVLPSGSQVIPHDATMKYARESARGNKSILY
                     TSQGADLARVENLLERLLQKNPVIKMDDKVVAEVVSRNQANSFDQYNYTMGGAAYS"
     gene            35388..36206
                     /locus_tag="U0308_000443"
     CDS             35388..36206
                     /locus_tag="U0308_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HEM2315458.1"
                     /translation="MSDLFLELNGKVHSLSETFPGLSVQEVSRQSPQLSMETAEIAGT
                     DGVIPGMTQFKPFIFSAKCNLQALDIPDYHLAVREIYEFLFQRDSYYIWSDQMPGIRY
                     EVHPKPVDFSRESDRVGLLTIEFDVFKGYAESRGTSLDPMTFEVDLWQMGMNLSNRDD
                     LFYIFKENTFRVYNAGSDRVNPLMRHELDIAMTANGTPTIHNLTTGESFEYRKALQKT
                     DVLLLNNIYPLVNNRRVGKDTNHGIITLEKGWNDFEIKGVTDVTIAFNFPFIYR"
     gene            36216..37352
                     /locus_tag="U0308_000444"
     CDS             36216..37352
                     /locus_tag="U0308_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM2315459.1"
                     /translation="MDYVIIQSMDKEVEEILTDIDYGSFSYDYEKNTSRAISFTVNKT
                     KQNAAIFDLVGNEAILTYQGQQFVIKKCTPKSIGGTISKQITAQHICYTVQDHVQYNV
                     KSGRKKYSIQTVLEFALQDNVLGFSYEIQGSFPLVELEDLGNKNGLELVNLCLEEFGA
                     ILFADNKKLYFYDEKSWYVRTEKQFRYLYNTEEVSVDTNTDNLKTEIKCYGKQKENAD
                     KLTGDNKYMAVVTYTSPNEAIYGKRMANAKSDDKITNNDDLLIFAKKQILDVPETALT
                     ISYKGKEPVLERDVWYFIHEPMGFETEVKVTKIKSSHPWSKKFQEIGFSNSRRDMVRI
                     QTQIANQVKKTSVDTNKINSFSSIAMNAYDSRILTEVVGVVDGD"
     gene            37342..37641
                     /locus_tag="U0308_000445"
     CDS             37342..37641
                     /locus_tag="U0308_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA-adding enzyme"
                     /protein_id="HEM2315460.1"
                     /translation="MATEIRVLKNVDDTVFYPKTHVTAVEGLDSATTTTSGLMPASDK
                     TKLNGIEANAEKNNVTAIDIANWNKKQDAILVSENGSNFKITVTNAGELKATKVE"
     gene            37656..38231
                     /locus_tag="U0308_000446"
     CDS             37656..38231
                     /locus_tag="U0308_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HEM2315461.1"
                     /translation="MKLDLWKWEMLLQGREFRNKTNDNWQKLMDWSDFISTGLSAIYV
                     YVNKADATLNNKIDTVDKAVNARVNELISGTEQLSEVVDARVDAFGARFPVLRERLNQ
                     EQVIYNKKSTVQFDVNTIINMEKQDIGLLTSKTISEAQTVCFLNISSLNEDADIVLEK
                     TGETSFSENLTSLVFAKIGTNERYQMEPVGA"
     gene            38246..38725
                     /locus_tag="U0308_000447"
     CDS             38246..38725
                     /locus_tag="U0308_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315462.1"
                     /translation="MTEIKRMLQTKEDNSKEQFYPETHVAGIVGLTEYVSGQLPTGVV
                     SVNGKAGRVLLDAEDVHAAKKSHNHEVATYTTDGFMSSFDKQKIDQLVSPEAGVTSIN
                     GKTGIVDLFAADLDAAEINHTHAEATTTESGFLAKEDKEKLDAMQIIALETIKEVIE"
     gene            38722..39258
                     /locus_tag="U0308_000448"
     CDS             38722..39258
                     /locus_tag="U0308_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315463.1"
                     /translation="MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKATWNE
                     KETTAGAEQKANTALNSAKDYVDTIGKGTVIFKGANIMAAGQKYTWNSSKLKFGITLL
                     FSRYDSANNTPLDYYYHSVFLSKAQLAELAGKGLLVPMPSATYGERKYLYVSETEVAG
                     HNDNTNNASWALRQLTVM"
     gene            39277..39699
                     /locus_tag="U0308_000449"
     CDS             39277..39699
                     /locus_tag="U0308_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin family protein"
                     /protein_id="HEM2315464.1"
                     /translation="MEVILKIGILGFGAIFGYLFGEVDLLVKVLVCFIVADYISGLLA
                     SGYLGELSSKMGFKGIAKKIAILILVAIAHQIDLILGTHNTTRDAVIFFYLANELISI
                     LENFVRMGMKVPEVLKNLILIFDSKSGDEEEKHDKDMD"
     gene            39680..40408
                     /locus_tag="U0308_000450"
     CDS             39680..40408
                     /locus_tag="U0308_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEM2315465.1"
                     /translation="MTKIWIDAGHGGKDSGASGNGLVEKNWVLTVAKQLQTELVKAGF
                     EVGMTRTNDTFYELSDRAKKANSFKADLFISLHFNAGGGKGYEDYIYTSVPAATVEIQ
                     KIIHKNIIAKVTKHGMNDRGMKKANFAVLRETAMDAILLEAGFCDSTDALILEKKAYQ
                     TDYCLGIVAAVQEIFGAMVTKYRAGKYLTSDDAISGTNIKGYLEAGTKVFVYKETEKT
                     LNLTTTKGVPGSWVLKTEVNTGKR"
     gene            complement(40446..42800)
                     /locus_tag="U0308_000451"
     CDS             complement(40446..42800)
                     /locus_tag="U0308_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HEM2315466.1"
                     /translation="MKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQIL
                     GINDFHGALETASKDASGSPIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDM
                     VGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFDEGLPEYKRILDGVSTNKFGPIV
                     EAYPRVKSDMKIVAANVVNKGTNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLA
                     NHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHVPALSTGNPNTGTKQDVAGEAAN
                     MITKANELDPNNSVDLVLAGHNHQYTNGLVGKTRIVQSYNNGKAFSDVTGELDKTTGD
                     FVTPPDAKITYNTRSVTPNADITAVTEDAKSRIEGVINETIGLANKDVISRDTNPDNK
                     AIDDKESELGNMITDAQRYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAA
                     QAVQPFGNILQVVEMTGADILEALNQQYLSNQTYFLQISGLKYTFTDTDDLDHAYKVA
                     SVTTEDGTPLKADQKYKVVINDFLFGGGDGFSAFKKANLVTAIDPDTETFINYIKDQK
                     AAGKVITAQKEGRKVYKSQAEIDKETEDAAIKAIKDATKINKLAEKDKTLTGTTLPGA
                     TVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTF
                     QATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTT
                     TPNTSTTGTSANTSLPTTGDTAGFATVFGIVLTTTALYVLRKRS"
     gene            42988..43737
                     /locus_tag="U0308_000452"
     CDS             42988..43737
                     /locus_tag="U0308_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEM2315467.1"
                     /translation="MDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLIRLKTA
                     TTILAPIDFFDDIVLLNATREMQDFVAETAIKQINQLGGRFSISINIPAHYVASSTYM
                     TFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSS
                     LAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVE
                     KLREMKVDYFQGYYFSRPLPMEDIKEKYSFV"
     gene            complement(43807..45315)
                     /locus_tag="U0308_000453"
     CDS             complement(43807..45315)
                     /locus_tag="U0308_000453"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEM2315468.1"
                     /translation="MAFYFEEPSRTFSEFLLVPGYSSAECVPTNVSLKTPIVKFKKGE
                     ESAITMNIPLVSAIMQAVSDDNMGIALATEGGVSFIFGSQSIESEAAMVSRVKNHKAG
                     FVISDSNISPDKTLQDILNLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYRVTRMSPD
                     EKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKDYDSN
                     KENKLELLDSSKRYVVGAGINTRDYEERVPALVEAGADILCIDSSEGYSEWQKRTLDY
                     VRGKYGDTVKVGAGNVVDRDGFRYLAEAGADFVKVGVGGGSICITREQKGIGRGQATA
                     LIDVAKARDEYFEETGVYIPICSDGGIVYDYHMTLALAMGADFIMLGRYFSRFDESPT
                     NKVNLNGTYMKEYWGEGANRARNWQRYDLGGDKKLSFEEGVDSYVPYAGSLKDNVAIS
                     LSKVRSTMCNCGALNIPELQQKAKITLVSSTSIVEGGAHDVVVKDASNNLIK"
     gene            45482..45715
                     /locus_tag="U0308_000454"
     CDS             45482..45715
                     /locus_tag="U0308_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(4Fe-4S)-binding protein"
                     /protein_id="HEM2315469.1"
                     /translation="MDEETLLERGYRKYRGAEVDIYFNTNICEHSGNCVKGNAELFNL
                     DRKPWIMPDNVSKEEAKRVIHTCPSGALQYIEK"
     gene            45727..46005
                     /locus_tag="U0308_000455"
     CDS             45727..46005
                     /locus_tag="U0308_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEM2315470.1"
                     /translation="MEYKNGENRIYAVNDEGVEVGEVTFVPTGEDMFIIDHTGVDDAA
                     RGQGIAQELVKRAVEKAKTEGKKIVPLCPFAKAEFAKKPEYQEVQAAK"
     regulatory      46142..46244
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            46331..47905
                     /locus_tag="U0308_000456"
     CDS             46331..47905
                     /locus_tag="U0308_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM2315471.1"
                     /translation="MKKFLLVAVISVFALVLTACGGSGASSDKANGSGKAKDGGSLII
                     GVTGDPEVINPNYASDRVTLTIQQAVYAPLFWEVDGKPALAKSLDISDDNLTYTVKLK
                     DGLTWHDGKPLTADDVVFTVNSILDTKQNSPNRGNFVFDDKPVKVEAVDDTTVKFTLP
                     TVAPAFENTIKTFFPIPKHIFEGVENIEKSDKNKNPIGSGPYKFVEYKTGEYVSLERF
                     NDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKSIQPSDRNKVEKASAVNIITYP
                     ENRLSYATFNENQPALKSKELRQALSYALDREEIIDAAYGSDEYAKPASSFLTENTKY
                     FTDKVETYDQDIAKAKKLVKESGFDTSQKLTVYYLNNSKSQESIALYLQQQYKEIGVT
                     LDLKPTDPNALSNITLDRKNADYSIALNGYIMGNDPDAYKSLYLSDAPYNYSNYHNKD
                     LDALWEKGAVTADDKERQEIYEKIQNTIADDAVIYPISYDNAVLALDSRYGGQKAATP
                     QPVTMFRDLSKLYLTE"
     gene            48007..48957
                     /locus_tag="U0308_000457"
     CDS             48007..48957
                     /locus_tag="U0308_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2315472.1"
                     /translation="MLKTIIKRVLQIIPMLFIISIISFALIKLAPGDPVNSFVTPDMN
                     PDDVERIRQSLGLDQPIYVQYFIWLGNLLQGNLGYSIVNSQPVLQQILERIPATLGLV
                     GTSLVLTLLLSIPLGLVAANYENTWIDKVLNGISYIGISIPIFWFGMILIDVFSIQLG
                     WLPSLGMRTIGVDSFWDMAEHAILPVITLTFQGCAAYYRYVRSNTINQLKEEYVLFGY
                     AKGLSKVQIMGHHVLKNSLLPVITLLGMSLPQVITGAFITESIFSWPGMGSLGINAIF
                     QLDYPVIMAITLFSALLLIIGNLLADLAYMIVDPRIREMG"
     gene            48968..49861
                     /locus_tag="U0308_000458"
     CDS             48968..49861
                     /locus_tag="U0308_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2315473.1"
                     /translation="MRLDFSKKTMQDFERDAEVVHATRERSFWRFMLADRRAVFATSV
                     LILITVACIFAFLSPYDPNALSVQDKLMPPNSSHWFGTDDHGRDYLTRVLYGGRVSLL
                     VGVFAMMIAVVVGTLAGTVSGYFGGFIDNMVMRFLDIFMSIPSFFLLMILNAYLKPGI
                     SNIIIIIGLLSWMEVARIVRAETLTLKEREFILYSKSSGGGFFHIMFKHIIPNAMPSI
                     VVAASLNVATAILTESALSFLGLGVQQPNASWGSMLNNAQGYVGEATYLALFPGLLIL
                     MTILSFNVLGDVLRKGLSRRY"
     gene            50061..50345
                     /locus_tag="U0308_000459"
     CDS             50061..50345
                     /locus_tag="U0308_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3130 domain-containing protein"
                     /protein_id="HEM2315474.1"
                     /translation="MSEIKVKEATLKKHATKLESKGKSTEYLPMKGGNMAYSQANSIN
                     HFRTALFDLVDAVDNFQGVVGTDAKRLKELGVSFTRKDQELERGMGLGGK"
     gene            50346..50714
                     /locus_tag="U0308_000460"
     CDS             50346..50714
                     /locus_tag="U0308_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA double-strand break repair Rad50 ATPase"
                     /protein_id="HEM2315475.1"
                     /translation="MDAKSQQMETQLQLLKKEQSAAEDFLQDLQRQQNEQEWLAEDFA
                     RVHQEERESLELLREVWQGAESRSFGYYLADLQEEEKQKWHKKIQANQEEHQQKITAC
                     QNNIYQLENQQQDLQKELLQ"
     gene            50711..52018
                     /locus_tag="U0308_000461"
                     /pseudo
     CDS             50711..52018
                     /locus_tag="U0308_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246390.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LXG domain-containing protein"
     gene            52028..>52135
                     /locus_tag="U0308_000462"
     CDS             52028..>52135
                     /locus_tag="U0308_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1871 domain-containing protein"
                     /protein_id="HEM2315476.1"
                     /translation="MYEKVEKIINDWDPIELFPLAPKDEYSQEINKIISI"
BASE COUNT        17032 a         8773 c        11104 g        15226 t
ORIGIN      
        1 tttccggagt tacatttaaa aatatttgga ctgataagta tatagcttat cgaaatggta
       61 ttttgattag taatagcgag actcctgatt cattcaaatt aatccgtcaa gctgatggaa
      121 gttatgtacc agaattgagc ggtcgctatg ttagtttctc tgttggacta gtaacagatg
      181 aagcagctgg atcaaaaatc gatttatatt caactcagga aaaattagaa caagtttcgg
      241 aagctatttc tgtaaaagca cttgaagagc cagctatttc agctgagaat attagtgttt
      301 atgataaacg cgtcaaaata gatgttattg gtgaggataa agacaataca acggttaaga
      361 aagataacaa gaatgaactg tttgtaaatg tttataaagc agatggaaca acgctcgtta
      421 aatcaattcg gattgatgga ctaccaacac gcgatgtttc tgttacagag ctttcaccag
      481 attcagatta tgttgttaaa gttgaaggga aatatgattt gttagatggt aaaggcgaaa
      541 aagacaaagt gtatttttca gagacaatta agacagaaaa aagtttaccg agtatgactt
      601 caactgatta ttcatggaat ccagcatatg gtcagcgagc aattaaagga aatatccatt
      661 ttactgatga aagtagcgta ttaacaaata ttgaatatcg tctgtacgat gctgcgacaa
      721 tttcttccaa tttatctaat ttagtagctt tagagcaaga gttaggcaat aaaactcccg
      781 tagctacatt tgataatatg acaaatagtc cagaattctc tatatataac agttctggag
      841 ctcaaaattt tgtttctgga aaaacatatg tgattgcagc atatatgaag acaagtctaa
      901 caagagcacc tatcttccta agtgatgcca aggagcttta tatttcaccg ccaagtggtg
      961 tttctgctcc aatcacgcta gaaaatgttt caacaagaga agcgactctg aaattctctt
     1021 ataatgatcc acaaagttat tttgttggcg gaacaaataa agaattccag tacgtattaa
     1081 aaaacacgac aaatggaaag gaaattaaaa aaggatcgtt tcaaggtggg aatacagcta
     1141 gttggataaa tacttttgag gaattagaac ctgcaacagg atatacgcta acaattagca
     1201 cccaatacga taatctaaat ggtggattag taagagcatg gaatactagc tttaatttca
     1261 ctacagatga tgaatatgta acttcgaact cacttaccat tcagctagat gctggagcaa
     1321 aagtagttaa attacaggct aaagaagtca aaccaggatc tacaacgatt gaaaatatta
     1381 aaatggagtt ctatgagcta atcgactatg gaggcaataa tgaacataat caattagttg
     1441 aaactaaaaa tatcacttta ccaagttctt atccagcaac tattgcagca gattttaatg
     1501 tggcaggtaa gaagaaaaat caaagtttct tgggtaaaat gattgtcacc tatcgaacac
     1561 caacaaatga agttaaaacg tatgaaaaaa catctaattt cattacttta caagaagata
     1621 ttgccgcagg attaaaagca tttaagagtg tgcgagcaac aaataagact ttagaagtaa
     1681 aattagatac tccgcaagtt aatttaaccg ataaaggaga ttacacgtat gaattgaagg
     1741 gcgaaaatgg tgaggtaatt gatacagaaa aagttgcagc ggaagatatt tctaaaactg
     1801 tatcgttatc aatggagcca acaagtgatt atacgttgac tgtcattaat ccagataacc
     1861 agcccgtcgc actttatcaa ggcaataacg aagaaaataa tctgaaagct gaaatcaaca
     1921 aagatagttt tacactgatg agcaataaca cagccgatgc tgaaactaca atgacagtaa
     1981 ctgtagagcc taaagaatta acagcatggc aaacagttca atcctggttt ggtaaagact
     2041 ttacagaaac ttataacatc caaaaagatg agctagatac aggtgtgaaa attgatgcaa
     2101 attatcaaga cactaaagtt actgtcgaag aaacaaaatc aggaaagaat tttggaatta
     2161 ttgaattgga ggagagcaaa tgaaacctac atggaaaata gggataatcg ttgcagctgt
     2221 tccgttaata attattgctg tcgtcttatg ggggtctttt aaggaggcaa ggtataatct
     2281 tgtctctctc cctgatgacg gtgtagtcct aaataatgag caagagacat tgcaatttca
     2341 aaagggcaat acgctttatc gcagttggaa tagtgatcaa ttaattgcga aaaacgataa
     2401 agaagatact cgaaacgaaa ttatggagag taccatcctt tatctaaata aagaagcctt
     2461 aatgtttact aagagtgttc ccgtcattga tacaaatggg gttagtagca aactaaaagg
     2521 aagacaagtc taccaacaga ccaattcttc ctataaatac aaaaactcag aaatcacgga
     2581 aaacagtatt gtaaaactag caaaccgtca atactattta aacgcagatg caacacttta
     2641 tcttggcggc aaagaaatca aaaaagtgtc gaaaccatta cttttgattg ataaaacagg
     2701 aagcgtcact atttatgaaa acaaaaagaa aagccgtttt cttggtcata tgaccttgaa
     2761 agtcaatgat aaaacggttt tagatgctag taacgaaacg tatactgttg gcgaacggaa
     2821 aattgattta gctagctttg gtggaacaga caatgaaaag atagtcgtaa aagaagataa
     2881 gaaaaagacc gcagaatctg cgaaagaaaa agagtctgcg aagaaaacag caagtaactc
     2941 ctctcaatca gaaaatgaaa gtaaccaaac aacaaaaggt acaggcaatc aactcaatgc
     3001 taccaaaaaa tacggaaata atttaaatgt tggaaatgga acttctgatt cggaaccaaa
     3061 cgatggtaag gatactaaaa ataatggttc aggaagtaat gcgaatggtg gtactaatca
     3121 atcagattta aatgaaattg ataattatga agcaatctta cgtaaaatag aggacttaaa
     3181 taaaaaatta gagcgaaaca ttccagtgct aagaatcggc tatatcgcac ctggagtgac
     3241 tagcgtgaaa gtcaactata actatgtaga tccgaataac actttaattg gtgtcactaa
     3301 aattagcgcc gtagatgaaa aaactggaaa aacagttaat acgcaatatg tttcagcagt
     3361 agatacggaa gctacactaa aaggactttc gccaaatggc aagtatcatc ttgaatttac
     3421 ctatcaatat gatttaggaa caaataaagg cattcaggaa gttaaaatgc aaagcgactc
     3481 ttttacaacg caaactgttg ccgcaattta tcaaatgcaa agcgttacaa gcacaacaat
     3541 gaaagtaaat atagcgcttg atgcacaaat tgatgatgtt aaacgagcaa gaattaaagt
     3601 aaccaaagca gatggagatt ttttctatat gaatgttagt gcgaattttt taaatggtaa
     3661 cggagaaacg cttaatgtaa ctgggctaag tcctaaaact gcttaccaat tccaaacgat
     3721 tattgaaatg aaaaacggag aaaccattga attaaacagc tccgagaaat attacactat
     3781 gcaagcaact gtactaagaa atctaagagc tagtcaatct gtgaataaag ttttacaagt
     3841 gcaatatgat tggagttcgg ctgattatac attaaatcaa gcaaccatcg aactggaaga
     3901 cgaggaagat aaaacagaag tagattatca aatcgttaat caagaaaaag gtaatattca
     3961 tcttgttcca gacacgaaaa gggagttaat caacttaaaa gccaaactag tactcaaaac
     4021 gacaaataat aacacaaaag aaagcaaaac atttgagtat cctgttaagc aagaaattga
     4081 atacgacaaa caagctaaac taacaatgga cttaacgccg tttcaaactg aagaaaacag
     4141 tgagttacag tctgaaaaac aagatttagt agcagagaaa gaaacgaacg gaaatgattt
     4201 aacagctaag atggaagatg ttttagcccc tcaaaacgca acttatgata tgtccttttc
     4261 gatgcaacgt aaagctctcg aaacgtatca gttggaattt gaaaggaaga tagctgggat
     4321 agacgatgat aattggaccg tgtggaagag tcaacaagtt acaacggatg aagcagggca
     4381 agtgaaggtt acagaaacca tttcaaaact agctaaagaa agcttcgatt atcgtgtagc
     4441 tgtatacgat gctcaaggtg cattacaact gtacgtttat caaaagtagt aaaaaatgat
     4501 atgcatttta atacaacaaa ctcaaacaga aggtaggaaa caacaatgga tttagtagtt
     4561 gcatgtagcg taattggcgc ggcactggca attgggcttg cgactttagg agcggcaatt
     4621 ggacaaggaa ttgccgtaag tagagcaaca gaaattatcg gaaaaaaccc gaatgcaaag
     4681 aaagaagtta tgggaggtct ctttttggga cttctcatga tagttgcatt aatgctattt
     4741 gcactggcaa tcgcagtcat cttgctttgg gttaatccgt ttatatgatg ggtgagaata
     4801 tggagaaaat gattcaaaca ataattctat atagtgtttt cgcagtagga ttcttatatt
     4861 tactgcattt caccttaaga aaactagaaa atatcttgac tagctttttt tacgaagtga
     4921 gtcaagatca gtcgcttgaa aaggaaagtc ttttacgccg tttaaagcga caaaaagtag
     4981 caacaacaca agaagaacaa aaaaatcgtc aattggctat tgaatcggaa caaaaagaag
     5041 agcttttttt agaagaaatc gatcaattaa tagctcaaaa taaaagctat gaacaacaat
     5101 tgcaggcatg ggaaaatgaa aagccaaagc aaatcgtgga ggtgcctaga tttgaaacaa
     5161 caccacacgc accgtacaaa tcactaagta gttacattaa tgaaattttt caacaagttt
     5221 ttattgagtc ggaagaagat gaagcgcgtc tatttacaga agcaattcgg gaatttgatg
     5281 cattagttag aacagaaaaa atacgttgtg cgctcccata caaagtgatt ttgcagttat
     5341 ttgaaatgta ttcgccagac cagttacatt tatttgctca gtcatttcag agatatagtg
     5401 agcgttcgag taaacttcct gtgaaacaaa tttaccaaag tagttattta tcgccagagc
     5461 aaaaattaaa agtgatgcaa gaagaaggta ctttagatga gttagatgct gaatttatcc
     5521 aatttctttt ttacatgatg acgcattact cttaccgcca aacgcggaac ctgtatcgta
     5581 actttttaga ggtatacaat attcattttt atacaggtct tatttgcatc catgtagcta
     5641 gcaaagattc agctaatcac tttgaaaaac tttggcagcc ggcgcatagg agctataaaa
     5701 tcgagtatca agtacaaaaa gagttaattg gcggagtgat tattcaatat ggttctaaat
     5761 caattgatat gagctaccag gaattaatta aacgatcaac agaaaaaatg gaagcggaag
     5821 tgaaactttg aaaacaattc attttgatat gaacaaatac gaaacccatg tggacttgga
     5881 atatttgaaa gaacatggcc gagtggaaaa aatttctgat ggagttattt tctgctcagg
     5941 cctagaaaat gcagcgctac atcaggctgt tttaattgat gaaaggcacc gaggtgtaat
     6001 tctggagctc aatgaggaat ttgttggaat cggtttgatt gataagacga atgacatttt
     6061 agaaggtatg catgttgggg tctccggcaa atttatcgaa gtagacctat ttgaagaaat
     6121 ggcagggcgt gttattgata ctacaggaaa aatgctttat gaagaaagtg aagaaaagcc
     6181 gacagcaacc tctccacttt tctgtgtaac tccagctatt atgacgattg atagtgtaac
     6241 acgcccgctt aatacggggc ttgcggtgat tgattctatt acgccaattg gtcgaggtca
     6301 gcgtcaatta atccttggca atcgccagtc tgggaaaaca caaattgctg tggatacgat
     6361 aattaaccaa catgatcaaa atgtgcattg catctatgtt gctattggct taaaagcagc
     6421 ttatatcgca gaagttattg aaactcttcg aaatcatgga gcaatggaat attctacggt
     6481 tgttgcaact gcagccagtg attcccttac cgcgcaatat ttaacaccgt atgcgggtat
     6541 ggcagtagcg gaagccttgc gagatcaagg taaagatgta ctcatcattt tagatgattt
     6601 aaccaaacat gcggatgctt atcgagcaat tactttactc tttaaccgcc cgccaggaag
     6661 agaagcttat ccaggagata gtttttatat tcactctagc ctcttagaaa gggccgttca
     6721 aatgaatgaa gaacatggtg gcggttctat tacagcaata ccgatgattg aaactctatc
     6781 agatgatgta acagcttata tccctactaa tgttatctct attacagatg ggcaattatt
     6841 tttaaaatcg gatttattca accgtggtca aaagccagcc gtagatgttg gtgtgtctgt
     6901 ttcaaggatt ggcggcgatg cacaacaccc aattatacgc aaattaagta aaaacttaac
     6961 gttgattctt tcgcagtttg aggaattaaa agaattactc gattttggta atgcacttga
     7021 tgatggcagt atgaaaatgg tatcggatgg ccgattatta acagaattat tcaagcaaaa
     7081 aattctaagc ccgttatcag taacggaatt aatcgttatt ttatatgctt tccaaaatgg
     7141 ctttctaaca aaaatcccgc ctgccaatat tcagaccttc aaagaccttt tgctagaaaa
     7201 aacgcatatg cataaagatt ttgagtcgtt ttcagctcag atagaaacga ttaatgaact
     7261 gaatgaatcg cacatcgaaa tgctagaaga gatcattcgg gaagctggga ggctttttag
     7321 ttgagtagca tagaccaagc ccgaaaaacc attaaagcac taaattcaac ctataaaata
     7381 gtccatgtaa cagaactagc gacactcgga aaactttccg ccttaagaga aaaagcggaa
     7441 gcggctgtta gttattacga aactatttta aaaagtttgc gctgggtgag aaaaactatg
     7501 tacaccagta ataaccaagt aaaagaagaa aaaaatgtta ctgctattgc gataacttct
     7561 gagcgtggtc tttgcggcgc ctataatagt gaggtttttg ttgaaatcga ccagttgatt
     7621 gaatcactcg gcgagcaagt aacgataaat tgggtagttg taggtgaaca aggtcaccgt
     7681 tatttaacaa aactaggtca gaatatcacc tcttatttac agttttctct tgaaaatatt
     7741 gatttagaaa ccactacggc tgttactgct gattttattg acctaattca ttcggaacaa
     7801 atggacgcac tatatgtgat tttcacgaaa tatttgaatg cagttcaatc agaagctatg
     7861 tgtgaaaaaa tttatcctga aattccagaa gactcgaata cggaggaaat tgaagtagat
     7921 tatgtactcg atttcgagac ggatgatgag caggtggagc agttattatt agaaaactat
     7981 ttgtgtggct tgctttatag catgtttcgt tactcggttg ccagtgaata ttgcatgcgc
     8041 cgaatcgcga tgaaacaagc caaagacaat atccagaaac aattggaaga agctattttt
     8101 aatgccagaa agcaagcatt acaacaaaaa actggcgaat tactcgatat cattagtgga
     8161 gcacagacga ttaggaagga cgaagaataa atgaaaaaaa acacaggaac cattattagt
     8221 attagtggtt ttgttttaaa aatcgaattt aatgagagcg aactgcctga aattggcttt
     8281 gcgcttgagt atcatacaca tcaaggaact tatctagctg aagttgttca acatactgga
     8341 attaatacag tgtctgccat cgctattggt gaggtaagtg gcttggctag aggtacggaa
     8401 gtcgttaatt taggacatcc aattgaagta cctgttgggg aaaccgtcca aggaagaatg
     8461 ctaaatgtat atggaaaagc gattgacggc aaaccagaac cagctgcgga agtaaaatgg
     8521 ccaatattcc gtgaccagcc tttacttcga gagctagata cgaataaaga aattctttac
     8581 actggtatta aagttataga tcttatttgt cctattttaa aaggtgggaa aacaggttta
     8641 ttcggtggag cgggtgtagg gaaatctgtc ttaatgcaag aattgattaa taatatcagt
     8701 atgcttggtg gtaactctgt atttactggg gttggagaaa gagttagaga gggaatcggc
     8761 ttgtataaag aattagaagc aagtggtgtg ctccctcaaa caaccgttgt acttggtcaa
     8821 atgaatgaat ctccaggtgt acggatgcgc gtggcattaa caggactaac gattgcagaa
     8881 tatctacgag atgaagagaa aaaagatgtt ttattattta tagataatgt cttccgcttt
     8941 attcaagcgg gttctgaagt ttcttcttta caaggaaaaa ttcctattac tggaggttac
     9001 caatccacac tttccaaaga ggtcggcgat tttcaagacc gcatcgcgtc tactaaaaat
     9061 ggctctatta cctcgattca gtgtgtattt ttaccagcag atgatattga tgatccatct
     9121 gcagttgcga cgtttagcca tctagactca acaattgtat tagagcgttc gattgcggca
     9181 cttgggattt tcccagcggt taatccactt caatcattct caagagcact caatccaacc
     9241 tttgttggcg agcgacacta ccaattagcg gcgcaagtga aatttatctt acagcgttat
     9301 atggaactgc aagaaatcat caacgtactt ggaatggcag aattaagtga tgaagataga
     9361 aaactagttc atcgtgcaag gaaaatccgg aatttccttt cacaaccatt ctatgtttcg
     9421 gaaaaattca ctggaacaga aggcacattt gtagaaattg aagatttgct agggagtatc
     9481 gaacgcattt tgaacggtga ttatgatgaa cgctcagaac gtgatttcct atttatcgga
     9541 tcctacaaag acttgaaata ggaggagaag gaaatgaaac ttaaaatcgt ctcgcctatg
     9601 gggcagtttt ttgaaggaga agtagagggc tttgttatta atacaaaaga aggacaacaa
     9661 accgtgttag aagagcatat tgattgttta agcttttttg actatagtga aatcagtatt
     9721 ttagatgcag ttgcttcgga cccaatcttt gtggcacttg gatatttaca tttagtacaa
     9781 aatgaagcaa atatcatggc acagtttgct tctacggatg ccgagcaagc ggagcggatt
     9841 tttgaaagac taaacaagcg aaaacaaaca gagagtaggc ggtccgatga caagcgaatt
     9901 ttttagtaca cttctgttga ttattggttt attacttggt ttttttctgg cgatattatt
     9961 gattttggtg gggattcggc gctttttatg tagcgctgag gaacccttaa aacgaatcca
    10021 gcgctatcaa ttatggcata atcgctatca gttaaatgca gaggttactt cttttttaat
    10081 tgttattgga gcatcacttt cagtaagcct tattacatta caaattaccg caattccttt
    10141 tcaatatacg gtgctaatat tttggagtag ttggctattc cacttacttt ctttttggaa
    10201 gaagataaga gtacctaaaa aaatgaagaa cgaaatgaag caattagcag gatttctttt
    10261 gatcacagtg ctttattttg ttggtttttt tgcaatgaag tcagtgcatt tttctattat
    10321 acaagtagca gattttccgg gagttattca gttcggaata agaacctatc taactatttg
    10381 tagttttttt gtggcgtgtg gggcattaat tgtttggcag cgcatctatg tgaaactact
    10441 aaaatgacta agaatgtgaa taaagcataa ccaagaaaag tgaggatgtc tacgtggcat
    10501 ccttttttat aaatgaatat aaaaaaagaa tttttctaac atatttctaa catacttgta
    10561 ctatacttta aataagctgt tgattagcca taagaaaatg aacgaaagga agtaaattca
    10621 aatgactttt ttagaattcc atcaattggt caaagaagat ttgttgattt attcatggat
    10681 tataaaaaat tttcacctta cgcgtcaaaa attaatggcg ggtggcgaaa taacgatgaa
    10741 ccgtgaacaa gtaatagtca tggagaaagg tttactagta caagtaaacg aggaaggtaa
    10801 agatgatttg tatcgtgttt ttatcgatca acgaattatt tttacaacaa aaggagacat
    10861 taccttaacg gcgttagaag ataccactta tagcatcatt cgagcagaag aattaattgg
    10921 aaaattagaa gaccaacatt tattaccaac atttttctta gaaatagcgg aagactttga
    10981 gaaaggtcta gactggcaaa gaacgctaat ttctgttgat cctgcagaac gtgcggaaat
    11041 gattttggcg aaaattatcg agcgttatca aataaattca gagaacaaac cagaatttcc
    11101 aagatggtta agaataaatg tactagcaag atttgccaaa tgctcagtgt ctactatgtc
    11161 gtcagttgta aacgaactag tcaatgaagg tgacttaaat ataaaaggaa caccttggtt
    11221 attgactcga ccttatcagg caacttgtgc ttaaaacaga cctgtaaaaa accacgctta
    11281 aatgacattt gcgtggtttt tttacgcgat ctataaaaaa agataaattt attacgtttt
    11341 tttgatatag atacaacaat tttcagatac actaaataat caaaacgtat tttctgtatc
    11401 aataggcgat acactaatga ttatagtatt aatatagatg ttaaaatcat tggtgtataa
    11461 gggttttgag agtaatacta taaattggca cagaacttgc aataaatata gcgggtagca
    11521 aaataaatga attatattag gagggaaaaa gatggtagga attatcctcg caactcacgg
    11581 tgaatttgct gaaggtattt tgcagtccgg aacaatgatt ttcggcgagc aagaaaacgt
    11641 taaagcaatc actttgatgc caagcgaagg tccagaagac atcaaagcta aaatggaagc
    11701 tgcaattgca tcctttgata gccaagatga agttttattc ttagtggatc tttggggagg
    11761 cacaccattc aatcaagcaa acggtcttta tgaactacat aaagataagt gggcaatcgt
    11821 agcaggactt aatttgccaa tgctgattga agctttctca tcacgtttta caatggaaag
    11881 cgcacacgaa atcgcagcaa atattcttgc accagctcaa gaaggtgtcc gcgttaaacc
    11941 agaagaacta cagccgcaag taacagctac tgaacagcca caagcagaaa tcgctgcagt
    12001 tggtgatggc aaaatcgaat tcgttttaac tcgtgttgat tcacgtctct tgcatggtca
    12061 agtagccact gcatggacaa aagcaacaca cccaacaaga attatcgtcg tttcagatgc
    12121 agttgcaaaa gacgaccttc gtaaaaaatt aatcgaacaa gcagcaccac caggagtaaa
    12181 agctaacgtt atcccagtcc aaaaaatgat tgagatttca aaagatccgc gtttcggcaa
    12241 tacaaaagca cttttattat tcgaaaatcc tcaagatgtt ttacgcgcaa ttgaaggtgg
    12301 cgtagaaatc gaacaagtaa acgttggttc catggctcac tctgtaggta aagttgttgt
    12361 tagcaaagta ctttccatgg ggaaagatga tgttgaaacc tttgagaaac taaaagaaaa
    12421 aggcgttaaa ttcgatgtgc gtaaagtccc taatgactca agcgcaaaca tggaagacat
    12481 catcaaaaaa gcaaaacacg aactaaagac acaataaaaa attaaaatag gaggtttatt
    12541 atgtctgtca tatcaataat tttagtagta cttattgcat ttttagcagg tattgaagga
    12601 attctagatg aatttcagtt ccatcagcca ttaatcgcat gtacattaat tggtctcgta
    12661 acaggtaact taacagcatg tatcatcctt ggcggaactc tacaaatgat cgcacttgga
    12721 tgggcaaaca tcggagcagc cgtagcacca gatgccgcgc ttgcctcagt agcttcagca
    12781 attatattag tattaggtgg acaaggggta gcaggtattc catctgcaat cgcgattgca
    12841 attccactag cagtagcagg tcttttctta acaatgatcg ttcgtacatt ggcagttcca
    12901 attgttcact tgatggacag agccgctgaa aaagggaata tacgcagcgt agagtggtta
    12961 catatttcag caatttgtat gcaaggtatt cgtatcgcga ttcctgcagc agcactttta
    13021 ttcattccag cagacagcgt tcaatctttc ttagaagcaa tgccagcttg gttaacagat
    13081 ggtatggcta tcggtggagg aatggtagtt gccgttggtt atgcactagt tatcaacatg
    13141 atggctacta aagaagtatg gccgttcttc gtaatcggtt tcgtagtagc tgcaatttct
    13201 caacttacac ttatcgcaat tggtgctcta ggtgttgcac ttgctcttat ttaccttaac
    13261 ctatctaaaa tgggtggcgg taactcaaac ggcggtggag gcggaaactc tcgcgatcca
    13321 ctgggcgata tattaaacga ctattaataa aaaaaggagg agaatagaat ggcagaaaaa
    13381 atcgaattat caaagagaga ccgtctacgc gtagcatggc gctctacgtt cattcaaggt
    13441 tcatggaact acgaacgtat gcaaaatggt ggctgggcat tctctatgat tcccgctatt
    13501 aaaaaattat ataaaactaa agaagatcgt tcgcaagctc taaaacgtca cttagaattc
    13561 tttaatacac atccatatat tgcatctcca attctagggg taacacttgc tcttgaagaa
    13621 gaacgtgcca atggagcaga agttgatgat gtagcaattc aaggggttaa agttggtatg
    13681 atgggacctc tagctggtgt tggtgatcca gtattctggt ttacaattcg tccaatgtta
    13741 ggagcattag gtgcttctct tgccttgagt ggaaacattc ttggaccaat cttattcttc
    13801 gttgcttgga acgtaatccg ttggggcttc atgtggtata cacaagaatt cggctacaaa
    13861 gctggttcta aaattactga tgacctttct ggtggattac tacaagacat tacaaaaggt
    13921 gcttcgatac tcgggatgtt cgtcctcgcc gccttggtgc agagatgggt aaatatccag
    13981 tttgcgccaa ttatctcgaa agttaaactt gatgaaggtg cgtatattga ttggagtcat
    14041 cttccacaag gcgctcaagg tatcaaaact gctttagaac aacaacaagc aggtttagct
    14101 ctttctgaaa ttaaagtaac aaccttgcaa aataacttgg ataacttaat cccaggactt
    14161 gcagcagtag ctcttacatt cctatgtatg tggttactta agaaaaaaat cagcccaatt
    14221 atcatcattc taggtctatt cgtagttggt atagttggtc acttaatcgg gcttctgtaa
    14281 aaataagctg atcgaaaaga ggctggtgca atattcaccg agcctctttt cgtttagata
    14341 tatgacacag ataaacgaat acggtataat aaacaaaaca agcgaaaaga aatggagcga
    14401 atacagttgg ttcaatcgat taatacaaag gtagacttaa caatagatgc caccgcgtat
    14461 actggactta cagattacgg gaaaattatg attggcgaca aaggttttga attttttaac
    14521 tcacgtgatg tgcgtaaatt cgtccaaatc ccttgggaag aagtagatca agttatcgta
    14581 tccgttatgc taaaaggtaa gtggatccct cgctacgcca ttaaaacaaa gcgcaacggc
    14641 acatacacat ttgcttctaa acgacctaaa gaagttttac gtaaaatacg agtttatgtc
    14701 gacccagcca atatggtgag ctcgctcagt ttctttgatg ttatgaagcg ctcgtttcgg
    14761 tcgatattta gcaagaaaaa aaacaaaaat aaataagccg atttataccg aaaagcttca
    14821 atggatttat gtctgttgat gctttttttc gtacataata attgaacaaa ccacgtactt
    14881 tgttataatc taaagtaaac aaaggaggaa caccaatatg aaaaaaccaa gaatctacac
    14941 gatgtcattc gctagtgtat accctcttta catacaaaaa gcggagaaaa aagaccgcac
    15001 aaaagaagaa gtggatgaaa ttattttttg gctaaccggc tatgatcaag attctttgca
    15061 acaagcaatc gaccaagcaa ttgatttcga gaccttcttt gccgaagcac caaaaatgaa
    15121 tccgaatgct tccttaatca ccggagttat ttgcggctac cgagtagaag aaattgaaga
    15181 taaactaatg caacaaattc gttatttgga taaattggtg gatgaactcg caaaagggaa
    15241 aaaaatggag aagattttaa ggaaataaga aaaaagcagc cggatttgga tggctgcttt
    15301 tttattgctt agcttctgga gactttcttt tttaaatttg ctagagagtt cgctactttt
    15361 aaagtagttt ttacagattt tcggtttaat gttccttgat aatgtctgat tttattagtt
    15421 agttcgtgat ttttattaat cgtcaactgt aatttttgtt tagtatctgt cagttgtttt
    15481 tctaattgct gatttttttc ttgtgtttca gtaatttttt gttggtattt tttgttttgt
    15541 tcagaagttg tttttttcag ttgggtaagt tgattattta cgagattgac gcggtatctt
    15601 gtgctaaaat catgtctttc ttttaataaa ttggtggaga tttttactcg gtttagcatt
    15661 tcttgagggt ttaatatgga aatggggtct ggacttgttg ggaaagtaat ggagtttata
    15721 agttcatcca tgggagctga ttttctgttt ttatcgtatt tatagatatg attgagacca
    15781 ttagtatcta agaaatcaat ataattatca aaatttcttg cttggacttt ttcggctgat
    15841 ttcaggtcca ctttagttag taattcttgg aggttgttgg ttttttctaa ttcatcgatg
    15901 gttacgtgag gaagcgcatg gtaggaagct agttcacgca ttctggcatc ttgtacgaaa
    15961 gaaatattag gtgttccgac tattgttgga atgacgtttc catgtaggcg agagccaatg
    16021 ctaaaatcaa ctttcttcac aaaatcgaac caactaggca tgctagtgaa atattttact
    16081 cgaccttctt gataatactt atgttggata tttgttgggt agccattgat atcactagag
    16141 atatctggac cgccggcata cattaaatgg aattcgtcta ggtgttgagg gataaagtga
    16201 tagtctttat atgtagtaat catgttgtta aggaaattga tagctatttc tgaagaagtt
    16261 ggggatgcat taatagcgat ggtggattga tctgttaagt gaaaatctct tatttttatt
    16321 tctcgtccga atgtataaag ggacggacaa ccaattactc ggaagtcaag ttctgcgtta
    16381 aatcctagtt tttttaaata atctgcagta atttgtcctc gaaccccaat ttgagctgat
    16441 ttttctagga ctgctttaac aaagttagta acatcttcat caaaagaaaa accttcgtct
    16501 agttgtggtt cgtaattcgc tcttaacccg acgcctgtta cgatgactgg gatttttaat
    16561 ttgcgaatga gttgggtgta attgcggagt actggcctaa agtcgtctcg aaatgcgtca
    16621 gctaaaggca taacatagag gtcgtaattt tcattgattt tttctgcgag attggggtta
    16681 gatgaaagac cgtcagcatg tatttctaca tcatcattcc acaaagctcg ataaatgcta
    16741 tattgatacg caagattacc attgttaaac ccggttcgat cctttaaata gatgtcttcc
    16801 ggcgtgtaga cattggtcgg tcgcataccc gatctaatga gtattcgctt cactaaaaaa
    16861 ccacatcctt aagtaagtta atatttaaag tatatcaaaa tattaacctg gttaacaatt
    16921 ttaaagatga aattcatggt ttatttgtga ttatgtttac atgcatcaaa gaagtagccg
    16981 atttcttcca ctaatgcttc attcaccgaa taaatatgcg tggttccttc ctttcttaaa
    17041 ttaataagtt ttgcttcttt aagcagttta atgtggtgag acatggtaga tttggagata
    17101 ttgtaagttg tgccagagaa gcgtttttct ttgcttttca gtaaacatag gaaaatatca
    17161 agacggattg gatcgcttaa tgcttggaaa attaataata aatctgattt tgagagctca
    17221 tttaactttt tcatataaat atcatatcat aacttacatt ttaattgcgc ggaacttgct
    17281 gctatgttat attatgatag ttcgaaatta atcgaactat caaatctgaa agaagttgtt
    17341 gggaaatgtt gcatattgaa gcgcaaatta cggtcaaaaa agaacaaacc gaagcttttt
    17401 tgcaggcggc taaggaagtt attgctgcat caagagcaga agctgggaat catggttatg
    17461 aattagtaca atcaacagaa aacgaaacag ttttttatat gttagaaaaa tgggcggata
    17521 tggaagccat tcaacaacac aacgacagcg agcatttcaa aaaattccag aaattggctg
    17581 ctgattttgt tgctaaagaa cttgaaattt cagtattaac gccacttgcg cgataaggag
    17641 gaccataata tgacttatgt aaataatgat tttgaagact taatgaaaaa ccgccgctcg
    17701 attcgagaat acgatgaaac ggtgaaaatt agccaagaag aaatgaaagc tattctagag
    17761 gacgcggtaa cggctccttc ctctgtaaac atgcaaccat ggcgttttgt ggtcgtggaa
    17821 agtgatgcgg gtaaagaaaa attaagctcg ttagttcgct ttaatacacg tcaaaatgaa
    17881 tcttcttccg caatgatcct agtttttggc gacttagaga attttgaaaa cggtgaaaaa
    17941 atttacggag aatcagttga acgcggcttg atgccggcag aagtgaaaga acaacaaatg
    18001 gctaaattaa gccagtactt tgcatccatt ccgcgcacag aagcagaacg tgtagttctt
    18061 attgacggcg gaattgtagc gatgcaatta atgttagttg ctcgtgcgca tggttatgat
    18121 acaaatccaa ttggtggttt tgaacgtaag gaagttgctg aggccttcaa tatggatcca
    18181 gagcgttatg taccggttat gattgtttct atcggtaaag ctaaaaattc tggctaccag
    18241 tcttatcgat taccaattac ggatgttacg acttttgctt aaaagagggc aaggaaatag
    18301 ctgatatttc cttgttcttt ttttgttcct ttcttgatat aattaaaata acatacagcc
    18361 aaggaggaga agcaactatg actatcaaaa taactcgtaa aactggaatt ggcagcggta
    18421 ttactccggt gaaaattaga atcgaaaatg aagaaattgt aaaactcgac aatcatcagt
    18481 ctcatttttt tatgcctaag atggagaaaa caaaggtttg cgtgactaat tggttttatg
    18541 ggagtcagga agcggttttg gaaaataata atgatgttat tgtgcggatt aaccgtaaag
    18601 cactaatatt aaattattca atgtttccat ttcttttttt cggacttttg gccactagtt
    18661 gggagtctac agtcattgcg ttaatacttt gtttggcatc ctttttttat tcgcgaaagc
    18721 attggtttga atttgtgaaa attaaataat aattcatgga tagcgtggga tatgttctca
    18781 tgcttttttt atctgtgtaa gtttttattc catctgtgta tcttaggaag gggtcttaaa
    18841 ccgcagaatg acagcgcttt cttttggcat gataattgca tgatatacag atgctcggaa
    18901 tgaatcttta attggaggga ggaaattaga gagaagaaca ttcgggcaac cacacaaaaa
    18961 ggggtacaga gagacaaact tagaactacc gaaatgaggt ttataaatca aaaatcgggg
    19021 tgaagagatg aataagaaga tgaaaaagct ttttagtatt acttctgttg tgttgttagt
    19081 tttatcgtta gtggttgtat caattggtgc agagccaaaa cgggcgaaag cggctgaaaa
    19141 tgtaccacag tatcggaatg ttatgtatta cggtgattgg tcgatttggg gaggagaagg
    19201 gaacttttat ccgaaagata ttccagctga tcaattaaca catttgaatt ttgcttttct
    19261 ggattttaat agtaatgggg atttagtttt tactgataaa gatgctgctg ttggggcgcc
    19321 tgttggacaa gagggagttc aatggggcgg agcaaatgca ggcgttttga atgcgattca
    19381 agatttgcgc gctcaaaatc cgaatttgaa aataggggtt tcagttggag gctggtctaa
    19441 gtcgggagat ttctcgacag ttgcagcgga tccaacaaaa cgggctaact ttgtgaaaaa
    19501 cgtgatgaag tttgtgaaat atactaatat ggattttgtt gatttggact gggaatatcc
    19561 tgcttcggta cgggacgctg accttgttga taataaaaac gatgaaggca caccaaatgc
    19621 aaaacctgcg gataagcaaa actttattac acttttacaa gatttaagaa cggctttgga
    19681 taaacaaggc gtggatatta acaagaaata cgaattatcg gttgctttac cagctgcaaa
    19741 atctacttta gaaaatggga ttgatgtagc gaatttattt aaagtagtcg attttgcgaa
    19801 tgtgatgacg tatgacttaa atggtgcttg gacaccgaat agtgcgcatc atacagcgct
    19861 ttacggcaat ccgaaagatc cgaattatga tagtggtttt tctgtcgacc aaaccgttaa
    19921 atacttaaaa gaaaagggag cagtttcgaa taaaattgtt gttggggcag cattttacac
    19981 tcgaggctgg aataaagtag ctgctggaac ggatacggca ttgccagggc ttttccaagc
    20041 tgctgaaaaa acgaataaag atgcggatgg ctcgcttact tacggggcaa acaacgaaaa
    20101 cccaattaaa acaggcgatg ggggccgtgc tggcggagtt tgggcgtata gaagtattga
    20161 tgcgctaaaa gctaaaacgc caacattgaa agaatattgg gatgatactg ccaaggcgcc
    20221 gtatctttat agtaaggaaa ctggggagtt ttacacatat gacaatacgc gttcaattgg
    20281 ctataaggca cagtatgtaa aagataataa tcttggtggg atgatttctt ggatgcagtc
    20341 gcaggataaa acaacgactt caactaagcg cgatgaactc acaaaggcga ttaaatcagg
    20401 attattcggc acaaacgcta tcccgcaaaa cgcgattact tatgcgaatt taaatgtggt
    20461 agcgacagtg aaaccttata gcgaaaatgg ggtcgggtac gaaattacaa ttacaaacaa
    20521 tgaaaaagcg gacgaaacca atgaagtttt gaaatcaact gagctatcgt ttgaaacagt
    20581 gaaattacct aagttttata ttccagtaaa agcgggcgaa acgttaactg ctggcgatta
    20641 taaagcgggt acagttacta cttcaggtgg caatacagta gttgatttag cttctgtata
    20701 cgacgcgcaa caaattccgc aaggcgcatc ttatacgttc cgtttaaaat cgagtgcatc
    20761 tagtgtggat gtagctaaca tttctaaaat tgatttaaca caacggatgg taaaatcgag
    20821 tgtcgaattt ggtaaacaaa cgatttttgg cgggggaact gttgtacctg atccaagcga
    20881 tacagaagct ccaacagtac caaaagcact cacatcttct aatgtaaccg ataaatctgc
    20941 tactctaacg tggacagctt caacggacaa taaagcagtg gctggatata aagtgtaccg
    21001 aaatgggacc gaagtgggct ctgtttcagg aactactttt acagatagtg gcttaactgc
    21061 aaaaacagcg tattcttata cagtaaaagc atatgatgcg gctgggaatt tctcagcagc
    21121 aagctcggcc ttaactgtga caacgcttga tgcggcaaca ccaccagcaa ctccagcatg
    21181 ggacgctgcc aaaacgtaca ataagggaga tagggtttct tacaaaggga aaacatatga
    21241 agcacagtgg tggactcagg gaaatgagcc aggagctgaa cagtggggtc cttggttgtt
    21301 aataaattaa tagacaaaaa cagagattct tttcggagaa tctctgtttt tatttgaaaa
    21361 agtgaccaaa cgtattacaa tgaataaaag cgacaagaga gggtgcagaa ggatgtattt
    21421 tgtatacgat attggtggaa cttttgttaa atttgcgttg atggaaaata acggtacggt
    21481 gaaaatgaaa gataaattcc ctacaactgc caaaagtgca gaagaacttg tagctcaaat
    21541 ggtcgaaaag tggcgcccct atagtacaga agtgaagggc atagctgtga gttgtccggg
    21601 agtggtagat acggaaaaag gcgtgattta ccaaggtggc tcgctattat ttatgcatga
    21661 gaaaaatttg gctgaaatgc tagcgcgtga atgtcatgtt cccgttgtct tgcaaaatga
    21721 tgcgaagagt gcggctttag cggaactttg gttaggtgtg gcaaaaaatg tacatagcgc
    21781 ggcgatttta acgcttggaa gtggcgttgg tggcggaatt attatggatg gtaaattaca
    21841 atctggctat catttgatgg cgggagaagt tagttttatg gagacttctt ttgatacgaa
    21901 gaaattgcga ggtacattct ttggaagaac tggatcagcg gtggagttaa ttaagcgcat
    21961 tgcatcaaag aagaatttac ccaataaaaa agatggtgag caggttttcg aattaattaa
    22021 ccaaggcgat gaagaagcga atgctatttt tgatgtgtat atttatgaat taacatctca
    22081 aattttaaat atccagtatt tgattgatcc ggaaattatt gcaattggtg gtggcattag
    22141 cgctcaacca gttgttgttg atagactaaa cgaagctgtc gcagaaataa aagatgctaa
    22201 tccttatcat gccgcacaac cgaaaatcgt cacttgtcat ttccaaaatg atgcgaattt
    22261 gtacggagca ttgtataatt tctttttaca aatggatgtg caaaataaaa ggtaactaga
    22321 atctctagtt accttttttc tataaagctt gcaacatatc aaactgtgat tgatataaat
    22381 tatagtagta gccgtgctgt gccatcagtt cttcgtgact gccagcttct tgaatgcgac
    22441 cattatcaat gtagaagatg cgcgaactgt ttttgattgt cgaaagtctg tgcgcgataa
    22501 tgaaggatgt tcggccttcc agcagtcgct caagcccttc ttggagtagg atttctgttt
    22561 gtgtatcaat acttgaagtt gcttcatcaa ggatgaggat tttcggatcg gctaaaagag
    22621 cacgggcaaa ggaaatcagt tgtcgctgac cggccgaaag agtgctacct cgttctttta
    22681 cttcggtata gtagccatct tttaatccgg aaatgaaatc atgagcacga acgactttgg
    22741 cagccgcgat aatttcttct tcggttgcat ctagcttccc gtagcgaata ttttcaataa
    22801 tcgttcctga aaaaataaag gtatcttgga gcatcacgcc catttgggac ctgagtgatc
    22861 taagcgtgac ttcttcgaca ttttccccat caactaaaat ttctccagaa tttatattat
    22921 aaaaacggct gagcaagttt atgatggtcg tttttccagc gccagtcgga ccaacgagcg
    22981 caattgattc acccgcatcc acatgaaaat taattccttt taaaatgtcc acaccttcct
    23041 cataacggaa ataaacatct ttaaagtcaa catttccaac gattggtggc atttttttcg
    23101 catttgggac atctttaata tcgggctcaa cgtccatcgt ttcgaaaatt cgctccaaat
    23161 aagtcgttgc ggtaataagc gaattataga agtttccaat attaataaca ggattccaaa
    23221 aattcccaac ataaccgatg aaagcaatca gtgtcccggt agaaacgtcc acaccgtaac
    23281 ctttgattcc aacgaagtaa attaaacaag tcgtcattac ggcgatattt tgaaccccag
    23341 gccaaagcaa gaattgaatt ttcaccgctt tcatccaaga acggcggtac tcattactta
    23401 cctcggtgaa aatctcaaaa ttctcttctt ctcgcgaaaa gctttgcgtt acttttatcc
    23461 cagcgatgct ctcatggata taggcgttca tgttggattg tttattgctt agaacttgat
    23521 aagcttttcg ttgcgcggtt ttaatgacca taacaatcac gaaaagaacc gggataagcg
    23581 ctaaactata caacgttaac actggatcaa tcatcaacat aaaaccaagc gttacaatga
    23641 cacttaaaat atcggaaatc agatttatca gcccattgga caataaatca ctgagcatat
    23701 tgatgtaatt aacaacacga atcaaaattt taccatgcgg gcgactgtca aaataagaga
    23761 aaggcagctt ttgcaaatga ccgaaaatcg ctgtccgcat atcttttaaa atgtcttgcc
    23821 caataagcgt aatcgaccta atgcggtatc gcatacaaag tccggttaca acgacagaaa
    23881 ctatgaaaat aatcgcaatc cagaatagtt gtgtcatgtt tttgtttgga atcgtatcat
    23941 ctatgactat tttggttaaa tacgggccaa tcattgttgc tacatttgct aataagatga
    24001 caaagagcgt aatataaatg gatttttgat agggttttac gtaaacgaga atacgtttta
    24061 aatgtgcggc gctgaaggct gtttccagtt cttcgtcaat atcaaattta tttctagcca
    24121 ttcacattcg cctccgttcc aagttgttta ttgtaaatat caaaataata acctttttct
    24181 gctagcaaac tagagtgtgt gccgcgttcg atgatttcgc catgatttaa aattaaaatt
    24241 tcatcggctt cttttacaga agaaatccgg tgcgcaatga taaatgtggt cgtattttcc
    24301 gtgattttct ttaattcacc ttggattttc acttcggttt ccatatcgac agcggaagtg
    24361 gtatcatcca aaatcaaaat ggatggattt tttaaaagag cacgagctaa agatatccgc
    24421 tgcttttgtc cgccagaaag tccgacaccg cgttcaccaa caatcgtgtc ataactttca
    24481 ggcatggttt cgatgaagtg gtccgcgtct gcaattcgcg ccatacgccg gacatcttcc
    24541 attgttgcat ccggagcgcc aaatgcaata tttccttcaa tcgtatcaga aaataggaaa
    24601 atatcttgca tcaccgtggc gatatggttt ctaagttccc gcacatgcca ttttcgcgca
    24661 tcgacaccat caattaaaat ttcaccggaa gtcggatcgt aaaatcggca aattaagttg
    24721 acgagtgttg attttccagc gccagtttca cccagaatag caatcgtttg gcctggagaa
    24781 gcttttagtg aaatattttt gagtacgtcc gtgtttgggt cgtcctcgaa atgaaaactg
    24841 acatttttaa actcgacgtg accttgaagt gatggcgcag gtttttcagc gtggatgggg
    24901 attttagcgt cagttgccat catgtcttga attttaaacg aagaagcgat aaagcgttga
    24961 acgtcgttaa tcagccagcc actcatgcgc atcgggccgt ttagcatcca taggaatcca
    25021 ttgaaggcaa ctaaatctcc cagcgtcatt tggcctttaa ttactaaata gccaccgaaa
    25081 ataagcgtga tgacaacgag catgcccgcg agcgaatcaa gcactggcaa ataggttctg
    25141 gaaacatcgg cagaatctag attacgtttt ttgaaatcct cattgtgttc atggaatttc
    25201 ttcatttcaa aatcttctcg cgcaaaggct tttacgacgc gattcccgct aatattctct
    25261 tccaccatcg aattgagccg tgaaaagctc tcccgaattt cataaaaaac tggttgggct
    25321 ttactcgaca ttttcatcgt taaaatagca ataagcggtg ttacgataac aagcgcaagc
    25381 gttaatttcc agtcaatcgc ggccattatg ataattgcaa aactaaataa aaatacattt
    25441 tccaaaatgt tgtaagatac ccacgaaaca aaatgacgaa tcgcatccgt atcaccagtc
    25501 atccgcgcca taatatcccc aacgcgcgta ttattgaaaa aatcaaaatc gagtgattgc
    25561 aactttttat ataaatcttc tcgaattcgg aaaagggaat tttgcccaat tcgttcgcac
    25621 ataatctgat aggtataacg gcaaatagtt cgaataattg tcgaaataat catgattaaa
    25681 agtagcggga taagcaaatt cgttttattt tgatagacaa catcgtcaat cactttcccg
    25741 ccaagtaacg gataaataat actaatacct gaagcgataa aaattaaaat aaatacacca
    25801 atcataagta gacgatattt tcggacatat tgccaaatcc atttcatact ctccattttt
    25861 tcacatcctt taatattcat atatccattt agtttacact cctaatttcg aaaaagaatg
    25921 gtttatattc gctgtaagca tggacaatgt tatataatta aaagataaat gtaagcgtta
    25981 taacgaggag gtgaagtgat gctgaaaata aatacgacca catttaatcc gcaaattttg
    26041 tatatcgcga attgttatac gaatgaggtg cgcgtaggtg aaaatcacca tcatgatttt
    26101 ttggagatct cgattatttg tgagggaaac gttatttatg atattgaagg cgagcgagtc
    26161 aagctaggaa aaggcgatat gctgattttt aatcctggtg tgaatcatta cgatataacc
    26221 gaaccaggta tgacgaatgc gcaactccat ataggttttc ggaactttgc actggaagga
    26281 tacacgcgaa atacgttccc gtttaaaaag gcctttttac gaaaaaaaga agaagaatct
    26341 gccattttat ctatttctaa acaaattata gaagaaaaag acgcagaaaa accaggatat
    26401 gacttgattt taaaggcttt cgtcatgcaa ttaattatcc atgttttacg cgaagccacc
    26461 ccagaacaac ttgaaaataa cggcgtcaaa ttatctaccg acgagcagca aaaacagata
    26521 cttgtaaacg aaattattca ttatatggaa aaacaccata cagaagacgt ctcgctctca
    26581 acgctttcgc aaacgatgta cattagcccc gcctatatct ccaaagtatt taaagaagaa
    26641 accggggaat caccaattaa ctacttaatc aaaattcgtc ttactcgtgc agaagaatta
    26701 ctcaagaata aagacgttac cgtaaaacag gccgcaaata tggtcggata taatgatgct
    26761 tattatttta gcaagctttt caagaaatat tacgggtttc caccatcaga aaactggcgc
    26821 aaatcgagtt agaattccaa aataagacag agagaaggaa gactggatgg aatataaaaa
    26881 agctttagcg tttataaaat caaatagcat tctagaacaa gaagaaggaa cagaagttat
    26941 ttttaaacag gcacaagaaa cagttcgagg gaatttggat ccttttttat taaaagacct
    27001 gaaacaacat cttggcggta cgaatgatgc gataaaagaa gcgccgcaag aaatccaaat
    27061 gccagatttt tctaatttgg aaatagcaac ggcagctgca ctacaaatgc gagcaacgat
    27121 gggaagtccg aatattgatt tatcaaacgg tgtaactacg gaatatcggg ttgttgaagg
    27181 ggactatggc gatattccgg tacgaattta tcgtcacgaa gaagcgacca aaccagttcc
    27241 cgcattcatt ttttatcatg gtggtggctt tgttggtgga acgccggctg ttgtggagaa
    27301 cttttgtaaa ggtattgcgg aaaagttacc ggcagttgtt attaatgtgg actatcattt
    27361 agctcccgaa ttcccggcac cagcagctcc aaaagattgt tacagggcgc ttgaatgggt
    27421 agtggaacaa agcgacgaac tcggtatcga cgcttcgaaa ataggtgttt ctggagatag
    27481 cgcgggtgga actttagcag cagcggtgag ctatatggat tatgaagcag agacgaatta
    27541 tgtaggattt caagctttac tttacccagc gctaacgtta gtagatgaag ataatgataa
    27601 gtaccagtgg gatatttcca agtttggggc atcagaagag acacttccgc tcgttgcgcc
    27661 aggtatcatt ggaatgaaca gctctggcga attactgcgg acggcctatg ttagagacga
    27721 aaatcccgca tcgccaattt attctccact atcggctgta gataaaagta tttatccgcc
    27781 tacacttata gccagtgcgg agtttgatgc gttacgagct tttgcagata tttttgctaa
    27841 agaactgcga gcaagtggtg tgcaaacaaa agtaatcgtt taccaaggaa tgtgtcatgc
    27901 tttcattgat aaatacggga ttttccctca agcggaagac gtggcagatg aaattgttca
    27961 aatgatgaaa gaaatatttt aaagaataat ttgcaggcat tttccggaat gcctgtttgt
    28021 ttttggacta aattttgcga ttagtactaa aaatgtatta gaatagagaa gagaaatgag
    28081 aaaggatgat gggactcatg aaatttcagc tttttattca accaaaatta gatgttcttc
    28141 agggaaatat tgtcgaatat gaaatacttt tacgtgatga tagtgcagtt cctagatttc
    28201 ctctatcaga attagaagct gtactcgcgg acgaagaact gtacttagct ttttccgagt
    28261 ggtttagcga ggccttctta gacgttttaa agaaatatcc aaatgatcga tttgccataa
    28321 atattgcgcc acaacagctt ttttacatag aaacactcca ctggctagac aaattaaaaa
    28381 gcgagagcca tcgtataact gtagaaatga ccgaagatat tttcgatgtc cccggtcata
    28441 aacgccacct taatgcgaac gataaaaacg catttattct aaataaaatt aaagtgattc
    28501 acggtctcgg ctaccatatc gccatagacg atgttagttg cggattgaac agcctagagc
    28561 gagtgatgag ctacctacct tacataatag agattaaatt ctccctcatt catttcaaaa
    28621 atataccatt agaagatttg ctactattta ttaaagcttg ggcaaatttt gctcagaaaa
    28681 ataagctcga ttttgttgtt gagggaattg aaacgaaaga aaccatgact ctactagaaa
    28741 gtcatggcgt ctcgattttt caaggttatc tcgttaataa gccgtttccg gtttgaaaac
    28801 tatctatttg attgagtaga ttctcgtgcg agctaatggt gatgggcttt ttggaaagca
    28861 gtagtccgct ttcccgtagc tcttctaaca cttcagttac tctagctcga ctcgaacgac
    28921 aataatcagc taagaaagtt tgcgtgacat agactggaag ctcaattgcc ccctctgttt
    28981 gatgcaaatg aagtaactca ataatttcca ccaaaatacg cgttactttg actatgggtg
    29041 cttgattaat attcttgtaa ttttttgatg taaataaata tctgacaata acttcatcaa
    29101 gtataagatg gaaaaattgt gggtttgcat ataaataatt gagaagaaac tcgcggtcaa
    29161 taaatagaac ggtaccattt tctaatgcgc gaacacgata ttcagtaagt tcaggtgctg
    29221 ttttagtttc gagtaaactt tccattccaa aaagcgagtg ttgaccaatc aacgcattta
    29281 tcatccagcg accttcattt gtaggacctt ctaaaacagc cgttccctct aaaatagcac
    29341 ctatttgcgg cgtcttttct tcgtaatctc tatatgaatg aataatttcg ccttttttaa
    29401 aagaaatctt atttgaataa tcactagaaa aaatatctga aaaatctatc gtgtgaaaca
    29461 ttatcaaaac tcctatacta aggtaaaatt ggtatttacc atattacttt actgctattt
    29521 gtgttaaaaa gataccgaat aaaaatcgtg ttcacaattt agacatgaaa aagtcactct
    29581 ttagcaacaa atttagtggt tttatcaata aaaacttact ttttcttccc tggagagaaa
    29641 ttcaaccaaa aaaagaccct ccatagatag gagagtcttt caaaacttct tgtaaacatc
    29701 aatggaattg ccaaaattaa tgaaatatcc accataatca tacatcggac catatttttc
    29761 tgcgtaatga gtaactgtat ggcgcaaaaa ttcttctgtt acctctaaaa actccgctac
    29821 ttcaaaatat tctcgtaagc ctagataaaa acaagcaatg atgtcatcaa gcggtattag
    29881 ttcctcataa cctttacgac gagcaaaaat ttcttgtttt ttatccataa ttgtttcctg
    29941 tttagtgatg ttacctacag tgtatttgta atgcatcaat tcttctacta aaacacagcc
    30001 tttttcaatg gaagattgat ccttactaat aaaaatcgtc ccatttaaat aaagacctgg
    30061 caatttgtaa ggcatttttt cttctctgat tgttacctca tcttggtatt tatttaccaa
    30121 tttttcgtac aataaaatca catcccgcga tggagttttt tcttcatctc tatataagct
    30181 aaaatatccc gcatttcttc ctcggttacg tcatcatcaa tatgggctgc aattgttacc
    30241 aagcgttcat caacaggtgg taaatttctt tcaggaaaaa agtcatctaa tcgtttgttg
    30301 aaaatttttg caagttcaaa taaaacgtct tgatttgctt ttcgatcacc attttcataa
    30361 cggctaatag tttggcgagt tgtatgaagc ttttctgcta atgcttcttg atttaagcct
    30421 cgttcctcgc gatattgttt tattttattt cctacaaatt tatttaactc cataataatt
    30481 gccctccaca tgtttatggc ttcagtatag cacttttagc accaaaacgg aactttttcg
    30541 aacatatttg tcggataaag tttaccagta accaaaatgg tgctataata tttatagagc
    30601 tagaaaataa atgcggctga ttttgcgcca atagcaccga attggtgaca atgttactat
    30661 attaatttat gagatggaag tgggaatgga tggatagaaa acttttaaaa gaaaagcaaa
    30721 tccaactaat ttttcaacta gaacaagaag aaaatcgatt tattcgaaag cgtttaatag
    30781 aagagttgga gttttttgaa gcgcttgggg acagagaaaa aggactgtta acggcggagc
    30841 aaaagttgct tattttaaca ccaagtgagt accgagaata taaacgaact aaatcagatg
    30901 tgcaaattag taggttaatt ggagtatcga gatcgtctct tgcggaatgg aagcgaaaaa
    30961 aaggtttaaa tagaaaaaag ccgcaaccgg ttcagcagga aatgattgat gtattagctt
    31021 ttcatttaga taaaacaaaa gacgaaattg gcgctttacc tgcttcggcg attgaatgtc
    31081 agtatgaggc ttttgtgatt aatgaagcgc acaattaagg agtgataaca tgcaggtttt
    31141 agttttacca gaaaataagg atatcaatta tataaaaacg gtccaagaag taaaacgatt
    31201 ttttgctgat tttgagcggt ttcggatgat tacggggtta tcaaaaaagc cacagttact
    31261 tagaaatggt tttctggaag agccgcagtt tgcgccggta gcattttctg ctagacataa
    31321 taaagaggtc attttggaag cgcgatggtt ggtagagaaa tatactgaaa tgttaaatca
    31381 gatggatgat ttatatcgca ctattttgat ggaatgttac gtggaacgaa aacaagatgt
    31441 ggcggtaatg atggatttac cgtacgaaat tgcccagttt aaacggataa aaaaacgagc
    31501 agtattagaa atcgcaacgc taatgggaat tttagtaagg aaatgatgat actttcgtga
    31561 tattttgaaa cgtcatttta cgattaatat agaagtaagc taattgtcta gtaagcggat
    31621 gacgataaaa gctgcatcag aatgaaggtg caccgatttt ctgataatac aagaggttgt
    31681 acaagaaatt tgtttttatg attatatttt tcatccgttg acataaacaa atattctatt
    31741 ttggaaagta aagttcggag gaataaatta tcaaatgtgg tctcgaccga attttacttt
    31801 ctgtttttaa aggagtgaac gcttggtgaa gagtttaagc ttcatgagag ttttggaagc
    31861 agtgagaaca atgctccagg aaaaaggcgg actagatgtt tctattgtaa tgcgtgacca
    31921 agtggaaatg cctacaacga tgatcgagat gattgatcaa gaggaagaag aaagccaaac
    31981 tgcctggaaa gaaaaatacc gttttgcaat ccatcattat acaaatgaaa cggacttagc
    32041 gggagtcgaa atgatagata cgcttatcca aacagggttc actttgcctg aaggatacaa
    32101 attaatcgct gttcgacatt acggaaaaca aaatttagtc aaagaaaata cgttaattca
    32161 cgcaaaaacc agttttgaag taagtatttg tcgtgaatta aaagtaaaaa tttaggggga
    32221 aatattaatg gcatttgaag agaatttata ttgtgattat acaccgggag ctgctaaagc
    32281 ggtcgcgggg aaagatgtaa ttttagcagt ttttaacgca gcgggggata agctattagc
    32341 ggttgcgggg caacaaggtc taactgtaaa ccgttctaaa gatagcattg aaattacatc
    32401 taaagataca gttggcggat ggaaatccaa aattggcggt atgaaagaat ggtcaattga
    32461 aaatgacgga ttatatgtcg ctgatgcaga gtctcacaaa gaattggcga aatatttcga
    32521 aagtgatagc ccggtttgcg tgaaaatcat taatcaagca tctaaaaaag gtcttttcgg
    32581 tggtttggca attgtagctg actatagttt tgaagcacct tttgatgaag cgatgactta
    32641 ctctgtaaaa ctagacggaa tgggtgcgct tgttgattta acgattactg agggcggaga
    32701 tcaaatgccc ggcgaaacac ctgtagcacc agcagaataa aatagagagc cactgaaata
    32761 agtggctttc ccttaggagg aaaataaatg tttgaagtga atgatacaac ttatatttta
    32821 cgatttaata aacaaaaagt taaaacggtg gaattaacat cagggattag tttagttgca
    32881 gctttgactg cgaataaagg gattttgagc taccaagtga ttgaaacgct atttgtttca
    32941 ggacttgtgg aagaaaaagg cttagtacct gtaaaacaaa aagaagcttt ggagattttc
    33001 gacaaattag tagaagaaca aggcttaatt tcgcttaatg tagctgttat tgagaaattg
    33061 caagaggata tgggtttttt gttccgttaa aacagattga atttgagtat tttggtgctg
    33121 aggacgaaga agtggatagt gaaatgaacc atgattttga tttggaaaaa caattcgctt
    33181 tttttgtagt taattttcag atgtccaagc atgattttga agaacttact gaagtggaga
    33241 aaaatttcat catgaaagaa tgggaaaaca aggtgatttt tgaatctact atgcttcgaa
    33301 atgcagtttt aaatgcggaa caaaatctca atcgaaaacg aaattcacgt tttatcgact
    33361 tgcataaaaa acgtcagaag aaagccgatg ttaattatac agtaaatgca cttcaagcaa
    33421 tttccgataa tgaagcgaag gaaggtaaag cgtggattga tcggatttat ggtgcaaatg
    33481 ggttacgaag acctaagaat aaagaagaaa gggggaaagt gaatggcgga ttctaaaagt
    33541 tttacatttg aactgaacga gagcgtttta acagcgcaag ttggcaggct agatgagatg
    33601 gcgatggttg tagagcggcg gttttcagag ctcaaaatga ctattgaaga tgttggaaat
    33661 gctgatccag gttcgaaaat ttccgaatct ttaggtgggc tgcagtctgg gcttggcacg
    33721 attagttcgg cgtttggaca actgggttct agtagtgagg cgattacatc cggattcggt
    33781 actgcggttg gttctgttgg tggaatcacg gatgcgttta aaaatctagg ttcaagtgtg
    33841 caaaatggta cgttattttc aagcttggca accgggattg gtggcatgag tacaatgctt
    33901 ggtggagtat ctggcggcgt tcaaggaatt acaaatctag ctagtggatt tatggaattg
    33961 aagaagcatc taggcggttt gatgtcatct attggtggcg ttggtggaat tatgggtaaa
    34021 ctgacctctc caatggggtt agtaattatc gggattgtag cgttagtagc tgcatttgcg
    34081 tatttgatga cgacgaatga atcattccga aatacggtga tgtcagttgt aacacaggtt
    34141 gcgcaactgt tcggtcaact tgtcgccagt ttaatgccga ttatcatgca aattgttact
    34201 gcggttatgc aaattggtgc cgcgttaatg ccgatggtta tgcaatttat tagctttttt
    34261 gcgcaattgt tagcccaatt aatgccgttt attaatatgc tgatttccat gcttatgcct
    34321 gttattatgc agattgttca agttgttatg tcacttgttt cggcactatt accgagcatc
    34381 atgacagtga ttcaaggcat tatgagcgtt attcaatttt taattccgat aatcatgcaa
    34441 attgcgacgg tggttgtaca aattgttgta acgattattt cttatataag taaaattatg
    34501 ccgattgtta tgacgattat tggcgttatt gtttcgatta tcacaacgat tattagttac
    34561 gtcgttatta ttgcgacgac gattgctagt gttattggga aaattattag ctttattgcg
    34621 agtgttatta cggcggttat cgggattgtg caaccaatta ttggctttat tactaatatc
    34681 tttacgacta tcgtgacgat tattggtgca gctttccaaa tggtatttac tgttgcatcc
    34741 aaaatctgga atgccattat gacgacgatt tccggaatta ttgaaggaat caaagcagtc
    34801 atcacaggta tttctactac ggtttcatca gtgtttaacg gagtgaagcg cattattaca
    34861 ggtgtttttg acggaatcaa aagtgcttgg ggtggtttaa ctgattttgt aggaaatatt
    34921 ttcgatggtg tttcaagtgc aattcaaacc gtggtagata atgtcaaagg ttttgtaaac
    34981 gtcgtaattc gagggattaa tggagccatt ggtttaatta ataagattcc aggcgttgaa
    35041 atcggcaaaa taccacaatt aatttccggt acaacaaatt tccaaggtgg ctttgctcga
    35101 atgaatgaag gcggccgagg cgaaatggtg gttttaccgt cgggttcgca agtaattccg
    35161 cacgatgcaa cgatgaaata cgcaagggaa agtgcgcgcg gaaataaatc aatcctttac
    35221 acgagtcaag gcgctgattt ggctagagtt gaaaatcttc tcgagcgctt actacaaaaa
    35281 aatcctgtaa tcaaaatgga tgacaaagtg gtagccgagg tagttagccg taaccaagct
    35341 aactcatttg atcagtacaa ttacacaatg ggaggtgcag cttattcatg agcgacttgt
    35401 ttttagaatt aaatggaaaa gtgcattcgc ttagtgagac atttccaggt ctttctgtac
    35461 aagaagtttc cagacaaagt ccccagttaa gcatggaaac tgctgaaatc gctgggactg
    35521 atggggttat cccgggaatg acccaattta aaccgtttat cttttcagca aaatgtaatt
    35581 tgcaagcact tgatattcca gattatcatt tggcagtcag agaaatttat gaatttttat
    35641 tccagcgcga tagttattat atttggagcg atcaaatgcc aggaattcgg tatgaggtgc
    35701 atcctaaacc agttgatttt agtcgagaat cggatcgtgt tggtttactc actatagaat
    35761 ttgatgtatt taaaggctat gcggagtcac gtggcacgag ccttgaccct atgacttttg
    35821 aagtggattt atggcaaatg ggaatgaatt tatcgaaccg tgatgattta ttttatattt
    35881 ttaaagaaaa tacatttcgg gtctataatg cggggagcga ccgtgttaat ccactgatgc
    35941 gacatgaatt agatattgcg atgacggcga atgggacacc aacgattcat aatcttacaa
    36001 cgggagaatc cttcgagtat cggaaagcgc tccaaaaaac agatgtttta ctgttgaaca
    36061 atatttatcc acttgttaat aaccgccgtg ttggaaaaga taccaatcat gggattatca
    36121 cccttgaaaa aggctggaac gattttgaaa tcaaaggtgt aacggatgta acgattgctt
    36181 ttaattttcc gttcatttat cggtaggtga tagatatgga ttatgtgatt attcaaagta
    36241 tggacaaaga agtggaagag attctaacag acattgatta cggctccttt tcctacgatt
    36301 atgaaaaaaa tacaagtcgt gctatctcgt ttactgtgaa caaaacgaaa cagaatgcag
    36361 caatttttga cttggtagga aatgaagcaa ttttaacata tcaagggcag caatttgtta
    36421 ttaaaaaatg tacgccaaaa tctattggag gaacaatttc aaagcagatt acggcccagc
    36481 atatttgtta tacagtgcaa gatcatgtgc agtataacgt gaaatctgga cgaaaaaaat
    36541 attcgattca aacggtattg gaatttgcgt tacaagataa tgtactagga ttttcttatg
    36601 aaattcaagg gagttttcct ttagttgaac tagaggactt aggaaataaa aatggcttag
    36661 agctagtgaa tttatgtttg gaagaattcg gagcaatttt atttgcagat aataaaaagc
    36721 tttattttta cgatgaaaaa agttggtatg taaggacaga gaagcaattt cgttatttat
    36781 ataatacaga agaagtttcg gtggatacga acacagataa tttgaagacg gagataaaat
    36841 gttacggcaa gcaaaaagag aatgccgata agctgactgg agataataag tacatggcgg
    36901 ttgtcacata tacttcgcca aatgaggcta tttacgggaa acgaatggca aatgctaaaa
    36961 gtgatgacaa aatcacgaac aatgatgact tattaatttt tgcaaagaaa caaattctag
    37021 atgttccgga gacagcgctt actatttctt acaaaggaaa agaacctgtt ttagagcggg
    37081 atgtttggta tttcattcat gaaccgatgg ggtttgaaac agaagtaaaa gtaacgaaaa
    37141 ttaaatcgag tcatccttgg agtaagaagt ttcaagaaat tggcttcagt aattcgcgac
    37201 gagatatggt ccgaattcaa acgcaaattg ctaatcaagt gaaaaaaacg agcgtagata
    37261 caaataaaat taattcgttt tcgagcatcg caatgaatgc ttatgattca cgaattttaa
    37321 cggaagtagt aggtgtggta gatggcgact gaaattagag tgttaaaaaa tgtagatgat
    37381 acagttttct atccgaagac acatgtaacg gctgtggaag gtttggactc ggctacaact
    37441 actacatctg gattaatgcc cgccagcgac aaaacgaaat taaatggaat cgaagctaat
    37501 gcagaaaaaa ataatgtgac tgcaatcgat attgccaatt ggaataaaaa acaggacgca
    37561 attttggttt ctgaaaatgg ctctaatttc aaaataactg tcacaaatgc tggtgaacta
    37621 aaggcaacaa aagtggaata ggaaggaggt tgcgtatgaa gttggattta tggaaatggg
    37681 aaatgcttct tcaaggtcga gaatttagaa ataaaacaaa tgacaactgg caaaaattaa
    37741 tggattggtc cgattttatt tcaacaggtt taagcgcgat ttatgtctat gtaaataaag
    37801 cagatgctac tttaaataac aaaattgata ctgtggataa ggcggtaaat gcaagggtaa
    37861 atgaattgat tagcgggaca gagcagttaa gtgaagtggt cgacgccaga gtggatgcat
    37921 ttggcgcacg cttcccagta ctaagagaac gtttaaacca agaacaggta atttacaata
    37981 aaaaaagcac ggtgcaattt gacgtgaata ctattataaa tatggaaaaa caagatattg
    38041 ggctgctaac aagtaaaaca atctcggaag cgcaaaccgt atgtttttta aatatatcaa
    38101 gccttaatga agacgcggat attgttcttg aaaaaacagg cgagacaagc ttctcagaaa
    38161 atttaacaag tctagtcttt gcaaaaattg gaacgaatga acgctaccaa atggagccag
    38221 ttggtgcata aaggaggagt gagcaatgac tgaaataaag cgaatgctgc agacaaaaga
    38281 agataattca aaagaacaat tttatccaga gacgcatgtt gcggggattg ttgggttgac
    38341 ggaatatgtg tcaggccagc ttccgacagg cgtggttagt gttaatggta aggctgggcg
    38401 cgtgttgcta gatgcagaag atgtccacgc tgccaaaaag agccacaacc acgaagtcgc
    38461 aacatacacg acggacggct ttatgagttc ttttgataaa caaaagattg atcaattagt
    38521 ttcaccagaa gctggcgtga caagcataaa tggcaaaaca gggattgttg atttattcgc
    38581 agcggactta gatgcagcag agataaacca cacgcatgca gaagcaacta ctacagaaag
    38641 tggttttttg gcaaaagagg acaaagaaaa actagacgcg atgcaaataa tcgcgctgga
    38701 aactattaag gaggttatag aatgactaaa attgtaaaaa tgtcagagaa aaacgaacat
    38761 ggaactctag aacaattcta tccagaaaca catgcagagg ctgttaaagg acttgtgtcg
    38821 gtttcagagg aagagaaggc gacatggaac gagaaagaaa ctactgcggg tgcggaacaa
    38881 aaggcgaata ctgctttgaa tagtgcgaag gattatgttg atacgattgg aaaaggaaca
    38941 gtaatattta aaggggccaa tattatggct gctggtcaaa aatatacatg gaattcttcc
    39001 aaactgaaat ttggaatcac tttattattc agtcgttacg attcagcaaa taatactcct
    39061 ttagattatt attatcactc tgttttctta tcgaaagctc aattagcaga attagcaggt
    39121 aaaggtttgt tagttcctat gccctcagca acttatgggg aaagaaaata tttatatgtt
    39181 tctgaaacag aagttgctgg acacaatgat aatactaata atgcttcttg ggcattacgt
    39241 cagctaactg taatgtaact aaaaaggagg ttttccatgg aagtcatact aaaaattggg
    39301 attttaggtt ttggcgcgat atttggatac ttgtttgggg aagtggattt attggtaaaa
    39361 gtgctggtgt gctttattgt agctgactat atttctgggc tactcgcttc agggtatctt
    39421 ggggaactta gcagcaaaat gggtttcaaa ggaatcgcga aaaaaatcgc tatcttaatt
    39481 ttagtggcta ttgcgcatca aatagatttg attcttggaa cgcataatac aacgcgggat
    39541 gcggttatct ttttctattt ggcgaatgag ctgatttcca tcttggaaaa ttttgttcga
    39601 atgggaatga aggtcccgga agtattgaaa aatttaattt tgattttcga ttctaagtca
    39661 ggggacgagg aggaaaagca tgacaaagat atggattgac gctggacacg gtggtaagga
    39721 ttcaggtgcg agtggtaatg gacttgttga aaaaaattgg gtactaactg tagcaaaaca
    39781 acttcaaacg gagttagtta aagctggttt tgaagtggga atgacaagga caaatgatac
    39841 attctatgaa ttaagtgatc gtgcgaagaa ggcgaatagt tttaaagctg atttatttat
    39901 ttcgcttcat tttaatgctg gtggcggtaa aggatatgaa gattatattt acacatccgt
    39961 cccggctgca acggtagaaa tacagaaaat cattcataaa aatattattg ctaaagttac
    40021 taaacacgga atgaatgatc gtgggatgaa gaaggctaat tttgctgtat taagagaaac
    40081 agcaatggac gctatcttac tggaagctgg tttttgtgat agcactgatg cattaattct
    40141 tgagaagaaa gcttatcaaa ctgattattg tttaggaatt gtagcagcag tacaagagat
    40201 ttttggggct atggtaacaa aatatagggc aggtaaatat ttgacaagtg atgatgctat
    40261 atcaggcaca aatattaaag gatatttaga agcaggaaca aaggtttttg tttataaaga
    40321 aacagaaaaa acgcttaatt taactactac aaagggtgtt ccaggaagtt gggttttaaa
    40381 aacagaagtt aatacaggaa aaagataaaa aaggagcggc caatttggct gctccttttt
    40441 ctcaattaac ttctcttccg caaaacataa agcgcagtag tcgttaaaac aataccgaat
    40501 acagttgcaa atccagctgt atcaccagtt gttggtaagg atgtgttagc agaagttcct
    40561 gttgttgatg tgtttggtgt cgtagttgtc ggatcttcgg tagtagtagt tccgccgttt
    40621 gtgccggagc cgttaccgtt atttgttccg ccatttccat ctgtgccacc gttatttccg
    40681 tttccattac cattgtccgt gccgccgttt ccattatctg gaggagttgt tgccgcagct
    40741 tgaaccgttg cttggaaagt ggtgctgtat ccgttcgggt cagtgatagt tgttgtgatt
    40801 tggtcgcctt ttttaaggtt taaagatgtt acatctacgg aaaacttgcc atttgcgtca
    40861 gctgttgcgt taggtccggc agcaagggcc attcttgcgt tagcagttgc tttttgaaca
    40921 gagacagttg cgccaggcaa agttgttcca gttagagttt tgtctttttc ggctagttta
    40981 ttgatttttg ttgcgtcttt gattgctttg atagctgcat cttcggtttc tttgtcgatt
    41041 tcagcttggg atttgtagac tttacgtcct tctttttgag ctgtaatgac ttttccagca
    41101 gctttttggt ctttgatgta gttgatgaat gtttcagtgt ctgggtcgat tgcagttact
    41161 aggtttgctt ttttgaaggc agaaaatcca tcgccaccgc caaataggaa gtcattgatt
    41221 acgactttgt atttttggtc ggcttttaaa ggagttccgt cttctgttgt aacgcttgca
    41281 actttgtacg catgatctaa gtcatctgta tcagtgaaag tatattttaa tccagaaatt
    41341 tgtaggaaat aagtttggtt gcttaaatat tgttggttta gagcttccaa aatatcagca
    41401 ccagtcattt ctactacttg aagaatgtta ccaaatggtt gaacagcttg tgccgcgccc
    41461 catgtgattt cgttttggcc atttgcaaga cgagtagtaa ggtcagaacg aattccgccg
    41521 ttgttagtca tagcaaagtc gacatcggcg ccggctttat ttgccatgta acgttgcgca
    41581 tctgtaatca tgttaccaag ctctgattct ttatcatcaa ttgctttgtt gtctggattg
    41641 gtgtcacgag aaataacgtc tttattggct agtccgatag tttcgttgat aaccccttca
    41701 atgcggcttt tcgcatcttc agtaacagct gtaatatcgg catttggtgt gacgcttctc
    41761 gtgttgtatg taattttagc gtcaggtggt gtaacgaaat cgccggtagt tttatcaagt
    41821 tcgccagtta catctgaaaa agctttacca ttgttgtaac tttgaacgat acgagttttt
    41881 ccgactaatc catttgtgta ttggtgattg tgtccagcaa gaactaaatc gaccgagtta
    41941 tttgggtcta attcatttgc ttttgtgatc atattagcag cttcgccagc tacatcttgt
    42001 tttgttccag tgttaggatt tccagtagaa agtgcgggaa cgtgagatag aacaacgatt
    42061 gcgttaacgc cttggcctct tagttcagca gagtatttaa cgattgtttc tgcttcgtca
    42121 aggaaatcgt agtctttaat atgatttgca agaactaaat taggaatttc tgttgtaacg
    42181 ataccgatga agccaacttt gacgccatca atttctttta catagtatgg taaaaagcct
    42241 tctgcgactg tgtttgttcc tttgttgacc acgttagctg cgacgatttt catgtcactt
    42301 ttaacgcgtg gataagcttc tacgattggt ccgaatttgt ttgtagaaac tccgtccaaa
    42361 attcgtttgt attctggtaa tccttcatca aactcatggt tacctaatgt gccgacttcg
    42421 aaattcattt tttggagaac tttcatcgtt ggctcgtctt gaagtaaacc tgatactgct
    42481 ggacttgcgc cgaccatgtc gcccgcttga acacggatag cattgtcagt tgtcgcccca
    42541 ggatttgcct gtaaaaatga gttagtggca ttatccaaat tggtagctaa gtaatctgct
    42601 ccgccaattg gtgagcctga tgcatcttta gaggctgttt caagcgctcc gtggaaatca
    42661 tttattccca aaatctgaat gggaacggta tccgctgctg cttgtgctgt tgtcccggtg
    42721 aatggtgctg taagtccgat tgtgagccct gctacgagta aaacatgtgt agttttcttg
    42781 aaaaatttgt tcactttcac actctccctt ttttcgccag tggcaatttt gtaagcgcta
    42841 actcataggt gcctagctat aattgtagca aagaggaatc accctagcaa taggaaatat
    42901 ggattttgtg taaatgtagt gataatattt ggctatattt tcatttcgat ggaaaaaagg
    42961 gtaaactaga gaaaaaggag ggataagatg gatatctcaa gtacggaaat atgggatgca
    43021 attaggagaa atagttattt gctatattat caaccaaaag tagacgcgaa aacgaataaa
    43081 attattggct ttgaaggttt gattcgatta aaaacggcaa caaccatttt ggctccaatt
    43141 gatttctttg atgatattgt ccttttaaat gcaacgcggg aaatgcaaga ttttgttgct
    43201 gaaacagcga taaaacagat taatcagcta ggaggacgtt tttcaatttc gattaatatt
    43261 ccggcacatt atgtagcgag cagtacgtat atgacttttt tacatgatta tgtgaaagaa
    43321 catttaaagt atccggaatg cttagaaata gagattatcg aacgaggcga aataacggaa
    43381 ctagctatag cggataaaaa cttacgaaaa ataaaagacc ttggtgtcaa agtaagtatg
    43441 gatgattttg ggaaaggtta tagttcgctt gcgtatttac gcagcttacc gattgatatt
    43501 gtgaaaacag atatgtcctt tatcgcgctt ttaaaaacag atcgaaaaca acaaattatt
    43561 attcgagcga ttgtcaattt gtgtcatgat ttaggcggga aagtagttac agaaggcgta
    43621 gaagacatgg agcaagtcga aaaattacgg gaaatgaaag tagactattt ccagggctat
    43681 tattttagtc gaccactacc gatggaagat attaaagaaa aatattcctt tgtgtaagat
    43741 gtataaataa aaaattggtt ggtgtgagaa tggtaattta ccaaattcac accaaccaat
    43801 tttattttat ttgattaaat tatttgaagc atcttttaca accacgtcat gcgcgccgcc
    43861 ttctacgata gaagtggacg aaacaagggt gatttttgct ttttgttgta attcagggat
    43921 attgagcgcg ccgcagttac acatagtaga gcgtactttg ctaaggctga tggcaacatt
    43981 gtctttcaaa gatccagcgt aaggaacata agaatctacg ccttcttcaa aagataattt
    44041 cttgtcgccg ccaaggtcat aacgttgcca gttgcgcgcg cggttagctc cttcacccca
    44101 atattctttc atatacgtgc cgtttaaatt cactttatta gtaggacttt cgtcaaaacg
    44161 agagaaataa cgaccaagca tgataaagtc agcgcccatt gctagagcta gcgtcatgtg
    44221 gtagtcataa acaattccac catcagaaca aatcggaata tatacacctg tttcttcaaa
    44281 atattcatcg cgtgctttag ccacatcaat tagtgcagtt gcttgcccgc gtccgatacc
    44341 tttttgttca cgcgtgatac aaatggaacc accaccaacg ccaactttaa cgaaatctgc
    44401 gccagcttct gcaagataac ggaaaccatc gcggtcaaca acattccctg cgccaacttt
    44461 gaccgtatcg ccgtatttac cgcgaacgta gtcaagtgtg cgtttttgcc attcggagta
    44521 accctcagag gaatcgatac acagaatatc tgcgccagct tcaactagag cggggacacg
    44581 ttcttcgtag tcgcgcgtgt taataccagc tccaacaacg taacgtttgg aggaatcaag
    44641 tagttctaat ttattttctt tattagagtc atagtctttg cggaatacca tatggactag
    44701 gtgctcgtta tcgtctacaa gtggtagggc atttaatttg ttgtcccaaa taatgttgtt
    44761 agcttctttt aaagtggtcg atttgttagc agtaactaat ttttcgaaag gagtcatgaa
    44821 atctgctact ttttcatcag ggctcatgcg cgttacgcgg tagtcgcgac ttgtcacgat
    44881 tccaagtaat ttaccgtgcg ctgtgccgtc ttctgtaact gctactgtag aatgacccgt
    44941 tttttctttt aaattaagga tgtcttgaag tgttttgtca gggctgatgt tggaatcact
    45001 aataacgaaa ccagctttat gatttttcac gcgagaaacc attgcagctt cactttcgat
    45061 ggactgggag ccgaagatga atgatacgcc accttctgtc gcaagcgcaa tccccatatt
    45121 atcatcagaa acagcttgca taattgcgga aacaagcgga atgttcattg tgatagcaga
    45181 ttcttcccct tttttaaatt ttacgattgg tgtttttaag ctaacatttg ttggaacaca
    45241 ttcagcggat gagtagcctg ggacaagtaa aaattcacta aatgtgcggg acggttcttc
    45301 aaaataaaat gccattattt ccactccttc ttctattttt aaatgaattt ataaaatatc
    45361 tttattattt caataactgg atggaaagtc aatgattggg ggagcttttt cggacgtttt
    45421 cttttggggg aagagtggaa tagatgaaag gtagagaaac tttggcgaag gaggtaatca
    45481 gatggacgaa gaaacattgc tagaacgtgg ctaccggaag tatcgcgggg cggaggtaga
    45541 tatttatttt aatacaaata tttgcgagca ttcgggtaat tgtgtaaaag gtaacgcaga
    45601 actttttaat ttggatagaa aaccatggat tatgccggat aatgtatcga aagaagaagc
    45661 gaaacgggtg attcatactt gcccgagtgg agcgcttcaa tatatcgaaa aataggagga
    45721 tatcagatgg aatataaaaa cggtgaaaat agaatttatg cggtaaatga tgaaggagtc
    45781 gaggttggtg aagtgacttt tgtgccaact ggggaagata tgtttattat tgaccataca
    45841 ggcgttgatg atgcggctcg aggtcaggga atagcgcaag aacttgtgaa acgtgcggtc
    45901 gaaaaagcga aaacagaagg aaagaaaatt gttccgcttt gtccgtttgc gaaagcagaa
    45961 tttgctaaga agccggaata tcaagaagta caagctgcaa aataagaagt gtagactagg
    46021 ttttatgcct agtctatttt tataaaaaat tttagaattc cggttttctc ttcttgacat
    46081 ctgctttgtt tcagtgtatc tttaattcac agtaaactta taggaataat agtattacgt
    46141 tttcttatca agagcggtgg agggaatcgg cccagtgaag cccagcagcg gagcgcaagt
    46201 tctatgctaa ttccgatcag aagtaatatt ctggcagata agtagtagct tttaatgagg
    46261 cgcttcgatt ctgaccaaaa aacagaggaa gcgttatttt ttagcgctta aagaggggag
    46321 tttttgttag atgaagaaat ttttattagt agcggttatc tcggtttttg ccttggtgtt
    46381 aacggcttgc ggaggctctg gcgctagttc agacaaagca aatggttcag gcaaagcgaa
    46441 agacggcggc tctctaatta tcggcgttac tggggatcca gaagttatca atccgaacta
    46501 cgcttctgac cgtgtaacat taacgattca acaagctgtt tacgcaccgc tattttggga
    46561 agttgacggg aaaccggcac ttgcaaaaag cttagatatt tcagatgaca acttaactta
    46621 cactgtgaaa ctaaaagatg gtttaacttg gcacgacggc aaacctttaa ctgcagacga
    46681 tgtagtattt actgtaaatt ctattttaga tacaaaacaa aacagcccga accgcggcaa
    46741 ctttgttttt gacgataaac ctgtaaaagt agaagcagta gacgacacaa cggtgaaatt
    46801 cactttacca actgttgctc cagcctttga aaatacaatt aaaactttct tcccaattcc
    46861 aaaacacatt tttgaagggg tagaaaacat cgagaaaagt gataaaaaca aaaatccaat
    46921 cggctcaggt ccgtacaaat ttgttgaata caaaacaggc gaatatgttt ccctagaacg
    46981 attcaacgac tattttgacg gcaaaccaaa attggataaa gttactttcc gaatcacaaa
    47041 agaccaaaac gctgctaatt tagcactgca aaatggcgaa atcaacctaa aatccattca
    47101 accttctgat agaaacaaag tagaaaaagc gagcgcggta aacattatca cttacccgga
    47161 aaatcgctta agctatgcaa cattcaacga aaaccaacca gcacttaaat caaaagaact
    47221 tcgccaagcc ctttcttatg cgcttgatcg tgaagaaatc attgatgctg catacggttc
    47281 agatgaatac gcaaaaccag cttcctcgtt cctaacagaa aacacaaaat atttcacgga
    47341 taaagtagaa acatacgacc aagacattgc caaagcgaaa aaattagtaa aagaaagtgg
    47401 ttttgataca agtcaaaaac taactgttta ctatttaaac aacagtaaat cacaagaaag
    47461 tatcgcgctt tacttgcaac aacaatacaa agaaatcggc gtgacacttg acttgaaacc
    47521 aacagatcca aatgcactaa gcaacatcac acttgaccgc aaaaacgcag actactctat
    47581 cgcactaaat ggttatatca tggggaacga tcctgatgcg tataaatccc tatacctaag
    47641 cgatgcgcca tataactatt cgaactacca caacaaagat ctagatgcac tttgggaaaa
    47701 aggtgctgta actgcagacg ataaagaacg tcaagaaatc tatgaaaaaa tccaaaacac
    47761 cattgctgat gacgctgtaa tttatccaat ttcttatgat aatgcagtgc tagctcttga
    47821 tagccgttac ggtggtcaaa aagctgccac accacaacca gtaaccatgt tccgtgatct
    47881 ttctaaacta tatttaacgg aataataatt aaaaatcatt cgtaaaaaat ctggcctgcc
    47941 atgcttgttt ttggcaggtt caggttttta cttgtcattt ttagtgtttt agataggaga
    48001 taaattatgc taaaaacaat cataaaacgc gtattgcaaa ttattccgat gctatttatt
    48061 atctcgatta tttcgtttgc acttataaaa ttagcgcccg gggatcccgt gaattctttt
    48121 gttacgcctg atatgaatcc tgacgatgtg gaacgaatta gacaaagttt aggacttgat
    48181 caaccaattt atgtgcagta ctttatttgg cttggaaact tgttgcaagg aaatcttggt
    48241 tattcgattg tgaatagcca gccagttttg caacaaattt tagagagaat tccggcgaca
    48301 cttggtttgg tgggaacttc gcttgttctg acgctattat tatcgattcc acttggttta
    48361 gttgcggcga attacgaaaa tacgtggatt gataaagtat taaacgggat ttcatatatt
    48421 gggatttcga ttccgatttt ttggtttggg atgattttaa tagatgtatt ttcgattcag
    48481 ctaggttggc ttccaagtct agggatgcga acgattgggg tcgactcttt ttgggatatg
    48541 gcggagcatg cgattttacc agttataacg ctgactttcc aagggtgtgc ggcatattat
    48601 cgttacgtac gctcgaatac catcaaccaa ttaaaagaag aatatgtttt gtttggttat
    48661 gcgaaaggtc tatccaaagt gcaaattatg gggcatcatg tcttgaaaaa ttccttgcta
    48721 ccagttataa cactacttgg gatgtcactt ccgcaagtca ttacaggcgc ttttattacc
    48781 gaaagtattt tttcatggcc gggcatgggc tcgcttggaa ttaacgcgat tttccaatta
    48841 gattatccag ttattatggc gattacgcta ttttcagcgc tgttattaat tatcggaaac
    48901 ttgctggccg atttagctta tatgattgtc gatccgcgga ttagggaaat ggggtgagga
    48961 gttcatgatg cgattagatt tttcgaaaaa aacaatgcaa gatttcgagc gggatgcaga
    49021 agttgttcac gcaacacgag agcgtagttt ttggcgtttt atgcttgctg accgccgagc
    49081 tgtttttgcg acgagtgtgc taatacttat tacggtggct tgtattttcg cgttcctttc
    49141 gccttatgac cctaatgctc tttccgttca ggacaaactg atgccgccaa attcgtcgca
    49201 ctggtttggg acggatgacc atggtcggga ttacttgacg cgtgtcttgt acggtggccg
    49261 ggtttcacta cttgtcggtg tatttgcgat gatgattgcc gttgtcgttg gaacgcttgc
    49321 tgggacagtt agtggctact ttggtggatt cattgacaat atggtgatgc gttttcttga
    49381 tattttcatg tcgattccgt catttttcct actaatgatt ttaaatgcat acttaaaacc
    49441 gggaatttcg aacattatta tcattatcgg attgctttct tggatggaag tggcgcggat
    49501 agttcgagcg gagacgttaa cattaaaaga acgtgaattc attttatact ccaagtcatc
    49561 aggtggcgga tttttccaca tcatgttcaa gcacattatt ccaaatgcga tgccatccat
    49621 cgtcgttgca gcttcattaa acgtcgctac agccatttta accgagtcag cactaagttt
    49681 ccttggctta ggcgttcaac agcctaacgc ttcgtggggc agcatgctga acaatgcgca
    49741 aggttacgtc ggcgaagcaa catacttggc gcttttccct ggattactaa ttttaatgac
    49801 catcctttca ttcaacgtcc ttggcgatgt actgagaaaa gggttatcac gtagatatta
    49861 aatgtaaaaa cactttgatt ttttcagtca aagtgttttt ttgtttttta aagaaaaggt
    49921 acttaaaata gaaacgtaaa aaacgtgttt tagccaattt ccaaggcata aattcacaaa
    49981 acgctcacaa aacgagaatg cgtgcggtgc tataattaag gataaggttt cattattata
    50041 gacagagatg aggcgcagaa atgagtgaaa taaaagttaa agaagcaaca ttaaaaaaac
    50101 acgcgacaaa gttagaatca aaaggtaaat caaccgaata tttaccaatg aaaggtggca
    50161 atatggctta cagtcaagcc aattccatca accattttcg aacagcattg tttgacttgg
    50221 tagacgcggt ggacaatttt caaggtgtgg taggaacgga tgccaaaaga ttgaaagaat
    50281 taggcgtatc atttactcgc aaagaccaag agcttgaacg aggcatggga ttgggaggta
    50341 aataaatgga tgcaaagagc cagcaaatgg agacacaact gcaactgctg aaaaaagaac
    50401 aatccgcggc cgaagatttt ttgcaagatt tacaacgaca acaaaatgaa caagagtggt
    50461 tagcagaaga ttttgcacgt gtccatcaag aagaacggga gtcgctggag cttctacgcg
    50521 aagtttggca aggcgcagaa tcaagaagtt tcggctacta tttggcagat ctacaggaag
    50581 aagaaaaaca gaagtggcat aaaaaaatcc aagcaaacca agaagaacac caacaaaaaa
    50641 tcaccgcttg ccaaaataac atctaccaat tagaaaatca acaacaagat ttacaaaagg
    50701 agttgttaca gtgagccgaa ttgacatcgg agaaatacaa acctttgcgc accaactaca
    50761 tacagctaat gaagccggaa gaaaaagcat taaagacatc aaaaaagccg tgaaaaacta
    50821 taccgaagac ggcagtttaa aaggaaaagc gattgatgca tcgaaaatta ctatcaaatg
    50881 acctattttc cattatgtga tgcgataatc gaagcaatga acgaaagcga agaacgatta
    50941 gcgcaatata tagctgattt ccacgcccaa gtaagtggac ggttctgctg atgcgagaat
    51001 tgatgcggac ggcttatacg aactcgggaa aatgattgat cgcatcgaag cgaaaaaaga
    51061 agcactagcc cagcgaatga atactggaac agaagggcaa atgcaaagtt accgttccca
    51121 gctgagtatc gcctacaaac aagaaaatat cttagaaaaa tacttggctt ttgaacaaag
    51181 tcatggcggt ttttttgata atttaaccga tttagtccaa ggaattcagc aaaccattcg
    51241 cgaactccag tcgaatattc agtttaacag taaaacgggc acctatgata tgagcaaatt
    51301 gaatttcacc accgtaaccc ggatgcaaaa tgccttagga aaagcgctaa aaaataacga
    51361 aacaacattc aattttgacg aatatcaaaa aacgtaccgt ggtcaaatgt gggtgttaat
    51421 gaaaaatggt atagtagacg tagaagcaac gaacgcgtac aatgccgccg tgcttaacgg
    51481 ggaattagca cataaaagca atgaagcaca ggaagaagcc gagttgttgc aggcagttat
    51541 tcaatcggtg aaagaaggaa tagacccggt tactgggcaa gagataagta aagcgcaagg
    51601 gtttggtatt ataagtggtc ttgttttccg ctatactgct ggaggttata aagggaagaa
    51661 gttcaaggtt tctaaagatt ggttacacag aagaaagaaa aataatggcg ttgaagttgg
    51721 aacggacttt gggaaaatag gtaaattagt taatcatcct aatattaaaa taaattggtc
    51781 tgaacactcc gaacatggaa tgtctagatt gaaacaacgt ggtctttcta agagtcaagt
    51841 tgacgatttt gtggagcgtg gaaaagcttt atcccagaat gggggagaaa aatttgcttt
    51901 tataactgaa aatggtgttg caattgtcag caaagatggc aaattagtta ctgcttgggg
    51961 taaaaaagat tttgatgaag gaatggaaaa aataatagaa aaattgtatg gaaagtaggg
    52021 tgtcattatg tatgaaaaag tagaaaaaat aataaatgat tgggatccaa tagagctgtt
    52081 tcccttagct ccaaaagatg aatatagtca agaaatcaac aaaataatta gtatt
//
LOCUS       DASDYK010000007        46915 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.007, whole genome shotgun sequence.
ACCESSION   DASDYK010000007 DASDYK010000000
VERSION     DASDYK010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 46915)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 46915)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..46915
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.007"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(108..920)
                     /locus_tag="U0308_000463"
     CDS             complement(108..920)
                     /locus_tag="U0308_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEM2315477.1"
                     /translation="MAENKRVISIENRIPELKKYRKKKLVRHLAILIGIFVILIAITL
                     YFLSPLSKLDKIAVSGNKQLTENEVRKESGLEIGEFVIGISNGKTEDTLKKNTLIKDA
                     TVSKEGINDVQINITEFKTIGYQQQDGKYYDVLESGIMLTDQPRQFPIGNDLLFQNFK
                     NGKTLEKMVAQINKLPKDVVSSISEVIYSPTKTDKNHIKLYMNDGNQVSADISTFAEK
                     MQHYPAIVAQLAKGQKGVIDIEVGSYFQSYYQQNAEKKAAEEAAKEKKETNE"
     gene            complement(943..2034)
                     /gene="murG"
                     /locus_tag="U0308_000464"
     CDS             complement(943..2034)
                     /gene="murG"
                     /locus_tag="U0308_000464"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEM2315478.1"
                     /translation="MKVAISGGGTGGHVYPALALIRELKKIHPEAEFLYIGTEKGLEA
                     GIVKREGIPFEAIEITGFKRSLSLENIKTVMRFLSGAKKSKQILRDFKPDVVIGTGGY
                     VCGPVVYAAAKLKIPTLIHEQNSVAGLTNKFLSRYTDKVAICFEEVSDSFASEKIVFT
                     GNPRASEVVGVDSEGALETYGLVSGKPTVLVFGGSRGARGVNEAVEAILPEWNNRDFQ
                     LLYVTGDVHYERIKDSLAELNLGNHISVQPFIYDMPKILNAVTLVVSRAGATTLAELT
                     ALGVPSILIPSPYVTANHQENNARALEKNNAAIVITEAELKNTDLMATVDSILNDEAK
                     LNGMKLSAKQMGRPDAAAKLVEAVLSIMK"
     gene            complement(2031..3398)
                     /locus_tag="U0308_000465"
     CDS             complement(2031..3398)
                     /locus_tag="U0308_000465"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEM2315479.1"
                     /translation="MKKIEMYHHKKVLVLGLARSGVSAATIMHKLGAFVTVNDQKPFS
                     ENPEAQGLLEQGIKVICGSHPIELLDEGFELVIKNPGIPYNNPMIEKALKLKIPVITE
                     VELAYQISEAPIVGITGTNGKTTTTTIIHHMLNAHKENSSLLAGNIGFPASAVAENAT
                     SDQYISMELSSFQLMGVETFKPHISVITNIYEAHLDYHTDRSEYVQAKWHIQKNQTAD
                     DFLVINWDQEELKNLTKQTKAQVIPFSTTQRLGQGSYVQNGNIMFNDEVIGARDNILL
                     PGEHNLENVLASVAVAKTLGVTNEEIMHVLETFKGVEHRTQFVVEWQGRKFYNDSKAT
                     NILATQSALKGFKNPVVLLAGGLDRGNSFDELLPFFKNVKALIVFGETADKIGRVGKI
                     AGIDVHYVDNVEAAVPVAYRESAPGDIILLSPACASWDQYRTFEVRGNAYMDAIGELI
                     EEVEK"
     gene            complement(3540..4514)
                     /locus_tag="U0308_000466"
     CDS             complement(3540..4514)
                     /locus_tag="U0308_000466"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEM2315480.1"
                     /translation="MSLYMLVSTFAVAFIITVIGVPLFIPFLVKLKFGQSIRDEGPKM
                     HEKKSGTPTMGAVVFITAMLISFLIFSFISGEVSAATWLLFIALALFGALGFLDDYIK
                     VVQKRNLGLTSKQKFLGQVAISILFYLVYHLNGFAETLNIPFTNIEVDLGWFFVIFIL
                     FWLVGFSNAVNLTDGLDGLVSGLSVIAFSAFGVIAFYQEQMDVAIFCFAIVGGMLGFL
                     LFNKNPAKIFMGDTGSLALGGSIAAISILVHQEWLLLLIGIIFVIETASVILQVFYFK
                     ATGGKRIFRMTPIHHHFELGGWSEWRVVLTFWGIGLIGAIISVCVVIF"
     gene            complement(4561..6036)
                     /locus_tag="U0308_000467"
     CDS             complement(4561..6036)
                     /locus_tag="U0308_000467"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEM2315481.1"
                     /translation="MKLNELMQAIPVFTGEASETIEISHIAQDSRKVKPGTLFICIDG
                     ELVDGHQFASRAVELGAVAIIAEKQLDVSIPVIYVRDSKRAMAMLADYFYGSPTQALK
                     LVGITGTNGKTTVSHLVEQIVRENGEQTGLIGTMYRKIGDQILETKNTTPDSLTLQET
                     FRDMLLSGVSTAVMEVSSHALVQGRVYGSDYDVAVFMNLSQDHLDYHHTMEEYANAKS
                     LLFAQLGNSYHTSNPKIAVLNADDEESVRMQKATAAHVITFGIKQQADFKASNIRITS
                     HGSTFDLRTPIGNFTLKIKMIGNFSVYNVLAAIATSFALHIPMEKAIKTVESIPGVKG
                     RFELVHAGQEFPVIVDYAHTPDGLLNVLETIAEFAEKRVFVVVGCGGDRDKGKRPQMA
                     KIAVDYATNPIFTSDNPRSENPRAIIEDMIQGVPYSDSYVVHENRRDAIRFAVNEAEA
                     GDVILIAGKGHEDYQVIGDEVIDFDDRVEARIAIEKKLGLA"
     gene            complement(6211..8466)
                     /locus_tag="U0308_000468"
     CDS             complement(6211..8466)
                     /locus_tag="U0308_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HEM2315482.1"
                     /translation="MKRRIGNMRRGALVLFIFFTILFLLVSGRFLYLQITGEANGVPL
                     AAKASKQHLKSSVLEAKRGSILDRKGEVLAEDTASYTVAAVVSDKLSKTTKNPMRVVD
                     EEKTARILAKYIPMDESDILDKLNEKGKYQVEFGAAGKNISTETKAKIDKENLPGIEF
                     TRQSERFYPNGTFATQLIGFAQQEEEKNTTVLEGKMGIESRYNDILTGKNGKIDYSTD
                     RMGYILPNSKNKVTEAKDGKDITLTLDKKIQTFLEDTMTTVDAKYKPKNMMAVVADPK
                     TGEILAISQRPSFNPADRSTITGNSSSIWQDLPVEYAYEPGSVMKIISLASAIDTNTY
                     NANEYYQSGSYKVGDIAIHDHNNGNGWGSITYREGVERSSNVAFAKLLNKMGTDTFKT
                     YLDKFGFGKKTGIALPNETSGKILYNYPIEKVTTVFGQGTTVSMMQMIQAASAIASDG
                     TMKEPYVVSSVKDPNTGEETDTKTKIAGKPISAETAKKTRDELKNVISGEHGTGKLYA
                     IPGYDVAGKTGTSQIPDPKTGKYMTGADNYIFSFLGMAPADNPELVIYVTMQQPQLSG
                     SQTGGEAVSEVFNPVMKNSLQYMNIKPGDAEKLASEKVPVLAGKTIDEAKKIVKDKGL
                     EPIIVGNGKKIVQQLPQANAEIMQGQKVILMTDGDMTAPDMVTWSKDDALKVSEITGI
                     PFEFSGNGYVKSQSVSAGSVINSETKMKITLAPPEEISAFNQNHDQDTAEKNKKATDI
                     QENAGIGDLLN"
     gene            complement(8463..8825)
                     /gene="ftsL"
                     /locus_tag="U0308_000469"
     CDS             complement(8463..8825)
                     /gene="ftsL"
                     /locus_tag="U0308_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEM2315483.1"
                     /translation="MSNVAYKSNLEPNRVHREAEQPKKQILKRGQMTLGEKVIITIAL
                     AIVLVVAFRIISVQAQIYTVNQEIQTKETKILEQQKSNEDLKVEVKDLGRYERILKIA
                     KEKGLKLDGDNVKVVDGQ"
     gene            complement(8842..9780)
                     /gene="rsmH"
                     /locus_tag="U0308_000470"
     CDS             complement(8842..9780)
                     /gene="rsmH"
                     /locus_tag="U0308_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEM2315484.1"
                     /translation="MFKHETVLLHETVDMLEVKPDGIYVDATLGGAGHSEYLLNKLNE
                     KGHLFAFDQDQTAINNAKIKLADYSDKVTFIKANFRDMKEALNERGIEAVDGILYDLG
                     VSSPQLDERERGFSYHQDAALDMRMDQEQELTAKIVVNEWSYQDLIRIFFQYGEEKFS
                     KQIAREIERRREVKPIETTGELVDIIKTAIPAPARRKGGHPGKRTFQAIRIAVNDELG
                     AVEDSLEKALTLLKPGGRISVITFHSLEDRITKHLFQEATKGPDLPPGLPVIPDEYKP
                     DFKLATRKPIVPSEEELEQNNRARSAKLRVIEKIIK"
     gene            complement(9793..10224)
                     /gene="mraZ"
                     /locus_tag="U0308_000471"
     CDS             complement(9793..10224)
                     /gene="mraZ"
                     /locus_tag="U0308_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEM2315485.1"
                     /translation="MFMGEYQHNIDIKGRLIVPAKFRELLGDNFVITRGLDKCLFAYP
                     QEEWKKLEEKLQTLPLTKKDARSFTRFFFSGASECELDKQGRINIPSNLLQYADLEKE
                     TVIIGVSSRIEIWSKSEWDDVFNEAEESFADLAENMIGFDI"
     gene            complement(10427..11674)
                     /locus_tag="U0308_000472"
     CDS             complement(10427..11674)
                     /locus_tag="U0308_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2315486.1"
                     /translation="MFRELHPNIRARILIQFLSKVIGSMIFPFMAIYFSREINSSVAG
                     FLLMINVLAQFLAGMYGGHLADIIGRKKLMVTGELLKVFAFLGMVLCNSPMFHSPWIT
                     FVMLLIIGVAQGLINPAGEAMLIDVSTPENRSFMYSVSYWANNLSIMIGIMVGGWFFV
                     DYLFPLLVVLFIMSFVTAWLTISLISETLQQKEMPHKGSYGLMGMLKNYGQVLHDYRF
                     LLYTIGGIAIMSIEFQRSNYISVRLAEDVKALLVHLGPLGNISLNGVQIVSVLTAVNT
                     LFIVLFTVPIARFVTKRAQQPIMYVGFTLFALGFAVCAFANNLTVLLLATMVLSIGEL
                     LYVPTRQTVLAAIVDDERRGAYMAFNGIIFQIGKMIGSVSLVFAPFIGKYGMGAFTIT
                     LGVLSIVFSAVALKSGWEKVLVK"
     gene            11791..13605
                     /locus_tag="U0308_000473"
     CDS             11791..13605
                     /locus_tag="U0308_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgrR family transcriptional regulator"
                     /protein_id="HEM2315487.1"
                     /translation="MDKDYFTMRAHLYNITTDLEVSFKLNDVANIWFCTTKNAKRKLQ
                     QYQAKKMLTYLPGLGRGNVSRIIFPKQLELEVLDVLEQSLAEDAFSDILFLLQLPIPK
                     SWFTSISTEIQQIFGLQVTENQQEVLRSIVRRKLTTLDPLQTSVSMEAFLITQISDSL
                     VKYDEEKKKIIPHIAHHWKVSDDFTEWTFYLRKSVLFHHGRMLDSEDVKHTLMRSMQT
                     ESVSFWQLQDIQSIHCPNKFTISIQLKKTDPFFIRYLCTANMAILPRDIIFDEYTWIS
                     TGPFRVAERNDERLVLEAFDGYFLERPILDRVEFWTAQTGNNLKTIPMQFTSVDYEEN
                     LAYVERRKPGVGVNFICFNTHRNGAPQHPAFREAIYHLIDCQKASEQHFENYGTVASN
                     YYPEKSLPPKKHPEKIATLLKKANYQGEKVIFGTTQHPTAVKESKWIQEQAVEFGINL
                     ERKIITHQEASYSNVPAKETDFMMMGEIPASDDEMAYLDFLNNPYLLPQQLFNQAIIK
                     ELTEKLDAFKTEKDASKRDALQTSIDSWLTENHYLIYLHHPEKSQSLHSMIKGIAENP
                     YGYFDLSKVWIEISPLKTLKPDYRQSHRGKAPHTITQK"
     gene            complement(13535..13921)
                     /locus_tag="U0308_000474"
     CDS             complement(13535..13921)
                     /locus_tag="U0308_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3397 domain-containing protein"
                     /protein_id="HEM2315488.1"
                     /translation="MFDWLTNSTAIIIILPVVVFILTMFFSSFKLKKSQRRIMLAADL
                     STIFLIIAVHFFMIVLFNRSFLLYILLFLFILGIVIVVTAAKKEGEIQFRKILRGYWR
                     LCFFIFALLYVALYLYGIVYSLVLMF"
     gene            complement(13914..14807)
                     /locus_tag="U0308_000475"
     CDS             complement(13914..14807)
                     /locus_tag="U0308_000475"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEM2315489.1"
                     /translation="MANQLKVGIIGAGAMGLLYAANFADTSELTLFTRRKEQSDLLNQ
                     KGLSLKDNSELKNIHIQATVITDIKKLSEQQLLIIAVKQYSLKSILPLLQSIPERVPL
                     LFIQNGAAHLDSMPLLGNKRTILLGISEHGAGREDDTTVIWRGHGRTKYSIYQGELSE
                     AVTKTLDSNPDFPVEKHASYLDIINEKLFINAVINPLTAVLQVQNGKLLENKEWHELL
                     KTIVKEIQTVLPVENALEKVEVICQVTATNFSSMALDRMDNRMTEIDGIVLPILEKGE
                     SLPTLHALYHLIKGLEGESDV"
     gene            complement(14957..15130)
                     /gene="rpmF"
                     /locus_tag="U0308_000476"
     CDS             complement(14957..15130)
                     /gene="rpmF"
                     /locus_tag="U0308_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEM2315490.1"
                     /translation="MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCP
                     ECGQYDGKDVANS"
     gene            complement(15221..15757)
                     /locus_tag="U0308_000477"
     CDS             complement(15221..15757)
                     /locus_tag="U0308_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEM2315491.1"
                     /translation="MKWSISQLKKYRDSNFTINEKADLKKFFQENNIDVRDASPVQVT
                     GELIVHPEEVTANLTMKGDWTLPCARTLEDVIYPYEVHATETFVKSKEQVLDESWHVM
                     EQDMVDLTPVVEELLLVEIPMQVFSEDALEMSNLPRGNEWEMKTEEGNLLEQIAKEPK
                     VDPRLAGLANFFDEKKED"
     gene            15887..17059
                     /locus_tag="U0308_000478"
     CDS             15887..17059
                     /locus_tag="U0308_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HEM2315492.1"
                     /translation="MKATGIVVEYNPFHNGHKLHLNKARELTQADVVIAVMSGSFVQR
                     GEPAILPKWERTRMALAAGVDMVVELPVSFATQHATIFAEEAVRILDAIHVDTLFFGS
                     EHGVAEDFTLAAKKVVENEARFDEAIQLALVDKKTSYARAYTEAFKKLFGQNLLDITK
                     PNNILGFHYALAAQKQNPSISLQTIPREHAGYHDEEANHDQIASATAIRKLILAGKLE
                     EASHYLPASSIAILRNYEGPFLSWTDYWSFLQYRLIQAGSEELEGIRGVSEGIQNRMQ
                     QAATKAQNFSDFIELTKTKRYSNARLQRTALQILLNARSQTSSPYIRILGMNKTGQQY
                     LSLHKKNISLPIITTVSKAPAGLLEEELRATNIYTLAKGLENYQAGDFHIPPILTL"
     gene            17141..19381
                     /locus_tag="U0308_000479"
     CDS             17141..19381
                     /locus_tag="U0308_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEM2315493.1"
                     /translation="MVQEYIRLRGARENNLQNISLDIPKRKITIFTGVSGSGKSSIVF
                     ETIATESQRQLNETYSAYLRNFLPKYTQPDADSIENLSTSVIIDQKRLGGNSRSTLGT
                     ITDINSILRLLFSRVGKPSIGTANLFSFNDPAGMCPDCHGVGQKVSVDLVKLLDPNKS
                     LKEGAILFPTFSVDSWYWNSYAYSGFFDVNKKIKDYTDEEYDMLLHGKDIKVFLETPM
                     GSMNATYEGLIPKFNRLYIQKEGEMSASTKKRVDKFTHIAPCTTCEGTRLSAQALSCT
                     INGANIADFTAMQLDELKATIASIDDPIAAPMVKSVTERLQHLIDIGLGYMTLDRQTA
                     SLSGGESQRVKMIRHLNSSLTDLLYIFDEPSIGLHPRDVHRLNELLVKLRDKGNTILV
                     VEHDPDVIKIADHIVDVGPHAGKHGGEIQFVGSYTDLLKSDTLTGKFLNRHLPINSKP
                     RQPKGFLTTEKSSRFNLKDIQANIPKEILTVVTGVAGSGKSTLIHSVFLKEYPDAIVI
                     DQSAAHANIRSNPATYTGIMDPIRKAFGKENDVSPSLFSYNSKGACENCKGLGFTTMD
                     LAFMDSIRTPCEVCHGKRFQDSVLQYKLNGKSISDVLELTVSEALDFFTDKKILKKIE
                     AMEEVGIGYVTLGQALSTLSGGECQRLKLANELHKKGSIYIMDEPTTGLHMSDIEHIL
                     TIIHSLVNKGNTVIVIEHNVDIIRNADWIIDLGPEGGSAGGQIIFEGAPLDLLENKQS
                     LTAKYL"
     gene            complement(19424..20464)
                     /locus_tag="U0308_000480"
     CDS             complement(19424..20464)
                     /locus_tag="U0308_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEM2315494.1"
                     /translation="MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTV
                     DDHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHELEKDSDIKYENESDEEYNVRQM
                     QMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAF
                     KSSQEFIDYIHSKKVGDTVKINYKHGDKNEQANIKLTAIDKKGTPGIGITLVDDEKIT
                     ADPTVKIDSEKIGGPSAGLMFSLEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGI
                     DQKVVAADKSGAKVFFAPNDPITDEMKKSDPSIESNYDTAVKTAKDIDSKMKIVPVKT
                     FQDAVDYLEKLQ"
     gene            complement(20483..20965)
                     /gene="coaD"
                     /locus_tag="U0308_000481"
     CDS             complement(20483..20965)
                     /gene="coaD"
                     /locus_tag="U0308_000481"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEM2315495.1"
                     /translation="MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKK
                     PLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQ
                     IASMNRTLNAEIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNEQVQAKFK
                     "
     gene            complement(20968..21525)
                     /gene="rsmD"
                     /locus_tag="U0308_000482"
     CDS             complement(20968..21525)
                     /gene="rsmD"
                     /locus_tag="U0308_000482"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEM2315496.1"
                     /translation="MRVIAGERKGHALKAVPGNNTRPTTDKVKESLFSIIGPFFDGDM
                     VLDLFAGSGGLGIEALSRGAERAVFIDQAALAIKTIRQNLEGCHFTERAEVYRNDAER
                     ALKLLHKNEWKFDLVFLDPPYKKQQLEKLLVTLEKLELVNENGRIICEHDKEAIMPDT
                     IGKFEKIKSVSYGITVLSIFEFQEA"
     gene            complement(21622..21903)
                     /locus_tag="U0308_000483"
     CDS             complement(21622..21903)
                     /locus_tag="U0308_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbG family protein"
                     /protein_id="HEM2315497.1"
                     /translation="MENDRQAIVVWMNHLKQVRSLKRFGNVHYVSRKLKYAVLYCDMA
                     EVEDISNKVSRFHYVKRVEMSFRPFLKTEYESKKEMMYEHKNEDVQISI"
     gene            complement(21934..22383)
                     /locus_tag="U0308_000484"
     CDS             complement(21934..22383)
                     /locus_tag="U0308_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HEM2315498.1"
                     /translation="MLATMENMALLDLSDELASMILNSEEAQNYKLAKEALLNDATSQ
                     KNIRQFIRIKEQYEEVQRFGRYHPDYKEVTRKTRAYKREVDMDQNVAAFRRAEMDLQS
                     LLDEISLLLASAVSENIKVPTGNPFFETKSACSTGGCGSGGGCGCSA"
     gene            complement(22431..23486)
                     /locus_tag="U0308_000485"
     CDS             complement(22431..23486)
                     /locus_tag="U0308_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEM2315499.1"
                     /translation="MKFIMRVAVLLIICLFIGYNTDLFFSKSVEKNTAEDTATKSNFP
                     DNKKTTNENPKQVQDSSSLARFINKNVSELKKEFGDPVRVDKTAYGYDNYIYSQPGTS
                     YMQVGVTKNIVQTIYALGQDLNVMPYTIGMSTEKVFTDANLQSEISFNYKDSYYKFEL
                     SEEDLNARPIVNIGSGVYAQLNFDKFKSKLISVRYLNKLSFVKMRPYELSYQGEIYEE
                     KLTPADWNAIDDASSKQVLEITNVIRDRYGIEEVAWDESVAKVAYGHSVDMKKNDYFD
                     HTSPTQGDLSKRLSKGDVKYTKAGENIAYNYVDSAAAVEGWLNSKGHRENLLDGSYTY
                     MGAGTYRKYYTQNFIIK"
     gene            complement(23634..24539)
                     /locus_tag="U0308_000486"
     CDS             complement(23634..24539)
                     /locus_tag="U0308_000486"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HEM2315500.1"
                     /translation="MNQIEKTGELSASRFTVRDFTELVKIGIVNSNTITAFTGMWLAF
                     QLNGISFIQNVDVIFFTIVGSALIVAASGAFNNVIDRDIDGIMERTKNRPTMTGKISG
                     KRALMVALVLGVVGTIMLFMTTWQAGVLGVIGVFLYVVVYSLYAKRKLVSNTVIGSFS
                     GAVPPLIGWFAVEPSFSIVPIMLFLVMFCWQPPHFYAIAIKRKEEYAAAGIPMLPVVK
                     GIERTKKSMFFWVILLTILPFFMFELGIVYVVLATLLNIGWLALSIYGFKMEDSIKWA
                     KWMFVYSLNYMTILFVAMVVISIFL"
     gene            24775..25692
                     /locus_tag="U0308_000487"
     CDS             24775..25692
                     /locus_tag="U0308_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme A synthase"
                     /protein_id="HEM2315501.1"
                     /translation="MKKFLKVWSVLTIICMTVVVFGGALVTKTGSADGCGNSWPLCNG
                     QLVRLTDVTPEKLIEFMHRMTTGISSIFVIVLAICAWIYMKNRRETKPLAIIAVLFLI
                     IQALMGMAAVVWGQNPYIMALHFGISIICYASIVLLALMIFEVDRKFDARNLVMGTKL
                     RINIYALTIYTYLAVYTGALVRHEKASMAVPVWPFENGHFIMPTSVQDYVQYFHRLAA
                     FILIVWLLYVTWLVFRDYRRYRVLTFSMVLSLVFIALQAVTGALSVYTGVNLYIALAH
                     SLIITMLFALLCYLCLLASRSKSNRLRIK"
     gene            25800..26543
                     /locus_tag="U0308_000488"
     CDS             25800..26543
                     /locus_tag="U0308_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEM2315502.1"
                     /translation="MDKTKRKMIYETFMLILIVLSLALLPYRNSFTFILNWIIWVIFT
                     LDYLVRLYRADNKWHYVKTHPFQLIAIIPFYGGFRAARIVSFVHLLSITAMGRRYIVP
                     IYSFFRSNGLNRFLMIFVLLVIIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIV
                     PVTPIGRILASIMMLFGIAFIGMITSTITNFFRAKKATTSSTQRASKITQLIADTPDL
                     TKEEIAVVEQFLALRKKELADENIKSDSE"
     gene            complement(26549..27190)
                     /locus_tag="U0308_000489"
     CDS             complement(26549..27190)
                     /locus_tag="U0308_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HEM2315503.1"
                     /translation="MERKIMHLAVGKPKELNLSNNKRMMTGIEKKLVQSASLTTTGFE
                     NDAPHNLKYHGGPDRTVCIYPYEHYAKWAAMFGEELQVTAFGENLITTNMLESSVQIG
                     DKFQIGETVIQITEARNPCSTIEKFNGIPNLYKAIHKTGLTGYLCRTITPGIIHATDE
                     IKQIHQESHGVTVAFCHDKVLHKNGTKEDLERILAVEALSERYRNQVEKQIKK"
     gene            complement(27209..27826)
                     /locus_tag="U0308_000490"
     CDS             complement(27209..27826)
                     /locus_tag="U0308_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1775 domain-containing protein"
                     /protein_id="HEM2315504.1"
                     /translation="MKKIISSIVVLLAVFIIPFQASAHVSVLPSESTVDSWETYTMKV
                     PSEKDVASKKIVLKVEKGVSFESYEPVPGWTTTVDKKNGTVTWQTEGNGIEKGQFQRF
                     SFIAKNPSEEGEIAWNAYQYYEDGSIVEWVGAEDSETPHATTKIVKESSKSATGSHGE
                     VVAGAENTAGDTSSTGDNTILLWTAVAISVIALITGILAILSRKK"
     gene            complement(27839..29464)
                     /locus_tag="U0308_000491"
     CDS             complement(27839..29464)
                     /locus_tag="U0308_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopC"
                     /protein_id="HEM2315505.1"
                     /translation="MKLLKRVSFFLIILYLLIVPVQHVSAHAYLENSNPADQSHIQTA
                     PEKVTLVFNEEIEADFPLIEVKDSSGKQVETGKTTVSKKNNHMVEASLPADLKADVYS
                     VSWRVVSADGHAVTGIISFKLGDTKATFQAAEVPSSGADLQISSIQKAVLYIGFSLFI
                     GVLLFGLGLYPRKEQLTEKISGRLKKVTWVALALLGVALFMQLFIQTSITTGVSISES
                     FGPSKLVAFLTTKTGYIWISELIVWLLLAIFTIMMFFKKKQWSWFALLTESALIGYLI
                     FAKAQNGHAAASADKIVSISADMLHMIAASVWVGGILVLLFVLPQTGKARAVWSRFAI
                     VAIIAVASILVSGLLMAVMNLGQMANLFTTNYGKILLFKIGLFLLMALLGLGHYIYIK
                     LKNQRLPFKTILMELIIGTIILVVASVLTNVQTPPPPAPKAFDETIAAEGEKAKINLR
                     VEPATVGQNQFIITFTSADGSAKTDFEQVTITTKSTKTDEKSTFQAKLANDTQYFAEG
                     LYINQTGKWEITVHGLTKDFTDINQTFTTNITQ"
     gene            29604..29795
                     /locus_tag="U0308_000492"
     CDS             29604..29795
                     /locus_tag="U0308_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315506.1"
                     /translation="MLRYIELFFMFAFVTLITMWIQALLAKWKPTILRSFWLRTLTFI
                     IIGYALMAPTLYIGSLLLK"
     gene            29857..30243
                     /gene="mscL"
                     /locus_tag="U0308_000493"
     CDS             29857..30243
                     /gene="mscL"
                     /locus_tag="U0308_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEM2315507.1"
                     /translation="MKKMLVEFRDFALKGNVLDLAVAVVIGAAFGKIVSSLVDNIIMP
                     LVGVLLGGLDFTDLSFKVGKSVIQYGAFIQSIVDFVIIAFAIFIFVKVLTSFIKKKEQ
                     TVEETPVPPTEEYLKEIRDLLKEQQK"
     gene            complement(30378..30770)
                     /locus_tag="U0308_000494"
     CDS             complement(30378..30770)
                     /locus_tag="U0308_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315508.1"
                     /translation="MNWTRISSIVIVGFTAIGAIYGGLSMVFMPSGGLLSLSTGLLDG
                     SPFVDYLVPGIFLFVFVGLFHLAALIYLLKKLPRTKEVMFAAAAVLAVWMIVQLLIIG
                     YVFILQIIFLVVAAVEMFLAIQLKKQQR"
     gene            complement(30815..31024)
                     /locus_tag="U0308_000495"
     CDS             complement(30815..31024)
                     /locus_tag="U0308_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315509.1"
                     /translation="MRENSIIGRIIAFCAICFAFFNPKTVTYWLGVRAESGPAWYLTT
                     VVACGIAVFVLIDLIKKIKRRKTAE"
     gene            complement(31175..32152)
                     /gene="bsh"
                     /locus_tag="U0308_000496"
     CDS             complement(31175..32152)
                     /gene="bsh"
                     /locus_tag="U0308_000496"
                     /EC_number="3.5.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choloylglycine hydrolase"
                     /protein_id="HEM2315510.1"
                     /translation="MCTSITYTTKDHYFGRNFDYELSYKEVVVVTPKNYPFHFRKVED
                     IEKHYALIGIAAVMENYPLYYDATNEKGLSMAGLNFSGNADYKDFAEGKDNVTPFEFI
                     PWILGQCATVKEARRLLQRINLVNISFSENLPLSPLHWLMADQNESIVVECVKDGLHI
                     YDNPVGVLTNNPTFDYQLFNLNNYRVLSSETPENNFSNEIDLDAYSRGMGGIGLPGDL
                     SSMSRFVKATFTKLNSVSGDSESESIGQFFHILGSVEQQKGLCDVGGEKYEHTIYSSC
                     CNIDKGIYYYRTYGNSQITGVDMHQEDLESKELAIYPLVNEQQLNIVNK"
     gene            complement(32407..34035)
                     /gene="groL"
                     /locus_tag="U0308_000497"
     CDS             complement(32407..34035)
                     /gene="groL"
                     /locus_tag="U0308_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465592.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEM2315511.1"
                     /translation="MAKDIKFSEDARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFG
                     SPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEG
                     LKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISSGDEEVGKLI
                     AEAMERVGNDGVITIEESKGFATELDVVEGMQFDRGYTSPYMVTDSDKMEAVLEKPYI
                     LITDKKINNIQEILPVLEQVVQQGRPMLIIAEDVEGEAQATLVLNKLRGTFNVVAVKA
                     PGFGDRRKAMLEDIAILTGGQVITEDLGLELKTATVDQLGTANKVVVTKDDTTIVEGA
                     GDSTQISARVNQIRAQMEETTSEFDREKLQERLAKLAGGVAVVKVGAATETELKERKL
                     RIEDALNSTRAAVEEGIVAGGGTALVSIYNKVAALEAEGDVETGINIVLRSLEEPVRQ
                     IAHNAGLEGSVIVERLKHEAVGVGFNAANGEWVNMIDAGIVDPTKVTRSALQNASSVA
                     ALLLTTEAVVADKPDENGPAAVPDMGMGGMGGMM"
     gene            complement(34069..34353)
                     /gene="groES"
                     /locus_tag="U0308_000498"
     CDS             complement(34069..34353)
                     /gene="groES"
                     /locus_tag="U0308_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEM2315512.1"
                     /translation="MLKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGS
                     GRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAITK"
     gene            34588..35274
                     /locus_tag="U0308_000499"
     CDS             34588..35274
                     /locus_tag="U0308_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM2315513.1"
                     /translation="MAKRYITIVLVYLLLLFSASVGIPIVQHILLSTTSLSAESAASY
                     GMVIWSIFSNLLSLAIIIPMLYRKPKENKIEIGEKTKPLLSIVWIVGGVIGLYVAQII
                     CSVIITMISGELSNSANTELLVDLTKAAPIFLIFISILGPILEELVFRKVFFGGLSNV
                     TNIHVAAVISSLFFGLLHGDISFLLTYFVIGLILCFLYTKTKRIVVSMGAHILMNTIV
                     LLLSLGIIGG"
     gene            35276..35473
                     /locus_tag="U0308_000500"
     CDS             35276..35473
                     /locus_tag="U0308_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4305 domain-containing protein"
                     /protein_id="HEM2315514.1"
                     /translation="MKNSLIKQSFLYFALGLVFVYFVVVRVADYGYDVLACILIIMTL
                     MDFGIGIGLIITGLKRRKKNL"
     gene            complement(35507..36154)
                     /locus_tag="U0308_000501"
     CDS             complement(35507..36154)
                     /locus_tag="U0308_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HEM2315515.1"
                     /translation="MMEETTKIPQATAKRLPLYHRYLKYLDESGKERVSSAELSEAVK
                     VDSATIRRDFSYFGALGKKGYGYNVSYILDFFSKTLSQDKQTNVALIGVGNLGTALLH
                     YNFMKNNNIKIVAAFDVDPAKVGSVQQDIPIYHLNDMEEIVRENGVEVVILTVPADEA
                     QVTVDRLIEADVKGILNFTPARISVPKQVRVHHIDLTTELQTLIYFLENYPAKTE"
     gene            36464..38416
                     /locus_tag="U0308_000502"
     CDS             36464..38416
                     /locus_tag="U0308_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM2315516.1"
                     /translation="MILLQVQQISKFFGAEVILDNIKLEVKTGDRIALVGRNGAGKST
                     LLKIIAGKMSYDGGTISKPKSVEIGYLAQNTGLESSKTIWDEMLSVFDSLRKMEADLR
                     KMELRLGEPELYNDPEKYQALMTDYDTLQHTFKESGGYTYEAEIRSVLNGLRFYPEDY
                     EVEIASLSGGQKTRLALAKLLLAKQDILVLDEPTNHLDIETLAWLETYLQNYHGSLLI
                     VSHDRYFLDKVVNQVYEISRTKIDHYKGNYSSFVNQKQAKLEQMWKEFDKQQKQIAKL
                     EDFVARNIVRASTTKRAQSRRKQLEKMDVLGRPQGDEKAAHFGFQFEKQTGKDVLMVD
                     QLSIGYAKDKRIASNLTFEMKRQDSLALVGPNGIGKSTLLKTLIRDIPALSGEFHFGA
                     GVKIGYYDQEQAKLTSNKTVLMELWDDYPELNEVNVRTTLGNFLFSDDDVLKNVQSLS
                     GGEKARLALAKLTLLEANVLILDEPTNHLDIESKEVLEAALIDFEGTILFVSHDRYFI
                     NRIASKIVELAPEKATVFLGDYDYYQEKLAEEKELARLDAEDRRKKGEQVEATSSVRK
                     LNYQEEKEQQKLLRQRKRKLEEVEKSMEATDKKIAELELQLTNPEVFQDHEKALEITQ
                     ELDAVKADGEKLMEEWEQISEELESM"
     gene            38441..39400
                     /locus_tag="U0308_000503"
     CDS             38441..39400
                     /locus_tag="U0308_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2315517.1"
                     /translation="MKKILIISSSIIVGLLVIITICASFYLYSYALARDNSSMNDTAT
                     TDETTATAKLAKKNREENVAWMEKQNLTQWTETSADDLKLVATYLAADKPSNTTIILA
                     HGYRGKSGKVEMAGLARMYHEKFGYNVLMPDARAHGKSEGENIGFGWPERKDYVQWID
                     QVIDKNGTDTQIALHGVSMGSSTVLMTSGEKLPKQVKSIIADCGYTSMDAELSYQLKA
                     MFHLPKFPIIPTASLINKFKEGFFFSEASAVDAVAKTDVPIFYIHGDADAFVPTNMVD
                     ELYKATNSYKEKWIVKGAEHGQAFTVDPKTYEEKVRQFLNKTM"
     gene            complement(39945..40967)
                     /gene="tsaD"
                     /locus_tag="U0308_000504"
     CDS             complement(39945..40967)
                     /gene="tsaD"
                     /locus_tag="U0308_000504"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465599.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEM2315518.1"
                     /translation="MKKNTLILGIESSCDETAASVVKNGNEIISSVVASQIESHKRFG
                     GVVPEIASRHHVEQITLVIEEALKQANVTMDDLDGIAVTEGPGLVGALLIGVNAAKTL
                     AFMHNLPLVGVHHIAGHIYANCFETEFKFPLLSLVVSGGHTELVLMKADNEFEIIGET
                     RDDAAGEAYDKVARTLGLAYPGGVQIDKLAKDGEDTFHFPRAMMDEGSFDFSFSGLKS
                     SFINTLHNLRQRGEEPNPNDMAASFQASVVDVLVSKTIRAAKQYDVKQLLLAGGVAAN
                     QGLRERLIQEVKLELPETELIIPPLALCGDNAAMIAAAGTVSFLQGKRSGFDMNANPG
                     LLLEDI"
     gene            complement(40964..41419)
                     /gene="rimI"
                     /locus_tag="U0308_000505"
     CDS             complement(40964..41419)
                     /gene="rimI"
                     /locus_tag="U0308_000505"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEM2315519.1"
                     /translation="MSLDEALLFREATVTDLKSIMNVENAAFTVPWTEAAFRNEFIIN
                     QYAYYLLAIYKEQVVGYAGVWLVLDEGHITNIAIHPDYQGNHYGEALLREMIRVAKER
                     GVVRMTLEVRVSNDVAQGLYKKLGFQDGAIRKNYYPDTKEDALVMWVDL"
     gene            complement(41416..42108)
                     /gene="tsaB"
                     /locus_tag="U0308_000506"
     CDS             complement(41416..42108)
                     /gene="tsaB"
                     /locus_tag="U0308_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEM2315520.1"
                     /translation="MILGMDTSSDTMAIALFNEGVVIGEYTTNLKKNHSVRLLPAIAV
                     LMEECGVKPTDLEKIAVAKGPGSYTGLRIGVTVAKTMAWDAGIPIVGISSLALLAENG
                     LYFPGKVVALMDARRSNVYAGVYQASEGEMQSVIADGHIALTELLEQFLSSEEPILFV
                     GTLTEQICVTVTEVLGERAVFAQADYTYSRASSLVKLAENLDGEPADNFVPDYLKLAE
                     AESKWLESRGSE"
     gene            complement(42105..42566)
                     /gene="tsaE"
                     /locus_tag="U0308_000507"
     CDS             complement(42105..42566)
                     /gene="tsaE"
                     /locus_tag="U0308_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEM2315521.1"
                     /translation="MEFELIMTSERETRLRAKQLGEQLTAGDVILLEGDLGAGKTTFT
                     KGLGEGLLIPQMIKSPTFTIIREYKKGRLPLYHMDVYRLEDASADELGLEEYFYGAGV
                     SVVEWAQFVREDLPEEYLEIQLFHIDENTRKLVVKPVGERYEQLAMEVFGK"
     gene            complement(42671..43816)
                     /locus_tag="U0308_000508"
     CDS             complement(42671..43816)
                     /locus_tag="U0308_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315522.1"
                     /translation="MMKKGILLSILLALVLVISACGESAEEKAAKTPQGKFVQTMKNG
                     MNVPDQSTYTTSFAVNDINVSSTDPSAQTMGILKDIKLSVTTSTDKKANKSEAKFNVT
                     STNNLLPISMDLDFLVDSKTGNAYIPLKTIVEPDASLLSYLDQATGGMWSKINTDYPD
                     LKNKYLSTEELTSSLTDQPEAKTAVDTKEIEAATKDLNKKAIKLVDTYFTGLEKDRFK
                     EADDGTVSVTIKNADIANLMNQVAKLMDDEKVKADLKVIAESQGSDAVTDFDSTYTEM
                     KSSLTDAAKELKENKTYLINNKLTVKSGKENSLDTLTLQTKIEDKSDASAPESISFTV
                     KTKAEEFVPIEDFPTKDEVISSEELNKIITDVTAKMYGGMDISGTNY"
     gene            complement(43950..44330)
                     /locus_tag="U0308_000509"
     CDS             complement(43950..44330)
                     /locus_tag="U0308_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315523.1"
                     /translation="MTGFKKVILPVLLVVLFLAGCNQAEVPALVLDGTVTDTSLLENN
                     NELTVNGTLTWSGEKNNYASEVLITVSSNTAVTNATTGKAMKLADIKEEDTVRAVFPQ
                     GSNITSPAPGKVSENATSLKVTPK"
     gene            complement(44425..44781)
                     /gene="crcB"
                     /locus_tag="U0308_000510"
     CDS             complement(44425..44781)
                     /gene="crcB"
                     /locus_tag="U0308_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEM2315524.1"
                     /translation="MLVNFVLVGFGAALGAMLRYGISVLVKSKWKTNFPFATFFINIT
                     GSFLLGFLVSSALGPVWQLFLGTGFMGGYTTFSTFKVESMELKWKTNYRVLFSYLGCT
                     YVFGLIAAFLGLMLGV"
     gene            complement(44771..45160)
                     /gene="crcB"
                     /locus_tag="U0308_000511"
     CDS             complement(44771..45160)
                     /gene="crcB"
                     /locus_tag="U0308_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012951875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEM2315525.1"
                     /translation="MYFLYVGVFGALGGMCRYAMNLWLGGGDFPSATLAVNLIGCFLL
                     AFLMQFLAEKSRISLVILNGIGTGFIGAFTTFSAFSVDTIQLVQSGAWLFAVSYVLAS
                     FIGGLIMVKFGRMLSNKLLNRGEHRVS"
     gene            complement(45266..45892)
                     /locus_tag="U0308_000512"
     CDS             complement(45266..45892)
                     /locus_tag="U0308_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HEM2315526.1"
                     /translation="MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGE
                     AYQKAVQSLYAIAYTIKMSKMGETRLDGYTDFVVPPLEGFWWSEERFDLKDRDAWLWT
                     SILRQPDFVTEEVLEWAKEVAKKKKPDLDTSHVKLVRFEEGECVQMMHIGPFSEEVKT
                     VAEMHQFMETEGLHNDTGAVRKHHEIYLSDPRKVDPEKMKTILRLPVS"
     gene            complement(45889..46782)
                     /locus_tag="U0308_000513"
     CDS             complement(45889..46782)
                     /locus_tag="U0308_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEM2315527.1"
                     /translation="MDVTQLKMLHNAKVISEINKGFSVDRKYQVDETYLVRVFPIDLL
                     QEREQEFKIIQALDSQTPFVPKAYDFGFIEREGYMIISYLRGEDAEIGMTRLSHSEQL
                     KAGFSAGEILREVHKIPLAIPKMNWLDFQTVKFERKVKELKELEITASFLTDTEKFVN
                     ENIARLKNRPICLQHGDFHPANIILNNKKFVGLIDFNRLEFGDPLFDLAKIGFFTTEV
                     SIPFARGNILGYIDKEEVTDFWNLYALYTAMHITSAVNWAAKNESRNFKKLMDYAAKT
                     VASHDNFQRIVPNWMNEEEFK"
BASE COUNT        13791 a         9800 c         8159 g        15165 t
ORIGIN      
        1 aagcgaacaa gtgttggcat ctcctgactt gaggtcatcg ttttgttacc tttttgaaac
       61 atctgttatc tataaatttg ccaaaaattg gcgagaagaa aaaaatatta ttcatttgtt
      121 tctttcttct ctttagctgc ttcttcggct gcctttttct cggcattctg ttggtaataa
      181 ctttggaaat aagaacctac ttcaatatca ataactcctt tttgtccttt agcaagttga
      241 gcgacaatgg ctggataatg ttgcattttc tcagcgaaag tactaatatc tgcggaaacc
      301 tgattcccgt cgttcatata taatttaata tggtttttat cagttttagt tggactataa
      361 atcacttccg agatagaact aacaacatct tttggtaact tattaatttg tgctaccatt
      421 ttctcaagtg ttttaccgtt tttaaagttt tgaaatagca aatcatttcc aattgggaat
      481 tgtcttggtt gatccgttaa catgatgcca ctttctagca catcatagta tttaccatct
      541 tgttgttgat agcctatcgt tttaaattcg gtgatattaa tttgaacatc atttatccct
      601 tctttagaaa cggtagcatc tttaataagg gtattttttt tgagggtatc ctcagttttt
      661 ccattactta tcccgatgac aaactcacca atttcgagtc cactttcttt tcttacttca
      721 ttctctgtaa gttgcttatt gccacttaca gcaattttat ctaatttact gagtggggag
      781 aggaaataga gggtaatggc gatcaaaatc acaaaaattc cgattaaaat ggctaagtgt
      841 cttactaatt tttttttgcg gtattttttg agttctggta tgcgattttc aattgaaatt
      901 actcgtttat tttcagccat tttattcgct cctttctgcg atttatttca taatgctaag
      961 gactgcttct actaatttcg ctgctgcatc tgggcgcccc atttgtttag cacttagctt
     1021 cataccattt aatttcgcct cgtcattcaa aatcgaatca actgtcgcca ttaaatcggt
     1081 attttttaat tctgcttctg taattacgat agctgcatta tttttttcta aagcgcgagc
     1141 gttattttct tggtggtttg ctgtcacgta tggactaggt atcaaaatac ttggaacccc
     1201 tagcgctgta agttctgcaa gtgtagtcgc tcctgctctt gaaacaacga gcgtcacagc
     1261 gtttaaaatt tttggcatat cataaataaa tggttgaaca ctaatatgat tacccaaatt
     1321 caactccgcc aaagaatctt ttattctttc atagtgtaca tcgcccgtta cataaagtag
     1381 ctgaaaatcc cgattattcc attctggcaa aatagcttct accgcttcat tcacgccgcg
     1441 agctcctcta ctgcctccaa aaacaagcac agttggcttc cctgaaacta gtccgtaagt
     1501 ttccagtgca ccttccgagt ccacacctac aacttcagaa gcacgtggat taccagtgaa
     1561 aacgattttt tccgatgcga aagaatcact tacttcttca aaacaaatgg ctactttatc
     1621 tgtgtagcgg cttaaaaatt tattcgttaa tccagcaaca ctattttgtt cgtggattaa
     1681 agtaggaatt ttaagttttg cggctgcata aacgactgga ccacaaacat aaccacctgt
     1741 tccgataacg acatccggtt taaaatcgcg caaaatttgt ttactttttt tcgcgccgct
     1801 cagaaaacgc attactgttt taatattttc taacgataat gaacgtttga aaccagtaat
     1861 ttcaatagct tcaaacggaa tcccttcacg tttaacgatt ccagcttcta ggcctttttc
     1921 tgttccgata tataaaaatt ccgcttcagg atgaattttt tttaattctc tgatgagagc
     1981 aagcgctgga taaacgtgtc caccagtacc gccaccactt attgctactt tcatttttcc
     2041 acctcttcta ttagctcgcc gattgcgtcc atataggcat tcccgcgaac ttcaaatgtt
     2101 cggtattgat cccaactcgc acatgctggt gaaagtaaga taatatctcc tggtgctgat
     2161 tcgcggtacg caactggaac agctgcctcg acattatcca cgtaatgtac gtcaatgcca
     2221 gcgattttcc caacgcggcc aattttatct gctgtttcgc caaagacaat taacgctttt
     2281 acatttttga aaaatggtag taattcgtca aatgaattac cacggtccaa cccaccagcc
     2341 agtaacacga ctggattttt aaaccctttt aatgcacttt gagttgctag aatattcgtt
     2401 gcttttgaat cgttatagaa tttacgacct tgccattcta caacaaattg tgtccggtgc
     2461 tctacacctt taaacgtttc taatacgtgc atgatttctt catttgtaac acctaacgtt
     2521 tttgctactg ctacggaagc aagcacattt tctaaattat gctctcctgg aagtaaaata
     2581 ttgtcacgtg cgccaatcac ttcatcgttg aacataatat tgccattttg cacgtagctt
     2641 ccttgaccaa ggcgttgtgt ggttgaaaac ggaataactt gtgcttttgt ttgttttgtt
     2701 aggtttttaa gctcttcttg atcccaatta attactagga aatcatctgc tgtttgattt
     2761 ttttggatat gccattttgc ttgaacgtat tcactacggt ctgtatggta atctaaatgc
     2821 gcttcataaa tattcgtgat gacggaaata tgcggtttaa atgtttctac gcccattaat
     2881 tggaacgaag atagctccat cgaaatgtat tgatcactgg tcgcattttc tgcaactgcg
     2941 gatgccggaa aaccgatgtt tcctgcgagt aaagaactat tttctttgtg cgcatttaac
     3001 atatggtgga tgattgtggt tgttgtcgtt ttaccatttg ttcctgtaat accaacaatt
     3061 ggtgcttcag atatttggta agctaattcg acttccgtaa tgactggaat tttgagtttt
     3121 aacgcttttt caatcattgg gttgttgtac ggaattccag gattttttat gacaagttca
     3181 aatccttcat ctaaaagttc aattgggtgc gaaccgcaaa taactttaat accttgctca
     3241 agtaaacctt gtgcttctgg attctcgcta aaaggttttt gatcattaac agttacaaat
     3301 gctcccagtt tgtgcataat tgttgccgcg ctaacaccac ttcttgcaag acccaagaca
     3361 agtacttttt tgtgatggta catttcaatt tttttcattt cctttggttc ccccatttat
     3421 atcaaaattg gcggtcgaat ttatgatttt cacaaaaacg acggaaagcg ccaaccagat
     3481 tctgtaaaaa aacagctaac tagagacgct tttgccgtaa aaagattacg gcgcattatt
     3541 taaaaaatga ctacacagac agaaataatt gctccgatta acccgattcc ccagaacgtt
     3601 aaaacaacac gccattcgga ccagccacca agttcaaagt gatgatgaat tggtgtcata
     3661 cggaagattc gttttcctcc agttgcctta aaataaaata cttgcaatat aacagatgct
     3721 gtttcaataa cgaaaataat tccgattaag agtaacagcc attcttgatg tactaaaata
     3781 gaaattgcgg cgatacttcc accgagtgca agcgaaccag tatctcccat gaagattttc
     3841 gctggatttt tattaaatag tagaaatcca agcataccgc ccacaatcgc aaaacagaaa
     3901 atcgcgacat ccatttgttc ttggtaaaat gcaatgacac caaaagcaga aaaagcaatg
     3961 acagaaaggc cagagacaag accatctaaa ccatctgtta aattaactgc attagagaaa
     4021 ccaactaacc agaacaaaat aaagataaca aagaaccaac caagatccac ttctatattt
     4081 gtaaacggaa tattaagcgt ctcagcaaaa ccatttaaat gatataccag atagaataaa
     4141 atcgaaattg ccacttgacc taaaaacttc tgctttgaag taaggcctag attacgtttt
     4201 tgaactactt tgatatagtc atctaggaaa cctaatgcgc caaatagtgc cagcgcgatg
     4261 aatagcagcc acgtagctgc actaacttca ccactgatga acgaaaagat caagaaacta
     4321 ataagcattg cagtaatgaa aacaactgcc cccattgtcg gtgtccctga tttcttttca
     4381 tgcattttcg gaccttcatc tctaatactt tggccgaatt ttaatttcac caagaatggt
     4441 ataaatagtg gtacacctat caccgtaatg ataaaagcaa ctgcaaatgt tgatactaac
     4501 atgtataaag acacaataaa ttctccccaa tctgtttgtc aaagcacttc acttcatatt
     4561 ttatgcgagt ccaagttttt tttcaatagc tattcgggct tctactcggt catcaaaatc
     4621 aataacctcg tcaccaatca cttgataatc ttcatgacct tttccagcaa tcagaataac
     4681 atcccctgct tctgcttcat ttactgcaaa acgaatcgca tctcggcggt tttcgtgaac
     4741 cacataagaa tcactatatg gaacaccttg aatcatatct tcaataatcg cacgcggatt
     4801 ttcactccgc ggattatctg atgtaaaaat aggatttgtt gcataatcta cagcgatttt
     4861 tgccatttgt ggacgttttc ctttatcacg gtccccgcca caaccaacaa cgacaaaaac
     4921 gcgtttttct gcaaactcag caattgtttc taatacattt agcaagccgt ctggagtatg
     4981 ggcgtaatca actataacag ggaactcttg ccctgcatgc acaagttcaa aacggccttt
     5041 gacacccggt atgctttcca ctgttttaat tgctttttcc atagggatat gtagcgcaaa
     5101 gctagttgca atcgcagcca atacgttata aacactaaag tttccaatca tttttatttt
     5161 caatgtaaaa ttaccaattg gtgtccgtaa atcaaatgta gaaccatggc tagtaattct
     5221 gatattactt gctttgaagt cagcttgttg ttttatccca aaagtgatta catgagcagc
     5281 tgttgctttt tgcatacgca cgctttcctc gtcatccgcg tttaacacag caatttttgg
     5341 gttacttgta tggtagctgt tgcctagttg cgcaaacaat aagctttttg cattggcgta
     5401 ttcttccatt gtatgatgat aatccaaatg atcttgagac aaattcataa atacagcaac
     5461 atcgtaatct gaaccatata cgcgaccttg aacgagtgca tgcgaggata cttccatcac
     5521 agctgtgctc actccactaa gtaacatgtc ccggaatgtt tcttgtaaag tgaggctatc
     5581 tggcgttgta ttttttgttt ctaaaatttg gtcgccaatt ttgcgataca tcgtgccaat
     5641 caaacctgtt tgctcgccat tttcgcgcac gatttgttcc actaagtggc tcacggtcgt
     5701 cttcccattt gtcccagtaa tcccaacgag ctttaatgct tgggttggag atccataaaa
     5761 gtaatcggct aacatcgcca tagcacgttt tgaatctctt acataaatga caggaataga
     5821 tacatctaat tgtttttccg cgataattgc taccgctcct agttctactg cacgtgatgc
     5881 aaattgatgt ccatccacca attctccatc tatacaaata aacaacgtcc ctggttttac
     5941 ttttctacta tcttgggcga tatggctaat ttcaattgtt tcacttgcct cgccagtaaa
     6001 aaccgggata gcttgcatta gttcatttaa cttcattctt gccatctcct caaacttatt
     6061 ctttctgtta tttttgctaa aaccaaaaag aatccttttc tatcttagca aaaacaacaa
     6121 actatatcta ccacgacaaa agacacagat tgcatttaaa gttagaagta tgccactttg
     6181 taaagctgac atacttctat cttcctatta ttaattgagc aaatcaccga taccggcatt
     6241 ctcttggatg tcagttgctt ttttattttt ttctgctgta tcttgatcgt gattttgatt
     6301 aaatgcactt atttcttctg gtggcgcgag ggttattttc attttcgttt cactattaat
     6361 tacgctaccc gcagatacac tttggctctt cacgtaacca tttccactaa actcaaacgg
     6421 aataccagtt atttcagaaa cttttagcgc atcgtctttc gaccaagtta ccatgtcagg
     6481 ggcagtcatg tcaccatctg tcattaaaat aactttttga ccttgcatga tttcggcgtt
     6541 cgcttgcgga agttgttgga caattttttt gccgttgccg actataattg gttctaatcc
     6601 tttatctttc actatttttt tagcttcatc tattgttttc cctgctaaga ctggtacttt
     6661 ttcggaagct agtttttctg catcgcctgg tttgatgttc atatattgta gactgttttt
     6721 cattacagga ttaaaaactt ctgagactgc ttctccgcca gtctgactgc cggacaattg
     6781 tggttgttgc attgtcacat agattactaa ctccggatta tccgctggtg ccattcctaa
     6841 gaaagagaat atataattat ctgctccagt catatactta ccagttttcg gatctggaat
     6901 ttgtgatgta ccggttttac cagctacatc gtatcccgga atcgcatata atttaccagt
     6961 accatgttcg ccgctaataa cgttttttaa ttcgtcacgc gttttcttcg ctgtttctgc
     7021 actaattggt tttccagcaa tttttgtttt agtatcggtt tcttcgcctg tgtttggatc
     7081 tttgacactt gaaacaacat atggctcttt catcgtgcca tcacttgcga tagccgaagc
     7141 agcttgaatc atttgcatca ttgaaacggt tgttccttgg ccgaaaacgg ttgttacttt
     7201 ctcaattgga tagttatata aaattttccc gcttgtttca ttaggtaaag caatacctgt
     7261 tttcttacca aaaccaaatt tgtctaaata tgttttaaac gtatcggtcc ccattttgtt
     7321 taaaagtttg gcaaatgcaa cgttactaga gcgttctacc ccttcacggt acgtaataga
     7381 cccccaacca ttaccgttat tatggtcatg aattgcgata tctcctactt tgtatgaacc
     7441 cgattgataa tattcattgg cattatatgt gttcgtatca atagcagatg caagagaaat
     7501 aattttcatt accgaacctg gctcataagc atactcaaca ggtaaatctt gccaaatact
     7561 ggagctgttt ccagtaatag tagatcgatc agcagggttg aaagaaggac gttgactaat
     7621 agccaaaatt tcacctgttt tcggatcagc tacaactgcc atcatgtttt taggtttgta
     7681 ctttgcatcc acagttgtca tcgtatcttc taaaaaggtt tgaatttttt tatctagcgt
     7741 tagcgtaata tctttgccgt cttttgcttc cgttactttg tttttagagt taggcaaaat
     7801 atagcccatt ctgtctgtac tgtaatcaat tttgccattc ttgcctgtca aaatatcatt
     7861 gtaacgggat tcaataccca ttttaccttc taaaactgta gtattctttt cttcttcttg
     7921 ttgggcgaaa ccaattaatt gtgttgcaaa cgttccatta ggatagaaac gttctgattg
     7981 acgagtaaat tcaatacctg gtaaattttc tttgtcaatt tttgcttttg tttctgtaga
     8041 aatattttta ccggcagcgc cgaattcgac ttggtatttt cctttttcat tgagtttatc
     8101 tagaatatca gattcatcca taggaatata cttggcaaga attcgagccg ttttttcttc
     8161 gtcaacaaca cgcattggat ttttcgttgt tttggaaagt ttatcgctaa ctactgctgc
     8221 aaccgtgtaa gaagccgtat cctccgctag cacttctcct ttacgatcta aaatggagcc
     8281 acgctttgct tcgagaacac tgcttttcaa atgttgttta gatgcttttg ctgcaagagg
     8341 taccccattt gcttctcccg taatttgcaa ataaagaaaa cggccagaaa ccaagagaaa
     8401 gagaattgtg aaaaagataa aaagcacaag agctcccctt ctcatgttac ctatacgccg
     8461 tttcattgac catctaccac tttcacatta tcgccatcaa gttttagccc tttttcttta
     8521 gcgattttca aaatacgttc atatctccct aaatctttta cttctacttt taagtcttca
     8581 tttgattttt gttgttcgag aattttggtt tcttttgttt gaatttcttg gttcactgtg
     8641 taaatttgcg cttgtacgct aattatacga aaagcaacaa ctaaaacaat cgcaagcgca
     8701 atcgtgatga ttactttttc tccaagtgtc atttgaccac gttttaggat ttgtttttta
     8761 ggttgttccg cttctctatg tactctattt ggctcgagat ttgatttata ggcgacattg
     8821 ctcacatttt ttcaactcct gctatttgat aattttttca atcacgcgta attttgctga
     8881 acgcgctcgg ttattttgtt ccagttcttc ttcacttggt acgattggtt ttcttgtcgc
     8941 aagtttgaaa tctggtttat attcatctgg aatgacagga agacctggtg gtaaatctgg
     9001 tccttttgtc gcttcttgga ataagtgttt tgtaatgcgg tcttctaaag aatgaaacgt
     9061 aattacgcta attctgccgc ctggttttaa taaagttaag gctttttcaa gcgaatcttc
     9121 tactgcaccg agttcgtcgt taacggcaat tcggatggct tgaaaagtgc gtttccctgg
     9181 atgtccgcct tttcttcttg ctggagccgg gatagctgtt ttgataatat ctactagttc
     9241 gcctgttgtt tcaattggct ttacttcacg acgacgttcg atttcacgag caatttgttt
     9301 cgaaaatttt tcttcgccat attggaaaaa gatacggatt aaatcttgat aagaccattc
     9361 gttaacaact atttttgctg tcaattcttg ttcttgatcc attcgcatat ccagtgcagc
     9421 gtcttggtga taactaaaac cacgttctct ctcgtctagt tgtggggatg aaacgcctaa
     9481 atcatacaaa atcccatcaa ccgcttcgat accacgctca tttaatgctt ctttcatatc
     9541 gcgaaaattg gctttaataa aagtcacttt atcgctataa tctgctagtt taatttttgc
     9601 attattaatt gctgtttgat cttggtcaaa tgcaaataaa tgcccttttt cattaagctt
     9661 atttagtaaa tactcggagt gacctgcgcc gccaagtgtt gcatcgacat agattccgtc
     9721 tggttttact tcaagcatat cgactgtttc atgtagtaat acggtttcgt gtttaaacat
     9781 gcgtttaccc ccttaaatat caaagccaat catattttcg gctaaatcag caaaagattc
     9841 ttctgcctcg ttaaagacat catcccactc tgatttactc caaatttcaa tacgactaga
     9901 aaccccgata ataactgttt ctttttccaa atccgcatac tgtagtaagt tggatggaat
     9961 attaatccgg ccttgtttgt ctagttcaca ttcagacgca ccggaaaaga agaaacgtgt
    10021 aaaggaacga gcatctttct tagtaagtgg taaggtttgg agcttttctt caagcttttt
    10081 ccattcctct tgtggataag caaataaaca cttatcaagt cctcgggtta taacaaaatt
    10141 atcccccaaa agctcacgga atttagctgg cacaattaat ctgcccttta tatcgatgtt
    10201 gtgttgatat tctcccatga acattagact tcacccactt tcatacatac cactttacca
    10261 catctcccca cttcgcacca ccaaaaacct aaaaaagtgt aaaaaaaaat catcccagcc
    10321 aaagcacaga atgatcaatc ccttatttaa agccattttc atctaattca attcttaaaa
    10381 aacaatgtgg ggcttggtgg agggattccc cactttgaac caacatttat tttaccaaca
    10441 ctttttccca accagatttt agtgccactg ctgagaacac tatacttaaa acaccaagcg
    10501 taatcgtaaa agctcccatg ccatatttac caataaatgg tgcaaatact aaacttacag
    10561 aaccaatcat tttaccaatt tgaaaaataa taccattaaa tgccatgtag gccccacgtc
    10621 tttcatcatc tactattgcc gctaagaccg tttgacgtgt tggtacatag agtaattcac
    10681 caattgagag caccatcgtc gccaaaagta aaactgttag attatttgcg aaagcacaaa
    10741 ctgcaaatcc aagcgcaaac aaagtaaacc ctacatacat aataggttgc tgcgcccttt
    10801 tagtcacaaa tctcgcaatt ggtacggtaa aaagtacaat aaataaagta ttcacagcgg
    10861 ttaacacact cactatttgt actccattga gagaaatatt tccaagtggc cccaaatgta
    10921 caagtagcgc tttcacatct tctgctaaac gaaccgaaat gtagttgctc cgttgaaact
    10981 cgatcgacat gatagcaatt ccaccaatag tatatagaag aaaacgataa tcatgtaata
    11041 cttgtccata atttttaagc attcccatta gtccatatga ccctttgtgc ggcatttctt
    11101 tttgctgcaa cgtctcggaa attaagctta tagtaagcca tgccgtaaca aatgacatga
    11161 taaaaagaac aactaataga ggaaacagat aatctacaaa aaaccaaccc cccaccataa
    11221 ttccaatcat gatcgataaa ttattcgccc aataactgac cgaatacata aatgaacggt
    11281 tctctggggt acttacatca attaacattg cttctccagc tggattaatc aatccctgag
    11341 ctaccccaat aataagtaac atgacaaaag ttatccacgg agaatgaaac atgggggaat
    11401 tgcatagtac catcccgaga aacgcaaaca ctttaagcag ttctccggtg accattaatt
    11461 ttttacgtcc aataatatcc gctagatgtc caccgtacat gccagcaaga aattgtgcta
    11521 atacattaat catcaagaga aagccggcga cactactatt aatttccctt gaaaaataaa
    11581 ttgccataaa aggaaaaatc atcgaaccaa ttactttact caaaaactga attaatatcc
    11641 gcgcacgaat atttgggtgc aactctctaa acatgacatc ccctccattt gcaatttttc
    11701 tgacttctct gctagtataa aagggataca taaatttaaa aagggtattc attttcatat
    11761 attgtcccct tttaggacgg agctgttgtt atggataaag attatttcac tatgcgcgcg
    11821 catttataca atataactac cgatttagaa gtgtctttca aattaaatga tgtggcaaat
    11881 atttggtttt gtacgactaa aaatgccaag cgtaaactgc aacaatatca ggcgaaaaaa
    11941 atgcttactt atcttcctgg gctaggccga ggaaatgttt caaggattat ttttcctaaa
    12001 cagttagaac tagaggttct tgacgttttg gaacaaagtt tggctgaaga tgcatttagc
    12061 gatattttat ttttgctaca attgcctatc cctaaaagct ggtttacaag tatctctacg
    12121 gaaattcaac aaatattcgg tttgcaagta acagaaaatc aacaagaagt tctgcgctcc
    12181 atcgttcgtc gcaagctcac taccttagac ccacttcaaa cttctgtatc tatggaagca
    12241 tttctcatca cccaaattag tgactctctc gtcaaatatg atgaagagaa aaagaaaatt
    12301 atacctcata ttgcacacca ctggaaagta tctgatgatt ttacggaatg gacattttat
    12361 ttacgaaaaa gtgttttatt tcatcacgga cgcatgctgg atagcgagga tgtaaagcac
    12421 accttgatgc gttctatgca aacagaatcg gtttctttct ggcaattaca ggatattcaa
    12481 tccatccact gccctaataa attcacgatc tccattcagc taaaaaaaac ggaccctttt
    12541 ttcattcgtt atttatgcac agcgaatatg gctattttac cgcgagatat tatttttgat
    12601 gaatatacat ggatttctac tggtcccttt cgagttgcag agcggaatga cgagcgcttg
    12661 gtcttagaag cctttgatgg atattttctc gagagaccga ttcttgatcg agtagaattt
    12721 tggaccgccc aaactggaaa caatttaaaa accattccaa tgcaattcac ttccgttgat
    12781 tacgaggaaa atctcgccta tgtagaacgt cgtaaacctg gtgttggtgt taattttatt
    12841 tgtttcaata cgcaccgaaa tggcgcccca caacacccgg catttcgaga ggcaatctac
    12901 catctcattg attgtcaaaa agcaagtgaa caacatttcg aaaactatgg gacagtcgca
    12961 tctaactatt atcctgaaaa atcccttcca cctaaaaaac atcctgagaa aatcgctact
    13021 ttattaaaaa aagcaaacta ccaaggcgaa aaagttattt ttggaactac ccaacatcct
    13081 accgctgtaa aagagtcaaa atggattcaa gagcaagctg tcgaattcgg aattaactta
    13141 gaaagaaaaa tcattacgca tcaggaagct tcctattcca acgttccagc aaaagaaacc
    13201 gacttcatga tgatgggaga aatcccagcc tcagatgacg aaatggctta tttagatttt
    13261 ttaaataacc cctatctgtt gccacaacaa cttttcaatc aagcaattat caaagaactt
    13321 acggaaaagc tcgatgcatt taaaacagaa aaagacgcct ccaaaagaga cgccttacaa
    13381 acgagcattg atagctggtt aacagaaaat cattatttaa tttacttgca tcatccggaa
    13441 aaaagtcaat cgcttcattc aatgataaaa ggaattgcag aaaatcctta tggttatttt
    13501 gatttaagca aagtgtggat tgaaataagc ccgcttaaaa cattaaaacc agactataga
    13561 caatcccata gaggtaaagc gccacataca ataacgcaaa aatgaagaag cataggcgcc
    13621 agtaaccacg taggattttg cggaactgaa tctcgccttc tttctttgca gccgtgacaa
    13681 caattacaat acctaaaata aataaaaaca ataaaatata taataagaac gagcgattaa
    13741 atagcacaat catgaaaaaa tgaacagcta taatcaagaa aatagtggat aagtcagcgg
    13801 ccaacataat tctccgctga cttttcttta gtttgaaact ggaaaaaaac atcgtcaaaa
    13861 taaacaccac aactggtaaa ataataatta ttgctgttga attagttaac caatcaaaca
    13921 tcgctttctc cttccaaccc tttaattaga tgatataacg catgaagcgt aggaagtgac
    13981 tccccttttt ctaaaattgg cagcacgatt ccatcaattt ctgtcattcg attatccatt
    14041 cggtcaagag ccatcgaaga aaaattagta gctgtcactt ggcagattac ttccactttt
    14101 tctaaagcat tttctactgg caaaaccgtt tgtatttctt ttacaatcgt ctttaataac
    14161 tcgtgccatt ctttattttc aaggagcttt ccattttgga cttgaagaac agctgtgagc
    14221 ggattaatta ctgcattaat aaataatttt tcatttataa tgtctaagta actagcatgt
    14281 ttttcaactg gaaaatctgg atttgagtct aatgtttttg ttaccgcctc acttagttcg
    14341 ccttgataaa tactatactt tgttcggcca tgaccacgcc aaatgactgt tgtatcatct
    14401 tcccgccccg ccccgtgttc gctaatacct agcaaaatag ttcgtttatt accgagtagc
    14461 ggcatgctat ctaaatgcgc cgctccattt tggatgaata gtaacggcac tcgttcaggt
    14521 atcgactgta gcagtggcaa aatgcttttt agtgagtatt gtttaactgc gataattaat
    14581 aattgttgtt ctgataactt tttaatatct gttattactg tggcttgtat atgtatattt
    14641 tttaattcgg aattatcttt taaagaaaga cctttttgat ttaataaatc gctttgttct
    14701 tttctccgcg taaaaagagt gagctcggat gtatcggcaa aatttgctgc gtataaaagc
    14761 cccatcgctc ctgctccaat aattcctact tttagttggt tcgccattta gttcagctcc
    14821 atattgatta atgcttttat tttatcagaa gtagcattct tttgcacttt tgtgcgcaaa
    14881 caaaaacctc gaaagaccca tggcgtcttt cgaggttcgt cttcaacaag tgaaacgtca
    14941 cttgttttta gcaatattag ctgtttgcta catctttgcc atcatattgt ccacattctg
    15001 ggcatacgtg atgggaaagt ctgtattcgc cgcaattcga gcattcgttc atgcccggaa
    15061 gttgaagttt aacgtgtgta cgacgcttac gctttttggc ttttgaagtt cttctaaaag
    15121 gtactgccat ttccttacac ctccttgacg ataactaagt acttgtatcg ttaatctaag
    15181 aaaaataaat tccttaatat attccagctt cacggggagt ttagtcttct tttttctcat
    15241 cgaaaaaatt ggctaatccc gcaagacgag gatccacttt tggttctttt gctatttgtt
    15301 ctagtaggtt accttcttct gttttcattt cccattcatt gcctcgtgga aggttactca
    15361 tttcgagtgc gtcttcactg aaaacttgca tcggaatttc gactagtaaa agttcttcta
    15421 ctacaggggt taaatcgacc atatcctgtt ccatcacatg ccaagattca tctagaactt
    15481 gttctttgga tttcacaaag gtttccgtcg catgcacttc ataaggataa ataacatcct
    15541 caagtgtacg agcacatgga agtgtccaat cgcctttcat agtcaggtta gcggtaactt
    15601 cttctgggtg tacaattagt tccccagtta cttgtacggg gcttgcatca cgaacgtcta
    15661 tattgttctc ttgaaagaac ttttttaggt cagctttttc attaatcgtg aagttgctgt
    15721 cacgatattt ttttaattga ctgatagacc atttcatcct acatcactcc aagcgcaaca
    15781 caaaatatta tagctttttt aaaggctttt gtcaatgctt tttcggggag taaaaccgct
    15841 gccttcattt tatgctaaaa tagattatct aaaggaggga accgaaatga aagcaactgg
    15901 aattgtggtg gaatataacc cttttcataa tgggcataaa ctacatctaa ataaagcgcg
    15961 cgagttaact caagcagatg tggtgattgc ggtaatgagt ggctcgtttg tacaacgagg
    16021 cgaaccagcg attttgccaa aatgggaacg tactaggatg gctctcgctg ctggcgttga
    16081 catggtggtt gaactccctg tctcattcgc gacacaacat gcgacgattt tcgcagaaga
    16141 agcagttcgt attttagatg ccattcatgt ggatacgctg ttttttggca gtgaacatgg
    16201 agttgcggaa gattttacat tagctgcgaa aaaagtagtc gaaaacgaag cccgttttga
    16261 tgaagcgatt cagctggcgt tagttgataa gaaaacttct tatgctagag cttatacaga
    16321 agcttttaaa aagttgttcg gccagaactt gctggatatc acgaaaccta ataacattct
    16381 cggtttccac tacgcccttg ctgcccagaa acaaaacccg tccatttctc ttcaaaccat
    16441 tcctcgtgaa catgcaggat accatgacga ggaagcaaac catgaccaaa tcgcaagcgc
    16501 gaccgcgatt cgaaaattaa tacttgctgg gaagttagaa gaagctagcc actatctccc
    16561 tgcttcttct atagctattt tacgcaatta tgaggggcca tttttatcgt ggacagatta
    16621 ttggtcattc ctgcaatatc ggttaattca agcaggctca gaagaactgg aaggaattcg
    16681 cggtgttagt gaaggaattc aaaaccggat gcagcaagca gcgactaaag cgcaaaactt
    16741 ctctgatttt atagaattaa ccaaaacaaa gcgatacagt aatgcgcgat tacaacgaac
    16801 ggctttacaa attttattaa atgcgaggag tcaaactagc tccccttaca tccgaatact
    16861 cggcatgaat aaaacggggc aacaatatct atcgcttcat aagaaaaata tttctctccc
    16921 tattatcacg acggtttcca aagcaccagc tgggctttta gaagaagaat tacgtgcgac
    16981 aaacatttat acgctggcaa aaggactgga aaattatcag gctggcgact ttcatattcc
    17041 accaatttta accttgtaat ctttacaagg tttttggttg acttttatgg ggctattttg
    17101 ctaagatgtt tgtccgactc aaaaaacagg aggtatgtgt atggtacaag aatatattcg
    17161 attaagagga gcgcgtgaaa acaatctcca aaatatttcc ctagatatcc ccaaacgaaa
    17221 aatcactatt tttactggtg tatctggttc cgggaaatct tctattgtat ttgaaactat
    17281 tgccacggaa tcgcaaagac agttaaacga aacatacagc gcctatcttc gtaatttcct
    17341 tccgaagtat acgcagccgg acgcagattc aattgaaaac ctctccacct ctgttattat
    17401 tgatcaaaaa cgacttggcg gtaattcccg ctccaccctt ggtaccatca cggatattaa
    17461 ttcgattttg cgattacttt tctcgcgtgt cggcaagcct agtatcggga cagcaaattt
    17521 attttctttt aacgaccctg ctggtatgtg ccctgattgc catggtgttg gacaaaaagt
    17581 ttcggttgat ttagtcaaat tacttgatcc aaataaatcg ctcaaagaag gcgccatctt
    17641 atttccgacg ttttcggtag attcatggta ctggaattcc tatgcttatt ccggcttttt
    17701 tgatgtgaat aaaaaaataa aagattatac tgacgaagaa tacgatatgt tgttacatgg
    17761 gaaagatatt aaagttttcc tagaaacacc catgggaagc atgaacgcta catatgaagg
    17821 gttgattcca aaattcaatc gtttgtatat tcaaaaagaa ggcgaaatgt ccgcctctac
    17881 taaaaaacgt gtcgataaat tcacccatat tgcgccttgt acaacttgcg aaggcacgag
    17941 actctccgcg caagcattat cttgtacaat aaatggtgca aatatcgccg acttcacagc
    18001 gatgcaatta gatgaattaa aagcaacgat tgcgagtatt gatgacccta tcgctgctcc
    18061 aatggtcaaa agtgtcacag agcgattgca acatttgatt gatattggtc ttggttatat
    18121 gacacttgac cgccaaactg cttctctttc tggtggtgaa tcgcaacgtg tcaaaatgat
    18181 tcgtcatttg aatagcagct tgactgatct gctttatatt ttcgatgaac caagtatcgg
    18241 tcttcatcca cgagatgttc atcgactcaa tgaattactc gtgaaattgc gcgacaaagg
    18301 aaatacgatt ctcgtggtgg aacatgaccc agatgtgatc aaaatcgccg accatattgt
    18361 cgatgtcggt ccgcacgcag gaaaacatgg cggtgagatt cagtttgtcg gaagttacac
    18421 cgatttgctg aaatcagaca cactaactgg caagttcctc aatcgccatt taccaattaa
    18481 tagcaaaccg agacaaccaa aaggtttttt aacaactgaa aaaagtagtc gctttaacct
    18541 aaaagatatt caggccaaca ttccaaaaga aattcttact gtagtaactg gcgtggctgg
    18601 ttcgggtaag agtaccttga ttcattctgt tttcctaaaa gaatatccag atgcgatagt
    18661 gatcgaccaa tcagccgctc atgccaatat tcgctctaat cctgccacct atactgggat
    18721 aatggacccg attcgaaaag catttggaaa agaaaatgat gtcagtccat cactctttag
    18781 ttacaattcc aaaggcgcct gcgaaaactg taaaggactt ggtttcacaa ctatggattt
    18841 agcttttatg gattcgattc gcacaccttg cgaagtatgt cacggcaagc gattccaaga
    18901 ttctgttttg caatataagc taaatggtaa atccattagc gatgtgttag aactaactgt
    18961 ctcagaagca ctcgatttct ttacggataa aaaaatcttg aagaaaattg aggcaatgga
    19021 agaggttgga attggttatg tcacgcttgg ccaagcactt agcaccttat caggcggtga
    19081 gtgccaacgt ttaaaactcg ccaatgagct tcataaaaaa gggtcgattt atattatgga
    19141 tgaaccgacg actggtcttc atatgtcaga tatcgaacat attttgacga ttatccactc
    19201 acttgtaaat aaaggaaata ccgttattgt aattgaacat aatgtcgata ttattcgtaa
    19261 cgcagactgg attatcgacc ttggcccaga aggcggaagt gctggcggac aaattatctt
    19321 cgaaggcgct ccccttgatt tacttgaaaa taaacaatcc ttaactgcca aatatcttta
    19381 ataaaaaaag ccgttttgtc tatagcagac aaaacggctt tttttattgt agtttttcta
    19441 aataatccac agcatcttgg aaagttttaa ctggaacgat tttcattttg gagtcaatgt
    19501 ctttcgctgt tttaactgct gtatcgtaat tactttcgat acttgggtcg ctttttttca
    19561 tttcatcggt aattggatca ttgggagcaa agaaaacctt cgcaccgctt ttatctgcgg
    19621 caacgacctt ttgatcaatt ccgccgattc taccaacagt tccgtcaggg tcaatcgtac
    19681 cagttccggc gatttttttg ccatctgtaa gatcattttt ttggaaacgg ctgtaaattt
    19741 ctaaactgaa cattaaaccg gcagaaggtc caccgatttt ttctgagtcg attttcacag
    19801 ttggatctgc ggtgattttt tcatcatcca caagcgtgat accgattcct ggagtgcctt
    19861 ttttatcaat tgctgttaat ttgatgttgg cttgctcatt tttgtcgccg tgtttgtagt
    19921 ttattttgac tgtgtctccc acttttttac tgtgaatata atcaataaat tcttggcttg
    19981 atttaaacgc attcccatca atttctgtga ttaggtcgcc agcgtgaagg acatcggctg
    20041 ctggaacgtc atcttttacg cttaatacgt atacgccatc ataagtgact ttgacttctt
    20101 gaccggctgc tttataagcc acttgaatgg cattattttt ggattcgttc atcatttgca
    20161 tttggcgaac gttatattct tcgtcgcttt cattctcgta tttgatatcg ctatcttttt
    20221 ctaactcatg atatggcaaa aatttagcgg tcatatatgt ataaatattc gcttttccca
    20281 ttgcaatcgt cactagactg agcgaaccgt cttttttatt tggatggtca tcaactgtaa
    20341 cgagtggagc aagttcttcc gtaccaccag gttttgaaat ataatacgga actggaataa
    20401 aaaagcccgc tataataata attaacagca ctatcgccgt tatttttttc cactctttac
    20461 gcattttctg tccatctccc acttacttaa attttgcttg tacttgttcg ttcactattt
    20521 caggaacaag ttcgctgata tcaccttgat actgcgccac ttcttttacc atactggaac
    20581 ttaaaaaaga atatttcgta ttagtcatga caaaaaaagt ttcgatttcc gcattgagcg
    20641 ttcggttcat cgaagcaatt tgcatctcgt attcaaaatc actcaccgct cgaagccctc
    20701 tgacaattgc agtagccccg cgcgtagcag cataatcaac agtcaatccg ctcgcacttt
    20761 ccacttgaac atttggcaaa tgagcggtta cttgtctaat catttccatc cgctcttcta
    20821 tcgtgaaaag tggttttttg gatgagttgt ttaaaacgga aacatacagc acatcaaaaa
    20881 tcttcgctgc ccgttcaata atgtctaagt gcccattcgt aatcggatca aatgtcccgg
    20941 gaataacggc aattttgtca cccatttcta cgcctcctga aattcaaata tagataaaac
    21001 agtaattcca taagaaactg atttgatttt ctcgaattta ccgattgtat ctggcatgat
    21061 tgcttctttg tcatgctcgc aaataattct tccattttcg ttaactaatt ctaatttttc
    21121 taaagttact agtaattttt ctaattgttg ctttttatat ggtggatcta agaaaacaag
    21181 gtcgaatttc cactcatttt tatggagtaa tttgagtgct cgttcggcat catttcggta
    21241 tacttccgca cgctctgtaa aatggcatcc ttctaagttt tggcggattg ttttaattgc
    21301 gagcgctgct tggtcaataa aaacagctcg ttcggcacct ctactcaacg cttcgattcc
    21361 aagcccacca ctgccagcaa ataaatcaag caccatatcc ccgtcaaaaa agggaccaat
    21421 aatcgaaaat aaggattctt ttactttatc tgttgttggt ctcgtattgt ttcctggaac
    21481 agcttttaga gcgtgtcctt ttcgttctcc tgcaatgact ctcatgtttt tgcacaacct
    21541 ttacttcaat gtctttttta ctttatcaca aatagaagca aaaaaacagc aagactagtt
    21601 gagatagtct tgccgttttg gttagatact gatttgcaca tcttcgtttt tgtgttcgta
    21661 catcatttct tttttggatt cgtattctgt ttttaagaac ggacggaaag acatttccac
    21721 gcgtttcaca taatgaaaac gagaaacttt gttagagata tcttctactt cagccatatc
    21781 acaatataat accgcatatt tcaacttgcg cgatacataa tgcacatttc caaatcgctt
    21841 caaagatcta acttgtttaa gatgattcat ccaaacgacg atagcttgtc tatcattttc
    21901 cattgtttaa gccccttctt tttaggataa gctttacgct gaacaaccgc agcctccccc
    21961 gctgccacat ccacctgtag aacaagcaga ttttgtttca aaaaacggat taccagttgg
    22021 tactttgata ttctctgaaa ctgcacttgc gagaagcagg ctgatttcgt ccaagagaga
    22081 ttgtaaatcc atctctgccc ggcgaaaagc tgccacattt tgatccatat cgacttcgcg
    22141 tttataagca cgagtctttc tggttacttc tttatagtca ggatgatacc ggccgaaccg
    22201 ctgcacttcc tcgtattgtt cttttattcg tatgaattga cgaatatttt tttgtgaagt
    22261 agcgtcattt agcaacgctt ccttagcaag tttataattt tgcgcttcct cggagtttag
    22321 aatcatgcta gcaagctcat ctgataaatc gagtagcgcc atattttcca ttgtagcgag
    22381 caatctagcc acctccatat aacttacttt tttattatac catagaacta ttatttaata
    22441 ataaaatttt gcgtatagta ttttcgatat gttcccgcac ccatataggt atatgaacca
    22501 tctagtagat tttctctatg tcctttagag ttgagccaac cttctactgc tgctgcacta
    22561 tcgacatagt tataggcgat attttcacca gctttagtat atttgacgtc ccctttacta
    22621 agtcgtttgc ttagatctcc ttgtgtcggt gaagtatggt caaaataatc atttttcttc
    22681 atatcaacac tatgtccata tgcaactttc gcaacagact cgtcccaagc tacttcttct
    22741 attccgtatc gatcacgaat aacattagtg atttctagca cttgtttact agaagcatca
    22801 tcaattgcat tccaatctgc tggcgtcaac ttttcttcat aaatttcacc ttggtaagat
    22861 aattcatagg ggcgcatttt gacgaaggat aatttattga ggtaacgaac actaatcagt
    22921 tttgacttaa atttatcgaa attcagttgc gcataaacgc cacttccaat gttaacaatc
    22981 ggacgggcat ttaagtcttc ctcagaaagt tcgaatttat aatagctgtc tttatagttg
    23041 aaggatattt ccgattgcaa attggcatcg gtaaatactt tttcggtgga cataccaatc
    23101 gtatatggca tgacatttaa atcttgtcct agcgcataaa tggtttgcac gatatttttt
    23161 gttacaccta cttgcatata gcttgttcct ggttgactat aaatgtaatt atcgtaaccg
    23221 tatgctgttt tgtctacacg caccgggtcc ccaaactctt tctttaattc acttacgttt
    23281 ttattaataa atcttgccaa gctggaacta tcttgcactt gtttcggatt ttcattcgtt
    23341 gtttttttat tatcaggaaa attagacttt gttgccgtat cttcggctgt atttttctct
    23401 actgatttac taaaaaaaag atctgtgttg tatccaatga acaggcaaat gattaatagc
    23461 acagctactc gcattataaa cttcacattt tgccctcctc ggcagtattt tgttttcttg
    23521 atgtaacttt cattttacca atactattat catttgaaaa gctttaaaaa tcataaaaaa
    23581 aacaattaca aggaaacgcg tattgcacgc ttcttcgtaa ttgtttttta tttttataag
    23641 aaaatcgaaa taactaccat tgctacgaat aaaattgtca tgtaatttaa tgagtaaacg
    23701 aacatccatt tagcccattt aatactatct tccattttaa agccgtaaat actaagtgct
    23761 aaccaaccga tattcagtaa cgttgctaaa acaacataaa cgatgcctag ttcaaacata
    23821 aagaacggta ggatagttaa taaaatcacc cagaaaaaca tgcttttctt tgtacgttca
    23881 atgcctttta ctactggtaa cattggaatt ccagcagctg cgtattcctc tttccgttta
    23941 atcgcaatcg cataaaaatg cggcggttgc caacaaaaca ttacgagaaa cagcatgatt
    24001 ggtacgatgc taaatgatgg ttcgactgca aaccaaccaa tcagcggcgg gacagcgcct
    24061 gaaaaactac caattacagt attactaact agttttcttt ttgcatatag cgaataaacg
    24121 actacataca aaaagacccc gataacgcca agaactcctg cttgccaagt tgtcataaat
    24181 aacataattg taccgacaac acctagcaca agcgcaacca ttagtgcacg cttaccagaa
    24241 attttcccgg tcattgttgg tctgtttttt gttctttcca taattccgtc aatatcacgg
    24301 tcgatgacat tgttaaaagc gcccgaagca gctacgataa gtgctgaacc gacgatagta
    24361 aaaaatatca cgtctacatt ttgaataaaa gaaattccat ttaactgaaa ggctaaccac
    24421 attcctgtaa aagcagtaat cgtattggaa ttcacgatac caattttcac aagctcggta
    24481 aaatcacgga cagtaaatct actcgccgat aactccccag tcttttctat ctgattcact
    24541 ttttctcccc ctaacacttg ctgatataaa ccagtgattg cgaactgata gatatcttat
    24601 acccttatta tgtgaaaaat acgccccttt tgtcaataaa tcggctttag tcttgtacgc
    24661 tttacttctt caaataaaca cgctacaatt agtttgatgt gtactcatga acttatacat
    24721 agacacaaat tttagtaaaa tctcacacgc atctaaagga gagattggta gataatgaaa
    24781 aaattcttga aagtttggtc cgtactaacg attatttgta tgacggtcgt tgtgtttggc
    24841 ggagcgctcg taacgaaaac tggttcagct gatggctgcg gtaatagttg gcctctatgt
    24901 aatgggcagt tagttcgttt aacagatgtt actccggaaa aattaattga attcatgcac
    24961 cgaatgacga cgggaatcag ttcgattttt gttattgttt tagcaatttg tgcttggatt
    25021 tatatgaaaa atcgtcgcga aacaaaacca cttgcgatta ttgcggttct gtttctaatt
    25081 attcaagcgt taatgggaat ggcggctgtt gtttggggac aaaatccgta tatcatggcg
    25141 ctacactttg gaatttcgat catttgttat gcttcgattg tattgcttgc cttgatgatt
    25201 tttgaggtag accggaaatt cgatgccaga aacctcgtga tggggacgaa attacgtatt
    25261 aatatttatg cactaacgat ttacacgtac ttagccgttt atactggtgc acttgtacgc
    25321 cacgaaaaag caagtatggc cgttccggtt tggccttttg aaaatgggca ctttattatg
    25381 cctacttcag tacaagatta tgtgcagtat ttccaccggt tagccgcatt tattttaatt
    25441 gtttggttgc tgtatgtaac ttggcttgtg ttccgggatt acagaagata ccgcgtgctt
    25501 acttttagca tggtgttgtc gcttgtgttt attgcacttc aagccgttac tggggcgctg
    25561 tctgtttata caggagtgaa cttgtatatc gcgcttgccc atagcttgat tattacgatg
    25621 ttgttcgcgc tactttgcta cttatgctta ctggcatcaa gaagtaaaag caatcgacta
    25681 cgaataaaat aacgaacacg gctggcaact ttttgttgtc agctttttta tttgtttacg
    25741 gcttttgcgt cgttttatgc taaaataagt gagagtataa gtcaaacgag gtggataact
    25801 tggataaaac aaagagaaaa atgatttatg agacttttat gcttattctc atagtgcttt
    25861 cccttgccct attaccgtac agaaacagct ttacatttat tttaaattgg attatttggg
    25921 tgatttttac gctagattat ctggttcgac tttatcgtgc tgataataaa tggcattatg
    25981 taaaaacgca tccgtttcaa ctcattgcaa tcattccatt ttacggtgga tttagagcgg
    26041 ctcggattgt tagttttgtc catctattaa gtattactgc gatggggaga cggtatattg
    26101 taccgattta tagctttttc cgttctaatg gtttaaatcg atttttaatg atttttgtgt
    26161 tacttgtgat tataattcct gttccgatgg tatttatcga acctgaaata aacaattatc
    26221 ctgatgcgct ttggtgggcg attgtgactg cgacaacagt tgggtacggt gatatcgttc
    26281 cagtgactcc gattgggcgg attttggcat cgattatgat gttgtttggg atagcgttta
    26341 tcgggatgat aactagtacg ataacgaact ttttccgcgc taagaaagct actacttcta
    26401 gcacacaaag agcaagcaag attacccaat taattgcaga tacgccagat ttaaccaaag
    26461 aagaaattgc ggtcgtagag caatttttgg cactacgaaa aaaagaactg gctgatgaaa
    26521 atataaaaag tgatagcgaa tgatgctatc acttttttat ttgtttttcg acttggttac
    26581 ggtaacgttc agataaggct tctaccgcca aaatgcgttc taagtcttct tttgtcccat
    26641 ttttatgcaa aactttatcg tggcaaaagg ctactgttac gccgtgtgat tcttggtgaa
    26701 tttgtttgat ctcatccgtt gcatgtataa tgccaggagt aatcgttcgg cataggtatc
    26761 cagtaagtcc agttttgtga attgctttat agagattggg gattccattg aacttttcaa
    26821 ttgtactaca tggatttcgg gcttccgtta tttggataac ggtttcgcca atctggaatt
    26881 tatcgccaat ttgaacagaa ctttccaaca tattcgtagt gatgagattt tcaccaaaag
    26941 cagttacttg tagctcttcg ccaaacattg ctgcccattt cgcgtaatgt tcgtatggat
    27001 aaatacaaac cgtacgatcc ggaccaccgt gatacttcaa attatgcggt gcgtcatttt
    27061 caaaaccggt agtggttaga ctggcggatt gtacaagctt tttttcgatt cccgtcatca
    27121 tccgtttgtt atttgaaagg ttaagttctt tcggcttacc tacagctaaa tgcatgattt
    27181 tccgttccat ctgcttactc ctttgaagtt atttttttcg gcttaaaata gcaagaatgc
    27241 ccgtgataag cgcaataacg ctgatagcta ctgcggtcca taataaaatc gtgttatctc
    27301 cagtactgct tgtatcccct gctgtgttct ccgctcccgc aactacttct ccgtgcgagc
    27361 cagttgcgga tttggaagac tctttgacaa tttttgtggt agcatgtggt gtctcggaat
    27421 cttctgcgcc aacccattca acgatggagc catcttcata atattgatag gcattccaag
    27481 caatttcgcc ttcttcactt ggatttttag cgataaaact aaagcgctgg aattggcctt
    27541 tttcaattcc gttgccttct gtttgccatg ttactgtgcc atttttctta tctactgtcg
    27601 ttgtccagcc tggcactggt tcataagatt cgaaagatac gcctttttct acttttaaaa
    27661 cgattttttt agaggcgaca tctttttctg acggtacttt cattgtgtag gtttcccagg
    27721 agtctacggt cgattcgctc ggtaatacag aaacatgtgc gctcgcttga aacggaatga
    27781 taaagacagc taataaaacg acgatggagc tgataatttt tttcattatt tttccccttt
    27841 actgtgtaat attggttgta aatgtttgat ttatatctgt gaaatctttt gttaaaccat
    27901 gaaccgtaat ttcccacttg ccggtttgat taatatatag cccttccgca aagtattgcg
    27961 tatcatttgc aagtttggct tggaaagttg atttttcatc tgttttagta gattttgttg
    28021 taatcgtcac ttgttcaaaa tctgttttgg cagaaccatc tgctgaagta aaagtgatga
    28081 taaactggtt ttgtccaacg gtcgctggtt ccactcgtaa attgattttt gctttttcgc
    28141 cttctgctgc aattgtttca tcaaatgctt tcggagcagg cggtggcggt gtttgtacgt
    28201 tggttaacac acttgcgaca acaaggataa tcgtcccaat gataagttcc atcaaaatgg
    28261 ttttaaatgg caatcgttgg tttttgagtt tgatataaat gtaatgacct agccctagta
    28321 gtgccattag taaaaataaa ccaattttga aaagaagtat tttaccgtaa ttggttgtaa
    28381 ataaattggc catttgaccg aggttcatca ctgccattaa taggccgctg actaagatgg
    28441 aggcgactgc aatgattgct acaatcgcaa agcggctcca aactgcgcgc gctttcccag
    28501 tctgaggtaa tacgaataaa agcactaaaa tcccgccaac ccaaacgctt gcagcaatca
    28561 tatggagcat atcagcgctg atacttacta ttttatcggc actggcagcg gcgtgtccat
    28621 tctgagcctt cgcaaaaatc aaatatccga ttaatgcact ctcggtcaaa agcgcgaacc
    28681 agctccattg tttcttttta aagaacatca tgatagtaaa aatggcaagt agaagccata
    28741 cgataagttc actgatccaa atataacctg ttttcgtagt caagaacgca actaacttac
    28801 ttggtccaaa actttcactg atagaaacgc ccgttgtgat acttgtttgt atgaaaagtt
    28861 gcatgaagag agccacacct agaagtgcta gcgctaccca agttactttt ttcaaacgtc
    28921 cagaaatttt ttctgttaac tgttcttttc gtggataaag tcctaaccca aaaagaagta
    28981 cgccgataaa cagcgaaaaa cctatgtata aaacggcttt ttgaatcgaa ctaatttgca
    29041 agtccgctcc acttgaggga acttccgctg cttggaacgt cgctttcgta tcccctaact
    29101 taaaagaaat gatccccgta accgcatgtc catccgctga cacaacccgc catgaaacag
    29161 aatagacatc ggcttttaaa tcagccggta gagatgcttc aaccatatga ttattctttt
    29221 tagaaacagt ggttttcccg gtttccactt gtttcccact ggaatctttg acttctatta
    29281 aagggaaatc cgcttcaatt tcttcattaa aaacaagcgt tactttttcg ggtgcggttt
    29341 gaatatgaga ttgatcggcc ggattcgaat tttccaaata agcatgtgca gaaacatgct
    29401 gaactggcac gattaataga tatagtataa tgagaaaaaa actgaccctt ttcaataatt
    29461 tcatttgcta ctcctttttc gaacgaacgg ttttactctt tttaacttat catgtgcaac
    29521 aattgaatgg aaataatcgg ctcatttcct attgcaaatg atgctacgat tatggcatag
    29581 tgatagaaaa ggaggtttta cctatgcttc gttatatcga attgtttttc atgtttgctt
    29641 ttgttacact catcacgatg tggattcaag cacttctagc aaaatggaaa cctactattc
    29701 ttcgttcttt ctggcttcgt acgctcacat ttattattat tggctacgca ttaatggcgc
    29761 caacgctata cataggcagt ttattgctaa aataagttca gttgctttca catcgcagtt
    29821 agattgttta tactgggaag tgggaggtga attttcatga aaaaaatgtt agtagaattt
    29881 agagacttcg cgttaaaagg gaatgttcta gaccttgctg tagcggtagt tatcggggct
    29941 gctttcggta aaattgtttc atctttagta gataacatca ttatgccact tgtcggtgta
    30001 ctacttggtg gtcttgattt tacagattta agtttcaaag ttggtaaatc cgttattcag
    30061 tacggtgctt tcatccagtc catcgttgac tttgtcatca tcgcttttgc catttttatt
    30121 ttcgtcaagg tacttactag ttttattaag aaaaaagagc aaacggtgga agaaacgcca
    30181 gtacctccaa ctgaggaata cttaaaagaa attcgtgatt tattgaaaga acaacagaaa
    30241 taactgaaaa aatccttctt ttgtggaagg attttttatt tacattcgcg cttataaatt
    30301 atgttttcta aagctaaaaa gttaggctat ctatctccct taaattcagg aaaaaaatag
    30361 cctaactaaa ttctatttca ccgttgctgt ttttttaatt gtatcgctaa aaacatttct
    30421 actgctgcga caactaaaaa gataatttgt aaaataaata catagccgat aatcagtaac
    30481 tgtacaatca tccaaactgc gagcacggcc gctgctgcga acatgacttc tttcgttcgt
    30541 ggtaattttt tcagcaaata aatgagtgct gctaaatgga ataatccaac aaatacgaat
    30601 aaaaatatgc ctggtactaa ataatccacg aacggtgaac catcaagtaa tccagttgaa
    30661 agagatagta aaccaccact tggcatgaaa accatggata atccaccata aattgctcct
    30721 attgctgtaa aaccaactat tacaatacta cttatacgtg tccagttcat ggcgttctcc
    30781 tagtcgtttt tctagtagta taccacgaaa actttcattc tgccgttttt cttcgtttta
    30841 tttttttgat taaatcgatc aatacgaaaa ccgcaatacc gcatgcgaca actgtagtga
    30901 gataccaagc tggaccggat tctgcgcgta ctcctagcca ataagtcact gttttcgggt
    30961 taaaaaatgc aaagcaaatt gcacaaaatg caataattcg accaataatg gaattttctc
    31021 tcatagcaag tgcatctcct tttcttttat tataacaagg aataagaaat gataacttag
    31081 cttttcggtc ccaaagttgt ttttcatctg acaagttttg gtttttttac acaaaaaaac
    31141 tacgacaaga gaatttcttg tcatagcctc acagttattt attaacaatg tttagttgtt
    31201 gctcattaac gagtggataa atagctagtt ctttgctctc taaatcctct tggtgcatat
    31261 ccacaccagt aatttgactg tttccgtatg ttctataata ataaattcct ttatcgatat
    31321 tgcaacatga ggaataaatg gtgtgctcgt atttttcccc accaacatca cacagacctt
    31381 tttgttgttc caccgagcct aaaatatgga aaaattggcc aatgctttct gattcagaat
    31441 cacctgaaac agaattcaat ttggtaaaag ttgctttcac aaaacgagac atagaagata
    31501 aatcgccagg taagccgatt ccgcccatcc cacgactata agcatccaaa tcaatctcgt
    31561 tggaaaaatt attttctgga gtttcactcg aaagaacgcg ataattgttt aaattaaata
    31621 gttggtaatc aaatgttgga ttatttgtta acacgccaac aggattatca taaatgtgaa
    31681 gtccatcttt cacacattcc actacaatag attcgttttg atcagccatc aaccaatgta
    31741 aaggagatag cggcaaattt tcactaaagc taatattcac gagattgatt ctctgaagta
    31801 atcttcttgc ttcttttaca gtagcgcatt gaccaagaat ccacggaata aattcaaatg
    31861 gcgttacatt gtccttacct tctgcaaaat ccttgtaatc cgcatttcct gagaaattga
    31921 gtcctgccat actaaggcct ttttcattgg tagcatcgta atacaacggg tagttttcca
    31981 tcacagcagc aataccaata agtgcataat gcttctctat atcctctacc ttgcgaaaat
    32041 ggaacgggta atttttcggc gtaacaacca caacctcttt gtaagaaagt tcataatcga
    32101 aattccttcc aaaatagtga tccttcgttg tataagttat tgacgtacac attaaaaatc
    32161 cctcctcaaa tttttcacca tacatgtata ccagtaccct cggacttttg tgtaaaacat
    32221 aatttgtggt ttttttcaca aaaaatggcc aatttattac ctcatacaag atgatttggc
    32281 tctgataaaa attttttaaa gtatactcct ctattaactt cttgaaaata ttctgctata
    32341 aaatcataat aaaaaagatc cctggaaaat ccagagatct tttaaaaatg tcagctgatg
    32401 ttaaccttac atcatgccgc ccatgccacc cattcccata tcaggaacag ctgctgggcc
    32461 gttttcgtct ggtttgtctg ctacgactgc ttctgtagtt aatagaagtg cagcaacaga
    32521 tgatgcgttt tgaagtgcgg aacgtgttac ttttgttgga tccacaatac cagcgtcaat
    32581 catgtttacc cattcgccat tagctgcgtt gaaaccaacg ccaactgctt cgtgtttcaa
    32641 gcgttcaacg ataaccgaac cttcaagtcc agcgttatgc gcgatttggc gaactggttc
    32701 ttctagggaa cgaagcacga tgttgatacc agtttctacg tcaccttctg cttctagtgc
    32761 tgctacttta ttgtaaatac ttacaagagc agtaccacca ccagctacga taccttcttc
    32821 tacagctgcg cgagtagagt taagcgcatc ttcaatacgt aatttacgtt cttttagctc
    32881 tgtttcagtt gcagcgccga ctttgacaac agctacccca cctgcaagtt ttgccaaacg
    32941 ttcttgtaat ttttctctat caaattcaga agtagtttct tccatttgcg cacggatttg
    33001 gtttacgcga gcgctaattt gtgtggaatc gcctgctcct tctacgattg ttgtatcatc
    33061 ttttgttaca actactttgt tcgctgttcc aagttgatca actgttgctg tttttagttc
    33121 taagcctagg tcttctgtga tgacttgtcc gcctgttaaa atagcaatat cttctagcat
    33181 tgctttacga cgatcaccaa aaccaggagc tttcacggct actacgttga atgttccgcg
    33241 aagtttgttt agtacaagag ttgcttgagc ttccccttca acatcttccg caatgattaa
    33301 cattggacga ccttgttgaa caacttgttc taaaactggt aagatttctt ggatgttgtt
    33361 gatttttttg tctgtaatta aaatatatgg tttttcaaga actgcttcca ttttgtcgga
    33421 atcagttacc atgtatgggc tagtgtagcc acggtcaaat tgcatacctt ctactacatc
    33481 taattctgtt gcaaagcctt tggattcttc aatagtgata acgccgtcgt taccaacacg
    33541 ttccattgct tctgcgatta atttaccaac ttcttcatca ccagaagaaa tagcagcaac
    33601 ttgagcgata gactctttgc tttcaattgg tttagagata gcttttaatt cttcgatagc
    33661 tgttgctacg gctttttcga taccgcggcg aacgcctact ggatttgctc cagctgttac
    33721 gtttttcaag ccttcttgaa tcattgcttg cgctaaaacg gtagctgttg tagttccgtc
    33781 cccagcaaca tcattggttt tagaagcaac ttcagataca agttttgctc ccatattttc
    33841 aaatgggtct tctaattcga tttcttttgc aatcgttacc ccatcatttg taattaacgg
    33901 agaaccgaat tttttttcta aaacaacatt acgacctttt gggccaagtg ttacttttac
    33961 tgcgtttgct aattggtcga caccacgtaa catggcacga cgagcatctt cactaaattt
    34021 aatatctttt gccattttat atttccctcc gattatttct ttttttaatt atttagtaat
    34081 tgctaaaatg tcactttcac gtaaaatcag atagtcagtt ccttcatacg tcacttctgt
    34141 tccagagtat tttgcgaaga taaccgtgtc accttctgca acttcaagtg gttcttttgt
    34201 gccgttatct agcacacgac ctgaaccgac tgcaacaatt ttccctgatt gcggtttttc
    34261 tttggcagag tctggtaata caatcccact cgctgttttt tcctctgctt caagtacttc
    34321 aattacaaca cgatctccta atggttttaa caatgtaaat gacctcctct gatataatta
    34381 cttttttcat tttagcactc gacacattag agtgctaata cagttattat gataccaaac
    34441 tgaataaaaa atgcaagcaa aaacgtttaa aaaaatagaa gaattcttat ttgcggtaaa
    34501 gcttcataac gagtacaata agaagagcta tttccgctta tttgaagcaa tttagccaat
    34561 gttttttata gaaaggatgc gtaatttttg gctaagcgtt atattacgat tgttttagtt
    34621 tatttattat tactattttc tgcatctgtt ggaattccga ttgttcaaca tattttacta
    34681 agtacaacat cactttcagc agagagcgcc gcatcttatg gaatggttat ttggtcgata
    34741 ttctctaatc ttttatcact tgcaattatt attccgatgc tttacagaaa gccaaaagaa
    34801 aataaaatcg aaattggtga aaaaacaaag ccgcttctaa gtattgtgtg gattgtcgga
    34861 ggagtcattg gcttatatgt ggcacaaatt atttgtagtg ttattattac gatgatttca
    34921 ggggagttaa gtaattctgc caatacggag ttacttgttg atttgactaa agctgcacct
    34981 attttcttga tctttatttc tattttggga ccgattttgg aagaacttgt ctttcgaaaa
    35041 gtgttttttg gtgggctaag taatgtgacg aatattcatg tggccgcagt tattagttcg
    35101 cttttctttg gattacttca cggagatatt tctttcttac ttacttattt tgtcatcgga
    35161 ctaattcttt gtttccttta tacgaaaaca aaacggattg ttgtttcgat gggtgcccat
    35221 attttaatga atacgattgt tttgcttttg agtcttggaa ttattggggg ataatatgaa
    35281 aaattcatta ataaagcaaa gttttttata ttttgcactt ggtcttgtat ttgtatattt
    35341 tgttgttgtt cgtgtggctg attatggtta tgatgtgctt gcatgtatac taattatcat
    35401 gacattaatg gattttggta ttggcatcgg tctgattatc actggactta aaagacgtaa
    35461 aaaaaacctg tagaaagtaa gtgttgctta ccttctacag gtttttttat tctgttttcg
    35521 ctggataatt ttccaggaaa tagattaacg tttgtaattc cgttgtaaga tcgatatggt
    35581 gcacacgaac ttgtttcgga acactgatac gagctggtgt aaagtttaga atacctttta
    35641 catctgcttc aattaaacga tcaaccgtta cttgcgcttc gtcagctgga actgtcagaa
    35701 taactacttc cacaccgttt tcacgaacaa tttcttccat atcattcaaa tgatagattg
    35761 gaatatcttg ttgaacacta cctactttcg ctggatctac atcaaatgca gcaacgattt
    35821 tgatattatt atttttcatg aaattataat gtaataatgc tgtacctagg ttacctacac
    35881 cgattagtgc aacatttgtc tgtttgtcct ggctaagtgt tttgctgaaa aagtcgagta
    35941 tgtaagaaac gttatacccg tatcctttct tacctaatgc gccaaagtac gaaaaatcac
    36001 gtcgaatagt cgctgaatca actttcaccg cttcacttaa ttccgcagat gatactcgtt
    36061 ccttacctga ctcatctaag tatttcaagt aacgatgata taatggtaag cgttttgctg
    36121 tcgcttgtgg aattttagtt gtttcctcca tcatgccttc tgtcccttct tcttttaatt
    36181 ttttctgaag ttgaagctat tgtgaactgt acttcctttc acatgcttgc ttatatacta
    36241 taaacatttc acaaggaatg cacaaacttt ttgctcatat ctttcaagta aggttttgtc
    36301 ccgcaaaata tccggtgcag tcctcttttt atattctacg ctaaaatcac aaataatgcg
    36361 agtgttttca caatcttttt tattcaagct gtcttggcta tctcattgcg attacttagc
    36421 ttttaagata aactagtagg gagaacgttc gaggagagag attatgatat tattacaagt
    36481 tcagcaaatt tctaaattct tcggtgcaga agttatttta gataatatta aattagaagt
    36541 taaaacaggt gaccgaatcg ctctagttgg gcgaaatggt gcaggaaaat ccactttact
    36601 taaaattatc gccggcaaaa tgagttatga tggcggaact atttccaaac caaaaagtgt
    36661 ggaaattggc tatttggctc aaaataccgg gctagaatct tctaaaacca tttgggatga
    36721 aatgcttagt gtattcgatt cactgcgcaa aatggaagct gatttgcgca aaatggagct
    36781 tcgtctcggt gaaccggaac tctataatga tccagaaaaa taccaagcac tgatgacgga
    36841 ttatgatacg ttacaacata cttttaaaga aagtggcggc tatacttacg aagcagaaat
    36901 ccgttctgtt ttaaatggat tgcgttttta tccagaagat tatgaagtag aaatcgcttc
    36961 tctaagtggt ggccaaaaaa cgcggcttgc tttagccaaa ttactgcttg ctaaacaaga
    37021 tattcttgtt cttgatgagc ccaccaacca tttagatatc gaaacactag cgtggctcga
    37081 gacctattta caaaattatc atggttcgtt actcatcgta tcccatgacc gctacttcct
    37141 tgataaagtc gtgaatcaag tatacgaaat cagccgaacc aaaattgatc actacaaagg
    37201 aaattacagt tcattcgtta atcaaaaaca agcgaaacta gaacaaatgt ggaaagagtt
    37261 cgataaacaa caaaaacaga ttgccaaact agaagatttt gttgctagaa atattgtccg
    37321 cgcatcgaca acaaaacgag ctcagagtag aagaaaacaa ttagaaaaaa tggatgtgct
    37381 tggtcgcccg caaggtgatg aaaaagcagc gcattttggt ttccaatttg aaaaacaaac
    37441 aggtaaagat gttttaatgg tagatcagct aagcattggt tacgcaaaag ataagcgcat
    37501 tgcttccaac ctaacgttcg aaatgaaacg ccaagatagt ctcgcgctcg ttggtccaaa
    37561 cggaatcggc aaatcaactc tacttaaaac gcttattcgt gatatcccag ctttaagtgg
    37621 cgaattccac ttcggtgctg gcgtgaaaat tggctactac gatcaagaac aagccaaact
    37681 gacatccaac aaaactgttt taatggagct atgggatgat tatccagagt tgaatgaagt
    37741 aaacgttcgt acaacacttg gtaatttcct tttttcagat gatgatgtat taaaaaatgt
    37801 ccagtcttta agtggtggcg aaaaagcgcg acttgccctt gctaagctca ctttacttga
    37861 agccaatgtc cttattctcg atgaaccgac caaccattta gatattgaaa gtaaagaagt
    37921 tttagaagca gctttaattg attttgaagg cacgattctc ttcgtttccc atgaccgcta
    37981 ttttattaac cgaattgctt ctaaaatcgt cgaactagcg cccgaaaaag cgaccgtttt
    38041 cctaggagat tacgattatt atcaagaaaa attagcagaa gaaaaagaac tggcacgact
    38101 tgatgccgag gatcgacgca aaaaaggcga acaagtggaa gcgacctcct ctgttcgaaa
    38161 attaaactat caagaagaaa aagaacaaca aaaacttctt cgccaaagaa aacgcaaact
    38221 agaagaagta gaaaaatcca tggaagcaac ggacaaaaag attgccgagc ttgaacttca
    38281 attaacgaac ccagaagttt tccaagacca tgaaaaagcc cttgaaatca ctcaagagct
    38341 agacgccgta aaagctgacg gagagaaatt aatggaagaa tgggaacaaa taagcgaaga
    38401 actggaatcc atgtaatctg cataaaaaaa ggagcaaaca atgaaaaaga ttttaattat
    38461 ttctagttcg attatcgttg gtttacttgt cattattact atttgcgcaa gtttttactt
    38521 gtatagttat gctttagctc gtgacaattc cagtatgaat gacactgcaa caacagacga
    38581 aaccactgcc acagccaaac tagcaaagaa aaaccgggaa gaaaatgtgg cttggatgga
    38641 aaagcaaaat ctcacgcaat ggacagaaac ctcagcagac gatttgaaac ttgttgctac
    38701 ttatttagca gcagataaac catctaacac aaccatcatt ttagcccacg gttatcgcgg
    38761 taaaagcggt aaagtagaaa tggcaggtct tgctcgaatg tatcatgaaa aatttggtta
    38821 caacgtttta atgcctgatg ctagagcgca cggcaaaagc gaaggtgaaa atattggatt
    38881 tggttggcct gaacgcaaag attatgtgca gtggattgac caagtaatcg acaaaaatgg
    38941 tacggacact caaatcgcac tacatggcgt gtccatgggt agctccactg tccttatgac
    39001 aagcggcgaa aaactaccaa aacaagtaaa aagtattatc gctgattgcg gctatacatc
    39061 gatggacgcc gaactttcgt atcaactaaa agccatgttc cacttaccga aattcccaat
    39121 aatcccaaca gctagtctga ttaataaatt caaagaaggt ttctttttca gcgaagcaag
    39181 tgcggttgat gcggtcgcta aaacagacgt acccattttt tacatccacg gtgatgctga
    39241 tgctttcgtc cctacaaata tggtagacga actctataaa gctaccaata gctataaaga
    39301 aaaatggatt gtcaaaggag cagaacacgg tcaagcattc acggtagatc caaagacata
    39361 cgaagaaaaa gtacgccaat ttttaaataa aacgatgtaa aaagcagtta tcctctagga
    39421 actagatact atctgttagg aaggaaaaaa ttggcaagta ataagtaaat gtgttattat
    39481 ataaatgaaa agagagccat gcgacaacat gactctctcg caaacaccat ttaagatggt
    39541 gacagccttt tatatgattt atttaaaaac cactagctgt caggcttatg agtggttttt
    39601 attttttgtc atttttgctg ttcatgattg ttacgactaa gactgcaaaa gcaatcatca
    39661 gcgtaagact ctcgaaaaca gtcacacgtt tatcctttcc aggtaacgcc taaaaaacaa
    39721 cataaacacc acctactttc tggatgaaaa aggctggtgc accaccataa acttatttgc
    39781 atcacaatta tagcatgcaa gtatctttag aaaaagagtt ggcgcgaaag ttgtatttta
    39841 gaggcataac cagaaaattg agctaataaa aatagactgc agcgaaagta atagttcact
    39901 ttcactgcag tccgaagcgt gcggaacgaa aaatcgcgcg ctttttatat atcttccagc
    39961 aataatcccg gattcgcatt catatcaaaa ccactacgtt ttccttgtaa gaaactcaca
    40021 gtccctgcag cagcaatcat tgccgcattg tctccgcata aggctaatgg tggaataatc
    40081 agttctgtct ctggaagctc tagttttact tcttgaataa ggcgttctcg taaaccttgg
    40141 ttcgctgcca cgcctcccgc aagaagcagt tgtttcacat cgtattgttt agcagcacga
    40201 atcgttttgc ttactaaaac atccacaacg cttgcttgaa aactcgccgc catatcgttt
    40261 ggatttggct cctcaccacg ctgccttaaa ttatgaagcg tgttaataaa ggaagacttc
    40321 aatccactaa aactaaaatc aaacgaaccc tcatccatca tcgctcttgg gaaatgaaac
    40381 gtatcttcgc cgtctttggc aagtttatca atttgcacgc cgcctgggta tgcgagacca
    40441 agtgtacgtg ccactttatc ataagcttca ccagctgcat cgtcccttgt ctccccgata
    40501 atttcaaact cattatctgc tttcattaaa actagttcag tatgaccgcc gctgacaact
    40561 aatgaaagta gcggaaattt gaattcagtt tcaaaacaat ttgcataaat atggccagca
    40621 atatgatgca cgccaactaa aggtaaattg tgcataaaag cgagcgtttt agccgcattc
    40681 acaccgataa gcagcgcacc aactagacct ggaccttctg tcacagctat cccgtctaaa
    40741 tcatccatcg tcacatttgc ttgttttaaa gcttcttcaa tcacaagcgt aatttgctcc
    40801 acatgatgtc ttgatgcgat ttcaggaact accccgccaa atcgtttatg gctctcaatt
    40861 tgagaagcca ccacactcga tataatttca ttgccatttt ttacaacaga agcagctgtt
    40921 tcatcgcagc tagattctat tccaagaatt aatgtatttt ttttcataag tccacccaca
    40981 tcactagcgc gtcttctttc gtatccggat aatagttttt ccgaatggcg ccgtcttgaa
    41041 atcctaattt cttataaagc ccttgtgcta catcgttgga tacgcgaact tctaacgtca
    41101 tccgaacaac tccacgctct ttcgcaactc gaatcatttc tcgcaaaagc gcctcaccat
    41161 aatgattccc ttgataatct ggatgaatcg caatattcgt aatatgtcct tcatctaaaa
    41221 cgagccaaac acccgcataa cctactactt gttccttata tatcgcaagt aaataatagg
    41281 cgtattggtt aataataaat tcattccgaa aagctgcttc cgtccaaggt accgtgaatg
    41341 ctgcattttc gacattcata atacttttca agtcagtcac ggttgcttcc cgaaataata
    41401 aggcttcatc caaactcact cggaacccct cgattccaac catttgctct ccgcttctgc
    41461 cagttttaaa taatcaggaa caaagttgtc tgccggttct ccgtctaaat tctctgccag
    41521 ttttacaaga gaactagctc gtgagtaagt ataatctgcc tgcgcaaaaa ccgcccgctc
    41581 accgaggact tccgtcacag tcacacaaat ttgttctgtt aaggttccga caaataaaat
    41641 gggctcctcg ctagacagga attgttctag taattcagtt aacgcaatat gtccgtccgc
    41701 gataacactc tgcatttcac cttcgcttgc ttgataaacg cccgcatata cattactacg
    41761 gcgcgcatcc atcaacgcga ccacttttcc aggaaagtac aaaccattct ctgctaaaag
    41821 tgccaaagag gaaatcccga caatcggaat ccctgcatcc caagccattg ttttcgcaac
    41881 tgttacacca atacgaagcc cggtataaga ccctggacct tttgctacag caatcttttc
    41941 taagtcagta ggttttactc cacattcttc catcaaaaca gcaatcgctg gaagcaaccg
    42001 cacactatga ttttttttca aattcgttgt atattcgccg ataacgacac cttcattaaa
    42061 aagcgctatc gccatcgtat cggaagacgt atccatccca agtatcattt cccaaaaacc
    42121 tccattgcaa gttgctcata tctttctcca actggcttca caaccaattt acgcgtattc
    42181 tcatctatat gaaaaagctg aatttccaag tattcttctg gcaaatcttc gcgaacaaac
    42241 tgcgcccact caaccacgct tacacctgct ccgtagaaat actcctccaa accaagttca
    42301 tccgccgaag catcttccaa acggtacacg tccatatgat aaagtggcaa gcgtcctttc
    42361 ttatattcac gaatgattgt aaatgtcgga cttttaatca tttgcggaat caaaagacct
    42421 tcaccgagac ctttggtaaa agtagtttta cccgcgccga gatcaccttc aagcaaaatc
    42481 acatctccag ctgtcaattg ttcaccaagt tgttttgcgc gaagccttgt ctctctttca
    42541 cttgtcatta tcaattcgaa ttccattacc tcacccgtcc atcattttct ctacatatca
    42601 taccacaaag ccgcgccaaa ataaaaatca aaaaaacgca acgacctaag tcgctgcgtc
    42661 tttcgattga ttaataatta gttccactta tatccattcc gccatacatt tttgctgtta
    42721 catctgtgat gattttattt agctcttcgc tagaaataac ttcatctttt gtaggaaaat
    42781 cttcaattgg aacaaattct tctgcttttg ttttcaccgt aaagctaata gactcaggag
    42841 cgctcgcatc agatttatct tctatttttg tttgaagagt aagtgtatct aagctgttct
    42901 cttttcctga ttttacagta agtttattat taattaagta cgttttattt tcttttaatt
    42961 ctttcgcagc atctgttaaa ctcgatttca tttctgtata cgtggaatca aaatctgtta
    43021 ctgcatctga accttggctt tctgcaataa ctttaagatc tgcttttact ttttcatcat
    43081 ccattaattt agctacttgg ttcatcaagt tcgcgatatc ggcgttttta atcgtaacgc
    43141 taacagtacc atcatccgct tctttaaaac gatctttttc taagcccgtg aaataagtat
    43201 caactaattt tatcgctttt ttgtttaaat ctttcgtcgc tgcttcaatt tctttcgtat
    43261 ctacagctgt ttttgcctct ggttgatctg ttaatgaact ggttaattct tcagtactaa
    43321 gatatttatt ttttagatca gggtagtcgg tgttaatttt agaccacata ccaccagtcg
    43381 cttgatctaa ataactaagt aaagaagcat ctggctctac aatggtttta agtggaatat
    43441 aggcatttcc cgttttacta tctactaaaa aatctaaatc cattgaaatt ggtagtaagt
    43501 tattcgttga tgttacattg aattttgctt ctgatttgtt tgctttcttg tcagttgatg
    43561 ttgttacaga aagcttaatg tcttttaaaa tccccatcgt ttgagcactt gggtcggtgc
    43621 ttgaaacatt gatatcattt acagcaaaag aagttgtata tgtagattga tcaggtacat
    43681 tcatcccatt tttcattgtt tgaacaaatt taccttgtgg tgtttttgct gctttttctt
    43741 ccgcgctttc cccacaagcg ctaattacta atactaaagc taacaaaatt gataataaaa
    43801 tccctttttt catgattctc ctcctaggtg attaatacat taaaattaac acactttaag
    43861 gtctgaaaac aagagaattt acaatagttc attagtctga cacaaattcc tataaaaaaa
    43921 gcgttccttt tagaaaggca cgctcgcttt tattttggag tcacttttaa agatgtagca
    43981 ttttcagata cttttccagg ggcgggtgaa gtaatatttg aaccttgtgg aaatacagct
    44041 ctaacagtat cttcctcttt gatatcagca agtttcattg cttttccagt ggtcgcattt
    44101 gttacggcag tattgctact cactgtaatc aagacttcac ttgcgtaatt gtttttttca
    44161 ccactccacg ttaatgtccc attgactgtc aactcattat tattctctaa caaactagta
    44221 tccgttactg ttccgtcaag gactaaagca ggcacttctg cttgattaca acccgctaaa
    44281 aatagtacca ctagtaaaac cggcaatatt acctttttaa aacctgtcat cgctctctct
    44341 cgtcctctct gaagcttatc gttctttcta gcatagcatt tagcagaaat acaggcaatt
    44401 gttttcttgt ttcttaaaca attcttatac accaagcatc aaaccgagaa aagcagctat
    44461 taagccaaac acataggtac aacctagata agaaaataat acacgataat tcgtcttcca
    44521 ttttaattcc atactttcca ctttaaacgt agaaaaagtc gtatatcctc ccataaatcc
    44581 tgtacctaaa aaaagttgcc aaaccggtcc aagagcagag gaaacaagaa aacctaataa
    44641 aaatgaacca gtaatattaa taaaaaaagt cgcaaaagga aagtttgttt tccatttact
    44701 tttgaccaat acagaaattc catatcgtag catcgcacca agagccgctc caaatcctac
    44761 aagtacgaaa ttaactaaca cgatgctcac ctcgattcaa aagcttattg ctaagcatcc
    44821 gcccaaactt caccataata agcccaccaa tgaaactagc taacacatag ctaaccgcaa
    44881 ataaccatgc gccactttgc actagttgaa ttgtgtctac actaaaagcc gagaaagtcg
    44941 taaacgcgcc aataaaacca gtcccaatcc cgttcaaaat taccaatgaa atacgagatt
    45001 tttctgccaa aaattgcata agaaaagcca acaaaaaaca acctattaaa ttaactgcta
    45061 atgtcgcaga aggaaaatcc ccgccaccaa gccacaagtt cattgcatat cggcacatac
    45121 cacctaatgc gccaaaaacc cctacatata aaaaatacat ctccaagacc ccacttcaca
    45181 aaaaaactac cctgaaatat ttgtattccg ggcagtcgcc tttgtcctat ttctactata
    45241 ctataacgca aaacattcca attattcaac tcactggaag tcgaaggatg gtcttcattt
    45301 tttctgggtc cactttacgc ggatcactca aataaatttc gtggtgttta cgaacagccc
    45361 ctgtatcatt atgaagtcct tctgtttcca tgaattggtg catttccgcg accgttttca
    45421 cttcttcact aaaaggacca atatgcatca tctgcacaca ttctccttct tcaaaacgaa
    45481 ccaattttac gtgactcgta tcaagatcag gctttttctt cttagcaacc tctttcgccc
    45541 attccaacac ttcttcggtg acaaagtccg gttgtctaag aatggatgtc caaagccacg
    45601 catctctatc ctttaaatca aacctctctt cagaccacca aaaaccttcc agcggcggta
    45661 caacaaaatc cgtgtaacca tccagacgcg tctcgcccat cttgctcatt ttaatcgtgt
    45721 acgcaatcgc ataaagagac tgcactgctt tttgatacgc ctcaccgtcc ggatcacctt
    45781 tcccatccac catcaaaaaa ttcatttccg gaacaaaaat acgctctggc ttccttttag
    45841 gcgcgtagaa tttcttctct tcttttttaa aatcaatttt cttttcagtc atttgaattc
    45901 ctcctcgttc atccaattcg gcactatcct ttgaaaatta tcgtgactag cgaccgtctt
    45961 tgctgcataa tccatcaact ttttaaaatt acgagattca ttttttgctg cccaattaac
    46021 agccgaagta atatgcatcg ccgtgtatag cgcgtaaaga ttccaaaaat ccgtaacttc
    46081 ttctttatca atatagccta aaatatttcc tcgtgcaaaa ggtatactga cctctgttgt
    46141 aaaaaagccg attttagcta gatcaaataa aggatcgccg aactctaacc gattaaaatc
    46201 aattagcccc acaaactttt tgttgtttaa aataatattc gctggatgaa aatctccatg
    46261 ttgtaaacaa atcggtctat tttttaatct agctatattc tcattaacaa acttttcggt
    46321 gtctgttaaa aaagaagctg ttatttctaa ttcttttaat tccttcactt ttcgttcaaa
    46381 tttaaccgtt tgaaaatcca accagttcat ttttggtata gcaagcggaa ttttatgaac
    46441 ttctcgtaaa atttcccctg ctgaaaaacc agcttttaac tgttctgaat gagataaacg
    46501 ggtcatgcca atttctgcgt cttcgcctcg caaataacta ataatcatat agccttctct
    46561 ttcgataaag ccgaaatcat atgcttttgg aacaaatgga gtttgagaat ctaatgcttg
    46621 gattatttta aactcttgct cccgttcttg aagtaaatct ataggaaaaa cacgaacaag
    46681 gtaagtttca tccacctggt atttcctatc aacagaaaag cctttgttta tttccgaaat
    46741 cactttcgca ttatgcaaca tttttagttg tgtcacatcc ataatcagct ctcctcctat
    46801 aaattcacta ttcttcatta tacaagaata cgcttacttt tttccaatta tcttcgtaga
    46861 atttgttgac aaaataacag aatcaatatt ataattagtt ttgctacgca tacgc
//
LOCUS       DASDYK010000008        43809 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.008, whole genome shotgun sequence.
ACCESSION   DASDYK010000008 DASDYK010000000
VERSION     DASDYK010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 43809)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43809)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43809
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.008"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            2..466
                     /locus_tag="U0308_000514"
     CDS             2..466
                     /locus_tag="U0308_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEM2315528.1"
                     /translation="MLQQYERVLVAVDGSKEAERAFQKAIQVANRNDAALGLVHVIDT
                     RAFSSVANYDTSMADKATEYADELLSGYKEDALKAGVTKVESYIEYGSPKTAITKEAA
                     KAFQADLIMCGATGLNAVERLLIGSVSEYIIRHSPCDVLVVRNDVPDYKEEK"
     gene            complement(518..1711)
                     /locus_tag="U0308_000515"
     CDS             complement(518..1711)
                     /locus_tag="U0308_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003741223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEM2315529.1"
                     /translation="MEKTIAINAGSSSLKFQLYDMPSERVITAGIVERIGLKDSIFTI
                     TVDGEKIKEIIDIPDHEIAVQMLLEKLINHKVIGSYDEITGIGHRVVHGGERFPESVY
                     IDDQVIKDIEALSELAPLHNPANVTGIKAFRKILPDVVSVAVFDTAFHQTMPPASYLY
                     SLPYSYYEDYGIRKYGFHGTSHKYVSERAAELLGRPVEELRLLTCHLGNGASIAAIEG
                     GKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVLDVLNKESGMLGVS
                     GISSDLRDLEDEAAKGNDRAELALQVFVDRIHKYIGSYAARMNGVDAIIFTAGIGENS
                     SYIREKVLRGLEFMGVYWDPALNQVRGEERFLNYPHSPVKVIIIPTNEELMIARDVET
                     IKNNH"
     gene            complement(1735..2733)
                     /locus_tag="U0308_000516"
     CDS             complement(1735..2733)
                     /locus_tag="U0308_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2315530.1"
                     /translation="MANEATQELFQVLDNTAIILQNELEISYLEAVYETGENLFQKEV
                     LQKEELSSEKQLKLQASYESIELENFSNEEIRKGLQLALLKGMKHGIQVNHQMTPDSI
                     GFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLI
                     SLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDLPVGYYPDDENAKTFELCREEG
                     HSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPET
                     LFKSEQARKSILILQKADVDVKPPKEVLLANLSSLTDPSVTAPILAEIENWFKRKR"
     gene            complement(2924..3421)
                     /gene="tpx"
                     /locus_tag="U0308_000517"
     CDS             complement(2924..3421)
                     /gene="tpx"
                     /locus_tag="U0308_000517"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HEM2315531.1"
                     /translation="MTQVTFKHNPVTLVGTERKVGDKAPNFTVVNRDLEEVTLHDYDG
                     KVRLISVVPSIDTSVCSTQTRKFNEEASNLDNTVVLTISVDLPFAQKKWCAAEGLPNA
                     ITLSDHRDLSFGEAYGVIMKELRLLARSVFVVNAAGEIVYTEVVPEGSDHPNYEAAIE
                     AAKKA"
     gene            complement(3482..4018)
                     /locus_tag="U0308_000518"
     CDS             complement(3482..4018)
                     /locus_tag="U0308_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEM2315532.1"
                     /translation="MANENVAFESKRQVYHYEPPIQKEEAIPKQYFAGFWIRFLAYLV
                     DLVVIAALKGIIINPIFRVSGMGMDDSFFTFYWGMTTIIFLAYFILLTKFFGQTLGKM
                     LFGLRVVKLDGEKLTWLTVLFREGAMRFVLKTIWPLYVVCAFTPNKQGIADFFESTSV
                     VHTGYLELDEKWVNGAKK"
     gene            complement(4038..5051)
                     /gene="sppA"
                     /locus_tag="U0308_000519"
     CDS             complement(4038..5051)
                     /gene="sppA"
                     /locus_tag="U0308_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEM2315533.1"
                     /translation="MNAKRWIALGIVFALLLVSALAKFTSSQIASKEDSSPTFVESLF
                     ADTGELTETVIEEGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRND
                     DNIQGVLLYVNSPGGGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPAD
                     KIFASKETLTGSLGVIMQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKI
                     MQSMIDDSYNEFVKVVAQGRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALE
                     ALKKEQGLAGATVIQYDAPGDFSSLFSVAAQKISGQNADISQLIKLTGTLKAPRMMYL
                     YGE"
     gene            5230..6033
                     /locus_tag="U0308_000520"
     CDS             5230..6033
                     /locus_tag="U0308_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HEM2315534.1"
                     /translation="MAKTIFYFSYRKTEELHAKAKELKKITTDYGYELTDDYQKANVI
                     ISIGGDGAFLKSVRETGFRQDCLYAGIALTEQLGQYCDFHINQLDEIIKAAIEDRWLV
                     RRYPTIYGTVNNTKAFYVLNEFNIRSSIIRTLTMDLYINDSHFETFRGDGMVISTPTG
                     STAYNKSVNGSIVDPLLPSMQVSELASINNNKFRTLGSSFILSPKRKLRIEIASEEGN
                     NEFPMIGMDSEALSIQHVHEVNLEVGDRFINIIKLPKNSFWDKVKRNFL"
     gene            complement(6065..7015)
                     /gene="argF"
                     /locus_tag="U0308_000521"
     CDS             complement(6065..7015)
                     /gene="argF"
                     /locus_tag="U0308_000521"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEM2315535.1"
                     /translation="MTMYAKNNTAGKDMLSLLEWNKEELTDIIKLAVAMKTNPAHYSH
                     ILSGKILGMIFDKPSTRTRVSFEAGILQLGGQAIVMSSKELQIGRGEPIKDTAHVMSE
                     YIDAIMIRTFSHEKVEELAYHAEIPIINGLTDLHHPCQALADLMTIYEWKDQLEGVKL
                     AYIGDGNNVCHSLLLAGAMVGIDIRLAMPKGYEVDETILAKAENLAKQSGGKIFVTED
                     PKLAVTDADFIYTDVWTSMGQEDENAKRLADFGEKYQVNAELVSGAKPDYHFLHCLPA
                     HREEEVTAEIIDGNHSVIYQQAGNRLHAQKALLAAILEAK"
     gene            complement(7012..8172)
                     /locus_tag="U0308_000522"
     CDS             complement(7012..8172)
                     /locus_tag="U0308_000522"
                     /EC_number="2.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine transaminase"
                     /protein_id="HEM2315536.1"
                     /translation="MKHVFPTYKRFPIDLVNGTGTVVTDKNGKTYLDFTSGIAVCNLG
                     HCPANVAEAVQQQLTNIWHTSNLYECALQDSVAELIADGKDRLVFFCNSGTEANEAAL
                     KLARKYTGKEKIITFEKSFHGRTFGSMSATAQAKIHQGFGGLVPGFTYVPYNDIEAFR
                     AEIDEHTAAVMLEVIQGEGGVIPANAAFLLEVQLLCKKMGVLLIIDEVQTGLGRTGTL
                     YGFEQIGLEPDIFTLAKGLGNGLPIGAMVGKANLSSAFGPGSHGSTFGGNKLALAAAK
                     EILRTMKQAGFLEEVNAKADYFRYLLEVHLEALDNVSVIRGGGFLIGIELENTAEPVV
                     TELRDKGLLILTAGANVLRILPPLTVSYAEIDQAIYLLKSVLENQLIGSEEG"
     gene            complement(8169..8921)
                     /gene="argB"
                     /locus_tag="U0308_000523"
     CDS             complement(8169..8921)
                     /gene="argB"
                     /locus_tag="U0308_000523"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEM2315537.1"
                     /translation="MENTIVVKLGGVASDNLTEDFFQQIIQWQAANKKIVLVHGGGHY
                     ITKMMKSLAIPVETKNGLRVTNKATLEVTKMVLIGQVQPAITTAFQKRNISVIGLNAG
                     DTGLLEADFLNDANLGFVGKITKVKTDLIEQLLSENIITVIAPLGINSEYDWLNVNAD
                     TAACEVASALQAEALYLLTDVPGVKKGSEIIGEIATDEIEKLQNAGVIKGGMIPKLAS
                     AAFAAENGVGKVIITDSLNTSGTKIKNKVAIG"
     gene            complement(8934..10130)
                     /gene="argJ"
                     /locus_tag="U0308_000524"
     CDS             complement(8934..10130)
                     /gene="argJ"
                     /locus_tag="U0308_000524"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEM2315538.1"
                     /translation="MELVKGNIASPKGFYADGKHAGLKRKRNDIGWIYSEVPANAAAV
                     YTMNQMQAAPIFVTKDSFQSNAKLQAIIVNSGNANACTGNQGMLDALAMRAQTAEKLD
                     IPLDYVAVASTGIIGDMLPMDKINAGIEMLEKQTGNAADFEEAILTTDTFQKQISFQT
                     EIGGRKVTMSGVAKGSGMIHPNMATMLAFITTDAAIPAELLQKLLKIKVDKTFNQITV
                     DGDTSTNDMVVVMANGCAENSMLQEGTADFAKFADMFQAVTEHLAKSIARDGEGATKL
                     IEVQVNGATKTEDARMIAKKIVSSSLVKTAAFGGDGNWGRIICAIGYSGGRFAPDNIT
                     IKIGGIEILNHSSQTIFNQQALDAYLEEEHIIIDVDLHIGLESGTAWGCDLSYEYVKI
                     NACYRT"
     gene            complement(10146..11177)
                     /locus_tag="U0308_000525"
     CDS             complement(10146..11177)
                     /locus_tag="U0308_000525"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEM2315539.1"
                     /translation="MKVSIIGATGYGGLELIRLLHQHASVDIATLHSFSAQSETLATF
                     YPHLKDLEASPLEKINSAEIIEKSDTVFIATPSGIAKDIALPYVDAGLNVIDLSGDFR
                     LKDRQLYEKWYGKSAAPIEYIAKAEYGLAEFRDKKEARFIANPGCYATATLLGIAPLV
                     ISQLIDPTSIIVDAKSGISGAGKVPSASTHFTETNENMTLYKMNSHQHIPEIMQQLTK
                     WDETIPAIQFSTSLIPITRGIFTTIYVKPKNPITQKELHTLYKSTYENAPFVRIQPEN
                     VYPTVKQVTASNYCDIGLAYNEKTNVITIVSVIDNLVKGAAGQAIQNLNIMANFAESD
                     GLRFIPVYP"
     gene            complement(11348..12559)
                     /gene="thiI"
                     /locus_tag="U0308_000526"
     CDS             complement(11348..12559)
                     /gene="thiI"
                     /locus_tag="U0308_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HEM2315540.1"
                     /translation="MEFDRMLIRYGELSTKGKNRKQFVTKLAQNVKRAMTDLPEVRIH
                     GERDRMYIILNGADYQLAEERLKPIFGIQSFSPAVRVNLDVEEVKAAALALVQDAHEE
                     NGTFKVAARRSHREFPLDSNEINQEIGAYVLQNMEDLTVNVKNPDVKLTIDVRKEGVF
                     LSCRTILGAAGLPVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFHSPPYTSEQ
                     AKQKAVDLAAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRRMMLRITDELR
                     RRRNGLAIVNGESLGQVASQTLESMLAINAVTATPIIRPVVSMDKNEIIQIAQKIDTY
                     NLSVQPFEDCCTIFTPPSPKTKPKLDKIEHYESFTDFEALIAKALDNIETISVNVAET
                     AQVKDEFADLF"
     gene            complement(12561..13700)
                     /locus_tag="U0308_000527"
     CDS             complement(12561..13700)
                     /locus_tag="U0308_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM2315541.1"
                     /translation="MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKEL
                     LDASRKQIAAMVSALPEEIIFTSGGTEGNNLAIKGLVYSYQNRGKHIVTSSIEHPSVR
                     MVMEELEQEGFTVTYLPVDKNGVIKMEALKAALTDETILVSIMGVNNEVGSIQPLHEI
                     GEMLKLLEHTFFHVDFVQGIGKIPLALNENAIDLLTFSGHKFHALRGTGILFKRKNVH
                     LHSEILGGGQEMGYRSGTENLAGNVALAKALRLTLENEPRKEALIEIRDYLLTEIAQM
                     SDMTVHTKQSVAAPHIVCFSAKGHRGEILVHALEKEDIYISTTSACSSKQKLASSTLK
                     AMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK"
     gene            complement(13828..15543)
                     /gene="ezrA"
                     /locus_tag="U0308_000528"
     CDS             complement(13828..15543)
                     /gene="ezrA"
                     /locus_tag="U0308_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation ring formation regulator EzrA"
                     /protein_id="HEM2315542.1"
                     /translation="MYYMLIGFIIVVIAVIGAGYILKRKHYQRINELEEKKIKLRERP
                     VIDELSKVKKLKLTGQTEALFESWRSSWDEIETRLFPDLEEVLLEAEMNTDRYKFRSA
                     THAENDIEQMLVVIEKQMDQILGGLKELLISEEKNAKESRATKEKFAELRREVLTRGF
                     KLGETLPYIETKLSELSESLNSYDSLTDQGDHLEAREIVIVVQKEMQVIEAQMERIPS
                     LLHETDTILPEEMTKLRAGYEEMVRKGYYLAQMELDKEISRMKNQIDKMKKNVINLDL
                     DEAEQGVEELHNEIDLFYDTLEHEAEARHFVKENHSPTSDKLQRQNAVSDALAEQITE
                     VKQTYHVAEDDLAVYLKTSAKLSEAKENFEQLTALIASGEIAYSAAQDTLKEIDAALI
                     TISAEQDKFAEELRSLRKDELEARDDAERMRRAIITLDRKMERERLPGLPEEYLSLRE
                     HMGESINALEKRLEEKPLNMKAVSQDWRIAEEDLTHLTEKAEEMMENVRLVEHVIQYA
                     NRYRLRNKELADELVQAENHFYNDYQYKKALEIAVTALEKVETGAFKKVEKAYESKVS
                     VDDIE"
     gene            15837..16325
                     /locus_tag="U0308_000529"
     CDS             15837..16325
                     /locus_tag="U0308_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEM2315543.1"
                     /translation="MIEIKKMTGTKEENYALALKQVQAMIAGEPNLIANLSNVSSILN
                     QALSDINWVGFYLLEKETNQLVLGPFQGLPACIRIPLGKGVCGSAASDQKTYIIENVH
                     DFPGHIACDAASNSEIVLPIVKNNQLLGVLDIDSPLFNRFDEVDQLWLEKIRDAITQE
                     IN"
     gene            16537..17139
                     /gene="rpsD"
                     /locus_tag="U0308_000530"
     CDS             16537..17139
                     /gene="rpsD"
                     /locus_tag="U0308_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEM2315544.1"
                     /translation="MARYTGPSWKVSRRLGISLSGTGKELERRPYAPGQHGPTQRKKI
                     SEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLG
                     LARTRRAARQLVNHGHITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSF
                     VPEYVTFDAEKLTGSLNRLPERSELAAEINEAFIVEFYSR"
     gene            complement(17239..18498)
                     /locus_tag="U0308_000531"
     CDS             complement(17239..18498)
                     /locus_tag="U0308_000531"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEM2315545.1"
                     /translation="MNIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSM
                     HIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLR
                     VQLGKIFDFEGNSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRLEVG
                     ISFTEFAYQILQAMDFNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGL
                     TIPLLTKADGTKFGKSEGGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEA
                     EIDELAKQVETEPHLRAAQKTLAAEMTKFVHSEEALEQALKISKALFSGDVKALTADE
                     IEQGFKDVPTFVAEDTEANLVDWLVTLGIEPSKRQAREDVANGAIYINGERQQDLEKI
                     MDASDRIENKFTIVRRGKKKYFLVSYK"
     misc_binding    complement(18558..18766)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            complement(18820..19827)
                     /gene="ccpA"
                     /locus_tag="U0308_000532"
     CDS             complement(18820..19827)
                     /gene="ccpA"
                     /locus_tag="U0308_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite control protein A"
                     /protein_id="HEM2315546.1"
                     /translation="MNVTIYDVAREANVSMATVSRVVNGNPNVKPVTRKKVLDVINQL
                     GYRPNAVARGLASKRTTTVGVIIPDISNVFYAELARGIEDIATMYKYNIILSNSDENE
                     DKELQVLNTLLGKQVDGIIYMGERISEQLQEEFDRSPAPVVLAGAVDMENKFASVNID
                     YKQATKEAVKRFVDNGHKQIAFVSGSLNEPVNREMKLAGYKEALEEAGISYQEDYIIE
                     AKYNYNAGVKVWAELSALSKKPNAVVVADDELAIGILNAALDAGIKVPEDLEVMTSNN
                     TKLTLMSRPQLSTIVQPLYDIGAVAMRLLTKLMTSEEVDEKTVILPHSEKLRGTTKEK
                     K"
     gene            complement(20062..21147)
                     /locus_tag="U0308_000533"
     CDS             complement(20062..21147)
                     /locus_tag="U0308_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-deoxy-7-phosphoheptulonate
                     synthase/chorismate mutase"
                     /protein_id="HEM2315547.1"
                     /translation="MVNTNLEELRTQVDQLNIDLLELISKRANLVQEIGKIKGTQGSL
                     RFDPLREREMLNTILAANEGPFEDSTVQKLFKEIFKAGLELQEEDHSKALLVSRKNKK
                     EDTIVTVKGLPIGNGEPVFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAFKPRTSP
                     YDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVIQIGARNMQNFELL
                     KAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDI
                     SAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPDPAVALSDS
                     AQQMDIPEFEEFWNAILASNLVPHKIK"
     gene            complement(21367..21891)
                     /locus_tag="U0308_000534"
     CDS             complement(21367..21891)
                     /locus_tag="U0308_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEM2315548.1"
                     /translation="MAEKDGINTKDFLIGGLIGAIVGSAAALLFAPKSGKELREDLNT
                     QVDTIKEKGNQWKDVAYEKGIEISGVAKGTKDKLVDSAGGFVDVVKDKSGKLADTVSK
                     QSKAVKEVVSQNKEENQEAAKQAADAVKNEAKDAADDVEKAADKAKKEAKKAVDEGKD
                     EAKKIASDVKKEVK"
     gene            complement(21913..22368)
                     /locus_tag="U0308_000535"
     CDS             complement(21913..22368)
                     /locus_tag="U0308_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF948 domain-containing protein"
                     /protein_id="HEM2315549.1"
                     /translation="MIVILYIAALIAAIALLVIAIYLGKTLKSTSQTMDEVAKSLEKI
                     TVEVQGITGQSQKLLDKTNTLLEDVNGKVAKVDPVFDAVGDIGTSLLGLSQSVRELAT
                     LATNKVEQNEAKISQAVSISNSILSFREKMKANKAAKEAAKEAAEQSNF"
     gene            22624..23736
                     /locus_tag="U0308_000536"
     CDS             22624..23736
                     /locus_tag="U0308_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M29 family aminopeptidase T"
                     /protein_id="HEM2315550.1"
                     /translation="MRDARIEKLAHNLINYSVKLGAGEKVLIENFGVQKELVMALVEE
                     AYKAGGFPFVSLKEPQIDRAMMLGADSSQYAKIAEFEGNVMKEMDAYIGLRAGDNINE
                     TSDVPADKLKIHGETVGKMHSDIRVKQTKWVVLRYPSSSMAQLAKMSTAGFEDFYFDV
                     CNLDYGKMSDAMDGLVELMNKTDKVHLVGPGTDLTFSIKDIPAIKCAGEMNIPDGEVF
                     TAPVRDSINGTLTYNTPSPYQGFTFENVSFTFKDGKIIEATANDTARINKVLDTDEGA
                     RFVGEFAIGVNPFIHEPMQDILFDEKIEGSFHFTPGQCYDEAFNGNQSAIHWDLVNIQ
                     RADYGGGEIYFDEVLIRKDGIFVLPELEALNPENLV"
     gene            complement(23777..24322)
                     /locus_tag="U0308_000537"
     CDS             complement(23777..24322)
                     /locus_tag="U0308_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEM2315551.1"
                     /translation="MAERLVGTQAPRFEMEAVMPNQTFGKVSLEKNIEDDKWTILFFY
                     PMDFTFVCPTEIVAISARSDEFDALNARIIGASTDTIHSHLAWTNTPIKEGGIGRLNY
                     PLAADTNHQVASDYGVLIEEEGVALRGLFIINPKGEIQYEVVHHNNIGREVDEVLRVL
                     QALQTGGLCPINWQPGEKTIV"
     gene            complement(24467..25810)
                     /locus_tag="U0308_000538"
     CDS             complement(24467..25810)
                     /locus_tag="U0308_000538"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEM2315552.1"
                     /translation="MTIYHFVGIKGSGMSALAQILHDKGFQVQGSDVDKYFFTQKALE
                     EKQIPIMTFSADNIQEGLTIIAGNAFPDTHEEIERALELGLPVIRYHKFLGQLIDGYT
                     SIAITGSHGKTSTTGLLSHVVGAIRPTSYLIGDGTGSGTKGAEYFALEACEYQRHFLA
                     YKPTYAIMTNIDWDHPDYFKSVDDVFNAFETLGKQVKKAVFALGDDAELRKLTLDIPI
                     IYFGFGEENEFQAKNVIKETTGTKFDVYHRGEFLGSFEIPTYGDHNVLNALSVIALCD
                     YEGLPVEDVKKELKTFEGVKRRFSITEKANQVLVDDYAHHPSEIRATVNAARQKYPDK
                     KVVAVFQPHTFTRTRTFLQGFADSLNLADEVYLCDIFGSAREKTGNLTIADLAHKTKG
                     NHIIKEEHTEELLKYPEAVILFMGAGDVQKFQAAYEKVLDHEVLTEADLKKSAIN"
     gene            complement(26105..28456)
                     /locus_tag="U0308_000539"
     CDS             complement(26105..28456)
                     /locus_tag="U0308_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEM2315553.1"
                     /translation="MGWFKDFFFGDMDEEIDTYEDTSSRKVEKKAKQRAPEVVPKSNV
                     TAIKTKERTIRNERPVAYKTVPKQKHMQPVKRQMKTQMVYQYPKGEFRFPLIPDKQKS
                     QPIQPKKQPITKRQAAETQPVKEETRKRPFTATDVPSPVYAFNKRPSKFEFAVTEAEE
                     LSTIQEDLTITPVDLLDSAEAETIAFDTELNRQIEEEIVSVPVTEEVITEQPEVKVTP
                     EPVEQQEPARVSLITEEPAQTKTTTRSKQVESNRQEQLLKSRIPFNVMMVKKDKQALR
                     KEEAQEINGQQPVEVEAEQTNTVREAQVATVSYPTNYEFPSFSLLHPPVSKREDDSWL
                     QMQQEMLDETLENFNVQASVVNRTQGPAVTRFEVQPEKGVKVSKITNLTDDIKLNLAA
                     KDIRIEAPIPGKSTVGIEIPNQTSRPVMLSELMNTEAFQSSTSPLTAALGLDISGTPI
                     ITDLQKMPHGLIAGATGSGKSVCINSLLVSLLYKATPDQLKLLLIDPKMVELAPYNRI
                     PHLVSPVITDAKAATVALKWAVEEMERRYQLFSHTGVRNMEKYNEYASHPDHIGEKLP
                     YILIVIDELADLMMVAPNDVEESISRIAQKARACGIHMIVATQRPSVDVITGLIKANI
                     PTRVSFSVSSQIDSRTILDASGAEKLLGKGDMLFLPSGASKPVRLQGTFVSDEEIDAV
                     VAHVRSQGEADYIFEEQELLVKETAKENTDELFEEACDFVLSQNAASTSLLQRHFRIG
                     YNRAARLMESLENHQIVSGINGSKPRDVIITKDQLAKLRNKES"
     gene            complement(28766..29383)
                     /locus_tag="U0308_000540"
     CDS             complement(28766..29383)
                     /locus_tag="U0308_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4479 domain-containing protein"
                     /protein_id="HEM2315554.1"
                     /translation="MIVNAFYNKEGVGDTLLIETGEVTFENREWERRGDVARIFDRET
                     KELAGYNIFNSSNYFNITANGKVDLTEELVAQMNQVIEKAGFEPEIVADLSPKFVVGY
                     VESKEKHPNADKLNVCKINVGDEVLQIVCGAPNIDAGQKVVVAKIGAVMPSGLIIKPS
                     NLRGEDSFGMVCAARELAIPDAPTEKGIMVLEESAVVGEAFPVNF"
     gene            complement(29389..30189)
                     /locus_tag="U0308_000541"
     CDS             complement(29389..30189)
                     /locus_tag="U0308_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1444 domain-containing protein"
                     /protein_id="HEM2315555.1"
                     /translation="MAKMTTLKMKEKLEKELQAPNRQFSYNRDNDTLTVAQNGKKVTL
                     TIPQIIANFENDGNAAVEKIVYYVEEGFRAAAGNVELENNKASIYPVVRATSFPDETK
                     AGEALLTDDHTAETKIFYAVDLGKSYRFIEESMLKKAQLTHKEIREVAFNNLANLEIP
                     LKKDSVNGNDFYFVRTNDGYDASRLLNEAFLREMREKLTGEMVLAVPHQDVLIIGDIQ
                     DNTGYDVLAHMTMDFFADGLVPITSLPFVYNNGKLEPIFIMAKNRLKE"
     gene            complement(30224..30535)
                     /locus_tag="U0308_000542"
     CDS             complement(30224..30535)
                     /locus_tag="U0308_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEM2315556.1"
                     /translation="MKKLESVEQFDAIKSEGKSVFMFSADWCGDCKFIEPVMPEIEAE
                     NEDFVFYHVDRDEFIDLCADLAIFGIPSFLAFEDGEEVGRFVSKDRKTKEEINDFLAA
                     I"
     gene            complement(30650..30868)
                     /locus_tag="U0308_000543"
     CDS             complement(30650..30868)
                     /locus_tag="U0308_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315557.1"
                     /translation="MREIIKKPVIVVGLFLLVASLVFLLGYVTDLPYFRDSELGWIWT
                     TMIAGIVTLFFGYFHDFLEKKKARSKVR"
     gene            complement(30861..31934)
                     /locus_tag="U0308_000544"
     CDS             complement(30861..31934)
                     /locus_tag="U0308_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HEM2315558.1"
                     /translation="MEKETLAMFKELTELQGTSGDEHRIRAFMRKELEPVSDEIIQDG
                     LGGIFGVRHGAEGGPRVLVAAHMDEVGFMVTRITENGLIRFQTIGGWNPQVLQAQRVQ
                     IMAPNGPVIGVVASVPPHLLSEAERSKPTDPKNLLIDIGADDKADAEKIGIKPGQFIV
                     PVAEFTPLANPKKILAKAWDNRYGVGLAIELMKELKGESLPNTLFAGANVQEEVGLRG
                     AGVSANMIKPDLFFALDASPANDTTGNKSQFGQIGQGFLLRIFDRTMIMHRGMREFLL
                     DTAETNKIPYQYFVSPGGTDAGKVHTSLSGIPSAVIGVPARYIHSSNSILHVDDYAAA
                     KEMITTLIRSLDKTTYETIKNNA"
     gene            32132..32443
                     /locus_tag="U0308_000545"
     CDS             32132..32443
                     /locus_tag="U0308_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEM2315559.1"
                     /translation="MNWKAFIAGVGAGAAAGHLVYHYLLSDKTISGDVILEKVKDAFK
                     QEGPIEGSWIQLKKQHYKKFAIDTFVYHGGITCIREGEKKQFEFIADANTGTIIDVYL
                     A"
     gene            complement(32480..32728)
                     /locus_tag="U0308_000546"
     CDS             complement(32480..32728)
                     /locus_tag="U0308_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensitive transcriptional regulator"
                     /protein_id="HEM2315560.1"
                     /translation="MEIEQKKALVTRFAKIEGHVRSIKTMTEEERDLETIMQQIAAVK
                     KAMDAAAKLIYTEQMKELIEQGETDEVVIKKKIDSFIR"
     gene            complement(32863..33714)
                     /locus_tag="U0308_000547"
     CDS             complement(32863..33714)
                     /locus_tag="U0308_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2315561.1"
                     /translation="MDSIQIGKIKIYWLRGGYTHFDGGAMFGVVPKPLWEKKYPANDK
                     NQLANVTDPMFFQYLGKNYLIDSGLGNRRLTEKQKRNYGVTEESFVLEDLAQLSIAPE
                     DIDFVLMTHLHFDHVLGLTGVSEEGSFYSIFPNAEIWTSKTEWEEMKHPNIRSKATYW
                     QENWQTIAGQIHTFTKEKEFNDAIKMTHTGGHSNGHSVVWIESDGEKAIHMADIFPTF
                     AHQNVLWVTAYDDYPMTSISAKQEIFKQTFGENYWFLSYHDARFRAVQMDGNGKIEAE
                     LKIEQRN"
     gene            complement(33775..34419)
                     /gene="trmB"
                     /locus_tag="U0308_000548"
     CDS             complement(33775..34419)
                     /gene="trmB"
                     /locus_tag="U0308_000548"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEM2315562.1"
                     /translation="MRVKHKPWAKDRLKEFPAIYIKNPEDFKGQWREVFGNDNPIHIE
                     IGSGKGQFISGMAKANPEINYIGIEMIESVLVSALDKAIEADVSNLRLVARDAKLLEE
                     CFEKGEIAQIYLNFSDPWPKKRHTKRRLTNPTFLTIYERLLPKAGEIHFKTDNRSLFE
                     YSLVAFSEYNMLLTFVSLDLHNSDYEGNIKTEYEEKFSAKGFPIYRLEAKFDRN"
     gene            complement(34426..35208)
                     /locus_tag="U0308_000549"
     CDS             complement(34426..35208)
                     /locus_tag="U0308_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEM2315563.1"
                     /translation="MKDNFFGREYDIAPAGGETGQAFVATHEDEKFFLKRNSSPFLAA
                     LSVENIVPKLVWTRRVENGDVITAQKWVNCHILTREEMVGPRVAKLLAKIHHSENLQH
                     MLAKIENCYFSADQLLSLIKVNTKANNELSKEIIAAIRYLEQNLSAAQTNDYVVCHGD
                     VNHNNWIISEENELFLVDWDGAMLADPANDIGMILYQYIPRKDWVSWLSNYGTTLTEE
                     LHRKLKWYTICQTVMQLITEHSNEANERAKQIFQNAIEDDEV"
     gene            complement(35420..36889)
                     /locus_tag="U0308_000550"
     CDS             complement(35420..36889)
                     /locus_tag="U0308_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEM2315564.1"
                     /translation="MNMKAASTSVKRNGILIVMLMGAFVTILNQTLMNVALPSIMKDF
                     GITASQGQWLSTGFMLVNGVMIPMTAFLIERFTTRQLYLFAMITFAIGTAIGGFATDY
                     TMLIAGRMVQAIGAGIVMPLLTVVVLNLFPMERRGRAMGLIGLAMNFAPAIGPTLSGW
                     IVQQYDWRNLFFIIIPFAILDIVVAIFLLKNVGKRTFPKLDILGVIMSTVGFGSLLLG
                     FSNAGDHDWLTWKVAGFIILGLVVLGIFIRYQTSNKAPLLNFRVFKYPTFALTTAISF
                     FVVMGLFGGMLLLPIFLQTVRGFSPLESGLVLLPGALVTAILSPVTGVMFDRFGAKYL
                     SLVGLIIMAGSTFMFTNLDESTTLTFIIIVQTIRSAGMAMVMMPLQTAALNSLPLKLA
                     SHGSAMFNTMRQVAGSIGTAALITVMSKSAASFATKLGPADVIGKTKTDIANHVLIHG
                     IETAFLVAGILSVVACVLALFIQKNRSAMDPIVTKTEKA"
     gene            complement(36886..37326)
                     /locus_tag="U0308_000551"
     CDS             complement(36886..37326)
                     /locus_tag="U0308_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2315565.1"
                     /translation="MDEKLVKEVIFSFREVQRKTHHVLAEEAANREITTTQLLAIREL
                     QKESELTLGELAERMKLGKSTVSGIVDRLVKAGFLKRTRNESNRRALSLELTEKGATK
                     AAETYHVFFNRLEPILEIGEERLKEMLEMHREIITILEREGARD"
     gene            complement(37548..38417)
                     /gene="dat"
                     /locus_tag="U0308_000552"
     CDS             complement(37548..38417)
                     /gene="dat"
                     /locus_tag="U0308_000552"
                     /EC_number="2.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino-acid transaminase"
                     /protein_id="HEM2315566.1"
                     /translation="MKVLVNNHLVEREDATVDIEDRGYQFGDGVYEVVRLYNGKFFTY
                     NEHIDRLYASAAKIDLVIPYSKEELRALLEKLVAENNINTGNVYLQVTRGVQNPRNHV
                     MPDDFPLEGVLTAAAREVPRNEQQFVQGGPVITEEDVRWLRCDIKSLNLLGNILAKNK
                     AHQQNALEAVLHRGEQVTECSASNISIIKDGVLWTHAADNLILNGITRQVIIAVAKKN
                     GIPVKEADFTLTDLREADEVFISSTTIEITPVTHIDGVQVADGKRGPITAKLHQYFVE
                     EIVQACGELEFAK"
     gene            complement(38530..39942)
                     /gene="pepV"
                     /locus_tag="U0308_000553"
     CDS             complement(38530..39942)
                     /gene="pepV"
                     /locus_tag="U0308_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepV"
                     /protein_id="HEM2315567.1"
                     /translation="MTEINWQKEVESRKDDFLEDLKGLLRIPSVRDDSKKTEDAPFGP
                     DVKRALDYMIELGKKDGFTAKEVGNVAGHLEYGQGEELVGVLGHVDVVPVGDGWTNGP
                     FEPTLRDGKLYARGVADDKGPTIAGYYALKIIKELGLPLSRRVRIIVGSDEESGMSCV
                     ERYFETEEQPTLGFVPDAEFPIIHAEKGISELDVSFKDGEASGEAAFRLLSVESGERY
                     NMVPDHATAILEDVKDFDKVASAFKTFLANHPVEGTLEENGKSVKINIVGKSAHAMEP
                     NNGVNAGLHLVAFLGKFKLTGAANDFVTFGRDYLFGDSRAVKLGISYEDEESGELTMN
                     VGVIRYDVAEGGKYGLNFRYPVTANMDKLKNKMQTVVYEYNAQYTHYEDSKPLFVPKD
                     HPLIQVLQEVYTKQTGEEATLLAIGGGTYARHMETGVAFGALFPGREDTMHQKDEFSY
                     FDDLLKATAIYAEALYKLAK"
     gene            complement(40017..40430)
                     /locus_tag="U0308_000554"
     CDS             complement(40017..40430)
                     /locus_tag="U0308_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEM2315568.1"
                     /translation="MKPIYPAVKAVIVKDGKFLALKKKGVEGEVFELPGGRMNYGETH
                     GEALFREVYEETKLQVQPFILYDTWEFFHEDFQISGVIYLVEMPEGGEIELSDEHEEY
                     RFLPLEKESLNVMDIVFSSRMERWDFEAIKGFMRK"
     gene            40535..41365
                     /locus_tag="U0308_000555"
     CDS             40535..41365
                     /locus_tag="U0308_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEM2315569.1"
                     /translation="MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMA
                     AEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDYENISSLSEQISQFDTILIGPGL
                     GLDAYAEEIFRLVLEKSTEQQQVIIDGDGITIYAKGENPHPAAKLTFTPHAGEWERLK
                     VLAPDAVTPTDVALAIDATIVLKGHRTKVYSGESAWQNMYGTPAMATGGMGDTLAGTI
                     CGLMAQTEKPITGTLAAVFLHSYIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA
                     "
     gene            complement(41403..42056)
                     /locus_tag="U0308_000556"
     CDS             complement(41403..42056)
                     /locus_tag="U0308_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEM2315570.1"
                     /translation="MKKTPFIISGIALLGFIFFMTGVMTGAKWIQHFDDYWNSIIRVG
                     ITNTKTTVISYLTDIGGVATICILTAVIVVIFVVIRKVDMAIWFGGIVLIGGALIPSI
                     IKNIVQRPRPTYKLIEQGGFSFPSGHSTGSTVFYGMLAFLLILYVSRRWLRFTIGILA
                     FGLVIFIMYSRVYLGVHFPSDVVAGFLIGNAALFSGIGCYFIWNQKLALWASRFKKA"
     gene            complement(42066..43679)
                     /locus_tag="U0308_000557"
     CDS             complement(42066..43679)
                     /locus_tag="U0308_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEM2315571.1"
                     /translation="MGSKLLRGTFILTLGTLISKVLGILYVIPFYAIIGGDEPALLYN
                     FGYVPYQLFLSIATAGIPLAVAKYIAKYNAMEEYAVGRRLFKTGVYLMIFSGIVCFLA
                     MYGLAPTLARMQQLEGGYSLADGIQVIRAVSFALLIIPVMSLLRGFFQGYNSMGPSAV
                     SQVLEQVVRIMFLLAGTFIVMYVLDGNVVTAISIATFSAFVGAFASLLLLLWYFYKRK
                     PGLDRMLLEDRGTVKISIPTLYKDIILSAIPFIIVGSATSLYQLIDQFTLGRVLEYIG
                     ITPELVNSYVAIINFDVQKLIMIPGTLAIAFSMALVPLVTGAYVRKEYAQVKRQLNDV
                     FQILLFLTIPACFGIAMLARPLFTVFFSPSDNGTALLQLFAPIAILFSLFSVSAAVLQ
                     GIDEQRFTVLGLLLGLLAKSVLQMPLIMLFEAKGSIIATGIGYAVSCIFMLLIIKKYV
                     RFSFKVILRRTVLFFGMTALMGLVVIALYIMMSNFVSTDRKIPALMITIVCGGVGAIF
                     YGYMAFKLHLSDKLFGPRGTRLREKLRIR"
BASE COUNT        12685 a         9343 c         7371 g        14410 t
ORIGIN      
        1 tatgttacaa caatacgaaa gagttttagt agcagttgat ggatccaaag aagcagaaag
       61 agcattccaa aaagcaattc aagtggctaa ccgtaatgac gcggcgcttg gtctggtaca
      121 tgttatcgat acacgcgcgt tttcatctgt agccaattac gatacaagca tggcagacaa
      181 agctaccgaa tatgcagatg aattacttag tggctataaa gaagatgctt taaaagccgg
      241 tgtaacaaaa gtagaaagct acattgagta tggttctcca aaaacagcta ttacaaaaga
      301 agcagcaaaa gcattccaag cagatttaat catgtgtggt gcaactggac ttaacgctgt
      361 agaacgtttg ttaattggta gtgtatctga gtatattatt cgccactccc cttgtgatgt
      421 tcttgtagta cgtaatgatg ttcctgatta taaagaagaa aaataaggat agaaaaaaag
      481 gctagctctt aattaagagc tagccttttt tactttttta gtgattgttt ttaattgttt
      541 ctacatcacg agcaatcatt aattcttcgt ttgtaggaat gatgataact tttactgggg
      601 agtgcggata gttaaggaat ctttcttctc cgcgcacttg gttaagtgct ggatcccagt
      661 atacgcccat gaattcaagt ccacgaagta ctttttcacg gatgtatgaa ctattttcac
      721 cgataccagc tgtgaagata atggcatcta caccgttcat gcgagctgca taagaaccaa
      781 tgtatttatg gatacggtca acgaaaactt gaagtgcaag ttctgcgcgg tcgtttcctt
      841 ttgctgcttc atcttctaaa tcacgaagat cgcttgaaat accagatacg ccaagcatac
      901 cagattcttt gtttaacaca tcaagtactt gttctgcagt tttgccagtt ttttccatga
      961 tgaaaggaat aagcgcaggg tcaatgttac cagaacgagt tcccatagaa acaccagcta
     1021 gtggtgtgaa tcccatggaa gtatccattg attttccgcc ttcgattgca gcgatactag
     1081 caccattacc aaggtgacaa gttagtaaac gtaattcttc tacaggacgt cctaaaagtt
     1141 ctgcagcgcg ttcggataca tatttgtgac ttgtaccgtg gaaaccgtat ttacggatac
     1201 catagtcttc atagtagctg tatggcagac tgtatagata acttgctgga ggcattgttt
     1261 gatggaaagc tgtatcgaaa acagccactg aaacaacatc tggtaaaatc ttgcggaatg
     1321 ctttaatacc agtaacgttc gctgggttat gaagcggcgc aagttcagat agagcttcaa
     1381 tatctttaat tacttggtca tcaatataaa cggattcagg gaatctttct ccaccgtgaa
     1441 caacgcggtg accaattcca gtgatttcat cgtaagaacc gataactttg tggttaatta
     1501 atttttcaag tagcatttga acagcaattt catggtcagg aatatcaata atttctttga
     1561 ttttttctcc gtctacagta attgtaaaaa tagaatcttt caaaccaatt ctttctacaa
     1621 tccctgctgt gataacacgt tcagatggca tatcatataa ttggaatttc agtgaagaac
     1681 ttccggcgtt aattgcaatc gttttttcca ttttgttttt gtcaattcct tccattatcg
     1741 tttccttttg aaccagttct ctatttcagc taaaatcggt gcagttacgc tcggatctgt
     1801 tagcgaagag agattggcca ataaaacttc ttttggcggc tttacatcta cgtccgcttt
     1861 ttgtaaaatc aagatgcttt ttcgtgcttg ttcagactta aacagtgttt caggcaattt
     1921 aataattccc tcaatatgac cgtttttctt gataaacttg tccaccttag caaagtcact
     1981 agtcccaaac attgcgtcag gtaccaagaa gaataaatat cctcctggct ttgtgtagcg
     2041 cattccttgt tctataaaca agaaatgtgc aaatgaatgc ccttcttcac ggcaaagttc
     2101 aaatgttttt gcattttcgt catccggata atacccaaca ggtaaatcac taattacgac
     2161 atctacggga tcaactaata aattagccag cccatcttga tgcagcaatg tcattttttg
     2221 tcgctgtaaa tccgctccta ctagtgcaag cgaaataagc aaatcatcta catctacacc
     2281 acttgcatga acgtctacat caccttttaa ttctagctga ttaatcactg ttgttaaaag
     2341 gtttgcagtg ccacaggctg gatccaagat agaaacattt ttcttctttt gaatcacttt
     2401 ttcaagcaaa tatgccacaa tgaaaccaat ggaatctggc gtcatttggt ggttcacttg
     2461 aataccgtgt ttcatgcctt ttagtagtgc taattgaaga cctttgcgga tttcttcatt
     2521 cgagaaattc tcaagttcga tactttcgta agacgcttgt aatttcaatt gtttttcaga
     2581 agacaactct tctttttgta aaacttcttt ttgaaacaga ttttctcctg tttcataaac
     2641 cgcttccaaa tagcttattt caagttcatt ttgcaagata atagctgtat tatcaagcac
     2701 ttgaaataat tcttgcgttg cttcatttgc caaaagtaac acctcgaatt ttcatcatta
     2761 ctaacaccac caaacattat acagtatttc taaagaatgt gaaaggattt tatgtagtaa
     2821 aagatgaaat tctcattgga aatagttcat tatcattagt acagtttatt tttagtagta
     2881 atacagaaaa aagccctcct aactaaagga aggcttttac gatttaagct tttttggctg
     2941 cttctatcgc tgcttcataa ttcggatgat cgctaccttc tggaactact tccgtgtaga
     3001 cgatttcccc tgctgcattt accacaaaaa cagaacgagc tagtaagcga agttctttca
     3061 tgattacacc gtatgcttca ccaaaagaaa gatcgcggtg atcagataat gtaatcgcat
     3121 ttggtaaacc ttctgcggca caccatttct tttgagcaaa tggtaaatca acggagatag
     3181 ttaagacaac tgtattatct aaattgcttg cttcttcatt aaatttacgc gtttgtgtgg
     3241 aacaaacact tgtatcaatg gaaggaacaa cgctgataag tctcactttc ccgtcataat
     3301 cgtgcaatgt tacttcttct aaatctctat tcaccactgt gaagttcggc gctttgtcgc
     3361 caacttttct ttcggtacct acgagtgtaa ctggattatg tttaaatgtt acttgagtca
     3421 ttttttcttc ctcctttaat ggacgcttct attccatttt aaagaagaag tttgctataa
     3481 gctatttttt tgctccattt acccattttt catctagttc taagtagccc gtgtggacga
     3541 cagatgtgga ttcaaaaaag tccgcaatgc cttgtttgtt tggtgtaaag gcacaaacca
     3601 catataacgg ccaaattgtt tttaagacaa aacgcatcgc accttctcga aataaaacgg
     3661 ttaaccaagt taatttttcg ccatcaagtt tcactacgcg aagaccaaat aacatttttc
     3721 caagcgtttg tccgaaaaac ttagtaagca gaataaagta agctaaaaag ataatcgttg
     3781 tcattcccca ataaaatgtg aagaaactgt catccatccc cattccagaa acgcggaaaa
     3841 tcggattaat aatgattccc ttcaaggctg cgatgacaac taaatcgact aaataagcta
     3901 aaaaccggat ccaaaagcca gcaaagtact gtttaggaat ggcttcttct ttctgaattg
     3961 gtggttcata atgatagact tggcgtttac tttcaaaagc aacattttca ttagccattt
     4021 gcgcctctcc tctcacatta ttctccatat aaatacatca ttcttggcgc tttaagtgta
     4081 ccagttaatt taattagttg agaaatatcc gcattttgac cggaaatttt ttgtgcagct
     4141 acagagaata gtgagctaaa atctcccggt gcatcatatt ggataactgt tgcaccagct
     4201 aagccttgtt cttttttcaa agcttctagg gcatcttctt gataaccaaa ttcatcaatc
     4261 aatccgttct cttttgcttg gcggccgtcg tatatgcgac catctgcaat tttacgcact
     4321 tgttctacag tcattccacg gccctgtgca actactttaa cgaactcatt ataagaatca
     4381 tcaatcattg actgcataat cttcttctcg tcttccgtca ttggtcttgt cccgctcata
     4441 atgtctttat attcgccact tttaatggta ttatctgaaa cacctaattt tttcatgagt
     4501 tcactatagt catacccttg cataatgacg ccaagcgagc cggtcaatgt ttctttactt
     4561 gcaaaaattt tgtcggctgg cgcggaaata taatatccac ctgatgctgc catactcccc
     4621 atggaaacat agaatggaat attgcgttct ttttgaattt gtaaaatttt atcacgaatt
     4681 tgcgcggatt ccatgacacc gccacctggt gaattaacat acaaaagtac accttgaata
     4741 ttgtcatcat ttctaacttg ctctaattgt tgcataaaaa aagaatgatt gtagccagcc
     4801 tcactaaata aggaacctga atctcccgta tcttgaatag tgccatctac agataataca
     4861 gcaattgtat cattcccgcc ttcttcaatt actgtttcgg ttagttcgcc ggtatctgcg
     4921 aataggcttt cgacaaatgt cggactacta tcttcctttg aagcgatttg acttgatgta
     4981 aactttgcta acgcactaac taacaaaagt gcaaaaacaa tccctagtgc aatccatctt
     5041 ttagcgttca tttatttctc ccctttttct gattagataa tgtaataata acagcctctt
     5101 ttattttgta caatctttct cttaaattgt gtcccatttc acttttttac ttatgatgaa
     5161 agaaattgct ctgaagtcat gttataataa gtttgttgat taaaattgga ttctggaggg
     5221 acaactaaca tggcaaaaac tattttttat ttttcctatc gaaaaacaga agaactacat
     5281 gcaaaagcaa aagaattgaa gaaaattacg acggattatg gatatgaatt aacggatgac
     5341 tatcaaaaag caaacgttat tatcagcatt ggtggtgatg gtgcttttct taaatctgta
     5401 agagaaactg gcttccgtca agattgttta tatgcaggga ttgcgctaac agagcaatta
     5461 ggtcaatact gtgacttcca tattaatcaa ttggatgaaa tcatcaaagc agccattgaa
     5521 gatcgttggt tagtacgtcg ttacccaact atttatggaa cagtgaataa taccaaagca
     5581 ttttatgtac taaatgagtt taacattcgt tcttctatca ttagaacgct tacgatggat
     5641 ctttatatta atgattctca cttcgaaact ttccgcggag atggcatggt tatttccaca
     5701 ccaacaggaa gtaccgctta taataaatca gtgaacggtt ctatcgtgga cccacttctt
     5761 ccatctatgc aagtaagtga actggcttct attaacaata acaaattccg cacacttggt
     5821 tcttcgttca ttcttagtcc aaaacgcaaa ctacgtattg aaattgcgtc tgaagaagga
     5881 aataacgaat tcccgatgat tggaatggat agcgaagcac ttagtatcca acacgtgcat
     5941 gaagttaatt tagaagtagg cgatcgtttt atcaatatta tcaaactgcc taaaaattct
     6001 ttctgggata aagtgaaacg taatttctta taataaaaaa gtctggcact tacgccagac
     6061 ttttttattt tgcttccaag atggctgcta gtaatgcttt ttgtgcatga agccgatttc
     6121 ccgcttgttg ataaatgacc gagtgattgc catcaatgat ttcagctgtc acttcttctt
     6181 cccgatgtgc tggtaagcaa tgtaagaagt ggtaatcagg cttggcacca ctaactaatt
     6241 ctgcatttac ttgatatttt tcgccaaaat ccgccaaacg tttcgcattt tcatcttctt
     6301 gccccatact tgtccaaaca tccgtataaa taaagtccgc atcagtcact gcaagttttg
     6361 gatcttctgt aacgaaaatc ttgccaccac tttgcttcgc cagattttct gcctttgcaa
     6421 gaattgtttc gtcgacctca tacccttttg gcatcgcaag gcgaatatct atcccgacca
     6481 tagcgccggc taaaagcaat gaatgacata cattgttacc atcaccaata taagctagtt
     6541 tgacaccttc caactgatct ttccattcat aaatagtcat taaatccgct aacgcctgac
     6601 atggatgatg caggtcggtt aagccattaa taattggaat ttctgcatga tacgccaatt
     6661 cttctacttt ttcatgacta aatgtccgaa tcataattgc atcaatatat tctgacatca
     6721 catgcgccgt atctttaatc ggttcaccac gcccgatttg caattccttt gaactcatca
     6781 ctatcgcttg tccacctaat tgcagaatcc cggcttcaaa agaaacccgt gttctagtag
     6841 aaggcttgtc aaagatcatt cctaaaattt tcccgcttaa aatatgacta taatgagctg
     6901 gattcgtttt cattgcaaca gctaatttaa tgatatctgt caattcttct ttattccatt
     6961 caagcaaact gagcatatct ttcccagctg tattattttt cgcatacatt gtcatccctc
     7021 ttcactccca atcaattggt tttccaaaac acttttcaat aaatatatgg cttgatcgat
     7081 ttctgcataa ctgacggtta aaggtggtaa gattcgtagc acattagccc ccgcagttag
     7141 tattagcaat cctttatctc taagttccgt tacaactggt tctgcggtat tttcaagttc
     7201 tatacctatc agaaatcctc caccacgaat gacagaaaca ttatccaacg cctctaaatg
     7261 cacttctaac aaatatctaa aatagtctgc tttggcattt acctcttcta aaaatcccgc
     7321 ttgtttcatt gttcgtaata tctctttagc cgccgcaagg gccaatttat ttcctccaaa
     7381 agtagagcca tgacttcctg gcccaaaagc actacttaga ttcgcttttc cgaccatcgc
     7441 tccaatcggc aagccatttc caagcccttt tgctaaagtg aaaatatctg gttctaaacc
     7501 aatctgctca aatccataaa gcgtccccgt tcgcccaagc ccagtctgca cttcatcaat
     7561 aattaataat acccccattt ttttgcaaag caattgaacc tctaaaagaa aggctgcatt
     7621 tgctgggatg acgccacctt ccccttgaat tacttctaac atgactgctg ctgtatgttc
     7681 atcgatttct gctcggaaag cctcgatgtc attataaggg acgtaagtga agccaggaac
     7741 aagtcccccg aacccttgat gaattttagc ttgggctgta gctgacatcg aaccaaaagt
     7801 acgtccgtgg aaagattttt caaaggtaat tattttttct ttcccggtat attttctagc
     7861 taatttgagc gctgcttcat ttgcctctgt tccgctatta caaaagaaaa ctaatctgtc
     7921 tttaccatct gcaattaatt ctgcgacact atcttgcaaa gcacattcat ataaattcga
     7981 tgtgtgccaa atattcgtta gttgttgttg tactgcttct gcaacatttg ctggacaatg
     8041 accaaggtta caaactgcga taccgctagt gaaatcgaga tatgttttac catttttatc
     8101 tgttacaacc gtgcccgtac cgttaactaa atcaatagga aaccttttgt atgttggaaa
     8161 aacatgtttc atccaatcgc caccttgttt tttatttttg ttccgctagt gttaagggaa
     8221 tctgtaataa taacttttcc gacaccgttt tcggcagcaa aggcagcgct agctaattta
     8281 ggaatcattc caccttttat tacgccggca ttttgcagct tttctatttc atctgtggct
     8341 atttcgccaa taatttctga accttttttc acaccaggta catctgttag taaatagagt
     8401 gcttctgctt gaagtgcgct tgctacttca caggcggctg tatctgcatt gacatttagc
     8461 caatcgtatt cactgtttat accaagcggc gcaatcacag tgataatatt ttcgctaagt
     8521 aattgttcga ttaaatctgt ctttactttc gttatttttc cgacaaatcc caaattcgcg
     8581 tcgttcaaaa aatctgcttc tagtaaccct gtatcacccg catttaaacc gataaccgaa
     8641 atattacgtt tttgaaaagc agtggtaata gctggttgga cttggccaat taaaaccatt
     8701 tttgtcactt caagagtcgc tttattagtg acacgtagac cattttttgt ttcgacagga
     8761 atagcaagag atttcatcat ttttgtaata taatgcccgc cgccatgaac aagtacaatt
     8821 tttttattgg cagcttgcca ttgtattatt tgttggaaaa aatcttctgt taaattgtca
     8881 cttgcgacac cgcctagttt tacgactatc gtattctcca tcctgattcc tccttacgtc
     8941 cggtagcatg cgttaatttt gacgtattca taactcaagt cgcaacccca tgctgttcct
     9001 gactcaagtc cgatatgaag atcaacgtcg ataatgatat gctcttcttc taaataggca
     9061 tctaacgcct gttgattaaa aatggtttgg ctgctatgat tcagaatttc aatcccgcca
     9121 attttaatcg taatattatc tggcgcaaac cggccacctg aatagccaat cgcgcaaata
     9181 atacgtcccc agttcccatc tccaccaaaa gctgccgtct tcacgagact agaggaaaca
     9241 atttttttag caatcattct tgcatcttct gtttttgtag cgccattaac ttgtacctcg
     9301 attagttttg tcgctccctc gccgtctcgc gcgatgcttt tagcaaggtg ctccgttacc
     9361 gcttgaaaca tatccgcaaa tttcgcaaaa tccgctgtcc cttcctgaag catcgagttt
     9421 tctgcacagc cattcgccat gactaccacc atatcgttgg tagaagtatc gccatctacc
     9481 gttatttgat tgaaagtttt gtctactttt atttttagta atttttgcaa taattcagcc
     9541 gggattgcgg catctgttgt aataaaagca agcattgtcg ccatatttgg atgaatcatt
     9601 cctgatccct tcgctacacc tgacatcgtt acctttctac caccaatttc tgtttgaaaa
     9661 ctgatttgtt tttgaaacgt atctgttgtt aaaatcgctt cttcaaaatc ggccgcattt
     9721 ccagtttgct tttctagcat ttctattccc gcgttgattt tgtccatcgg tagcatatcg
     9781 ccaataattc ccgtggaagc aacggctacg taatcaagtg gaatatctaa cttttctgcc
     9841 gtttgagccc gcatcgcaag tgcatctaac ataccttgat tccctgtaca tgcattggca
     9901 ttcccactat tcacaataat tgcttgtaac ttcgcattac tttgaaaaga atctttcgtt
     9961 acaaaaattg gtgcggcttg catttgattc atcgtataaa cagcggctgc atttgctgga
    10021 acttctgaat aaatccaacc aatatcattt cgttttcttt taagccctgc atgttttccg
    10081 tcagcataaa atccttttgg tgaagcgata tttcctttga caagttccat tttatttttc
    10141 ccctttcacg gatacaccgg aataaacctt aatccgtcac tttcagcaaa attcgccatt
    10201 atgtttaaat tttgaatggc ctgaccagcc gcccctttaa ctaaattatc aatcacagaa
    10261 acgatagtaa tcacattcgt tttttcatta taagcaagac ctatatcaca gtaattcgat
    10321 gctgtcactt gtttgacagt cggatataca ttttctggtt ggattcggac aaatggagca
    10381 ttctcgtagg tggatttgta aagcgtatgt aactcttttt gggtgatagg atttttgggt
    10441 ttaacgtaga tggttgtgaa gatgcctctt gtgatgggaa ttaacgaagt agaaaattga
    10501 attgctggga tagtctcatc ccatttagtt aattgttgca taatttctgg aatatgttga
    10561 tgagaattca ttttataaag tgtcatgttt tcattggttt ctgtaaaatg agtacttgca
    10621 gagggcactt ttcctgcgcc ggaaatacct gatttagcgt ctacgataat cgatgttgga
    10681 tcaatcaact ggcttatcac tagaggtgct atacctaaca atgttgcagt tgcataacat
    10741 ccaggattag caatgaatct agcttctttc ttatcacgga attctgctaa accatattcc
    10801 gccttagcga tatactcgat tggagccgcg ctttttccat accatttttc gtaaagctgc
    10861 ctgtctttta atcgaaagtc cccggataga tcaatgacat tcaaacctgc atctacatat
    10921 gggagagcaa tatctttcgc gattccagaa ggcgtggcaa taaaaacggt atcacttttt
    10981 tcgatgattt ctgctgaatt tattttctct aaggggctag cttctaaatc ttttaaatga
    11041 ggataaaagg ttgcaagtgt ttctgattga gcggaaaaac tatgtaacgt cgctatgtct
    11101 accgaagcat gttgatgaag caagcgaatt agctcaagcc ctccgtatcc tgttgcacca
    11161 ataatggaaa ctttcatcct aacccctccc gttaattatt aaatgatact tttcattata
    11221 atgatgtata tttataatgt caaatggttt tttattaata tttaaaacta ttttatgcat
    11281 ttttagttat ttattatgta tataatatac aaaaaccgtt tatccagaaa aggataaacg
    11341 gttaatctta aaataaatca gcaaactcat ctttgacttg tgcagtttcc gctacattca
    11401 cagaaatggt ttcaatgttg tctaatgctt tcgcaattaa cgcttcaaaa tctgtgaaac
    11461 tttcgtaatg ctcgatttta tctagttttg gttttgtttt tggagatggt ggcgtgaaaa
    11521 tggtacagca atcttcaaat ggttgcactg ataaattata cgtatcaatc ttttgcgcga
    11581 tttgaatgat ttcattttta tccatggata cgactggacg aatgattggt gtcgctgtta
    11641 cggcgttaat tgctagcata ctttccaatg tttggctggc aacttgccct aaactttcgc
    11701 cattaacaat cgctaaaccg tttctcctgc gacgaagttc atccgtaatt cgaagcatca
    11761 ttcgacgagt tacggtcata atcacacttt caggaatttg ttgtttgatc acttcctgaa
    11821 tctctgtaaa tggaacgatg tgcatttgta cctgtccgct gtatttagcc aattttgcag
    11881 ctaaatcaac cgccttttgt ttcgcttgtt cacttgtata cggtgggcta tgaaaatgaa
    11941 ctgcttcaat ttctacgcca cgtttttggg ctaaatagcc tgcaaccgga ctatcaatac
    12001 ctcccgaaag cattaacatt gcacgacccg atgaacctac tggcagacca gctgcaccaa
    12061 gaattgtccg gcatgataaa aatacgcctt ctttacgcac atcaatggtt agttttacat
    12121 caggattttt aacattgacc gttaaatctt ccatattttg taatacataa gcaccgattt
    12181 cttggttgat ttcattagaa tcaagcggaa actcgcggtg gctacgtctt gctgcgactt
    12241 taaatgttcc gttctcctca tgcgcatctt gtactaaggc aagtgcagcg gcttttactt
    12301 cctctacatc taaattgacg cgtacagctg gactaaagga ttggattccg aaaatcggtt
    12361 ttaaacgttc ttctgcgagc tgataatctg ccccatttaa aataatatac attcggtcac
    12421 gttctccgtg aatacgaact tccggcaaat ctgtcattgc acgtttgacg ttttgcgcca
    12481 actttgtcac aaattgtttt ctgttttttc cttttgtaga taactctccg tatctaatta
    12541 acatacgatc aaattccaat ttatttcacc actttattta gattttcaat gatttcttgc
    12601 agtttttgaa taaaaatttt cgcttcagat aaacgatttt catacgataa gctaacacgt
    12661 actgctcctg ttgcttcttc gtccgtcaca cccatcgctt ttaacgtgct gcttgctagc
    12721 ttctgcttag aagaacacgc actagtggtg gaaatgtaaa tatcttcttt ttctaaagca
    12781 tgtactaaaa tttccccacg atgccctttt gccgaaaaac aaacgatatg cggagccgcg
    12841 acactttgtt tcgtatgaac tgtcatatca gacatttgcg caatttccgt tagtaaataa
    12901 tcgcgaatct cgattaatgc ttcttttcgt ggctcatttt cgagcgttag tcgtaatgct
    12961 tttgccagcg caacattccc agctaaattt tctgttccac tgcggtagcc catttcctgc
    13021 ccaccaccaa gaatttctga atgcaaatgc acattttttc gtttaaaaag tattccggtt
    13081 ccacgtagag catgaaattt atgccctgaa aaagtgagca aatcaatagc attctcatta
    13141 agtgcaagtg gtatttttcc gataccttga acgaaatcta catgaaagaa agtatgttca
    13201 agcaatttta gcatttcgcc aatttcgtgc agtggttgga tgcttcccac ctcattgttc
    13261 acgcccataa tagacactaa aatcgtttca tctgtgagtg cagctttcaa tgcttccatc
    13321 ttgatgacgc cgtttttatc tactggtaaa tacgtgacag taaaaccttc ctgctcaagt
    13381 tcttccatta ccatacgaac agaaggatgc tcgatgctag aggtaacaat atgtttcccg
    13441 cgattttggt aactataaac gagcccttta atcgccaaat tattcccctc tgtgccacca
    13501 gatgtaaaaa taatttcttc tggcaaagcg ctcaccatcg cagcgatttg ttttcttgat
    13561 gcatcaagca gctctttcga cttagcacca aaacgatgca gcgaagaagg attagcaaaa
    13621 taattactcg ctacctttgt atatgtttca agtacggccg catttggctt tgttgtcgca
    13681 ctattatcga aataaatcat aaaaactaaa ttctcctccc caatattcca ctctccattt
    13741 tatcataatt ccaacacttt ccaactacta ttttcataaa aaaacaggat tcctattata
    13801 aaaatagaaa tacctgtttt tacgttttta ttcaatatcg tcgacgctta cttttgattc
    13861 atacgctttt tcgacttttt taaatgctcc tgtttccact ttttccagcg cggttacagc
    13921 aatttctaat gcttttttat actgataatc attgtagaaa tggttttctg cttgaacgag
    13981 ttcatctgca agttctttgt tacgcaatcg atagcggtta gcatattgga taacatgctc
    14041 aactaagcga acattctcca tcatttcctc ggctttttca gttaaatgag ttaaatcttc
    14101 ttctgcaata cgccaatctt ggcttactgc tttcatattt agcggtttct cttccaaacg
    14161 tttctcaagc gcattaatgg attcccccat atgctctcgt agcgataaat actcttctgg
    14221 aagacctggc aaacgttctc gttccatttt gcgatctagt gtaataattg cacgacgcat
    14281 ccgttcagca tcatcacgcg cttctagttc atctttacgc aaagaacgca attcttcagc
    14341 gaatttgtcc tgctcagcgc taatcgtaat aagcgctgca tcaatttctt tcaatgtatc
    14401 ttgcgctgcc gagtaggcaa tctcaccact agcaattaga gcagttaatt gttcaaagtt
    14461 ttcttttgct tcactcaatt tagcgctcgt ttttaaataa accgctagat catcttcagc
    14521 aacatgatag gtttgtttta cttctgtaat ttgttcagca agtgcatctg aaacggcatt
    14581 ttggcgttgt aacttgtcag aagttgggct atgattttct ttcacgaaat ggcgagcttc
    14641 tgcttcgtgt tcaagcgtat cataaaacaa atcgatttca ttatgtaatt cttctactcc
    14701 ttgttccgct tcatctaaat caagattaat tacatttttt ttcattttat caatttgatt
    14761 tttcatgcga gaaatctctt tatctaactc catttgagct aaataataac cttttcgcac
    14821 catttcttca tagccagcgc gaagtttagt catttcttct ggcaaaatgg tatctgtttc
    14881 atgcagtaat gacgggattc gctccatttg cgcttcgatt acttgcattt ctttttgaac
    14941 cactataacg atttctcgtg cctctaaatg atcaccttgg tcagttaatg aatcatagct
    15001 atttaagctt tctgacagtt cacttagttt tgtctcaata tatggtaacg tttctccaag
    15061 tttaaatcct cttgtcaaaa cttctcggcg caactccgca aatttttctt tcgtggcacg
    15121 actttctttg gcattttttt cttcactaat aagtagctct tttagtccac caagaatttg
    15181 atccatttgc ttttcaatta caacgagcat ttgctcaata tcattttcag cgtgtgtagc
    15241 agaacggaac ttgtaacggt ccgtgttcat ctctgcttct aataacactt cttctaaatc
    15301 aggaaataat ctagtttcaa tttcatccca ggacgaacgc catgattcaa aaagcgcttc
    15361 tgtctgacct gttagtttta attttttcac ttttgaaagt tcatcaataa ccggccgctc
    15421 tctgagttta atctttttct cttctaactc gtttattctt tggtaatgtt ttctttttaa
    15481 tatgtagcct gcaccaatga ctgcaataac tacgataata aagccgatta acatgtagta
    15541 catccaaaat cctcccatca acgttaactt gtgaaagaaa aacagccaca ctcgtgctgc
    15601 tcatacatct tttcaattat gtacatcttt ccatatgtag tatattttat tcctcatttt
    15661 cagttcatta tacacatctt ttattttacc acgatttgcc tagaattact tgcgtttaac
    15721 gaaaaaattt ttaaagcaaa taaaatctat tctattacaa aacaaatttc ccgaaatccc
    15781 ttgtcgttca tgctatacta aagacattat ttgaaaagaa atgtggggat aaaaaaatga
    15841 ttgaaatcaa aaaaatgacc ggaacaaaag aagaaaatta tgcacttgct ttaaaacaag
    15901 tacaagcaat gattgctggc gaaccaaatc taattgcgaa tctaagtaat gtttcttcta
    15961 tattaaatca agcactttct gatattaatt gggttggatt ttatttactt gaaaaagaaa
    16021 caaatcaatt agtactcggc cccttccaag gtttgcctgc ttgcattcgc attccactag
    16081 gtaaaggtgt gtgcggttct gctgcctcag atcaaaaaac gtatataatc gaaaatgtgc
    16141 atgatttccc tggacatatc gcctgtgatg cagcttctaa ttcagaaatc gttctaccaa
    16201 ttgtaaaaaa taatcaactg cttggcgtgc ttgatattga tagtcccctt tttaatcgtt
    16261 ttgatgaagt ggaccagtta tggctagaaa aaatccgtga tgcgattact caagaaataa
    16321 attgacaagc tactagtaac tatactatac tggaagatgt gtaaaatgca gcttgagtaa
    16381 aatgaatgag tgtgttgttt acccccagat gtaattctgt ggtatatcac gtaaccggcg
    16441 gctgctatgg tgatggtata tgaaggtaaa ctgccctgat ttggttttac gtcacgtttg
    16501 ttttatacca aaaacaaata aaaggaggag tctcttatgg ctcgttatac aggtccaagc
    16561 tggaaagttt cccgtcgttt aggaatttca ctttctggaa caggtaaaga attagagcgt
    16621 cgtccgtatg ctccaggtca acacggccca actcaacgta aaaaaatctc agaatatggt
    16681 ttgcaacaag ctgaaaagca aaaattgcgt catatgtatg gattaactga acgtcaattc
    16741 aaaaacacgt tcaacaaagc tggtaaatta caaggtaaac atggtgagaa cttcatgatc
    16801 ttactagaac aacgccttga taacatcgtt taccgtcttg gtcttgctcg cactcgtcgt
    16861 gcagctcgtc aactcgtaaa ccatggccac atcactgtag atggcaaacg cgtagatatc
    16921 ccttcttacc aagtatctgt tggtcaagtg atctctgttc gtgaaaaatc tgctaaaaac
    16981 tctgcaatcg ctgaaagctt agaagtttca agcttcgtgc ctgaatacgt aactttcgat
    17041 gcagaaaaac taactggttc tcttaaccgt ctaccagaac gttctgaact tgctgctgaa
    17101 atcaacgaag catttatcgt agaattctac agccgttaat tagagctaaa aaccttacaa
    17161 tgcatgactt cggttgtgtt tgtaaggttt ttttatgcac aaaaaagcac tcgtctttaa
    17221 aaacgagtgc tttccctatt atttataaga aactaagaag tattttttct tcccgcgtct
    17281 cacaattgta aatttatttt caatccggtc acttgcatcc atgatttttt ctaaatcttg
    17341 ctgacgttcc ccattaatgt aaatagctcc atttgcaaca tcttcacgcg cttgacgttt
    17401 ggaaggttcg ataccaagtg ttactaacca atctaccaag tttgcttccg tatcttctgc
    17461 aacaaatgtc ggaacgtctt tgaagccttg ttcaatttca tccgcagtca gcgcttttac
    17521 atcaccacta aatagtgctt ttgaaatttt aagtgcttgt tccaacgctt cttcactatg
    17581 cacaaatttg gtcatttctg ccgctaacgt tttttgtgca gctcgtaaat gcggttctgt
    17641 ttctacttgt tttgctaact catcaatttc tgcttctgtt aggaatgtaa agtacttcag
    17701 gtatttcaca acatcacgat catctgtgtt aatccagaat tgataaaact catatggcgt
    17761 tgttttttct ggatttaacc aaattgcccc gccttctgat ttcccaaatt tcgttccatc
    17821 agcttttgtt aaaagaggaa ttgttaaacc gaaagctttg gcattttcgc cttgtttttt
    17881 acgaatcaaa tcaagtccag cagtaatatt cccccactgg tcactaccac caatttgcaa
    17941 acggcaatca ttaaattcat ataagtgatt aaagtccatc gcttgtaaaa tttggtaagc
    18001 gaactccgtg aatgaaatcc ctacttctaa acgactagca acgatatctt ttgaaagcat
    18061 cgtgttcacg ttgaattctt ttccatagtc acgcaagaaa tcaaggatac tcacatcttt
    18121 tgtccaatca tagttgttca ccatgctcgc cgcagaatta ccttcaaaat caaaaatctt
    18181 tccaagttgc acgcgcaaac tttccacatt tttactaatt tgttccattg attgtaactt
    18241 acgctcttcc tttttaccac tcggatcgcc aatagttcct gtcgctccac caactaaaat
    18301 aatcggacgg tgcccagcgt tttggaaacg gcgtaaaatc atgaatggaa ttaaatgacc
    18361 aatatgcatc gagtctccag atggatcaat cccgcagtac aaagaaatct gtttttcttc
    18421 tacccatttg cgtaatcctt cttcatctgt ttgctggtaa atagctccgc gccactctaa
    18481 ttcatcaata atattcattt tcatcattct ccttttattt ttggacataa aaaacgcccc
    18541 tccgctaaac agtttagcga agggacgtat taattaacgt ggtaccaccc tacttttagg
    18601 aataaatcct acttcaaaaa ataacggctc aacaccggct gcgccattat cctgcgcagc
    18661 gtgactccgg gatgtaattc gtctacttac ctctactagt ttccaccaac cactagctct
    18721 ctaggaataa gaataagcaa ctacttcgtc cgttcatagt cattttcgtt atgaaaagta
    18781 tacatacatt tataacatac cgttaaaaat gctgtcaact tatttttttt ctttagtcgt
    18841 accacgtagt ttttcactat gtggtaagat aactgttttt tcatctactt cttcactcgt
    18901 catcaacttt gttagtagac gcatagccac ggcgccgata tcgtataaag gttgtacgat
    18961 tgtcgaaagt tgcgggcgtg acattaatgt taatttcgta ttgttgcttg tcattacttc
    19021 taagtcttct gggactttga ttccagcatc aagcgcggca ttcaaaatac caatagctag
    19081 ttcatcatct gcaactacca ctgcatttgg ttttttagac aaggcactta attctgccca
    19141 aacttttaca cctgcattgt agttatattt cgcttcaata atgtagtctt cttgataaga
    19201 aattccagct tcttctaatg cttctttgta accagctaat ttcatttcgc gattgaccgg
    19261 ctcgtttaga gaaccactta caaaagcgat ttgcttatga ccattatcta caaaacgttt
    19321 caccgcttct tttgttgctt gtttgtaatc gatgtttaca gaagcaaatt tattttccat
    19381 atcaacggct cctgctaaaa ctactggcgc tggagaacgg tcaaattctt cttgtaattg
    19441 ttctgaaata cgttcgccca tgtaaataat tccgtccact tgtttaccaa gaagcgtgtt
    19501 aagtacttga agttctttat cctcattttc gtccgaattg ctgaggataa tgttgtattt
    19561 atacattgtc gcaatatctt caatcccacg agcaagctct gcataaaaca cgttagaaat
    19621 atctggaata ataacaccaa ctgtagttgt acgtttgctc gctaggcctc tagctacagc
    19681 attaggacga taccctaatt gattaataac atctagtact ttttttcttg ttactggttt
    19741 aacattcgga ttgccgttca ctacccgaga taccgttgcc atagaaacat tcgcttctct
    19801 tgcaacatca taaattgtta cattcatctc tattcactct ccatattcat tattttaatg
    19861 gctctaccta ccattgtaaa cgtaaacaaa ctagccttcc tttaataata cgataacttt
    19921 tttcgatatg caattgtttt tactctttat tttcatttat tttcatatca aaacggcatt
    19981 attacacaaa attaaatgcc gatagaatat gagttgttaa tagcaaaaca aaaaaccttg
    20041 gaatcccaag gttttttgat gttactttat tttatgtggt actaaattac ttgctaaaat
    20101 tgcattccag aattcttcaa attcaggaat atccatttgt tgtgcagaat ccgataatgc
    20161 aactgcagga tctggatgaa cttcagccat cacgccatct gcctcgatag ctagagcagc
    20221 ttttgcgcat ggaagtaata aatcttttcg accagtagaa tgcgtcacat caaccataac
    20281 tggtaaatga gtttcttttt tcaaaattgg aacggcagaa atatcaagtg tatttcttgt
    20341 cgctttttca tatgtgcgga tacctcgttc gcataagatg attttgccat ttccttgtga
    20401 catgatatat tcagcagcac caatgaattc ttcgattgta gcagataaac cacgttttag
    20461 taaaatgggt ttgtccacac ggccagccgc ttttagtaat tcgaagtttt gcatgtttct
    20521 tgcaccaatt tgaataacat ctacataatc aagtgcaact tcaatatcag ccggcgtaac
    20581 gatttcacta ataacaccta aaccgtattc atcagataca cgttttaaaa ttttcagtcc
    20641 ttctaaacct aatccttgga agtcatatgg gctagtacga ggtttaaatg cgccgccacg
    20701 aataagtttt aagcctttcg ctttaatgga ttcagcgacc gcagcaacct gttcataaga
    20761 ttccactgaa catggaccga aaacaaatac tggttcgcca ttcccgattg gcaatccttt
    20821 tactgtaact atcgtatctt cttttttgtt ttttctagaa acgagtaatg ctttagagtg
    20881 atcttcttct tgaagctcta atcccgcttt aaaaatttct ttaaataatt tttgaaccgt
    20941 actatcttca aaaggtcctt catttgctgc aagaatcgtg ttaagcattt ctctttcacg
    21001 taatggatca aaacgaagag aaccttgagt tcctttaatt ttgccaattt cttgtaccaa
    21061 attagcgcgt ttgctaatta attctagcaa atcaatattt aattgatcca cctgtgttct
    21121 aagttcctct aaatttgtat taaccattta acttccaccc ttctaaaaat ctgctccaag
    21181 attatttctc attatagagg aaaacagata atttgtcacg aatccacttt tatacttaat
    21241 cgcttttaag cattaaagtg aataatgtaa aactaatgtt aacatgtttt aaatcaaatt
    21301 acaagcagat aatgtatttt ttcctaataa aaaaacagcc ccgtaaggct gttttttgaa
    21361 ctaagtttat tttacttctt tttttacgtc agaagcaatt tttttcgctt cgtctttgcc
    21421 ttcatctact gctttttttg cttctttttt cgctttgtca gctgcttttt ctacatcgtc
    21481 cgcagcgtct tttgcttcat ttttcacagc gtctgccgct tgtttcgcag cttcttggtt
    21541 ttcttctttg ttttgtgaaa caacttcttt cacggctttg ctttgtttag aaacagtatc
    21601 tgctaattta ccggatttgt ctttcactac atctacaaat ccaccagcag aatcaactaa
    21661 tttatctttt gttcctttgg ctacaccact gatttcgata cctttttcat aagcaacatc
    21721 tttccattgg ttgccttttt ctttaattgt atcaacttgt gtatttaagt cctcgcgtag
    21781 ttctttacct gatttaggtg caaatagaag tgctgcggct gaaccaacga ttgcaccaat
    21841 taaaccaccg attagaaaat cttttgtatt aataccatct ttttctgcca tgttaaatcc
    21901 ctccaaatta tattagaaat tagattgttc tgctgcttct tttgctgctt ctttcgctgc
    21961 tttatttgct ttcatctttt ctctaaaaga aagaattgaa ttgctaattg agacagcttg
    22021 agaaatcttc gcttcgtttt gctctacttt gtttgttgcg agtgttgcta gttcgcgaac
    22081 agattgactt aatcctagta aagaagtccc aatgtcacca actgcatcaa aaactggatc
    22141 cactttcgca actttgccat ttacatcttc tagaagtgta ttggtcttat caagcaattt
    22201 ttgtgattgt cctgtaatcc cttgtacttc tactgttatt ttttctaacg atttagctac
    22261 ctcatccatt gtttgggaag ttgattttaa cgtttttccc aagtagatgg caataactaa
    22321 aagcgcaatt gcggcaataa gcgctgcaat atacaagatt actatcatct atccacacct
    22381 ccatattcct ttttctatac cctgagtatt cccctctaaa actttcttct ctaatgatct
    22441 atgtacaaaa tacaaaaaag aaaaggtatt agcttcattt tagcaagtaa ctgccgaaaa
    22501 ataaactaat aagaaagaaa ccggttaatt tgttgtagaa ggttgctttt agcgtaattt
    22561 ggagtaaaat agatacaggc tgctttttgc ctatttttag ttaaaattta gggaggttac
    22621 aagatgagag acgcaagaat cgaaaaatta gcacataatt tgattaacta ttccgtcaaa
    22681 cttggcgctg gagaaaaagt attaattgaa aacttcggtg ttcaaaaaga attagtgatg
    22741 gctttagtag aagaagcata caaagctggc ggtttcccgt tcgtttcctt aaaagaacca
    22801 caaattgacc gcgcgatgat gctcggagct gatagttccc aatatgcaaa aattgctgaa
    22861 ttcgaaggca acgtgatgaa agaaatggat gcttacatag gtttacgtgc tggcgataac
    22921 atcaatgaaa catccgatgt cccagcagat aaattgaaaa tccacggaga aacagttggc
    22981 aaaatgcatt ctgatattcg tgtgaaacaa acaaaatggg ttgtacttcg ctatccaagt
    23041 tcctccatgg cgcaacttgc caaaatgagc actgctggtt ttgaagattt ctactttgac
    23101 gtgtgtaact tagattacgg aaaaatgagt gacgcaatgg atggattagt agaactaatg
    23161 aataaaacag ataaagtaca cttagttgga ccaggaacag atttaacatt tagtattaaa
    23221 gatattccgg caattaaatg tgctggcgaa atgaatatcc ccgacggtga agtatttact
    23281 gcaccagttc gtgattctat caatggaaca cttacttata acacaccatc tccttaccaa
    23341 ggctttacgt tcgaaaatgt atctttcacg tttaaggatg gaaaaatcat cgaagcgact
    23401 gcgaatgata cagctcgtat taacaaagtc ttagatacag atgaaggcgc gcgcttcgtt
    23461 ggcgaattcg ctattggggt taacccattc attcacgaac caatgcaaga tattcttttt
    23521 gatgaaaaaa tcgaaggaag tttccacttt acgcctggtc aatgttacga cgaagctttt
    23581 aatggcaacc aatctgctat tcactgggat ttagttaaca ttcaacgtgc cgattacggc
    23641 ggcggcgaaa tttactttga tgaagttctc attcgtaaag atggtatttt cgtccttcca
    23701 gaattagaag cacttaatcc agaaaactta gtataaaaaa aagacgctta ggattaattc
    23761 ctaagcgttt tttagtttaa acaattgttt tttcaccggg ttgccagttg attgggcaca
    23821 gtccacctgt ttgaagagct tgtaaaactc ttaaaacttc atccacttcc cgcccgatat
    23881 tattatggtg caccacttcg tactggattt caccttttgg attgataatg aaaagaccgc
    23941 gcaatgctac gccttcttcc tcaattaata caccgtaatc actagctact tgatgattcg
    24001 tatccgcagc gagtgggtag tttaatctac caataccacc ttctttaatc ggtgtattcg
    24061 tccatgcaag atgcgagtga attgtatctg tagaagcgcc aattatgcgg gcatttaatg
    24121 catcaaattc atctgaccga gcggaaatag caacaatttc tgtcggacaa acaaatgtaa
    24181 agtccattgg atagaaaaag agaatcgtcc atttatcgtc ttctatattt ttttctagac
    24241 ttactttccc aaaagtctga tttggcataa cagcttccat ttcaaatctt ggagcttgtg
    24301 tgcctactaa acgttctgcc acttttatcc ctccattaat tatgtagttg tattttgtat
    24361 cacatgatat attttaatac acctaagaaa tactgtaaag ctttatttat actaattaca
    24421 aacaagaaaa aagcacgcca acgaatcggc atgctttatt tagttattaa ttaatcgcgc
    24481 tttttttcaa gtcagcttct gtcaaaactt catgatcaag tactttttca taagcggctt
    24541 ggaatttttg aacgtcccct gctcccatga ataaaataac agcttctggg tatttcaaaa
    24601 gttcttctgt atgctcttct ttgataatgt ggtttccttt tgttttgtgc gctaaatcag
    24661 caatcgttaa attccctgtt ttttcacgcg cggaaccaaa gatatcacaa agatacactt
    24721 catccgctaa attcaagctg tccgcaaaac cttgtaagaa tgtgcgagtt cgcgtgaatg
    24781 tatgcggctg aaaaacagca actacttttt tgtcaggata tttttgtcta gcagcattta
    24841 ctgtagcacg gatttctgat ggatggtgcg cgtaatcatc tactaatact tgattagctt
    24901 tttctgtaat actaaatctt cttttgacac cttcgaaagt ttttaattcc tttttcacgt
    24961 cttccactgg tagaccttca taatcacaaa gtgcaataac acttaaggca tttaatacat
    25021 tatggtctcc gtaagttgga atttcaaacg aacctaagaa ctcgccgcga tgatacacgt
    25081 cgaattttgt tccagttgtt tctttgatta catttttagc ttggaattcg ttttcctcgc
    25141 caaaaccaaa gtaaataatc ggtatatcta aagtaagctt acgtaattca gcatcgtccc
    25201 ctaaggcaaa tacagctttt ttcacttgtt tacccagtgt ttcgaatgcg ttaaatacat
    25261 catccacgct cttgaaatag tctggatgat cccaatcaat attcgtcata attgcatacg
    25321 taggtttata agcaaggaaa tgacgttgat attcacacgc ttcaagtgca aaatattccg
    25381 ctccttttgt cccgcttcca gtaccatcac cgattaaata agaagttgga cgaatcgcac
    25441 caacaacatg cgaaagtaaa ccagttgtcg acgttttacc atgagaacca gttatcgcaa
    25501 tacttgtata gccatcaatt aattgaccta aaaatttatg atatcgaatc accggaagcc
    25561 caagctccag tgcacgctca atttcttcat gtgtatctgg gaatgcattc ccagcaataa
    25621 ttgttaggcc ttcttgaata ttatcagccg aaaaagtcat aatcggaatt tgcttttctt
    25681 ctaatgcttt ttgtgtaaag aaatatttat ccacatcgct gccttgcact tggaaacctt
    25741 tatcatgcag gatttgagca agtgcactca tccctgaccc ttttattcca acaaaatgat
    25801 agatagtcat tatttgaacc cccattaatt tatcttgaag agggtgccta aaaaaaacat
    25861 gttaactgtt aagcaccaag tcttaacttt gaaaacagta taaagtctcc gttttctaga
    25921 catcatctta cgttctaatt gtgttttatg tttgaattct agttgagtca ataattcacc
    25981 agcttattat atcactttcc atgtaaatag aaaaatcttt cagcgaatat aagcgaaatt
    26041 actcatgaaa atagccatta tttgtaaaac taattaagta atatgttagt ttagtactac
    26101 aaaattaaga ttctttgttt cgcaacttag ctaattggtc ctttgtaata ataacatctc
    26161 gcggtttgga accatttatc ccagaaacaa tttgatgatt ttcaagggat tccattaatc
    26221 tcgccgctcg gttataacca attctaaaat gtctttgcaa caaggatgtt gaggcagcat
    26281 tttggcttaa aacaaagtca cacgcttctt caaataattc atcggtattt tcttttgccg
    26341 tttcttttac aagtaattct tgttcttcaa agatataatc ggcctcgcct tgactccgaa
    26401 catgagcaac aactgcatca atctcttcat cactaacgaa ggttccttgt aaacgcactg
    26461 gcttacttgc accacttggt aagaagagca tgtccccttt tccgagtaat ttttctgctc
    26521 cgcttgcatc taaaatcgtt ctagagtcga tttgagaaga tacagagaac gaaacacgtg
    26581 tagggatatt cgccttaatg agacctgtaa taacgtctac agatgggcgc tgtgtcgcta
    26641 caatcatatg aatgccacaa gctcttgctt tttgtgcgat gcggctaatg gattcttcta
    26701 catcatttgg cgcaaccatc atcaaatcag ctaattcatc aatcacaatt aaaatataag
    26761 gtaatttctc ccctatatga tctgggtgac tagcgtattc attatatttt tccatattcc
    26821 taacgcctgt atggctaaat aattgatagc gacgttccat ttcttctacc gcccatttta
    26881 aagcgacagt agctgctttg gcatccgtaa taactggact cacaagatgt ggtatccggt
    26941 tgtacggagc taattcgacc atcttagggt caatcaaaag tagtttcaat tggtctggcg
    27001 ttgctttgta aagtaaactt actagcaatg aattgataca aacacttttc cctgaccctg
    27061 tagctccagc gattaaaccg tggggcattt tttgtaaatc agtaataatt ggcgttcccg
    27121 agatatctag cccgagtgcc gctgtgagcg gtgatgtaga tgactgaaaa gcttccgtat
    27181 tcatcaattc agaaagcatt acgggacgac ttgtctgatt cggaatttct atccctactg
    27241 tactcttacc aggtatcggc gcctcaatcc gtatatcttt cgctgctaaa tttaatttaa
    27301 tatcatccgt taaattagtg attttgctaa ctttaacgcc tttttcaggt tgcacttcaa
    27361 atctagttac tgctggacct tgtgtacggt taactacact agcttgtacg ttgaaatttt
    27421 ccaaggtttc atctagcatc tcttgctgca tttgtagcca tgagtcgtct tctcgtttgg
    27481 agactggcgg atggagcaaa ctaaacgacg gaaattcata gttcgttggg taagagactg
    27541 tcgctacttg cgcttctcga acagtattcg tttgttctgc ttctacctca actggttgtt
    27601 gcccatttat ttcctgtgct tcttcttttc gaagtgcttg tttgtctttc tttaccatca
    27661 tgacattaaa tggaattctg ctttttagca attgttcttg tctatttgat tctacttgtt
    27721 tgcttctagt agttgttttc gtttgcgccg gctcttccgt tataagggaa acgcgtgctg
    27781 gttcttgctg ttctactggt tctggggtta ctttcacttc tggttgctcc gtaatgactt
    27841 cttccgtcac tggcactgac acaatctctt cttctatttg acgatttagc tctgtgtcaa
    27901 aagcaattgt ttccgcttct gctgaatcta ataaatctac tggagtaata gttaaatctt
    27961 cttgtattgt actaagttct tctgcttctg ttacagcaaa ctcaaattta cttggtcgtt
    28021 tattaaaggc ataaacaggc gaaggtacat ccgtcgctgt aaaaggtcgt tttcttgttt
    28081 cctcttttac tggttgcgtt tctgccgctt gtctttttgt tattggttgt ttttttggtt
    28141 gaattggttg gcttttttgt ttatctggaa ttaacggaaa acgaaattcg ccttttggat
    28201 actggtatac catttgcgtt ttcatttgtc gtttcactgg ttgcatatgt ttttgttttg
    28261 gaactgtttt gtaagcaact ggtcgttcgt tccttatagt acgttctttc gttttaattg
    28321 ctgttacatt tgattttggc actacttctg gtgctcgttg ttttgctttc ttttctactt
    28381 ttcgtgaaga cgtatcttcg tatgtatcta tttcttcatc catatcgcca aagaaaaaat
    28441 ctttaaacca tcccattcat tatcacccta aatttaattt tcttgtttga ttttaacaga
    28501 caaaaacaaa ataatctatg acaaaattgt gaattcgcct tttttcgagc catattcgtt
    28561 ataatacctt ggtaatagag ggttcaaacg tggtataagt ttttgttata aaggtaaaat
    28621 tgattcattt ttgtgcgatt tatgcatatt ttgtatacaa ttaacatttt atcgttctac
    28681 atttaaggcg ttttcacaat atctaataaa tagcaactaa aaaagcgccc gatatagcat
    28741 cagacgctca aaattaaaca tttatttaga aattaacagg aaaagcttct ccaaccacag
    28801 ccgattcctc cagaaccata atcccctttt ccgtaggcgc atcaggaatc gcaagttcac
    28861 gcgcagcaca taccatgccg aaagaatctt ctcctcgcaa attagatggt ttgataatta
    28921 aaccacttgg cataaccgca ccgatttttg caacaactac tttttgacca gcgtcaatgt
    28981 tcggggcacc gcatacaatt tgcaatactt catcccctac attgatttta catacattta
    29041 atttatctgc attaggatgt ttttctttcg attccacata accgacgacg aatttaggag
    29101 ataaatcagc cacgatttcc ggttcgaatc cagctttttc aattacttga ttcatttgcg
    29161 ctactaattc ctccgtcaaa tccaccttac catttgcagt aatattaaaa tagttggagc
    29221 tattaaagat gttatatccc gccaactctt ttgtttcacg atcaaaaatt cgcgctacat
    29281 caccgcggcg ttcccattca cgattttcaa acgttacttc gcctgtttca attagtagag
    29341 tgtcccctac cccttctttg ttataaaatg cgtttactat cacgttttct actcctttaa
    29401 tctgtttttt gccattataa atatcggttc aagtttacca ttattataga caaatggcaa
    29461 agaggtaatt ggtacaagcc catccgcaaa aaagtccatc gtcatatgag ccagaacatc
    29521 gtaacctgta ttatcttgga tatccccgat aattaaaacg tcttgatgcg gtacggcaag
    29581 caccatttcc cccgttaact tctcgcgcat ttcgcgaagg aacgcttcat tcaacaatct
    29641 actagcatcg taaccatcat ttgtgcgaac gaaataaaag tcattaccat taacagaatc
    29701 tttttttagc gggatttcta gattcgctaa attattaaaa gcaacttctc ttatttcttt
    29761 atgcgttagt tgtgcttttt taagcatact ctcttcaata aaacgatagg atttccccaa
    29821 atcaaccgcg tagaaaattt tcgtttcagc cgtatgatca tccgttaaca gcgcttctcc
    29881 agcttttgtt tcatcaggaa aagaagttgc acgtacaacc ggatagatgc tcgccttatt
    29941 attttccagc tcaacatttc ccgccgctgc ccgaaaaccc tcttccacat aataaacaat
    30001 tttttccacc gctgcattac catcattttc aaagttcgca atgatttgcg ggatggtcag
    30061 agttactttt ttaccatttt gcgcaaccgt tagcgtgtca ttgtctcgat tatatgaaaa
    30121 ctgccgattc ggcgcttgta attctttttc aagtttttct ttcattttta atgtagtcat
    30181 ttttgccata agtgcctccc cttccataaa aagcagtcac tttttatatc gcagctagaa
    30241 aatcattaat ttcttctttt gtttttctat ctttacttac aaaacgcccc acttcttcac
    30301 cgtcttcaaa cgccaaaaag ctcggaatac caaaaatcgc taaatcagca cataaatcaa
    30361 taaattcatc tcgatcaaca tggtaaaaga caaagtcctc attttccgct tcgatttcag
    30421 gcattactgg ttcgatgaat ttgcagtcgc cacaccaatc agcactaaac ataaaaacgg
    30481 atttgccttc cgatttaata gcgtcaaatt gttctactga ttctaatttc ttcatttcca
    30541 tacgctcctt ctaatctcat actagttaaa tcctaccgcc taacaaaact ttcgtccaga
    30601 ataacgctca tgaaaaaagt ccaaccccaa cgaaggagcc aaactttttt taccgtactt
    30661 tagagcgcgc ttttttcttt tctaaaaaat cgtggaaata cccgaaaaat aatgtcacga
    30721 tcccagcaat catagtggtc catatccaac caagctctga atcacgaaaa taaggcaggt
    30781 ccgtaacata gcctagcaag aatactaaac tcgccaccaa aaggaacaac cccacaacaa
    30841 ttactggttt ctttattatt tcacgcattg tttttaattg tttcgtaggt cgttttatcc
    30901 aaactgcgaa taagcgttgt aatcatttct tttgcagcag catagtcatc cacatgtaaa
    30961 atcgagttag acgagtgaat gtatctagct ggaacaccaa ttactgcact cggaatcccg
    31021 ctaagcgatg tatgcacttt cccagcatcc gttcctcctg gcgaaacaaa atattgataa
    31081 ggaattttat ttgtttccgc agtatctaat aaaaattcac gcatacctcg atgcataatc
    31141 atcgtccggt caaaaatacg cagtaagaaa ccttgaccaa tttgaccgaa ttgcgattta
    31201 ttcccagtcg tatcatttgc agggctagca tctaacgcga agaataaatc tggtttaatc
    31261 atgttcgcac ttacgcccgc accgcgcaga ccgacttctt cttgcacatt cgccccagca
    31321 aaaagtgtat ttggcaacga ttcgcctttc aattctttca taagttcaat cgcaagacca
    31381 acgccataac gattatccca tgctttcgct aaaattttct ttggattcgc aagcggcgtg
    31441 aattcagcca caggaacaat gaattgccct ggtttgatac caattttctc cgcgtccgct
    31501 ttatcatccg caccaatatc aattagtaag tttttaggat ccgttggttt gctacgttca
    31561 gcctccgaca acaaatgcgg tggaacagaa gcaactaccc caataaccgg accgttaggc
    31621 gccataattt gcactcgctg tgcctgtaaa acttgcggat tccaaccacc aattgtttga
    31681 aaacgtatta gaccattttc tgtaattcgc gttaccataa agccaacttc atccatatga
    31741 gccgcaacaa ggacgcgtgg accaccttcc gctccgtggc gcacaccaaa aataccacct
    31801 aagccgtctt ggataatttc atcggaaacc ggttcaagtt cttttcgcat aaaagcacga
    31861 attctatgtt catcacccga agtcccttga agttccgtta attctttaaa catcgctaac
    31921 gtttcttttt ccattaataa tcatctcttt ccgtctaaaa tctcttttat tatagcaaat
    31981 aatatccgtt tccgctcgct tcacttctct cttttacaga aagcgtgttc aaaaatcctt
    32041 ttataatcaa aaatttgtag tataatgatt aaaagagatg tttgtagtag catcttttaa
    32101 aaagaatagg aaacactagg gaggaaaagc gatgaactgg aaagctttca ttgcaggcgt
    32161 tggagcagga gcagcggctg gacaccttgt ttatcattat ttacttagcg ataaaacaat
    32221 ttctggggac gtcatcttag aaaaggtaaa agatgcattc aagcaagaag gaccaatcga
    32281 aggttcttgg attcaactta aaaaacaaca ttacaaaaaa ttcgcgattg atactttcgt
    32341 ttaccacggc ggaatcactt gtattcgcga aggcgagaag aagcaattcg aatttatcgc
    32401 agacgctaac acaggaacaa tcatcgacgt atatttagct taaaaaataa aaacgattcc
    32461 ccaagtgggg agtcgttttt tagcggataa aactatctat tttcttttta attaccactt
    32521 catctgtttc accttgttca attaactcct tcatttgttc tgtgtagatt aattttgcgg
    32581 cagcatccat cgcttttttc accgctgcta tttgttgcat aatagtttct aaatcacgct
    32641 cttcttctgt catcgttttt atagaacgta catgtccttc tatcttagcg aatcgcgtta
    32701 ccagcgcttt cttttgctcg atttccatat ataccccctt atagtatacc acacgacaac
    32761 cccctaccca ggatatcata ttggctattt taaagcgttt ataaatacaa ttataacaca
    32821 aaataaaaat accctcaaaa aaaagaagtg acttctcact tcttaatttc gctgttctat
    32881 ttttaattcg gcttctattt ttccatttcc gtccatttga actgctcgaa atctggcgtc
    32941 atggtatgat aaaaaccaat aattttcacc aaaagtttgt ttaaaaattt cttgtttggc
    33001 agagatagaa gtcattggat aatcatcata agcagtgacc caaagcacat tttgatgcgc
    33061 aaatgtcggg aaaatatccg ccatatgtat cgctttttct ccgtccgatt ctatccatac
    33121 aactgaatgc ccattactat gtccacctgt gtgcgtcatt ttaatcgcat cgttgaattc
    33181 tttttctttg gtaaatgtat gaatttgtcc tgctatcgtt tgccagtttt cttgccagta
    33241 tgttgctttt gaacgaatgt ttgggtgttt catttcctcc cattccgttt tggaagtcca
    33301 gatttccgca ttgggaaaga tggaataaaa actcccctct tccgaaacac cggtcaggcc
    33361 taacacatga tcgaagtgca aatgcgtcat caaaacaaaa tcaatgtctt ctggagcgat
    33421 agataattgc gccaaatctt ccagtacaaa cgattcttcc gtcacaccgt aattccgttt
    33481 ttgtttttct gtaagccgtc tgttccctag cccgctatca attaaataat ttttccctaa
    33541 gtactgaaaa aacatcggat cggttacgtt agctaattga tttttgtcat ttgcgggata
    33601 ttttttctcc cataaaggtt ttggtacaac gccaaacatt gcgccaccgt caaaatgagt
    33661 ataccctccg cgtaaccaat aaatctttat ttttccaatt tgaatggaat ccacttttaa
    33721 cgcctccaat taaaaataaa aaccagatgc agcagatgca tctggttatc cttgttaatt
    33781 tctatcaaat tttgcttcaa gacgatagat ggggaatcct ttagctgaaa atttttcttc
    33841 gtattcagtt ttaatattcc cttcgtaatc gctattatgc aggtcaagag atacaaaagt
    33901 taataacata ttgtattctg agaaagctac tagcgaatat tcgaacaaac tgcgattatc
    33961 ggttttgaaa tgaatctccc ccgctttagg tagcagtcgc tcataaatag ttaagaacgt
    34021 tggattcgtt agtctacgtt ttgtatggcg ttttttcggc catggatcgg agaagtttaa
    34081 ataaatttgt gctatttctc ctttttcaaa acattcttct agtaatttag catctctagc
    34141 aactaatcgt aaattagaaa cgtctgcttc aatcgcttta tcgagcgccg aaacgagcac
    34201 gctttcgatc atttcgatac caatatagtt aatttccgga tttgcttttg ccatgccact
    34261 aataaattga cctttaccgg aaccaatttc gatatggatt ggattatcat ttccgaatac
    34321 ttcacgccac tgacctttga aatcttctgg gtttttgatg taaattgctg ggaattcttt
    34381 caatctatct tttgcccatg gtttatgttt tacacgcatc tttctttaca cctcatcatc
    34441 ttctattgca ttttgaaaaa tttgttttgc tcgttcattg gcttcattcg aatgctcggt
    34501 tatgagttgc ataaccgttt gacaaattgt ataccatttt aatttgcgat gtaattcttc
    34561 ggttaatgtg gtgccgtaat tagagagcca acttacccaa tcttttcgcg gaatatattg
    34621 gtataaaatc attccgatat cattcgcagg gtctgcaagc atcgcaccat cccaatcaac
    34681 tagaaacagt tcgttttctt cagaaataat ccaattatta tggttaacat ctccgtgaca
    34741 aactacataa tcgttcgtct gagcagcaga gagattctgt tctaaatagc ggattgctgc
    34801 tattatttct ttcgatagct cgttattagc ttttgtgttt acttttatga gactcaaaag
    34861 ttgatctgca gaaaaatagc agttttcgat tttcgctagc atgtgttgca agttttctga
    34921 atggtggatt ttagctaata gttttgccac tcgcggtcca accatttctt cacgtgtcaa
    34981 aatatggcaa ttcacccatt tttgagcagt gatgacatct ccattctcta cgcgtctcgt
    35041 ccaaactaat tttggaacga tattttctac agaaagcgca gctaaaaaag gcgaagaatt
    35101 tctttttaaa aagaattttt cgtcttcatg tgttgcaacg aatgcctggc cagtttcccc
    35161 tccggccgga gctatgtcat attctctccc aaaaaagtta tctttcatct acatgcacac
    35221 cttttattag ctctttgcaa cttcattatc cctcgtttat ttcacttccg aacaaatagg
    35281 taactattca tgattttact tctcttagcc ttactagtca agtcaacata tgttcgttat
    35341 ctagattttt ttacaaattt actttattta cacaaaaaaa gtgcattcca tcaaaatgga
    35401 acacactttt ttcattattt tatgcttttt cggttttagt aacaattgga tccatggcac
    35461 ttctattttt ttgtataaat agtgctagga cacaagcaac tacagaaaga attccggcaa
    35521 ctaaaaaggc cgtttcaatt ccgtggataa gaacatggtt ggcaatatca gttttagttt
    35581 tgccaatcac atcggctggt ccgagcttag tagcgaaact cgcagcactt ttagacataa
    35641 ccgttataag cgccgctgtt ccgattgaac cagcaacttg acgcatggta ttaaacattg
    35701 ctgaaccatg agatgctagt tttaatggaa gcgagttgag cgctgctgtt tgcagtggca
    35761 tcataaccat cgccatccca gccgaacgaa tcgtttgtac aataataata aaagtcaatg
    35821 tagtagattc atccaagttg gtaaacatga aggtcgatcc cgccatgata attaagccaa
    35881 caagtgataa atatttagcc ccaaaacggt caaacatcac cccagttaca ggtgaaagta
    35941 tcgccgtgac aagcgcaccc ggcaagagaa caagccccga ttctagtggt gaaaatcctc
    36001 taacagtttg taagaaaatt ggtagtaata acatgccacc aaaaaggccc attacaacaa
    36061 agaaactaat ggctgttgta agcgcaaagg taggatattt aaatactcta aagttaagta
    36121 gtggcgcttt gttgcttgtt tggtaacgaa taaatattcc tagcactact agaccaagaa
    36181 taataaatcc agctactttc catgttaacc aatcatggtc tccagcatta ctaaatccta
    36241 ataataaact accaaacccg actgttgaca tgataacccc aaggatatcg agtttcggga
    36301 aagttctttt tccgacattt ttaagtaaga aaatcgctac gacaatatca agaatcgcga
    36361 aaggaataat aataaagaat aaattgcgcc aatcatattg ttgaacaatc caccctgaaa
    36421 gtgtcggacc aattgctgga gcaaagttca tagcaagacc aattaagccc attgctcgcc
    36481 ctcttcgttc catcgggaat aagtttaaga ccacaacagt aagaagtggc ataacaatcc
    36541 cagccccaat tgcttgtacc atacggccag caataagcat cgtataatct gtcgcaaatc
    36601 cgccaattgc agtaccaatc gcaaaggtaa tcatcgcaaa taagtaaagc tgacgcgttg
    36661 taaatcgttc aattaaaaag gccgtcattg gaatcatgac accattaacc aacataaatc
    36721 cagtcgataa ccattgccct tgactggctg taattccaaa atctttcata atacttggta
    36781 gcgcgacatt catcaacgtt tggttgagaa tcgtaacaaa ggcgcccata agcataacaa
    36841 tcaaaatacc attacgcttc actgatgtac ttgctgcttt catattcaat ctcgtgcacc
    36901 ttccctttct aaaatggtaa taatctctcg gtgcatttct agcatttctt ttaacctttc
    36961 ttcgccaatc tctaagatag gttctaaacg gttgaagaat acatgatacg tttctgctgc
    37021 ttttgtagct cctttttcag ttaattctaa gctgagtgcg cggcgattac tttcatttct
    37081 tgtacgtttt aaaaatcccg ctttcactaa tcgatctaca ataccagata cagtactttt
    37141 accaagcttc attcgttctg ctaattcgcc aagtgttaat tctgattctt tttgtaattc
    37201 tctgattgca agtaattggg ttgttgtaat ctccctattc gccgcttctt ctgcaagcac
    37261 gtgatgtgtt tttcgttgta cttcgcgaaa agagaaaata acctctttca ctaatttttc
    37321 atccatgact tccctccata ttgttcgctc ccaaatattt cgcatgcgaa ctattagcct
    37381 tttgaattat acacctccaa aaaaatttgt caatcgctta aaaccaggct tttcaaactg
    37441 aaagcggagc caatagcgta atttcaacgg ataaaaaagt tatataaatt tttacatagg
    37501 tgtcaagacg caaaaaaacc ttcctaaaaa aggaaggttt ctacttatta ttttgcaaat
    37561 tctaattcgc cacatgcttg aacgatttct tctacaaaat attgatgaag ttttgcggta
    37621 ataggtccgc gttttccgtc agctacttgc actccgtcga tatgggtaac tggggtaatt
    37681 tcgattgttg tgcttgaaat gaatacttca tcggcttcac gaagatctgt taaagtaaaa
    37741 tcagcttctt tgaccggaat accattcttt ttcgcaacag caataattac ttgacgagta
    37801 ataccattta agattaaatt atctgctgcg tgcgtccata acacaccgtc tttaataata
    37861 gaaatattgg aagctgaaca ctcagttact tgctctccgc ggtgtaaaac agcttctaac
    37921 gcattttgtt gatgtgcttt gttttttgct aaaatgtttc caagtaaatt caaactcttg
    37981 atgtcacagc gtaaccaacg aacatcttct tctgtaatta ctggtccacc ttgcacaaat
    38041 tgttgttcat ttcttggtac ttcacgagct gctgctgtta aaacgccttc cagcgggaaa
    38101 tcatctggca taacgtgatt acgcgggttt tgaacacctc gagtcacttg taaatagaca
    38161 tttcctgtat taatattatt ttcagcaact aatttttcaa gtaacgctcg taactcttct
    38221 ttagaataag gaataactaa gtcaattttt gctgcactcg catataaacg atcaatgtgt
    38281 tcattataag tgaagaattt tccattatat agacgaacta cttcatatac accatcacca
    38341 aactgatatc cgcggtcttc aatgtcaact gtggcatctt ctctttccac taaatggtta
    38401 tttactaata ctttcatctc aagtctctcc ttgcatagtt aatttttgga actatctaaa
    38461 aacttaatga aacaaagaaa ctgccgcaaa actaagcttt gcagcagtta attttttcaa
    38521 ttataaccct tacttcgcta atttgtaaag tgcttctgca taaattgcag tagcttttaa
    38581 caaatcatca aaatagctga attcgtcttt ttggtgcatc gtgtcttcac ggcctgggaa
    38641 tagtgcgccg aacgccacac cagtctccat gtggcgcgca taagttccgc caccaattgc
    38701 tagtaaagta gcttcttcac ccgtttgttt tgtatacact tcttgtaaaa cttgaattag
    38761 cggatgatct tttggtacga aaagtggttt ggaatcttcg taatgcgtgt attgcgcgtt
    38821 gtactcataa accactgttt gcattttatt tttcaatttg tccatattag cagttactgg
    38881 ataacggaaa ttaagtccgt attttccacc ttctgctaca tcataacgaa taacgccaac
    38941 gttcattgtt agttcgccgc tttcttcgtc ttcatagcta atacctaatt taactgcacg
    39001 ggaatcgccg aataggtaat cgcgaccaaa tgttacgaaa tcatttgccg cgccagtcag
    39061 cttgaattta ccaaggaaag ctactaaatg aagaccagcg tttacaccgt tatttggttc
    39121 cattgcatgg gctgatttac caacaatatt aattttaacg gatttgccgt tttcttctaa
    39181 tgttccttct actggatggt ttgctaggaa ggttttgaat gcactcgcta ctttatcaaa
    39241 gtcttttaca tcttctaaaa tagctgttgc gtgatctgga accatgttgt aacgctcgcc
    39301 tgattctacg ctaagtaaac ggaaagccgc ttccccgctt gcttcaccat ctttaaaaga
    39361 tacatctagt tctgagatac ctttttccgc gtgaatgatt gggaattctg catcaggaac
    39421 aaaaccaagt gttggttgtt cttctgtttc aaaataacgt tccacacagc tcataccgct
    39481 ctcttcatca gaaccaacaa tgattctaac acggcgagaa agtggtaatc ctagttcttt
    39541 aataattttt agcgcatagt aacctgcgat tgttggtcct ttatcgtccg caaccccacg
    39601 agcgtataat ttgccgtcgc gtaaagttgg ttcgaatggt ccgttcgtcc aaccatcacc
    39661 aactggtact acatccacat ggcctaaaac gccaactagt tcttctcctt gaccatattc
    39721 aaggtgtcct gctacgtttc caacttcttt cgctgtgaag ccgtcttttt taccaagttc
    39781 aatcatatag tcgagcgcgc gtttcacgtc tggtccaaac ggcgcatctt ctgttttttt
    39841 actgtcatcg cgaacactcg gaatgcgaag aagccctttt aaatcttcta agaaatcatc
    39901 tttgcgtgat tccacttctt tttgccaatt aatttctgtc ataattgtta ttccctcctt
    39961 caaacttatc ttctctattg taaactgttt ttacgtagct tggaagccgg aactccctat
    40021 tttctcataa aacctttaat tgcttcaaaa tcccagcgtt ccatgcgcga agaaaaaacg
    40081 atatccatga catttaaact ttctttttct agtggtaaaa agcgatattc ttcgtgttca
    40141 tcggataatt cgatttcgcc accttctggc atttctacca aataaataac accggaaatt
    40201 tggaaatcct catggaaaaa ttcccacgta tcatataaaa taaatggctg tacttgtaat
    40261 tttgtttctt cataaacttc tctaaaaagg gcttccccgt gcgtttcacc ataattcatg
    40321 cggcctcctg gaagttcaaa aacttctcct tctacccctt ttttctttag tgctaaaaat
    40381 tttccgtctt ttacgataac tgctttcact gcaggatata taggtttcat tttacaaaag
    40441 cctccttatc atttaagata aacatgattt atctgttctt tattttaccc ggttgagtag
    40501 ataaaagcca gtgtcataag gaggttttac aaaaatgaaa aaaataacac caaaagcaat
    40561 gtgcgcatgg attcctaaac gcgaagatga aacacataag ggtgactatg ggcgcgttct
    40621 gattgtcgct ggaaataaac aatttggtgg tgctgctatt atggcggcag aagcttgtgt
    40681 caaaagtggt gctggtttaa caaccgtggc ctccgatagt gtcaaccgac ctgctctcca
    40741 aacaagaata cctgaatgca tgtttattga ttatgaaaat atctcgagtc tcagcgaaca
    40801 aatcagccaa tttgatacga ttttaattgg tcctgggctt ggacttgatg cctatgcgga
    40861 agaaattttt cgtttagttt tagaaaaatc aaccgaacag caacaagtaa ttattgatgg
    40921 tgatgggatt actatttatg caaaaggaga aaatccccat cctgccgcga aactaacttt
    40981 tacgcctcat gctggagaat gggaaaggct taaagtatta gcgccagatg ccgtaacacc
    41041 aactgatgta gcgcttgcta tcgacgcaac gattgtttta aaagggcacc gtacaaaagt
    41101 gtattctggc gagtctgctt ggcaaaatat gtacggaaca ccagcaatgg caacaggtgg
    41161 tatgggtgat acgcttgccg gtacaatttg tggcttaatg gcgcaaactg aaaaaccgat
    41221 taccggcact ctagccgcgg tctttcttca cagctatatc ggcgaaattt tggctaaaaa
    41281 acgctatgtg gtacttccaa ccgaaattgc cgaagaatta ccgacttact tgaaaatttt
    41341 tagcgaaact gacgaacatg cttaataaaa aatcctccct ttttgaaaga gaggattttt
    41401 ttctatgctt ttttaaatct actcgcccat aatgctaatt tttgattcca aatgaagtaa
    41461 catccaatgc cactgaaaag tgctgcattg ccgattaaga atcctgcaac tacatcgctt
    41521 ggaaagtgca cccctaagta aacacgcgaa tacatgatga aaataaccag accaaaggct
    41581 agaatgccaa ttgtaaatcg aagccatctg cggctcacgt atagaattaa caagaaagca
    41641 agcataccat aaaataccgt agaaccggtc gaatgtccac ttggaaaact aaatccacct
    41701 tgttcgatta atttatacgt aggccttggt cgttgaacga tatttttaat aattgacggg
    41761 ataagtgctc caccaattaa aacaatacca ccaaaccaaa tcgccatatc tacttttcga
    41821 atgacaacaa atataacgac aatgactgct gttaaaatac aaatggtcgc gactccgcca
    41881 atatccgtta gataagaaat caccgttgtt ttcgtattcg taatgcctac acggataata
    41941 ctgttccaat aatcatcaaa atgttgaatc cactttgcac cggtcataac gcctgtcata
    42001 aagaaaataa atccaaggag agcgataccg ctaataataa atggtgtttt tttcatataa
    42061 tcctcctagc gaattcttaa tttttcacgc agtctcgttc cacgtggccc aaataattta
    42121 tcggataagt ggagtttaaa tgccatgtaa ccatagaaaa ttgcacctac cccgccgcaa
    42181 acgattgtaa tcattaatgc aggaattttc cggtctgttg atacaaagtt agacatcata
    42241 atataaagcg caataactac aagccccatt aaagccgtca tcccaaagaa aagtaccgtt
    42301 cgccgtaaaa taactttgaa cgaaaaacga acatatttct taataataag tagcatgaaa
    42361 atacaagata ccgcatagcc aattccggtt gcaataatgg atccctttgc ctcaaataac
    42421 ataatgagcg gcatttgaag aactgattta gccagtaaac cgagtaataa accaagtacg
    42481 gtaaatcgtt gttcatcaat cccttgaagg actgcagcag atacgctaaa taaggaaaat
    42541 aaaatagcga ttggcgcaaa aagttgtagt aatgctgtac cgttatcact tggcgagaaa
    42601 aacaccgtaa atagcggtct tgctagcatc gcaatcccaa aacaagctgg aattgttaaa
    42661 aataataaaa tttgaaaaac atcattaagt tgacgcttca cttgcgcata ttcttttctc
    42721 acataagctc ccgtcactag tgggacaagc gccatcgaaa acgcaatcgc gagtgtgccg
    42781 ggaatcataa tcaatttttg tacatcaaag ttaataattg ccacataaga attcactagt
    42841 tccggcgtaa tgccaatata ttccagtacc cgtcctaatg taaactggtc aatcaattga
    42901 taaagggatg tagcagatcc aacaataata aacggaatcg ccgaaagaat aatatcttta
    42961 taaagcgtcg ggatagaaat tttcacagtc cctctgtctt ctaaaagcat tcggtccagt
    43021 ccaggttttc gtttgtaaaa ataccaaaga agtaaaagta gacttgcaaa agcgccgaca
    43081 aacgcggaga aagtagcaat actaatagcc gttacgacat tcccatcaag tacatacatg
    43141 acaataaatg ttccagcaag taagaacata atccgaacaa cttgttctaa cacttgcgat
    43201 acagcagaag gtcccatcga attatatcct tggaaaaagc ctcgtagtaa actcattacc
    43261 ggaataatta gtaaggcgaa actaactgca cgaataactt gaatcccatc tgctaaacta
    43321 taaccgccct ccagttgttg catccgagca agcgttggag caagtccata cattgctagg
    43381 aaacagacaa tgccggagaa aatcattaaa tatacaccgg ttttaaataa acgtcgacct
    43441 acagcgtatt cttccatcgc attatatttt gctatatatt tagcaacagc cagcggaatc
    43501 cctgcagtcg caatgcttaa gaataattga tacggcacat aaccgaaatt atatagaagc
    43561 gctggttcat ctcctccaat aatcgcataa aacggaatca catacaatat tccgagcact
    43621 ttagagatta atgtccctag cgtcagaata aatgttcctc tgagcagttt tgaacccatc
    43681 gtctaacttc ctttacatta aattatatat ccttgtttac tttaccatta actcttttaa
    43741 aaaaaaagaa caaacccaaa taaatatcgg cttgttcttt acaaaaagtt taaatcaaat
    43801 gaagttttt
//
LOCUS       DASDYK010000009        38788 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.009, whole genome shotgun sequence.
ACCESSION   DASDYK010000009 DASDYK010000000
VERSION     DASDYK010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 38788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38788
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.009"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(99..1076)
                     /locus_tag="U0308_000558"
     CDS             complement(99..1076)
                     /locus_tag="U0308_000558"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEM2315572.1"
                     /translation="MKNNREKLLALFTESDGTYLSGQEIADSLGCSRTAVWKQMEALR
                     KEGFEIEAVRNRGYRLSATAEQYTKDALLLGLETKFIGQHLEIHESVSSTQIIAHQQI
                     ESSPEGTVIVADEQTAGKGRLLRPWSSKKGEGIWMSVILKPQIPIQKVPQFTFIASLA
                     ITEAIENSTKLEPKIKWPNDIYIGKRKICGVLTEMQAEAETIHAVIIGMGINVNQQEF
                     PEEIKDKASSLKLELGESVSRKALLQEILTSLEKYYELFLDKGFAPIKLLWETKAIPF
                     GEKLTASTTKGKIHGQVKGISDEGVLLLQDALGEVHSIYSADILLDNEK"
     gene            complement(1066..2247)
                     /locus_tag="U0308_000559"
     CDS             complement(1066..2247)
                     /locus_tag="U0308_000559"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEM2315573.1"
                     /translation="MNDVFLKALPVLQKLTTAGFEAYFVGGSVRDYLLNRTISDVDIA
                     TSAFPEEVKEIFQTSYDTGIAHGTVTVRENNEFYEVTTFRTEGTYEDFRRPSEVTFIR
                     SLEEDLKRRDFTMNAIAMDEHFALQDPFSGQLAIQNKEIKAVGKASERFHEDALRMMR
                     AVRFLSQLDFELDKETEKALESQIELLQHTSVERITVEWLKMMKGKAAKRAIELLLKV
                     KMETYLPGLKDEKSALSEFASWDWEKRTTEESIWLGLVVAVKPNNVNAFLKAWKLPNK
                     TIQLVNKAYQYALNMKETWLTEELYHAGKAVFSLVNELNVIRGQENNQHKVSQAYEAL
                     PIHSKKDLAITGADLLKWSGESAGPWVKETLDKVECGVLSNEINNEKIQIKRWLGYHE
                     E"
     gene            complement(2262..2666)
                     /gene="mgsA"
                     /locus_tag="U0308_000560"
     CDS             complement(2262..2666)
                     /gene="mgsA"
                     /locus_tag="U0308_000560"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HEM2315574.1"
                     /translation="MHIALIAHDEKKDLMVGFATAYKHLLEPHQLYATGTTGLRIIEA
                     TGLTVHRFKSGPLGGDQQIGARISENKMDLVIFLRDPLTAQPHEPDVTALIRLCDVYE
                     IPLATNIGTAEILIRGLGAGFLDWRDLRRNDE"
     gene            complement(2682..3473)
                     /locus_tag="U0308_000561"
     CDS             complement(2682..3473)
                     /locus_tag="U0308_000561"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEM2315575.1"
                     /translation="MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEI
                     VEFSSLDVPVFGNLSEMLEEIKPDCVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTP
                     EQISELRSIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAP
                     SGTAVKTAEMMAETREFVKQGAADEVELIEGARGAEYEGMRIHSVRLPGLVAHQEVIF
                     GAEGQGLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENILD"
     gene            complement(3470..3805)
                     /locus_tag="U0308_000562"
     CDS             complement(3470..3805)
                     /locus_tag="U0308_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HEM2315576.1"
                     /translation="MAKTMAEIQKEVDDFIGGFEEGYFSPLAMMARITEETGELAREI
                     NHYYGEKPKKTSEPTKTVAEELGDCLFVLTCMANSLDIDMEKAHDTVMAKFKERDKDR
                     WTKKEEKAK"
     gene            3946..4812
                     /locus_tag="U0308_000563"
     CDS             3946..4812
                     /locus_tag="U0308_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM2315577.1"
                     /translation="MLKTLRTKNICFIMLGTAIYAFGLVNFNIANNLGEGGLAGVTLF
                     LLHFFQIDPAYSNLILNIPLFILGWRVLGNRSLIYTGIGTVSLSLFLWIFQRIPYTLD
                     LHSDLLLVALFAGGFSGIGLGLVFRYGGTTGGSDIIAKLLNHTKGISMGRTLFAIDAI
                     VLVASLSYLDVRQVMYTLVAVFIGSRVIDFVQEGAYAARGALIISKDNDAIASHVMLA
                     MNRGVTVLEGRGGFSKKDQDVLYIVVAKNEIIQLKNIVQAIDPHAFVSVSVVHDVMGE
                     GFTLDENKNPIY"
     gene            complement(4802..5908)
                     /locus_tag="U0308_000564"
     CDS             complement(4802..5908)
                     /locus_tag="U0308_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEM2315578.1"
                     /translation="MQKIVIIGGGIVGASAAYLLSKENVQVTLIDSDEPGQATRAAAG
                     IICPWLSKRRNKYWYELAKNSAAFYKELAGTLEGDTGRNSGYKQVGVLALRKTEEKVT
                     ELFNLANERRLDAEVMGEIVKLSEEETKQKFPLVKPGFGSVYVSGAARVNGSLFCERL
                     LYAAKENGVKIKSGRAHFSTDGKVRVDGEDEHYDKLIIAAGAWLKELLDEASFHTEVL
                     AQKGQLLELDFSEFQTDEWPVILPPSAKSIVPFDNGKIIVGATHEKTAGFDTKPTVEG
                     KAEILTEVSQFMEGDLASKVAHVAVGTRPYTPDFAPLIGQLPGFESVFLANGLGASGL
                     TTGPYVGKLLADLALGNTVDLALENYEPSKYISR"
     gene            6228..7364
                     /locus_tag="U0308_000565"
     CDS             6228..7364
                     /locus_tag="U0308_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEM2315579.1"
                     /translation="MPNILDSLWNSMALFLSALFFHGMALRSIREKKPAWFQIKFSNE
                     IINYALGIYYGLLGVYFIIRGLPGTDSGIYTDMLLNILIVLHLFSSAGPATIALLLIV
                     AGKLFLGDALFANLIYAFLIIGFHFVCMEVAKLRLSSVQKVVLVKLSAIPLMLFYLHQ
                     KIHLLYTINDLPVWILYFLVSFFITFIIVSAAYYIDTSNKLIYDLQQSTILDPLTGLT
                     NFRHFEKAFEAAFNHATLKKSNLSVIIIDIDYFKRVNDTYGHLVGNGVLSTFSQMLLK
                     ISFPPNTLISRIGGEEFAIILPNINVSETEHLAEKIRRKVEKIDVPIVASGSVITISA
                     GIANYDGRNYPNPNELLNAADQALYNAKRNGRNQVHIRETEPVV"
     gene            7390..8517
                     /locus_tag="U0308_000566"
     CDS             7390..8517
                     /locus_tag="U0308_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEM2315580.1"
                     /translation="MFELVNSYIDSLALFLAILFIQGMSFRKIRQYRPNWFQNGGRRL
                     FLSILLGVYYGLAGIYFIYEGAYENNPVIYTNMRILILMVTSVFGGRVPLIFAYLVML
                     FGRISFDIASPVTSRYVILMTLIFAACLLVTFWKKQRFSRFVALIILNFPAILYYFVN
                     NFDEGRILQGFEIIEYFLLFFVTALLVFYACNYIDKSNLVIQNLTETAMTDSLTNLPN
                     MRFFTQQFGWIFAKSQKRKKSLSLFIIDIDHFKEINDFHGHQAGNTVLAQFSSILKNR
                     TFPPRTMFARIGGEEFAVLLQNVGTEQAALIADFFREEVERAKFPYNPASGKVTVSIG
                     VASASSNFSTTESLFEAADQALYQAKQNGRNQIAVHQGELE"
     gene            8514..9518
                     /locus_tag="U0308_000567"
     CDS             8514..9518
                     /locus_tag="U0308_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside transferase"
                     /protein_id="HEM2315581.1"
                     /translation="MKRFILIFILIILIGAGFFFFLRPEPKKTVSAPKETTPTSTSVQ
                     TYVKENYTAKNGLIVDYKNAQEPHYLAESIGLYMEYLVEVNDSKTFQEQVSHLEKNFI
                     TEDNFIKWEATDATTTNAIVDDFRITEALYQASEKFIFPSYKKMADKILANTKKYSAE
                     QGVPVDFYDFVHKKKADTLHLSYLNIQAMQQINYRDKAYLPIQTVNADPFFTEVFQNE
                     QFQYADPSEVNMIDQMLIAMAYFDENGDVEPNFDNFLQTELASKGKVYARYQRETKNP
                     SSENESTAVYAFLTQYFNKTNQAKNGKITKELLEKMDTSNPETTHFFDYINKEITLKK
                     "
     gene            9537..10220
                     /locus_tag="U0308_000568"
     CDS             9537..10220
                     /locus_tag="U0308_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEM2315582.1"
                     /translation="MKKPTVREIIDQNHFDTIYEPIVVVENTQIFGYESLTRLKTDHW
                     NAISDFIEEAEQDGLQKAFELLTLHNAVKRFNKSGDTPLFVNISYDTFLENQEELHDT
                     LLDNGKIVFEFLETSKLPQERMNDLEKQLLQFQKKHETKFAIDDFGSGYADLHRVFAH
                     HSDFVKTDRLLLRDLFESDGKKIFFEQLHNYVKKHHKSLIVEGVETKEQLEFLQEIGI
                     PYAQGYYFH"
     gene            10331..11974
                     /locus_tag="U0308_000569"
     CDS             10331..11974
                     /locus_tag="U0308_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HEM2315583.1"
                     /translation="MTVKPGFDYMNNPLLNKGTAFSKEERASYQLDGLLPPIIETIEQ
                     QAVRIETQIENLETPLHKHQLLTNLYNENRTLYYYVVTKNVTDYLPIIYTPTIGDAVI
                     QYHKEYTAPDEALFIDAFAPEKLSASIKNYAKNNPNIDMIVITDGEGVLGIGDWGVNG
                     VKIAVGKLAVYTVAAGLAPDRVLPVVIDAGTNNETLLNDPLYLGNKRPRLSESEYDAF
                     IASFVNVMKEVFPKAILHWEDFGRANASRILHNYRDKICTFNDDIQGTGAMVVAAVLA
                     TIQVSKIPLSEQKIIIFGAGTAGIGIADQLSAQWMRETGLPFESAKKHFYLVDRNGLV
                     LDNMTDLTTGQKKYAHPSTEWSNVPTDTLENLMEAVHPTMLIGCSGVTGAFKESIVKK
                     MTQYTERPAILPLSNPTKLAEATASDLIQWTDGKALIVTGSPSKPVEYQHTTYEIGQA
                     NNALLYPGLGLGALVTRAKYITDGMLAAASMAVAEQISPNKAGAALLPHVRTLRETSR
                     AVAIAVANQAIKENIHQVELTNVTEAIEREMWQPIYKGV"
     gene            11977..12984
                     /locus_tag="U0308_000570"
     CDS             11977..12984
                     /locus_tag="U0308_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HEM2315584.1"
                     /translation="MFYKTKQSLDQLVQNGSTPGISYQIKTNYLEENNIMGLKSVFPE
                     AEILPRTTENIYDIASLTKVIATTTRILQLIEQQRFQLNDPIQMYLPDFRYNNVTILH
                     LLTHSSGLAQNIPNFSMNNREDVIRYVYATPQINIPGTVVTYADANFLLLGYLISKMD
                     GNYEKAIQNNILEPLSMTNTSFHPANKKQVIPTELDQTRGLIQGDVHDFKAWTAKSGT
                     GHAGLFSTLSDLSKFRDALMLQHGAPILSEKTWQLMQINHTPGLNRSRGLGWDLRGDS
                     VLYHTGFTGTFMVLDLKHQASLIVLSNRVHPSRANPNFVDKRDSIVDTFLEEVANTTE
                     V"
     gene            13217..15496
                     /gene="pflB"
                     /locus_tag="U0308_000571"
     CDS             13217..15496
                     /gene="pflB"
                     /locus_tag="U0308_000571"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HEM2315585.1"
                     /translation="MTKAWDGFKGTAWQENISVGQFVQDNYTPYDGDESFLEKSTPRT
                     TKLNEKINKLVEEMDAKGGVLDMDNAIVSNVASHKAGYVDQENEVIVGLQTDKPFKLA
                     FMPNGGLRTAEQCLTDNGYSIDQELHDFYVKNRSTANDGIFRAYTDDIKRARHSHIVS
                     GLPDAYSRGRIIGLYQKPALYGVDRLIAEKQQDLKKIAISSDENIRLREEIWLQIKAL
                     KDLIVLGNEYGLELGRPAENATEAVQWTYMGYLASIKQANGAASSFGRIPIFLDIYIQ
                     RDLEKGIITEFDAQELIEQLTLKLRMVRFARTDGYNELYASNPTFVTTSMAGMGADGR
                     HRVTKTDYRFLHCLDNLGNSAEPNLTVLWDARLPESFKEYCMKMSVKHSSIQYENDKL
                     MQEEGYGDMQCISCCVSPLNPEADKDKGETHNLQYFGARVNVLKCLLGAINGGKDDLH
                     KNQVFDVVEPITTEYLEYEEVLEKFDKSMDWLTDTYVDAMNIIHFMTDKYNYESMQMA
                     FLPSKVTANMGFGICGFANVVDSLSAIKHAKVKTIRDEDGFVYDYEVEGDFPRYGEND
                     DRADDIAVMVLKMFKDKLDSHKLYKDSEATVSVLTITSNVAYSKQCGNSPVHKGPVFD
                     ENGKIVKEPEFFSPGANPSNKAKGGFLDNLASLSKLPFHYANDGISLTIQGAPKMFGK
                     TTEEQHHNLVGILDGYFTKGGQHINLNVLNHDEVIEKIKAGIPVILRISGYCLNTKDL
                     NEEQKMELCQRMFHEKLIG"
     gene            complement(15544..16809)
                     /locus_tag="U0308_000572"
     CDS             complement(15544..16809)
                     /locus_tag="U0308_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM2315586.1"
                     /translation="MDYDVIVIGGGPSGLMAAISAAEKNKRVLLIEKGPKLGRKLIMS
                     GGGRCNVTNRRPAEEIIKHIPGNGRFLYSAFHAFDNEDIIRFFERLGVALKEEDHGRM
                     FPVSNSARSVAEAMIQRMEKLGVKIYMQTAVKQVDYEDGHVKGVTLKDGQEISASAVI
                     VAVGGKSVPRTGSTGDGYAWAKKAGHTITELYPTEVPITSSEPFIKQKVLQGTSLRDV
                     SLSVLNAKGKPIITHQMDMIFTHFGVSGPAALRCSMFVLRELKKTGASTVKMRLDLFP
                     NVSAAELSKDVYKLLEENPKKALKNSLSSLLQEKMLLFLLEKADLDETADYKQVSPKK
                     IEQFIQLLKDFTFEVNGTLDFEKAFVTGGGVSVKEIKPKEMQSKLMEGLFFCGEILDI
                     NGYTGGYNITCALVTGHTAGAYAAEVSNA"
     gene            complement(16919..17602)
                     /locus_tag="U0308_000573"
     CDS             complement(16919..17602)
                     /locus_tag="U0308_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metallopeptidase"
                     /protein_id="HEM2315587.1"
                     /translation="MSFSQYIIYFIIVAAIPLWAQYRVKTTYAHYSKVGVANGLTGAE
                     VARHILDTNGLTNVPVHETKGILSDHYDPRKKAVFLSEANFRGRSIAGAAVAAHEVGH
                     AIQDQQDYAFMRFRSALVPVTMFSSNISWVFLIIGMLANVASFMLLGIILMAVGVLFQ
                     LITLPVEFDASKRALVQLESGGLVASSELPQAKKVLSAAAMTYVAAMAVAVLELLRLL
                     LIFTNMNRN"
     gene            complement(17689..18285)
                     /locus_tag="U0308_000574"
     CDS             complement(17689..18285)
                     /locus_tag="U0308_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1405 domain-containing protein"
                     /protein_id="HEM2315588.1"
                     /translation="MLYSLLANRAFLRLLFFGNLLGAIYGYIWYLPQLQMTEPRFWLF
                     VPDSPTAILFFTLALVAFLGKKHWPLMEALGFVCLVKYGLWAVGMNIFYMIDQGMLVW
                     GSVALILTHGFMAVEGILYAPFYRFRIGHFMIAAVWVFHNDVIDYVFGQMPIYMGLEK
                     YLPEIGYATFWLTVFVLWFVYDKTIKNKHLTLEFPHDE"
     gene            complement(18373..18918)
                     /locus_tag="U0308_000575"
     CDS             complement(18373..18918)
                     /locus_tag="U0308_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpiB family protein"
                     /protein_id="HEM2315589.1"
                     /translation="MKASISIDEKKDFIRWFLNKHQMKTREAMWVLNYIAGHDQIVKY
                     VHFVDNLEGCARGLSLSAHGVESEPFLFFKGNIMTTDPEKAFHDIRLNWDEELYVELH
                     FEEAMSSPEYALVREDNPFTAVKLADEEKEMADALIYQSVHQFSREKVLQQIDEALDT
                     RDEAAFHKLVRILQQMDTEKE"
     gene            complement(18954..20207)
                     /locus_tag="U0308_000576"
     CDS             complement(18954..20207)
                     /locus_tag="U0308_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEM2315590.1"
                     /translation="MELANKMLHALEHEDMALAKKYFDEVVQAGTDEEQYYLAEELFT
                     LGFLDETEDLYELLLAKYKDEGELLVRAAEVALEKDDIDSAQDYLEKVNKEDEAYIES
                     LLVLADLYQMQGLFEVSEQKLLEAKQMAPNEPIIDFALGEYYLSQARFASAVQSYQTA
                     VEAGLTIISNGAVSVYERIAEAFAASGAFEEALSYYERALEDKESVDTLFGMGLTAYQ
                     AKDYTKAIHALEHLREHDPSYTTLYSYLAKSYEENGEPEKAIAVLRDGLTQDEFNKEM
                     FLEAGKLAVTLRLPEEAEEFYRQAIVLDEEYSEAIMQLNKLLLAKEDYEGVIELVEGL
                     GEEVISEPQIFWDVSVAYQETEQYNKAKANYELAYSHFTNNPTFLKEYGLFLREEGEY
                     AKSQEVLRNYLELEPEDTEILSLFD"
     gene            complement(20339..21625)
                     /gene="aroA"
                     /locus_tag="U0308_000577"
     CDS             complement(20339..21625)
                     /gene="aroA"
                     /locus_tag="U0308_000577"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEM2315591.1"
                     /translation="MKLITNKQGLVGAITVPGDKSMSHRSIMFGAIAEGKTVIRHFLR
                     ADDCLGTIKAFKALGVKIEETEEEIIVHGTGFDGLKQADGPLDIGNSGTTIRLMMGIL
                     AGRDFDTVILGDESIAKRPMNRVMLPLQQMGAKMHGKDGSEFAPITINGKQSLKRMEY
                     HMPVASAQVKSAIIFAALQAEGETIIHEKEKTRDHTEHMIRQFGGEIEMDGLTIRVKG
                     GQTFTGQEMTVPGDVSSAAFFIVAGLITPGSEIELTHVGLNPTRTGIFDVVEQMGGSL
                     VVKDSSRSTGKLAGTVVVKTSDLKGTEIGGDIIPRLIDEIPVIALLATQAEGTTIIKD
                     AAELKVKETNRIDAVATELNKMGADITPTEDGLIIRGKTPLHAANVTSYGDHRIGMML
                     QIAALLVEEGDVELERPEAVSVSYPTFFEDIRSLLK"
     gene            complement(21639..22742)
                     /locus_tag="U0308_000578"
     CDS             complement(21639..22742)
                     /locus_tag="U0308_000578"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEM2315592.1"
                     /translation="MKGTVVIVGLGLIGGSIALAIKAKHPEAHIIGIDVSYHSLEVGK
                     SLGVIDEIGESILIDGPKADLLVFCCPVKETEQLLTRLPGLRLKENVIVTDTGSTKGT
                     IMEASTALRESGITFIGGHPMAGSHKSGVRAAKELLFENAYYLLTPTKDVAEDKVAEL
                     RTWLSGTNAKFLVLSPNEHDEITGMLSHLPHIVAAALVNQTQSFTEEHPAAFRLAAGG
                     FRDITRVASSDPRMWTDISISNQKTLTKQLTIWRDSMNEALEMLESEDASSIYAFFDG
                     AKEFRDSLPVHQGGAIPSFYDLFVDVPDYPGVISEVTRYLGEEEISLTNIKILETRED
                     IFGVLQITFQSDEDRDRAKRCIETRSNYTCHYE"
     gene            complement(22763..23845)
                     /gene="hisC"
                     /locus_tag="U0308_000579"
     CDS             complement(22763..23845)
                     /gene="hisC"
                     /locus_tag="U0308_000579"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEM2315593.1"
                     /translation="MKWKKSLTGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTS
                     PKVAELQANSSVETEIYPDGWASSLRTVVADFYQLEEEELIFTAGVDELIELLTRVLL
                     DTTKNTVMATPTFVQYRQNALIEGAEVREIPLLVDGAHDLDGMLNAIDDNTTIVWVCN
                     PNNPTGNYIDLADIQAFLDKVPSDVLVVLDEAYIEYVTPQPEKHEKLIRTYKNLIITR
                     TFSKIYGLASARVGYGIADKAIIEQLNIVRPPFNTTSIGQKLAIEAIKDQAFIEACRT
                     SNANGIKQYEAFAKRFEQVKLYPANGNFVLIDLGIEAGTIFSYLEKNGYITRSGAALG
                     FPTAVRITIGKEEENSAVIALLEKLL"
     gene            complement(23845..24219)
                     /gene="aroH"
                     /locus_tag="U0308_000580"
     CDS             complement(23845..24219)
                     /gene="aroH"
                     /locus_tag="U0308_000580"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEM2315594.1"
                     /translation="MRAIRGATTIETNSPEAIYAATKELFEEILTQNEITDSEQLTSV
                     IITVTEDIFAAFPAKAVRETPGFEYVPVMGMQEIPVPNSLPMCIRFMVFTDLHKPLEA
                     INHVYLRGAKVLRPDLVKEEDA"
     gene            complement(24216..25313)
                     /locus_tag="U0308_000581"
     CDS             complement(24216..25313)
                     /locus_tag="U0308_000581"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEM2315595.1"
                     /translation="MPEITVRAKSKTYPVYINEFALEDVREKWTESLAKFSHVFVLTD
                     EHVAELHKAKLDAVLADLPVVTYYVAPNGEEAKTFRVYEDVMTKLIETGLDRKAVLIA
                     FGGGVIGDLGGFVAATYMRGIPFYQVPTTVLAHDSAVGGKVAINHPLGKNMIGNFYQP
                     EAVIYDTQFFATLPEREMRSGFAEMIKHALISDQTLLRALMDTFTEPKDFYTKDLTPF
                     LQRGIEIKANIVAQDETEQGVRAYLNFGHTFGHALEAYGNFGKWLHGEAITYGMIYAL
                     TMSETIYGLDFDLAEFKTWLKQLGYDTTFDATVPFNKILENMRHDKKTTFNEISMVLL
                     EEIGEPVIFKAEDDLIFETYKRVMRNGGNGI"
     gene            complement(25316..26482)
                     /gene="aroC"
                     /locus_tag="U0308_000582"
     CDS             complement(25316..26482)
                     /gene="aroC"
                     /locus_tag="U0308_000582"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEM2315596.1"
                     /translation="MRYLTAGESHGPGLTTIIEGLPAGMPLLAEDVNKELKRRQGGHG
                     RGARMRIEKDQVQITAGIRHGKTLGAPVAMFVENKDWKHWETVMSIEPVPEKNEKSRR
                     VSRPRPGHADLVGGMKYGHNDMRNVLERSSARETTVRVAAGAVAKKLLHELGIEVAGH
                     VLEIGGTRANLTRDYAVSEIQETSEASPVRCLDGVAAEEMMQKIDDAKKNGDTIGGIV
                     EVVVGGVPAGLGSYVQWDKKLDAKIARAIVSINAFKGAEFGVGFEAARKPGSEVMDEI
                     LWSKEDGYTRRTNNLGGFEGGMTNGMPIVVRGVMKPIPTLYKPLQSVDIDSKETFNAS
                     VERSDSCAVPAASVVAEAVVAWEVAVAVLEKFDGDRFDTLKKHVEEHRNLTKEF"
     gene            complement(26686..27129)
                     /gene="ndk"
                     /locus_tag="U0308_000583"
     CDS             complement(26686..27129)
                     /gene="ndk"
                     /locus_tag="U0308_000583"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEM2315597.1"
                     /translation="MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDREL
                     AEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIR
                     ADYAVHTNRNVIHGSDSPESAKREIQLFFAPQEILSYQKAIDTWI"
     gene            complement(27148..28113)
                     /gene="hepT"
                     /locus_tag="U0308_000584"
     CDS             complement(27148..28113)
                     /gene="hepT"
                     /locus_tag="U0308_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenyl diphosphate synthase component II"
                     /protein_id="HEM2315598.1"
                     /translation="MKLNFLYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEAG
                     GKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDVVDNADLRRGRETIK
                     SKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQ
                     SVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDF
                     VGTEKELGKPAGEDLRQGNVTLPVFFAMEDPFLKKRISQVTEETPAEEIAVLVEEVKK
                     AGAKQAEDVATAYLKKAVEILDSLPQVPELKPLKQIVRVLDKRNY"
     gene            complement(28124..28837)
                     /gene="menG"
                     /locus_tag="U0308_000585"
     CDS             complement(28124..28837)
                     /gene="menG"
                     /locus_tag="U0308_000585"
                     /EC_number="2.1.1.163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="demethylmenaquinone methyltransferase"
                     /protein_id="HEM2315599.1"
                     /translation="MTETKEEKVHKVFEKISPSYDRMNSVISFKLHVKWRKETMKLMR
                     VQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEADLHNVEL
                     IHGNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGGQLACIDTSQPNIP
                     GWKQVFNAYFRYVMPVFGKFFAKSYKEYSWLQESTREFPGMARLAEMFQEAGFSYVRY
                     ISHSGGASATHFGFKKKEQ"
     gene            complement(28860..29627)
                     /locus_tag="U0308_000586"
     CDS             complement(28860..29627)
                     /locus_tag="U0308_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenyl diphosphate synthase component 1"
                     /protein_id="HEM2315600.1"
                     /translation="MTYQAREAGLKEVEQLVHEQAVYQYLQENNEGGQMDKDQMLFLH
                     EAISGSDLTDASAYRVVSATLYMILAHDTHEKIDEPGDVVQLTRKEQELTVLAGDFYS
                     ALYYRTLAELEMIPLLRALQSGVQETNTAKTNIYQLHVATDEEYLSQLTLTNAAIFAK
                     FAKYFMKDDTFIALGCQFFLLKRLQTELATYKEIGASRLKRAFDHGYFAKEAVSNFES
                     WLVAIIHDVKSEVKRLKDKSEPLSNILGKRIIEVIND"
     gene            complement(29684..30253)
                     /gene="folE"
                     /locus_tag="U0308_000587"
     CDS             complement(29684..30253)
                     /gene="folE"
                     /locus_tag="U0308_000587"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEM2315601.1"
                     /translation="MEQIDKQKIADAVKVILEAVGENPEREGLIDTPMRVARMYEEVF
                     AGLKKDPSVHFDTIFEEQHEELVLVKDIRFSSMCEHHLVPFFGVAHVAYLPQNGRVAG
                     LSKLARVVDDVSRRPQLQERITTTVAEIMMEKLKPLGVMVIMEAEHMCMTIRGVNKPG
                     TKTITSAVRGAFKNDDKLRSEVLALIKHN"
     gene            complement(30489..30764)
                     /locus_tag="U0308_000588"
     CDS             complement(30489..30764)
                     /locus_tag="U0308_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEM2315602.1"
                     /translation="MANKTDLVNSVAELADLSKKDAAKAVEAVFETIQTSLSKGEKVQ
                     LIGFGNFEVRERAARKGRNPRTKEEIDIPASKVPAFKPGKALKEAVK"
     gene            complement(31175..32155)
                     /locus_tag="U0308_000589"
     CDS             complement(31175..32155)
                     /locus_tag="U0308_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HEM2315603.1"
                     /translation="MEVTRTDKAVTLTWNKEEVSEGTVVFVSSSPKLEDNSDPVFKVT
                     NDVDHYSYDTKDIPIYFFLETPNGDRTTVSERILPLESVFNFRDMGGYASKNGKHVKW
                     GKLYRSSNLVNINENDAALLQKLHIKWICDLRSSSEVQAQPTPAIEGVLNKHIPIGTA
                     KNEETKLPVTNDTTIYEPLMGESYRVFVQSVEGFREIFTEVLEDAKAGLPFVFHCTAG
                     KDRTGVLGALLLTLLDVPEKTIFDDYAITNRYQDDILQEMGGIVALFSNGTEKIDLET
                     FRPMAEARPEYLEIAFDEMKKQYGSVANYLEKGIGITAAEKAAFQKEMLE"
     gene            complement(32258..33274)
                     /locus_tag="U0308_000590"
     CDS             complement(32258..33274)
                     /locus_tag="U0308_000590"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEM2315604.1"
                     /translation="MTQKKVAILGAGSWGTGLALVLADNNHQPVIWGNLDKIVNEINE
                     SHTNSHYLPDIILPTEVKATLSLDEAIDGAEIVVIAIPTNAMRIVCKQLNEALKEPTI
                     LVHVSKGIEPETNLRMSEVIEDEIDASKRKALVVLSGPSHAEEVALRHPTTLCASCKD
                     LSAAEIVQDRFINNNLRIYTNDDVIGAEIGGALKNIIALGAGISDGLGYGDNAKAALM
                     TRGMAEITRLGVAVGSNPQTFYGLTGIGDLIVTCTSVHSRNWRAGNMLGKGENLDEVL
                     EKMGMVVEGVRTAKAVHGWAKKLDIDMPITESIYAILFENKDAREAVDLLMGREKKIE
                     KESF"
     gene            complement(33297..34607)
                     /gene="der"
                     /locus_tag="U0308_000591"
     CDS             complement(33297..34607)
                     /gene="der"
                     /locus_tag="U0308_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEM2315605.1"
                     /translation="MAKPVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYN
                     SAEWLGKEFNIIDTGGIDLSDEPFLEQIRAQAEIAIDEADVIIFITNGREGVTDADEQ
                     VAKILYRSNKPIVLAINKVDNPEMRDQIYDFYSLGFGEPYPISGSHGLGLGDMLDAVR
                     AHFPKEEEEEYPDDTVKFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTY
                     TFDGQDYVMIDTAGMRKRGKVYESTEKYSVLRAMRAIERSDVVLVVINAEEGIREQDK
                     RIAGYAHDAGRAIIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPIVFVSAKTKQ
                     RLNNLFPLINQVSDNHSLRVQSSMLNDVISDAVAMNPSPMDKGKRLKIFYTTQVAVKP
                     PTFVVFVNDPELMHFSYERFLENRIREAFPFEGTPIRVIARKRK"
     gene            complement(34751..35896)
                     /gene="rpsA"
                     /locus_tag="U0308_000592"
     CDS             complement(34751..35896)
                     /gene="rpsA"
                     /locus_tag="U0308_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEM2315606.1"
                     /translation="MSEDLFDVEVRNFEEGDKVTGTVTSVEDKQVYVGIPGSKLDGVV
                     PISELSNIHVETASDVVSVGDTLDLIVTKVEDDILVLSKRKVDAEKASDDIKAKFESG
                     EVFEAVVSDVVKGGLVVDLGVRAFVPASLVEDHFVEDFADYKGTTLTFKVVEFEPENN
                     RVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANFGAFVDIGGVDGLVHISQ
                     ISYKHIATPQEALEEGQKVTVKVIGIDPENERISLSIKATLPGPWDGIAEKAPVGSVL
                     EGKVVRLVTFGAFVEIFPGVEGLVHISQISHEHIGTPQEVLSEGQTVEVKVLEVNEAD
                     KRLSLSIKELKDAPVEEADYELPEENTGFQMSDLIGDKLKGLQNDDK"
     gene            complement(36255..36929)
                     /locus_tag="U0308_000593"
     CDS             complement(36255..36929)
                     /locus_tag="U0308_000593"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEM2315607.1"
                     /translation="MTKKICIAIDGPAAAGKSTVAKIVAKKLRFVYIDTGAMYRAVTY
                     IALKNNIAYEDEKAIATLLQKTVIRFEPGEVQQVFVGEENVTEVIRSLEVTNHVSIVA
                     AHPSIREALQERQQVFATEGGIVMDGRDIGTAVLPNAELKIFLLASVEERAERRYKEN
                     MAKGFAGDLGQLKKEIEERDHLDYTRTHSPLKKADDAIEVDTTSMSIDEVANKILSLA
                     ELKINN"
     gene            complement(36945..37907)
                     /locus_tag="U0308_000594"
     CDS             complement(36945..37907)
                     /locus_tag="U0308_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEM2315608.1"
                     /translation="MAKVALITTGGTIASKKTASGKLASGELSGEELAALCQLPTEIQ
                     IDIYSTFQLPSMHITLPDLISLKQLIESIFMDETYDGIVVTHGTDSLEETAYFLDLAV
                     TDARPIVVTGSQRAPEEPGTDAYVNIRHAIYTACEINLRQAGTVVVFNERIFAARYVK
                     KVHASNIQGFSAFGFGYLGIIDNDQVFLYQKPLEHECFDIRLDLPEVVVIKCYIGADG
                     LFIDAAIDSGVSGIVLEGVGRGQVAPKMMPAIIRALDAGIPVVITTSAEEGNVYTTYD
                     YEGSTFDLYNRGVILGKDYDSKKARMKLMVLLASQEEINQTNFR"
     gene            complement(37988..38707)
                     /locus_tag="U0308_000595"
     CDS             complement(37988..38707)
                     /locus_tag="U0308_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM2315609.1"
                     /translation="MVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKK
                     KTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEE
                     KEKAKKAAEEKAAAEKAAEEKKAAEEKAAADKKKQEEDAVKAANAKKEQEAAEEKAAA
                     DKAAAEKAAAEKAEQQKANEASQQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKI
                     KQANGLGSDNVPVGTVLTIPQ"
BASE COUNT        11236 a         8561 c         6535 g        12456 t
ORIGIN      
        1 aaacccgaaa aagtgatttt cacactatgt tttcgagtta aaagatatgt ttttgggtat
       61 tttattaggg ttaaaacgtt cttttctata gtgtttcgtt atttttcatt atctagcaaa
      121 atatctgcgg aatagattga atgtacttca ccgagtgcgt cttggagtaa gagtacacct
      181 tcatcagaaa tcccttttac ttgtccatga attttgcctt ttgttgtgct agcagttaat
      241 ttttcgccaa atgggattgc tttggtttcc caaagtaatt ttatcggtgc gaatccttta
      301 tctagaaaaa gctcataata tttttctaaa gaagtgagaa tttcttgtag taaagctttt
      361 cttgagacgc tttcgcctaa ttccagtttc agagaactcg ctttgtcttt gatttcttct
      421 gggaattcct gttgatttac attgattccc atgccgataa ttactgcatg aatcgtttct
      481 gcctccgctt gcatttccgt taaaacgcca cagatttttc gtttaccaat gtaaatatca
      541 ttcggccatt tgattttcgg ttcgagcttt gtgctatttt caatcgcttc tgtgattgcg
      601 agtgaggcga taaacgtgaa ctggggtact ttttgaatag ggatttgtgg ttttaaaatt
      661 acactcatcc aaataccttc cccttttttg gaactccaag ggcgaagcaa gcgacctttt
      721 ccagctgttt gctcatcggc tacgataacg gttccttcag ggctagattc gatttgctga
      781 tgggcgatga tttgtgtaga gctaaccgat tcatggattt ccaaatgctg accgataaat
      841 ttggtttcta aaccgagtag tagtgcatct ttcgtgtact gttctgctgt tgctgacaaa
      901 cggtaaccac ggtttctgac tgcttcgatt tcaaatcctt ctttacggag agcttccatt
      961 tgcttccaaa cggctgtgcg cgagcatcct agactatccg caatttcttg ccctgataaa
     1021 taagtaccat cactttctgt aaataaagca agtaattttt ctcgattatt cttcatgata
     1081 gcctagccac cttttaatct gaattttttc attgtttatt tcattggaaa ggacaccaca
     1141 ttccacttta tcaagcgtct cttttaccca tggacctgcg ctttctccag accattttaa
     1201 taaatcagct ccagtaatag ctaagtcttt tttggagtga attggtaacg cctcgtatgc
     1261 ttgacttact ttatgttggt tgttttcttg ccctcgaata acatttagtt catttactaa
     1321 tgagaaaact gccttgccag catgataaag ttcttctgtt agccatgtct ctttcatgtt
     1381 tagcgcgtat tgatatgctt tattcacaag ttgaattgtt ttattgggta atttccaagc
     1441 tttaagaaat gcgttaacat tgttaggttt gacagcaacg acgagtccaa gccaaatcga
     1501 ttcttcggtt gttcgttttt cccagtccca actagcaaac tcgcttagtg ctgatttctc
     1561 gtcttttaag cctggtaaat aagtttccat tttgactttt aaaagtagtt ctatcgcacg
     1621 ttttgctgct ttgcctttca tcatttttag ccattcaacc gtaattcgtt caacggaagt
     1681 atgctgtaac aactctattt ggctttctaa agctttttcg gtttctttat caagctcaaa
     1741 gtcaagttga ctcagaaagc ggactgctcg catcattcta agcgcatctt catgaaaacg
     1801 ttcggaggct ttaccaactg ctttgatttc tttattttga atcgctagtt gcccagaaaa
     1861 cgggtcttgt agcgcaaaat gttcatccat cgcaatggcg ttcatcgtaa aatcgcgacg
     1921 ttttaaatcc tcttctaggg agcgaataaa ggttacctcg cttgggcgcc tgaaatcttc
     1981 atacgtccct tccgttcgaa aagtggtcac ttcataaaat tcattatttt ctctaactgt
     2041 aacagtccca tgtgcaatcc cagtgtcata acttgtctga aaaatctctt ttacttcttc
     2101 tgggaaagca ctagttgcaa tatccacatc ggaaatcgtt ctatttagca agtaatctct
     2161 gacagatccg ccaacaaaat acgcttcaaa acccgctgta gttaattttt gcaatacagg
     2221 aagcgctttt aggaaaacgt cattcatctg tcatcgctcc tttattcatc attccgtctt
     2281 aagtctcgcc aatctaggaa accagctcct aaaccacgaa ttaaaatttc tgctgtgcca
     2341 atatttgtcg ctaaaggaat ttcgtataca tcgcataatc gaataagcgc cgtcacatct
     2401 ggttcgtgag gctgcgcagt gagtggatcc cgcaagaaaa taactaagtc cattttattt
     2461 tctgaaatcc gcgcaccaat ttgttgatcg ccaccaagcg ggcctgattt aaaacgatgt
     2521 accgttaagc cagttgcttc gataatgcgt aaacctgtcg tcccggttgc atataattga
     2581 tgcggttcga gcaaatgttt atatgcagtt gcaaatccaa ccatcaaatc tttcttttca
     2641 tcgtgcgcga ttaatgcgat atgcatctca ttcacctatc cttagtctaa aatattttct
     2701 aagccataaa taagtgtttc aagttctttt gttttacgta cagaaagtgc cacgccagac
     2761 ataaaggaaa ttcgatcata agagtcatgg cgaattgtta atccttgtcc ctctgctcca
     2821 aaaatcactt cttgatgtgc tacaagtcct ggtaaacgca cactatgaat tcgcatacct
     2881 tcatattctg cgcctctagc tccttcaata agttctactt catctgctgc accttgttta
     2941 acgaattcac gcgtttctgc catcatttcc gcagttttaa cagccgtacc acttggcgcg
     3001 tctaatttat tgtcatggtg caactcaata atttcgacgt tcgggaaata cttagctgct
     3061 ttttgtgcaa attgcatcat taaaacagcg cctacagcaa agtttggcgc aattaaagca
     3121 ccgatttttt tcgattctgc aattgatctt agttcactaa tttgttctgg tgtaaaacct
     3181 gttgtaccaa cgaccgcacg tacgccgtgt tctaaaatcg ttttcgtgtt actataccct
     3241 actttagggg tcgtaaaatc aacgacacaa tccggtttta tttcttctaa catctcgctt
     3301 aaattaccaa aaacaggtac atctaacgag ctaaattcca ctatttcatt tatatttttt
     3361 tcttttggtt catggtcaag tacggctact aactctaaat ctgcttctct taaaacagtt
     3421 ttgacaacct cgtgtcccat tcttccttta aatccagata ctgctactct cattttgctt
     3481 tttcctcctt ttttgtccaa cgatctttat cgcgttcttt aaattttgcc atgaccgtat
     3541 cgtgtgcttt ttccatatca atatcaagtg agttggccat gcaagtaaga acaaaaaggc
     3601 aatcacccag ttcctctgct acagttttag taggttcact tgttttcttc ggtttttcgc
     3661 cataataatg gttaatttct ctggctagtt ctccggtttc ttctgtaatt cgggccatca
     3721 ttgctagtgg ggaaaagtaa ccttcctcga atccaccaat gaaatcatcc acttcttttt
     3781 gtatttctgc cattgttttc gccatcggtt ttcccccttt atgtggtaaa ctaaaataga
     3841 ttttaagact aattgttaac ttcatttcat tatacctaaa caaatacgtc caagtccatg
     3901 attttttact tacatattaa ataggtttca gggaggaaaa aagttatgct aaaaacatta
     3961 cgcacgaaaa atatttgctt tattatgctt ggtacggcga tttacgcatt tggcttagtt
     4021 aattttaata tcgccaataa ccttggtgaa ggcggtttag ctggagtaac cttattcctt
     4081 cttcacttct tccaaattga tccagcgtac tctaacttaa ttttaaatat acctttgttt
     4141 atattaggtt ggcgagttct aggcaatcgt tccctcattt atacgggtat cggaacggtg
     4201 agtttgtcct tatttttatg gattttccag cgaatacctt atacgctaga tttacatagc
     4261 gatttacttt tagtcgccct ttttgctggt ggctttagtg gtattgggct tggcctcgtg
     4321 tttcgctacg gtgggacgac tggtggtagt gatattatcg ccaaactgct aaatcatacg
     4381 aaaggcatta gcatggggcg cacgctattt gctattgatg caattgttct cgttgcctca
     4441 ctctcctatt tagatgtccg tcaagttatg tacacgctcg tcgccgtatt catcggctct
     4501 cgcgtaattg attttgttca agaaggagct tatgcggctc gcggtgcgct cattatttct
     4561 aaagataatg acgcgattgc ttcccatgtg atgctcgcga tgaatcgcgg ggtgacagtg
     4621 ttggaaggtc gcggtggctt ctctaaaaaa gaccaagacg tcctttatat cgtcgttgcg
     4681 aaaaatgaaa taattcaatt aaaaaatatt gttcaagcaa ttgacccaca tgcctttgtt
     4741 tccgtcagtg tcgttcatga tgtgatggga gaaggtttca cactcgatga aaacaagaat
     4801 cctatctact aatgtattta cttggctcat agttttctaa agccaaatcg acggtgtttc
     4861 caagtgctaa atccgctaaa agtttgccaa cataaggccc ggtagttaaa ccagaagcac
     4921 caagaccatt cgctaaaaag actgactcaa atccaggaag ttgaccaata agtggcgcaa
     4981 aatcaggcgt gtatggtcta gttccgaccg ccacatgggc cactttactc gctaaatccc
     5041 cttccataaa ctggctgact tctgttagta tttctgcctt accttctact gttggtttcg
     5101 tatcgaagcc agcagttttt tcatgcgttg caccgacgat aattttccca ttatcaaaag
     5161 gaacaattga tttcgcgctc ggtggtaaaa ttactggcca ttcatccgtt tgaaattcgc
     5221 taaaatcaag ttccagcaat tgcccttttt gcgctaaaac ttctgtatga aaactcgcct
     5281 cgtctagcaa ttcttttaac caagcgcctg ctgcaatgat taatttgtcg taatgttcat
     5341 cttccccgtc aacacgaact tttccgtcag tagaaaaatg cgctcgcccc gacttgattt
     5401 ttaccccatt ttcttttgcg gcataaagta gcctttcaca aaataaacta ccgttcactc
     5461 gtgctgctcc gcttacatag accgagccaa atcccggttt aactaacgga aatttttgct
     5521 ttgtttcctc ttctgacaac tttacaattt cacccataac ttccgcatcg aggcgtcgtt
     5581 cattcgcaag attaaacagt tctgttactt tttcttctgt ctttcgaagt gcgagcacac
     5641 caacttgttt atagcccgaa ttccgcccag tatctccttc gagcgtcccc gccaattcct
     5701 tataaaaggc ggcactattt tttgcaagct cataccaata tttgtttcgc cttttagaaa
     5761 gccacgggca aattattccg gctgcagcac gcgttgcttg tcccggttca tctgaatcaa
     5821 ttagcgttac ttgcacgttt tcttttgaca ataaataggc ggcactagct ccaacaattc
     5881 ccccgccgat aatcactatt ttttgcatcg ttacacccct ctatatcaat tgtgacacaa
     5941 gttgactttt ttataactct ttgtaataat atgtgaaaat agttaagttt acaaactact
     6001 aaaaatcctc tacatcattc tatccattgt actgaaatcc agctttaatt acaaaaaggc
     6061 agattttagc ttatctcgtc gtcattacca catatcctct tagagaacgc tttcgcccat
     6121 tggttggttc tttgtactgc gtctcagcta aaaattcatt tatttttcct tctgcctata
     6181 ttaacagttc agctgattag ttatgctgag atatgggaga tttttttatg ccaaatattc
     6241 ttgattcatt atggaacagc atggcgcttt ttttatcagc gctttttttt cacggaatgg
     6301 cactgcgatc tattagagaa aaaaagcctg cttggttcca aattaaattt tctaatgaaa
     6361 ttattaatta tgcactgggc atttactacg gccttctagg tgtttatttt attatccgcg
     6421 gattacccgg cacagattct gggatttata cagatatgct acttaatatt ttaattgtcc
     6481 tgcatttatt ttcttcggca ggtcctgcta ctatcgcact attactaatt gtcgcaggaa
     6541 aactttttct cggtgatgcg ctgtttgcca atttgattta cgcgttttta attatcggtt
     6601 ttcactttgt atgcatggaa gtcgctaaac ttcgacttag ttccgttcaa aaagtcgttt
     6661 tagtcaaact tagtgcgatt ccccttatgc tattttattt acatcaaaaa atacatttat
     6721 tgtataccat aaatgactta cctgtttgga tactctattt tttggtttct ttttttatta
     6781 cgtttattat tgtttcagcg gcttattata tcgatacatc gaataagcta atttatgatt
     6841 tgcagcaatc caccatcctt gacccgctaa caggtttgac gaatttccgt cattttgaaa
     6901 aggcgttcga agcagcattt aaccatgcta cgttaaaaaa atcgaatcta agtgtgatta
     6961 ttattgatat tgattatttt aaacgggtaa atgatacata tggccattta gtcggaaatg
     7021 gggttttatc tacttttagt caaatgctat taaaaatcag cttcccgcca aacacattga
     7081 tatcaaggat tggcggcgag gaattcgcca ttattttgcc aaatattaat gtcagtgaaa
     7141 cggagcattt ggcggagaaa atccgacgta aagtcgaaaa aattgatgtt ccgattgttg
     7201 cttctggctc cgttattact atttctgctg gtatcgcaaa ttatgacggc agaaattatc
     7261 caaatccgaa cgagctacta aatgcagccg atcaagcgct atataatgcg aaacgaaatg
     7321 gacgaaacca agtgcatatt cgcgaaacag aaccagttgt ttaagagagt aaaaaggaga
     7381 tgagtccatt tgttcgaact agttaattca tacatagata gtttagcgct ctttctcgct
     7441 atccttttta tccaagggat gtcttttcga aaaataagac aatatcgccc aaattggttt
     7501 caaaatggtg gtagacggct atttctttcc atcctactag gcgtctacta tggtttagca
     7561 ggtatttatt ttatttatga aggtgcttac gaaaataatc ccgttattta cacgaatatg
     7621 cggattttga ttttgatggt aacaagtgtt ttcggtggcc gcgttccact cattttcgcc
     7681 tatttagtaa tgctttttgg tcggattagt tttgatattg cttctcctgt tactagtcgc
     7741 tatgtcattt tgatgacgct catttttgcc gcgtgtttac ttgttacttt ttggaaaaaa
     7801 caacgctttt cgagatttgt tgctttaatc attttaaact tcccagcgat tctttattat
     7861 ttcgtgaata attttgacga aggacgaatc ctgcaaggtt ttgagattat cgagtatttc
     7921 ctgctattct ttgtaaccgc cttactggta ttttacgcct gcaattacat tgataaaagt
     7981 aatctcgtta tccaaaattt gacggaaact gcgatgacgg atagtttaac taatttacca
     8041 aacatgcgct ttttcaccca acagtttggt tggatttttg cgaaatcgca aaaaaggaaa
     8101 aaatctttat ctcttttcat cattgatatt gatcatttta aagaaataaa cgattttcat
     8161 ggtcatcaag ctggtaatac cgttcttgct cagtttagta gcattcttaa aaatcgcacc
     8221 ttcccgccaa gaaccatgtt tgcacgaatt ggtggcgaag aatttgctgt tttacttcaa
     8281 aacgttggta cagagcaagc tgctttaatt gctgattttt tccgtgaaga agtggaacga
     8341 gcgaagtttc cttataatcc cgcaagtggc aaagttactg tatctatagg tgttgcttct
     8401 gctagttcca acttttcaac aaccgaatca cttttcgaag ctgctgacca agcgctctat
     8461 caagcaaaac aaaacggccg caatcaaatt gctgttcatc agggggaact cgaatgaaac
     8521 gattcatctt aattttcatt ttaattatcc ttattggcgc cggatttttc tttttccttc
     8581 gtccagaacc taaaaaaaca gtgagtgcac caaaagaaac cacacccact tccacctctg
     8641 ttcaaacgta tgtgaaagaa aactatactg caaaaaacgg tttaattgtg gattacaaaa
     8701 atgcgcaaga accgcattat ttagccgaaa gcatcggact ttatatggaa tatttggtcg
     8761 aagtgaatga tagtaaaact ttccaagaac aagtaagtca tttagaaaag aattttataa
     8821 ccgaagataa ctttattaaa tgggaagcaa ccgacgcaac aacgactaat gcgattgtag
     8881 atgatttccg tattacagaa gcactttatc aagcgagcga aaaatttatt ttcccgtcct
     8941 acaaaaaaat ggcagataaa atcctagcca acaccaaaaa atatagcgct gaacaaggtg
     9001 ttccagtaga cttttacgat tttgttcata agaaaaaagc agatacgctc catttaagct
     9061 atctaaatat ccaagcgatg caacagatta attatcgaga taaagcctat ctaccaattc
     9121 aaactgttaa tgctgaccca ttttttacag aagtgtttca aaatgaacag tttcaatatg
     9181 ctgaccctag tgaagttaat atgattgatc aaatgctcat tgcgatggct tattttgatg
     9241 aaaatggtga tgtagagcca aatttcgata attttttaca aacagaatta gcttctaaag
     9301 gaaaagttta tgcacgttat caaagagaaa caaagaatcc aagttcagaa aacgaatcta
     9361 ccgccgttta tgcctttttg acacagtatt ttaacaagac aaatcaagct aaaaatggta
     9421 aaatcaccaa agagttatta gagaaaatgg acacgtcaaa tccagaaaca acccattttt
     9481 tcgattatat aaataaagaa ataactctta agaaataacg gaaagaagtt ggacaaatga
     9541 aaaagcccac tgtacgtgag attattgatc aaaatcactt tgatacaata tatgaaccga
     9601 ttgttgttgt agaaaacaca caaattttcg gatacgagtc actcacccgc ttaaaaacag
     9661 atcactggaa tgcgattagt gattttatcg aagaagcgga acaggatggt ctgcaaaaag
     9721 catttgagct gctcacgctt cataacgcag tgaaacgctt taacaaaagc ggagacacgc
     9781 cactatttgt caatatttcg tatgatacat ttttagaaaa tcaagaagag ttgcacgata
     9841 ccctacttga taacgggaaa atagtttttg aatttttgga aacatccaag ttaccacaag
     9901 aacgaatgaa cgacttagaa aaacaactgc ttcaattcca gaaaaaacac gaaactaaat
     9961 ttgctattga tgattttggc tccggttatg cggacttgca tcgcgttttt gcgcaccatt
    10021 ctgattttgt caaaaccgat cgcttattac tacgagattt atttgagagc gatggcaaaa
    10081 aaatcttctt tgagcaactt cataattatg ttaaaaagca tcataaatcc ttaattgtcg
    10141 agggagtgga aacaaaagag cagctagaat tccttcaaga aatcggcatt ccctatgcgc
    10201 aaggttatta ttttcattaa aaataaaaaa gaaaatctgc ttattgtcag gttttctttt
    10261 tgtttggaat cagttgttat tcttctttcc cccatgtaaa atagaataga ataaaaagga
    10321 gtgctgaaaa atgactgtaa aaccaggttt tgactatatg aataatccat tattaaataa
    10381 aggaaccgct ttttcaaaag aagaaagagc aagctatcaa ttggacggat tactgccacc
    10441 aattatcgaa acaattgaac aacaagccgt gcgcatcgag acgcaaatag aaaatttaga
    10501 aacaccttta cataaacatc agcttttaac aaacttatat aatgaaaatc gcaccctcta
    10561 ctattatgtc gtaacaaaaa acgtgactga ctatttgcca attatttata caccaactat
    10621 cggcgacgca gttatccagt accataaaga atacactgcg ccggatgaag ccttatttat
    10681 tgatgccttt gcacccgaaa aattaagcgc atcaataaaa aactacgcaa aaaataatcc
    10741 gaatattgat atgattgtta taacagatgg tgagggtgtg cttggaattg gcgactgggg
    10801 tgtgaatggt gtgaaaatcg ctgttggaaa attagcggtt tatacggttg cagctggact
    10861 tgcaccagac cgtgttctgc cagttgttat tgacgccgga acgaacaacg aaacacttct
    10921 taacgatcca ctatatctag gaaataaacg cccccgcctt tcagaaagtg aatatgacgc
    10981 ttttattgct tcttttgtta atgttatgaa agaagttttc ccgaaagcca tccttcactg
    11041 ggaagacttt ggacgcgcga atgcaagtcg tattctgcat aattaccgcg ataaaatttg
    11101 tacatttaac gatgatattc aaggtacagg ggccatggtg gttgctgctg ttcttgcgac
    11161 gatccaagtt tccaaaatac cattaagcga gcaaaagatt attattttcg gggctggaac
    11221 tgctggaatc ggtatcgctg atcaacttag tgctcagtgg atgcgtgaaa ctggtcttcc
    11281 ttttgaatcg gcgaaaaagc atttttattt agtcgaccga aatggtttag tgcttgataa
    11341 tatgaccgac ttaactaccg ggcaaaagaa atatgcacat ccgtcgactg agtggtctaa
    11401 cgtgcccaca gatacgttag aaaacttaat ggaagcagtt catccaacaa tgttaatcgg
    11461 ctgttctggt gtcaccggtg cctttaaaga gagcatcgtc aaaaaaatga cccagtatac
    11521 agaacgacca gcgattttgc cactttctaa tccaacaaaa ttagccgaag caactgcttc
    11581 tgatttaatt cagtggacag atggaaaagc gcttattgtt acaggtagcc cttccaaacc
    11641 agtagaatat caacatacta cttatgaaat cggtcaagcg aacaatgcac ttctctatcc
    11701 ggggctcgga ctaggtgctc ttgtcactcg tgcgaaatat attacagatg gtatgctcgc
    11761 tgctgcttcc atggctgtcg ctgagcagat ttcaccaaac aaagcaggcg cagcccttct
    11821 accacatgtg cgcacccttc gcgaaacatc gcgtgcagta gccatcgctg tcgctaacca
    11881 agctattaaa gaaaacatcc atcaagtcga attaacgaat gtcaccgaag ctatcgagcg
    11941 ggaaatgtgg caacctattt ataaaggagt ttagatatgt tttacaaaac gaagcaatca
    12001 ctagatcaac tcgtccaaaa cggctccact ccgggaatta gttatcaaat aaaaactaat
    12061 tatctggaag aaaataacat catgggatta aaatccgttt ttccagaagc agaaatctta
    12121 ccaagaacaa cagaaaacat ttatgatatc gcttctttga ccaaagtaat tgctacgact
    12181 actcgtattt tgcaacttat cgaacaacaa agattccaat taaacgaccc tattcaaatg
    12241 tatttaccag atttccggta caataatgtt acgattttac atttactaac acatagctcc
    12301 ggccttgcac aaaatatccc taacttctca atgaacaacc gagaggacgt tattcgttat
    12361 gtgtatgcca cgccacaaat taatattcct ggaaccgtag tcacatacgc cgatgctaat
    12421 tttcttttac tcggttattt gattagtaaa atggacggca attatgaaaa agccatccaa
    12481 aacaatattt tagaacccct gagtatgaca aatacaagtt ttcatcccgc aaataaaaaa
    12541 caagtcatcc caaccgaact tgaccaaacg cgcggtttaa ttcaaggtga tgtccatgat
    12601 tttaaagctt ggactgccaa atcaggcaca ggccatgccg gactttttag caccctaagc
    12661 gatctttcca aattccgaga tgcgctcatg ctacaacacg gtgctccaat tctttctgaa
    12721 aaaacttggc aactgatgca aataaatcat acccctggtc tcaatagaag tcgcgggcta
    12781 ggctgggatc tacgcggtga ttctgtctta tatcataccg gattcactgg tacttttatg
    12841 gtgctcgatt tgaaacacca agccagttta attgttcttt ctaaccgcgt tcatccaagc
    12901 cgagccaacc caaatttcgt tgacaaacgt gacagcattg tcgacacttt tttagaagaa
    12961 gttgcaaaca caacggaagt ctagcatatt agctaggctt ctttttctgc cttttgcctc
    13021 ccgccctact tcgataaaaa ctgtattaac acagctgttg aaagcctttt ctagttatat
    13081 aaaagaaatt tattttcttt ctggttttat attgttttcg ttttcacaaa ggagtatgct
    13141 gttcaatgaa gaaagattct aaagacttgt ttctggcttt aagtgaaaag gaacacaatt
    13201 gaaggaggaa attataatga caaaagcatg ggatggtttt aaaggaaccg catggcaaga
    13261 aaacattagt gtagggcaat tcgttcaaga caactacact ccttacgatg gcgatgaaag
    13321 ctttttagaa aagagcacac caagaacaac gaaactaaat gaaaaaataa ataaactagt
    13381 agaagaaatg gatgcaaaag gcggcgtact tgatatggat aacgctatcg tatccaatgt
    13441 tgcatctcac aaagctggtt acgtggatca agaaaatgaa gttattgttg gtttacaaac
    13501 agacaaacca ttcaaattag catttatgcc gaatggtggt cttagaacag ccgaacaatg
    13561 tttaacagac aacggctatt ccattgatca agaattacat gacttctacg taaaaaatcg
    13621 ttctacagca aatgatggta ttttcagagc atatacagac gatatcaaac gtgcgcgtca
    13681 ctcccatatc gttagtggtc ttcctgatgc atactctcgc ggaagaatca tcggcttgta
    13741 ccaaaaacca gcactttacg gtgtggatcg tttaatagca gaaaaacaac aagacttgaa
    13801 aaaaattgcg atttcttctg atgaaaacat tcgtttacgt gaagaaattt ggttacaaat
    13861 caaagcactt aaagacttaa tcgttttagg taacgaatac ggtttagaac ttggacgtcc
    13921 agctgaaaat gcaacagaag cggtacaatg gacttacatg ggctaccttg cttctatcaa
    13981 acaagcaaac ggtgctgcaa gctcattcgg tcgtattccg attttccttg atatctatat
    14041 ccaacgcgat ttagaaaaag gcattatcac tgaattcgat gcacaagaat taatcgaaca
    14101 attaaccctt aaattaagaa tggttcgttt tgcaagaaca gatggttaca acgaacttta
    14161 cgcttccaat ccaacattcg ttacaacttc aatggctggt atgggcgcag acggtcgtca
    14221 tcgtgtgact aaaacagatt atcgtttctt acactgctta gataacctag gaaactcagc
    14281 agaaccaaac ttaactgtcc tatgggatgc tcgtttacca gaaagcttta aagaatattg
    14341 tatgaaaatg agtgtaaaac attcctccat tcaatacgaa aatgataaat taatgcaaga
    14401 agaaggctac ggcgatatgc aatgtatcag ctgttgcgtt agcccactta acccagaagc
    14461 agacaaagac aaaggtgaaa cacataacct gcaatatttc ggtgctcgtg tcaacgtact
    14521 gaaatgtctt cttggagcta tcaacggcgg taaagatgat cttcacaaaa accaagtatt
    14581 cgacgttgta gaaccaatta caaccgaata ccttgaatac gaagaagtac tagaaaaatt
    14641 cgataaatca atggactggt taacagacac ttatgtagat gcgatgaaca tcattcactt
    14701 tatgacagat aaatacaact atgaaagtat gcaaatggcc ttcttaccat ctaaagtaac
    14761 agccaacatg ggcttcggta tttgtggatt cgctaacgta gtagatagcc taagtgccat
    14821 caaacatgcc aaagtaaaaa ctatccgtga cgaagatggt tttgtatatg actatgaagt
    14881 agaaggcgac ttccctcgtt acggtgaaaa tgatgaccgt gccgacgata tcgctgtaat
    14941 ggttcttaaa atgttcaaag acaaattaga ctcccataaa ctatacaaag atagtgaagc
    15001 aaccgtttct gttctaacaa tcacttctaa cgttgcttac tcaaaacaat gtggtaactc
    15061 ccccgtgcac aaaggacctg tatttgatga aaatggcaaa atcgtcaaag aaccagaatt
    15121 cttcagccca ggagctaacc cttctaacaa agcaaaaggt ggtttcttag ataaccttgc
    15181 tagtctttct aaattaccat tccactatgc aaatgacgga atctccttaa caatccaagg
    15241 agctccaaaa atgttcggta aaacaacgga agaacaacac cataaccttg ttggtattct
    15301 ggatggttac tttacaaaag gtggtcaaca catcaactta aacgttctta accacgatga
    15361 agtaatcgaa aaaatcaaag ctggtatccc agtaatctta cgtatcagcg gttattgctt
    15421 aaatacgaaa gatctaaatg aagaacaaaa aatggaactt tgccaaagaa tgttccacga
    15481 aaaattaatc ggttaataag aaaaaaagaa ccaaatctgc gaataacaga tttggttctt
    15541 tttttatgcg ttcgaaactt ccgccgcata agctcctgcc gtgtgcccag tcactagcgc
    15601 acaagtaata ttatatccac ccgtataacc attaatatct agtatttccc cgcagaaaaa
    15661 taatccttcc atcaacttcg attgcatctc ttttggttta atttccttta cagaaacccc
    15721 accacctgtc acaaacgctt tttcaaaatc aagcgtgcca ttcacttcaa aagtgaaatc
    15781 ttttaataac tgaataaact gctcgatttt tttcgggctt acttgtttat aatcagccgt
    15841 ttcatctaag tctgcttttt caagtaaaaa caataacatt ttctcttgta aaagcgaact
    15901 taacgaattt ttcaaggctt tcttcggatt ctcttctaac aatttataca catctttcga
    15961 aagttccgca gcggatacat tcgggaataa atcaagacgc atcttcaccg tgctagcgcc
    16021 tgttttcttt aattctcgaa ggacgaacat actacaacga agagccgctg gtcctgacac
    16081 accaaaatgc gtgaaaatca tatccatttg atgcgtaata atcggcttcc cttttgcatt
    16141 taaaacagaa agggacacat cacgaagcga cgttccttgt aacacttttt gtttaataaa
    16201 aggctcacta gacgtaattg gcacttctgt cggataaagt tctgtgatgg tatgtcctgc
    16261 ttttttcgcc caagcatagc catctccggt cgaaccagtc cgtggaacag atttaccgcc
    16321 aactgcaaca atgaccgcac tcgctgaaat ttcttggccg tctttcagcg tcaccccttt
    16381 cacatgtcca tcctcataat ccacttgttt cacggctgtt tgcatgtaaa tttttacgcc
    16441 tagtttttcc atccgctgaa tcattgcctc agcgacagaa cgcgcgctat tcgatacagg
    16501 aaacattcta ccgtggtctt cttcttttaa cgccacgcca agtctttcaa aaaagcgaat
    16561 aatatcttca ttatcaaagg catgaaacgc actatataaa aagcgaccat taccaggaat
    16621 atgtttaata atttcttctg ctggtcgcct gttcgttaca ttacaacgtc cgccaccaga
    16681 cataattaat ttacgtccca attttggtcc tttttcaatt aatagtactc gtttattttt
    16741 ctctgctgca ctgatagccg ccataagtcc agatggcccg ccaccaataa caattacatc
    16801 ataatccatt gtcccgctcc tttactttat ccgtgtttaa gtatagcaag cattcggctc
    16861 agtgccaagc ttttttcacc aaacaaaaaa cccaagaaaa atctcaggtt ttttgattct
    16921 aatttcgatt catattcgta aagataagta gcaatcttag aagttctagt acagctacgg
    16981 ccattgcagc aacataagtc attgcagcag cacttaatac ttttttcgct tgtgggagtt
    17041 ctgaagatgc gactagtccg ccgctttcta attgaacaag tgcccgttta ctagcgtcaa
    17101 attcaactgg taacgtaatt aattggaaaa gtacacccac tgccatcaaa ataatcccca
    17161 gcaacatgaa actagcaacg tttgcaagca ttccgataat taagaacacc caagaaatat
    17221 tggaactaaa cattgttaca ggaacaagcg ccgaacgaaa acgcataaat gcataatctt
    17281 gctgatcttg aatcgcgtgt cctacttcat gggctgcaac agctgccccg gcgatagaac
    17341 gaccgcggaa gttagcttca gaaagaaaaa ccgctttttt tcgaggatcg tagtggtcac
    17401 ttaatattcc ttttgtttca tgaactggaa cattcgttaa accattggta tccaaaatat
    17461 gacgcgcaac ctcggcacca gttaaaccat ttgccacacc aactttggaa taatgtgcat
    17521 aggtagtttt tacccgatac tgtgcccaaa gtggaattgc cgcgacgata ataaaataaa
    17581 taatatactg actaaacgac atttaatcat cttcctccta ctactttttt tcggtgaata
    17641 tccttatgtt cttagtataa attaactatc accaagactc aacctctttc actcatcatg
    17701 aggaaattct aatgttaagt gcttattttt tatcgtttta tcatatacaa accatagaac
    17761 aaataccgtt aaccaaaatg tcgcataacc aatttccggt aagtattttt ctaaccccat
    17821 ataaatcggc atttggccaa atacataatc aattacatca ttatgaaata cccataccgc
    17881 tgcaatcata aagtgcccga ttcgaaaacg ataaaacggc gcataaagaa ttccttctac
    17941 tgccataaaa ccatgcgtca aaatcaatgc cacagagccc caaacaagca tcccttggtc
    18001 aatcatataa aaaatattca taccaactgc ccataaacca tacttcacta aacatacaaa
    18061 acctagtgcc tccattaaag gccaatgctt tttcccaaga aaagcaacta gcgccaaagt
    18121 gaagaacaaa atcgccgttg ggctatcagg tacaaacagc caaaagcgcg gctctgtcat
    18181 ttgtaattgc ggtaaatacc atatgtatcc ataaatcgct ccaagtaaat taccaaagaa
    18241 aagtaatcgt aaaaaggccc gatttgcgag taaactatat aacaatatcc cccagctccc
    18301 ttaaaaaatc ctagcacagc aaggaaatga tgcatctttc acatcatttc catactaact
    18361 aggatttatt tcttattctt tttccgtatc catttgctgt aaaattcgaa ctaacttatg
    18421 aaaagcagct tcatcacgtg tatccagcgc ctcatcgatc tgttgtaata ctttttctct
    18481 tgaaaattgg tgcacagatt gataaataag cgcatccgcc atttcttttt cctcatccgc
    18541 aagcttcact gctgtaaaag gattatcttc acgaacaagt gcgtattcag gcgaagacat
    18601 tgcctcttca aaatgaagtt ctacatacaa ctcttcgtcc caatttaacc gaatatcatg
    18661 aaatgctttt tctggatcag tcgtcataat gttaccttta aaaaatagga acggttcgga
    18721 ttcaacgccg tgagcactaa gtgaaagccc acgcgcacac ccttccaaat tatcaacaaa
    18781 atgaacatat tttacaattt gatcatggcc agcaatataa tttaaaaccc acattgcttc
    18841 tctagtcttc atctggtgtt tatttaaaaa ccagcgaata aaatctttct tctcgtctat
    18901 tgaaatggat gccttcatct ttcctcagtc ccttcctgta ttctttttag catttaatca
    18961 aataaagata aaatctctgt gtcttctggc tctagttcta aatagttacg caaaacttct
    19021 tgtgatttcg cgtactctcc ttcttccctt aaaaataaac catattcctt taagaaagta
    19081 ggattgtttg taaagtgcga gtatgccagt tcataatttg cttttgcttt attatattgt
    19141 tctgtttcct gatatgcaac acttacgtcc cagaaaattt gtggttccga aataacttct
    19201 tccccaaggc cttccactaa ttcgataacc ccttcgtagt cttctttcgc aagtaataat
    19261 ttgttcaact gcataattgc ttccgaatat tcttcatcta gcacaattgc ttgacgataa
    19321 aattcttcgg cttcttctgg caaacgtagc gtaacagcaa gcttcccagc ctctaagaac
    19381 atttctttat taaattcatc ttgcgttaag ccgtcccgaa gcactgcaat ggctttttcc
    19441 ggttcgccgt tctcctcata acttttcgct aaataagagt agagcgttgt gtaagaggga
    19501 tcatgttcac gcaaatgttc gagcgcatga atagctttcg tgtaatcttt tgcctgataa
    19561 gccgttaaac ccatcccgaa aagtgtatca accgattcct tatcttcgag cgcgcgttca
    19621 tagtaagata acgcttcttc aaatgcccca ctagcagcaa aagcttcagc gatacgttca
    19681 tatacagaca ccgcaccatt cgaaataatc gttaatcctg cttctacagc agtttgataa
    19741 gactgtacag cggatgcgaa tcttgcttgc gataaataat attccccaag tgcaaaatca
    19801 ataatcggct catttggcgc catttgtttc gcttcgagta atttctgctc actgacttcg
    19861 aataaacctt gcatctgata taaatcagct aatacgagca aactttcaat atatgcttca
    19921 tcttctttgt ttactttttc taaatagtct tgcgcagagt cgatatcgtc tttttcaagt
    19981 gctacttcag ctgcacggac aagcaactcg ccctcatcct tgtattttgc taatagaagt
    20041 tcgtataaat cttccgtttc atctaggaat ccaagtgtaa ataattcttc tgctaaataa
    20101 tattgttctt catctgttcc cgcttgcact acttcatcaa aatatttctt cgcaagcgcc
    20161 atatcttcat gctctaacgc atgtaacatt ttattagcta attccatttc tgcaccttct
    20221 ttaataataa gtcgtttttc tattatacca ttacttcact cataagaaaa agtgattgcc
    20281 tctcttaaat aaaaatacca gcgctgatgt gattagcata cagcactggt agaagtgatt
    20341 attttaaaag tgagcgaata tcttcaaaga aagtcgggta agaaacagaa actgcttctg
    20401 ggcgttctaa ttccacatcg ccttcctcga caagaagtgc tgcaatttgt agcatcatgc
    20461 caatacggtg atccccgtag cttgttacat tggccgcatg aagtggtgtt ttcccgcgga
    20521 taattaaacc gtcttcggtt ggagtaatat ctgcgcccat tttgtttagt tctgtcgcaa
    20581 ccgcatcaat ccggtttgtt tcttttactt ttagttcagc agcgtcttta ataatcgtcg
    20641 ttccttctgc ttgtgtcgct aaaagtgcga taaccggaat ttcgtcaatt aaacgaggaa
    20701 taatgtcgcc accgatttcc gttcctttta aatcgctagt tttaactaca accgtacccg
    20761 ctaatttacc agtacttctg ctagaatctt tgacaactaa acttccaccc atttgctcaa
    20821 ctacatcaaa aatccctgtt ctagtagggt tcaagccaac atgcgtaagt tcaatttcac
    20881 tgccgggtgt gattaagcca gctacgataa agaacgcagc agaggaaaca tcgcctggaa
    20941 ccgtcatttc ttgcccagta aatgtttggc cacctttgac gcgaatggtt aagccatcca
    21001 tttcaatttc accgccaaat tggcgaatca tgtgttccgt atgatcacga gtcttttctt
    21061 tttcatggat aatcgtttca ccttctgctt gtaaagctgc aaaaataatc gcgctcttta
    21121 cttgtgcact agcaactggc atatgatatt ccatgcgttt taatgattgc ttcccattta
    21181 tcgtaattgg agcaaattca gagccatctt tgccatgcat ttttgccccc atttgttgca
    21241 gtggtagcat gacacggttc atcggacgtt tcgcaattga ttcatcccct aaaatgactg
    21301 tgtcaaaatc tcggccagct aaaatgccca tcattaaacg aatcgttgtt cccgagttac
    21361 caatatcaag tggaccatct gcctgtttta gcccatcaaa accagttccg tgaacaataa
    21421 tttcttcttc ggtttcttca atttttacac ccaatgcttt aaatgcctta attgttccaa
    21481 ggcaatcatc tgcacgtaag aaatgacgaa tgaccgtttt tccttctgca atggccccga
    21541 acataatgct gcgatgggac attgatttat ctccagggac tgtgattgcg ccaaccagcc
    21601 cttgtttatt tgtaattaat ttcatcgtca tttctctcct attcgtaatg gcatgtatag
    21661 ttacttcttg tttcaatgca acgtttcgcc cggtccctgt cttcatccga ttggaaagta
    21721 atttgtaaca caccgaaaat atcttcccgt gtttccaaaa tcttgatgtt tgttaaactg
    21781 atttcttctt cgcccagata cctagtcact tcagaaatta cccctggata atctggtaca
    21841 tcgacaaata aatcgtaaaa agatggaatc gcaccacctt gatgaactgg aagtgaatct
    21901 cgaaattctt ttgccccatc aaaaaaggca tatatagaac tcgcgtcttc actttcaagc
    21961 atctcaagcg cttcgttcat actgtctcgc caaatcgtca gctgtttcgt taacgttttt
    22021 tggttgctaa tagaaatatc cgtccacatt cttggatcag aagaagcgac ccgtgtaata
    22081 tcacgaaatc cgcctgccgc aagtcgaaat gctgcaggat gttcttctgt aaagctttgc
    22141 gtctggttca ctaaagccgc cgccacaata tgcggtaagt ggctcaacat gccagtaatt
    22201 tcatcatgct catttggtga taacactaag aacttagcat tcgtaccaga cagccacgtc
    22261 ctaagttcag ccactttgtc ttctgctaca tctttcgttg gtgttaacaa ataataggca
    22321 ttttcaaaca acagttcttt agcagcacgg acaccacttt tatgcgaacc agccattgga
    22381 tgaccgccaa taaacgtaat accactttct ctaagtgccg tggatgcttc catgatggtt
    22441 ccttttgtac tacctgtatc tgtaacgatc acattttcct ttaaacgcag ccctggtaaa
    22501 cgcgttaata actgttctgt ttcttttacc ggacaacaaa aaacaagtaa atctgctttt
    22561 ggcccatcta ttaaaatact ttcgccaatt tcgtcaatca caccgagaga ctttccaact
    22621 tctaacgaat gataggaaac gtcaattccg atgatatgtg cttctgggtg tttggcttta
    22681 atcgcaaggg caatagaacc gccaattaac ccaagcccaa caataactac cgtccctttc
    22741 attcaaaaac gcctccaaac acttacaata atttttctaa aagtgcaatt accgcactat
    22801 tttcctcttc ttttccgatc gtaattcgaa cagcagttgg aaaaccaagc gccgcgccag
    22861 aacgcgtaat atagccattt ttttccaagt agctaaaaat agttcctgct tcaattccta
    22921 aatctattaa aacaaagttg ccattcgctg gatacagttt tacttgctca aaacgtttcg
    22981 caaacgcttc gtattgttta attccatttg cattagaagt tcggcatgct tcaataaaag
    23041 cttgatcctt tattgcttct attgctaatt tttgaccgat gctcgttgta ttaaacggcg
    23101 gacgaacgat atttagttgc tcaatgattg ctttatccgc aataccataa ccaacacgag
    23161 cgcttgccaa accataaatt ttactaaagg tccgggtaat aattaaattt ttataagtgc
    23221 gaattagttt ttcatgtttt tcaggctgcg gcgtcacata ttcaatatat gcttcatcta
    23281 aaacaacaag tacatcactt ggtactttat ctaaaaacgc ttgaatatct gctaaatcaa
    23341 tgtaattccc agttgggtta ttcggattgc aaacccaaac aatcgtcgta ttgtcatcaa
    23401 tcgcattcaa cataccatct aaatcatgcg caccatccac aagtagcgga atttctctta
    23461 cttcggcgcc ttcgattaac gcattttgac gatactgcac aaatgtcggt gtcgccatca
    23521 ctgtattttt tgtcgtatcc agtaaaaccc gcgtcaacag ttcaatcagt tcatccacac
    23581 cagctgtaaa aatcagttcc tcttcttcca gttggtagaa atcagcgacc actgtacgca
    23641 agctagaagc ccagccatct ggataaattt ctgtttccac actagaattg gcttgaagct
    23701 ccgccacttt tggagaagtt cccagtgggt tttcgttaga tgatagtttg gtgattttcg
    23761 ttaaaccaag ttctgccatc acttcttctt cgcgttttcc aggtttataa gaagatagac
    23821 ctgtaagtga ttttttccat ttcattacgc atcctcctct tttactaaat ctgggcgcag
    23881 tacttttgct cctcgtaagt agacatggtt gatggcttcg agtggtttat gtagatctgt
    23941 gaataccatg aaacgaatgc acattggaag cgaatttggc accggaattt cttgcatccc
    24001 catgacagga acatattcaa agccaggtgt ttcacgcacc gccttagctg gaaaagcggc
    24061 aaaaatatct tctgtcactg taatgatgac ggatgttagt tgctcactat ctgttatttc
    24121 attttgcgtt aaaatttctt caaataattc tttcgtcgct gcataaattg cttccggtga
    24181 attagtttct attgtcgttg cccctcgaat tgctctcaaa tgccattccc tccatttcgc
    24241 atcacacgtt tgtaagtttc aaaaatcaaa tcatcttccg ctttaaaaat aaccggttct
    24301 ccaatttctt cgagtaaaac catacttatt tcattaaaag ttgttttttt atcatgacgc
    24361 atattttcca gtattttatt aaatggaaca gttgcatcaa atgtcgtatc atagcctaac
    24421 tgttttagcc acgttttaaa ttctgctaaa tcgaaatcca gtccgtaaat tgtctcactc
    24481 atcgtgagtg cataaatcat cccataagta atcgcctcgc cgtgcagcca cttgccaaag
    24541 tttccgtagg cttcaagtgc atgaccaaat gtgtgaccaa aattcaaata agcgcgcacg
    24601 ccttgctcgg tttcatcttg cgcaacgata tttgctttaa tttcaatccc acgttgtaaa
    24661 aacggcgtca aatccttcgt ataaaagtct ttcggctccg taaatgtatc cattaaggcc
    24721 cgtagtaacg tctgatcgct aataagcgca tgtttaatca tttccgcaaa accagagcgc
    24781 atttcccgtt ctggcaaagt agcaaagaac tgggtatcat aaatgactgc ttctggctgg
    24841 taaaagttcc caatcatgtt tttgccaagc ggatgattga tcgcaacctt gccacccacg
    24901 gcactatcat gcgcaagaac cgtcgtaggc acctgataaa aaggaatgcc cctcatatac
    24961 gtagccgcaa caaaaccacc taaatcacca ataacgcctc caccaaaagc aattaaaacc
    25021 gctttacgat caagacctgt ttcaatcaat tttgtcatca catcttcata tacacgaaac
    25081 gttttcgctt cttccccgtt tggcgccaca taataagtga ctacaggtaa atcagcgaga
    25141 accgcgtcaa gctttgcttt atgaagttcc gccacatgct cgtctgtcaa aacaaacaca
    25201 tgggaaaatt tagctaggct ctccgtccac ttttcccgga catcttctaa tgcgaattca
    25261 ttaatatata ctgggtatgt tttactttta gcacggactg taatttctgg catgtttaaa
    25321 actccttcgt taagtttcgg tgttcctcca catgtttttt aagtgtgtca aaacgatcac
    25381 catcaaattt ttctaacaca gcaactgcaa cttcccaagc gacaacagct tcagctacca
    25441 cacttgcagc aggtactgca caactatccg aacgttctac acttgcatta aacgtttctt
    25501 ttgaatcaat atccacactt tgaagtggtt tgtataatgt tggaattggc ttcattacgc
    25561 cacgaacaac aattggcata ccattggtca ttccgccttc gaatccacca aggttatttg
    25621 tacgtctcgt gtagccatct tctttactcc ataaaatttc atccatcact tcactaccag
    25681 gttttctagc agcttcaaaa ccgacaccga attcagcgcc tttaaatgca ttaatactta
    25741 caatcgcacg cgcaattttt gcatctagtt ttttgtccca ctgtacgtag ctaccaagtc
    25801 cagctgggac accaccaact acaacttcta cgataccgcc aatggtgtcg ccatttttct
    25861 tcgcatcatc aattttttgc atcatttctt ctgccgctac gccgtctaaa caacgcactg
    25921 gagaagcttc ggatgtttct tgaatttcgc taaccgcgta atcacgtgtt aagttcgcac
    25981 gagttccacc aatttcaagt acatgaccag ctacttcaat gccaagttca tgcaataatt
    26041 ttttcgctac tgctccagct gccacacgga cagtcgtttc gcgcgcgcta gaacgttcta
    26101 gtacgttacg catatcgtta tgaccatatt tcataccgcc aactaagtcc gcatgtccag
    26161 gacgtggacg ggatacgcga cgggattttt catttttttc tggaactggt tcaatgctca
    26221 taaccgtttc ccaatgcttc cagtctttat tttcaacaaa cattgctaca ggtgcgccta
    26281 atgttttacc atgacgaatc cctgctgtga tttgtacttg gtctttttcg atacgcatcc
    26341 gtgccccacg accatgccca ccttgtcttc tttttagttc tttatttaca tcttctgcta
    26401 gtaaaggcat tcctgctggc aacccttcaa taattgttgt aagccccggt ccgtgtgatt
    26461 ctcctgccgt taagtatctc atctgctcat ctctcctttt tctatttcag ctagattttc
    26521 tagcgtttat attttagcgc tttaaagtat atgtgtaata tcttaacata tgccacgcga
    26581 gaaaacaata ctttcgtttc attctttcat cttaccaaaa aaccgcatga aatggtaatt
    26641 tctctataaa aaaagagcct aggtttccct aaactctata ctatgttaaa tccaagtgtc
    26701 gattgccttt tgataactta aaatttcctg cggtgcaaaa aacaactgaa tttcccgttt
    26761 cgcactttct gggctatccg atccatgaat cacatttcga tttgtatgta ccgcataatc
    26821 agcgcgaatt gttccggggt cagcttctaa cggatttgtt ttgcccatca tacggcgagc
    26881 tgttgcaatc gcatcatctc cttctaacac catcgcaaac actggtccag aagtaataaa
    26941 tccaattaaa tcctcgaaaa aagattttcc aatatgttcc gcgtaatgtt tttctgctag
    27001 ttcacggtca atttgcatta attttccagc aactattttt aagccttttt tctctattct
    27061 tgtgacaatt tcaccaataa gtcctcgttc tactccatcc ggcttaacca ttacataagt
    27121 ttgttccata aagaatcctc cctcacgtta ataatttctt ttatctaaaa cacgaacgat
    27181 ttgttttaat ggttttaatt caggcacttg cggcaaagaa tccagtattt ctacagcttt
    27241 ctttaagtag gctgttgcta catcttcggc ctgttttgcg cccgcttttt tgacttcttc
    27301 cactaaaaca gcaatttctt ctgctggagt ttcctccgta acctggctga tgcgtttttt
    27361 tagaaaagga tcttccattg caaagaatac tggcaatgtc acatttcctt gtcttaaatc
    27421 ttccccagct ggcttaccga gttctttttc tgttccaaca aaatcaagta catcatccgt
    27481 aatttgaaac gccatgccaa cataataacc aaaacgatat aacttctgat aatcagcttc
    27541 actttgacca gaaacaacac caccgagtcc gcaactagct gctatcagta aagctgtttt
    27601 ccgtttaatt cggcgtaaat aattacgcac actttggtca aaattatatt tatcttttaa
    27661 ttgttcgatt tcacccgtag aaagctccac cgtaacatgt gatagcattt tatgcgcagc
    27721 aacgtcttta atttctgtca tatattccag tgatttggca aacaaaaaat caccggtata
    27781 catcgcaata tggttgcccc acttcgattt aatcgtctcg cgtccgcgtc ttaaatccgc
    27841 attatccacc acatcatcat gcacaatcga cgccatatga attaattcaa tcgctacact
    27901 cgcatttttt actgcatcaa agtctgcatt aggagcaagt cttgctgata agcaaacgaa
    27961 cattggtcta attcgttttc caccagcctc taataaatga agtgctgcat cagaagtagt
    28021 ttcagcagct gcgccagaaa gggccttttt aagttctttt tcaactgagt caatgtcttt
    28081 ttgcatattt gcatataaaa agttaagttt catgcttgcc accttattgt tccttctttt
    28141 taaatccaaa gtgggttgca ctcgcgccgc cactgtgtga aatatatctt acgtatgaaa
    28201 atccggcttc ttgaaacatt tccgcaagtc tagccattcc tggaaactca cgcgttgatt
    28261 cttgtaacca gctatattct ttataacttt tcgcaaaaaa cttcccgaaa acaggcatta
    28321 catagcgaaa ataagcatta aacacttgtt tccagccagg aatattgggt tgagacgtat
    28381 caatacatgc cagctgtcca cctggtttta gcacacggta catttctcgc agcacttgca
    28441 tataatccgg tacatttcta agcccaaagc caatcgtcac atagtcaaaa ctattatctg
    28501 gaaaaggtaa ttccattgca ttcccatgaa taagttctac attgtgcaaa tccgcttctt
    28561 ttactttttc gcgaccaacc ttcagcatat tttcactaaa atcaagcccc gtcacatgac
    28621 cttcaggacc aatttcttcc gccatcataa tcgaccaatc tgccgttcca cagcaaacat
    28681 caagaacatt cgtccctttt tgaacacgca ttagcttcat tgtctcttta cgccatttca
    28741 catgtagttt aaaactaata acactattca ttcggtcata acttggagaa attttctcaa
    28801 atactttatg tactttttct tctttagttt ccgtcatatc ccgaatctcc ttctatttat
    28861 cagtcgttaa taacttcgat gattcttttt cctagtatat tagaaagcgg ttctgattta
    28921 tctttcaacc gtttcacttc acttttcaca tcatgaataa ttgctactaa ccagctttca
    28981 aaattagata cagcttcctt cgcaaaatag ccatgatcaa acgcccgctt caatctagac
    29041 gctccaattt ctttgtaagt agcaagttct gtttggagtc ttttgagcaa aaagaactga
    29101 caaccaagcg cgataaatgt gtcatctttc ataaaatact tcgcaaactt ggcaaaaata
    29161 gccgcatttg ttaacgtaag ctgagataaa tactcttcat ctgttgcgac atgtaactgg
    29221 taaatattgg tttttgctgt gtttgtttct tgaaccccgc tttgcaatgc tcgaagcagt
    29281 ggaatcattt ctaattcagc aagtgtgcgg taatagagag cactataaaa atccccagcg
    29341 agaaccgtca actcttgctc cttacgtgtt agctgtacaa catcgcctgg ttcatcaatt
    29401 ttttcatgtg tatcatgcgc taaaatcatg tacagcgttg cactaacgac gcgatatgca
    29461 gaagcatcag tcaaatcaga gccagaaatc gcttcatgaa gaaatagcat ttgatctttg
    29521 tccatttgcc cgccttcatt attctcttgt aaatattgat agactgcttg ctcatgtacc
    29581 aactgctcca cttcctttag cccagcctct cttgcctgat aagtcattta acaatcccct
    29641 ttgaatctcc ttattatgta aaaaattata ccataaagga tatttaatta tgcttaatta
    29701 aagctaaaac ttcacttcta agcttatcgt catttttaaa agcaccacga acagcacttg
    29761 taattgtttt tgttccaggt ttatttacac cgcggatagt catgcacata tgctctgctt
    29821 ccatgatgac cattacaccc aacggtttta gtttttccat cataatttct gcaacagtcg
    29881 ttgtaatccg ttcttgtaac tgcgggcggc gacttacatc atccactacg cgagcaagtt
    29941 tactaagacc agcaactctt ccattttgtg gtaagtatgc tacatgagct actccaaaaa
    30001 aagggacaag gtgatgttca cacatagacg aaaagcgaat gtctttcaca agtactaatt
    30061 cttcatgttg ttcttcaaaa atagtatcga aatgaacaga aggatctttt ttcagcccag
    30121 cgaaaacttc ttcatacata cgagctactc gcattggtgt atcaatcagt ccttcacgtt
    30181 ctggattttc tcctactgct tctaaaataa cttttaccgc gtcagcaatc ttttgcttgt
    30241 ctatttgctc catccttaat tcccctatct ttttagcatt atataccttg tatatcttaa
    30301 cacagccaaa cttcaaggta aatttaattt gcttgaataa gtgataataa taggggtttt
    30361 tttgctttcg taagtatatt ccctatttct aaaacagaaa accactaaaa atgggcataa
    30421 aaaaactagc ctagcttaat tataaaatta aggccagact agagttagtg cttaaaagtc
    30481 tatgtagctt atttaacagc ttctttaagc gctttaccag gtttgaaagc tggtacttta
    30541 cttgcaggga tgtcgatttc ttctttagta cgagggttac gacctttacg ggcagcacgt
    30601 tcacgtactt caaagttacc aaatccgatt aattgaactt tttcaccttt agataaagaa
    30661 gtttgaatag tttcgaatac agcttctact gctttcgctg cgtctttttt agaaagatca
    30721 gctagttcag caacgctatt tactaaatca gttttatttg ccattgtgtt ttcacctcct
    30781 tcacagaata ctacaaaata agcaggtaca agatatacct gtatttctct ttttttccaa
    30841 aaacaaaaat caatttggaa atctaaggag aatcatgact gaaatggctt aactacaagc
    30901 cttaacagta attctgataa aagattatca cataatccct acaactgcaa ggaataatgc
    30961 caaactgaca ccgtttctta acattttcaa tcacaaatat tttctttaaa tgcttgaaaa
    31021 cgtgatagta tcaacctgtt atccataata ctaacttgga agccttagaa tagcaagcga
    31081 taccaccaca attagctaaa atagttcttt tttcataaaa atatgggtaa atttgcgtct
    31141 attacctgaa aactctaggt ttctgagcct agttttattc taacatttct ttttggaaag
    31201 ctgctttttc tgccgcagta attccaattc ctttttctaa ataattagct actgagccat
    31261 attgtttttt catttcatca aaggcaattt ccaaatattc aggacgagct tctgccattg
    31321 gcctgaacgt ttctaaatca attttttcgg ttccattcga aaagagcgcc acgattcctc
    31381 ccatttcttg taaaatgtcg tcctggtagc gattagtgat ggcgtaatcg tcgaaaatcg
    31441 ttttttctgg tacatctaac aatgttagta ataatgcccc taggacgcct gtacggtctt
    31501 ttcctgcagt gcaatggaaa acgaacggca atccagcttt tgcatcttct aatacttctg
    31561 taaaaatttc tctaaagcct tccactgatt gcacaaacac gcggtagctt tcacccatca
    31621 gcggttcata aatagttgta tcatttgtta ccggtagctt tgtttcttca tttttggcag
    31681 taccaatagg aatatgttta tttagcacac cttcaattgc aggcgtaggt tgtgcttgta
    31741 cttccgaact actgcgcaaa tcacaaatcc atttaatatg tagtttttga agcaaagctg
    31801 catcgttctc attaatattc actaaattag aagagcgata taacttaccc cattttacat
    31861 gcttgccgtt tttggatgca taaccgccca tatctcgaaa attgaataca ctttcaagtg
    31921 gcaaaattcg ttctgaaaca gtggttctat ctccgtttgg tgtctctaaa aagaaataaa
    31981 taggaatatc ctttgtgtca tatgaatagt gatcaacatc atttgttact ttgaaaacag
    32041 gatcactatt atcctctagt ttaggactgc tacttacaaa aacgactgtg ccttcgctga
    32101 cttcttcttt gttccaagtt agtgttacgg ctttatctgt acgagtaact tccatattat
    32161 ccacctactt tttattattt ggctcttctg ctacatttta gcatatttca taaaaaaaga
    32221 gccaaaataa gcggatagcc cattctgact ctttctatta aaatgattct ttttcgatct
    32281 ttttttcgcg acccattaat aaatcaactg cttcgcgagc atctttattt tcgaataaaa
    32341 tcgcgtaaat cgattcggta attggcatat caatatctag ttttttcgcc caaccatgta
    32401 ctgctttagc tgttcgaaca ccttcaacga ccatgcccat tttttctaat acttcatcta
    32461 aattctcgcc tttacctagc atattaccag cacgccaatt acgtgaatgc acactagtac
    32521 aagtaacgat taagtcacca atacctgtca atccgtaaaa tgtttgcgga ttagagccaa
    32581 cagcaacacc gagacgagtg atttctgcca tcccgcgagt cattagtgcc gctttagcat
    32641 tatcgccata accaaggccg tcagaaattc ctgcacctag tgcgataata tttttcagcg
    32701 cgccaccaat ttctgcacca atcacatcat cattcgtata aatacgcaaa ttattattga
    32761 tgaaacgatc ttgaacaatt tctgcagctg ataaatcttt acagctcgca caaagtgttg
    32821 tcggatgacg aagcgcaact tcttccgcat gacttggtcc agaaagaaca acaagcgctt
    32881 tacgtttgga cgcatctatt tcgtcttcaa tcacttcgga cattcgaaga tttgtttctg
    32941 gttcaatacc tttactcaca tgcactaaaa tggttggttc ttttagcgct tcatttaact
    33001 gcttacaaac gattcgcatc gcatttgttg gaatagcaat tacgacaatt tctgcaccat
    33061 caatagcttc atcaagtgac aatgtcgctt ttacctcagt tggtaaaata atatctggca
    33121 aatagtgact attcgtgtgc gattcgttaa tttcattcac aattttatct aagtttcccc
    33181 aaataactgg ttgatgatta ttatcagcta ggacaagtgc aagacctgtt ccccaacttc
    33241 cagcgccaag aatagctact tttttctgtg tcattatatt tttcctcccg aaaactttac
    33301 ttacgcttac gagcaatcac tcgaattggc gtaccctcaa acggaaatgc ctctctaatc
    33361 cggttttcta agaaacgttc atacgagaaa tgcattagtt ctggatcatt aacaaataca
    33421 acaaacgtcg gtggttttac agccacttgt gttgtataga aaatcttcag tcgtttacct
    33481 ttatccatag gtgatgggtt cattgcaacg gcatcactaa taacatcatt cagcatactt
    33541 gattgtacac gtaatgaatg gttatcgctt acttgattaa taagtgggaa taggttattt
    33601 aagcgttgtt ttgttttcgc agatacaaag acaattggtg catagcttaa gaattggaat
    33661 tgctcccgaa tatcttccgt ccatacgtta attgtttttt catctttgtt aattgcatcc
    33721 catttgttta ctacaataat aatcgcacgt ccggcatcat gcgcatatcc agcaattcgt
    33781 ttatcttgct cacgaatacc ttcttctgcg ttgataacca caagaacaac gtctgagcgt
    33841 tcaattgctc tcattgcacg taaaacacta tatttctctg tgctttcata cactttccca
    33901 cgttttctca ttccggctgt atcaatcatg acataatctt ggccatcgaa agtataagtt
    33961 gtatcaattg catcacgagt tgtacccgca atatcagaaa caataacacg atcttctcca
    34021 agaagtgcat ttaaaataga agatttacca acatttggtc gaccaatcaa actaaatttc
    34081 actgtatcgt ctggatattc ttcctcttct tcttttggaa aatgagcccg aacagcatca
    34141 agcatgtcgc caagccctag cccatgtgaa ccagaaattg gatacggttc accaaaccca
    34201 agagaataaa agtcataaat ttgatctcgc atttctgggt tatctacttt attaatcgct
    34261 aaaacaattg gtttattaga ccggtaaaga atttttgcta cttgttcgtc tgcatcggta
    34321 accccttcac gaccattggt aataaaaata attacgtctg cttcatcaat tgcgatttcc
    34381 gcttgtgcgc gaatttgctc taagaatggt tcatcggaaa gatcaatacc acctgtatca
    34441 ataatgttaa attcttttcc aagccattcc gctgaattat atatgcggtc acgtgtcaca
    34501 ccgggaacat cttccactat ggaaacacgt tcaccaacga ttctgttaaa aatagtcgat
    34561 ttgccaacgt ttggacgtcc gacaatcgct acaactggtt ttgccattat ttcaccttct
    34621 tttttctcga atcctattta tcaaactttc tttagtttat cagtaaaaca gcttactggc
    34681 aatgaaaagt tcgatttgaa aaagaaaaag agcccatggg aacagtctcc ctaggctctt
    34741 ttgcgtacaa ttatttatcg tcgttttgaa gaccttttaa tttatcacca attaaatcgc
    34801 tcatttggaa tccagtgttt tcttctggaa gttcataatc agcttcttca actggagcat
    34861 cttttaattc tttaatgctt aatgataaac gtttgtctgc ttcatttact tcaagtactt
    34921 tcacttctac tgtttgccct tctgaaagga cttcttgtgg tgtcccaata tgttcatgag
    34981 aaatttgaga aatatgaacc aaaccttcta ctcctgggaa tatttccaca aatgcaccaa
    35041 aagtaactag gcgtactact tttccttcta aaacagaacc aactggcgct ttttcggcaa
    35101 tgccgtccca aggtccaggt aaagtcgctt taatagaaag agaaatacgt tcattttcag
    35161 gatcaatccc aataacttta accgttactt tttgaccttc ttctaacgct tcttgtggtg
    35221 ttgcaatatg tttataagaa atttgtgaga tgtgaactaa tccgtccacg ccaccaatat
    35281 caacgaatgc accaaaatta gctaaacgtt gaacagtacc ttcaatcacg tcgccttctt
    35341 tgatttcgct cagtagcgct tgcttttgac tagctttttc tgtttccaca actgcacgat
    35401 ggcttaaaat cactcggtta ttttctggtt caaattctac tactttgaaa gtaagagtag
    35461 ttcctttgta atctgcgaaa tcttccacaa aatggtcttc cactaaagaa gctggaacga
    35521 acgcacgaac acctaggtcg acaactaatc cacctttaac aacatcactg actactgctt
    35581 caaaaacttc accagattcg aatttagctt taatatcatc agatgctttt tctgcatcca
    35641 cttttcgttt agataaaaca agtatatcgt cttctacttt agtgacaatc aaatcaagtg
    35701 tgtcgccaac gctcacaacg tcagaagctg tctccacatg tatattggaa agttcactta
    35761 ttggaacgac accatcaagt ttgctacctg gaataccaac ataaacttgt ttatcttcca
    35821 cgcttgtaac tgtgccagtg actttgtctc cttcttcaaa atttctaact tccacatcaa
    35881 ataaatcttc agacatgtgt agccctccat tcgttagtcg aattttagga atttctaatt
    35941 cagaagcaac cttcacgctt gcttcatctg cttgactagt tttcctagat aggcaaattc
    36001 cgattaaata aagaaaaata tcaaatacac cttctgtaaa actgatcttc cagctagaaa
    36061 atcctttcaa gatacttttc acaaagtaaa aaatctctct tataacatcc tacaaatcca
    36121 gacatttgtc aagctctttt aaggggttgg aaaagcctac agggcgtgaa atcgcttcgt
    36181 ttgtttagcc tttcacggtt aaattaaaaa agtgctacat ttccatttag ttaagaaaat
    36241 gtagcacttt tttgctaatt attgattttt agttctgcta gtgaaagaat tttattggct
    36301 acttcatcaa tcgacattga tgttgtatct acttcaatgg catcatctgc tttttttaag
    36361 ggggagtgtg ttcttgtata atctaaatga tctcgttctt caatttcttt tttgagttgg
    36421 cctaaatctc cagcaaaacc tttcgccata ttctctttat agcgacgttc cgctcgttct
    36481 tctacgcttg ctagtaagaa tatttttagt tcggcgttag gaagaactgc agtaccgata
    36541 tcacgaccat ccattacaat tccgccttct gtagcaaaaa cttgttgacg ttcttggagt
    36601 gcttcacgaa tagacgggtg tgcggcaacg atagatacat gattggtcac ttctaaagaa
    36661 cgaatcactt ctgtgacatt ttcttcacct acaaatactt gttgtacttc gccaggttca
    36721 aaacgaataa ctgttttttg gagtaaagta gctatagctt tttcgtcttc atatgcgatg
    36781 ttatttttta aagcgatata ggttactgca cgatacatgg cacccgtatc aatatagaca
    36841 aagcgcaatt tttttgcaac gattttcgcc accgtgcttt tcccagccgc agccggtcca
    36901 tcaatcgcga tacatatctt tttagtcata aaataaaact ccttttatct gaaattggtt
    36961 tgattaattt cttcttgtga tgctaaaagt accattaatt tcatccgtgc ttttttgcta
    37021 tcgtaatctt ttcctaaaat aacgccacga ttatacaagt caaacgtgct accttcataa
    37081 tcatatgtag tatatacatt tccttcttcc gcacttgttg ttatgacaac tggaattccc
    37141 gcatctaatg ctctgataat agctggcatc atttttggcg ccacttgccc tcgtccaaca
    37201 ccttctaaaa cgattcctga tacgccacta tctatcgctg catcaataaa caaaccatct
    37261 gcaccaatat aacatttaat cacaaccact tctggtaaat caaggcgaat atcaaaacac
    37321 tcatgctcca gtggtttttg atacagaaaa acttggtcat tatcaataat acccagatag
    37381 ccaaacccaa aagcactaaa accttgtatg ttggatgcat gaactttttt tacatatctc
    37441 gctgcaaaaa ttcgttcatt gaaaacaacg actgtcccag cttgacgtaa atttatttca
    37501 cacgctgtat aaattgcatg acgaatatta acataggcat ctgtccctgg ctcctcaggt
    37561 gctcgctgag atccagttac tacgattggt cgcgcatcgg ttactgcaag atcaagaaaa
    37621 taggctgttt cttctaatga atctgttccg tgcgtcacta ctattccatc atatgtttca
    37681 tccatgaaga tagattcgat aagttgcttc agactgatta aatcaggtag cgtaatgtgc
    37741 atagatggta attggaaagt agaatagata tcaatttgaa tttctgttgg taattggcat
    37801 aatgcagcta attcttctcc agataattct cctgatgcaa gttttcctga tgctgttttc
    37861 ttacttgcaa ttgtaccgcc tgttgtaatt agtgctactt ttgccacggt tattcccccc
    37921 tacattttcc ttttaaacaa acaaatgagt ctcggaagcg tttcccagac ccattcagtg
    37981 ttgtttatta ctgtggaatt gttagaactg taccaactgg aacattgtca cttcctagtc
    38041 cattggcttg tttaattttt tctactccag cagctgcccc cgcttgtcca tatgttgaac
    38101 gtgcaatact ataaagggtg tccccagctt taacagtatg agatcctcca gctttttgct
    38161 gtgaggcttc attcgctttt tgctgctcag ctttttcagc agcagctttc tcggcagcag
    38221 ctttgtcagc cgcagctttt tcttcggcag cttcttgttc tttttttgca tttgcagctt
    38281 tcactgcatc ttcttcttgt tttttcttat ctgccgcagc tttttcttcg gcagcttttt
    38341 tctcttcagc tgccttttca gccgctgctt tttcttcggc agcttttttc gctttttctt
    38401 tttcttcttt agattgcgtg ttgtcagata catttacggt tgattctgtt tctgttttca
    38461 cttcatttga tgaacccata ttttgtactg ttacaaatac aatcacgata acgattggta
    38521 ttaatagaaa aaaaacaatc aataaattaa gtaatgggta tctaaaaatg gttttctttt
    38581 ttcctcttct gctatcagaa cgggataaca ttggcggttc attgttgaat tcatcttgac
    38641 cttcagaact catatcataa tcagccggtt cttcgtattc ccgtttttct tttcttgttt
    38701 ttaccactca aagttcctcc tttagtgctt tctaaactta tcctatgcac tattattggc
    38761 acagagaagt gttacatatg atgttaat
//
LOCUS       DASDYK010000010        38407 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.010, whole genome shotgun sequence.
ACCESSION   DASDYK010000010 DASDYK010000000
VERSION     DASDYK010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 38407)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38407)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38407
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.010"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            221..1057
                     /locus_tag="U0308_000596"
     CDS             221..1057
                     /locus_tag="U0308_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEM2315610.1"
                     /translation="MYKDFANFIRTNKADLLNNWMNEMEKQSDQLINDIAKEAMYEET
                     SKEFVDLIVSNVTENGSKFNEKLDDFAEKVVHLGWPIHFVTTGLRVFGLLVYTAMRDE
                     DLFLKREEKPEDDAYYRFETWLSSMYNKVVTAYADTWEKTVSIQKSALQELSAPLLPI
                     FEKISVMPLIGTIDTERAKLIIENLLIGVVKNRSEVVLIDITGVPVVDTMVAHHIIQA
                     SEAVRLVGCQAMLVGIRPEIAQTIVNLGIELDQIITTNTMKKGMERALALTNREIVEK
                     EG"
     gene            1063..1419
                     /locus_tag="U0308_000597"
     CDS             1063..1419
                     /locus_tag="U0308_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014096810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEM2315611.1"
                     /translation="MGIPILKLGECLLISIQSELDDHTAVEFQEDLLAKIHETSARGV
                     VIDITSIDFIDSFIAKILGDVVSMSKLMGAKVVVTGIQPAVAITLIELGITFSGVLSA
                     MDLESGLEKLKQELGE"
     gene            1422..1832
                     /locus_tag="U0308_000598"
     CDS             1422..1832
                     /locus_tag="U0308_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma regulatory factor"
                     /protein_id="HEM2315612.1"
                     /translation="MTFQSCVKIINEWDIVAARQLGRKISKEIGFGTVDQARITTAIS
                     ELARNIFLYAGRGEICIEKVNESGKQGMIIVAKDKGPGIVDIRKVMQDGYTTSGGLGA
                     GLPGVKRLMDSFDIESSIEGDSKGTVITTTKWVR"
     gene            1849..2853
                     /locus_tag="U0308_000599"
     CDS             1849..2853
                     /locus_tag="U0308_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HEM2315613.1"
                     /translation="MEKAFEGKYRDILIQYLEHQDEEILYTCEKLSREAMEERVSPEE
                     IVHLHRSVLELYGKELPDFVRLSFDVLLEIMVGYGLAYMEHLSLRTEQKELRSEIAQA
                     EDMQKTLMKTEVPEHDELDFGVISVAARQMSGDYYSFTEEGDKQIGIALADVIGKGIP
                     AAFSISMIKYALAGMTGDDRKPSIVLESLNQVAEENINDNMFITMFYGLYHEDTHLFE
                     YGSAGHELGLYYQHKENSFSDLYAKGLPLGVDKNAVYRQFDKKIEVGDAIFIMSDGVT
                     ETRTANGFLEREELTEIIAAHISLSAEKMVHAIYDQLVKMQNFELHDDFTLICIKRTK
                     "
     gene            3003..3347
                     /gene="rsbV"
                     /locus_tag="U0308_000600"
     CDS             3003..3347
                     /gene="rsbV"
                     /locus_tag="U0308_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti sigma b factor antagonist RsbV"
                     /protein_id="HEM2315614.1"
                     /translation="MNISIEIKERDTDHIDIFVAGEIDAYTAPKVKEALEVYQVKEGI
                     VLRIDLTEVSYMDSTGLGVFVGAFKSLRQRQSELVLFGLSDRLFRLFEITGLSDIIEI
                     KNVEGEMNGNNA"
     gene            3331..3804
                     /gene="rsbW"
                     /locus_tag="U0308_000601"
     CDS             3331..3804
                     /gene="rsbW"
                     /locus_tag="U0308_000601"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma B factor RsbW"
                     /protein_id="HEM2315615.1"
                     /translation="MATMHDKITLQLPAKPEYVSLGRLSLSGIASRAGFSYEAIEDLK
                     IAVSEAITNSVKHAFKGEDDGEITVEYLIYEDKLEVRVSDNGTSFDLETRKQEIGPYE
                     VGEDAEMMRIGGLGLFLIETLMDDVKLYYDEGVSVVMTKYINEKQVEENAKSIST"
     gene            3782..4561
                     /gene="sigB"
                     /locus_tag="U0308_000602"
     CDS             3782..4561
                     /gene="sigB"
                     /locus_tag="U0308_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigB"
                     /protein_id="HEM2315616.1"
                     /translation="MPKVSQPDKEAKEKVYIWIAAYQENGDQDAQYNLVVHYKNLVES
                     IARKYSQGKSFHEDLVQVGNIGLLGAIRRYDATFGKSFEAFAVPTIVGEIKRFLRDKT
                     WSVHVPRRIKELGPKIKNAVEELTRELQSSPQISDIADFIGVTEEEVLEAMEMGKSYQ
                     ALSVDHSIEADSDGSTITLLDVVGGTDDGFERVNQRMLLEKVLPVLDEREQKILQFTF
                     IENRSQKETGELLDISQMHVSRIQRQAIKKLREALQNEEVE"
     gene            4562..5161
                     /locus_tag="U0308_000603"
     CDS             4562..5161
                     /locus_tag="U0308_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HEM2315617.1"
                     /translation="MNKAVESNNLFVFQRSKALQQYCGDVYYTHEDENGFLYVLSDGL
                     GSGLEANRAAKATVDAIKEDIHADITDMLEKANQAVSGLRGAAIAIIKGDYLTKTLYY
                     TGMGNIRFYMIGMEDKLIFPLSGSGFLSGRKQKYRLQSFKYKPGSKFLMHSDGLVLSR
                     VRKSLESPLCVVKIGHLIERNILDIPTDDVTFMVGKFPE"
     gene            5366..6997
                     /locus_tag="U0308_000604"
     CDS             5366..6997
                     /locus_tag="U0308_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEM2315618.1"
                     /translation="MKKVWLNSVKDYTWARFRKDLLAGIIVGIIALPLAMSFAIASGV
                     SPEYGIYSSFVAGIIVSIFGGSKFQIAGPTGAFIPVLLGIVLTYGYQDLLVAGMMAGV
                     LLCLMGIFKIGTLIKFIPRPVTIGFTAGIAVTIFMGQVGNFLGLTGMEKHESFVANMN
                     EIWLHLDSWNFYSVFISCICMLVLFIFPKILPRIPAPLIGLVITTAIAMLFFPDALPT
                     IGSAYGDIPSTFPPFEFPDMTFANMSKLIGPAFVIAMLGGIESLLSAVVADGMTNTKH
                     NSNRELIGQGIANIVTPMFGGIPATGAIARTATNINNGATSRVSGVIHGIFVLLTLLV
                     LAPVAVNIPIAAMAPILMLVAWNMSERKTFQHIIKLKSGDTLVLIITFLLTVFASLTV
                     AVEVGLLLAVVLFAKQMGSSMQIEEIEPEGAEIAPHLHEKISIFTIRGPLFFGAAQIF
                     QQNIIKAIHVKPKYLILRMGKVPIIDATAEGYFHQIEKEFSKQGGQILITGLTDKAKE
                     SLKGSGLYDRIGEEHFFSHTEDAIHYAENALNKGD"
     gene            7068..9245
                     /locus_tag="U0308_000605"
     CDS             7068..9245
                     /locus_tag="U0308_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HEM2315619.1"
                     /translation="MEQMQDKIIKLVQKSLTYKPAQINAVIKLMEEGNTVPFIARYRK
                     EMTGSLDEVEIRDIEETFEYVTKLENRKEEIIRLIDEQGKLTDELRAAITKAEKHQAL
                     EDLYRPYKQKKRTKATIAKEKGLEPLADWLMSFPSNADPLKEAANYISEEKEVESAEA
                     ALLGAHEIIAEQISDEPSFREWIRNFTRKFGMIESRAKNAEVDEKGVYEMYYEFNEMI
                     GKVASHRILAFNRGEKEDILRVQVQVDTTKIFQYLFEKVIQNRNSATRPYVEEAIMDA
                     YKRFIGPAIEREIRGELTEKGEEQAIHIFSENLRKLLLQPPLKGKIILGVDPAFRTGC
                     KFSVLDQTGKVLEIGVVYPHTAKARRPEAKQKIAEILSTYKVEVIAIGNGTASRETEQ
                     FIVEVIRESKSNAYYCIVNEAGASVYSASETAREEFPDYQVEERSAVSIGRRLQDPLA
                     ELVKIDPKSVGVGQYQHDVAQKRLNETLTFVVETAVNQVGVNVNTASASLLQYVAGLN
                     KTVANNIRKYREENGSFASRKELKKVPRLGAKSYEQSIGFLRILEGENPLDKTAIHPE
                     SYKAAEQIVKAAGFGLKDIGSEDLKAALQALSIPEEAEKLSIGKETMRDIIDNLIAPG
                     RDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLS
                     NSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTMLNPNGSVK"
     gene            9245..9712
                     /locus_tag="U0308_000606"
     CDS             9245..9712
                     /locus_tag="U0308_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003746483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family protein"
                     /protein_id="HEM2315620.1"
                     /translation="MNQAELQRHMEEVSLQFFQKEFRHQAVFNARLRTTGGRYLLKSH
                     HIEMNPKYLENFGLAYFIGIMKHELCHYHLHLEKKGYQHRDQDFRELLKKVDAPRFCA
                     TIPREITMHEYTCKSCGKSFLRQRRFNVNRYRCGSCGGKLIQTGSKKIYTENA"
     gene            9765..9837
                     /locus_tag="U0308_000607"
     tRNA            9765..9837
                     /locus_tag="U0308_000607"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9798..9800,aa:Asn,seq:gtt)
     gene            9841..9928
                     /locus_tag="U0308_000608"
     tRNA            9841..9928
                     /locus_tag="U0308_000608"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9875..9877,aa:Ser,seq:gct)
     gene            10081..10521
                     /locus_tag="U0308_000609"
     CDS             10081..10521
                     /locus_tag="U0308_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADAR family protein"
                     /protein_id="HEM2315621.1"
                     /translation="MKVIHFYSENADYGCFSNFSLHPIVIDGVTYPTTEHYFQAQKFI
                     DKKIIKKVINTKKPIDAAKLGRNRDFPLRKGWESMKDEVMLKAIRAKVAQHSEVKEML
                     LTTENAILVEHTENDHYWGDGGDGSGKNRLGKILMKVRDEWNSK"
     gene            10537..11022
                     /locus_tag="U0308_000610"
     CDS             10537..11022
                     /locus_tag="U0308_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEM2315622.1"
                     /translation="MEPINHFFEWAKNNNWQVDLSAVEKNLPEQILKRYGKLPDAYKA
                     FYRQLNLCSNVGDTCWFLLEEDFLENEDDAFSWNSFEQMSLEAAEGDTNLENEVKLFW
                     NAHLPIMMSVGGCYEYYAITLNDGNIVHGSEPEFEESSIVADSFADFLLKIVAGEIVI
                     S"
     gene            11077..11469
                     /locus_tag="U0308_000611"
     CDS             11077..11469
                     /locus_tag="U0308_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chaperone"
                     /protein_id="HEM2315623.1"
                     /translation="MDNKLEFTTIDEYITQAPPETKEVLQKIRETIKAAAPEATEKIS
                     YQMPTFYLEGNLVHFAVAKNHYGFYPASSGIAAFESKLGNYKHSKGAVQFPIKEEVPY
                     ELIKEMTLFRLAENKQKAAEKLAKKKKK"
     gene            11614..12900
                     /gene="celB"
                     /locus_tag="U0308_000612"
     CDS             11614..12900
                     /gene="celB"
                     /locus_tag="U0308_000612"
                     /EC_number="2.7.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose transporter subunit IIC"
                     /protein_id="HEM2315624.1"
                     /translation="MNKFMELLGEKLMPLAAKLGENRYLTTLRDAFMLAFPLTMFGSI
                     AVVLMNLPFWSDETKAVLQLYLGNAQSATMSIMTVFVVFGIGYSLSKYYKVEAIYGGA
                     VALASFLILTPFFFNSPDGELITGALSLDRLGAKGMFIGMITGFIAAELYRFFVQRDW
                     TIKMPAGVPPAVAKSFAALIPAILTLSIFLAINVMVQFFFHTNLHDVVYTVIQKPLVG
                     LGSGIVPTLIALFFVQVLWFFGLHGQIIVNSVMDPIWNTLMLENLDAYKAGLPLPHII
                     TKPFMEVFTVGMGGSGMTLAVVIALAFLMKSKQSKEIGRLALGPGIFNVNEPVLFGMP
                     IVLNATILIPWIIAPLIVTTLNYFVMAAGIVPAPTGVAVPWTVPIVINGILATNSWLG
                     GALQVVDFFIVLIIWYPFLKLVDRTNIARESEAAIK"
     gene            12981..13694
                     /locus_tag="U0308_000613"
     CDS             12981..13694
                     /locus_tag="U0308_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2315625.1"
                     /translation="MVKYELIAADIREKINNGTYPPESILPDQVSLCKAYDCSRMTIK
                     KAFDVLALEGLVYRQRGAGTFVMKNALANKQDASLRDYDGLTKMMGDNRISSKIIAFD
                     IAFPDEKTQEQLLIKADQPVYKLIRLRLLDGAPYVLEHTTMPADLVPGLTKEILHHSI
                     YAYLQDSLGLVLSGAFRKINADKPSEYDQEYLACGEHDPVLEVEQVVYLKDGRPVEYS
                     RSRHRYDTRSFIMVDHREK"
     gene            13892..13963
                     /locus_tag="U0308_000614"
     tRNA            13892..13963
                     /locus_tag="U0308_000614"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:13925..13927,aa:Glu,seq:ttc)
     gene            13990..14062
                     /locus_tag="U0308_000615"
     tRNA            13990..14062
                     /locus_tag="U0308_000615"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14023..14025,aa:Asp,seq:gtc)
     gene            14190..14570
                     /locus_tag="U0308_000616"
     CDS             14190..14570
                     /locus_tag="U0308_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEM2315626.1"
                     /translation="MDLVKNGKVLELVHPNGNWTLIKEEGFSPVQITVAAVAACSGYV
                     YQTLLEKKRIEINDLSIHTDYEQDQESAVHVLTKINVTFTVDLVDKSNEAKAEKAVHL
                     VKDACPVAKSLDPSIEINEMVVFK"
     gene            14685..15359
                     /locus_tag="U0308_000617"
     CDS             14685..15359
                     /locus_tag="U0308_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HEM2315627.1"
                     /translation="MAEKTIVEKLQLTKYKEAVILNQPNGADCFQNLANYEEKLADKQ
                     YDLIFDFVETLEELITFVQKVIAENKLAANGYLFFAYPKKGNKKFATYVHRDELMPAL
                     KTDEEGYVDGSTLKFTRMVALDETYTVVGLKEAAKLKAKGVKKNNPSADEYADHVPLV
                     AEFLADKGDLQAFYNNLATGYQRVWARYIYSAKQPATQEKRRLEMVDILSQGYKTKDL
                     YRQGKK"
     gene            15490..15987
                     /locus_tag="U0308_000618"
     CDS             15490..15987
                     /locus_tag="U0308_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine phosphatase family protein"
                     /protein_id="HEM2315628.1"
                     /translation="MANYINKERRQIDFDPFDLRIIAVPEVVAVQFKPRSEHTLLIRI
                     ADVGATYQPLKNESLFEAILPVHFNDINEEDDYWGLSDKEQAEMKLFNEVHRDLIYNF
                     VDEHPDFTQIVVHCHAGVSRSSAVAMAIAEHLRDTDTYEKLQVIKRYLPNPRVLAIMR
                     GEAYL"
     gene            16023..17372
                     /gene="gorA"
                     /locus_tag="U0308_000619"
     CDS             16023..17372
                     /gene="gorA"
                     /locus_tag="U0308_000619"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HEM2315629.1"
                     /translation="MEKHYDYIAIGGGSGGIASINRAAMHGAKCALIEPKFLGGTCVN
                     VGCVPKKVMWYGAQIKEAMDLYADAYGYQVDASFNFQKLVENREAYIERIRGSYKNGL
                     DNNKVEWIKGYAEFVDEKTLRVNGELVTADHILIATGGEPALPSIPGAEFGITSDGFF
                     ALKELPKKVAVVGAGYIAVELAGVLQQLGSETHLFVRKHAPLRNFDPLLTDTLTEIIE
                     QSDMTLHKHAVPQKVEKNPDGSLTLSLEDGRTETVDTLIWAIGRKPVIQGLQIEKAGV
                     KLLESGHIAVDKFQNTNVAGIYAVGDVTGHYELTPVAIAAGRRLSERLFNNKKDAHLN
                     YENIPTVVFSHPAIGTVGLTEPEAIEKYGKENIKVYTSSFTSMYTAITDHREPCRMKL
                     ICEGKTERVIGLHGIGYGVDEMIQGFAVAINMGATKADFDNTVAIHPTGSEEFVTMK"
     gene            17401..18075
                     /locus_tag="U0308_000620"
     CDS             17401..18075
                     /locus_tag="U0308_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM2315630.1"
                     /translation="MGKKLSLYFVRHGQTYLNKNLRMQGWADTPLTPEGIEIVKESGR
                     GLAETEFVAAYSSDLHRTIATAGHLLKENKHAFGLTLEPLSEFRETFFGSYEGEKGDV
                     AWNEIAHHMGYANQEDLFKNADVRETMNGTKAADPTGDAEDFMTFWTRVEQGFLHVIN
                     RHRETGGNVLIVAHGNTIRNIVHELEPSMDEAVILDNASVTVLAYENGLFKLERLNDT
                     SHFKKA"
     gene            complement(18118..19254)
                     /locus_tag="U0308_000621"
     CDS             complement(18118..19254)
                     /locus_tag="U0308_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM2315631.1"
                     /translation="MKFSRFRDSKLFFWTIEILAVVAILFVLLQMKYIFSPIGIIVST
                     LFMPILVAGFLFYLFNPLVLFLEKRKVPRLLSVILIFIAFITLVVLAVMQLGPTLADQ
                     VAELAKAIPGYWQDFEKWLQDLSNNSALKDLDIKQELEKLNISLPKIMSVVVDGVASS
                     FGAIVSFVSSFVMILVTVPFIVFYMFKDGHKFVESSGRFFPAGIRSEAKQIIKEMNKT
                     ISTYISSQAIDCMFVGLFTFIGYLIIGQPYALLFGFIAGATNIIPYLGPFIGAAPAVI
                     VALFTSPVQALLVIVVVTIVQQIDSNLLSPYIMGKSLSIHPLTIIIILIVAGNLAGIF
                     GMILGVPLYAVVKTIIVNVNRLIKLRRGQLAIDNNLPDPDTPKE"
     gene            19395..19787
                     /locus_tag="U0308_000622"
     CDS             19395..19787
                     /locus_tag="U0308_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2315632.1"
                     /translation="MLLAIDLQSDEPIYTQICNQIIEGMAKRELLPGDKLPSVRSLGA
                     DIGINFHTVNKAYQILKQEGFIQIHRQKGVVIHPDGVAKADELFFAKLQTKLKPLIAE
                     SVVRGVTEEKWLEVSKAIFDEMHGRRVE"
     gene            19790..20893
                     /locus_tag="U0308_000623"
     CDS             19790..20893
                     /locus_tag="U0308_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1648 domain-containing protein"
                     /protein_id="HEM2315633.1"
                     /translation="MEIIIYIFVSIAIISLQAITPFVIRKSECFGVNVGERANRNAEL
                     TRLKKQYVGQVVLWTSFVAIIGIALIQGFHSSENMQAGIFIASMFGQLIVSFIIYYRF
                     HHTTLQWKRDKIEAGEISTNSIIMVDTSFHRRKMVISYTWFVVPLLIFIITLAITVVF
                     YPVAPADFPIHFDMSGAVTDTVAKSPRVVLLLPMMQLGMIALFIFINFVIARSKQSVE
                     NENPTDSLKRGLLFRQISSKAMLIMCTIMVIDFLIMQVVTLLALPAEWMMITMIISVV
                     LILFGTVLLAVKVGQGGSRLKFADQPDGVNKPIRDDDSFWKAGVIYFNRNDPALFVEK
                     RFGIGWTINTARPVAWLSFIIIIAVIILISILF"
     gene            20976..21479
                     /locus_tag="U0308_000624"
     CDS             20976..21479
                     /locus_tag="U0308_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="effector binding domain-containing protein"
                     /protein_id="HEM2315634.1"
                     /translation="MAIRLKRLEEWEGFTGIALVREGLKTEALHTEIKTAFKEMLQLA
                     RELDDFSKQKTFYGISVHNIEDGITHYSVIPVEQKYPHLQEPLEWIEVPAHTYFVAEH
                     IQDTDISESYEEIARAIQEKNYKPYITANNPVFDPLPFKLEVYTKQGSDGANIEIRIP
                     VVKELHT"
     gene            21593..22405
                     /locus_tag="U0308_000625"
     CDS             21593..22405
                     /locus_tag="U0308_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HEM2315635.1"
                     /translation="MGYYSPQEVTEITIEKGTQKANSSTLTLVLLGFLGGAFISLGYL
                     LYIRAVGTMPHEWGSFATLIGASLFPVGLVCILLGGGELITGNMMAVAIAWYDKKISF
                     QQLLRNWAIVSVMNLVGAFFVAYFFGHFVGLTEGDFLPKTLATAGAKINDPFWVAFVS
                     GIGCNWFVGIAVWLCYAAKDFAGKILGIWFPVMAFVAIGFQHVVANMFIIPAAIFAGY
                     YSWADFIWNIIPVYLGNVVGGAVFVSLFYFIAYKKNAPKKVKEEIHQPIEES"
     gene            22630..24096
                     /locus_tag="U0308_000626"
     CDS             22630..24096
                     /locus_tag="U0308_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEM2315636.1"
                     /translation="MSIKETALPKVQTKLFINGKWTDGDNKETKDIVNPANGEVIAKI
                     AQAGPNETKKAIKAAKEAFPDWAKMELADRVKLLHKIADLMEEKADTLAKIMTLEQGK
                     PLKESKGEVLTGAENFRFAAEEARRLYGETIPAPNNHAFIVKKQPIGVVAAITPWNFP
                     GGMVTRKLAPALATGNTIVLKPSGDTPLSALAIFEIFEEAGLPKGVANIVMGSSKEIG
                     ETLTDSDDVRKLTFTGSTKVGQTLFKQSAETLKKISLELGGHAPFIVFDDANLDAAVN
                     DLVAAKFRNNGQVCVSPNRIFVAKEIKEKFTKALVAKVKQLKVGNGLDDVNVGPLIRE
                     DAIDKIDKQLKNATDKGAKVLTGGGRLTGSDYDKGNFYKPTVLDNVTREMDIFYEETF
                     GPVIPLITFETEDEAIEMANDSEFGLASYFYTKDLARVEKVGAALEYGMVGANEIVIS
                     NPETPFGGVKHSGFGRENGHYGMEEYIQVKFINLKYRD"
     gene            24240..24545
                     /locus_tag="U0308_000627"
     CDS             24240..24545
                     /locus_tag="U0308_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2315637.1"
                     /translation="MKNILLICGSGASSGFMAAAIRKAAKKRGEQVTVKAASESQIDE
                     RINEIDYLLIGPHLAYMLDDLKQKVADKNVLVSIIPQATYGTLNGEKALDLILTMEG"
     gene            24550..25818
                     /locus_tag="U0308_000628"
     CDS             24550..25818
                     /locus_tag="U0308_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2315638.1"
                     /translation="MNNKVMDFMTNKFAPKVNKVVKNPWVSAIQDAIMSALPLVFVGS
                     LVTIVSLLKNLFPGMPDFSMISNFSFGMFGLVVAFLIPYYLMEKKGNSSQKLISGATG
                     LVLFLMLLFPTISADGDAVFILSRFGATGMFLSITTGLFVGCVMNFAAKRSFFSEDTP
                     IPDFVVGWFNSLLPITFILIVGWLITVQFNIDFFEVIVAVFSPLASIVQSYPGFVLSV
                     FIPAFLYTFGISGWVMMPAIYPVYMAGLAENSQAVANGASASNIATQETVYALISIGG
                     VGTTLSLSIMMLILSKSLQLKAIGKAVIVPSIFNINEPLFFGAPIAFNPYLMIPTWIN
                     AFLVPSIAYFVMSMNLVSIPAQSFLLWYMPYPVTSYLATQDFRGVIACLAIIVITWLV
                     YLPFFKAYDNSLLKQEKLDAIETEKEMVTN"
     gene            25833..26183
                     /locus_tag="U0308_000629"
     CDS             25833..26183
                     /locus_tag="U0308_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2315639.1"
                     /translation="MSEQDYVEETDSLNELSMNILIHAGNARNYLVKGLNHLEELAFN
                     EAEEFIASAKKEIVIAHSLQTDTLQLEASGNQIRYSTLFCHAQDTLMTAKSEILIGEH
                     MLRLFKKMTELTKK"
     gene            26195..27646
                     /locus_tag="U0308_000630"
     CDS             26195..27646
                     /locus_tag="U0308_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2315640.1"
                     /translation="MFENYQFPKDFLWGGAIAANQAEGAFKVDGKGISLADLHKYHKG
                     KTNDEISEEQHKGVSLADIKASMEDKVNYYPKRHGIDFYHTYPEDLALLAEMGFKTFR
                     TSLDWTRIFPTGEETEPNEAGLKYYDQLIDKIIELGMEPIITILHYETPVEIVLNHGG
                     WHNRKVIDLFEKYGKTVLDRYNKKVKYWIIINQINLIQFEPFNSTAIPYDAVDDYLSA
                     TYQAVHNQFVASAKIYEYGKALNPDLMIGTMLADCTAYPFSCDPDDIVLAMKRNRMEY
                     FFADVQFQGEYPQYALNYFDENNIHIEITEDDKAILQKNTMDYLALSYYYSQMVDSKK
                     NDLDPASITPNPHLKANPWGWAVDPKGLYNALSQYWDRYHKPIIIAENGFGMYDKLEN
                     GEIHDDYRIDYLSAHLKEMKRAMYDGVEIIAYCAWGPIDIVSCSSAQMEKRYGFIYVD
                     LDNEGNGTGKRIKKDSFSWYKKVIESNGEDLEA"
     gene            27719..29617
                     /locus_tag="U0308_000631"
     CDS             27719..29617
                     /locus_tag="U0308_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2315641.1"
                     /translation="MDTQKEILAYLHKQENKWVTSNELAAFCECTTRTIRNNISKINE
                     ATPNLIRSAKQGYQINQRIPFELQTESDVTERKSKLLLELIKNSTKGVDLFELADILY
                     ISEVTLKKDIQQLKNELKEADVQIVTSKDRIKLIGKERAKRKYMISLLYEEGGYRESI
                     KSRIQEMIEFVSIDKLQNIVKEVLTEESITTNQYSMMNIVLHYAISIVRIQQGNTLIE
                     TQKTLIRKHSKEYEISKKIAKILSEEYQIHFSEAETKQLGLLYVGLQNEQSANANHGE
                     LDQFVDKKIIEALKSVLANVEETYLIDLQNEQLFIKLAIHVQSLYYRSRYKAYTRNLS
                     LLDIKTSYPVTFDIAVYISSLLQEKLAIDFNEDEISFIALHIGSFLESENRDYIRLEI
                     GLLIEDYHDLRTNMLKKLRARFENEATIKLIENEDSEENFDIILTTNRDIALEKAGSI
                     FIHPLLTTKDIKKISNRIQTKKKILENHLRGQQIDRYIVRSLYANQIDPSELTPAKIR
                     EQMISKMEKQTFVTPEFKEKVEKRERMAPTSFPSGIAIPHSIKNDALQSGVSIMTLQE
                     PIYWNDVKIKIIALVAISKKDATEFNDFFEKFVEIVSEPINTKRLSMAESFEEFIQKL
                     KMMMEESE"
     gene            29910..31481
                     /gene="abc-f"
                     /locus_tag="U0308_000632"
     CDS             29910..31481
                     /gene="abc-f"
                     /locus_tag="U0308_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein"
                     /protein_id="HEM2315642.1"
                     /translation="MSTIEINQLKIEVADRVLVEIPHLLVSKKARIGIIGQNGLGKTT
                     LMEVIAGAKEATSGTVTTQGKLAYIKQLSTDTSTKSGGEKTRKAIQHAMRQNPSVLLA
                     DEPTSNLDVESVKHLERQWSDFHGALIIISHDRTFLDALCTEIWEIKNQKIHVYKGNY
                     HAYLEQKQQQENQAELVYKEFKNKKQQLQASQTHHEIEAGRIVKPGKRLNNKEASAFK
                     AGKGTQQKKQHSTIKALEKRIERLGNVEKPHTTKPIKMITPDNRVIKKGNTILSVKET
                     TYEIAGRKLFETKAFSIKAGDKVALIGENASGKTTFLKEIIQENPNLLCNPQAKIAYF
                     DQELNGLNQTKSLLENISEISVQTKQVNREVLGSMHFKESDLHKEVRMLSGGERVKLL
                     LSMLLVSDANFLILDEPTNYLDIYAMEALETLIKQFAGTVLFVSHDRTFVNHVAEQLL
                     VIENNEMTFHRMTFAEYEESKAPSRITEEDKLILEMRMSEIAAKLMQPNLKPTEKAML
                     EQDYQEIITKRQQFS"
     gene            31603..32643
                     /locus_tag="U0308_000633"
     CDS             31603..32643
                     /locus_tag="U0308_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEM2315643.1"
                     /translation="MFSHLPDSFLQMNTIFISILIEALPFVLIGVFIAGFIQMFISEQ
                     FIARVIPKNKFLAVIVGSLIGVFFPSCECGIVPIVRNLLAKGVPLHAGIAFMLTAPII
                     NPVVLFSTYVAFGSTWEVPLLRVAGSLVVALVVGNIIAYFYKGTGLKERFLKYEAASE
                     KVAVPATNLALAGGPSESTTTNFQVLTSDGALTEDAHKGHAHHHHGEEHAHTKMTLSQ
                     KIWHTVQHAVDEFFSVGKYLVFGALIAAAMQTYIKTSTLVSIGHGPILSILLMMVLAF
                     VLSLCSEADAFIGASFRSVFSTQSIVAFLVFGPMLDIKNLMMMLGAFKAKFVLLIVTS
                     VTIVVFLYALVI"
     gene            32662..33501
                     /locus_tag="U0308_000634"
     CDS             32662..33501
                     /locus_tag="U0308_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03943 family protein"
                     /protein_id="HEM2315644.1"
                     /translation="MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFL
                     LAIIQLIMVFRDEDIGAKTEHMGHTHDGENTILKKIMVYGLLSYALIAGFLFPVATLD
                     STIVSAKGFHFPKNNAAGDDPYAQNQFLRPDTSGYFGETDYEKMMAKEKAEIIDQNPI
                     KVNDSNYLMTMEILYNYPGEFTGKQIEFTGFVYNDEVTQDNNLFLFRFGIIHCVADSG
                     VFGMLVQMPEKTDLKNDTWLTVKGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVY
                     RKY"
     gene            33590..34510
                     /locus_tag="U0308_000635"
     CDS             33590..34510
                     /locus_tag="U0308_000635"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HEM2315645.1"
                     /translation="MNDYNHYFHFPREEWRKLEVSKDQILTAEELEEIRGLNDRISLQ
                     DISEIYLPLIKLIAIQYHEAIFIHGEKMEYLKKKESRAPFIIALAGSVAVGKSTTARV
                     FKLMLDRWFSKTRQVELVTTDGFLYPNKVLEERGIMDKKGFPESYDRDRFAKFLTDLK
                     ANKEDVEIPLYSHFTYDVLDETRVIHNPDIVIIEGINVLQADQHESLFPSDFFDFSVY
                     MDANEADIKKWYLERFFMLRETAFQDESSYFHPYTKISKQEAETFALGVWDTINGVNL
                     KENIEKTKYRADLVLQKGTDHLISDIYLRK"
     gene            34626..35348
                     /locus_tag="U0308_000636"
     CDS             34626..35348
                     /locus_tag="U0308_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012951409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2315646.1"
                     /translation="MSEIAIKVSNLDVKIGKKQILTNMTLEIEKGEIFGLIGPSGAGK
                     TTLVKTIIGMEKATNGTTEVLGKAMPNLPVISKIGYMAQSDALYTDLTAKENLDFFAS
                     LYSIKGAAKKDRMNYAATLVNLQQDLTKKVNNYSGGMKRRLSLAISVLADPDVLILDE
                     PTVGIDPELRKTIWAELGDLKANGKCILVTTHVMDEAEKCDRLAMIRNGQIIAVGTPQ
                     ELSSKTSSGKLEDAFLEFGGKH"
     gene            35348..36463
                     /locus_tag="U0308_000637"
     CDS             35348..36463
                     /locus_tag="U0308_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2315647.1"
                     /translation="MRIFAIVKRIINQFRRDKRTLALMFLAPLLLITLLTYLFEGDTV
                     KPVVGVSGLSDSMVKELKANDLTIKTYSENTDVTAKIKDANLDAFFKQNGEKLEVTYE
                     NSEPSLSKEIGLKLQKAMMTEQQAQVKKQAKATGESLAKAGIDPNTIPSLTQSPEKLS
                     ISTNYVYGDKGTTFFDTISPIFIGFFVFFFVFLIAGISFLRERTTGTLERLMATPIKR
                     IELELGYLIGFGIFALLQSILVAVFSIQVLGMMQNGSLFYVLLITLTLGMVSLALGIL
                     LSTFANNEFQIVQFIPIVIVPQVLFCGIFPLDGMADWLVWIAHIMPLYYGANALTSIM
                     VKGEGFASFATDFYILLGFVLVFVILNIFALKKYRKV"
     gene            36486..37142
                     /locus_tag="U0308_000638"
     CDS             36486..37142
                     /locus_tag="U0308_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2315648.1"
                     /translation="MDAEGDIIRQMLDLTEKETKMSEKQRRIVAASIELFAEKGYAGT
                     STNEIAKKAGVAEGTIFRHYKTKKDLLMAITMPTLIGGVIPFLAQSFVKEVFESEYPD
                     FQSFIREIIVNRFDFAKENGKVIKIYFMELFYHDELRIQFSEIFMTHVKGQFDQMIDY
                     YKERGEIVDMPNSTIMRALITNIVGFMLTRFVVMPDVEWDDAKEIDDTVAYIMRGLGK
                     "
     gene            complement(37174..>38407)
                     /gene="ltaS"
                     /locus_tag="U0308_000639"
     CDS             complement(37174..>38407)
                     /gene="ltaS"
                     /locus_tag="U0308_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipoteichoic acid synthase LtaS"
                     /protein_id="HEM2315649.1"
                     /translation="PNPEYFGKAKGKNVIYIHLESFQQFLVNYKLNGEEVTPFINSFF
                     KDQNTLSFTNFFHQTGQGKTADSEMLLENSLYGLPQGSAFTTKGQNTYESASAILGQQ
                     GYTSAVFHGNYKSFWNRDEIYKQFGYDNFFDASYYDMNEADVSNYGLKDKPFFKESEE
                     YLSSLQQPFYTKFITLTNHFPYPIDEKDASIAPATTGDSSVDTYFQTARYLDESVKSF
                     VDYLKKSGLYDNSVIIMYGDHYGISDNHEEAMTKILGKDYNTFENAQAQRVPLMIHVP
                     GVQGGVQEQYGGQVDLLPTLLHLLGVDNKEYLQFGTDLLSKDHKQLVPFRNGDYITPT
                     YSMIGGNMYNQQTGEPIATETKEMKETKEKVAKELELSDSVLQGDLLRFYAPDGFKKV
                     DPSKYNYNKKKSTDSSDK"
BASE COUNT        12799 a         6714 c         7956 g        10938 t
ORIGIN      
        1 atgcaggaca aaagggtctg acgtaaaata ataagtttaa tacataatga aataattaac
       61 tgctctgaag aaacagtaag gacatcagaa acctacaaac aacgcgtatc aacatactcg
      121 ctaaatttgt ttctaatgtc ttttttaaaa ggcagttaag caaaccgcac aataagagag
      181 aaaattttgt taatagtgga gaaaggttgg aaaataactg atgtataaag attttgcaaa
      241 cttcatccgt acaaataaag cagacttact aaacaactgg atgaatgaaa tggaaaaaca
      301 atcagatcag ctaatcaacg acattgcaaa agaagcaatg tacgaagaaa ctagcaaaga
      361 atttgtggat ttaattgttt cgaatgtaac tgaaaacggc tctaaattca acgaaaaact
      421 agatgatttt gcagagaaag tggtccacct aggttggccg attcattttg ttaccactgg
      481 cctacgtgtt tttgggcttt tagtatatac agcaatgaga gatgaagatt tatttttaaa
      541 gagagaagaa aaacctgaag atgatgccta ttatcgcttt gaaacatggc tttcctccat
      601 gtataacaaa gtggtcacag cctacgcgga tacgtgggaa aagacagttt ctatccaaaa
      661 aagtgcacta caggaattat cggcaccact tttgccaata tttgaaaaaa tttctgtaat
      721 gccgttaatt gggacgattg acacggaaag agccaagtta atcatagaaa atttattaat
      781 aggtgttgta aaaaatcggt cagaagtggt tttgattgat attacgggag ttcctgttgt
      841 tgatacaatg gttgcgcacc atattattca agcgtccgaa gcggttagac ttgtcggctg
      901 tcaggcgatg cttgtaggta ttagaccaga aatcgcgcaa acaatcgtta acttaggaat
      961 tgaattagat caaattatca cgaccaacac aatgaaaaaa ggcatggagc gtgcgctagc
     1021 cttgacgaac agagagatag tagaaaaaga ggggtgaata ctgtggggat accaatctta
     1081 aagttaggtg aatgtttatt aatttctatc cagagtgaat tagatgatca tactgcggta
     1141 gaattccagg aagatttgct tgcaaaaatc catgaaacgt cggccagagg agtagtcatt
     1201 gatataactt ccatcgattt tattgattca tttattgcaa aaattcttgg agatgtagta
     1261 agtatgtcta aactaatggg tgcaaaagtg gttgtaactg ggatacagcc agcagttgcg
     1321 attacactaa ttgaactcgg aattacgttt agcggagtac tttcggcgat ggaccttgaa
     1381 agtggtctgg aaaaacttaa acaggaattg ggggaatgaa catgacattc caatcctgtg
     1441 taaagataat taatgaatgg gacattgtag ctgctaggca actaggtaga aaaatatcta
     1501 aagaaattgg ctttggaacc gttgaccaag caagaattac aactgccatc agtgaattag
     1561 ctagaaatat tttcctttat gctggacgag gagaaatctg tatcgaaaaa gtaaatgaat
     1621 ctggtaaaca agggatgatt attgttgcca aagacaaagg tccaggtatt gtagacataa
     1681 gaaaagtaat gcaagatggt tatacaacat cgggcggact tggagcaggg cttccaggag
     1741 tcaaacgttt aatggacagt tttgatattg aatccagtat tgaaggcgat tctaaaggaa
     1801 cggtaattac aacaacgaaa tgggttcggt aaggagagct agaaaaaaat ggaaaaagct
     1861 tttgagggaa aataccgtga tattcttatt cagtatttag aacatcaaga tgaagaaatt
     1921 ctttatactt gcgaaaaatt atccagagaa gctatggaag agcgagtatc accagaagaa
     1981 attgtccatt tacatcgctc ggttcttgaa ctatacggaa aagagttgcc ggattttgta
     2041 cgattatcat ttgatgtact actagaaata atggtaggct acggcttagc ttatatggag
     2101 catcttagtc taagaaccga gcaaaaagaa ttacgtagtg aaatcgctca agcagaagat
     2161 atgcaaaaaa cgttaatgaa aacagaggta ccggaacacg atgaacttga ttttggagtt
     2221 attagcgtcg cagctagaca aatgagcggt gactactata gctttacaga agaaggtgac
     2281 aaacaaattg gtatcgcgct tgctgatgtt attggtaaag gaattccagc cgcatttagt
     2341 atttccatga taaaatacgc actagctgga atgactgggg acgacagaaa accatctatc
     2401 gtactcgaat cattaaacca agtagcagaa gaaaatatta acgacaatat gtttatcacg
     2461 atgttttacg ggctttatca cgaagataca catttgtttg aatatggttc agccggacat
     2521 gaactgggct tatattacca acataaagaa aacagctttt ctgatttata cgccaaaggt
     2581 ttaccactgg gtgtagataa aaatgctgtc taccgtcaat ttgataagaa aattgaagtg
     2641 ggggacgcta tatttattat gtcagatggt gtaacagaaa caagaacagc caatggtttt
     2701 cttgaacgtg aagagttaac agaaattata gcagcgcata tttcattatc tgctgaaaaa
     2761 atggttcatg cgatttatga tcaattagtt aaaatgcaaa actttgagtt gcatgatgac
     2821 tttacgctta tttgtattaa gcgaactaaa taagaagaag tgaagacgta cctcattctt
     2881 tagagagcat ttactggtga gtaaacgtat ttaaagagtg gagcgttttt atttttgaat
     2941 gttttaattt tattagttag ggtaaaatcg acagtatact taaaattaga tggggtgaag
     3001 tgatgaatat tagtatagaa ataaaagaac gtgatactga ccacatagac atatttgttg
     3061 ctggggagat cgatgcttat acagcgccaa aggtaaaaga agcacttgaa gtatatcaag
     3121 taaaagaggg tatagtactt cgaatcgatt taacagaagt aagttatatg gatagtaccg
     3181 gattaggcgt atttgtagga gcgtttaaaa gcttacgtca acgccaaagt gaacttgtct
     3241 tgtttggttt aagcgaccga cttttccgat tgtttgaaat cacaggattg tcagatatca
     3301 ttgaaatcaa aaatgtagag ggtgaaatga atggcaacaa tgcatgacaa aattacatta
     3361 caacttcctg ccaagcctga atatgttagt ttaggtagac tttcattatc aggaattgca
     3421 agtcgcgcag gattttctta tgaagcaatt gaagatttga aaatagccgt aagtgaagcc
     3481 atcactaatt ctgtaaagca cgcatttaaa ggagaagatg atggtgagat tacagtagaa
     3541 tatcttattt atgaagacaa attagaagtt cgtgtttctg ataatggaac aagcttcgac
     3601 ttagaaaccc gtaaacaaga aattggccca tatgaggtag gggaagatgc ggagatgatg
     3661 cgtatcggag gtctaggttt atttttaatt gaaacattaa tggatgacgt gaaactttat
     3721 tatgatgaag gggtttctgt cgtaatgacc aaatatatta atgaaaagca ggtggaggag
     3781 aatgccaaaa gtatctcaac ctgataaaga ggcgaaagaa aaagtctata tatggattgc
     3841 cgcttaccaa gaaaatggcg atcaagacgc ccaatataat ttagttgttc attacaaaaa
     3901 cctagtagag tctattgctc gcaaatattc ccaaggtaaa tcttttcatg aagatttagt
     3961 tcaagttgga aatattggct tacttggagc tattagaaga tatgatgcga cgtttgggaa
     4021 aagctttgaa gcatttgctg taccaaccat tgttggcgaa attaaacgat ttttacgtga
     4081 taaaacatgg agtgtgcatg tgccgcgccg aatcaaagaa ttaggtccga aaattaaaaa
     4141 tgccgtagaa gagctgacga gagaactaca aagctcgccg caaattagcg acattgctga
     4201 tttcatcggt gtcacggagg aagaagtttt agaagcaatg gaaatgggaa aaagctacca
     4261 agcgctttct gtagatcatt cgattgaagc tgattcggat ggaagtacaa ttaccttatt
     4321 agatgttgtt ggtggtacgg atgatggatt tgaacgtgtg aatcaacgta tgctcttaga
     4381 gaaagttctc cctgttttag atgagcgaga acagaagatt ttgcaattta catttattga
     4441 aaatcgcagt caaaaagaaa cgggtgaact actcgatata tcacaaatgc atgtgtctag
     4501 aatccaacgt caagctatta aaaaacttcg agaggcgttg cagaatgagg aagtggagta
     4561 aatgaacaag gcagttgaat caaataattt atttgtattt caacgttcta aagcattaca
     4621 acaatactgc ggggatgttt attataccca tgaagacgaa aatggttttc tgtatgttct
     4681 ttctgatgga cttggaagcg ggctcgaagc taatagagct gccaaagcga ccgttgatgc
     4741 cataaaagag gatatccatg cagatattac cgatatgctc gaaaaagcga accaggctgt
     4801 ttcaggactt cgaggtgctg cgatagctat tattaaaggt gactacttaa cgaagaccct
     4861 ttattatact ggtatgggta atattcgttt ttatatgatt gggatggaag ataagcttat
     4921 ttttccgctt tctggctctg gatttttgtc cggtcgaaaa cagaaatatc ggttgcaatc
     4981 gtttaaatat aaaccaggca gtaagttttt aatgcattca gatggacttg ttctttctcg
     5041 cgttagaaaa agcctagaat cgccactttg tgtagtgaaa atcgggcatt taatcgagcg
     5101 taatatatta gatattccaa cagatgatgt tacttttatg gttgggaaat ttccggaata
     5161 acaaaaacac cttttaaatg attcctagtt taaaaggtgt tttttcttaa tggacatgag
     5221 aacttagtct atttatggta tattagaata gagcgctagt tttttatact tcatcatgtg
     5281 ataaatatca cttaataagc gtgaagcaat cttgctttgc gttttttcgc gcggattaaa
     5341 atataaataa gagagaagga gcaaattgaa gaaagtttgg ttgaatagtg taaaagatta
     5401 tacgtgggcg agatttagga aagacttgct tgcgggaatt atcgtgggca ttatagcttt
     5461 accactagcg atgtccttcg cgattgcatc aggtgtaagt ccagaatatg ggatttattc
     5521 gagttttgta gcgggaataa tcgtttctat tttcgggggc tcgaagtttc aaattgctgg
     5581 tccaactggt gcttttattc cagttttact aggaatcgta ttaacttatg ggtaccaaga
     5641 tttactcgtt gctggaatga tggcaggggt cttactttgc ttaatgggga tttttaaaat
     5701 tgggacttta attaaattta tcccgcgtcc tgtaactatc ggatttacag ccgggattgc
     5761 tgtcacgatt tttatggggc aagtggggaa cttcctcggt ttaacaggta tggaaaaaca
     5821 tgaatcattt gtcgcgaata tgaatgagat ctggttacat ttagattcat ggaatttcta
     5881 tagtgtgttc atttcctgta tttgtatgct tgtcttattt atttttccta aaattttacc
     5941 gagaattcca gcaccactta ttggacttgt gattacgacg gcgattgcga tgctattttt
     6001 cccggatgcg cttccgacga ttgggtcagc gtatggagat attccgagta cttttcctcc
     6061 ttttgaattt cccgatatga cttttgcgaa tatgagtaaa ttgattgggc cagcttttgt
     6121 tattgcgatg ctcggcggga ttgaatcact tctttcagcg gttgtggcag atggaatgac
     6181 gaatacaaaa cacaatagta atcgcgagct cattgggcaa ggtatcgcaa atattgtaac
     6241 gccaatgttc ggcggaattc ccgcaacggg agctatcgca agaacggcaa ccaacattaa
     6301 taatggcgca actagccgtg tctctggcgt tatccacggg attttcgttt tactcacttt
     6361 acttgtactt gcaccagtag ctgtcaatat tccaattgct gcaatggcac cgattttaat
     6421 gctagttgct tggaatatga gtgaacgaaa aaccttccag cacattatta agttgaaatc
     6481 gggcgatact ttagtgctaa ttattacctt tttattaaca gtatttgcaa gcttaactgt
     6541 ggccgtcgaa gttggtttgc tgctggcagt ggtgcttttc gctaaacaaa tgggaagttc
     6601 gatgcaaatt gaagaaatcg aaccagaagg cgccgaaatt gctcctcatt tacacgagaa
     6661 aattagtatt tttactattc gtgggccgct tttctttggt gcagcacaga ttttccaaca
     6721 aaatattatc aaagcaatcc atgttaaacc aaaatatctt atcttgcgaa tggggaaagt
     6781 gccgattatt gatgctacgg cagaaggcta tttccaccaa attgaaaaag aattttcgaa
     6841 gcaaggcggg caaattttga ttactggact aacagataaa gcgaaagaaa gtttgaaggg
     6901 tagcgggctt tacgaccgaa tcggcgaaga acacttcttt tcccataccg aagatgcgat
     6961 tcattatgcg gaaaatgctt taaataaggg agactgatag cttttgtcag ttgaaacgta
     7021 attatgttac acttagtaga taatgaaata attggaggct atcaagtatg gaacaaatgc
     7081 aagataaaat aataaaacta gtccaaaaat cgctaacgta taaaccagcg caaatcaatg
     7141 ccgttatcaa attaatggaa gaaggcaaca cagttccatt tatcgcgcgg taccgtaaag
     7201 aaatgactgg tagcttagat gaagtagaaa tccgtgatat cgaagaaacc tttgaatatg
     7261 taacaaaatt agaaaatcgt aaagaagaaa ttattcgcct aatagatgaa caaggaaaat
     7321 taacagacga actgagagcg gcaattacca aagcggaaaa acatcaagcg ctcgaagatt
     7381 tataccgtcc ttacaaacaa aagaaacgca caaaagcaac gattgcgaaa gaaaaaggat
     7441 tagagccgct tgctgattgg ctaatgagct tcccaagtaa cgcggaccca ctgaaagaag
     7501 ctgcaaacta tatttcagaa gaaaaagaag tggagtcagc agaagctgct ttactcggcg
     7561 cacatgaaat catcgcggaa caaatcagtg atgagcctag tttccgtgag tggattcgta
     7621 actttacgcg caaatttggg atgattgaat ccagagcgaa aaacgccgaa gtagacgaaa
     7681 aaggcgttta cgaaatgtat tatgaattta acgaaatgat tggcaaagta gcaagtcacc
     7741 gcatccttgc atttaaccgc ggagagaaag aagacatttt acgtgtacaa gtccaagtag
     7801 atacgacaaa aattttccaa tatttatttg aaaaagttat ccaaaaccgt aattctgcaa
     7861 cacgaccata cgtagaagaa gctataatgg atgcttataa acgctttatc ggaccggcaa
     7921 ttgaacgtga aattcgcggt gaactaacag aaaaaggcga agaacaagcc atccatattt
     7981 tctccgagaa cttgcgcaaa ctacttttac aaccaccttt aaaaggaaaa atcattcttg
     8041 gggtcgatcc ggcttttaga acaggttgta aattctctgt attagatcaa acggggaaag
     8101 tactagaaat tggcgttgtt tatccacata cagcaaaagc acgccgtccg gaagccaaac
     8161 aaaaaattgc ggagatttta tccacataca aagtggaagt tatcgcaatt ggtaacggaa
     8221 cagcctcacg tgaaacagag caatttattg tggaagtgat tcgtgaatcg aaatcgaatg
     8281 cttattattg tatcgtcaat gaagctggtg cgagtgttta ttcagcgagt gaaacggccc
     8341 gcgaagaatt cccagactat caagtagaag agcgtagcgc tgtttcgatt ggtcgtcgtt
     8401 tgcaagatcc gctagctgaa cttgtgaaaa tcgatccaaa atctgtaggc gtagggcaat
     8461 atcaacatga cgtagcgcaa aaacgtttaa atgaaacact aactttcgtc gttgaaacgg
     8521 ccgttaacca agtgggcgta aacgttaata cggcctcggc ttctttgtta caatatgttg
     8581 ctggcttaaa caagacagtc gcaaataata tccgtaaata tcgcgaagaa aacggctcgt
     8641 tcgcttctcg taaagagttg aaaaaagtac ctcgtcttgg ggcaaaatcg tatgaacaaa
     8701 gtatcggttt cttacgtatt ttggaaggtg aaaatccgct tgataaaacc gccattcacc
     8761 cggaaagtta taaggcagct gaacaaattg taaaagcagc tggtttcgga ttgaaagata
     8821 ttggtagcga ggatttaaaa gccgcacttc aagcgcttag tatcccagaa gaagcagaga
     8881 aattaagcat cggtaaagaa accatgcgcg atatcattga taatttaatt gctcctggtc
     8941 gcgaccttcg tgacgaactt ccagcaccac ttttaaaaca agatgttatt tcgatggaag
     9001 atttaaaaca aggcatggaa ttacaaggaa ccgttcggaa cgtagttgac tttggcgcat
     9061 ttgttgatat tggcgtgaaa caagacggcc ttgtgcatat ttcgaaacta agcaattctt
     9121 ttgttaaaaa cccgatggat gtcgtttcag taggagacgt tgtaactgtt tgggtagatg
     9181 aagtagatac aaagaaaaac cgtattgctt taactatgct taatcctaat ggaagtgtta
     9241 aataatgaat caagcagaat tgcagcgaca catggaagaa gtgtcgctgc aatttttcca
     9301 aaaagaattt cgtcaccaag ccgtgtttaa tgcgcgctta cgaaccactg ggggacgtta
     9361 tttgctaaaa agtcatcata tcgaaatgaa ccccaagtac ctagaaaact ttggattagc
     9421 gtactttatc gggattatga agcacgaact atgtcattat caccttcatt tagagaaaaa
     9481 aggctatcag catcgcgatc aagatttccg tgagttatta aaaaaagtag acgcaccgag
     9541 attttgtgca acgataccac gtgaaattac catgcatgaa tatacatgca aaagttgcgg
     9601 gaagtccttt ttaagacaac gcagattcaa tgtgaaccgt tatcgctgtg gcagttgtgg
     9661 tggaaaatta atacaaacag gttccaagaa aatttataca gaaaacgcat gaaaagtctt
     9721 gcaattttac taagttctgc gtatactagt ggaagtcaga taattccaca gtagctcagt
     9781 tggtagagca atcggctgtt aaccgatcgg tcgcaggttc gagtcctgcc tgtggagttt
     9841 ggggaagtac tcaagtggct gaagaggtgc ccctgctaag ggtataggtc gctcgcgcgg
     9901 cgcgagggtt caaatccctc cttctccgta ataacttata aagacattgt ttaggaaact
     9961 aagcagtgtc tttttttgcg gaaaaatagc gatagatttg cgtctatatg tatgctaaag
    10021 ttattttgaa agataagctc aagttgcaaa taacataacg taaatactcg gaggtgcaaa
    10081 atgaaggtta tccattttta tagtgaaaat gcggactatg gctgtttctc taatttctct
    10141 ttacatccaa ttgtcataga cggcgtgact tacccaacca cagaacacta tttccaagca
    10201 caaaaattta tagataaaaa aattattaaa aaagtaatta atacgaaaaa accaatagat
    10261 gcagcaaaat tgggtagaaa tagagacttc ccactgcgaa aaggctggga aagtatgaaa
    10321 gacgaagtga tgttaaaagc aatcagagca aaagtagcgc aacattcgga agtgaaagaa
    10381 atgcttttaa ccacagagaa tgctatttta gtggaacata cggaaaatga tcattattgg
    10441 ggcgacggcg gagatggctc tggaaaaaat cgtctaggca agattttgat gaaagtcaga
    10501 gacgaatgga actctaaata gtgggaggta gcttaaatgg aaccaataaa tcattttttt
    10561 gaatgggcta aaaataataa ttggcaagta gatttgtctg ctgtagagaa aaacttgcca
    10621 gagcagattt taaagagata tggaaagttg ccagatgcat ataaggcctt ttatagacaa
    10681 cttaacctct gtagcaatgt gggtgacact tgttggtttt tgttggaaga agatttttta
    10741 gagaatgagg atgacgcctt ttcgtggaat tcttttgaac aaatgagttt agaagcagca
    10801 gaaggcgata caaacttaga aaatgaagta aaactatttt ggaatgcaca tttaccaatt
    10861 atgatgagtg ttggcggttg ttatgaatat tatgctatca ctttaaatga cggaaatatt
    10921 gttcatggtt cggaaccaga gtttgaagaa agttcgattg tagcagactc gttcgcggat
    10981 tttttactga aaatcgtggc tggagaaata gtgataagtt aaaattaatt aggaaatttg
    11041 ctataataag aaaaacgttt cagaaaggaa tcgactatgg ataataaact agaatttaca
    11101 acgattgatg aatatattac ccaagcgcca ccggaaacaa aagaagtgtt gcaaaaaatc
    11161 agagaaacga ttaaagcagc tgcaccggaa gcaacagaaa aaatcagtta tcaaatgccg
    11221 actttttatt tggaaggaaa cttggtgcac tttgctgttg cgaaaaatca ctacgggttt
    11281 tatccagcct ctagtggtat tgcggcattc gaatctaaac tcggaaatta caagcattca
    11341 aaaggtgctg tacagtttcc aatcaaagaa gaagttcctt atgaattaat taaagaaatg
    11401 acacttttcc gactagcaga aaataaacaa aaagcagcag aaaagctagc aaagaagaag
    11461 aaaaaataag aaggagactt tcattgtgat gatgaaagtc ttttttgttc ggtcttttat
    11521 tttaaaaaga ctagacattt aaaattaaat gagtataata ataaatagaa aacgttttct
    11581 ttttagaaaa atatcatgtt tgggggaagt aaagtgaata agtttatgga gttacttggg
    11641 gaaaagttaa tgcctcttgc tgcaaaacta ggagagaata ggtacttaac cactttaaga
    11701 gatgctttca tgttggcatt tccgctaaca atgtttggtt cgattgcggt ggttttaatg
    11761 aatctaccgt tttggagtga tgaaacgaag gcagttttac agttgtatct tgggaatgcc
    11821 caaagcgcca cgatgagtat tatgactgtt tttgttgttt ttggaattgg atattcacta
    11881 tctaaatatt ataaagttga agcaatttat ggaggggcag ttgcccttgc tagcttcttg
    11941 attttaacgc catttttctt taatagtcct gatggagagc ttattactgg agcgctttcg
    12001 ttagatcgac ttggggcaaa aggtatgttt atcggaatga ttactggttt tattgctgca
    12061 gaattatatc gattttttgt tcaacgggat tggacaatca aaatgcctgc aggagttcca
    12121 cctgctgtag ctaaatcatt tgcagcactt attcccgcta tcttaacatt aagtattttt
    12181 ttagcaatta atgttatggt acaattcttc ttccatacaa acttacatga tgttgtttat
    12241 actgttattc aaaagccttt agtggggctt ggttcaggaa ttgttccaac actaatcgct
    12301 ttattttttg tccaagtatt atggtttttc ggactgcatg gtcaaatcat cgtcaactcg
    12361 gtaatggacc cgatttggaa tacgttaatg cttgaaaatt tagatgccta taaagctgga
    12421 ctcccattgc cacatattat tacgaaacca tttatggaag tctttactgt tggtatgggc
    12481 ggatctggaa tgactttagc agtcgttatt gcactagcat tcttaatgaa gagtaagcaa
    12541 agtaaagaaa ttggtcgatt agcacttggg ccaggaattt ttaacgttaa tgaaccggta
    12601 ctttttggta tgccaattgt attaaatgca acgattttaa ttccatggat tattgcgcct
    12661 ttgattgtaa ctactttgaa ttatttcgtc atggcagctg gtattgttcc tgctccaacc
    12721 ggggttgctg ttccttggac ggtgccaatt gtcatcaatg gtattcttgc aactaactca
    12781 tggctaggcg gggcgctcca agtagtcgat ttcttcatcg tcctcattat ctggtatccg
    12841 ttcttaaaac tagtcgatcg gacaaatatt gcgagagaat cagaggcagc tatcaaataa
    12901 gttaaatttt ccttttcgat atgctataat ttgactagaa atggctagac atttttaatt
    12961 caagcgaagg agcgatcgaa ttggttaagt atgaattgat tgcagcagat atccgcgaaa
    13021 aaataaacaa cggtacttat ccaccagaat ccattcttcc tgatcaagtg agcttgtgta
    13081 aagcttatga ttgtagcaga atgacaataa aaaaagcctt tgacgtttta gcgcttgaag
    13141 gacttgttta cagacaacgg ggtgcgggga cttttgtcat gaaaaatgcc ttagctaata
    13201 agcaagatgc gagtttgcgg gattatgacg gtttgacaaa aatgatggga gacaaccgaa
    13261 tctcgagtaa aattattgca ttcgatattg ctttcccaga tgaaaaaaca caagaacaac
    13321 ttttaataaa agcagaccag ccagtgtaca agttgattcg gttacggctc ttggacggcg
    13381 caccatatgt gttagagcat acaacgatgc cggcagattt agttcctggt ttaacgaaag
    13441 aaattttgca tcattcgatt tatgcatact tacaagattc acttggactc gtgctaagcg
    13501 gtgcctttcg gaaaattaat gccgataagc catctgaata tgatcaagaa tatttagcgt
    13561 gcggggaaca cgacccagtt ttagaagtgg agcaagtagt gtatttgaaa gatggtagac
    13621 cagtggaata ttctagatca agacatcgct atgatacgag aagttttatt atggttgacc
    13681 accgagaaaa gtaaaataaa gtcagcatgc ccgtaaagca tagctgactt tgttttatgg
    13741 aggtaaaaat gtataaaaaa cttccgatga aaaaaatgta aataaaatta gaaaaagccg
    13801 ttgacagtca ctcagattat gttataataa aaaagctggt gtaagagaaa tgaattcaat
    13861 tgaatatata ttcatttttc gttttttatc tggcccgttg gtcaagcggt taagacaccg
    13921 ccctttcacg gcggtaacac gggttcgaat cccgtacggg tcactttttt attcattttt
    13981 tatacatatg gttccgtggt gtaggggtta acatgcctgc ctgtcacgca ggagatcgcg
    14041 ggttcaaatc ccgtcgggac cgctcaaaaa gaatccaagc aaaacttgga ttcttttttt
    14101 cgtacaggaa attggacaga actttttatt tgagctataa tcttattatt catataagaa
    14161 ttgtaaggat taaattggag gaatgaatca tggatttagt gaaaaatggg aaagtgttag
    14221 aacttgtaca tccaaatggc aactggacat taattaaaga agaaggtttt tctccagttc
    14281 aaataacagt ggctgcggtt gctgcttgta gcggatatgt ctatcaaaca ttacttgaga
    14341 aaaaacgaat tgagataaat gatttaagca ttcataccga ttatgagcaa gatcaagaaa
    14401 gtgctgtgca tgttttaacg aaaattaatg ttacttttac ggtggattta gtagataaaa
    14461 gcaatgaagc gaaagcggaa aaagcggtgc atttagtgaa agatgcttgc ccggttgcga
    14521 aaagtttaga tccgtcgatt gaaattaacg agatggttgt ttttaaataa aatgatttat
    14581 agaccaagcc gtggtgtttg gtcttttttc tgtttagttt ggcttgataa cttaaaggga
    14641 aggctatata ctgaaaccaa acaatacaaa cgaggtgctg gaatatggca gagaaaacaa
    14701 tagtagaaaa attacaactg actaaatata aagaagcagt tatcctaaat caaccaaatg
    14761 gagcggattg tttccaaaat ctagcaaatt acgaagaaaa actagcagac aaacaatacg
    14821 atttaatttt cgattttgtg gaaacgctag aagaattaat tacgttcgtg caaaaagtta
    14881 ttgctgaaaa taaacttgct gcgaatggtt atttattttt cgcctatcct aaaaaaggca
    14941 ataaaaagtt cgctacatat gtacaccgcg atgaactcat gccagcgctt aaaaccgatg
    15001 aagaaggcta cgtcgacggt agcacactca aattcacgcg aatggtcgcg ctcgatgaaa
    15061 cgtacacggt agttggtcta aaagaagcag caaaactaaa agcgaagggc gttaagaaaa
    15121 ataacccttc cgcagatgaa tacgccgacc atgtacctct agtcgccgaa tttctagcag
    15181 acaaaggtga tttacaagcc ttctacaaca atctagcaac aggataccag cgggtttggg
    15241 cgcgctatat ttactctgcc aaacaaccag cgacacaaga aaaaagacgt ttagagatgg
    15301 ttgatatttt gagccaaggt tataaaacga aagatcttta ccgacaaggg aaaaagtaac
    15361 caaataattt tatttggtta tttttgcgtt tgaaactgct tctttatgta aaaatgtcta
    15421 ggcgtgatag aatagaagag gaataagacg aaggaaaatc ttgttgcact ggaaaagggg
    15481 acatgcagga tggcgaatta tattaacaaa gaaaggcgcc aaattgattt tgatccattt
    15541 gatttacgga taattgccgt accagaagta gtagcggtgc agtttaagcc gcgctcagag
    15601 catactttac ttattcgtat tgcggatgtc ggcgcaacct atcagccact caaaaacgaa
    15661 tcactttttg aagctatttt gcccgttcac tttaatgata ttaacgaaga agatgattac
    15721 tgggggctta gtgacaaaga gcaagcggag atgaaactat ttaacgaggt acatcgcgat
    15781 ttgatttata attttgtgga tgagcaccca gattttacgc agattgttgt ccattgtcac
    15841 gctggggtca gccgaagtag cgctgttgct atggcgattg cggaacattt acgcgacacg
    15901 gacacgtacg aaaaacttca agtgataaaa cgatacttac caaatccgcg ggttcttgcg
    15961 attatgcggg gcgaagcgta tttataaaaa cgaaaacgaa gaaatgttag gagagatttt
    16021 gtatggaaaa gcattatgat tatattgcga ttggcggcgg aagtggcgga attgcttcga
    16081 ttaatcgcgc agccatgcac ggagcaaaat gtgcattaat tgaaccaaaa tttttaggtg
    16141 gaacttgtgt aaatgttggt tgtgttccga aaaaagtcat gtggtatggc gcacaaatta
    16201 aagaagcgat ggatttatac gcagatgcgt atggttacca agtggacgcg agcttcaact
    16261 tccaaaaact agtcgaaaat cgagaagcgt acattgaacg aattcgaggt tcttacaaaa
    16321 atgggctgga taataataaa gtagaatgga ttaaaggtta tgccgaattt gtcgatgaaa
    16381 aaacattgcg cgtaaacggc gaactagtga cagcagatca tattttaatt gcaacaggcg
    16441 gcgaaccagc gcttccttcc attccgggcg cagaatttgg catcacctca gatggctttt
    16501 ttgcattaaa agaactacct aaaaaagtgg cggttgttgg cgcgggatac attgcggttg
    16561 aactagctgg tgtattacaa caacttggct cagaaacgca tttatttgta cggaaacatg
    16621 cgccactccg aaatttcgat ccacttttaa cagatacact aaccgaaatt atcgagcaat
    16681 cggatatgac gttgcataaa cacgccgttc cgcaaaaagt cgaaaaaaat ccagatggca
    16741 gtttgacgtt gagcttagag gatggccgca cagaaaccgt tgatacgctt atttgggcga
    16801 tcggacgtaa acctgtcatc caaggtcttc aaatcgaaaa agcgggcgta aaacttctag
    16861 aaagcggaca tatcgccgta gataaattcc aaaacaccaa tgtagcgggg atttatgcag
    16921 ttggcgatgt aacgggtcat tatgaattaa ctccagttgc aattgcagcg gggcgccgtt
    16981 tatcagaacg tcttttcaac aacaaaaaag atgcacattt aaactatgaa aatatcccaa
    17041 ccgttgtatt tagccatcca gctattggaa cggtcggttt aacagaacca gaagcaatcg
    17101 aaaaatatgg caaagaaaat atcaaagtgt acacttcaag ctttacctca atgtatacag
    17161 ccatcacaga ccaccgcgaa ccttgccgaa tgaaattaat ttgcgaaggg aaaacagagc
    17221 gtgtcatcgg cttgcacggg attggttacg gtgtggacga gatgattcaa ggattcgctg
    17281 ttgcgattaa tatgggcgca acaaaagccg atttcgacaa tacggttgcg attcacccaa
    17341 caggatccga agaatttgtt acaatgaaat agaaaacaac gatggaggag gaagtacgta
    17401 atgggaaaaa aattatcact ttattttgta agacatggtc aaacctactt aaataaaaac
    17461 ttgcgcatgc aaggatgggc tgatacgcca ctaacaccag aaggaattga aatagtcaaa
    17521 gaaagtggtc gcggacttgc ggaaacagaa ttcgttgcag cgtattcaag cgacttacac
    17581 cgtacgattg caacagcagg gcatttatta aaagaaaata aacacgcatt tggtttaaca
    17641 ctagaaccat taagtgaatt tcgggaaact ttctttggct cctacgaagg tgaaaaaggc
    17701 gatgttgcct ggaacgaaat tgcgcatcat atgggttatg cgaatcaaga agacctattt
    17761 aaaaatgccg atgtacgaga aacaatgaat ggtacaaaag cagctgaccc aacaggagat
    17821 gcggaagatt tcatgacatt ctggacacgt gtagaacaag gtttcttgca tgttatcaat
    17881 cgtcatcgcg aaactggtgg taacgttctt atcgtcgctc acggaaatac tattcgtaac
    17941 atcgtccacg aactcgaacc atccatggac gaagcggtta ttttagataa cgcgagtgtc
    18001 accgtactag cttacgaaaa cggcttattc aaattagaac gtttaaatga cacttcccat
    18061 tttaaaaaag catagaaaaa acgagcttta ggaactagtt tcccaaagct cgttttttta
    18121 ttctttcggt gtatccggat caggaagatt attatcaatc gccagctgac ctcgccgcaa
    18181 tttaattaaa cgattaacat tcacaataat tgttttcaca accgcataaa gtggaacacc
    18241 taaaatcatt ccaaagattc ctgctaagtt tccagcaaca atcaagataa tgataatagt
    18301 tagtgggtga atcgatagtg atttacccat aatatatgga gaaagtaagt tagagtcaat
    18361 ttgttgcaca atcgttacga caacaataac gagcagtgct tggactggag aagtaaatag
    18421 cgccacgata actgcgggag ctgctccaat gaatggtcca agataaggaa taatattcgt
    18481 tgcacctgca ataaaaccaa acagaagcgc atacggttga ccaataatta aataaccaat
    18541 gaaagtaaat aaaccaacaa acatacaatc aatcgcttgt gaactaatat aagtagaaat
    18601 ggttttattc atttctttaa taatttgttt tgcttcagaa cgaatacctg ccgggaaaaa
    18661 tcttccagag gactcaacga acttatgacc atctttaaac atataaaaga cgataaatgg
    18721 tacagttaca agaatcataa caaaactaga gacaaaggag acaatggctc caaaactaga
    18781 agctaccccg tcaacgacca cagacatgat ttttggtaag gaaatgttga gcttctcaag
    18841 ttcttgtttt atgtctaaat cttttagtgc agaattattc gagagatctt gcagccattt
    18901 ttcaaaatct tgccagtaac ctggtattgc ttttgcgagt tcagctactt ggtcagcaag
    18961 cgttggaccg agttgcatta ctgcaagaac aacaagcgtg ataaaggcaa taaaaattaa
    19021 aataacactc aaaagtcgag gtacttttct tttttctaaa aataatacga gcgggttaaa
    19081 taaatagaat aggaaccctg cgaccaaaat cggcataaac aatgtagaaa ctatgatgcc
    19141 gattggtgaa aatatgtact tcatttgcaa tagaacgaac aaaatagcta caaccgctaa
    19201 aatttcaatt gtccaaaaaa ataatttact atctcgaaat cgtgaaaatt tcaaattctc
    19261 cccttctttc taaaacctta ttgataaatt ttatagtacc attaactgct ttaaatagcc
    19321 actgaattac tgctattgac gcataagtat atgtgttata caatgtatat aacagttaaa
    19381 ggagaggtgt ttctatgcta cttgcgattg atcttcaatc agacgagccg atttatacac
    19441 aaatatgcaa tcaaataatt gaaggtatgg cgaaacggga acttttacca ggggacaaat
    19501 taccttctgt tcggagtctt ggcgcagata ttggtattaa ttttcataca gtaaacaagg
    19561 cctaccaaat tttaaaacaa gaaggattta ttcaaataca tcgtcaaaag ggagtagtta
    19621 ttcatccgga tggcgtagct aaggcagatg agctattttt tgctaaatta caaacgaagc
    19681 taaaaccact catcgcggaa tcggttgtgc gcggtgttac cgaagagaag tggctcgaag
    19741 taagtaaggc tatttttgac gaaatgcatg gacggagagt ggagtagaaa tggaaatcat
    19801 catttatatt tttgttagta ttgctatcat ttcactgcaa gcaataaccc cttttgtaat
    19861 aagaaaatca gaatgtttcg gagtaaatgt aggcgaacgc gctaaccgaa atgcggaatt
    19921 aacgcggcta aaaaaacaat atgtcgggca agtggttttg tggacctctt tcgttgctat
    19981 tatcggaatc gcattaattc aaggctttca ttcgagtgag aacatgcaag cgggtatttt
    20041 tattgcttcg atgtttggac aattaatcgt ttcttttatt atttattatc gctttcacca
    20101 cacaacttta cagtggaaaa gagataaaat agaggcggga gaaatttcga ctaattctat
    20161 catcatggta gatactagtt ttcatcgcag aaaaatggtt atctcgtata catggtttgt
    20221 cgtgccactg cttatcttca ttattacact tgcgattacg gtcgtttttt atccagtagc
    20281 tcctgctgac tttccaatcc attttgatat gagtggggca gtgacggata cggttgccaa
    20341 atcacctaga gtcgtattgc tattaccgat gatgcagcta ggaatgattg cgttatttat
    20401 ctttattaac tttgttattg ctaggagcaa acagtccgta gagaacgaaa accctactga
    20461 ttcattaaaa aggggactcc tatttagaca gatttctagt aaagcaatgt taattatgtg
    20521 tacgattatg gtaattgatt ttctcatcat gcaagtagtc acattactag cacttccagc
    20581 tgaatggatg atgataacaa tgataatttc tgttgttttg attctgtttg gaaccgtcct
    20641 tcttgctgta aaagtagggc aaggcggaag cagacttaaa tttgctgacc aacctgatgg
    20701 tgtcaataag ccaattcggg atgatgattc tttttggaaa gcaggggtta tttattttaa
    20761 tcgaaatgat ccagctttat ttgtagaaaa acgctttggg attggttgga cgattaacac
    20821 agctcgccct gttgcttggt tatcttttat cattattatc gctgttatta ttctcattag
    20881 catcttgttt taacttgctc tcagacgggt atttaccata tggtatacgg ataaattagc
    20941 ttgtgtgaga tgcttttgtg aaggagtaga taatcatggc gattagatta aagcgactgg
    21001 aggaatggga aggattcact ggtattgcgc tcgttcgaga aggtcttaaa acagaagcac
    21061 ttcatacaga aataaaaaca gccttcaaag aaatgcttca acttgcgcga gaactagatg
    21121 atttttccaa acaaaaaacg ttttatggta tttctgtcca taatatagaa gacggaatta
    21181 ctcattattc ggtaattcca gtggaacaaa aatatcctca tttacaagaa ccgcttgagt
    21241 ggattgaagt tccggctcat acgtattttg tggctgagca tattcaggat acagacataa
    21301 gtgaaagtta tgaagagatt gccagagcca ttcaagaaaa aaattacaaa ccatatatta
    21361 cagcgaacaa ccccgttttt gacccactac cattcaaatt ggaagtgtat acgaaacaag
    21421 gaagcgacgg agcaaatatt gaaataagga ttcctgttgt aaaagaattg catacgtaag
    21481 aagaagcctg ggacttttgt tctgggcttt tttatactag caagctgttt ttgagtgtgc
    21541 tataataaaa acgctatttt gtgattattt taacaagaag gaagggattc atgtgggata
    21601 ttatagcccg caggaagtaa cagagattac gattgaaaaa gggacccaaa aagcaaattc
    21661 aagtacgtta acgcttgtgt tgttaggctt tttaggtggg gcctttatat ctcttggtta
    21721 cttattatac atacgtgcag taggaacaat gcctcacgaa tggggaagct ttgcaacgct
    21781 tatcggcgcc agtctttttc cggttggcct cgtttgtatt ttgctaggtg gaggagaatt
    21841 aattaccggc aacatgatgg ctgtcgcgat tgcttggtac gacaaaaaga tttccttcca
    21901 acaattactt agaaactggg cgattgtgtc tgtcatgaac ttagtgggcg cattttttgt
    21961 cgcttacttc ttcggacatt tcgttggctt aacagaaggc gatttcttac caaaaacgct
    22021 agctacagct ggcgcaaaaa ttaacgatcc tttctgggtt gcttttgttt ccggaattgg
    22081 ttgtaactgg tttgttggga ttgcggtttg gctttgctac gcggctaaag atttcgcagg
    22141 aaaaatcctt ggtatttggt tcccggttat ggcatttgtt gctatcggat ttcagcacgt
    22201 tgtcgccaac atgtttatta tcccagctgc gattttcgct ggttactatt catgggcgga
    22261 tttcatttgg aacatcatcc cagtttactt aggaaatgta gtcggtggag cagtttttgt
    22321 tagcttattc tacttcattg cttataagaa aaacgcacct aaaaaagtaa aagaagaaat
    22381 acaccaacca attgaagaaa gttaagaccg aaaaagctag ttacattcga tgtagctagc
    22441 tttttttgaa aaaaattaaa gttttttaga gactgttctc gttcccgcca tgttgggata
    22501 gaatgacttt ttccaaaaac cattttgcca cttgaaaaag aaaatcctga ttaaattttt
    22561 cgatttgtgg aaaacactat tataagcaac gagagcacgt gcagaaaaat tttttgagga
    22621 gtggtatttt tgagtattaa agaaacagcc ttaccaaaag ttcaaacaaa attatttatt
    22681 aatggaaaat ggacggatgg agataataaa gaaacaaaag atattgtaaa cccagcaaat
    22741 ggagaagtta ttgccaaaat cgctcaagct ggaccaaacg aaaccaaaaa agccattaaa
    22801 gctgcaaaag aagcatttcc tgattgggca aaaatggaac tagctgatcg cgtcaaatta
    22861 ttacacaaaa ttgccgattt aatggaagaa aaagcagata cactagcaaa aattatgacg
    22921 cttgaacaag gtaaaccgct aaaagaatca aaaggagaag tcctaactgg cgcagaaaac
    22981 ttccgattcg ctgcagaaga agcaagaaga ttatatgggg aaactatccc agcgccaaac
    23041 aatcacgcgt ttatcgtcaa aaaacaacca attggtgtag ttgcggccat tactccgtgg
    23101 aatttcccag gtggtatggt gacacgaaaa cttgctccag cgcttgcaac cggaaataca
    23161 atcgtattaa aaccttccgg agatacgccg ctttcagccc tagctatctt tgaaattttt
    23221 gaagaagccg gcttgccaaa aggtgttgcc aatatcgtta tgggtagctc caaagaaatc
    23281 ggcgaaacat taactgacag tgatgatgtt cgtaaactaa ctttcaccgg ctccacgaaa
    23341 gtcggtcaaa cactattcaa acaatcagcc gaaacactga aaaaaatctc gctcgaactt
    23401 ggtggacatg cgccatttat cgtatttgat gatgcaaacc tggatgctgc tgtaaatgat
    23461 ttagttgccg caaaattccg caataacggt caagtatgtg tatcgccaaa ccgaattttt
    23521 gttgccaaag aaattaaaga aaaattcact aaggcgctag ttgctaaagt aaaacaacta
    23581 aaagtaggta acggtttaga tgatgtgaat gttggtccac ttatccgtga agatgcgatt
    23641 gacaaaatcg acaaacaact taaaaatgcc acagataaag gtgccaaagt cctaactggc
    23701 ggcggtcgtt taacaggttc cgactatgac aaaggcaact tctacaaacc aactgtctta
    23761 gataacgtta ctcgtgaaat ggacattttt tatgaggaaa catttggtcc agtaatcccg
    23821 cttatcacat ttgaaacgga agacgaagca atcgaaatgg cgaatgacag tgaattcggt
    23881 cttgcttctt acttctacac taaagattta gcacgcgtag aaaaagtggg agcagcacta
    23941 gaatacggaa tggtcggagc aaatgaaatt gtcatctcta atccggaaac tccatttggc
    24001 ggcgttaaac attctggttt cggtcgcgaa aatggccact acggaatgga agaatacatc
    24061 caagtgaaat tcattaactt aaaatatcgt gactaacaca agctattaag aaactccttt
    24121 gcttcaagca aaggggtttc ttttttatgc agtttcctac cagtaggaaa aaaacatatt
    24181 tgtaagcgga ttcagctgtt tatataataa aagtaagtta aggaaaggga ggatacaaaa
    24241 tgaaaaacat tttactcatt tgtgggtcag gagcttcaag tggattcatg gcagcagcaa
    24301 tcagaaaagc agcaaaaaaa cgtggagaac aagtgacggt gaaagcagcc agtgagtcac
    24361 aaatagatga aagaattaat gaaattgatt acttattaat cgggccgcac ttagcttata
    24421 tgctggatga cttaaaacaa aaagtagccg ataaaaatgt tttagtatca attattccgc
    24481 aagcaactta tggcacactt aacggtgaaa aagcactcga tctcatttta actatggagg
    24541 gataacacga tgaacaacaa agtgatggat tttatgacaa ataaatttgc tcccaaagta
    24601 aataaagttg ttaaaaatcc ttgggtatca gcaattcaag atgcaattat gtctgcgctt
    24661 ccgctcgttt ttgtcggttc tttagtcacc atcgtttcac tacttaaaaa tttatttccg
    24721 ggcatgcctg atttttcgat gataagtaat ttttcgtttg gcatgtttgg gttagtcgtg
    24781 gcctttttaa tcccatatta tctgatggag aaaaaaggaa atagcagcca aaaattaatt
    24841 tctggcgcaa ctggacttgt tctattttta atgctactat ttccaactat ttcagcagac
    24901 ggggatgccg ttttcatttt atctagattt ggagcgacag ggatgttctt atccattaca
    24961 accggattat ttgttggttg tgtgatgaac tttgctgcga aacgatcatt tttcagtgaa
    25021 gatacaccga ttccggattt tgtcgttggt tggttcaata gcttgctacc aattacattt
    25081 attctgattg ttggttggtt aataactgtt caatttaata ttgatttctt tgaagtgatt
    25141 gtggcagtgt ttagtccact cgcgtcaatc gtacaatctt atccaggctt tgtgctttcg
    25201 gttttcattc cagcatttct ttatacattc gggatttctg ggtgggttat gatgcccgcg
    25261 atttacccgg tttatatggc aggactcgca gaaaactcac aagctgtagc aaatggcgca
    25321 agtgcatcga acatcgcaac acaagaaact gtatacgcat taatttcaat cggcggggtc
    25381 ggcacaacct tatcactatc cattatgatg ctcattttaa gtaagtcttt acagctaaaa
    25441 gcaatcggaa aagcagttat tgtcccatcg atttttaata tcaacgaacc attatttttc
    25501 ggggcaccaa ttgccttcaa cccatactta atgattccaa cgtggattaa tgctttcttg
    25561 gttccaagca tcgcctattt cgttatgtcg atgaacttag taagtattcc cgcgcaatcg
    25621 ttcttgctat ggtacatgcc ttatcctgta acgtcttacc ttgcaacaca agatttccga
    25681 ggtgtgattg cttgtttagc aattatcgtc atcacatggc ttgtctactt gccgttcttt
    25741 aaagcatacg acaactcctt actcaaacaa gaaaaattag atgcaatcga aacagagaaa
    25801 gaaatggtaa caaattgatt ggaggaacta aaatgtcaga gcaagactat gttgaagaaa
    25861 cagatagctt aaatgaacta tccatgaata tattaatcca tgctggaaac gcaagaaatt
    25921 acctagtgaa aggtcttaac catttagagg aactagcgtt taacgaagcc gaggaattta
    25981 tcgcctctgc caaaaaagaa attgtcatcg cgcatagtct gcaaacagat acacttcaat
    26041 tagaagcatc aggcaatcaa atccgttatt ccacgctgtt ctgtcatgcg caagatacac
    26101 tcatgacagc caaaagtgaa atattaatcg gcgagcatat gctacgttta ttcaaaaaaa
    26161 tgaccgaact tacgaaaaaa taggaggtac gagcatgttt gaaaattatc aatttccaaa
    26221 agacttttta tggggaggag ctatcgcagc caaccaagca gaaggcgcat ttaaagtaga
    26281 tggaaaagga attagtttag cagatttgca caaatatcat aaagggaaaa caaatgatga
    26341 aatcagtgag gaacaacata aaggtgtaag tttggctgat atcaaagcaa gtatggaaga
    26401 caaagtgaac tattatccga aacgccacgg tatcgacttt tatcacacgt atccagaaga
    26461 tttggctttg cttgctgaaa tgggctttaa aacatttcga acttcgctgg actggacacg
    26521 gatttttcca actggcgaag aaacagaacc aaatgaagcg ggattaaaat attatgacca
    26581 attaattgat aaaattatcg aacttggcat ggagccaatt attacgatat tacattacga
    26641 aacgccggtg gaaattgtct taaatcatgg cggttggcat aatcgtaaag ttattgattt
    26701 atttgagaag tacggcaaaa cggtacttga tcgctacaat aaaaaagtaa aatattggat
    26761 tatcattaac caaattaatt taattcaatt cgaaccattt aactctactg cgattccata
    26821 tgatgccgtc gatgattatt tatccgctac gtatcaagct gttcataacc aatttgttgc
    26881 aagtgcgaaa atttacgaat acggaaaagc gctaaatcct gatttaatga ttggtacaat
    26941 gctcgctgat tgcacagcct atccattctc ctgcgatcca gatgatatcg tactcgcaat
    27001 gaaacgcaac cgcatggaat atttcttcgc agacgtgcag ttccaaggcg aatatccaca
    27061 gtatgcgctt aattactttg acgaaaataa tattcatata gaaatcacag aagacgacaa
    27121 agccatttta caaaaaaaca ccatggatta tttagcactt tcctattatt attcccaaat
    27181 ggtggactcc aagaaaaatg atttggaccc agcttcgatt acaccaaacc cgcatcttaa
    27241 agctaatccg tggggctggg cagtcgatcc gaaaggcttg tataacgcat tgtcgcagta
    27301 ctgggacaga tatcataaac caattatcat tgccgaaaat ggttttggaa tgtatgacaa
    27361 attagaaaat ggcgaaatcc atgatgatta ccggattgat tatttatccg cgcatctaaa
    27421 agaaatgaaa cgcgccatgt atgacggcgt agaaattatc gcatattgcg cttggggacc
    27481 gattgatata gttagttgct cctccgcaca aatggaaaaa agatacggtt tcatttacgt
    27541 tgatttagat aacgaaggaa acggtacagg caaaagaatt aaaaaagaca gcttttcatg
    27601 gtataaaaaa gtaatagagt ctaatgggga agacttagaa gcttaatgta acagagcgcc
    27661 agttgtggta gttgatagct aatacaactg gctttcgata tatagggggt aacaaaaaat
    27721 ggatactcaa aaagaaatac tagcttattt gcataaacag gaaaataagt gggttacctc
    27781 aaatgagtta gcagcttttt gcgagtgtac aacacgaacc attcgcaaca acatttctaa
    27841 aataaatgaa gcgacaccga atttaattcg ttctgcaaaa caaggctatc aaatcaacca
    27901 gcgtattcca tttgaacttc agacagaaag tgatgtaaca gaacgaaagt caaaactctt
    27961 actcgaatta attaaaaact ctactaaagg cgttgacctg tttgaacttg cggatatttt
    28021 atatatttca gaagtaacct taaaaaaaga catccaacaa ttaaaaaacg aactaaaaga
    28081 agccgatgtc caaatcgtca ccagtaaaga ccgaatcaaa ttaatcggaa aagaacgtgc
    28141 caaacgaaaa tatatgattt ccttgctata tgaagaaggc ggataccgtg aaagtatcaa
    28201 aagtcgcatt caagaaatga ttgaatttgt ttctatcgat aaactgcaaa acatcgtaaa
    28261 agaagtttta acggaagaat ccattacaac caatcaatat tcgatgatga acattgtctt
    28321 acattacgcc attagcatcg tccgaattca acaaggaaat acactcattg aaacccaaaa
    28381 aacactcatc cgaaaacact ccaaagaata cgaaatatcg aaaaaaattg ctaaaattct
    28441 ctcggaagaa taccaaatcc atttttcaga ggcagagaca aaacaactcg gacttttata
    28501 tgttggcttg caaaatgaac aatctgctaa tgccaatcat ggcgaactgg accaatttgt
    28561 cgataaaaaa atcatcgaag cacttaaaag cgtgctcgcc aatgtggaag aaacctatct
    28621 catcgatctc caaaatgagc aactttttat caagctagcg attcacgtcc aaagcctata
    28681 ctatcgctca cgttacaaag cgtacaccag aaatttaagc ttacttgata ttaaaacgtc
    28741 ttacccagta acttttgata ttgctgttta catttcttct ttgctacaag aaaaactagc
    28801 gattgacttt aacgaagatg aaatttcttt tatcgcgctg catatcggct cttttctaga
    28861 aagtgaaaac cgagattata ttcgcttaga aataggccta cttattgagg attatcacga
    28921 tttaagaaca aatatgctga aaaaactgcg cgcacgattt gaaaatgaag ctaccatcaa
    28981 actgatagaa aacgaggact ctgaagaaaa ttttgatatc attttaacaa caaaccgaga
    29041 tattgctctt gaaaaagcgg gttccatttt tattcatccc ttactaacga cgaaggatat
    29101 caagaaaatc agcaatcgaa tccaaacaaa gaaaaaaatc ttggaaaatc acttgcgagg
    29161 tcaacaaatt gatcgctaca tcgttcgttc cctctacgcc aaccaaattg acccctcaga
    29221 actgacaccc gcaaaaatca gagagcaaat gatttctaaa atggaaaaac aaaccttcgt
    29281 cacgccggaa tttaaagaaa aagtcgaaaa aagggaacga atggcgccaa caagcttccc
    29341 atccggcatt gctataccac attctatcaa gaatgatgcc cttcaaagtg gtgtatctat
    29401 aatgacgcta caagagccga tttattggaa tgacgtcaaa ataaaaataa ttgctctcgt
    29461 cgccatcagc aaaaaagatg caacagagtt caatgatttt tttgaaaagt ttgtagaaat
    29521 cgtctccgaa ccgattaata ctaaacgttt atcaatggcc gaaagtttcg aggagttcat
    29581 ccaaaaacta aaaatgatga tggaagaaag tgagtaaatg gccacacata agccgtgtaa
    29641 ttctatttac acggcttata aaggttgaag tgacgataaa attacgctat aatataacca
    29701 tcaaacgaaa aggagtgtta tcttaagcca atgaaattct aatcctgtat tatatgaaaa
    29761 aatgaagaaa gctatccaat tctcggatag aaactatttt ttcggacggg attcgtatgt
    29821 tcatttcgca tgataactct ttgctacagg cctttttttg gcgtagcctc gcggattcct
    29881 ctctgaaaat attcaggagg ttatttttta tgtctacaat cgaaataaat caattaaaaa
    29941 tagaagtagc agatagagtt ttagtagaaa ttcctcatct gctagttagt aaaaaagcaa
    30001 gaatcggcat catcggtcaa aatggtctag gaaaaacaac gctaatggaa gtgattgctg
    30061 gcgctaaaga agcaacatct ggcacggtga ctacccaagg aaaacttgct tacatcaaac
    30121 aactttccac tgatacaagt acgaaaagcg gcggcgaaaa aacaagaaaa gcaattcaac
    30181 atgcgatgcg ccaaaaccca agtgttctcc tagcagatga accgacaagc aacctcgatg
    30241 tcgaaagcgt caaacattta gaacgtcagt ggagcgattt ccacggtgcg ctcataatta
    30301 tatcgcatga ccgtaccttt ttagatgcac tttgtacaga aatatgggaa atcaaaaacc
    30361 aaaaaattca cgtatacaaa ggaaactacc acgcgtattt agaacaaaaa caacaacaag
    30421 aaaaccaagc ggaactcgta tacaaagaat ttaaaaacaa aaagcaacaa ctacaagcct
    30481 cccaaacaca ccatgaaatc gaagcaggtc gcattgtcaa acctggaaaa cgcctaaaca
    30541 acaaagaagc cagcgcgttt aaagccggaa aaggcacaca acaaaagaaa caacacagta
    30601 ccatcaaagc tttagaaaaa cgaattgaac ggctcggcaa tgtcgaaaaa ccacatacaa
    30661 ctaaaccaat caaaatgatc accccagaca atcgcgtcat aaaaaaaggt aatacgatac
    30721 taagtgtcaa agaaacaacc tacgagatcg caggacgaaa actatttgaa acaaaagctt
    30781 tttctattaa agcaggggat aaagtggcgc taatcggtga aaatgcgagc gggaaaacta
    30841 catttttaaa agaaataatc caagaaaatc ctaatctcct atgtaatccc caagcgaaaa
    30901 ttgcttattt cgaccaagaa ttgaatggat taaaccaaac gaaatccctg ttagaaaaca
    30961 tctcggaaat tagcgttcaa accaagcaag taaacagaga agtactaggt agcatgcatt
    31021 ttaaagaaag cgatttgcat aaggaagtgc gcatgctctc tggcggggaa cgagtgaagt
    31081 tgctgctcag tatgctcctc gttagtgacg ccaatttctt gattcttgat gaaccaacca
    31141 actatttgga tatctatgca atggaagcgc tggaaacgtt aatcaaacaa tttgcgggga
    31201 cagtactatt cgtttcgcat gatagaactt ttgttaacca cgtggcagaa caattactcg
    31261 tcatcgaaaa taatgaaatg actttccacc ggatgacttt cgcggaatat gaagaaagta
    31321 aagcgccaag tcgcatcaca gaagaagata agttgatttt agaaatgcgc atgtcagaaa
    31381 ttgcagccaa gcttatgcaa ccgaatttaa agcccacaga aaaagccatg ctcgaacaag
    31441 attatcaaga aattatcaca aaaagacaac aatttagtta aattgttgtc tttttattca
    31501 agctaaataa aaaatatagt catttatatt ttacttgatt tctgcaaaag ataggcttag
    31561 aatcaaatag ttattaaaaa gagtaaagaa agaaggaatc ccatgtttag tcatcttccg
    31621 gattcattcc tccaaatgaa taccattttt atttctattt tgattgaggc actgccgttt
    31681 gtattaattg gagtatttat tgctggcttt attcaaatgt ttatatcaga acaatttatt
    31741 gcccgtgtta tccccaaaaa taaatttcta gcagtcattg ttggctcgct tattggtgta
    31801 tttttccctt cctgtgaatg tggcattgtt cctatcgttc gtaatttact ggcaaaaggg
    31861 gtaccgcttc atgctggtat tgccttcatg cttaccgctc ctattatcaa cccagtagta
    31921 ttattttcaa cgtatgttgc atttggtagt acgtgggaag ttccgttgct acgtgttgcg
    31981 ggaagtcttg tagtagctct cgttgtcgga aatattatcg cttattttta taaaggaact
    32041 ggactcaaag agcgcttttt aaaatatgaa gcagctagtg aaaaagtggc cgttccagca
    32101 acaaatctag cgcttgctgg tggtccttct gaaagtacga caactaattt ccaagtccta
    32161 acaagcgacg gagcacttac agaagacgct cataaaggac acgcgcacca ccatcacggt
    32221 gaggagcacg cgcatacaaa aatgacattg agtcaaaaaa tatggcatac cgtacaacac
    32281 gcagtcgatg aattcttctc tgtaggtaaa taccttgtgt ttggggcttt aattgccgca
    32341 gcgatgcaaa catacattaa aacatccaca cttgtttcca taggtcatgg tccgatttta
    32401 tccatcttac ttatgatggt tcttgccttt gtattgtccc tttgctctga agctgatgcc
    32461 tttattggcg cttctttccg tagtgttttc tccacacaat ccatcgttgc atttttagtg
    32521 ttcggcccaa tgcttgatat taaaaatcta atgatgatgt taggagcatt taaagcaaaa
    32581 tttgtcttat taattgttac tagtgtaacg attgttgtct ttttatacgc cttagttatt
    32641 taaccgaaag aaggtgaaag tatgtttcgc gtttttattt tatttggatt tggtttttat
    32701 ttgatgcagt tacatatttc tggtgatatc agtaaatata taaatatgaa gtacgcttat
    32761 ttatcttttt ctgcgatgat agccgcattt ctacttgcga ttattcagct cattatggtg
    32821 tttcgcgatg aagatattgg tgcaaaaaca gaacatatgg ggcacaccca tgatggcgaa
    32881 aataccattt tgaaaaaaat tatggtgtat ggtttacttt cttacgcctt gattgcaggt
    32941 tttcttttcc ccgtcgcaac acttgattcg accattgttt cggcaaaggg atttcatttc
    33001 ccaaaaaaca atgcagctgg tgatgaccca tacgctcaaa atcaattttt aagaccagat
    33061 acgagtggct attttgggga aaccgattat gaaaaaatga tggcgaaaga aaaagcggaa
    33121 atcatcgatc aaaatccaat caaagtcaat gatagtaatt acttaatgac gatggaaatt
    33181 ctttataatt atccagggga gtttactggg aaacaaatcg aatttaccgg ttttgtttat
    33241 aatgatgaag tcacccaaga taataacttg tttttgttcc gttttggaat aattcactgt
    33301 gttgccgatt ctggtgtgtt tggaatgctt gttcaaatgc ccgaaaaaac cgatttgaaa
    33361 aacgatacat ggcttacagt aaaaggaacc atcacccaag aatattattc tccgttcaaa
    33421 atgaacatcc cgtctgtaca agtagaaagc tataaagaag tagcaaaacc aaaatcagtt
    33481 tatgtttatc gtaaatatta aatcgctact tgcggattta tgcagcttgc gttatcctta
    33541 aataaagctg tttacgtttt cacgaatgaa ttaaaggatg gaacattgaa tgaatgatta
    33601 caaccactac tttcatttcc cacgagaaga atggcgcaag ctggaagtga gtaaggacca
    33661 aattttaact gcagaggaac tggaagaaat acgtggttta aatgaccgaa tttctttaca
    33721 agacatctct gaaatctatt taccactaat aaaactaatt gcgattcaat accatgaagc
    33781 gatttttatt catggcgaaa aaatggaata cttaaagaaa aaagaatcgc gtgcaccatt
    33841 tattattgca ttagcaggaa gtgtggctgt tgggaaaagt acgacagcgc gtgttttcaa
    33901 attaatgctt gatcgctggt tctccaaaac cagacaagta gagcttgtga cgacagacgg
    33961 ctttctttat cctaacaaag ttttagaaga gcgcggtatc atggacaaaa aaggcttccc
    34021 tgaaagctac gaccgcgacc gttttgccaa gtttttaacc gacttaaaag caaataaaga
    34081 agatgtcgaa attccacttt attcgcattt cacttatgat gttttagacg aaacccgtgt
    34141 gatccataat ccagatatcg tcatcattga aggaatcaat gttcttcaag cagatcaaca
    34201 tgagagcctg tttccaagtg acttctttga tttctccgtt tacatggatg ccaatgaagc
    34261 ggatattaag aaatggtatt tagaacgttt cttcatgctt cgcgaaacag ctttccaaga
    34321 tgaaagttct tatttccacc catatactaa aattagcaaa caagaagcag aaacatttgc
    34381 actcggggtt tgggatacaa tcaacggcgt caacttaaaa gaaaacattg agaaaacaaa
    34441 atatcgagcc gacttagtgc ttcaaaaagg cacagatcat ctcatttcag acatttattt
    34501 acgcaaataa ccgaatgcag atagaaggaa acttcttgat gcattcggtt ttttctttac
    34561 attggagaaa atccgagtac aatagaaagt gagtaatcac tcatttgaaa aagggaggga
    34621 aagcaatgtc agaaatagcg attaaagttt ctaatttaga tgtgaaaatt ggaaagaaac
    34681 aaatcttaac caatatgact ctcgaaatag aaaagggcga gatatttggc ttaatagggc
    34741 catccggtgc aggaaaaaca acactcgtga aaaccatcat cggaatggaa aaggcaacga
    34801 atggcacaac tgaggtttta ggaaaagcaa tgccaaattt accagtcatt agcaaaattg
    34861 gttacatggc ccaatcagac gcactttata cggatttaac agccaaagaa aacttggatt
    34921 ttttcgcttc actatattcc atcaaaggtg cagccaaaaa agaccgaatg aattatgcag
    34981 ccactttagt taatttacaa caagatttaa ctaaaaaggt gaacaattat tcaggaggga
    35041 tgaaacgcag gctgtctctg gccatttctg tccttgctga cccagatgtc ctaattttag
    35101 atgagccaac agtcggtatt gatccagaac taagaaaaac gatttgggca gagctaggcg
    35161 atctaaaagc gaacggtaaa tgtatccttg tgacgacaca cgtgatggat gaagccgaaa
    35221 aatgtgatag acttgccatg atcagaaatg ggcaaataat cgctgtaggg accccacaag
    35281 agctctcaag taaaacgtca tctggtaagc tagaagatgc ctttttagag tttggaggga
    35341 agcactaatg cgaatatttg ccattgtcaa acgcatcatt aaccaatttc gccgtgataa
    35401 acggacgctt gccctaatgt ttcttgcgcc acttttactt atcacactgc tcacttattt
    35461 attcgaaggt gacacagtga agccagttgt tggtgtaagc gggctttctg actccatggt
    35521 aaaagaactg aaagcaaatg atttaaccat caaaacttac tcggaaaata ccgatgtaac
    35581 cgctaaaatt aaagatgcca acctcgacgc tttttttaaa caaaacggtg aaaaactcga
    35641 agtcacctat gaaaatagtg aaccaagctt gagtaaggaa atcggattaa aactacaaaa
    35701 agcaatgatg acggagcaac aggcacaagt gaaaaagcaa gcgaaagcaa ccggtgagtc
    35761 acttgctaaa gctggtattg atccaaacac cattccttca cttacacaaa gcccagaaaa
    35821 gctcagcatc tcaacaaact acgtatacgg agataaaggt actacctttt tcgacacaat
    35881 cagcccgatt ttcattggct ttttcgtatt ctttttcgta tttctgattg ccggtatttc
    35941 tttcttgaga gaacgaacaa caggcacgct tgaaagactt atggcaaccc caattaaacg
    36001 tatcgaactt gaattagggt atttaatagg ttttggtatt ttcgcgttac tacagtctat
    36061 cttagtcgca gttttctcca tccaagtact tggcatgatg caaaacggct ccttattcta
    36121 tgtgttactt attacattaa cactcggcat ggtttctcta gcgctaggaa ttttactttc
    36181 tactttcgca aataatgaat ttcaaatcgt tcaatttatt cctatcgtta ttgtgccaca
    36241 agtcttattt tgtgggattt tcccgctcga tggcatggca gattggctcg tgtggattgc
    36301 ccatattatg ccgctttact acggcgcaaa tgcactaaca tccattatgg taaaaggaga
    36361 aggattcgct tcgtttgcaa ctgatttcta cattttacta ggatttgtgc tcgtatttgt
    36421 tatattaaat atttttgctt tgaaaaaata ccgcaaagtt taaatgaaac aggaggagat
    36481 aagacgtgga tgcagaagga gacattatcc gtcaaatgct tgatttaacg gaaaaagaaa
    36541 caaagatgag tgaaaagcag cgccgaattg tcgctgcttc catcgaactg tttgcagaaa
    36601 aaggctatgc cggaacttca acgaatgaaa ttgctaaaaa agctggggtc gcagaaggca
    36661 ccatttttag acactataaa acgaaaaaag atttactaat ggcgattacc atgccaacgc
    36721 ttatcggtgg tgtgatacca tttttggcac aaagctttgt caaagaagtg tttgaaagtg
    36781 agtatccaga ttttcagtca ttcattcggg aaatcatcgt taatcgcttt gattttgcca
    36841 aagagaatgg taaggtcatc aaaatttact ttatggaact gttttatcac gatgagttaa
    36901 gaatacagtt ttcagaaatt tttatgacac atgtcaaagg gcaatttgat caaatgattg
    36961 attattataa agagcgcggg gaaattgttg atatgccgaa cagcacgatt atgcgcgctc
    37021 ttatcacgaa tattgtcgga tttatgctaa caaggtttgt cgtgatgccc gacgtggagt
    37081 gggatgatgc caaagaaatt gatgatacgg tggcgtatat tatgagaggt ttaggtaagt
    37141 aaaaaagagt ccagatattc tggactcttt ttctcattta tcggatgaat cagttgattt
    37201 tttcttattg taattgtatt tacttggatc cacttttttg aaaccatcag gagcatagaa
    37261 acgtaacaag tcaccttgta gtacagaatc tgaaagctct aattcttttg ctactttttc
    37321 ttttgtttct ttcatttctt ttgtttccgt agcaattggt tccccagttt gttgattata
    37381 catgttacca ccaatcattg aataggtagg agttatataa tcaccatttc ggaatggaac
    37441 aagttgttta tggtctttag aaagtaaatc tgtaccaaat tgtaagtact ctttattatc
    37501 aacaccaagt aagtgaagta atgtcggaag taagtcaact tgaccaccgt attgttcttg
    37561 aacgccacct tgaacaccag gaacgtgaat cattaaagga acacgctgcg cttgggcatt
    37621 ttcaaaagtg ttgtaatctt taccaagaat ttttgtcatt gcttcttcat ggttgtcgga
    37681 aataccataa tggtcaccgt acatgataat gacagagtta tcgtaaagac cagatttctt
    37741 caagtaatca acaaagctct tcacagattc gtctaaataa cgagctgttt ggaaatacgt
    37801 atctacagat gaatcgcctg ttgttgccgg agcaatcgaa gcatctttct catcaattgg
    37861 ataagggaag tggttcgtaa gcgtaataaa tttcgtgtag aacggttgtt gtaatgacga
    37921 tagatattct tcggattcct taaagaatgg tttatcttta agtccgtagt tagaaacatc
    37981 tgcttcgttc atatcgtagt aactagcatc aaagaaatta tcgtaaccaa attgtttata
    38041 aatttcatca cgattccaga agctcttata gttaccgtgg aatacagcac ttgtatagcc
    38101 ttgttggcct aaaatagcag atgcagattc ataagtgttt tgccctttag ttgtaaaggc
    38161 agaaccttga ggcaagccgt aaagcgagtt ctcaagtaac atttcggagt cagctgtttt
    38221 accttgacct gtttggtgga agaagtttgt aaagcttagt gtattttggt ctttaaagaa
    38281 agagttaata aacggcgtta cttcttctcc atttaatttg taatttacta ggaattgttg
    38341 gaaactctct aaatggatat aaatgacgtt tttgcctttt gctttaccaa aatattccgg
    38401 atttggc
//
LOCUS       DASDYK010000011        37693 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.011, whole genome shotgun sequence.
ACCESSION   DASDYK010000011 DASDYK010000000
VERSION     DASDYK010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 37693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37693
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.011"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(231..1679)
                     /locus_tag="U0308_000640"
     CDS             complement(231..1679)
                     /locus_tag="U0308_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HEM2315650.1"
                     /translation="MTKEAEIGKQIFIHVGGMENVSRIAHCMTRVRLGIVDSDLVNVA
                     GLKKVPGVIGVVEDDTLQIIVGPGVVNKVAGAMAEMAGVKIGETIQENLDSGTKTGKE
                     LVEEKASKTKAELKAKQNNSSGFKRLLKSISNIFVPLIPGFVGAGLIAGIAAIISNNI
                     TAGNLDAAVWTQYIDILGVINKGIFAFLAIYVGINTANEFGGTPVLGGGIAGITLLSG
                     LAEGHTITNIFTGDPIVAGQGGIIGVLLAVWLMCVLEKNLRKIIPNAIDIIFTPTLVL
                     LIIGLVTIFLIMPFAGLVSDGLVNGINWVIEVGGVFAGFVLGTLFLPMVMFGLHQVLT
                     PIHVEMIAQNGYTILLPILAMAGGGQVGAAIALWIRCRKNKPLVNMIKGGLPVGILGI
                     GEPLIYGVTIPLGKPFLTACLGGGIGGAVIGYFGNVGAIAIGPSGVALIPLIANNEWL
                     SYVIGLIAAYLGGFILTYFFGTPKDAMNSVEL"
     gene            complement(1692..2582)
                     /gene="murQ"
                     /locus_tag="U0308_000641"
     CDS             complement(1692..2582)
                     /gene="murQ"
                     /locus_tag="U0308_000641"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HEM2315651.1"
                     /translation="MLENLATEERNEKTIDLDTLSPKEILAVMNEEDLTVPIAIKKVL
                     PQIELIVSGVISCFQKGGRLIYLGAGTSGRLGVLDAAECVPTFGVSKEQVIGLIAGGE
                     KAFVAAIEGAEDSKILGENDLKQIKLTANDFVIGIAASGRTPYVIGALDYAKSVGAKT
                     GAISCNANAKISAHADIAVEVVTGAEILTGSTRLKAGTAQKLVLNMISTASMVGIGKV
                     YKNLMVDVLPTNKKLEERSKRIIMEATEADYETANKFYEAAEKHVKVAIVMILTNSTK
                     EIALEKLSEAKGFVRNTIQK"
     gene            complement(2723..3574)
                     /locus_tag="U0308_000642"
     CDS             complement(2723..3574)
                     /locus_tag="U0308_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2315652.1"
                     /translation="MSNGSIINRIEGILNDLPKSEKKIGQAVLANPEFTTTASIHKLA
                     QQADASGAAVIRFCKSIGLQSFPELKRQLSLDLAQPQKKGYYDIEPNEDFHTITEKLV
                     SNMIQTMNDTASQLDEAKVLEACELLGEADTIYTYGVGASWLVAEDISQKWLRAGKHV
                     LATQDAHVLAMAFATGKKKAVFIAISNSGETSEVLQLVDQAKLNNVIVISLTRFGSNK
                     LKEKADLSLETSRAPEAEIRSTATSSRQAQLLVIDILFYYYASHHYDEMIQQIKHSRE
                     ATNRFRE"
     gene            complement(3662..6073)
                     /locus_tag="U0308_000643"
     CDS             complement(3662..6073)
                     /locus_tag="U0308_000643"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEM2315653.1"
                     /translation="MTFNHKKMEPKWQQYWSEHNTFKTTEDKNKDNFYALDMFPYPSG
                     AGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQYAIDTGNDPEEFTAL
                     NIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGLAYEAEIAVNWCPA
                     LGTVLANEEVIDGKSERGGFPVFRKPMRQWMLKITAYADRLLDDLDLVDWPENIKDMQ
                     RNWIGRSEGAEVTFKIKDSDETFNVFTTRPDTLFGATYTVFAPEHELIEKITTPEQKE
                     AVEAYKKQVELKSELERTDLAKDKTGVFTGAYAINPINGEEVPIWIADYVLIQYGTGA
                     IMAVPAHDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAIT
                     AAIDWLEKEGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLLLP
                     KATEIKPSGTGESPLANLHDWVNVTDKNGRKGRRETNTMPQWAGSSWYFLRYIDPNNS
                     EAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQG
                     MILGENNEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARK
                     FLDRIWRLLVTEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIF
                     INEAYKQDTIPKQYVEGFVQLLSPIAPHLAEELWEILGHTETISYVAWPTYDETKLVE
                     DEVEIVLQVNGKVKSKITVAKSLEKEELEKIAQEDNKMKENLEGKTIRKVIVVPGKLV
                     NIVAN"
     misc_binding    complement(6147..6348)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            6477..7442
                     /locus_tag="U0308_000644"
     CDS             6477..7442
                     /locus_tag="U0308_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465186.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HEM2315654.1"
                     /translation="MKQTNPFVYSNDNKRYHTWNYCLREEFGQKTYKVALDGGFDCPN
                     RDGTVAHGGCTFCSAAGSGDFAGNRALDLKVQFQQVRDKMQTKWKDGKCIAYFQAFTN
                     THAPVAELREKFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQS
                     AHDETGRLINRAHDYDCYLEGVHKLQKHNIRICTHIINGLPKETPEMMMETTRKVVES
                     GVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIHRITGD
                     GGVDDLIGPVWSLNKFEVLNAIDAELVRRDSWQGKHYQPVEVISE"
     gene            7439..8017
                     /locus_tag="U0308_000645"
     CDS             7439..8017
                     /locus_tag="U0308_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2315655.1"
                     /translation="MNLRGILPFAHDTLRKVVRPGDYVIDATCGNGHDTLLLAELVGI
                     NGHVLGFDIQQMAVDATKARLENAGVSSQVELVCASHARIPAYTSRPVRAAIFNLGYL
                     PGGDKEITTTADSTLESIGHLMQLLEVGGVIILVIYHGHPAGKIEKDAVVTFCEAIPQ
                     QDFHVLSYQFINQKNDAPFVIIIEKRKPRQAN"
     gene            complement(8039..9904)
                     /gene="asnB"
                     /locus_tag="U0308_000646"
     CDS             complement(8039..9904)
                     /gene="asnB"
                     /locus_tag="U0308_000646"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HEM2315656.1"
                     /translation="MCGFVGCVHDRITEITGADKETFRQMNSMITHRGPDDEGYFTDD
                     HVQFGFRRLSIIDVENGHQPLTYENERYWIIFNGEVYNYVELREQLVAEGMTFETESD
                     TEVIIATYAKYKEKTAERLRGMFGFVIWDKQEELVYGARDPFGIKPFFYAEEDGKLFM
                     GSEKKSILHALKEKELDEVSLQNYMTYQFVPEPDSLTKNVKRLEPGHQFTKKIGQPME
                     ITTYWKASFAPVTKSEDAWIKEVRDVMYDSVKMHMRSDVPVGSFLSGGIDSSIIAAIA
                     KEYHPAIKTFSVGFERDGFSEIDVAKETADKLGVENISYVISPEEYMKELPKIVWHMD
                     DPLADPAAIPLYFLSREARKQVTVALSGEGADELFGGYNIYNEPNSLAMFNKMPSVFK
                     SMLNSVARIMPEGMRGKSFLERGTTPMEERYIGNAKMFTEKEKQILLPKYQAGHDYTN
                     ITDPFYAETTNYHPVERMQYIDIHTWLRGDILLKADRMTMANSLEVRVPFLDKEVYNV
                     ARNIPDTMKTTNGTTKYILRKAAATFVPEHVLNRRKLGFPVPIRHWLKDEMNAWVKNI
                     IKESPTDHLINKQYVLGLLDDHCAGKFDYSRKIWTVVIFMIWYDVYVADKYDFGK"
     gene            complement(10041..11240)
                     /locus_tag="U0308_000647"
     CDS             complement(10041..11240)
                     /locus_tag="U0308_000647"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEM2315657.1"
                     /translation="MAKNRHLFTSESVSDGHPDKIADQISDAILDAIISKDPDARVAC
                     ETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQS
                     PDIAQGVDEALESRSGKEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLAR
                     KLTELRKTNKLDYLRPDAKTQVTVEYDEFNQPVRIDTIVVSTQHHPDITQEQIAKDLH
                     TYLFPEVIDASFLDEDTKYFINPTGRFVIGGPLGDAGLTGRKIIVDTYGGYARHGGGA
                     FSGKDPTKVDRSGAYAARYVAKNIVAAGLAKKVEVQVAYAIGVARPVSISIDTYGTSD
                     YSEQELIDGVNELFDLRPAGIIHMLDLRRPIYRQTAAFGHFGRSDLDLPWERTDKAEA
                     LKKLIVK"
     regulatory      complement(11347..11455)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            11662..11964
                     /locus_tag="U0308_000648"
     CDS             11662..11964
                     /locus_tag="U0308_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315658.1"
                     /translation="MSLIPLSLIIFLGFLAVLCLFDFVFRLYWFKYFLATMGLIASGV
                     VFFISFYGGGMSQTEIAIAIFIGSFGEYVVSLIISLVRFISRKSKKPKQKKKAKTA"
     gene            complement(11997..17135)
                     /gene="lapB"
                     /locus_tag="U0308_000649"
     CDS             complement(11997..17135)
                     /gene="lapB"
                     /locus_tag="U0308_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-anchored adhesin LapB"
                     /protein_id="HEM2315659.1"
                     /translation="MKSKFFTGMMIFLLALICLTGMKAEAKSVGDISPDDISPEISDN
                     RFQSAEGKVLPNFEVDMSISDQSNGKLSIDEDFELTSDGDIILIGTVQGQYIQGTPIL
                     NENGQLNKIPNRDQGIIMRVDRTTKKVEWARVVNYEDGNYNSQYAADKWFSSYKSITT
                     NSSKSAFYVGGEVVNYYGDSGGGSTLIVKSIDANGNFQIAHKSYVSYGVPSRSDLTYA
                     YFMDIQMEGNTLIMSASARYAAQGKQFIRYTLEPASLSITKNEFNPLDNTFWAKYQRT
                     DVLKIDNKGLMAYNADVNGANQLKMSIRESENNYKEITLFDSVPEILANSSPYIFMED
                     RGDGNVFVVMSTPTTWYIALVNIASEQVVETKKMAMNSSTTLNSVIYSEGKGLLLGGS
                     THAEESIFGSEPLNKNNGYYLALGNDLNVTDSQILRTNQHNSLTTIINGVGNKVDGFF
                     SYDGLNNDGYIQNVESPNTYDVNPNGAMIFAEFNLQSAPVLDTGNPILAFYQGERRAD
                     FDELEGVKAYSGIDSSDITKSITKNTFDLYTVGVQQQLYQIEYLPGSGNKTTGTRNIQ
                     LLHPLETPKLEKSYADSHGAFKVGEVVPANAIHAFNGLDSANNVTYVVTAVDDEKITV
                     DASIKRTEGTKTAVISKEITLMTSTADETAVIDVTSVALAAGKYTSLTEVRSEGHFHI
                     YAETMDNVSIDPKYVKLTEDPENPVDWNVPGVYYVTASLDPASGYTAKDVKVSVAVVD
                     VGSPKVISVNMKPYNPTTALVVAEDDINGAGVYKINWAIKDANGLIIQQGVEESGATI
                     RVQTPVPIDLSTLNDGNYTLSVSAADRIGHTSEASEKAFTVDRQAPVVTADDKITYEI
                     NTKKTEEQFLNDVNVKTEAGAVIKTNFDTMVRMDSPGDYTVLVEATDAAGNQSDPIYV
                     IVTVEDTVAPIISADEAISYNQGNTRTEAQFLADIHATTDEPATITSDFADQVKFDTP
                     GVYAVTLKANDISGNQAIPRTVNVTVKDVIAPVITADEAIIYEKGITKSATDFLTDVH
                     AATNDGSAITSNFATVVDLNTPGDYDVTLNSTDAGGNKSDPITVTVTVRDTTPPVITA
                     DTTITYEKGTTKTAAAFLTDVNATTNDGSAVTSNFNPNSLKQVGTYQVTLSAIDENGN
                     YALPVKVTVIVQDTQKPVISSSATSITYERGEKKQETGFFLDLAIKTDDGTPVTSDFD
                     TAVNLDTAGSYTVTLNAEDESGNKADPVTITVTVADTEKPIITADTTITYAKGTTKTA
                     AQFLTDIHATTNDGSTITSNFDPTVLTQEGTYKVVLNAKDDSNNEADPVTVTITVVDT
                     KGPIINALNTITYERTINKNEADFLADIEATTDDGSTITTDFNSKDLDTVGTYTVTLN
                     AEDASGNKATPVKVTMKVEDNIPPIITADQSITYERGITKTEQAFYTDINAATSDNSA
                     ISSDFSKIDLTKTGNYEVLLQATDQSGNKALPLKINVLVQDTIAPVIKTTSREITNER
                     GVPMTEQQLLARIGANTDDGSKITTDYNPAIVNTSGDYLVHLYAVDAAGNQATPVEIT
                     IHVKDTTAPIITADKKISYPVGTDKTVTEFLQDIHATTDDGSKITTDFDPNMLKTKGT
                     YTIHLNAVDADGNKAKTIDVSLTVEEKVTPPTPPTPDDGGNNTNNGSNGTNDRNANIT
                     VNPTKQNTTATNESIPALGDTTSTIPVIVGMFLLATSLVLIRRK"
     gene            complement(17230..18141)
                     /locus_tag="U0308_000650"
     CDS             complement(17230..18141)
                     /locus_tag="U0308_000650"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003741278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HEM2315660.1"
                     /translation="MKRKVGIIGTGHVGSDVAFSLVTQGICDEIVLIDKIETKAESEA
                     LELRDMASMTNSYTTITSNDWSALGDADVIVMAVGPETLLREDRMEELVETSRSVAEI
                     VPKIIASGFKGIFVNITNPCDVITMLIQKLSGFDYSRVFGTGTSLDTARMRRVVGEAL
                     HINPKSVEGYVLGEHGESQFVAWSTVKIGGVSITDYKTTTPLDLPALKDAVRGGGWNI
                     LMGKGWTSFGIATAAAGIVDAILTDAKQVFPLAVFSEKTNTYIGQPAIIGANGVIDIL
                     EPKLTTDEVANFNASAEVIKTAFQLIE"
     gene            complement(18158..18400)
                     /locus_tag="U0308_000651"
     CDS             complement(18158..18400)
                     /locus_tag="U0308_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2584 domain-containing protein"
                     /protein_id="HEM2315661.1"
                     /translation="MGMPLEVNTMIVTKGKEKRISDNFFELEKLGYRIYPIDVPIAVR
                     KTKEGETLGEAIPRKLVWENNKTIIKYELIALNSSN"
     gene            complement(18451..18924)
                     /gene="ytkD"
                     /locus_tag="U0308_000652"
     CDS             complement(18451..18924)
                     /gene="ytkD"
                     /locus_tag="U0308_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase YtkD"
                     /protein_id="HEM2315662.1"
                     /translation="MFIYNDTLGNKVTIYFEAQENNPDDVLIIPKTEDGWLFTEHKIR
                     GLEFPGGKGEPGETNLDAAKRELMEETGAISDELHFVADYLVESEERTFTKRVYAADV
                     ISIESLDDYLETKGPVIIQGELSRFILQPAFSFFMRDAGMVQIVQQAERILNDKN"
     gene            18998..19264
                     /gene="yidD"
                     /locus_tag="U0308_000653"
     CDS             18998..19264
                     /gene="yidD"
                     /locus_tag="U0308_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEM2315663.1"
                     /translation="MKKILIGGIRLYQKYISRFTPATCRFYPTCSAYGIEAIQTHGAL
                     KGSYLAIRRISKCHPFHKGGLDFVPPKKEKNADSEHSCKAHHHH"
     gene            19414..20367
                     /locus_tag="U0308_000654"
     CDS             19414..20367
                     /locus_tag="U0308_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEM2315664.1"
                     /translation="MRKKYLIALTVLFSALLILTGCSDESDKKATKSDQLTVYTTVYP
                     LQYLTEQIGGEYVDVHSIYPPGSDAHSFEPTQKDMMKIADSDLFFYIGLGMEGFVDKA
                     EKTLANEHVSFVPTAEKLDLPKDPDAAEEHDHESEEEHEHGDINPHVWLNPVYMEQMA
                     TVVKDKLIKEMPDQKETFEKNYQAVEKKLKKLDQDFRTVTKEAKQKDFVTAHAAYSYW
                     ETEYGLHQIPIAGVSTSDEPSQKKLKSIVEKIEAEKIPYIMLEQNTNSKIADVIQQET
                     NTKTLTLHNLETLTQKDLDQKRDYLSIMNDNLKALKEGLNY"
     gene            complement(20385..21794)
                     /locus_tag="U0308_000655"
     CDS             complement(20385..21794)
                     /locus_tag="U0308_000655"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HEM2315665.1"
                     /translation="MDMTNWLQKRVRLSPKETALVFEGKEETFEEISEAVKQLAGKLF
                     ALGIRKDEMVALLGKNDRMTFLLIHALQQLGAVTLFLNNRLTKKEISFQLANAEVKHV
                     IVADSLVDKVATGISYATLAETDYEAPALLETWDLSRAASVMYTSGTTGKPKGVVQTY
                     ENHWWSAVASVLNLGLTEKDSWLCAVPIFHISGLSIMMRSVIYGIPVYLEEHFDEEKI
                     TQLLESGKISTISVVTSMLERLLKIHSGSYHPNVRTVLLGGGPASKAVLEICKQRDIP
                     LVQSFGMTETASQIVTLPPKDALNKIGSSGKALFPAEVKIADDGEILLKGPSITPGYL
                     HNKKATEASFVDGWFKTGDIGYLDEEGFLFVLERRSDLIISGGENIYPTEIEHVISEY
                     EGVKEVAVIGKPDDKWGSVPVAFIVAEETFDEAELRLICETNLAGYKIPKQITIVEKL
                     PKTASGKIQRNKLKERHSM"
     gene            complement(21810..22628)
                     /gene="menB"
                     /locus_tag="U0308_000656"
     CDS             complement(21810..22628)
                     /gene="menB"
                     /locus_tag="U0308_000656"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HEM2315666.1"
                     /translation="MSFNWQTEKVYEEIKYESYEGIAKITINRPEVHNAFTPKTVTEM
                     IDAFNLARDNSNLGVIILTGEGEKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLI
                     RVIPKPVIAMVAGWSIGGGNVLQLVCDLTIAADNAKFGQTGPNVGSFDAGYGSGYLAR
                     VIGHKKAKEVWFMCRQYTADEALEMGWINTVVPVADLEKETVAWAKEMLQKSPTALRF
                     IKAAFNADTDGLAGIQQLAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP"
     gene            complement(22625..23452)
                     /gene="menH"
                     /locus_tag="U0308_000657"
     CDS             complement(22625..23452)
                     /gene="menH"
                     /locus_tag="U0308_000657"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HEM2315667.1"
                     /translation="MLVNGRHYHLTTAISGEKPALLMLHGFTGTSETFQDSISGLKEH
                     FNIIAPDLLGHGNTASPEEISPYTMENICEDLAGILHQLNISRCFVLGYSMGGRVATA
                     FAATFPKRVRGLILVSSSPGLEQADIRESRVAADNRLADWIEEEGLVPFVDYWENLAL
                     FASQKVLSPEMKRRIRSERLSQNSHGLAMSLRGMGTGKQPSYWNCLANFTFPVLLITG
                     ALDEKFEKIAQEMHQLLPNSTHVSIQEAGHAVYLEQPNSFSSQLNYWLEDILKEEEK"
     gene            complement(23454..25196)
                     /gene="menD"
                     /locus_tag="U0308_000658"
     CDS             complement(23454..25196)
                     /gene="menD"
                     /locus_tag="U0308_000658"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HEM2315668.1"
                     /translation="MTNHEQVLTDYLAAFIEELVQAGVKEAIISPGSRSTPLALMMAE
                     HPILKIYVDVDERSAGFFALGLAKASKRPVVLLCTSGTAAANYFPAVAEANLSQIPLI
                     VLTADRPHELRNVGAPQAMDQLHLYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDI
                     AMKTPRGPVHLNFPLREPLVPILEPSPFTATGKKHHHVHIYYTHEVLDDSSIQKMVTE
                     CTGKKGVFVVGPIDKKELEQPMVDLAKKLGWPILADPLSGLRSYGALDEVVIDQYDAF
                     LKEAEIMDKLTPEVVIRFGSMPVSKPLKNWLEQLSDIRFYVVDPGAAWKDPIKAVTDM
                     IHCDERFLLDIMQQNMPDDAKDAAWLNGWTSYNKVAREIVLAEMANTTILEEGKIVAE
                     LRRLLPDKAGLFIGNSMPIRDVDTYFSQIDKKIKMLANRGANGIDGVVSSALGASVVF
                     QPMFLLIGDLSFYHDMNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESLF
                     GTSTELDFRFAAAFYDADYHEAKSVDELEEAIDKASYHKGLDIIEVKTNRHENKANHQ
                     ALWVKIADALKALD"
     gene            complement(25193..26581)
                     /locus_tag="U0308_000659"
     CDS             complement(25193..26581)
                     /locus_tag="U0308_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HEM2315669.1"
                     /translation="MNTKLPLDLFNQAKRSASQDQPALFSWVTELDELVSPVKLFKKA
                     GTAFKGERFFWQNPEMTLTMTGFGVTKQFLAEKKKDAFLGLQEKIEKRLRTSVTNATV
                     DATGPIYFGGFAFDPERDTEKEWQSFKDGLFYLPLFMLTNKDGKSYLTVNLSIYSDDT
                     ESKLEAVFNQWQKIIHQEVNEAEMALLTDFKEIGKDHFLETASEIIDMINHSEDVKKV
                     VLARRMGLRFQRQVDSAIILENMLATQENSYFFLIEKGTGVFFGATPERLLAVNGDEI
                     HSSCVAGSTERGATEEADEALGNALLKDAKNLREHSYVVQMMEETLKPFTTGLSLSSQ
                     PVLLKNRDIQHLYMNITAKKKPDVSMLEMVKALHPTPALGGLPQKMGLAIIRMKEEMD
                     RGFYGAPIGWVDLKGSGEFAVAIRSGLIVDSQGLIYAGCGIVGDSVPKEELQETAVKF
                     QPMLRVLGGIKK"
     gene            26756..27694
                     /locus_tag="U0308_000660"
     CDS             26756..27694
                     /locus_tag="U0308_000660"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HEM2315670.1"
                     /translation="MANASKSALTKQTGFQKWWTLLRPHTLVASFVPVFLGTSVAMSY
                     TSFHFTRFIVMLIACFFIQTSANLFNEYFDYKKGQDDEHSVGNGGAIVRNGMRPGFIL
                     FLAIFLYILSILGGVYLSIELNWYVGLLGAICMLVGFLYTGGPYPIAYTPFGEIMAGF
                     FMGGIITFISFYIQAEFISSFIVYVSIPVMVLVGNLLLANSIRDLVPDKKNGRLTLAI
                     LLGRKWATVLFAAAFLFSYVFEIALIFTQDAPWWTLLILLSLPEAIRAVRRFIGKTSP
                     ITMVPAMKSTSKALTIFGITLALAYLLSLLSRNLFM"
     gene            complement(27728..29581)
                     /locus_tag="U0308_000661"
     CDS             complement(27728..29581)
                     /locus_tag="U0308_000661"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HEM2315671.1"
                     /translation="MNLRKDLSEKVLIADGAMGTLLYSYGVDRSFEELNLSHPEDIVA
                     IHKAYIGAGADIIQTNTYGANYIKLARYGLEDEVKRINQAAIRLAKEAARGTGTYIFG
                     TIGGINGAVDARLPAAPLEEIKRSFREQLYCFLLDGVDAILLETYYDLDELKTVLKIL
                     RETTDLPVVANVSMHEPGILQNGKKLPDALEELIALGADVVGINCRLGPYHMARALET
                     VPLYDNAYLAVYPNASLPEMQEGKVIYQSDTDYFEHYGEVFRQEGARIIGGCCGTTPD
                     HIRALRKGLETTKPILEKEVRPILELVPEEVEDVDSGERLLDKVKERLTILVELDPPR
                     TFDTTKFFEGAQALDEAGVDAITISDNSLATPRISNMALASILKHEYGIKPLIHLTTR
                     DHNLVGMHSHVMGFHKLGLHDVLAITGDPTKVGDFPGASSVFDLRSVELVQLIKKFND
                     GISYTGKSLKEKARFHVGAAFNPNVLNLEKAVRLIERKVEYGADYIITQPIYDVNKAI
                     LLKEALQKANIDVPLFIGVMPLLSSRNAEFLHNEVPGIRLTDDVRERMREAEEHGHAN
                     EEGMAIARELVDAICEHFQGIYIITPFLRYDLSIELAKYAQNKQQVQIGSK"
     gene            complement(29578..30750)
                     /gene="metC"
                     /locus_tag="U0308_000662"
     CDS             complement(29578..30750)
                     /gene="metC"
                     /locus_tag="U0308_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HEM2315672.1"
                     /translation="MANEYAQDTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDNYH
                     AYDYARSGNPTREKVEQAIAELEGGTNGFAFASGMAAVSAALFTLSKGDHFIIAKDVY
                     GGTFRFVEQVLPRFGITHTFVDTTNIDEVAKAFQANTKLVYLETPSNPLLHVTDIRTV
                     AKLAKANGCYTFVDNTFLTPLIQKPLELGADLVIHSATKFLGGHSDILAGLIVTNNPN
                     LAEAVYFLQNSTGGVLGVQDSWLLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAV
                     HYPGLPSHAGYDIQVEQATSGGAVLSFDLGSEEAVRELVTHLELPVFSVSLGAVESIL
                     SYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDADDLIADLKQALSFIKKGSVAK"
     gene            complement(30743..31867)
                     /locus_tag="U0308_000663"
     CDS             complement(30743..31867)
                     /locus_tag="U0308_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEM2315673.1"
                     /translation="MAKLKQETIAAQIGNRKCERTGAVNMPVYFSTAYQHADLGVSTG
                     YDYTRTGNPTRDALQEALAELENGTHAFATSSGMSAIQLVFQLFKTGEHIISSQDLYG
                     GTFRYFEQFGAQYNIGFSYWDGAEIADLEKLVRPETKAIFIETPTNPLMQETDIAAVS
                     EWAGAHDLLVIVDNTFYTPILQQPLTLGADIVIHSATKYLGGHNDVLAGAVIVKEERL
                     GNFFFNQLNATGAVLSPFDSWLLIRGLKTLVLRVRQHQANAEKIAAFLESHELVEEVR
                     YPGRGGMISFFIQDAALVSPLLKELELFTFAESLGGVESLITYPTTQTHADIPEELRN
                     SYGLTDKLLRISVGIEASEDLIADLSKALDAVLEGVSARG"
     gene            complement(31889..34186)
                     /gene="metE"
                     /locus_tag="U0308_000664"
     CDS             complement(31889..34186)
                     /gene="metE"
                     /locus_tag="U0308_000664"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEM2315674.1"
                     /translation="MVKAISSNLGYPRLGEKREWKRALEKFWNGTISEKELLAETKIL
                     RLHALKKQQDKGIDLIPVGDFSFYDQVLDTSVTFGIIPKRFQHDGGKVSLNTYFDIAR
                     GKNDAVASEMTKWFNTNYHYIVPELADAEPKVLDNRALYYYEEAKKELGIEGKPVLVG
                     PITYLKLGKGSDAKSFEVLLDKFIPAYVEILKELEAAGAKWVQIDEPYLATSFDKKEI
                     ALFEKVYQAFQTAVPNLKIELQTYFESLDYYEEVVNLPVAAIGIDFVHDHGDSIKALK
                     AHGFPEDKYLAAGVVDGRNVWRSDLDAKLELLTEIANYVADGKLIVQPSNSLLHVPVT
                     KLSEPDLDEVILGGLSFADQKLEEITILTKALTNGAESVAAELEESRAAVTALNESSH
                     RNNLEVQEAIANLKNVRVDRELPFAERIKLQHAWLKLPLFPTTTIGSFPQSPEVRKTR
                     ADWLKGNITDAEYNAFIEKETARWIKIQEDLDIDVLVHGEFERTDMVEYFGQKLAGFQ
                     ATKFGWVQSYGSRAVRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIIN
                     WSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWQKYL
                     DDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIIST
                     FEEVTYDKEIGLGVYDIHSPRVPTVTEIQDNIRRALRAIDAKQFWINPDCGLKTRKEP
                     ETIAALQDMIKATKEVRAEYQVLEK"
     regulatory      complement(34293..34399)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(34476..35651)
                     /locus_tag="U0308_000665"
     CDS             complement(34476..35651)
                     /locus_tag="U0308_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2315675.1"
                     /translation="MGAKGKFWILTMVVAISGLSQGVLLPLIAIILEEKGISAGINGF
                     HATGIYLGVLLISPFIEAPLHKYGYKPIILVGGGLVAVSILAFPIWFNLYFWFILRLL
                     IGVGDHMLHFSSQTWIGAMSDPSKRGRNMAIYGLFFSLGFAIGPQLVNLAKINANLPF
                     FLSGILVLIAWGLVWFVRNDFVAEKAVIRKISFWGSLKRFSDVFKLAWVAMIPPFLYG
                     ILETGLNATFPVVGLRDGLDTMMIAMVISSFSVGTIIFQVPIGIVSDKFGRGKVLPLL
                     TGAGAVVFMLTAFVKIPVLYVVFFFVLGILLGSLYSLGLSYMTDLTPLELLPAGNILV
                     GMCFSLGSIIGPSATGMMIGIFGNQIFYFVVAGILVLGCLLLVFGARKDALEKKMGN"
     gene            complement(35716..35787)
                     /locus_tag="U0308_000666"
     tRNA            complement(35716..35787)
                     /locus_tag="U0308_000666"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(35752..35754),aa:Glu,seq:ttc)
     gene            complement(35793..35883)
                     /locus_tag="U0308_000667"
     tRNA            complement(35793..35883)
                     /locus_tag="U0308_000667"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(35847..35849),aa:Ser,seq:gct)
     gene            complement(35918..35990)
                     /locus_tag="U0308_000668"
     tRNA            complement(35918..35990)
                     /locus_tag="U0308_000668"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(35955..35957),aa:Asn,seq:gtt)
     gene            complement(35997..36070)
                     /locus_tag="U0308_000669"
     tRNA            complement(35997..36070)
                     /locus_tag="U0308_000669"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36034..36036),aa:Ile,seq:gat)
     gene            complement(36096..36166)
                     /locus_tag="U0308_000670"
     tRNA            complement(36096..36166)
                     /locus_tag="U0308_000670"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36132..36134),aa:Gly,seq:tcc)
     gene            complement(36191..36263)
                     /locus_tag="U0308_000671"
     tRNA            complement(36191..36263)
                     /locus_tag="U0308_000671"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36228..36230),aa:His,seq:gtg)
     gene            complement(36292..36364)
                     /locus_tag="U0308_000672"
     tRNA            complement(36292..36364)
                     /locus_tag="U0308_000672"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36329..36331),aa:Phe,seq:gaa)
     gene            complement(36369..36444)
                     /locus_tag="U0308_000673"
     tRNA            complement(36369..36444)
                     /locus_tag="U0308_000673"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36409..36411),aa:Asp,seq:gtc)
     gene            complement(36449..36522)
                     /locus_tag="U0308_000674"
     tRNA            complement(36449..36522)
                     /locus_tag="U0308_000674"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36486..36488),aa:Met,seq:cat)
     gene            complement(36565..36654)
                     /locus_tag="U0308_000675"
     tRNA            complement(36565..36654)
                     /locus_tag="U0308_000675"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36616..36618),aa:Ser,seq:tga)
     gene            complement(36677..36750)
                     /locus_tag="U0308_000676"
     tRNA            complement(36677..36750)
                     /locus_tag="U0308_000676"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36714..36716),aa:Ile,seq:cat)
     gene            complement(36762..36835)
                     /locus_tag="U0308_000677"
     tRNA            complement(36762..36835)
                     /locus_tag="U0308_000677"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36799..36801),aa:Met,seq:cat)
     gene            complement(36878..36950)
                     /locus_tag="U0308_000678"
     tRNA            complement(36878..36950)
                     /locus_tag="U0308_000678"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36915..36917),aa:Ala,seq:tgc)
     gene            complement(36973..37046)
                     /locus_tag="U0308_000679"
     tRNA            complement(36973..37046)
                     /locus_tag="U0308_000679"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37010..37012),aa:Pro,seq:tgg)
     gene            complement(37057..37130)
                     /locus_tag="U0308_000680"
     tRNA            complement(37057..37130)
                     /locus_tag="U0308_000680"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37094..37096),aa:Arg,seq:acg)
     gene            complement(37140..37225)
                     /locus_tag="U0308_000681"
     tRNA            complement(37140..37225)
                     /locus_tag="U0308_000681"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37189..37191),aa:Leu,seq:taa)
     gene            complement(37240..37314)
                     /locus_tag="U0308_000682"
     tRNA            complement(37240..37314)
                     /locus_tag="U0308_000682"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37280..37282),aa:Gly,seq:gcc)
     gene            complement(37330..37411)
                     /locus_tag="U0308_000683"
     tRNA            complement(37330..37411)
                     /locus_tag="U0308_000683"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37375..37377),aa:Leu,seq:tag)
     gene            complement(37417..37489)
                     /locus_tag="U0308_000684"
     tRNA            complement(37417..37489)
                     /locus_tag="U0308_000684"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37454..37456),aa:Lys,seq:ttt)
     gene            complement(37530..37605)
                     /locus_tag="U0308_000685"
     tRNA            complement(37530..37605)
                     /locus_tag="U0308_000685"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37570..37572),aa:Thr,seq:tgt)
     gene            complement(37614..37686)
                     /locus_tag="U0308_000686"
     tRNA            complement(37614..37686)
                     /locus_tag="U0308_000686"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(37651..37653),aa:Val,seq:tac)
BASE COUNT        10821 a         8488 c         6549 g        11835 t
ORIGIN      
        1 atattgaaat tcatcaaaaa aactttttat gttttgtact gttttaatgt aatctatatt
       61 gtttttcgtc gttgacaccc cgttttactt taatactatc aaaacggatt cattatttgt
      121 tatgctaact gcgtaaaaaa gcttcgaaat tagtaataaa actaatttcg aagcttctct
      181 aatcaattca cttcaatgtg tacaaatttc cgtggaacag caattacttc ttacaattct
      241 acgctattca ttgcgtcttt tggtgtacca aagaaataag ttaaaatgaa tccacctaaa
      301 tatgctgcaa ttaatccgat gacgtaagaa agccattcat tattcgcgat tagtgggata
      361 agtgcaactc ctgatgggcc gattgcaatt gctccgacgt taccaaagta gccgattact
      421 gccccaccga taccgcctcc gagacaagct gtaagaaaag gtttcccaag tggtattgtt
      481 accccataaa ttaatggttc accgatacct aaaattccaa ccggtagacc ccctttaatc
      541 atatttacaa gtggtttatt tttacgacaa cgaatccaaa gcgcgattgc tgcaccaact
      601 tgtccgccac ctgccatagc tagaatagga agtaagatag tataaccatt ttgagcaatc
      661 atttctacat ggatgggtgt taaaacttga tgtaacccaa acataaccat tggtaagaat
      721 aacgtcccta gcacaaaacc tgcgaatact cctccaactt cgattaccca attaataccg
      781 ttaactaaac catctgatac aagtcctgca aaaggcataa ttaagaaaat agttactaaa
      841 ccaataataa gtaatacaag cgttggcgta aaaataatat ctatcgcatt cggaatgatt
      901 ttgcgcaagt ttttttcaag tacgcacatt aaccaaactg ctaataatac gccgataatg
      961 ccaccctgtc cggctacgat aggatccccc gtgaaaatgt ttgtaattgt atgtccttct
     1021 gctaatccgg aaagcaatgt tatcccagcg attccaccac cgagtacagg tgttccacca
     1081 aattcattcg cggtattaat ccctacataa atagctaaga aggcaaatat tcctttatta
     1141 ataactccta aaatatcaat atattgagtc caaacagcag catctaaatt tccagctgtt
     1201 atattattag aaataattgc tgcaatacca gcaattaatc ccgctccaac aaaacccgga
     1261 attagtggaa caaaaatatt agagattgat tttagtaatc ttttaaaacc agatgaatta
     1321 ttttgttttg cttttaattc agcttttgtt ttggatgctt tttcttcgac taattcctta
     1381 ccagtttttg tgccgctatc caaattttct tgaatcgttt cgccaatttt aacaccagcc
     1441 atttctgcca ttgcgccggc cactttgttc acaactcctg gtccaacaat aatctgtaaa
     1501 gtatcatctt ctacaacacc gataacaccc ggaacttttt ttaatccagc tacattaaca
     1561 aggtcactat caactatccc caatcgaact cgtgtcatac aatgtgcaat tcttgaaacg
     1621 ttttccattc caccgacatg aataaatatt tgttttccaa tttctgcttc ttttgtcatt
     1681 attccagctc cttatttttg aatggtgttt cgaacaaacc cttttgcttc acttaatttt
     1741 tctaacgcta tttctttggt tgaattggtt aagatcatga caatggcaac tttgacatgt
     1801 ttttcagctg cttcataaaa tttatttgct gtttcgtaat cagcctctgt agcttccata
     1861 ataattcgtt tagagcgctc ttctaatttt ttatttgttg gtaaaacgtc caccatcaaa
     1921 tttttataca cttttccaat tccaaccatt gaagctgttg aaatcatatt taatactagt
     1981 ttctgagctg ttcctgcttt taacctagta gaacctgtta aaatttccgc tccggtcaca
     2041 acttctacgg ctatatcggc gtgcgctgaa atttttgcat tagcattaca agaaattgct
     2101 ccggttttag ccccgacaga tttggcgtaa tcaagtgcgc caattacata aggcgttcta
     2161 ccacttgcag caataccaat aacaaaatcg tttgcagtta acttaatttg ctttaagtcg
     2221 ttttcgccaa gtatttttga atcttccgca ccttctattg cagctacaaa agctttttca
     2281 ccacctgcga ttaagccaat gacctgctcc tttgagaccc cgaaagttgg aacacattca
     2341 gctgcatcaa gtactcctaa tcttccactt gttccggcac caagataaat caaacggcca
     2401 cctttttgaa agcacgagat gacaccgctt acaattaact cgatttgagg taagaccttt
     2461 tttatagcta ttggaactgt taaatcttct tcattcatta ctgctaaaat ttcttttgga
     2521 gaaagtgtgt ctaagtcaat cgttttttca tttcgttctt ctgttgctaa attctctaac
     2581 attttaacca ctccttccaa cacagtataa tataaatgaa ataaaatttc aatatataat
     2641 tttaatatta aaatttttat ttataattgc tagtaaaaaa ataggcagta gctttaatta
     2701 ttaagctact acctatcttc tattattctc taaaacgatt cgtggcctct cgagaatgtt
     2761 taatttgttg aatcatttcg tcgtagtgat gggatgcata atagtaaaat aaaatgtcaa
     2821 ttactagcaa ttgcgcttgt cttgaacttg ttgcggtact tctaatttca gcttctggag
     2881 cacgagaagt ttctaaagat aaatctgctt tttccttcag cttattgcta ccaaaacgtg
     2941 taagactaat aacaatgacg ttgttcagtt tggcttgatc tacgagttgc aagacttctg
     3001 atgtttctcc actgttagaa atagcaataa aaacggcttt cttcttcccc gttgcaaaag
     3061 ccattgctag aacatgtgca tcttgcgtag ctaaaacatg tttccctgca cgcagccact
     3121 tttgcgaaat atcttctgct actaaccaag aagccccgac cccgtatgta taaatagtat
     3181 ctgcttcgcc gagtaattcg catgcctcta aaactttggc ttcatctagt tggctagccg
     3241 tatcgttcat cgtttgaatc atgttagaaa ctagtttttc tgtgatggta tgaaaatctt
     3301 catttggttc aatatcataa tagcctttct tttgcggttg agccaaatct aatgataatt
     3361 gtctttttag ttctggaaaa ctttgaagtc cgattgattt acagaaacgg ataacggccg
     3421 caccgcttgc atctgcttgt tgagctagtt tatgaatcga tgcagtagtt gtaaattctg
     3481 gatttgctaa tactgcttgg ccaatttttt tctctgactt cggcaaatca tttaaaatac
     3541 cttctattcg attgataata ctaccattac tcattaactt ttctccattc cattttccgt
     3601 aattatacca aaaaattagt caaaaataaa actgccagcc agaagccagc agtttccatt
     3661 attagttcgc aacaatattt acaagtttcc ctggaacgac aatcacttta cggattgttt
     3721 tgccttctag gttttctttc attttgttgt cttcttgtgc aattttttct agttcttctt
     3781 tttcgagaga tttggcaacg gtgattttgc tttttacttt gccgtttact tgaagtacga
     3841 tttctacttc atcttctact agttttgttt cgtcgtatgt tggccaagct acgtagctga
     3901 ttgtttcggt gtgacctagg atttcccata attcttctgc aaggtgtggt gcgattggtg
     3961 acaagagttg aacgaaacct tcgacatatt gttttggaat cgtatcttgt ttatatgctt
     4021 cattgatgaa aatcatcagt tgcgaaatcc cggtattgaa acgcaggttt tcgtaatggt
     4081 tggtaactgt tttcaccata tgatgatatg ctttttctaa gttagcattc gcatcagttg
     4141 tcactttttc agcgagtgtg ccttcttcag ttactagcaa gcgccagatg cggtctagga
     4201 atttacgtgc accttccagt ccattttcgt tccatgcaat cgaagcttct agtggtccca
     4261 tgaacatttc gtacaagcga agtgtgtctg cgccgtattt ttctactact tcatcagggt
     4321 taacaacatt acctcttgat ttggacattt tttcgttatt ttcgccaaga atcatacctt
     4381 ggttaaatag tttttggaaa ggttcttttg ttggaactac accgatatcg tacaagaatt
     4441 tatgccagaa acgtgcataa agaaggtgaa gcactgcatg ctctgccccg ccgatataaa
     4501 cgtcaactgg aagccattct gctagttttt ctttgtcagc aattgcttcg ctgttatttg
     4561 gatcgatata acgcaagaaa taccagcttg agccagccca ttgtggcatt gtatttgttt
     4621 cgcgacgacc ttttcgaccg tttttgtctg ttacgtttac ccagtcatgc aagttagcaa
     4681 gtggtgattc gcctgttcct gatggtttga tttctgttgc ttttggcaga agtagtggta
     4741 gttcgtcttc tggtacaagc gttgtttccc cgtcttccca gtgaataact ggaattggtt
     4801 caccccagta acgttgtctg ctgaacaacc agtcgcgcaa acgatacgtg attttacggc
     4861 taccgatgcc ttctttttct agccaatcaa ttgcagcggt aatcgcttcg gctttagcta
     4921 gtccgttcaa gaaatcggag ttaatatgtg gtccgtcgcc agtgaatgct tcttttgtca
     4981 cgtcgccgcc ttcaagaaca ggacgaatat tcaaaccaaa ttgttgcgca aattcaaagt
     5041 cacgttcatc gtgagctggt acggccataa tcgcacctgt tccatattga atcaacacgt
     5101 agtccgcaat ccaaattggc acttcttcgc cgttgattgg attaatcgca taagctcctg
     5161 tgaagacacc tgttttatct tttgcaaggt cggttctttc cagttcgctt ttaagttcta
     5221 cttgtttttt ataagcttca actgcttctt tttgttctgg tgttgtgatt ttttcgataa
     5281 gttcgtgttc tggtgcaaaa acggtatatg ttgcgccaaa aagtgtatct ggacgtgttg
     5341 tgaaaacatt aaacgtttca tcgctatctt taattttaaa agtaacttct gcgccttctg
     5401 aacgaccaat ccagttacgt tgcatatctt taatattttc aggccaatcc actagatcaa
     5461 gatcatctag caaacgatct gcgtacgcgg tgattttaag catccattga cgcattggtt
     5521 tgcggaaaac tgggaagcca ccgcgttcac ttttgccatc gataacttct tcattggcta
     5581 aaactgtacc aagtgccgga caccagttta cagcgatttc ggcttcataa gctaaacctt
     5641 tttcatatag tttttcaaaa atccactgtg tccatttata atattcagga tctgttgtat
     5701 tgatttcacg gtcccagtcg taggaaaaac caagtgattt aatttggcga gtaaagttgg
     5761 caatattcag tgcggtaaat tcttctgggt cgttaccagt atcaattgca tattgctctg
     5821 caggaagacc aaaagcatcc caaccgattg gatgaaggac gttcttccct tgcattcgtt
     5881 tcatacgaga caaaatatct gttgctgtat aaccttctgg atgtcctacg tgaagacctg
     5941 ctccagatgg gtaagggaac atatctagtg catagaagtt atctttattt ttatcttctg
     6001 ttgttttgaa agtgttatgt tcactccaat attgttgcca ttttggttcc atttttttgt
     6061 gattaaatgt cactttactc atcctctttt ccttaaaata tcgaattttg gctacaaaaa
     6121 aatccctaca tcccaacggc ttatcgccat gggacgagag atgcttctcc cgcggtacca
     6181 cccacattag tgtttgacca ctcaacttat caattcctta acgcggaaaa cggggataca
     6241 cccaagctcc atggtaagtt catccggatt ttgtgactga cttgcaccaa ccgtcagctc
     6301 tcttcacatc aaaatatgca gattactact ccaattcatc gctttttcgc aaaattcatt
     6361 agtcttattg tagctgaatt tcattttttt agcaagcgct ctgaagattt atctaacttt
     6421 cctaacaaaa tgtgctaaaa tgaatggaga atttcatttg aaggagtcta aaactagtga
     6481 aacaaacgaa tccatttgta tatagcaatg ataataaaag atatcataca tggaactact
     6541 gcttaagaga agaatttggg caaaagacat acaaagtggc gcttgatggc ggctttgatt
     6601 gtcccaatcg tgacggtacg gtagcgcatg gtggttgtac attttgtagc gcggctggtt
     6661 ctggggactt tgctggcaac cgagcgcttg atttaaaagt acaattccag caagtgcgcg
     6721 acaagatgca aacgaaatgg aaagacggga aatgtatcgc ttatttccaa gctttcacga
     6781 atacacatgc accggttgcc gagttacgtg agaaatttga aactgttttg aatgagccgg
     6841 gtgtagttgg gctttcgatt gcgacaagac cggactgttt gccagatgat gtggtggaat
     6901 atttagctga gttgaatgaa cgtacttatt tatggttgga gcttggattg cagtctgctc
     6961 atgatgagac tggccgctta atcaaccggg cgcatgatta tgattgttat ctagaaggag
     7021 tgcacaaact gcaaaagcac aatatccgga tttgtaccca cattattaac ggtcttccaa
     7081 aagaaacacc agaaatgatg atggaaacaa cgcggaaagt agtcgaaagt ggcgtggatg
     7141 gtatcaaaat ccatttgctc catttattaa aaggaacgcc aatggtagaa gattataaaa
     7201 aaggtgactt agaattttta actcgggatg gctatgtaaa cttagtcgct gatcaactag
     7261 agatcttacc gcctgagatg gttattcacc ggattactgg tgatggtggc gtagatgatt
     7321 taattggccc tgtttggagt ttaaataagt ttgaagtgtt gaatgcgatt gatgcagaac
     7381 ttgttcgaag agatagctgg caagggaaac actatcaacc tgtggaagtg atttctgaat
     7441 gaatttaaga ggcattctcc ccttcgctca tgatacgcta cgaaaagtag ttcgtcctgg
     7501 tgattatgtg attgacgcca cttgtggtaa tggacacgat acgcttttat tagcggaact
     7561 tgttggtatt aatgggcatg tacttggatt tgatattcaa caaatggctg ttgatgcgac
     7621 gaaggctcgt ttagaaaatg cgggtgtttc ttcgcaagtg gaactcgttt gcgctagcca
     7681 tgcacgtatc cctgcgtaca catccagacc tgttcgcgcc gctattttta atcttggata
     7741 tttaccaggt ggcgacaaag aaattacaac aaccgctgat tcgacgctag aaagcattgg
     7801 tcatttaatg cagctgctcg aagttggtgg cgtcattatt ctcgttatat atcacggcca
     7861 ccctgctgga aaaatcgaaa aagatgctgt tgtgactttt tgtgaagcaa tcccacaaca
     7921 agatttccac gttttatctt atcaatttat taatcaaaaa aatgatgccc cattcgtcat
     7981 tatcatcgaa aaaagaaaac ctagacaggc taattaatag ctttgtctag gttttctttt
     8041 attttccaaa atcgtattta tctgctacgt atacatcata ccaaatcatg aaaataacaa
     8101 ctgtccagat tttacgactg tagtcgaatt taccggcaca gtgatcgtct agtaatccta
     8161 gaacgtattg tttgttaatt aaatgatctg ttggtgattc tttaatgatg tttttaaccc
     8221 aagcgttcat ttcgtctttt aaccagtgac gaattggtac tgggaatcct agtttacggc
     8281 ggttaagtac gtgttctggt acaaatgttg ctgccgcttt acgtaagata tatttggttg
     8341 ttccattggt tgttttcatt gtatctggaa tatttcttgc cacattgtac acttctttat
     8401 caaggaaagg tacacggact tccagcgaat tagccatcgt catgcggtca gctttgagaa
     8461 gaatatcgcc gcgaagccac gtatgaatat caatgtactg cattctttct acaggatgat
     8521 aattcgttgt ttctgcataa aatggatctg taatgttcgt atagtcatga ccagcttgat
     8581 attttggaag taaaatttgt ttttcttttt ccgtgaacat tttggcgttt ccgatatagc
     8641 gttcttccat cggagtggtt ccacgttcta agaaactttt accacgcata ccttctggca
     8701 taatgcgcgc cacgctattt agcattgatt taaatacgct tggcattttg ttaaacatcg
     8761 caagggaatt cggttcgtta taaatgttat aaccaccgaa aagttcatct gcaccttcac
     8821 cggacaatgc aaccgttact tgtttgcgcg cttctcttga taagaagtaa agcggaatag
     8881 cagctggatc agcaagtgga tcatccatat gccaaacaat ttttggtaat tctttcatat
     8941 attcttcagg tgagataaca taactaatgt tttctacgcc aagtttgtct gctgtttctt
     9001 ttgcgacatc gatttcactg aaaccatcgc gttcaaaacc aacagagaat gttttgattg
     9061 caggatgata ttctttagca atcgcagcaa taatcgatga atcaatacca ccagatagga
     9121 atgaaccaac tggtacatca gagcgcatat gcatttttac agaatcgtac attacgtcac
     9181 gcacttcttt aatccatgcg tcttctgatt tagttactgg tgcaaaagat gctttccaat
     9241 aagtagtaat ttccattggt tgaccaattt tcttcgtgaa ctgatgtcct ggttctaaac
     9301 gttttacatt tttagttaag gaatctggtt ctggaacgaa ttggtaagtc atatagtttt
     9361 gtaatgaaac ttcatccaat tctttttctt ttaaagcatg tagaatggat ttcttttcag
     9421 aacccatgaa caatttgcca tcttcttctg catagaaaaa tggtttaatg ccaaatgggt
     9481 cgcgtgcgcc gtaaacaagt tcttcttgtt tatcccaaat aacgaaacca aacatcccac
     9541 gaagacgttc tgctgttttt tctttgtatt tcgcatatgt agcgataatt acttcggtat
     9601 cactttcggt ttcaaatgtc attccttcag caactaattg ctcacggagt tccacatagt
     9661 tataaacttc tccattaaaa ataatccagt aacgttcatt ttcatacgtt aacggttgat
     9721 gaccgttttc tacatcaata atacttaaac ggcggaaacc aaactgcacg tgatcatctg
     9781 tgaagtatcc ttcatcatct ggcccacggt gcgtaatcat actgttcatt tgtctaaagg
     9841 tttctttatc agcgccagta atttctgtaa tgcggtcatg tacgcatcct acaaatccac
     9901 acatggtaac atttctcctc tatatagata atcattttat ctttttttca caacgtctat
     9961 catatcataa ctagactttc tttgcactgt ttaggaaaga aaaaaaccga acattcctta
    10021 caagaaatgt tcggttaagc ttattttacg attaattttt ttaaggcttc tgctttatcg
    10081 gttctttccc aaggtaaatc aagatcgcta cggccaaaat gaccaaatgc agctgtttga
    10141 cgataaattg ggcgacgcaa atcaagcata tgaattatcc cagctgggcg taaatcaaat
    10201 agctcattaa cgccatcaat taattcttgt tctgaatagt cacttgttcc atatgtgtca
    10261 atcgaaatgg aaactggacg agcaactccg atagcatacg cgacttgtac ttctactttt
    10321 ttagcaagtc ctgcagcaac gatattttta gctacatacc ttgcagcata agcgcccgat
    10381 cggtcaactt tggtcggatc tttaccggag aacgctcccc cgccgtgacg cgcataacca
    10441 ccgtatgtat ccacgataat tttacgccca gttaagcccg catcgccaag aggaccacca
    10501 ataacaaagc gaccagttgg attaataaag tatttcgtat cttcatctaa gaaagaggca
    10561 tcaatcactt ctgggaaaag gtacgtgtgc aagtcttttg cgatttgctc ttgcgtaatg
    10621 tccggatgat gttgcgtcga aacaacaatt gtatcaatcc gaactggttg attaaattca
    10681 tcgtattcca ccgttacttg tgttttcgca tcgggacgca agtagtctaa tttatttgtt
    10741 ttacgtaatt ctgttaactt acgtgctaag ccatgtgcta aaaagattgg cagtggcatt
    10801 aattcttctg tttcatctgt tgcaaaaccg aacattaatc cttggtctcc cgctccgatt
    10861 gcttcaatag ccgcatcgat ttccttacca cttcttgatt ctagtgcttc gtcgactcct
    10921 tgcgcaatat ctggggattg ttcatcaatc gctgttaaaa cggcacacgt ttctgcatcg
    10981 aaaccatatt ttgcacgtgt atagccgatt tctttaattg tatcacgcac gattttagga
    11041 atatccacat aaacagaggt ggtaatctca cctgctacta atactaaacc cgttgtcaca
    11101 gtagtctcac aagcgacacg tgcgtccgga tcttttgaaa taattgcatc taaaattgca
    11161 tcagatattt gatctgcaat tttatctgga tgtccatcag aaaccgattc tgatgtaaat
    11221 agatgacggt tcttagccaa tttattttcc tccttcaatt ctctccaaat acgtctcata
    11281 taaaaagcct ctctctattt tgcacaaaac gcgcacgaat agagaaaggc tataattata
    11341 cctttgctct catcgttcag aagataatac tcctgcaaca gattagcacc tttcacttat
    11401 atgtgtaggt tgctgggctt caaagggtca gtccctctac cgctctggat aagagataaa
    11461 ttttaattct aagatagaat accataaact ggtgccagat gcaataataa ttcggttttg
    11521 tgttatgata aaacagtcat ctatccgcta aaattagctg aaaattagcg ttcattattt
    11581 tttcacttat cattatttgt aacctgtggt atgatagatg gataaaaaag atgttttact
    11641 taactaaagg agattgtaac tatgagttta attccactat ccttgattat ttttcttgga
    11701 tttttagcag ttttatgttt atttgatttt gtttttcgtt tatattggtt taaatatttc
    11761 ctagcaacta tgggactaat tgcaagtggt gtggtatttt tcattagttt ttacggcggc
    11821 gggatgtccc aaacagaaat agctattgcc atattcatcg gttcattcgg tgaatatgtt
    11881 gtatctctta ttattagcct cgttcgtttt atttccagaa agtcaaaaaa acctaaacaa
    11941 aagaaaaaag ctaaaacagc ctaaaaagct agcgacatgt ttgtcgctag ctttttttat
    12001 ttgcgtctaa taagaacaag tgaagtggct aaaaggaaca tacctacgat aactggaata
    12061 gttgatgttg tatcacctaa tgctgggatg ctttcatttg tagcggtagt attttgcttg
    12121 gtaggattta ccgttatatt ggcgtttcta tcatttgtcc cattgctgcc gttattcgta
    12181 ttatttccac catcatctgg tgtcggtggt gtcggcggcg tcactttctc ttctactgtg
    12241 aggcttacat cgattgtctt agctttattc ccgtctgcat ctactgcatt taagtggata
    12301 gtatatgttc cttttgtttt caacatattt ggatcgaaat ctgtcgtgat tttagaacca
    12361 tcgtccgttg tagcatgaat gtcttgtaaa aattccgtta ccgttttatc tgttccaaca
    12421 ggataactaa ttttcttatc tgccgtaatg attggcgcgg tagtatcctt tacatgaata
    12481 gtaatttcta caggtgtggc ttggttccct gcggcatcaa cagcatacag atgaactaga
    12541 taatcccctg atgtgttaac aattgcaggg ttataatcgg tggttatttt ggaaccgtca
    12601 tctgtattgg cgccaattct tgcaagtagt tgttgttcgg tcattggtac accacgctcg
    12661 tttgttattt ctcggctggt tgtttttata accggagcga tagtatcttg aactagcaca
    12721 ttaattttaa gtggcaatgc tttgtttcca ctttgatccg ttgcttggag taagacttca
    12781 taatttcctg tttttgttaa atcgattttc gaaaaatcag agctgattgc gctgttgtca
    12841 cttgttgcgg cattaatatc ggtgtagaaa gcttgctctg tttttgtaat gcctctttcg
    12901 taagtgattg attggtcagc tgtgatgatg ggaggaatgt tatcttctac tttcattgtc
    12961 acttttacgg gcgttgcttt attgccactt gcatcctctg catttaatgt gactgtgtag
    13021 gtaccaaccg tatcaagatc tttactatta aaatccgttg ttattgtaga gccatcatct
    13081 gtagttgctt caatatctgc taaaaaatcc gcttcgtttt tattgatagt tctttcatag
    13141 gtgattgtat ttaatgcatt gataatcggt ccttttgtat ctaccacggt gatagtaaca
    13201 gttactggat ctgcttcgtt gttgctatca tcttttgcat ttaatacgac tttgtaagtt
    13261 ccttcttgcg taaggacagt tgggtcaaaa ttgctcgtga tggttgatcc atcattcgtc
    13321 gttgcgtgga tatctgttaa aaattgagca gcagttttgg ttgttccttt tgcgtaggtt
    13381 atcgttgtat ctgctgtgat aattggtttt tctgtatcag cgacagtgac ggtaatagtg
    13441 actggatctg ctttattgcc actttcgtct tctgcgttta gcgtcacagt ataacttccc
    13501 gctgtatcca gatttaccgc tgtatcaaaa tcacttgtaa ctggtgtgcc gtcatccgtt
    13561 ttaatagcta aatctaggaa gaatcctgtt tcttgtttct tttcgccgcg ttcatacgta
    13621 atgcttgtgg cactagatga tattacaggt ttttgcgtat cttgcacaat aacagttacc
    13681 ttgactggca aagcatagtt cccattttca tcaatagcgc ttaacgtcac ttgataagtc
    13741 cctacttgct tcaaactatt tgggttgaag ttagaagtta ctgctgagcc gtcattcgtt
    13801 gttgcattta catccgttaa aaaggcagct gcagttttcg tggttccttt ttcgtaagtg
    13861 atagttgtat ctgctgtaat aactggtggt gttgtatcac gtacggtaac tgttacggtg
    13921 attgggtcag atttattgcc acctgcatct gtcgagttaa gtgtgacatc gtaatccccc
    13981 ggtgtattta aatctactac cgttgcaaaa ttagaggtga ttgccgagcc atcgtttgta
    14041 gcagcatgca catctgttaa gaaatcagta gcagatttgg ttatgccttt ttcgtaaata
    14101 atcgcttcat ctgctgtaat tactggagca atgacatctt taactgtgac atttactgtt
    14161 cttggtattg cttggtttcc gctaatatcg tttgccttta atgtgactgc gtagactcct
    14221 ggtgtatcaa atttcacttg atccgcaaaa tcacttgtaa tcgttgctgg ttcatctgtt
    14281 gttgcatgaa tatcagccag aaattgtgct tctgttcgtg tatttccctg gttataacta
    14341 atcgcttcgt ctgcacttat aatcggtgct accgtatctt ctactgttac aatgacataa
    14401 atgggatcag attggttgcc cgctgcatcg gtagcttcca ctaaaaccgt ataatcgcct
    14461 ggcgaatcca ttctcaccat cgtatcaaaa ttggttttaa tcaccgctcc ggcttccgtt
    14521 tttacattta catcgtttaa aaattgctct tctgttttct tggtgtttat ttcatacgtg
    14581 atcttgtcgt cagctgtcac aactggcgct tgtctgtcta ctgtgaacgc tttttctgaa
    14641 gcttctgatg tatgaccaat tctgtcagcc gctgatactg acaaggtata attgccatca
    14701 ttcaatgtag agagatcaat tggaactggc gtttgaactc gaatggtagc accactctct
    14761 tccacacctt gttggataat aagtccattc gcgtctttaa ttgcccagtt gattttatac
    14821 acgcctgcgc cattaatatc atcttccgca acgacaagag cggttgttgg attgtacggt
    14881 ttcatgttta cagaaataac tttcggactt ccaacatcaa ctacagcgac acttactttc
    14941 acatctttcg ctgtatatcc actcgccggg tcaagtgatg cagtcacata ataaacacct
    15001 ggcacattcc aatcaactgg gttttcaggg tcttctgtta gtttaacgta tttaggatcg
    15061 atggacacgt tatccatggt ttctgcataa atatgaaaat gcccttcact tcgaacctct
    15121 gttaaggatg tatacttccc agctgctaga gccacactcg tcacatcgat tactgcagtt
    15181 tcatcagctg tcgaagtcat aagtgtaatt tccttactaa ttacagctgt tttcgttcct
    15241 tctgttcgct taattgaagc atctacagtt attttctcat catctactgc ggtaactaca
    15301 taagtcacat tgttagcact atctaaacca ttaaatgcat gaatagcatt tgcaggaact
    15361 acttcaccaa ctttaaaagc tccatggcta tctgcgtagc ttttctctag ttttggggtc
    15421 tcaagtgggt gaagcaattg gatatttcgt gtaccagtgg ttttatttcc actacctggc
    15481 aaatattcaa tttgataaag ttgctgttgt acgcctacag tatataaatc aaacgtattt
    15541 ttagtgatag attttgttat atctgatgaa tcaattccag agtatgcttt caccccttcc
    15601 agttcatcaa aatctgcacg acgttcccct tgataaaatg ctaaaattgg attacctgta
    15661 tcaagcactg gagctgattg caaattaaat tctgcaaaaa tcatcgctcc attcgggttc
    15721 acatcatagg tgttcgggga ctctacattt tggatatatc catcattatt taatccgtca
    15781 tagctaaaga aaccatctac tttattgccg acgccattaa taatagtggt caatgaatta
    15841 tgttgattcg ttcttaaaat ctggctatcc gttacgttca aatcatttcc aagcgctaaa
    15901 taatatccgt tatttttatt caatggctca ctgccgaaaa tgctttcttc tgcgtgtgta
    15961 ctaccaccta aaagcagacc ttttccttca ctgtaaatca cactgtttag cgttgtagag
    16021 gagttcatcg ccattttttt cgtctcaact acttgttctg acgcgatatt aacaagcgcg
    16081 atataccatg tggtgggggt tgacatgacc acaaacacat tcccatcgcc acgatcttcc
    16141 ataaatatat aaggagaaga atttgctaaa atttcaggaa cagaatcaaa taaagtaatt
    16201 tctttataat tattttctga ttcacgaata gacattttaa gttggttcgc accatttaca
    16261 tctgcgttat aagccattag acctttatta tcgattttaa gaacatcggt cctttgatat
    16321 ttggcccaga aagtgttatc taatgggtta aattcatttt tagtaatcga taatgaagct
    16381 ggttctaaag tataccgaat aaactgtttc ccttgagcag catacctagc tgaagctgac
    16441 atgattaatg tgttaccttc catttgaata tccataaaat aggcataggt tagatctgat
    16501 cttgatggaa caccgtaact aacgtatgat ttatgggcta tttgaaagtt accatttgca
    16561 tcaattgatt ttacaattaa tgtactacca ccaccagaat caccgtaata attgactact
    16621 tccccgccaa cataaaaggc agatttactc gagttggttg taatcgattt atacgaacta
    16681 aaccatttgt cagctgcata ttgtgaattg taattaccgt cctcatagtt aacaacacgt
    16741 gcccactcca ctttttttgt ggttcgatcg acacgcatta taatcccttg atcacggttt
    16801 ggaattttat ttaattgccc attttcattt aaaatggggg ttccttgtat gtactgacct
    16861 tgcactgttc caatcaaaat aatatcacca tctgaggtta attcaaaatc ctcatcaatc
    16921 gataatttcc cgttactttg atcactaatt gacatgtcta cctcaaaatt aggcaaaact
    16981 ttcccttctg cagattgaaa gcgattatcc gaaatttccg gtgaaatatc atctggagaa
    17041 atatctccca ccgattttgc ttctgctttc attccagtaa gacaaattaa tgctagcaaa
    17101 aaaatcatca tacctgtaaa aaatttactt ttcattcatc cccatctccc ttttataaac
    17161 ccccatttgt tttccccatt tcaaaagcta ttgccatttt attcccctat tttctccatg
    17221 gcaaactaat tattcaatta actgaaaagc tgttttaata acttcagctg atgcattaaa
    17281 attagccact tcatctgtag ttagtttcgg ttctaaaata tctatcacgc catttgcacc
    17341 aatgattgct ggttgtccga tgtacgtatt tgttttttcg gaaaatacag ctaatggaaa
    17401 aacttgttta gcatctgtta aaatcgcatc gacaatcccc gctgcagctg tggctattcc
    17461 aaaactcgtc cagcctttgc ccattaaaat attccaacca ccaccacgaa ctgcatcttt
    17521 taatgctggt aaatcaagtg gtgttgttgt tttataatcc gtgatgctta ccccgccaat
    17581 tttcaccgta gaccaagcaa cgaattgtga ttcaccatgc tcgccaagaa cgtatccttc
    17641 cacgctcttt ggattaatat gtaatgcttc tccaactact cgtctcattc ttgctgtatc
    17701 aagtgatgtt cccgtcccaa atactcgtga ataatcaaac ccagataatt tctgaataag
    17761 catcgtaatc acatcacatg gattcgtaat attcacaaaa atccctttaa accccgatgc
    17821 gataattttt ggtacaatct cagccactga ccgacttgtt tcaacgagct cttccatacg
    17881 atcctcgcgc agtaacgttt ctggaccaac agccatgaca atgacatcgg catcacctag
    17941 tgcgctccag tcattcgaag ttattgtagt atacgaattc gtcatcgaag ccatatcgcg
    18001 cagttctaac gcttcacttt ctgctttagt ttcgatttta tctattaaca caatttcatc
    18061 acaaatccct tgagttacga gggaaaaagc cacgtcgctc ccaacatgac cagtaccaat
    18121 tattccaacc ttccgtttca aaaaatcccc tccacaatta attacttgaa tttaatgcga
    18181 ttaattcata tttaatgata gttttattat tttcccacac gagttttcga gggattgctt
    18241 ctccaagtgt ttcgccttct tttgttttac gtactgcgat tggcacatca attggataaa
    18301 tccgataacc taatttttct agttcaaaga aattatcaga aattcgcttt tcttttcctt
    18361 ttgttacaat cattgtgttt acctctagtg gcatacccaa ttttcccacc tccagtttct
    18421 ttaatcatag cagagattgc ccctatttga ctagttttta tcatttaaga ttcgctcagc
    18481 ttgttgcaca atttggacca ttcccgcatc tcgcataaaa aagctaaaag ccggttgtaa
    18541 aatgaatcga cttaactccc cttgaatgat gacagggcct tttgtttcaa ggtaatcatc
    18601 tagtgattca atggaaataa catccgccgc ataaactcgt ttagtaaacg ttcgttcctc
    18661 tgattcgacc aaataatcag ctacaaaatg aagttcatca ctaattgcgc ccgtctcttc
    18721 catgagctcg cgtttcgctg cgtctaaatt tgtttctcct ggttcacctt ttccaccagg
    18781 gaattcaagc ccacgaattt tgtgttcggt aaaaagccaa ccgtcctctg ttttaggtat
    18841 aatgagcaca tcgtctggat tattttcctg tgcttcaaaa tagattgtaa ctttgtttcc
    18901 aagtgtatca ttataaataa acaaaaactc acttcctttt cttttttcaa aaatgtggta
    18961 agctgtatgt aagctgaaat ttagagggtg aaaatcaatg aaaaaaattc ttatcggagg
    19021 aatccgactt tatcaaaaat atatttcgcg tttcactccg gctacttgtc gtttttatcc
    19081 aacttgttct gcctatggaa tcgaagcgat acagacacat ggcgctttaa aaggtagtta
    19141 ccttgcgatt agacgtattt ctaaatgcca cccgtttcat aaaggcggac tagattttgt
    19201 gccacccaaa aaagagaaga atgctgattc cgagcattcc tgtaaagctc accatcacca
    19261 ttaatcatat catgaatcgg tttttgccgg ttcatttttt tcttgctttt taagacagaa
    19321 taaggtatta tcaaattcgg actataaatc gtaattgcta cgattcgtat attatttaaa
    19381 caagaattat ttcgatttag aggagtgaaa agattgagaa aaaagtatct tattgcctta
    19441 actgtactat tttcagcatt actcatactt actggctgct cagatgagag cgataaaaaa
    19501 gcgacaaaga gtgatcaatt aacagtttat acaaccgttt accctttgca gtatttaaca
    19561 gaacaaatcg gcggtgagta tgtagatgtt catagcattt acccaccagg ttctgacgcc
    19621 catagcttcg aacccaccca aaaagatatg atgaaaattg ccgatagtga tttattcttc
    19681 tatatcggac tgggtatgga aggatttgtg gacaaagcgg aaaaaacact cgcgaatgaa
    19741 catgtctctt tcgtccctac cgctgaaaaa ttagacttgc caaaagatcc agatgccgca
    19801 gaagaacatg accacgaaag cgaagaagaa cacgaacatg gcgacattaa cccgcacgta
    19861 tggttaaatc ctgtatacat ggaacaaatg gcaacagttg taaaagataa attaatcaaa
    19921 gaaatgcccg atcaaaaaga aactttcgaa aaaaattacc aggctgtcga aaaaaaattg
    19981 aaaaagctag atcaagattt ccgcacagtt acaaaggaag caaaacaaaa agacttcgtg
    20041 acagcacatg cagcctatag ctactgggaa acagaatatg gtctgcacca aattcctatt
    20101 gccggtgtat caacaagtga tgaaccttct caaaagaaat taaaatctat cgttgaaaaa
    20161 atcgaagcag agaaaatccc atatattatg ttagaacaaa acactaactc aaaaatagca
    20221 gatgttattc aacaagaaac aaatacaaaa acactgacac tccacaattt agaaacactt
    20281 acgcaaaaag acttagatca aaaacgtgat tatctttcca ttatgaacga taatttaaaa
    20341 gcattaaaag aaggtcttaa ttattaaaaa gaaaggcgct ctgtttacat agagtgcctt
    20401 tcttttaatt tattgcgttg aatttttcca gatgctgttt taggtagctt ttcgacaatc
    20461 gttatttgtt tagggatttt ataaccagcc aaatttgttt cacagataag ccgtaattca
    20521 gcttcatcaa atgtttcttc tgcaacgata aaagcgacgg gaacactacc ccatttatcg
    20581 tcaggcttac cgataacagc cacttctttc acgccctcat actcggaaat gacatgttct
    20641 atttcagtag gataaatgtt ctctcctccc gaaataatca aatcagaacg acgctctaac
    20701 acaaataaaa agccttcttc atccaaatag ccaatatcac cagttttgaa ccaaccatcc
    20761 acaaacgaag cttctgtcgc ttttttatta tgtaaatatc caggtgtaat cgatggtcct
    20821 tttagtaaaa tttctccgtc atccgcaatt ttcacttctg ctggaaataa cgctttacct
    20881 gaagaaccaa ttttatttaa ggcatctttt ggtggtaaag taacgatttg tgaagctgtt
    20941 tctgtcatcc cgaatgactg cactaaggga atatcacgct gtttgcaaat ttccaaaaca
    21001 gctttactag caggcccgcc gcccagtaaa acggttcgaa cattgggatg ataacttccg
    21061 ctgtgtattt tcaacaagcg ttccagcata gaagtcacga ccgaaatcgt agaaatttta
    21121 ccactttcaa gcaattgcgt aattttttct tcatcgaaat gctcttccaa atatacggga
    21181 attccgtaaa taaccgaacg catcataatc gataaaccac taatatgaaa aatcggcaca
    21241 gcacagagcc agctatcttt ctcggttaaa cctaaattca gcaccgaagc aacagcactc
    21301 caccagtgat tttcgtaagt ttgcacaaca ccttttggtt tccctgttgt ccctgatgta
    21361 tacataacag aagccgcgcg agataagtcc catgtttcta acaacgctgg cgcttcataa
    21421 tccgtttctg ccaaagtagc ataactaatt ccagtggcta ccttatctac taacgaatcc
    21481 gctacaatca catgttttac ctcagcgttc gcgagttgaa acgatatctc ttttttcgtc
    21541 aaacgattat tcagaaataa agtgaccgca ccaagttgtt gcagagcatg aatgagtaaa
    21601 aaagtcatcc gatcattttt ccctagcaaa gcaaccatct cgtcttttct aatccctaac
    21661 gcgaataact tacccgcaag ttgttttact gcttcactta tttcttcaaa tgtttcttct
    21721 tttccttcaa aaacgagtgc ggtctcttta ggagaaagcc gcactcgttt ttgaagccag
    21781 tttgtcatgt ccatttttac accttcaaat caagggaatt ttggaaattg gtcaaagtct
    21841 ggatcacgtt tttctttaaa ggcatcgcga ccttctttgg cttcatcggt tgtgtaatat
    21901 agaagtgttg cgtcaccagc taattgctga atacccgcta aaccatctgt atctgcattg
    21961 aaagctgctt tgatgaaacg caaggcagtt ggactttttt gtagcatttc ttttgcccaa
    22021 gctactgttt ctttttctaa atctgctact ggaacaacag tgttaatcca gcccatttct
    22081 agcgcttcgt ccgctgtata ttgacggcac ataaaccaaa cttctttcgc tttcttatgt
    22141 ccaataacac gtgctaaata gccagaacca taaccagcat caaagctacc aacattcggt
    22201 cctgtttgac caaattttgc attatctgct gcaattgtta agtcacatac caattgaaga
    22261 acattacctc caccaatgga ccagcccgca accatcgcaa taactggctt tggaataaca
    22321 cgaattaaac gttgtaaatc aagaacattc aaacgtggga tttggtcatc gccaacatac
    22381 ccaccatgac cgcgaacttt ttggtctccg ccagaacaga aagctttttc gccttcccct
    22441 gttaaaataa tcacgccaag attcgaatta tcacgcgcta agttaaatgc atcaatcatc
    22501 tctgttactg tttttggtgt aaatgcatta tgtacttctg gacgattaat cgtaattttc
    22561 gcgattcctt cgtaactttc atatttgatt tcctcatata ctttttctgt ttgccaatta
    22621 aaactcattt ttcttcctcc ttcaaaatat cttccagcca gtaattaagc tgacttgaaa
    22681 agctgtttgg ttgttctaaa taaactgcat gccccgcttc ttgaattgaa acatgcgtac
    22741 tatttggtaa aagttgatgc atttcctgcg cgattttttc aaacttctca tctaaagcac
    22801 cggtaatgag tagcactgga aaagtaaagt tcgctaaaca gttccagtaa gatggttgtt
    22861 ttccggtccc catcccacgt agactcattg ctaaaccatg cgagttttgc gatagccgtt
    22921 ctgacctaat tcttcttttc atttcaggag acaaaacttt ttgtgaagca aacaaagcta
    22981 aattttccca gtagtccaca aaaggcacca agccctcttc ttcaatccag tctgccaaac
    23041 gattatcagc cgcaacacgg ctttctcgga tatctgcttg ttcaaggcca ggagagctac
    23101 taactaaaat aagtccacgc accctttttg gaaaggttgc tgcaaacgca gtcgcgaccc
    23161 gcccgcccat cgaatagcca agtacaaaac atctactgat atttaattga tgtaaaattc
    23221 cagctaaatc ctcgcaaata ttttccatag tgtaaggcga tatttcttct gggcttgcgg
    23281 tatttccgtg cccaagtaaa tctggcgcaa taatattaaa atgttctttc aaacctgaaa
    23341 tactatcttg aaatgtttcg cttgttccag taaaaccatg taacatcagt aaagctggct
    23401 tttctccact tatagcagtt gtcagatgat aatgtcgacc gtttactagc atattaatct
    23461 aatgccttta acgcgtccgc aattttaacc caaagtgctt gatgatttgc tttattttca
    23521 tgacgatttg ttttcacttc aataatatcc aaacctttat ggtagctagc tttatcgatt
    23581 gcttcttcta gttcatctac cgacttagcc tcgtgataat ctgcatcata aaaagcagct
    23641 gcaaaacgga aatcaagttc agtagatgta ccaaataatg attcaaaata cttcggctcg
    23701 tttgcttgag gtaagaacga gaatatcccg ccgccatcat tattaacaat cacaatcgtt
    23761 aggttcatct tatatttttt cgccataagt aacccgttca tatcatgata aaaggataaa
    23821 tcaccaatta gtaaaaacat tggttggaag acaacactag cacctaacgc cgaagaaaca
    23881 actccgtcaa taccattagc cccgcgattt gctagcattt ttattttctt atcaatttgt
    23941 gaaaagtacg tgtcaacatc gcgaatcggc atactattac caataaagag tcccgctttg
    24001 tccggtaaca aacggcgtaa ttccgcaact atcttacctt cttccaaaat ggttgtgttc
    24061 gccatttcag ccaaaacgat ttctcgtgcc actttattat acgatgtcca tccatttaac
    24121 cacgctgcat ctttcgcatc atcaggcata ttttgttgca tgatatctag taaaaatcgt
    24181 tcatcacagt gaatcatgtc tgttaccgct ttaatcggat ctttccaagc agcacccgga
    24241 tccaccacat aaaaacgaat atctgaaagt tgttctaacc agtttttcag tggtttagaa
    24301 actggcatac ttccaaaacg aataactact tctggtgtta atttatccat aatctctgct
    24361 tcttttaaga atgcatcata ttggtcaatc actacttcat ctagcgcccc gtaagaacgg
    24421 agtccagaaa gcggatcagc taaaatcggc caacctagtt ttttcgctaa atcaaccatt
    24481 ggctgctcca attctttctt atcgattgga ccaacgacga atacgccttt tttaccagtg
    24541 cattctgtca ccattttttg aatcgagcta tcgtccaata cttcatgcgt ataataaata
    24601 tgtacgtgat gatgtttttt tccggtagct gtgaacggtg aaggttctag aattggcaca
    24661 agcggttcgc gtaatgggaa attgaggtgc acagggccac gtggagtttt cattgcaata
    24721 tccaccgcgc gacttccatg ccattttgca tagcgaagca tttcttcact gttttcagga
    24781 agtgccatat ccgtaaaatc cttgacatgt gaaccatata aatgcaactg atccatcgct
    24841 tgtggtgctc caacatttcg aagctcatgt ggacgatcag cagttaaaac aatcaatggg
    24901 atttgtgata aattagcttc agcaactgct ggaaaatagt ttgcagctgc cgttcctgaa
    24961 gtacaaagta aaacaactgg acgtttcgat gcctttgcta gacctaaagc aaaaaagcca
    25021 gccgagcgtt cgtcaacatc cacataaatc ttcaaaatcg gatgctctgc catcatcagt
    25081 gcaagcggag tggaacgtga acccgggcta ataattgctt ctttcacacc ggcttgcaca
    25141 agctcctcaa taaatgcagc taaataatct gtcagcactt gttcgtggtt tgtcatttct
    25201 ttatgcctcc taatacgcgt aacatcggct ggaattttac tgccgtttct tgtaattctt
    25261 cttttggtac agaatctcca acaatcccgc aaccagcata gattaacccc tgcgaatcga
    25321 caattaagcc tgaacgaatg gccacagcaa actcaccaga accttttaag tcaacccagc
    25381 caatcggtgc tccgtagaaa ccacgatcca tttcttcttt catccgaata atggctaatc
    25441 ccattttttg aggtaaaccg ccaagagctg gcgttggatg aagagctttt accatttcaa
    25501 gcatggaaac atctggtttt ttcttcgcgg taatattcat atatagatgt tgaatatcac
    25561 gatttttcag aagtactggt tggctagata acgacaatcc tgttgtaaat ggttttaatg
    25621 tttcttccat catttgcact acataagaat gctctcgcaa gtttttcgca tcttttaaca
    25681 gcgcatttcc aagtgcttcg tccgcttctt cggtagcgcc gcgctccgta gaaccagcta
    25741 cacatgacga atgaatttca tccccattga ccgcaagtaa tctttcagga gttgccccga
    25801 aaaagacccc tgttcccttt tcaataagga agaaataact attttcttgt gttgctagca
    25861 tattttccaa aataatggca ctatctactt ggcgctggaa acgcaagccc attcgtctag
    25921 ctagaaccac tttttttaca tcttctgaat gattaatcat atcgataatt tcactcgcag
    25981 tttctaggaa atggtctttg ccaatctcct taaaatctgt aagtaatgcc atttcagctt
    26041 cattaacctc ttgatgaatg attttttgcc attgattaaa aacagcttct aatttgcttt
    26101 ccgtatcatc agagtagata gacaaattaa cggttaagta acttttacca tctttattcg
    26161 ttaacataaa tagtggtaaa taaaacaagc catctttaaa actttgccat tctttctctg
    26221 tatcacgctc aggatcaaag gcaaaaccac caaagtaaat tggtccagta gcatctacgg
    26281 ttgcattggt tacactagtt cgcagtctct tctcaatttt ctcttgcagt ccaagaaaag
    26341 catctttttt cttctccgcc aaaaattgtt tcgttacacc aaaaccggtc atggtcagtg
    26401 tcatttctgg attttgccag aaaaaacgct cacctttaaa agccgtgcca gcttttttaa
    26461 acaatttgac tggagacact aattcatcta actcagttac ccagctaaat agagccggtt
    26521 gatcttggct tgcgctacgt ttcgcttgat taaataaatc aagaggcaat ttagtattca
    26581 tatgcttatc tctcctttta cattcacatc ttctattata ccaaaaatag agctaaactg
    26641 cttggtttgc gttttttctt tcatttcgtt attaattatt gacgttcttg caatatttcc
    26701 ctaaaatgaa gggtagacat ctgaaacata tggaagtgaa aaaggagaga aaaacatggc
    26761 taatgcctca aaatctgcac ttacaaaaca aactggattt caaaaatggt ggacattact
    26821 tcgcccccat acacttgtag cctctttcgt tccagtattt cttggaacat cagtcgcaat
    26881 gagctacacc agttttcatt ttacacgttt tatcgttatg ctaattgctt gtttctttat
    26941 acaaacatcc gccaatctat tcaatgaata ttttgattat aaaaaagggc aagatgatga
    27001 gcactcggta ggaaatggtg gtgctatcgt ccgaaatggt atgcgcccag gatttatttt
    27061 attcctagca attttcttat acatattatc aattctcggt ggtgtttatt tatccattga
    27121 acttaattgg tatgtaggat tacttggcgc aatatgtatg cttgttggct ttctttatac
    27181 gggaggacct tatcctattg cttatacgcc atttggtgaa attatggcag gattctttat
    27241 ggggggaatt attactttca tttccttcta tattcaagca gaatttatta gttcgtttat
    27301 cgtatacgta tcgattccag taatggtgct cgttggtaac ttgctacttg ctaatagtat
    27361 tcgtgattta gtacctgata agaaaaatgg tcgtttaacc ttagctatct tgctaggtcg
    27421 caaatgggca accgttcttt ttgcagctgc ttttctattc agttacgtat ttgaaatcgc
    27481 ccttattttc acacaagatg ctccgtggtg gacgcttctg attttactta gtttgccaga
    27541 agctattcgc gccgtgcgtc gtttcatcgg caaaacttcg ccgattacaa tggtcccagc
    27601 catgaaatcc acatctaaag cattaactat ctttggtatt acattggccc ttgcttacct
    27661 tttaagtcta ttatccagaa atttattcat gtaaaaaaac tggttgtcct cgtgacaacc
    27721 agttttttta tttagaccca atttggactt gctgtttatt ttgggcatat ttcgctaatt
    27781 ctatcgataa atcatatcgt aaaaatggcg taataatata aatcccttgg aaatgctcac
    27841 aaatcgcatc cactaattca cgagcaattg ccatgccttc ttcatttgca tgaccgtgct
    27901 cttccgcctc tctcattcgc tcccgcacat catctgtcaa acgaatcccg ggaacctcat
    27961 tatgcagaaa ttccgcattc cgactagaca ataatggcat aaccccaata aaaagtggca
    28021 catcaatatt tgctttttgc aaggcttctt ttaataagat agctttattc acatcataaa
    28081 ttggctgtgt aataatataa tcggcaccat attccacttt tcgctcaatt aacctaaccg
    28141 ctttctctaa gttcagcaca ttcggattaa atgccgctcc aacatggaat cgtgcctttt
    28201 ctttcagtga tttcccagta taagaaatcc catcattgaa ctttttaatt agctgaacta
    28261 attccacaga ccttaaatca aacaccgaag acgctccagg gaaatcacct actttagttg
    28321 gatcacctgt aatcgcaagc acatcatgca gccccaattt atgaaatccc atcacatgcg
    28381 aatgcatccc aaccaaatta tgatcccgcg tcgtcaaatg aatgagtggt ttaataccat
    28441 attcatgctt caaaatcgaa gctagcgcca tattactaat ccgcggcgtg gcaagcgaat
    28501 tatccgaaat cgtaatcgca tcaacgcctg cctcgtcaag tgcctgggct ccttcaaaaa
    28561 atttcgtcgt atcaaaagtc ctcggcggat ctagttcaac caaaatcgtt aaacgttcct
    28621 tcactttatc aagcaaacgt tcaccagaat ccacatcctc cacttcttct ggaacaagtt
    28681 ccaatatcgg ccgaacttct ttttccaaaa tgggttttgt tgtttcaagg ccttttcgta
    28741 aagcacgaat atgatctggc gtcgtgccac aacaaccacc aataatccga gcaccttctt
    28801 gccgaaaaac ctccccataa tgttcaaaat aatccgtgtc agactgataa atcacttttc
    28861 cttcttgcat ctctggcaaa ctagcattgg gataaactgc caaataagca ttatcataca
    28921 acggcactgt ttcaagagca cgcgccatat ggtaaggacc aagtcggcaa ttaataccaa
    28981 ctacatccgc tccaagcgca ataagttctt ccagcgcatc cggcaatttt ttcccgtttt
    29041 gaagaatacc cggctcatgc atagagacat tcgcaactac cggtaaatca gtagtctcac
    29101 gaagaatttt caacactgtt ttaagctcat ctaaatcata atacgtttcc agcaaaatcg
    29161 catccacacc atctaacaaa aaacagtata gctgctccct aaaacttcgc ttgatttctt
    29221 cgagtggagc cgctggaagt cttgcatcca ctgcgccatt tattccacca atcgtcccaa
    29281 aaatatacgt tccagtccct cttgccgctt cctttgctaa ccgaatggct gcttgattaa
    29341 tacgcttcac ttcatcttct aaaccatatc gcgctaattt aatataattt gcaccatacg
    29401 tattcgtttg aataatatcc gccccagcac caatatatgc tttatgaata gcaacaatat
    29461 cttccggatg agacaaattt agctcttcaa acgaacgatc cactccataa gaataaagca
    29521 aagtgcccat cgcgccgtca gcaattaata ctttttcact taaatctttt cttaaattca
    29581 tttcgcaaca cttcccttct taatgaaaga aagtgcttgt tttaaatcag caatcaagtc
    29641 atcggcatct tctagtccag ctgaaaaacg taataatcct ggcgtaattc cttgcgccaa
    29701 acgctcctct tccggaacag ccgcatgaga cattttagcc gggtaagaaa gaatactctc
    29761 caccgcgccc aaactcacag aaaataccgg caattccaaa tgtgttacta gttctcgcac
    29821 agcttcctca ctgcctaaat caaacgataa aacggccccg ccacttgtcg cctgttccac
    29881 ttgaatgtca taacccgcat gagaaggtaa ccccggataa tgcactgcca ccacatctgg
    29941 ctccgcattt aaaaatagcg caattttctc cgctgtttcc gtcccagcct tcatccgcac
    30001 agaaagtgtt tttagtccgc gcaataacaa ccacgaatcc tgcactccaa gaaccccacc
    30061 agtcgaattt tgcaaaaagt acactgcttc agccagatta ggattattgg tgacaattag
    30121 ccccgccaaa atatcactat gccctccaag aaatttcgtc gcactatgaa taaccaagtc
    30181 tgcacctaat tctaacggtt tttgaattaa cggcgtcaaa aatgtattat caacaaacgt
    30241 ataacaccca ttcgctttcg caagttttgc aacagtccga atatctgtca catgcagcaa
    30301 cggattagaa ggtgtttcca agtaaaccag tttcgtattc gcttgaaatg ccttcgcaac
    30361 ttcgtcaata tttgtcgtat caacaaaagt atgcgtaatc ccaaaacgcg gcaacacttg
    30421 ctccacaaaa cgaaacgtcc cgccgtacac atctttcgca atgataaaat ggtctccctt
    30481 agaaagagta aagagcgctg cagaaacagc cgccatccca ctagcaaagg caaaaccatt
    30541 cgtaccacct tccagttccg caatcgcttg ttccactttt tctctcgttg ggttcccact
    30601 tctcgcataa tcataagcgt gataattatc aaagtcatgc tgatggaaag tagacgataa
    30661 atgaattggc gtattaagcg cacctgtctc tttatcaatc ccgaggctcg ctttaatcac
    30721 agccgtatct tgcgcatatt cattagccac gagcgctcac cccttccaaa accgcatcga
    30781 gtgccttaga taaatcagca atcaaatctt cactagcttc aattccaacc gaaatgcgca
    30841 ataatttgtc tgtaagtcca taagaattcc gcaactcttc aggaatatct gcgtgcgttt
    30901 gtgttgttgg ataagtaatc aaactctcca ccccgcctaa actttccgca aaagtaaata
    30961 actcaagttc tttcaaaagt ggcgatacga gcgccgcatc ttgaataaag aaactaatca
    31021 tcccaccgcg ccctggataa cgaacttcct ccaccaattc atgtgattcc aaaaacgccg
    31081 cgattttctc tgcattcgct tgatgttgtc ttacacgcaa aaccagcgtc ttaaggccac
    31141 gaatcaataa ccaactatca aatggcgata gcactgcacc cgtcgcattt aactgattaa
    31201 aaaagaaatt cccaagtcgc tcctctttta caataaccgc cccagcaagc acatcattat
    31261 gcccaccaag atacttcgtc gcactatgaa tcacaatatc cgcgcccaaa gttaacggct
    31321 gttgtaaaat tggtgtataa aatgtattat ccacaatcac aagtaaatca tgcgcacctg
    31381 cccattcaga cacagccgca atatctgttt cctgcattaa aggatttgtt ggtgtctcaa
    31441 taaaaatcgc cttcgtttcc ggacgaacta atttctccaa atcagcaatc tccgccccgt
    31501 cccaatacga aaatccaata ttatattgcg caccaaactg ttcaaaatat ctaaaagtcc
    31561 ccccgtacaa atcctgtgaa ctaataatat gttcgccagt tttaaaaagc tggaaaacaa
    31621 gttgaatcgc actcatccct gaactcgttg caaaagcatg cgttccattt tctagttccg
    31681 cgagcgcttc ctgtaaagca tctcgcgtcg gatttccagt tctagtataa tcataccccg
    31741 ttgacactcc aagatcggca tgctggtaag ctgtagagaa gtagactggc atattgacag
    31801 cacccgttct ttcacatttt ctatttccaa tttgcgctgc tatcgtctct tgtttcagct
    31861 ttgccataat tacctctcct ccattccttt atttctctaa tacttgatat tccgcacgaa
    31921 cttctttagt cgctttaatc atatcttgaa gtgccgcaat cgtttcaggc tctttacgcg
    31981 ttttcaaccc acaatctggg ttaatccaaa attgttttgc atcaattgca cgtaacgctc
    32041 ggcgaatatt gtcttggatt tcagtcacag tcggaacgcg tggactatga atatcataaa
    32101 ccccaagacc aatttcctta tcatacgtca cttcctcaaa tgtcgaaatt atctccccgt
    32161 gacttcttga cgtttcaatc gaaataacat ccgcatctag agcactaatc gtatcaataa
    32221 tatcgtcaaa gtccgaataa cacatatgcg tatgaatttg cgtatcattt tggaccgaag
    32281 cagtcgttaa tttaaacgaa taaactgcat catctaaata tttttgccat cttgcttgtt
    32341 ttaatggtaa accttcacgt aaagctggct catccacttg gataacttta atgccattac
    32401 gttctaacgc ttctacttct ttacgaagcg caagtccaac ctgatttgca actacactct
    32461 ccggcacatc atcacgaaca aaactccaat taataattgt caccggcgcc gttagcattc
    32521 ccttcactgg gcgcttcgtt aacgactggg catagacact ttctttcacg gtaatttcct
    32581 ctgtaaaagc aacatccccg tagataagtg gtggacgaac cgctctcgaa ccataagact
    32641 gtacccatcc aaatttagtt gcttggaaac cagccaattt ttgcccgaaa tattccacca
    32701 tatctgtccg ttcaaattcc ccgtgaacta atacatcaat atccaaatcc tcttgaattt
    32761 taatccagcg agccgtttct ttttcaataa aagcattata ttctgcatcg gttatgttcc
    32821 cttttaacca gtcagcgcgc gtcttccgaa cttccggtga ttgtggaaaa cttccgattg
    32881 ttgtcgttgg gaaaagcggt aatttcaacc aagcatgttg caacttaatc cgttccgcaa
    32941 atggcaactc ccggtccacc cgcacatttt tcaaattagc aatcgcttct tgaacttcta
    33001 aattatttcg atgactagat tcattgagcg ccgtcactgc tgcacgagat tcttctagtt
    33061 cagctgccac actttccgca ccattcgtca aagccttcgt caaaatagta atctcctcta
    33121 atttttgatc agcaaatgat aagccaccaa gaatcacttc atccaaatct ggctcactta
    33181 acttcgtcac cggtacatgg agcaatgaat tagaaggttg aacaatcaat tttccatccg
    33241 ccacataatt cgcaatctcc gtaagtagtt ccagtttagc atccaagtca ctacgccaaa
    33301 cattccgtcc atccaccaca ccggccgcta aatacttatc ttccggaaat ccgtgagctt
    33361 ttaacgcttt tatcgaatca ccatgatcat gaacaaagtc aatcccaatc gccgcaactg
    33421 gtaaattaac aacctcttca taataatcca aactttcaaa ataagtttgt aactctattt
    33481 tcaaatttgg aactgccgtt tgaaacgctt gatatacttt ttcaaataac gcaatttctt
    33541 ttttatcaaa actagttgca agatatggct cgtcaatttg cacccacttg gcaccagctg
    33601 cctcaagttc tttcaaaatc tctacatacg ccggaataaa tttatctaac aatacttcaa
    33661 aactttttgc atcgctacct tttccaagtt ttaaataagt aattggccca acaagcactg
    33721 gttttccttc aataccaagc tctttcttcg cttcttcgta atagtatagt gcccgattat
    33781 ccaacacttt cggctccgca tcagcgagtt ctggaacaat atagtgatag ttcgtattaa
    33841 accatttagt catttcagag gccaccgcgt catttttacc acgtgcaata tcaaaatatg
    33901 tatttagcga aactttccct ccatcatgct gaaaacgttt tggaataatc ccaaatgtaa
    33961 cactcgtatc aagcacttga tcataaaaac taaagtcacc aactggaatc aaatcaatcc
    34021 ctttatcttg ttgttttttt agcgcatgta atcttagaat ctttgtttcc gccaataatt
    34081 ccttttctga aattgtgcca ttccaaaact tttctagtgc acgtttccat tcacgtttct
    34141 ctccaagtct cggatacccc aagtttgaac taattgcctt taccatactt atcaccttat
    34201 cctctccatt ttttgccaat aaaaaacctc cctagagaac tagagaggtt tggaagtttc
    34261 gatacacaaa tacagtgaaa ctttttaagt ctctcttatc tctcgaagca tcacacttcg
    34321 caggatttag caccttttca acgaattgaa aggttgctgg gtttcaacgg gccagtccct
    34381 ctaccactca taataagagt aatttattta gtttttttaa tcacttaaat tggattgaaa
    34441 tcatcatacc acttgcacct aaaaactgtc aatcattaat ttcccatttt cttttcaagt
    34501 gcatctttcc tagctccaaa tactagcaac aaacagccaa gcacaaggat tccggctact
    34561 acaaaataaa atatttgatt tccaaaaatc ccgatcatca ttccagtcgc gctcggccca
    34621 ataatgctcc ccaaactgaa gcacatgcca accaaaatat tcccagccgg aagcaattca
    34681 agtggcgtta aatccgtcat ataagataat ccaagcgagt ataaagatcc aagtaaaatc
    34741 cccaaaacaa agaagaaaac cacatataaa actggtatct taacaaatgc tgtcaacata
    34801 aaaacaactg ctcctgctcc cgtcaaaaga ggtaaaactt ttcctcgtcc aaacttatca
    34861 ctaacaatcc caataggcac ctgaaaaata atcgtcccta ccgaaaaaga agaaataacc
    34921 atcgctatca tcatcgtatc gagcccatcg cgcaacccaa caaccggaaa agtcgcatta
    34981 agtccagtct ccaaaattcc atataaaaac ggtggaatca tcgctaccca agccaattta
    35041 aatacatccg aaaaacgttt caaactaccc caaaaagata tttttcgaat tacagccttt
    35101 tcagcaacaa agtcattacg aacaaaccaa acgagtcccc aagctatcaa aactaaaatt
    35161 ccagataaaa agaaaggcaa gttcgcattt atttttgcca aattaaccaa ttgtggccca
    35221 atcgcaaatc ctaatgagaa aaacaaccca taaatagcca tattccggcc acgtttactt
    35281 ggatcactca tcgccccaat ccaagtctgc gaagaaaaat gtaacatatg atcccccaca
    35341 ccaataagca accttaatat aaaccaaaaa tataaattaa accaaattgg aaaagccaaa
    35401 atcgaaaccg caactagtcc tcccccaact aaaataatcg gcttataacc atatttatga
    35461 agtggggcct caataaatgg agaaataagt aaaactccta aatagattcc cgtagcatga
    35521 aacccattaa ttcctgcact tatacctttc tcttctaata ttatcgcaat aagaggtaat
    35581 aaaaccccct gtgacaatcc tgaaatggca acaaccatcg tcaaaatcca aaacttccct
    35641 ttagccccca ttagatacct ccaaaacttt actaaataaa aaaacaatgt cacaaattga
    35701 cattgttctt taggatgacc cgtacgggat tcgaacccgt gttaccgccg tgaaagggcg
    35761 gtgtcttaac cgcttgacca acgggccata tctggcggag aaggagggat ttgaaccctc
    35821 gcgccgcgcg agcgacctac acccttagca ggggcgcctc ttcagccact tgagtacttc
    35881 cccagatata aaaaacttat tcttattgaa agaataactc cacaggcagg actcgaacct
    35941 gcgaccgatc ggttaacagc cgattgctct accaactgag ctactgtgga ataaaatggg
    36001 cctaaatgga ctcgaaccat cgacctcacg cttatcaggc gtgcgctcta accagctgag
    36061 ctataggccc cagtaaaact atattcatgg taaaaagcgg gtgatgggaa tcgaacccac
    36121 gacaacagct tggaaggctg tagttttacc actaaactac acccgcataa tataattttt
    36181 aaaaacaaag ggcggataat gggaatcgaa cccacgaatg cctgaaccac aatcaggtgc
    36241 gttaaccact tcgccatatc cgccataagg caaaaatgtt taaaaaaaga atggcttggg
    36301 acagaatcga actgccgaca ccttgagctt caatcaagtg ctctaccaac tgagctacca
    36361 agccataatg gcggtcccga cgggatttga acccgcgatc tcctgcgtga caggcaggca
    36421 tgttaacccc tacaccacgg aaccactatt gcgggggcag gatttgaacc tacgaccttc
    36481 gggttatgag cccgacgagc taccagactg ctccaccccg cgacaataat attaaatttt
    36541 agtccacata tcacaagtga aaaacggagg aagagggatt cgaacccccg cgcggtatta
    36601 cccgcctgtc ggttttcaag accgatccct tcagccagac ttgggtattc ctccatgata
    36661 ataataaagt gacaagtgga ccttgcagga ctcgaacctg cgaccggacg gttatgagcc
    36721 gtctgctcta accaactgag ctaaaggtcc aagattgaaa atagcggcgg agggagtcga
    36781 acccacgacc tttcgggtat gaaccgaatg ctctagccag ctgagctaca ccgccataat
    36841 aataaggcaa ctattttcta cttaaatgtg aagcaagtgg agcctagcgg gatcgaaccg
    36901 ctgacctcct gcgtgcaaag caggcgctct cccagctgag ctaaggcccc ataataataa
    36961 gggattaaac tatcgggaag acaggattcg aacctgcgac cccttggtcc caaaccaagt
    37021 gctctaccaa gctgagctac ttcccgttta ataaagtgcg cccaagagga gtcgaacctc
    37081 taaccgcttg attcgtagtc aagtactcta tccagttgag ctatgggcgc aaataaaagt
    37141 gccgaggacc ggaatcgaac cggtacggat atcactatcc gcaggatttt aagtcctgtg
    37201 cgtctgccag ttccgccacc ccggcgttgc tataaaatat ggagcggaag acggggttcg
    37261 aacccgcgac ccccaccttg gcaaggtgat gttctaccac tgaactactt ccgcatattc
    37321 cataataagt gcgggtgaag ggacttgaac ccccacgcct cgcggcgcca gatcctaaat
    37381 ctggtgcgtc tgccaattcc gccacacccg caaaagtgag ccgtgctggg ttcgaaccag
    37441 cgaccctctg attaaaagtc agatgctcta ccaactgagc taacggctct ctacaataaa
    37501 aatatgtatt atcataaagt taatattaat ggtgccggct gcaagagtcg aactcgcgac
    37561 ctactgatta caaatcagtt gctctaccaa ctgagctaag ccggcataaa aaatggaggt
    37621 taacgggatc gaaccgctga ccctctgctt gtaaggcaga tgctctccca gctgagctaa
    37681 acctccagaa ata
//
LOCUS       DASDYK010000012        36690 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.012, whole genome shotgun sequence.
ACCESSION   DASDYK010000012 DASDYK010000000
VERSION     DASDYK010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 36690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36690
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.012"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(20..1093)
                     /locus_tag="U0308_000687"
     CDS             complement(20..1093)
                     /locus_tag="U0308_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family protein"
                     /protein_id="HEM2315676.1"
                     /translation="MKKRTFALALSMIIASGVILGACGSSSDDKKSSDDKSSKDFTVA
                     MVTDTGGVDDRSFNQSAWEGLQKFGKANDMEKGTDGYNYLQSASEADYKTNLNTAVRS
                     DYDLIYGIGYKLKDAIEEVSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVV
                     AGLTTKTNKVGFVGGVKGTVIDRFEAGFTAGVKAVNPNAQIDVQYANDFAKADKGQQI
                     ASSMYSSGVDVIFHAAGGTGNGVFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTAND
                     GKDYNVTLTSEIKRVDIAVEDLATRAKAGDFPGGTKIEYGLDKDAVGLSEHQDNISKD
                     VLAKVEEYKQKIVDGDIKVPEKP"
     gene            1446..2285
                     /locus_tag="U0308_000688"
     CDS             1446..2285
                     /locus_tag="U0308_000688"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEM2315677.1"
                     /translation="MAKIGFIGFGSMASLIATKIIETEVATPEELILYSNSKNEHFNQ
                     FYNKYPTAKLADNEAEIFTKADHSFVCKLPLAVLPLMKDCAAVLTPDRHVISIAAGVS
                     TSDIIEITPGLQVSKLIPSLTTAVNVGTTLIAHADTVNQANTSWLETTFEHFGHVMTI
                     REENMDIASDLTSSSPGIIAAIFEQFVEAALRRSSLSDAEVFQMINFALAGTSKLLVE
                     EDYTFSGLIERVATKGGITAEGIELSEEQLPQFFDELLDRTQTKYASSKKEIQAQKQD
                     LLL"
     gene            complement(2319..4592)
                     /locus_tag="U0308_000689"
     CDS             complement(2319..4592)
                     /locus_tag="U0308_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEM2315678.1"
                     /translation="MATQKKKTSGRKKSSTRSKKKQSASFRLEITGVILIAIGVIGLL
                     QLGFVGRGFFALAEMFVGLLSYVLLAGSVILGGYMVIRRKMPHLFSKRLVGIYLIVLG
                     FLTYIHMYFIIHNLGANASVISSTWKLVLENLFRPNQVGFVGGGMIGAVITSVTYFLL
                     DRLGTNLIAVLLIIYGFSLVSGISIRQFFSKIAEFVRYLFAKGKVATEKGKEVKAKRD
                     KKKAEKIVEVEPDEVLDVVDPAQEEKAPPIISNFSSKVEQEKAPVEEKTTKQEQDLEM
                     FQQESFENEIYQLPPVDILAPAKVTDQSKEYDQIKVNAKKLEDTFESFGVKAKITQVH
                     LGPAVTKYEVQPSVGVKVSKIVSLSDDIALALAAKDIRIEAPIPGKSAIGIEVANQNV
                     AMVSLREVLENNPKNNPDEKLQIALGRDISGEAMMASLDKMPHLLVAGATGSGKSVCI
                     NGIITSILLRAKPHEVKMMMIDPKMVELNVYNGIPHLLAPVVTNPKKAAQALQKVVAE
                     MERRYDLFSHTGTRNMQGYNDYVKKHNELNEEKQPELPFIVVIVDELADLMMVASNDV
                     EDAITRLAQMARAAGIHLIIATQRPSVDVITGVIKANIPSRIAFAVSSSIDSRTILDM
                     GGAEKLLGRGDMLLLPVGSSKPTRIQGAFLSDAEVEDVVNYVISQQKAQYSEEMIPDD
                     IPEVEGEVTDELYHEAVELVVEMQTASVSMLQRKFRIGYNRAARLIDEMEQRGVVGPH
                     EGSKPRRVNVEINPEHE"
     gene            complement(4743..5669)
                     /locus_tag="U0308_000690"
     CDS             complement(4743..5669)
                     /locus_tag="U0308_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM2315679.1"
                     /translation="MSYVQINESFMEELALKKVKQERRKRLKWFVYKFLMITFGAILM
                     GVGLELFLVNNRILDGGVVGISIIISQLTPLPLGVLTFVLNIPFFIIGYRKIGKVFAL
                     FTLYGIAVMSIVTLVLHDMDPVTDDLLLATVFGGMTLGLGVGLVIRNGGALDGTEIIS
                     IIINGRTPFSTGQIIMFINIVIFIVAGLVFNWDRAMYSLITYFLAYKVIDIVIQGVDE
                     SKSAFIISRYYEEIGAEIMEQLGKGVTYLDATGGYSGDVRKVVFVIVSRFEEVKVKAI
                     LDEIDPDAFLAVGGSMSEVRGGKLMNTKTPHL"
     gene            5920..6879
                     /locus_tag="U0308_000691"
     CDS             5920..6879
                     /locus_tag="U0308_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HEM2315680.1"
                     /translation="MSDYQVLLYYKYTTIDDPETFAKEHLAACKEMELKGRILVATEG
                     INGTVSGTVEATNKYMDYMANDARFADMVFKIDAADAHAFKKMHVRPRAEIVSLSLEE
                     DVNPLEVTGTYLEPSEFREALLDEDTVILDARNDYEFDIGHFRGAVRPDIQNFRELPG
                     WIEDNREQLADKKIVTYCTGGIRCEKFSGWLKTAGFDDVSQLHGGIATYGKNEETKGE
                     LWDGQMYVFDERIAVPINQVNPTIVGKDYFDGTPCERYINCANPYCNKQILASIENEK
                     KYLRSCSHDCRVHPANLYTKNLSKEEFTERLQAIDETLPEMVQ"
     gene            complement(6919..7995)
                     /gene="fni"
                     /locus_tag="U0308_000692"
     CDS             complement(6919..7995)
                     /gene="fni"
                     /locus_tag="U0308_000692"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HEM2315681.1"
                     /translation="MQKNDDLLRERRKDEHVALGVKQNEQLAPSSLEDIQLIGTSIPR
                     YNVKDIDLTTTIVGTNVPFPLYINAMTGGSRHTKKINAELAEIAREVAIPMAVGSQSA
                     ALKNSSLIDTYKIVREINPNGMILANISPEVALQEGLRAIEMLEANALQIHINPAQEL
                     VMQEGDRSFSHWLTRIEEYVKLSPVPVVVKEVGFGMTRETVKTLADIGVQTVDLAGKG
                     GTNFAQIENDRRRDQAYDFLLDWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIVK
                     ALALGADSVGMAGQIIYSLKKEGVTKTIEKLELWKEQLRGLFVLANAKNISELKTTPL
                     IISGELAKWGALREIDLVKLANRK"
     gene            complement(8024..8371)
                     /locus_tag="U0308_000693"
     CDS             complement(8024..8371)
                     /locus_tag="U0308_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1033 family protein"
                     /protein_id="HEM2315682.1"
                     /translation="MTKWNVYLTKGEYEPWWFFEEWETSIQADFAFSDKEAAFLKYQE
                     LADELLRNYPNHQTKKDCLLAAWNEEEVEYCEDCEDDIQTFHGLILFSDGEVYQPTPE
                     EKETIFKPVLTFA"
     gene            8511..8792
                     /locus_tag="U0308_000694"
     CDS             8511..8792
                     /locus_tag="U0308_000694"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEM2315683.1"
                     /translation="MARDTAILRVTGFVQGVGFRYTTKHVAYKYDISGTVKNLDDGSV
                     EIHAIAEEENLNKFIDAIKKGPSPGCRIEHVYIYKGAPVEERKTFDIVY"
     gene            8878..9159
                     /locus_tag="U0308_000695"
     CDS             8878..9159
                     /locus_tag="U0308_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315684.1"
                     /translation="MISILQILLEPEFISLTVTFLLMLTIFSYWSAITLLKPKMVLPA
                     DAICLKLVKISLRAQIYITTPNFVINWLAITRKCSAITDDEDSFSFSNV"
     gene            9196..10023
                     /gene="yidC"
                     /locus_tag="U0308_000696"
     CDS             9196..10023
                     /gene="yidC"
                     /locus_tag="U0308_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEM2315685.1"
                     /translation="MKKKNIILISVLLGALLLLTGCSMDPSQNTDGFFSTYLIQPFTS
                     FIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQA
                     RLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIA
                     SHTFLWFNLGSPDMVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMILFVS
                     FTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIKVMEQEEKEFEQIVEEQKKEK"
     gene            complement(10060..11511)
                     /locus_tag="U0308_000697"
     CDS             complement(10060..11511)
                     /locus_tag="U0308_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEM2315686.1"
                     /translation="MTTSPFSLKSRSLKFKWTFGASAAIFLTFFLFSYAIYQGIGQML
                     LNEEEPEVKELLLATTSTLTNQDLTDNEEIKYLFNNDKTVNRKLQDQVINLYDKDGHF
                     INKYYFSRSQDITSIDFSQYFVSGTDKFIMNKPTIDGQKMMTAQMPIVADDNTTVIGY
                     AQVVNPLTSYNRMMDRLLVTMILLGAVALFISGMLGYLLAQNFLNPLTRLARTMNDIR
                     KNGFQKRIETKTNSRDEIGELTVVFNDMMTRIETSFEQQKQFVEDASHELRTPVQIME
                     GHLKLLTRWGKDDPAVLDESLNASLTELERMKKLVQEMLDLSRAEQISQTKELQITDV
                     NATVEQVRRNFEVMYENFTFTLKEDDTDLRALIQHNHLEQILIIIMDNAVKYSGDGTE
                     VDMHVYKEQKQIHIDVRDYGEGISQEEIDKIFNRFYRVDKARSREKGGNGLGLAIAKQ
                     LVEGYLGTINAVSEPDKGTTIKITLPYIEPKSK"
     gene            complement(11508..12188)
                     /locus_tag="U0308_000698"
     CDS             complement(11508..12188)
                     /locus_tag="U0308_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2315687.1"
                     /translation="MNRILIVEDEKNLARFIELELQHENYETAVANDGRAGLELALNE
                     EWDAILLDLMLPHLNGVEVCRRVRQVKQTPIIMITARDSVIDRVSGLDHGADDYIVKP
                     FAIEELLARLRSLLRRVENAEQSAKQTTLQYRNLIVEKENRIVKRDEEIIDLTKREYE
                     LLLTLMENVNIVLTREVLLNKVWGYETEVETNVVDVYVRYLRNKIDHPDEESYIQTVR
                     GTGYVMRT"
     gene            complement(12379..13797)
                     /gene="gndA"
                     /locus_tag="U0308_000699"
     CDS             complement(12379..13797)
                     /gene="gndA"
                     /locus_tag="U0308_000699"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HEM2315688.1"
                     /translation="MAKQEIGVIGMGVMGRNLALNIESRGHTVSIFNRSTEKTKAVME
                     ENADKKLVPTYSLEEFVESLEVPRRILIMVKAGDATDMMIEAVKPFLNEGDILIDGGN
                     AFFKDTIRRNKELSEEGFNFIGTGVSGGEEGALKGPSIMPGGQRKAYDLVAPILREIA
                     AVADGEPCVTYIGPDGAGHYVKMVHNGIEYGDMQLIAEAYTILKEIGGLSHDELADVF
                     EEWNNGELDSYLIEITKNILKVKDEETGKPIVDVILDKAGQKGTGKWTSQSALDLGVP
                     LSLITESVFARYISALKDERVYASTVLSGPSNYRFEGDKKAFVESVRRALYFSKIASY
                     AQGFAQMRAASEENDWDLQYGEIAKIFRAGCIIRARFLQKITDAYNKDKNLKNLLLDP
                     YFKDIAHNYQGDLRTVVAEAVKAGIPVPTFTAAISYYDSYRSEVLSANLIQAQRDYFG
                     AHTYERVDKPGVFHTEWPQVED"
     gene            complement(13942..15039)
                     /locus_tag="U0308_000700"
     CDS             complement(13942..15039)
                     /locus_tag="U0308_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEM2315689.1"
                     /translation="MMISNVKKYFTELIQTPSVSGKETAILTYIKKHLAKLNIEYSLD
                     EDYGLIARIPATKEKFPTIFFCSHVDTHPNAATPVFQMEQDVFTVEEGTSLGADDKAA
                     VAAMLAAIDYFCAERTAHGEIEFIFTTKEELGMIGMRLFPEEKITAAYGYCLDAPGEV
                     GNYQLQANTLVALEFTIASSEAAQMSPISIARMALHATRPGRIDRENKWEIQSFSGGI
                     NDENQQDAQLEVLFTSAASFRKALLHIQTIRERFAQTCEKYGALLTHDTKLIYEGYRI
                     RSKHPLMNIFQKAAKKQSLETREIFLEGGTDANVLNEKGIPTMLLSAGYENAHTEEET
                     VSVEQLEKLTQLVIDLAESAKNEKILLRKLN"
     gene            15157..15252
                     /gene="prli42"
                     /locus_tag="U0308_000701"
     CDS             15157..15252
                     /gene="prli42"
                     /locus_tag="U0308_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003722501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stressosome-associated protein Prli42"
                     /protein_id="HEM2315690.1"
                     /translation="MTNKKVVRVVVILMLIAIVLSSVLTGVLMFL"
     gene            complement(15409..16659)
                     /locus_tag="U0308_000702"
     CDS             complement(15409..16659)
                     /locus_tag="U0308_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEM2315691.1"
                     /translation="MAVEKITMPKLGESVTEGTISSWLVKPGDTVEKYDAIAEVLTDK
                     VTAEIPSSFSGTIKEILAEEDETLEVGEVICTIETADAGSSEPVAEVEQTETKAPEKQ
                     ETKQVKLADAPASGRFSPAVLRIAGENNIDLSTVEGTGKGGRITRKDLLQVIENGPVA
                     KREEMKSAPQEKAAMPTPPVRSAAGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEV
                     DATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTWAGDKIIEHAN
                     INISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVN
                     STGSFGSVQSMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGL
                     LAGKFLQAIKANVEKISKENTALY"
     gene            complement(16690..17673)
                     /locus_tag="U0308_000703"
     CDS             complement(16690..17673)
                     /locus_tag="U0308_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEM2315692.1"
                     /translation="MPVISYIDAITMALKEEMERDDKVFILGEDVGKKGGVFKATAGL
                     YDEFGEDRVLDTPLAESAIAGVGIGAAMYGYRPVAEMQFADFIMPAVNQIISEASRIR
                     YRSNNDWSCPIVIRAPFGGGVHGALYHSQSVEKVFFGQPGLKIVVPSSPYDAKGLLKA
                     AIRDNDPVLFFEHKRAYRLLKGEVPETDYIVPIGEANVVREGDDITVITYGLAVQFAQ
                     QAAERLAAEGVEAHILDLRTIYPLDQEAIIEATKKTGKVLLVTEDNKQGSIISEVAAI
                     ISEHCLFDLDAPIARLAGPDTPAMPFAPTMEKHFMINPDKVADAMKELAEF"
     gene            complement(17690..18685)
                     /locus_tag="U0308_000704"
     CDS             complement(17690..18685)
                     /locus_tag="U0308_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HEM2315693.1"
                     /translation="MTLKEAGLTEDKLIKMYETMLMARRLDERMWLLNRSGKIPFTIS
                     GQGQETAQIGAAFAFDLDKDYALPYYRDLAVVLAFGMTAKDIMLSAFAKAEDPNSGGR
                     QMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLAAKMAGDEIAIYASTGEGSSNQGDFH
                     EGINFASVHKLPVVFVIHNNQYAISVPASKQYAAEKLSDRAIGYGIPGERVDGTNMGE
                     VYAAFKRAADCARNGEGPTLIETVSYRFTPHSSDDDDSSYRSREEVDEAKGKDPLKIF
                     QAELLEEGYLTEEKIAEIEKSIAKEVNEATDYAESAAYAEPESSLLYVYDEEANS"
     gene            complement(18710..20137)
                     /gene="lpdA"
                     /locus_tag="U0308_000705"
     CDS             complement(18710..20137)
                     /gene="lpdA"
                     /locus_tag="U0308_000705"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEM2315694.1"
                     /translation="MATEYDVVILGGGTGGYVAAIQAAKNGQKVAVVEKGKVGGTCLH
                     RGCIPTKALLRSAEVLQTVKKASEFGISVEGTAGINFLQAQERKQAIVDQLEKGIHQL
                     FKQGKIDLFVGTGTILGPSIFSPTAGTVSVEFEDGSENEMLIPKNLIIATGSKPRTLN
                     GLSIDEENVLSSDGALNLETLPKSIIIVGGGVIGMEWASMMHDFGVEVTVLEYADRIL
                     PTEDKEVAKELARLYKKKKLIMHTSAEVQAASYKKTDTGVEIKAIIKGEEQTFAADKI
                     LVSVGRSANTENIGLQNTDIATENGFIQVNDFYQTKESHIYAIGDCIPTIQLAHVAME
                     EGTIAANHIAGKVAEKLDYDLVPRCIYTSTEIASVGITEEQAKERGYEVKKGKFFFRG
                     IGKALVYGESDGFIKIIADKKTDDILGVSMIGPHVTDMISEAALAQVLNATPWEVGNT
                     IHPHPTLSESFREAALAVDGNAIHG"
     gene            complement(20152..21219)
                     /locus_tag="U0308_000706"
     CDS             complement(20152..21219)
                     /locus_tag="U0308_000706"
                     /EC_number="2.7.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="butyrate kinase"
                     /protein_id="HEM2315695.1"
                     /translation="MSFDVLTINPGSTSTKLAVYQGDKVLFEETVRHTMQELADFNNV
                     QEQFDFRWQVLRRVMDAYGYDVKKLQAVVGRGGLLRPVAGGTYMVTEKMIDDLKENKY
                     GEHASNLGALLAKKLADELTIPSFIVDPVVVDEMQEIARISGNAFIARKSIFHALNHK
                     AAGRKIAKELGKDYEKMNFVIAHLGGGISVAAHRQGKAVDVNNALDGDGPFSPERSGS
                     LPMNDFLEACFSGKWTKRELHELIVGRGGMISYLGTNSMLEVEAKVQAGDVKAIEAFD
                     AMAYQVSKEIGACSVVLQGKVDAIILTGGLARSELFTNKIIEQTNWITSVIIEPGEDE
                     LEALNSGVQRVLAGLEKEKEY"
     gene            complement(21356..22222)
                     /locus_tag="U0308_000707"
     CDS             complement(21356..22222)
                     /locus_tag="U0308_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEM2315696.1"
                     /translation="MTKSRFFSDVIETSSFVFAVAGADDEVVLETIRLALNQNLGKFL
                     LFGKKEDKTLTANENVTWIQTDTAEAAAQGAILAVKNKEADILVKGFIPTATLMHHVL
                     KKENGLRTDQLLSQIAIFDIPTYHKPLLITDCAMNVAPKTKEKIAITENAIAVAHQIG
                     IANPKIALLSAVEEVTAKMPSTVEAQEVVQHFDNTIAVSGPLALDVAISKEAALHKGI
                     TDSSAGEADILIAPNIETGNALYKSLVYFAGAKVGSAVVGAKVPIVISSRNDSPENKL
                     ASFILTVRLVEK"
     gene            complement(22352..24043)
                     /gene="recN"
                     /locus_tag="U0308_000708"
     CDS             complement(22352..24043)
                     /gene="recN"
                     /locus_tag="U0308_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEM2315697.1"
                     /translation="MLQEMTIKNFAIIESLSLTFQEGMTVLTGETGAGKSIIIDALGL
                     LVGGRGSADFIRHGEERLELQGLFALAEDNLACRNALIENGIDASDDMVVLERSLFRS
                     GKNSCRINGKLVTTVLLRQIGSKLIDIHSQHEHQELMNEEFHLSLLDRFASDKIKPAL
                     TKYQTNFKEYQTIEKEWQNWTKNERELAQRLDMLRFQQQEIENANLQAGEEDRLLEQK
                     NILANFEKLNENLQGAYAAIQGEPGGLEFVGEAMRQMEAAASIHTDYKAVSEAISSSY
                     YMLEDSMSQIRQSLDQLEFQPEELNQIESRLNDLNQLKRKYGKTIEDIIQYEQEISSE
                     MEKLTDSESHVGHLETKLATLKAELTKQANTLTEIRKKAAVTLEKQIKQELNHLYMEK
                     AIFSVRFEANKMELTDSGQDSVVFYMSTNPGEPLKPLAKIASGGELSRMMLALKTIFS
                     RHQGITSIIFDEVDTGVSGRVGQAIAEKIYAVSVGSQVLCISHLPQVAAMANHHYYIT
                     KKVQNKRTTTSVTVLKGEEKVEEISRMIAGIEVTELTKQHAKEMIEQAEKVKQTY"
     gene            complement(24066..24515)
                     /gene="argR"
                     /locus_tag="U0308_000709"
     CDS             complement(24066..24515)
                     /gene="argR"
                     /locus_tag="U0308_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HEM2315698.1"
                     /translation="MNKGHRHIIIRELITSNEIDTQEDLVELLLERDVKVTQATVSRD
                     IKELHLVKVPTQTGGYKYSLPADNSFNPHQKLKRALIDCFIGIDNVQFMIILKVMPGN
                     GNSVGALIDNLDWPEKAGTICGDDTCLIICRSEENAKTLTDRFIDML"
     gene            complement(24706..25530)
                     /locus_tag="U0308_000710"
     CDS             complement(24706..25530)
                     /locus_tag="U0308_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEM2315699.1"
                     /translation="MTIKKERADILLVEQGLFETREKAKRAIMAGIVYRKEERVDKPG
                     EKIPIDSELQVKGKQMPYVSRGGLKLEKALQVFDFEVKDKLMLDIGASTGGFTDCALQ
                     NGARHSYALDVGYNQLAWKLRNDDRVTVMERTNFRHVTPADFSEGLADFATIDVSFIS
                     LKLILPVLRTVLVTGGDVMTLIKPQFEAGREQVGKKGIIRDPAVHESVVEHIVQFALD
                     NGYDLMGLDFSPITGGEGNIEFIAHLKWTGGETGTNHLEPNAIAKLITKAHTKLDK"
     gene            complement(25527..27356)
                     /gene="dxs"
                     /locus_tag="U0308_000711"
     CDS             complement(25527..27356)
                     /gene="dxs"
                     /locus_tag="U0308_000711"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEM2315700.1"
                     /translation="MSCFYLDLLKIKDPSFMKQLDIQELEALAADIRAFLITSTSKSG
                     GHIGPNLGVVELTIALHYSFNSPKDKFIWDVGHQSYVHKILTGRASQFGTLREHGGLD
                     GFPKRKESIHDVFETGHSSTSLSAAAGMVIARDIKKEEFYVIPIIGDGALTGGMALEA
                     LNHIGDMGKDMIVILNDNDMSIAPNVGAIHNILGKLRTSDTFKQTKAKVDGTFFEELG
                     FMYLGPINGHDIEEVITNLELAKRTKGPVLLHIVTKKGKGYQPAELDSRGTWHGTGPY
                     KVETGSFIKPAKRAASWSSVISNELIRLAEKDERIVAITPAMPVGSKLEKFAKAFPER
                     FFDVGIAEQHATTMAAGLATQGMKPFLTIYSTFLQRAYDQLVHDVCRQKLNVVIGIDR
                     AGLVGADGETHQGIFDISFLNSIPNMTISMPKDEVEARQLMDTAFSYNDGPFAIRYPR
                     GEAPGAQVAESNTLIPIGKWETIIQPIDAVILTFGPTIRLALKAAEQLELEGYHVGVI
                     NARYIKPLDEALLHQILKQKIPILTVEESLLKGGFGASVLEFIEASNYSDVVMHRIGL
                     PDEFISHGSVSIILESFGISTTGIVLKIKEMLAQSGKLRAKRL"
     gene            complement(27523..27723)
                     /locus_tag="U0308_000712"
     CDS             complement(27523..27723)
                     /locus_tag="U0308_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEM2315701.1"
                     /translation="MEQGTVKWFNAEKGFGFIERENGDDVFVHFSAIQGDGFKSLDEG
                     QAVTFDVEEGQRGPQAANVQKA"
     gene            complement(27922..28803)
                     /locus_tag="U0308_000713"
     CDS             complement(27922..28803)
                     /locus_tag="U0308_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEM2315702.1"
                     /translation="MQDLTLFLEQYKKVIDESLFKEISERNIEPRLKESMLYSVQAGG
                     KRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNH
                     KVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEGMVGGQLADM
                     EAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQI
                     SDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLDGAKRALNEHVAIAKSALSGHDF
                     DDEILLKLADLIALREN"
     gene            complement(28806..29033)
                     /locus_tag="U0308_000714"
     CDS             complement(28806..29033)
                     /locus_tag="U0308_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEM2315703.1"
                     /translation="MATKKKTFEEAIAELETIVEALENGSASLEDSLDMYQKGIELTK
                     LCQDKLQSAEKRMAKVVTDAGEEIPFEADGE"
     gene            complement(29023..30375)
                     /locus_tag="U0308_000715"
     CDS             complement(29023..30375)
                     /locus_tag="U0308_000715"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEM2315704.1"
                     /translation="MEQDKYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLKQPASG
                     HLYFTVKDEFAMLRSVMFHKAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHME
                     PDGVGALYIQLEQLKSQLEKEGLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIH
                     RRMPSVEVIVYPTIVQGEKAAQKIVENIGKINQRNDIDVMIIGRGGGSLEELWAFNEE
                     PVVRAVYDSDVPVISAVGHETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAER
                     KYRLLAVTRQELERKERSLEQLKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIF
                     VKQTVFDRLNDRLHYYHPNKEIELQKEQMALRLQALEKAMKQLLKDKQQSFFRQIDAL
                     EHLSPLSLLKRGFGVTYKENMLVKSVQELEVGDNIQVKMQGGQIEALITAKEEDISGN
                     "
     gene            complement(30394..31248)
                     /gene="folD"
                     /locus_tag="U0308_000716"
     CDS             complement(30394..31248)
                     /gene="folD"
                     /locus_tag="U0308_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEM2315705.1"
                     /translation="MGEIIDGKKLAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQA
                     SRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEH
                     ISEEKVIDTISYDKDVDGFHPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRA
                     VVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDY
                     IKPGAIVIDVGMDRDENNKLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKA
                     AKRIWKMN"
     gene            complement(31345..31731)
                     /gene="nusB"
                     /locus_tag="U0308_000717"
     CDS             complement(31345..31731)
                     /gene="nusB"
                     /locus_tag="U0308_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEM2315706.1"
                     /translation="MKRREAREKALQALFQIELNEMSLDQAIKNIMEDEQDDYMEKLV
                     EGVMANKAEIDAIIEPNLDNWRMDRLSKVDLSLLRLSVYEIKYLDDVPNRVSLNESIE
                     IAKIYSDEKSSKFINGVLANIAPEDK"
     gene            complement(31762..32169)
                     /locus_tag="U0308_000718"
     CDS             complement(31762..32169)
                     /locus_tag="U0308_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HEM2315707.1"
                     /translation="MAYTKDLRKQNDAPLGKIEIAPEVIGVIAGLAASEIENVAYMQG
                     GFATEMREKFSGAVNYRKGVKVELTEEGILIELYCSVLFGATIPLVAQNIQDAVRDTI
                     FNMTGLNVLEINVHIVGVQFEKTETLSFDDFEL"
     gene            complement(32173..33537)
                     /gene="accC"
                     /locus_tag="U0308_000719"
     CDS             complement(32173..33537)
                     /gene="accC"
                     /locus_tag="U0308_000719"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEM2315708.1"
                     /translation="MIKKVLVANRGEIAVRIIRAAKELGVETVAIYSEADKEALHIQL
                     ADEAYCVGPAATKDSYLNMSNIISLAVLTNCDAIHPGYGFLAENADFAELCEDCNITF
                     IGPSASAISQMGTKDVARETMRKAGVPIVPGSQGIVKDVEDGKKIAKKIGYPVIIKAT
                     AGGGGKGIRVAENEEKLISGIQTTQQEAEAAFGDPGVYLEKYIQDFRHVEIQVLADNH
                     GNVIHLGERDCSIQRRLQKLIEESPSPAIDEKTRQKMGKAAVKAAKAVNYSGAGTIEF
                     IFDHHENNFYFMEMNTRIQVEHPVTELVTGVDLVKQQFLVASGEELQIKQADVKLTGW
                     AMECRINAENPEKNFMPAPGEIKFYLPPGGLGVRIDSAAYPNYKIPPYYDSMIAKVIC
                     YAETREEVIQKMKRALSEFAIDGIPSTIPFHLRVLDNDVFLSGDFNTKFLEQNDVMNL
                     SKEG"
     gene            complement(33551..34030)
                     /gene="accB"
                     /locus_tag="U0308_000720"
     CDS             complement(33551..34030)
                     /gene="accB"
                     /locus_tag="U0308_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEM2315709.1"
                     /translation="MLSIDEIKQLIELIDESTLDEFELETKDSKILLKKNKTVVAAAV
                     QEAPIAITQAPAQAAPVAQAQTAAPQTEANTAEDASLEVITSPMVGTFYASASPEDAN
                     FVSVGSKVSAQSVVCIVEAMKLFNEITADIDGEIAEILVSSGELVEFGQPLFKVRKK"
     gene            complement(34189..34746)
                     /gene="efp"
                     /locus_tag="U0308_000721"
     CDS             complement(34189..34746)
                     /gene="efp"
                     /locus_tag="U0308_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011231892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEM2315710.1"
                     /translation="MISVNDFKTGLTIEVDNGIWRVLDFQHVKPGKGAAFVRSKLRNL
                     RTGAIQEKTFRGGEKVAKAQIDNRKMAYLYADGTNHVFMDNESYEQIELPEDQIAHEL
                     KFLKENMEINIIMYQGETIGIDLPNTVELVVTATDPGIKGDTSSGGSKPATLETGLVV
                     QVPFFVNEGDKLVINTTEAAYVSRA"
     gene            complement(34849..35910)
                     /locus_tag="U0308_000722"
     CDS             complement(34849..35910)
                     /locus_tag="U0308_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEM2315711.1"
                     /translation="MSKLTKIQETLGKEKIEAVLVTSEFNRRYVSGFTGTSGVALILP
                     EKAYFVTDFRYTEQAAKQAEGYEIVQHTGPIFDTVEDLLIKNDTKTLHFEADYVTVSE
                     FKQMERVFNRQLIPLTGFFEEMRKVKTASELKAIRTACDIADAAFAHIIQFIKPGMAE
                     IEVSNELEFFMRRAGATSSSFDTIVASGVRSALPHGVASDKKIEVGDFVTMDYGCYYD
                     GYCSDMTRTIAVGEPAEKLKEIYQITLDAQLKVIDSLKPGMTGIEADAIARDYISSFG
                     YGDAFGHSLGHGIGLEIHEGPNLSFKSPQKLEVGHVVTDEPGIYLPGIGGVRIEDDLL
                     ITETGNEILIHSPKELIIL"
     gene            36090..>36690
                     /locus_tag="U0308_000723"
     CDS             36090..>36690
                     /locus_tag="U0308_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1385 domain-containing protein"
                     /protein_id="HEM2315712.1"
                     /translation="MSKQNVPSYGGQAVVEGVMFGGRKQTVTAIRRIDGSLEYFYLEK
                     NSPVWVMRMKKIPFLRGIVALIESSAIGSKHLAFATDRYDEDPNNPVEEEKIEKKESK
                     VAMWLGVAVIGILSFVFAKFVMTLIPVFLAELFRPIVPGDTAQVFLESLFKLILLLTY
                     IFAVSQTPIIKRVFQYHGSEHKVINCYEENLPLTVENVQK"
BASE COUNT        10426 a         7706 c         6250 g        12308 t
ORIGIN      
        1 attttttata actataaaat caaggttttt ctggaacttt aatgtcccca tcaacgattt
       61 tttgtttgta ctcttctact ttagcaagaa cgtctttaga aatattatct tgatgttcag
      121 aaagccctac agcatcttta tcaagaccgt attcaatttt agttccgcct gggaaatctc
      181 cagctttagc acgagttgca aggtcttcta cagcgatatc aacacgtttg atttcagatg
      241 taagagttac attgtaatct ttgccatcgt ttgctgtaac ttttccttcg tcccattggt
      301 cacggtcaac accgattacc caaacagcac ggctaggatc ttttttcttc aggtttttag
      361 cttctgcaaa gacaccgtta ccagtaccac cagcagcatg gaaaattacg tcaactccac
      421 ttgaatacat ggaagaagcg atttgttgtc ctttgtctgc tttagcgaaa tcgtttgcat
      481 attgtacatc aatttgtgcg ttaggattaa cagcttttac accagcagtg aaaccagctt
      541 caaaacggtc gataacagtt ccttttactc caccaacaaa tccaacttta tttgtttttg
      601 ttgttaagcc agctactaca ccaactagat aagaaccatc gttatcttta aatccaatac
      661 ttactacatt atcacggtca tcaattgtgt catcaacaat agcgaattga tttttaggtt
      721 tttgtttaga aacttcttca attgcatctt tcagtttgta accaattcca taaattaaat
      781 cataatcgct acgaacagca gtgtttaagt ttgttttgta gtctgcttca gaagctgatt
      841 gcaagtagtt gtaaccatct gtaccttttt ccatgtcgtt agctttacca aatttttgta
      901 agccttccca tgctgattgg ttaaacgaac ggtcatcaac gccaccagta tctgtaacca
      961 ttgctactgt aaaatcttta ctgctcttat catcgctact ttttttatcg tcgctactcg
     1021 aaccacaagc acctaggata acgccagaag caataatcat tgatagtgct aaagcaaatg
     1081 tacgcttttt caccttaaaa cccctcccga gagatataat gttagtcaga gctttctgtc
     1141 aaaacaaaca ttcaggcgcg tattaaaaaa ttatgtatgg tccctttttc ggaaaacgca
     1201 caaaaacatt taacgtcttc tctaactgtt cttaatataa catggaaaat aaaataaata
     1261 aataaccaac ttcataaatt tttaatgcaa atgaattcag aaaatttaat tctgtcggaa
     1321 tcattcgttt ttttgtcaat ccttaggcac aagcgcatta acgtgaaaaa gtaaacaatc
     1381 aagtttagtt gcaatcctct tttattccct tcataataaa atgaataatg aaaggcggga
     1441 tggaaatggc aaaaataggt tttattggtt ttggaagtat ggcatcgtta attgcgacta
     1501 aaataataga aactgaggtt gcaactcccg aagaactcat cctttattcc aattcaaaaa
     1561 acgaacattt caaccaattt tataataaat atccaactgc taagctagct gataacgaag
     1621 ccgaaatttt cacaaaagca gatcatagct tcgtttgtaa gttacctctc gcagttttac
     1681 cacttatgaa agattgtgct gcggtattga cacctgatcg tcatgtgatt tctattgcag
     1741 ctggtgtgag tacttcagat attattgaaa tcactccggg tttacaggta agtaaattaa
     1801 tcccttctct cacaactgct gttaatgttg gaactacttt gattgcgcac gctgacacag
     1861 tgaatcaagc taacacttct tggttagaaa cgacatttga gcattttgga catgtaatga
     1921 ctatccgaga ggaaaatatg gatatcgcta gcgatttaac tagctcttct cctggaataa
     1981 ttgctgctat tttcgagcaa tttgtagaag ctgctcttag aagatcttca ttatcagatg
     2041 cggaagtatt tcaaatgatt aattttgctt tagctgggac ttctaaatta ttagtagaag
     2101 aagattacac gtttagtggc ttaattgaac gcgttgctac aaagggcggg atcactgctg
     2161 aaggcattga actcagtgag gagcagttac cccaattttt tgacgaactc cttgaccgaa
     2221 ctcaaacaaa atatgcttct agtaaaaaag aaattcaagc acaaaagcaa gatttacttt
     2281 tataaaaaag ggttgcgact acaaatcgca accttttttt attcatgctc tggattaatt
     2341 tccacattta ctcttcttgg tttacttcct tcgtgaggtc caactacacc tctttgttcc
     2401 atttcatcaa tcaacctagc tgcacgatta tagccaatac ggaattttct ttgtaacatc
     2461 gaaacggaag ctgtctgcat ttctacaaca agctccactg cttcgtgata caattcatcc
     2521 gttacttctc cttcgacttc tggaatatca tcaggaatca tttcttcgct atattgtgct
     2581 ttttgttgcg aaataacgta attaactaca tcttctactt ctgcatccga taaaaaagcg
     2641 ccttgaattc gggtaggttt actagagcca actggaagta acagcatatc gcctcgtcca
     2701 agtaacttct ctgctccgcc catatcaaga atcgttcttg aatcaatgga acttgaaacg
     2761 gcaaaagcaa ttcgagacgg gatattcgct ttaattacgc cggttataac atctactgat
     2821 ggacgctgtg ttgcgataat taaatgtatt cccgcagcac gtgccatttg agcaaggcga
     2881 gtaatcgcat cttctacgtc attggaagct accatcatca agtcagctaa ctcatctaca
     2941 attacaacaa taaaaggcaa ttcaggttgt ttttcttcgt tcagctcatt atgttttttt
     3001 acataatcat tgtagccttg catattacga gtacctgtat gcgaaaataa atcatagcgc
     3061 cgttccattt ccgcaacgac tttttgcaat gcttgggctg cttttttagg attggtaaca
     3121 actggtgcga gcaagtgtgg aatgccatta tagacattta gctcaaccat ttttggatca
     3181 atcatcatca ttttgacttc atgtggtttg gcacggagta aaatgcttgt aataatacca
     3241 ttaatacaca cagatttccc gctaccagtt gctcctgcga cgagtaaatg aggcatctta
     3301 tcgagacttg ccatcattgc ttctccagaa atatcacgac caagtgctat ttgaagcttc
     3361 tcgtctggat tgtttttagg gttgttttct aacacttcac gtaaagaaac catggctaca
     3421 ttttggttcg ctacttcgat tccaatagca gatttccccg gaattggcgc ttcaattcga
     3481 atatcttttg ctgctagagc aagtgctata tcatcactga gtgaaacaat cttgctcact
     3541 ttaacaccga cagatggttg tacttcatat tttgtcactg cagggccaag atgaacttgg
     3601 gtgatttttg ctttcactcc gaagctttca aaggtatctt ctaatttttt tgcgtttact
     3661 ttaatttggt catattcttt actttgatcc gttactttag ccggtgctaa aatatcaacg
     3721 gggggcaatt gataaatctc attttcgaac gattcttgct gaaacatttc taaatcttgc
     3781 tcttgtttgg ttgttttttc ttcgactggt gctttttctt gttctacttt ggagctaaag
     3841 ttagagatga ttggcggcgc tttttcttct tgcgcggggt ctactacatc tagtacttca
     3901 tcaggctcaa cctcaactat tttctctgct ttctttttat cacgtttcgc tttcacttct
     3961 ttgccttttt cggtcgcaac tttgcctttt gcaaataagt aacgaacaaa ttcggcaatt
     4021 ttggagaaaa attgccggat ggaaataccc gatacaaggg aaaaaccata gataataagt
     4081 agaacagcta tcaaattcgt tcctaatcta tctaataaga aatacgtaac ggaggtaatt
     4141 actgccccaa tcattccccc accaacaaaa ccaacttgat ttggtctaaa taaattttct
     4201 aatactaatt tccaagtact agaaataacg gaggcatttg ctcctaagtt gtggataatg
     4261 aaatacatat gtatatatgt caaaaagcct aaaacaataa gataaatacc gactagtctt
     4321 ttgctaaata agtgaggcat ttttcttcta atcaccatgt acccaccaag tatcacgcta
     4381 cccgcaagta atacatagct taaaagacca acaaacattt cagccagagc aaaaaaaccg
     4441 cgaccgacaa agcctaattg taaaagtccg ataactccta ttgctattaa aataacccct
     4501 gttatttcta aacgaaaaga ggctgattgt ttcttttttg agcgtgttga cgatttttta
     4561 cgtccgctcg tttttttctt ttgtgtcgcc atttcaagtc ccacccattc cttttttgct
     4621 tgttttatta tagcacatct atccgttctg tcgctcatac tatagcccta ttatacaaac
     4681 aaatgtttcc tttcgtcaaa aaaccatata tcccaagtag gagatatatg gtttctgttt
     4741 tgttataggt gcggtgtttt cgtgttcatc agctttccgc cgcggacttc cgacatactt
     4801 cctccgacag ctaagaaggc atctggatct atttcatcca gaatggcttt cacttttact
     4861 tcttcaaatc ttgagacgat aacgaaaact acttttctta catcaccgga atacccgcca
     4921 gttgcatcta agtatgtaac accttttcca agttgctcca taatttctgc tccaatttcc
     4981 tcgtaatagc ggctgataat aaaagcactt ttcgattcat ctacaccttg aataacaata
     5041 tcaattactt tatacgctag gaaatacgta attaaggaat acatcgctcg atcccagttg
     5101 aacacaagtc cagcaacgat aaaaataaca atattaataa acataataat ttgtcctgtt
     5161 gaaaatggcg tccgaccgtt aataatgatt gaaatgattt ctgttccatc aagcgcccct
     5221 ccgttacgaa taacaagacc caccccaaga ccaagcgtca ttccgccaaa aacagtcgca
     5281 agtagtaaat catctgtcac tggatccata tcgtgtaaaa cgagcgttac aatcgacatg
     5341 actgcaattc cgtacaatgt aaacagcgca aatacttttc cgatttttcg gtaacctatg
     5401 atgaaaaacg gaatattaag tacaaaagtt aaaaccccta gtggcagcgg cgttagttgc
     5461 gaaataataa tcgaaatacc aacgactcca ccatctaaaa ttcggttgtt tacaaggaaa
     5521 agttccagcc caacccccat caaaattgcg ccaaaggtaa tcattaaaaa cttataaaca
     5581 aaccacttca accttttcct gcgttcttgt tttacttttt ttaaagctag ttcttccata
     5641 aacgattcat ttatttgcac atagctcacg cccaatcctt acttcattct ttattttagg
     5701 caatgaaaac aggatttgct ttcatcaaca aaattttcgc ttcatattta ataagtatac
     5761 catagctgtt ttgtacttgt acatatagtt aactataaga agcatttttt tacggttcgg
     5821 ttacttgcca gtctgaattt gctatagtat agtattaatg cgcaaacttg tggagaattt
     5881 ttcttacaca tgaaatatat tttgaagggt gataagatta tgagtgacta tcaagtgttg
     5941 ttatattaca aatacacaac gattgatgat ccagaaactt ttgcaaaaga gcatcttgct
     6001 gcttgcaaag aaatggaatt aaaaggccga attttggtgg ctactgaggg gattaatggc
     6061 accgtttcgg gtacagtaga agcaacaaac aaatatatgg attatatggc aaacgatgct
     6121 cgcttcgctg atatggtatt taaaattgac gcggctgatg ctcatgcttt taagaaaatg
     6181 catgtacggc ctcgtgctga aattgttagt ttaagtttag aagaagatgt taatccttta
     6241 gaagttacag ggacttattt agagccttct gagtttcgtg aagcattgtt ggatgaagat
     6301 acggttattt tagacgctag aaatgattat gaatttgata tcggtcattt ccgcggcgct
     6361 gttcgtccag atattcaaaa tttccgtgag ttaccaggat ggattgaaga taatcgcgag
     6421 caacttgctg ataaaaaaat cgtcacttac tgtactggtg gtattcgttg tgagaaattt
     6481 tctggttggt taaaaacagc gggttttgat gatgtaagtc aacttcacgg cgggattgcg
     6541 acttacggta aaaacgaaga aaccaaaggg gaactttggg acggccaaat gtacgttttt
     6601 gatgaaagaa tcgcggttcc gattaaccaa gtaaacccta ctatcgttgg gaaagattac
     6661 tttgacggca cgccttgcga acgttacatc aattgtgcta acccgtattg caataagcaa
     6721 atcctagctt ctatcgaaaa tgagaaaaaa tatttgcgta gttgttcgca tgattgccgc
     6781 gttcatcccg caaatcttta tacgaaaaat ttatctaaag aagaattcac tgaacgcctt
     6841 caagcaatcg atgaaacttt accagaaatg gttcaataaa taaaaaacca gctttgctaa
     6901 atgaatagca gctggttttt attttctatt agctagtttg actaaatcga tttctcgtaa
     6961 tgcgccccat ttagcaagtt caccacttat gattaatggc gttgttttta attctgagat
     7021 gtttttcgca tttgcaagaa caaataagcc acgtagttgt tctttccata gctccagttt
     7081 ttcaatggtt ttggtgacgc cctctttttt tagtgaataa ataatttgtc ctgccatacc
     7141 tacactatct gctccgagcg ctaatgcttt aacgatatct aacgggttcc taataccacc
     7201 tgacgctaaa taagcaatct ttggcgcatc ttggtgttgc atgtctatta aagcctgtcc
     7261 ggtggaaata ccccaatcaa gtaagaaatc atatgcttga tcacggcggc gatcattttc
     7321 aatttgggca aagtttgttc cgccttttcc agctaaatct acggtttgaa cgccgatatc
     7381 agctagcgtt tttactgttt cacgcgtcat tccaaagcca acttctttta caactactgg
     7441 aactggcgaa agcttgacgt actcttctat tctagttagc caatgactaa aagaacggtc
     7501 gccttcttgc ataactaatt cttgtgccgg gttaatatga atttgaagtg catttgcctc
     7561 taacatttcg atcgcccgaa gtccctcttg aagggctact tctggactaa tatttgctaa
     7621 aatcatccca ttcggattga tttctctgac aattttatag gtatctatta gcgaactatt
     7681 ttttagagct gcagactggg aaccaacagc cattgggata gctacttcgc gtgctatttc
     7741 agcaagttcg gcattaattt ttttcgtatg ccgacttcca cctgtcatcg cattaatata
     7801 caatgggaaa ggcacattgg tccccacaat agttgtggtt aaatcgatat ctttcacatt
     7861 atagcgcggg atagaagttc caatcagttg aatatcttct aaactcgatg gcgctaactg
     7921 ctcattctgt tttactccaa gagccacgtg ttcgtctttt cgacgttctc ttaataagtc
     7981 atcgttcttc tgcatgtgtt aatcctccaa atttcttttc gcctcaagca aaggttaaaa
     8041 caggtttaaa aatcgtctct ttttcttcgg gagttggttg atacacttcc ccatcagaaa
     8101 ataaaataag cccgtgaaat gtttgaatat catcttcaca gtcctcgcag tactcaactt
     8161 cttcttcatt ccaagctgct aacaaacaat ctttttttgt ttgatgatta ggataattcc
     8221 gtagtaactc gtctgctaac tcttgatact tcagaaaggc agcttcctta tctgaaaaag
     8281 caaagtcggc ttgaatggaa gtttcccatt cctcgaaaaa ccaccaaggc tcgtattctc
     8341 ctttagttag atagacattc cattttgtca tatcaaaaac tcccaacagt aaatatagta
     8401 cacttattat agcataagct ttctggaaat actggaatgc aaatttttga aagtaatgct
     8461 aaaaaaagat acactagtaa taaggaaaaa taaaaggagt tggtttcgtt atggctagag
     8521 atacagcgat tttgagagtg actggatttg tgcaaggtgt tggatttcgt tacacaacca
     8581 aacacgttgc ttacaaatat gacattagtg gaacagtgaa aaatttagat gacggttccg
     8641 ttgaaattca tgcaattgct gaagaagaaa acttaaataa attcattgat gctatcaaaa
     8701 aaggcccatc gcccggttgt cgtatcgaac acgtttatat ttacaaaggt gcccctgtag
     8761 aagaacgaaa aacatttgat atcgtttact aaaattccaa aaatagtagt tgtgctatag
     8821 ctctttttgc attatagtta atgagtacta aaaccttgaa aggagcgact gcgtggcatg
     8881 atttccattt tacaaatttt acttgaacca gaattcattt cactcacagt aacgttttta
     8941 ttaatgttga cgattttcag ttattggtca gccattacat tattaaaacc gaaaatggtg
     9001 ctacccgctg acgctatctg cttaaagcta gtaaaaattt cacttcgagc tcaaatttat
     9061 ataactacgc ctaattttgt tattaattgg ctggctataa ccaggaaatg tagcgccatt
     9121 actgatgatg aagacagttt ttcattttcc aacgtatgaa ttgattattt tactatttag
     9181 gaggaaaatg aaacattgaa aaagaaaaat attattttaa ttagtgtttt acttggtgct
     9241 ttactattac ttacaggttg tagtatggac ccttcacaaa atacagatgg ttttttcagc
     9301 acttatttaa tccaaccatt tactagtttt attatgttcg ttgcaaagtt tgttgggggt
     9361 aattacggaa ttgcgattat tattacaacg ttacttatcc gtgcactaat tatgccacta
     9421 aacttgcgta ctgctaaagc tcaaatggga atgcaatcca aaatggccgt tgccaaacca
     9481 gaaattgatg aaattcaagc tcgactaaaa cgtgcaacat cgaaagaaga acaagccact
     9541 attcaaaaag aaatgatggc cgtctattcc aagtataata tcaatccaat gcaaatgggt
     9601 tgtttaccat tacttattca aatgccaata ttgatggctt tctattatgc tattcgcgga
     9661 tcttccgaaa ttgctagcca cacattctta tggtttaact taggttcacc ggatatggtg
     9721 ctagcaatta tcgccgggct tgtctactta gcacaatact ttgtttccat gattggttat
     9781 tcaccagaac aaaagaaaca aatgaaaatt atcggtttaa tgtctcctat tatgatttta
     9841 ttcgtttcct tcacagctcc ctctgcacta gcgttatact gggctgtcgg cggactcttc
     9901 ttagcaggtc aaacattact aacgaaaaaa ctttacatga ataaacaccc agaaattaaa
     9961 gtaatggagc aagaagaaaa agaattcgag caaatcgtgg aagaacaaaa gaaagaaaaa
    10021 taaaaaaaac cgcaacctcg tcataaggtt gcggtttttt tatttggatt ttggttcaat
    10081 gtaaggaagt gtaattttta tcgttgtacc tttatctggc tcactaaccg cattaatcgt
    10141 tcctaaatat ccttcgacta attgtttagc aatcgcaagt ccgaggccat taccaccttt
    10201 ttcgcggctt ctggctttat ctacacggta gaagcgattg aatattttat caatctcttc
    10261 ttgtgagatg ccttccccgt aatcgcgcac atcaatatgg atttgctttt gttctttata
    10321 gacatgcata tccacttcgg tgccgtcacc tgaatacttc acggcattat ccataataat
    10381 aattaaaatc tgctctaaat gattatgttg aataagtgct cgtaaatcag tatcatcttc
    10441 ttttaaagta aacgtgaaat tttcatacat cacttcaaaa ttacgtctta cttgttctac
    10501 agttgcattt acatcggtaa tttgtaattc ttttgtttgt gaaatttgtt ccgctcttga
    10561 taaatcaagc atttcttgta ctaatttttt catacgttct aattccgtta acgaagcgtt
    10621 taatgattca tcaagtacag ccggatcatc ttttccccaa cgagtgagta attttaaatg
    10681 gccttccata atttgcactg gggtacgtaa ttcatgagaa gcatcctcta cgaattgctt
    10741 ttgctgttca aaactagttt caattcgtgt catcatatca ttaaaaacaa cggtcaattc
    10801 gccaatttca tcgcgggaat tggttttcgt ttcgattcgt ttttggaaac cattttttcg
    10861 aatatcattc attgttcgag ctagacgagt cagtgggttt aagaaatttt gtgctagcaa
    10921 gtagccgagc attccactaa taaagagcgc cactgcccca agtaaaatca tcgtaacgag
    10981 aagccggtcc atcatccgat tataggaagt gagcggattt accacctgcg cgtaaccaat
    11041 cacggtcgta ttgtcgtccg ctacaatggg catttgcgcc gtcatcatct tctgtccgtc
    11101 aatcgttggt ttattcataa taaacttgtc cgtaccacta acaaaatact gcgaaaaatc
    11161 aatgctagta atatcttgac ttcttgaaaa ataatactta ttaataaaat ggccgtcttt
    11221 atcatacaga ttaattactt gatcttgtaa ttttcgattc accgttttat cgttattaaa
    11281 taaatactta atttcctcat tatcggtcaa atcttgattc gttaaagtgc tcgttgttgc
    11341 tagaagcagt tcttttactt ctggttcttc ttcatttaac aacatttgcc caattccttg
    11401 gtaaatggca taggaaaata agaaaaaagt tagaaaaata gctgcactag ctccaaaagt
    11461 ccatttgaat ttcaaagaac gactttttaa ggaaaatggg ctagtcgtca tgtacgcatc
    11521 acataccctg tcccgcgaac tgtttggata taactttctt cgtcaggatg atcaatttta
    11581 tttcgtaagt aacgaacgta cacatccact acatttgttt ctacttctgt ttcataaccc
    11641 catactttat tgagtaacac ttcccgcgta agaacgatat taacattttc cattaacgta
    11701 agtaaaagtt catactctcg ttttgttaag tcaatgattt cttcgtcgcg tttgacaatg
    11761 cgattttcct tttcaacaat tagattacga tactgtagcg ttgtttgttt agcagattgt
    11821 tctgcatttt ccacccgacg caatagcgag cgaaggcgcg caagtaattc ttcaatagcg
    11881 aagggtttga cgatgtaatc atctgctccg tgatccagtc cggatacacg atcgataact
    11941 gagtcacgtg cggttatcat aataatgggt gtttgtttca cttggcgtac acgacgacaa
    12001 acttctacac cgtttaaatg cggcaacatt agatcgagta aaatagcatc ccattcttca
    12061 ttaagtgcga gttctagtcc agcacgtcca tcattagcaa ccgctgtttc ataattttca
    12121 tgttgtaatt cgagttcgat aaagcgtgct aagttttttt catcttctac gattaatatt
    12181 ctattcattt ggcctaaccc tctctttcgg tcattacact atattcctat tactattgta
    12241 acgaacttta gctcaaaaac aactaataac agcgcataaa tagatatttt cactattttt
    12301 tagcacttta ccatgattta ctaattcaaa tctcataaaa aaggcaccca ctcgttaaag
    12361 tggatgcctt atcttccatc aatcttctac ttgtggccat tctgtatgga atacgccagg
    12421 tttgtcgact ctttcatacg tatgagcgcc aaagtagtcg cgttgtgctt ggattagatt
    12481 tgcagataat acttctgaac gatagctatc gtagtagcta attgctgcag tgaatgttgg
    12541 aactggaatt ccagctttta ctgcttctgc aacaactgta cgaaggtcgc cttggtagtt
    12601 atgtgcaata tctttgaaat atggatctaa taataagttt ttaagatttt tatctttatt
    12661 ataagcatca gtaatttttt gtaagaaacg agcacggata atacaaccag cgcggaaaat
    12721 tttcgcaatt tcgccgtatt gtaagtccca atcgttttct tcactagctg ctctcatttg
    12781 tgcaaaacct tgtgcataag atgcgatttt gctgaaataa agcgcacgac gaacagattc
    12841 aacaaatgct tttttgtcgc cttcaaaacg ataattagat gggccagata aaacagtact
    12901 tgcataaacg cgttcatctt taagtgcaga gatgtaacga gcaaatacag attctgtaat
    12961 taaggaaagt ggaacaccta agtcgagtgc gctttggcta gtccatttac cagttccttt
    13021 ttgacctgct ttatcaagga taacatcgac aataggtttg ccagtttctt cgtcttttac
    13081 ttttaggatg tttttagtga tctcgattaa atagctatca agttccccgt tgttccattc
    13141 ttcaaatacg tcagcaagtt catcatggct taatccaccg atttctttca aaatagtgta
    13201 agcttctgcg attaattgca tatcgccgta ttcgatacca ttatgcacca ttttaacgta
    13261 atgtccggca ccgtctgggc caatataagt cacacaaggt tctccgtctg ctactgcagc
    13321 aatttcacgt aaaataggtg ctacaaggtc atatgccttg cgttgaccac ctggcatgat
    13381 agaaggacct tttagtgcac cttcttctcc gcctgataca ccagttccga tgaagttaaa
    13441 tccttcttca cttagttctt tattacgacg aatcgtatct ttgaagaaag cattaccgcc
    13501 atcaattaaa atatcgcctt cgtttaagaa aggtttaact gcttcaatca tcatatctgt
    13561 agcatcgcca gcttttacca taataaggat acggcgaggc acttcaagag attcgacaaa
    13621 ttcctctaaa ctataagttg gtactaattt tttgtccgca ttttcttcca taactgcttt
    13681 cgttttttca gtcgagcggt taaagataga tactgtatga ccgcggcttt caatgtttag
    13741 agccaagtta cgacccataa cgcccattcc tataacgcca atttcttgtt ttgccatttt
    13801 gcacttcttc ctttccggtt tattaaggca gaaaaatctg tcttacttca acatgacaca
    13861 taaaagtatc aacatcattt actatatcaa agaattgctt cttggacaat gaatcaatcc
    13921 gaattatttg actttttttc actaatttag ttttctgaga agaattttct cgttttttgc
    13981 ggattctgct aagtcaatga cgagttgagt aagtttttct aactgctcaa cagatactgt
    14041 ttcttcttct gtgtgcgcat tttcgtatcc agctgataag agcatggtcg gaataccttt
    14101 ttcattcaac acatttgcat ctgttccgcc ttctaaaaat atttctcttg tttccaaaga
    14161 ttgttttttt gcggcttttt gaaaaatatt cattagtgga tgcttagagc gaattcggta
    14221 cccttcataa attaattttg tatcatgcgt caaaagagca ccatatttct cgcaagtttg
    14281 cgcaaatcgt tctctaatgg tctggatatg caaaagcgcc ttacgaaaac ttgctgctga
    14341 tgtaaaaaga acttctaatt gggcatcttg ttgattttca tcatttattc caccagaaaa
    14401 cgactgaatt tcccatttgt tttctcggtc aattctgcct ggccgcgtgg catgtaacgc
    14461 cattctcgct atagaaatcg gtgacatttg ggcagcttca gaacttgcaa tagtaaattc
    14521 taatgcgact aacgtatttg cttgtaattg ataatttccg acttcacctg gtgcatctaa
    14581 acagtatcca taagctgccg taattttttc ttccggaaat aaacgcattc caatcatgcc
    14641 gagttcttct ttcgtcgtga aaataaattc aatctcccca tgagctgttc gttctgcaca
    14701 aaaataatca atagccgcta acatagctgc tactgctgct ttatcatccg cacctaaaga
    14761 agtgccttcc tctaccgtaa atacatcttg ctccatttgg aaaactggcg ttgccgcatt
    14821 tggatgcgta tccacatgac tacagaaaaa aatcgttgga aatttctctt tagtagcagg
    14881 aattcgagca attaaaccat aatcttcatc caaactatat tcaatgttta attttgctag
    14941 atgttttttt atatacgtca aaatagctgt ttctttccct gagacagatg gagtttggat
    15001 taattcggta aaatattttt ttacattgga tatcatcatt tttccaccta cattcttcct
    15061 atttgcctta aaaatcaata aatgacttga aatttacttt aattataagt aagatatata
    15121 tatctgaaat gctttatgag aggagttttc ttccgcatga ctaataaaaa agtagttcgc
    15181 gttgtcgtta ttttaatgct aatcgcgatt gtattatcca gtgttttaac cggggtatta
    15241 atgtttttat aaatatccga cgtctgagcc aatttggttc aggctttttt tattttttct
    15301 caaaaaaaag agcagcaccc gaaagtacta cccaagacat ctagggagtt taggggtatg
    15361 gatctagatg tactaaacaa tacccgctaa acctagatta aaacattttt aatacaatgc
    15421 tgtattttct ttggaaatct tttcgacatt ggctttaatt gcttgtaaga atttacctgc
    15481 tagtaagcca tctaaaatac gatgatcgat ggatagacat aggttcacca tatctcgcac
    15541 ggcaatcata tcgtcaataa tgacaggacg tttaacaatc gattccactt gaagaatagc
    15601 ggcctgaggg tggttaataa tccccattga ttgaacagag ccaaatgaac cagtactatt
    15661 tacagtgaaa gtcccacctt ccatatcagc ttggcttagt ttaccattac gcgcttttcc
    15721 agcaagttcg ctaatttcgc gagcaatgcc tttaatagat ttttcgtccg catttttaat
    15781 aactggaacg tacaataaat caccagctgc aatcgcaatc gaaatattga tattcgcgtg
    15841 ctcgataatt ttatcgcctg cccatgtgct gttaagttgc gggaattctt tcaatgcttg
    15901 tgcaacggct ttgatgaaaa aggcgaaata agttaatgaa taaccttctt cttttttaaa
    15961 gctgtcttta actgcattac gatagcgaac aagaccagta gcatcaactt ccaccatcat
    16021 ccaagcatgc ggaatttctt gtttactcac gctcatatgt ttagcaatgg cttttcttac
    16081 gccattgatt ggtatttctt tatcaccagc tgcagaacga acaggaggag ttggcattgc
    16141 tgctttttct tgtggagcag acttcatttc ctcgcgtttc gctactggac cattttcaat
    16201 gacttgaagt aaatcttttc ttgtaattcg gccaccttta ccagtgcctt ctacagttga
    16261 taaatcaata ttgttttcac ctgcaatacg cagtacagct ggagaaaatc ttccactagc
    16321 tggtgcatct gctagtttca cttgttttgt ttcttgtttt tctggcgctt ttgtttctgt
    16381 ttgttctact tcagctacag gttccgaact tcctgcatct gctgtttcaa ttgtacaaat
    16441 aacttcgcct acttctagag tttcatcttc ctctgctaaa atttctttga tagtgccact
    16501 aaaggatgat ggaatttcag ctgttacttt atctgttaaa acttccgcga tagcatcata
    16561 tttttcgacg gtatcgcctg gtttaactaa ccatgaacta atcgtacctt ctgtaacact
    16621 ttcccctaat ttgggcatgg tgattttttc aactgccaca ggtcttcact cctttatttt
    16681 aaaacgggtc taaaattccg ctaattcttt cattgcatct gccactttat ctggattgat
    16741 cataaagtgt ttttccatcg taggagcaaa aggcattgct ggcgtatctg gtcctgcgag
    16801 tcttgcaatc ggagcgtcta aatcgaatag acaatgttcc gaaataattg ctgccacttc
    16861 actaataata cttccttgct tattatcttc tgttacaaga agtactttac ctgttttttt
    16921 cgttgcttca ataattgctt cttggtctag tggatagatt gtccgtaaat caagaatgtg
    16981 ggcttccaca ccctcagctg ctaaacgttc tgctgcttgt tgggcaaatt gaaccgcaag
    17041 tccgtaagta attactgtaa tatcatcacc ctcacgaacg acatttgctt cgccgattgg
    17101 tacgatataa tctgtttctg gtacttcacc tttcagtaag cgataggcac gtttatgctc
    17161 aaagaaaagt actggatcgt tgtcacgaat cgctgctttt aacagcccct tcgcatcata
    17221 tggtgaggat ggaacaacaa ttttcaaacc tggttgtcca aagaatactt tttcaactga
    17281 ttgagaatga taaagtgccc cgtgtacccc accgccaaaa ggtgcgcgaa taactatcgg
    17341 acaagaccaa tcgttattag aacggtagcg aattctggaa gcttctgaaa taatttggtt
    17401 gacagcaggc ataataaagt ccgcaaattg catttctgca actggacgat agccatacat
    17461 cgccgctcca attcctactc cggcaatagc cgattcagca agtggtgtat cgagtactcg
    17521 gtcttcacca aattcgtcat ataggccagc agtcgcttta aatacgccac cttttttccc
    17581 aacatcttct cctaaaataa atactttatc atcgcgctcc atttcttctt taagcgccat
    17641 ggttattgca tcaatatatg aaatgactgg cattcaaatt ccctcctaat cagctattcg
    17701 cttcttcatc atatacatat agtaaagatg attctggttc agcgtatgct gcactttccg
    17761 cgtaatcagt tgcttcgtta acttctttcg caatactttt ttcgatttca gcgatttttt
    17821 cttctgttaa gtaaccttct tcgagtaatt ctgcttggaa aattttcagt ggatcttttc
    17881 cttttgcttc atctacttct tctctggaac gataactact atcgtcatca tcggaggagt
    17941 gtggtgtgaa gcgataagag actgtctcaa ttaaagtagg tccctcgccg tttcttgcac
    18001 aatctgctgc acgtttaaat gccgcatata cttctcccat attcgttcca tccacacgtt
    18061 caccagggat gccgtaacca attgctcggt cagatagttt ttctgcggca tattgtttcg
    18121 atgctggaac ggaaatagca tattggttat tatgaatcac gaaaacaact ggcaacttat
    18181 gtacagatgc aaagttgatt ccttcgtgga aatcgccttg gttagaagat ccttccccag
    18241 ttgatgcata aatcgcaatt tcgtcaccag ccatttttgc tgcaagacca attcctgctg
    18301 cgtgcgggaa ctgggttgtt acgggtgaac tttgtgtaac gattcggttt gatttttggc
    18361 caaaatgagc tggcatttga cgtccgccag agtttggatc ttccgcttta gcgaacgcgg
    18421 ataacataat atctttcgct gtcatcccga atgctaacac cactgctaaa tcacggtaat
    18481 atggtaatgc ataatcttta tctaaatcaa aggcaaacgc agcgccaatt tgtgccgttt
    18541 cttgtccttg tccagaaatg gtaaaaggaa ttttcccaga acggttcagc aaccacatac
    18601 gttcatccag tcttcttgcc attagcatcg tttcatacat tttaattaat ttatcttctg
    18661 ttaaacctgc ttcttttaaa gtcatttttg ttcctccttt aaagctgtat taaccgtgaa
    18721 ttgcattgcc atccacagca agggcagctt ctctaaaact ttctgataaa gttgggtgcg
    18781 ggtgaatggt gttacccact tcccacggcg ttgcatttaa aacttgtgct aaagcggctt
    18841 cgctaatcat gtccgttacg tgcggtccaa tcatgctaac gcctaggata tcgtctgttt
    18901 ttttatctgc aataatttta atgaagccat ctgactctcc gtaaacgagt gctttcccga
    18961 taccacggaa gaaaaatttg ccttttttca cttcataacc acgttctttt gcttgttctt
    19021 ctgtaatacc gacacttgcg atttctgtag aagtataaat acagcgagga actaagtcgt
    19081 agtcaagttt ttcagccact tttccggcaa tatggttggc tgcaatcgtt ccttcttcca
    19141 tcgcaacgtg cgcaagttgg attgttggaa tgcaatcacc aatcgcgtag atatggcttt
    19201 cttttgtttg ataaaaatca tttacttgga taaaaccgtt ttcggtcgcg atatccgtgt
    19261 tttgcaaacc gatattttct gtattagctg aacgaccgac agaaacgaga attttgtctg
    19321 ctgcgaaagt ttgctcttcg cctttaataa ttgctttaat ttccacacca gtatccgttt
    19381 ttttataact agctgcttga acttcagcag atgtatgcat gattaatttt ttctttttat
    19441 aaagtcttgc taattcttta gctacttctt tatcttctgt tggcaaaatt cgatctgcat
    19501 attctagcac ggtaacttct acgccaaaat catgcatcat cgaagcccat tccatcccga
    19561 taactccacc gccaacgata ataattgatt ttggtaaagt ttctaggttt agcgcaccgt
    19621 cagatgataa aacattttct tcatcaatgc ttaaaccatt taatgtgcgc ggtttggagc
    19681 ctgtcgcgat aattaaattt ttaggaatga gcatttcatt ttcagagcca tcttcaaatt
    19741 cgactgaaac tgttccagct gttggtgaaa aaatagatgg tcctaaaata gttcccgttc
    19801 caacaaacaa gtcaattttc ccttgtttaa ataattggtg aatacctttt tctaattgat
    19861 ctacgattgc ttgttttctt tcttgtgctt gtaaaaaatt gattccggca gttccttcta
    19921 cagaaatacc aaattcactt gcttttttta ctgtttgcag aacttccgct gaacgtaata
    19981 acgctttcgt tggaatacat ccacgatgaa gacacgttcc accaactttc cctttttcaa
    20041 cgacggctac tttctggcca ttcttagctg cttgaattgc tgcgacgtaa ccgccagttc
    20101 ctccgccaag aataacgaca tcatattctg ttgccacatt atctcctcct tttagtactc
    20161 tttttctttc tcaagaccag cgagcacacg ttgcacaccg ctatttaatg cttctaattc
    20221 gtcttctccg ggttctataa tcacactggt tatccagttt gtttgctcaa taattttgtt
    20281 tgtaaaaagt tcacttctag caaggccacc agttaaaatt atggcgtcaa ctttaccttg
    20341 caatacaacg gaacatgcgc caatttcttt gctaacttga taagccattg catcaaaagc
    20401 ttcgatagct ttcacgtcac ctgcttgtac tttagcttcc acctcgagca tgctgttagt
    20461 tcctaaatat gaaatcatcc caccacgacc aacaatcagt tcatgcaatt cgcgttttgt
    20521 ccatttaccg ctaaaacatg cttctagaaa atcattcatc ggtaaagaac cagaacgttc
    20581 cggactaaaa gggccgtccc catctaaggc attattcaca tccaccgctt ttccttgtcg
    20641 atgagcggca actgaaattc caccgccaag atgcgcgata acaaaattca ttttttcata
    20701 atcttttcct agctctttgg ctattttccg acctgctgct ttatgattta atgcatgaaa
    20761 aatacttttt ctagcaatga aggcattgcc agatatcctt gcaatttcct gcatttcatc
    20821 cacgacaacc ggatccacaa taaaactagg tattgtcagt tcatctgcta atttttttgc
    20881 aagcagtgcc cctaaatttg aggcatgctc tccgtattta ttttctttta agtcatctat
    20941 cattttttct gtaaccatat atgtaccgcc ggcaactggt cgaagtaagc cccctcttcc
    21001 aactaccgct tgtaatttct ttacatcata accatatgca tccatcactc gacgtagaac
    21061 ttgccaccta aaatcaaatt gttcctgtac gttattaaag tcggctagtt cttgcattgt
    21121 atgtctgaca gtttcttcaa aaagtacttt atcgccttgg taaacagcga gtttggtaga
    21181 cgtggaacca ggatttatgg ttaaaacatc aaaagacatt tgctttcctc caaatttaat
    21241 tgtgaaaaat gcggtaggtt atcattttcc catggactat tgtaacacgt aggctgtaat
    21301 caaataaaag cctttgcatt cagattgtta aagtccgtct attcacatta tttcatcatt
    21361 tctcaactag tcttacagtt agtatgaatg aagctaattt gttttccggt gaatcatttc
    21421 ttgaggaaat gacaataggt acttttgccc cgaccactgc actacctact ttagctccag
    21481 caaagtagac taatgattta taaagtgcat ttcctgtttc aatattagga gcaattaata
    21541 tgtctgcttc tcccgctgaa ctatccgtaa ttcctttatg gagagccgct tctttggaaa
    21601 tagctacatc gagagctagc ggacccgaga cggctattgt gttatcaaaa tgctgcacta
    21661 cttcctgtgc ttctactgtg gatggcattt ttgctgtcac ttcttccacc gcactaagta
    21721 acgcaatttt aggattagcg atgccgattt gatgcgctac ggctatggca ttttctgtga
    21781 tagcaatttt ctcttttgtt tttggcgcta cgttcatggc acaatcagtt atcaataatg
    21841 gtttgtgata cgttggaata tcaaaaatgg caatttgact caataattgg tctgtacgaa
    21901 ggccattttc tttttttaat acgtgatgca tcaatgtggc ggttggaatg aatcctttta
    21961 ctaaaatatc tgcttcttta ttttttaccg ctaaaatggc gccttgtgct gcggcttcag
    22021 cggtatctgt ttgaatccat gtaacgtttt cattcgcggt taacgttttg tcttccttct
    22081 tgccaaataa aagaaattta cctaaatttt ggtttaatgc aagacgaatc gtttcgagca
    22141 caacttcatc atctgctcct gctacggcga aaacaaatga acttgtttct attacatctg
    22201 aaaaaaatct actttttgtc ataaaaataa ctcctttatc gcacaaaaaa gccgcattcc
    22261 gaattagtag ttgtttttat gaccaggtaa taattttcta ccttattcat tttaagcaaa
    22321 aactattcga tatgcaagca atttcgtttt tttaatacgt ttgttttact ttttccgctt
    22381 gttcaatcat ttcttttgca tgttgtttgg ttaattcggt gacttctatt ccagcaatca
    22441 ttcgactgat ttcttctact ttctcttccc ctttaagcac tgtaacggaa gttgttgtcc
    22501 gtttgttttg gacttttttc gtaatgtagt agtgatggtt cgccattgct gcaacttgag
    22561 gtaagtgact aatgcatagt acttgcgagc caactgaaac agcataaatt ttttctgcaa
    22621 tcgcttgacc aacgcgacca cttacaccag tatctacttc atcgaaaata atcgaggtga
    22681 taccttggtg cctagaaaaa atggttttta atgctaacat cattctagat aactctccac
    22741 cagaagcgat ttttgctaat ggttttaaag gttcacccgg gtttgttgac atatagaaaa
    22801 cgacgctatc ttgccctgaa tctgttagtt ccattttgtt tgcttcgaag cgtacactaa
    22861 aaatggcttt ctccatatat aagtgattta attcttgttt gatttgtttt tctaatgtaa
    22921 cagccgcttt tttacggatt tccgttagtg tatttgcttg ttttgttagt tctgctttaa
    22981 gtgttgctaa tttggtctct aaatgcccga catgtgattc actatctgtc agtttttcca
    23041 tttcgctgct tatttcttgt tcgtattgaa tgatatcttc aattgtttta ccatatttgc
    23101 gttttaattg gtttaaatca ttcaaacgtg attcaatttg attcagttct tctggttgga
    23161 attcgagctg atctagtgat tgcctaattt ggctcatgct atcttctaac atatagtaac
    23221 tagaagaaat ggcctcacta accgctttat aatccgtatg aatactcgcc gctgcctcca
    23281 tttgacgcat tgcttctcca acaaattcca gcccaccagg ctcaccttga atcgcggcat
    23341 aagctccttg taaattttcg ttaagttttt caaaattggc taagatattt ttttgttcta
    23401 acaagcgatc ttcttcacca gcttgcaaat tggcattttc aatttcctgt tgttgaaaac
    23461 ggagcatatc cagacgttgc gctaattccc gctcattttt cgtccaattt tgccactctt
    23521 tctcgattgt ttgatattct ttgaaattag tttggtactt ggttagtgct ggcttgattt
    23581 tgtcagaagc gaaacgatca agtaatgaca aatgaaactc ctcattcatc aattcctgat
    23641 gttcatgctg actatggata tctattaatt tcgagccaat ttggcgcaag agaacggtag
    23701 ttacaagttt gccattaatt cggcaactat ttttccccga gcgaaacagg ctgcgttcta
    23761 gtacaaccat atcatccgaa gcatctatcc cattttcaat taacgcattt cggcaagcaa
    23821 ggttatcctc tgctagcgca aaaagccctt gaagttctaa acgttcttct ccatgacgga
    23881 taaaatcagc tgatccgcgt ccgccaacaa gaagaccaag cgcatcaata ataattgatt
    23941 taccagcgcc ggtctccccc gtaagtaccg tcatcccttc ttgaaaagtt aaagaaagcg
    24001 attcgatgat agcaaagttt ttaattgtca tttcttgaag caaaatcttt cacctccaac
    24061 aaattttaaa gcatatctat aaaacgatct gttaatgttt tcgcattttc ttccgagcga
    24121 caaataatta aacaagtgtc atctccacaa atagttccgg ctttttccgg ccagtccaag
    24181 ttatcgatta atgcaccaac cgagtttcca tttcctggca ttacttttaa aataatcata
    24241 aattgcacgt tatcaatgcc aataaagcaa tcaatcaaag cgcgttttaa tttttgatgt
    24301 gggttaaaac tattatcggc aggtagactg tatttgtaac cacctgtttg tgttggaact
    24361 ttgacaagat gaagttcttt aatatcacgg gaaacagttg cctgggtgac tttaacatcg
    24421 cgttctaaca gaagttctac taaatcttct tgcgtgtcaa tctcattgga tgtaatcaat
    24481 tctcgaataa taatatgacg atgaccttta ttcattcctt cttcacctca cgataatttt
    24541 ctacttacat cttatccgaa aaaacgcata aagtcacgga tttagtgcaa atttatgcaa
    24601 gaaaagtttc tttaatactt tatacatagg taatacattg caaaatgagc caaaacagca
    24661 tgataaaagc aaaaaccgga aaacatcact gctttccggt atacattatt tatctaattt
    24721 tgtatgtgct tttgtgataa gtttcgcaat cgcatttggt tccaaatgat tagttccagt
    24781 ttccccacca gtccatttaa gatgcgcgat aaattcgatg tttccttctc cacctgtaat
    24841 aggtgaaaaa tcaagtccca tcaaatcata accattatcg agcgcaaatt gaacaatatg
    24901 ttcaactacc gattcatgta ctgctggatc acgaataatc ccttttttac cgacttgctc
    24961 tcggcctgct tcaaattgtg gtttgataag tgtcatcaca tcgccaccgg ttacaagcac
    25021 agttctaagt actggtaaaa ttagtttgag tgaaataaag gatacatcaa tcgttgcaaa
    25081 atctgctaaa ccttcggaaa aatcagctgg cgttacatga cggaaattag ttctttccat
    25141 cacagtgacg cgatcatcgt tgcgcagttt ccatgcaagc tgattatagc caacatcgag
    25201 cgcataagag tgtcttgccc cattttgtaa agcgcagtct gtaaaaccac cagttgatgc
    25261 tccgatatcc agcataagtt tatctttcac ttcgaaatca aatacttgca atgctttttc
    25321 tagctttaat ccaccgcgac taacataagg catttgcttt ccttttactt gaagttcgct
    25381 atcaataggg attttttctc caggtttatc tacacgttct tctttccgat aaacaattcc
    25441 cgccataatt gcacgttttg ccttttctct tgtttcaaat agtccttgtt ctactagcag
    25501 aatatctgcg cgttcttttt ttattgtcat agtctcttcg cccttaactt cccgctttgt
    25561 gcgagcattt cttttatttt taatactatt ccagttgttg atatgccaaa tgattccaaa
    25621 attatggata cagaaccatg gctaataaat tcgtctggta aaccgattcg atgcattaca
    25681 acatcgctat aattactcgc ttctataaat tctaacacac tcgcaccaaa tccacctttt
    25741 aatagtgatt cttctactgt taaaatggga attttttgct ttaagatttg gtgtaaaagt
    25801 gcttcgtcta acggtttaat atagcgcgca ttaattactc caacgtggta tccttctaac
    25861 tctaattgtt cagctgcttt tagcgctagc cggatggtag ggccaaaggt taaaataaca
    25921 gcatcaatcg gctgaatgat tgtttcccac tttccgattg gtataagcgt attagactca
    25981 gctacctgcg caccaggagc ttcgccgcgt ggatagcgaa tcgcaaaggg cccatcatta
    26041 tacgaaaacg cagtatccat taattgtcta gcttccactt catctttcgg catgctaata
    26101 gtcatgtttg gaatactatt taaaaatgaa atatcaaaga taccttgatg tgtttcgcca
    26161 tcagcgccaa caagcccggc ccggtcaatc ccaatgacca cattcaactt ttgccggcaa
    26221 acatcatgaa ctaactgatc ataggctctt tgtaaaaaag tggaataaat agtaaggaac
    26281 ggtttcatcc cttgtgttgc tagccccgct gccattgttg tcgcatgctg ttccgcaatc
    26341 ccaacatcaa aaaagcgttc tgggaaagct ttcgcaaatt tttctaattt agagccaaca
    26401 ggcattgccg gagttatcgc aacaatccgt tcatcctttt ctgccaaacg tattaattca
    26461 ttgctaataa ctgaactcca tgacgctgca cgcttagccg gcttaataaa gctacctgtt
    26521 tcgactttat aaggtcctgt accatgccag gtgccacgag agtctaattc ggccggttga
    26581 taccctttgc ctttttttgt aacgatatgg agcagtacag gcccttttgt gcgttttgct
    26641 aattccaagt tagtaataac ctcttctata tcatgcccat taattgggcc caaatacata
    26701 aacccaagct cttcaaaaaa agtaccatcg actttagctt ttgtttgctt aaatgtatca
    26761 gaggtcctta attttccaag tatgttgtgg attgctccca cgtttggcgc tatcgacata
    26821 tcattatcat ttaaaataac tatcatatct tttcccatat cgcctatatg attcaaagcc
    26881 tctaaagcca tgccacctgt taaggcgcca tcaccgatta tcggaataac ataaaattct
    26941 tcctttttaa tatctctcgc aataaccatc ccggctgcag cagacaaaga agttgagctg
    27001 tgccccgttt caaatacatc atgaatagat tctttccgct ttggaaatcc atctaatccc
    27061 ccgtgctcac gtaaagtacc aaattggctc gcccttccag ttaggatttt gtgcacatat
    27121 gactggtgac caacatccca aataaattta tcttttggac tattaaaaga ataatgcaac
    27181 gcaatcgtta gttctaccac accaagattc ggaccaatat gcccacctga tttagaagta
    27241 gaagtaatta aaaaagcgcg aatatctgcc gcaagtgctt ctaattcttg tatatccaat
    27301 tgcttcataa aggaaggatc ctttattttt aaaagatcca aataaaaaca actcactttc
    27361 caaagagcca cttgcatgaa tgtgtgcaag gtcttttttc tcaattaatt gttcttatta
    27421 tagcaaacaa tcaccattaa accaaacaag gtaaaataat tttaggcaaa taaaaaagca
    27481 aatcaccgaa atgatttgct ttttcttatt caaaaaatag aattacgctt tttgaacgtt
    27541 agctgcttga ggtccgcgtt ggccttcttc aacgtcgaaa gttactgctt gaccttcgtc
    27601 taaagatttg aatccgtcgc cttggatagc gctgaaatgt acgaatacat cgtcaccgtt
    27661 ttcgcgttcg ataaaaccaa atcctttttc tgcgttaaac cattttactg taccttgttc
    27721 catgttcatg ttcctcctcg tgtgttatgc acactaatta tttactattc ttgcttaacg
    27781 gcacgagatg gaaagttgtt cacaatcgta tctttcaccc acaaaaataa tcttacatta
    27841 gtataacacg gtattttagg aaaagcaaat caatttgaat tatatatgtg aaaaaaattt
    27901 gaaattacta gataattatg attaattttc tctaagtgcg attaaatcag caagtttcaa
    27961 gagaatttca tcatcaaaat catgccctga aagcgctgac tttgcaatcg caacatgctc
    28021 atttaatgcc cttttggcac catcaagcgt gagtaatccg ggataggtac ttttgttcag
    28081 aaaagcgtcg acccctgtct ttttacccat ttttgtttca tcaccaataa catctaaaat
    28141 atcgtcactg atttggaatc caatcccaat attttccgca aaaatccgta atcttttcgt
    28201 ttgttctggg tcagcttctg caattttcgc agcagaagtt acggcaaaaa ttaataattc
    28261 gcctgttttc cgtgcatgga tggatgatag ttcttctaat gtcacttgtt tgttttctgc
    28321 ctccatatct gcaagttgac cgccaaccat tccttctgca ccactactaa aactaatttg
    28381 attaatcaaa gctatgcgtg tttcaaaaga taaattttcg tcttccgcta aaatagaaaa
    28441 agcaagcgtt agtaaagcgt ctcctgccaa aatcgcagtt gcatccccaa aaactttatg
    28501 attagtatat ttgccgcgac gatagtcatc attatccatt gctggtaaat catcatggat
    28561 caggctatac gtatgaatca tttctaacgc cgttgctgtt ttcacaccta aaagcggatt
    28621 tacttttaag gcttgaagtg tagcaaaaac tagcatggga cgaatccgtt ttccacctgc
    28681 ttgaacagaa tataacatgg actcttttag tctaggttcg atatttcgct cgcttatttc
    28741 tttaaaaagc gactcatcaa tcactttttt atattgttct agaaaaaggg ttaaatcttg
    28801 caaatttatt caccatccgc ttcaaaagga atttcttctc ctgcatctgt gactactttt
    28861 gccattcgtt tttctgctga ttgtaattta tcttggcaca attttgttag ttcgattcct
    28921 ttttggtaca tatcgagaga atcttcaagt gaggcactac cattttcgag tgcttctacg
    28981 attgtttcta attctgcaat tgcttcttca aaagttttct ttttagttgc cacttatatc
    29041 ttcctccttc gcggtaatga gtgcctctat ctgtccgcct tgcattttca cttggatatt
    29101 atcgccgact tcaagctcct gcactgattt aaccagcata ttctctttat acgttacacc
    29161 aaatcctcgt ttcaataaag aaagaggact cagatgttct agcgcatcta tttgccgaaa
    29221 gaaagattgt tgtttgtctt tcaaaagttg tttcatcgct ttttctaatg cttgaagtcg
    29281 tagtgccatc tgttcttttt gtagttcaat ttctttattc ggatggtaat aatgtagccg
    29341 atcatttaat cggtcaaaaa ctgtttgctt aacaaatatt tgtttagaaa aagcattatt
    29401 taatcgttcg gaaaaataat ctgtacgttc catttgctgt tctaattgat gtttcggacc
    29461 atttaaaatc aagtgttgtt taagttgctc tagtgaccgt tcttttcttt ctaattcttg
    29521 tctggtgact gcgagcaaac ggtatttacg ttctgctaat cgttcttcta aatcgcgata
    29581 atctggaaca gcaagttctg ccgccgcagt tggcgttgcg gctcgtacat ctgcagaaaa
    29641 atcacttaac gcaaaatcag tttcatgtcc gaccgctgaa attacaggta catcggaatc
    29701 atatactgct cgaacaacag gttcttcatt aaaagcccat agttcttcaa gcgaaccacc
    29761 accacgccca ataatcataa catcaatatc atttcgctga ttaatcttgc caatgttttc
    29821 gacaattttt tgagccgctt tctccccttg aacaatagtt ggataaacaa tcacttccac
    29881 agaaggcatt cttcgatgaa tggtggttag tatatcacga acagccgcac cagttttgga
    29941 cgtaacgaca gcgactttgg acgggaaaga aggaagcact tttttatgcg tttccgcaaa
    30001 aagcccttcc ttttccaatt gcgattttaa ttgctctaat tgaatataaa gcgctccgac
    30061 accatctggt tccatatgtt ctgcatagaa ctgatagcga ccagcttttg taaatacgcc
    30121 aattcgtcct gtgataagga cattcatacc atcttctggg acaaaaccaa ttttttgaac
    30181 tgctttgtga aacatgacag aacgaagcat cgcaaattca tcttttaccg taaaatatag
    30241 atgtccactc gctggttgtt ttaaattaga aatttcaccg cgcacaaaaa cttgcttcat
    30301 gtagggatct acttcaaact ttttttcgat atatttggtt attgctgcta ccgtcaaata
    30361 tttatcttgc tccatcattt cacatccaat taatcaattc attttccaaa tgcgttttgc
    30421 tgcttttaat gtgttcgcaa gtagcattgt gattgtcatc gggccaacgc cacctggtac
    30481 cggcgtgata aatcctgctt cttctaccac atcatcaaag tccacatcac cgcatagctt
    30541 attattttcg tcgcgatcca tgccaacatc aataacaatc gcgcctggtt tgatataatc
    30601 ttttttcacg aatttcgcta ggcctgtcgc tacaacaaga atatctgctt ctttcgctac
    30661 ttgaggtaaa tcttttgtac ggctatgcgc aatggttact gtcgcgtttt catttaacag
    30721 taattgagct actggtttcc ctacgatgtt acttctacca ataacaacag cgcgtttgcc
    30781 ttctatttga gtgccggtcg attttataag ttcaataatt cctgctggtg tacaaggaac
    30841 aaaagaatct tttccgatga ataaattacc tacattcact ggatggaaac cgtcaacatc
    30901 tttgtcatag ctaatagtat caattacttt ttcttctgaa atgtgttctg gtagtggtaa
    30961 ctgcacgagt atgccatgaa tagttttatc ttcgttaagc tcctctacaa cagatagtaa
    31021 tttttcttct gttacatttt ctggaagttc aattaaaacg gatttcatcc ccgcttcttc
    31081 tgtccgtttt tgtttatttc ttacatatgt acgagatgct tgattgtcgc caacgagcac
    31141 aacagcaagc cctggtttct taccttcttt tactaattca gctacttctc ttgttacttt
    31201 ttcttgaatt tcttttgcta actttttgcc atcaataatt tctcccatga gtattgcccc
    31261 cttaaaaata ctttccacgt aattattctt aaaaaaatca cgaaataagg gagtgcaaga
    31321 gatttccctt gcactcaatc aagcttattt atcttccggt gcaatattag caagtacgcc
    31381 attaataaat ttacttgatt tttcatcact gtaaattttt gcaatttcga tggattcatt
    31441 caaactaact ctatttggca catcatccaa gtacttaatt tcatagacac ttagtcgaag
    31501 taaggataga tcgactttac tcaaacgatc catgcgccaa ttatctaaat taggctcaat
    31561 gatagcatca atttcagctt tattcgccat tacgccttcg actaattttt ccatatagtc
    31621 gtcttgctcg tcttccatga tgtttttaat agcttgatct agcgacattt cgtttagctc
    31681 tatttggaat agtgcttgaa gtgctttctc gcgcgcttct cttcttttca tgttaaagct
    31741 gctccttttg ttccttgaat tttatagctc aaaatcatcg aaggaaagtg tttctgtttt
    31801 ttcaaattgt acaccaacga tatgaacgtt gatttcaagt acatttaaac cagtcatatt
    31861 aaaaatggta tctctgacag catcttgaat attttgagca acaagtggaa tagttgcgcc
    31921 aaataagact gaacaataaa gttcgattag aattccttct tcggttagtt ctacttttac
    31981 gcccttacgg tagtttacag caccactgaa tttctcacgc atttctgttg caaagccacc
    32041 ttgcatataa gcaacatttt caatttcact tgcggcaagt ccagcaatta cgccgattac
    32101 ttcaggtgca atctcaattt tgccaagcgg tgcatcattt tgtttacgca aatcttttgt
    32161 ataagccatt atttagccct ccttagaaag attcattaca tcgttttgct ccaagaattt
    32221 ggtattgaag tcgcctgata aaaacacatc attatctaat acacgtaaat ggaacggaat
    32281 cgttgaagga atgccatcaa tggcaaattc ggacaacgca cgtttcattt tttgaatcac
    32341 ttcttcccgt gtttccgcat aacagattac tttggcaatc atcgaatcat agtatggtgg
    32401 gattttgtag tttggatatg ctgctgagtc aattcgaaca cctaagccac ctggaggaag
    32461 ataaaattta atttcacctg gagctggcat aaagtttttc tctggatttt cagcgttaat
    32521 tcgacattcc atcgcccaac ctgttaattt cacatctgct tgtttaattt gtagttcttc
    32581 cccagaagca actagaaatt gttgtttcac taaatcaaca ccagtaacaa gctcggttac
    32641 cgggtgttct acttggatac gcgtattcat ttccataaag taaaaattat tttcatggtg
    32701 atcgaaaatg aattcaatcg ttcctgcgcc agaataattc acggctttgg cagctttaac
    32761 agcagctttc cccatttttt ggcgagtttt ttcatcaatg gcaggtgatg gtgattcttc
    32821 aattagcttt tgtaagcgac gttgaatact acaatcacgt tctcctaaat gaataacgtt
    32881 accatggtta tcagcaagca cttgaatttc tacatggcgg aaatcttgaa tatacttttc
    32941 taagtaaacg ccaggatcac caaatgcggc ttcggcttct tgttgggtag tttgaatgcc
    33001 agaaattaat ttttcttcat tttctgctac acggatacct ttaccgccac cgccagctgt
    33061 tgctttaatg ataaccggat aaccgatttt cttagcgatt tttttgccat cttctacatc
    33121 cttaacgatt ccctgcgaac caggaacgat tggaacacct gctttacgca tcgtttcgcg
    33181 ggctacatct tttgttccca tttgcgaaat agcggaagca cttggtccga taaaagtaat
    33241 attacagtct tcgcataact ccgcgaaatc tgcattttcg gctaagaaac catagcctgg
    33301 gtgaatagca tcacagttcg ttaaaactgc aagactaata atgttggaca tatttaaata
    33361 actatctttt gttgccgcgg gacctacaca ataagcttca tccgccagct gaatatgtag
    33421 cgcttcttta tctgcttccg aataaatcgc cactgtctcc actccaagtt cttttgcagc
    33481 gcgaatgata cggacagcga tttctccacg gttcgctacc agtacttttt taatcatgtt
    33541 tttcgacccc ttattttttt ctaactttga atagtggttg tccaaattcg actaattcgc
    33601 cacttgaaac aagaatttct gcgatttctc cgtcaatatc agcagtaatt tcattgaata
    33661 atttcattgc ttctacaata catacaacag attgcgcaga tactttagat ccaacgctaa
    33721 caaaattagc atcttctggt gaagcagatg cgtaaaaagt cccaaccatt ggcgatgtaa
    33781 tgacttctaa actagcatct tccgctgtat ttgcttctgt ttgaggagca gctgtttgag
    33841 cttgtgctac tggtgctgcc tgagctggtg cttgtgtgat agcaattggt gcttcttgaa
    33901 ctgctgcagc aacaaccgtt ttattctttt taagcaaaat cttactatct ttcgtttcta
    33961 actcaaattc atctagggtt gactcgtcaa tcagctcgat tagctgttta atttcatcta
    34021 ttgataacat accatttaca ctccttaata atactaaaaa taaaaaattg catgaatcac
    34081 gcattgtcct tattgtacca tactttttat tcaaaaggtg tactggaagc gctaagaaat
    34141 agaaaaacag ctgaagaatt aactccagct gtagtaaacg attcttgctt acgcccgaga
    34201 aacatacgct gcttcggttg tattaattac tagtttgtct ccttcattaa cgaaaaatgg
    34261 cacttggaca acaagaccag tttcaagagt ggctggttta gaaccgcctg aagaagtatc
    34321 acctttaatt ccaggatcag ttgcagtaac aactaattct actgtgttag gtaaatcaat
    34381 accgattgtt tcgccttgat acatgataat attaatttcc atattttctt ttaggaattt
    34441 aagttcatga gcaatttggt cttctggaag ctcaatttgt tcataagact cattatccat
    34501 gaatacgtga tttgtgccgt cagcatacaa gtaggccatt ttacggttgt cgatttgcgc
    34561 ttttgctact ttttcgccac cacggaatgt tttttcttgg attgcacctg tacgaaggtt
    34621 acgtaatttg gaacgaacga atgctgctcc ttttccgggt tttacatgtt gaaaatctag
    34681 cacacgccaa ataccattat ctacttctat tgttaaccct gttttaaagt catttactga
    34741 aatcatgttt ttcctcctgt aatttgcaaa gtatctttat ttggagcata ttaaaactgc
    34801 tcattcttcc ttatttaacc ataaaacaca caaagttaca aaggaatttt ataaaataat
    34861 taattctttt ggtgaatgaa ttaaaatctc attacctgtt tctgtaatta agagatcatc
    34921 ttcaattcta acgccaccga ttcctggtaa ataaattcct ggttcatccg tcacaacatg
    34981 tccgacttct agtttttgag ggctcttaaa ggataaatta ggtccttcgt gaatttctag
    35041 tccaatacca tgtcctaaag aatgtccaaa tgcatcgcca tagccaaaag aagaaatata
    35101 atcacgtgca atagcatctg cttcaattcc agtcatacct ggttttaagc tatcaattac
    35161 ctttaattgc gcatctaacg taatttggta aatttctttt aatttttcag caggttcacc
    35221 gaccgcgata gttcttgtca tatctgaaca ataaccgtca taataacagc cgtaatccat
    35281 tgtaacgaaa tcgccaactt cgattttttt atcagaagca acaccatgcg gtaacgcaga
    35341 acgaacacca gatgcgacaa ttgtatcaaa cgacgaggaa gtagctcccg cacgtctcat
    35401 aaagaattct agttcattag atacttcgat ttcagccatg cctggtttga taaattgaat
    35461 gatatgtgca aaagctgcat cagcaatatc acaagctgtg cggattgctt ttagttcact
    35521 tgctgttttc actttacgca tttcttcaaa gaagccagta agtgggatta attgacgatt
    35581 aaatacgcgc tccatttgtt taaattcaga tacggtcaca taatccgctt caaaatgtag
    35641 tgtttttgta tcatttttaa ttaataaatc ttctactgta tcaaaaatcg gaccagtatg
    35701 ttgtacaatt tcgtatcctt ctgcttgttt tgctgcttgt tccgtatatc tgaaatcagt
    35761 tacaaaataa gctttttcag gtaaaattag cgccacacca cttgttccag tgaaacctga
    35821 tacatacctt ctattaaact cacttgtgac aagaacggct tctatctttt ccttgcccag
    35881 cgtttcttga attttagtta atttagacat ttttattccc ccacttttat caaattttag
    35941 gcgcgcaaaa atcgcattat tagacgcgtt cgaaactatt ttatcacaat ttagaaaaaa
    36001 taactttttt taggcgtttt gcgctatacg aaaaactatt tttagcgtaa aataacatat
    36061 tagtaaacat gaataggctg gtgaaaactt tgagcaaaca aaacgtgcca tcatatggcg
    36121 gtcaagctgt agttgaaggc gtcatgtttg gcggcagaaa acagaccgta acagcaatta
    36181 gacgtataga tggttcatta gaatattttt atttagaaaa aaatagtccg gtttgggtta
    36241 tgcgtatgaa gaaaatccct tttttaagag gaattgttgc attaattgaa tctagcgcta
    36301 tcggttccaa acacctcgct tttgcaacag accgatatga tgaagatcca aataatccag
    36361 tagaagaaga aaaaattgaa aagaaagaat cgaaagtcgc gatgtggctt ggtgttgctg
    36421 tcatcggtat tttatctttc gtctttgcaa aatttgtcat gacgctcatc cctgtatttt
    36481 tagcggaatt attccgtcct atcgtaccag gtgatacggc gcaagtattt ttagagagtc
    36541 ttttcaaatt aattcttcta ttaacctata ttttcgcggt ttctcagacc cctattatta
    36601 aacgagtttt tcaatatcac ggttctgagc ataaggtaat aaattgttac gaagaaaatt
    36661 tacctttaac ggttgaaaat gtacagaaac
//
LOCUS       DASDYK010000013        36057 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.013, whole genome shotgun sequence.
ACCESSION   DASDYK010000013 DASDYK010000000
VERSION     DASDYK010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 36057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36057
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.013"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            14..259
                     /locus_tag="U0308_000724"
     CDS             14..259
                     /locus_tag="U0308_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315713.1"
                     /translation="MVIVLLYNAKRIETVFLCLLLSENAVENQAFAIDFGKIEDIDVA
                     FKNTKRYKLFPSCTDTFKENYFLGSFSNMKSAFFLSK"
     gene            505..4059
                     /gene="rpoB"
                     /locus_tag="U0308_000725"
     CDS             505..4059
                     /gene="rpoB"
                     /locus_tag="U0308_000725"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEM2315714.1"
                     /translation="MSGHSGHDVKYGRHRTRRSFARISEVLELPNLIEIQTASYQWFL
                     DEGLREMFRDISPIEDFAGNLSLEFIDYDLGEPKYSVEESKNRDANYAAPLRVKLRLI
                     NKETGEVKDQEVFMGDFPLMTEMGTFIINGAERVIVSQLVRSPGVYFNGKLDKNGKKG
                     FGSTVIPNRGAWLEYETDAKDVVHVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDND
                     YLRNTLEKDNTDNAEKALLEIYERLRPGEPPTVDNARSLLVSRFFDPKRYDLASVGRY
                     KINKKLHLKNRLFNQTLAETLVDPETGEIIASKGDILDRRNLDQIIPNLENGVGFRTL
                     RPTDGVMEDSVLVQSIKIYAPNDDEKEINIIGNAYIEENVKHITPSDIISSISYFFNL
                     LHGVGDTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDMTTITPQQLI
                     NIRPVVASIKEFFGSSQLSQFMDQTNPLGELTHKRRLSALGPGGLTRERAGYEVRDVH
                     YSHYGRMCPIETPEGPNIGLINSLSSFAKVNKFGFIETPYRRVDPETNRVTDKIDYLT
                     ADEEDNYVVAQANSKLDEQGTFTEEEVMARFRSENLAVEKERIDYMDVSPKQVVSVAT
                     ACIPFLENDDSNRALMGANMQRQAVPLMHPEAPFVGTGMEHVSAKDSGAAVTAKHDGI
                     VEHVEAREIWVRRVSLVDGKEVTGGIDKYTLRKFVRSNQGTCYNQRPNVAEGDRVVKG
                     EILGNGPSMDSGELALGRNVLVAFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEFES
                     EARDTKLGPEEMTRDIPNVGEDALRDLDERGIIRVGAEVKDNDLLVGKVTPKGVTELT
                     AEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKIFTREAGDELPPGVNQLVRVYI
                     VQKRKIHEGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNPLGVPSRMNIGQV
                     LELHLGMAARALGIHVATPVFDGANEEDVWSTVEEAGMARDAKTILYDGRSGEAFDNR
                     ISVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYG
                     AAYTLQEILTIKSDDVVGRVKTYEAIVKGESVPEPGVPESFKVLIKELQSLGMDVKML
                     SADEEEIEMRDMDDDDFTNQNDAFNIVQPENTAAEKTE"
     gene            4230..7835
                     /gene="rpoC"
                     /locus_tag="U0308_000726"
     CDS             4230..7835
                     /gene="rpoC"
                     /locus_tag="U0308_000726"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEM2315715.1"
                     /translation="MLDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPERD
                     GLFCERIFGPMKDWECSCGKYKRVRYKGVVCDRCGVEVTKSKVRRERMGHIELAAPVS
                     HIWYFKGIPSRMGLVMDMSPRALEEIIYFASYVVTEPGDTPLEKKQLLSEREYRVYRE
                     KYGKGFSAGMGAEAIKKILADIDLEKETNDLKEELKSAQGQRRTRAIRRLEVMEAFRN
                     SGNNPSWMVLDVLPVIPPEIRPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLGA
                     PNIIVQNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGK
                     RVDYSGRSVIVVGPNLKMYQCGLPKEMALELFKPFVMKELVGRGLAHNIKSAKRKIER
                     MAPEIWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVCTAYNADF
                     DGDQMAVHVPLSAEAQAEARILMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLEREN
                     AVGEGTIFKDINEAQLAYQNGYVHLHSRIAVFAGSIPNERFTDEQRNQLLITTVGKLI
                     FNTILPKSFPYINEPTKFNLEIETPAKYFVDTTTDVRAHIAAQELIDPFKKKILGNII
                     AEVFKKFHITETSKMLDRMKDLGFKISTKAGMTVGIADILTLEEKHEILEKAHDTVEK
                     ITKSFRRGLITDDERYERVIGVWNAAKDEIQGKLILSLDRLNPIFMMQDSGARGNISN
                     FTQLAGMRGLMADPSGRIVELPITSNFREGLTVLEYFISTHGARKGLTDTALKTADSG
                     YLTRRLVDVAQDVIIREDDCGTDRGLTIKAIREGTEIIEPLEERLEGRYSRKTIRHPE
                     TKEVIARENDLITEAIATQIVDAGIEEVTIRSAFTCNTKHGVCKKCYGKNLATGTEVE
                     VGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIFEARNPKGQAIIT
                     EVGGEVVSIEEGRDRQQEITIQGTDDRRSYNIPYTARLRVEEGTIVERGEALTEGSVD
                     PKALIRVRDVLSVQEYLLAEVQKVYRMQGVEIGDKHVEVMVRQMLRKIRVMDTGDTNI
                     LPGTLMDIHTFTEANRDAILSGSQPATGRPVLLGITKASLETDSFLSAASFQETTRVL
                     TDAAIKGKRDELLGLKENVILGKLVPAGTGIGRYRKLKSEVIKETAEVTDEITNI"
     gene            7911..8456
                     /locus_tag="U0308_000727"
     CDS             7911..8456
                     /locus_tag="U0308_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM2315716.1"
                     /translation="MITHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRENAEETLEK
                     VKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIF
                     DFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFV
                     IPVWDLADVPEALLLLKKISA"
     gene            8522..9982
                     /locus_tag="U0308_000728"
     CDS             8522..9982
                     /locus_tag="U0308_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2315717.1"
                     /translation="MTEVKKQFPKGFLWGGATAANQVEGAYDVDGKGLSTADMVKFIP
                     KEERTQDHALDVSKAEIEAIIAGKVEGRFPKRDGVDFYHHYKEDIALFAEMGFKTFRL
                     SLNWARIFPNGDDKEPNEKGLEFYDKVFDELLKYDIEPLVTLSHYETPLNLTLKYNGW
                     ADRRVIGFFTNYAETVFKRYKNKVKYWLTFNEINVISLSAYTGGGVLLEDAKNPLELS
                     YQAGHHQFVASALATKLAHEIIPGSQVGCMLARMATYPATNNPDDILKAQYENQQNLF
                     FTDVHARGEYPSYMNRFFQENDIHIVKEVGDDEILKAHTVDFISFSYYMSLSATASPE
                     GDRSAGNLMGGVKNEYLESSDWGWQIDPKGLRWTLNDLYSRYELPLFIVENGLGAYDT
                     VEEDGKIHDDYRIDYLRKHIEQMKEAIADGVDLIGYTSWGPIDLVSASTSEMSKRYGF
                     IYVDQDDWGKGTLERSRKDSFFWYKKVIETNGEDLD"
     gene            10256..11728
                     /locus_tag="U0308_000729"
     CDS             10256..11728
                     /locus_tag="U0308_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="InlB B-repeat-containing protein"
                     /protein_id="HEM2315718.1"
                     /translation="MKQRKTSLLHVLLVVTAILGISLWVNASHGMEAQAESIAQPAPI
                     NEIFTDPALAEAVKTELGKADVSDVVSQADLDQITKIDAEGKGISSLEGIQYLTNLNS
                     LSVTSNQISDISPLTNLTKLDSLYLGENQISDLTPLSRLTTLTFVQLSINQIKDVTPL
                     ANLTNLTYLDLRENQISDASPLVNMTNLTVLHLEKQQITADPVVYQTNLVAPDILKNA
                     YGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPI
                     VEAPVNYITTFDVDGTTTTENVAVDSLITEPAAPTKEGYTFSGWYDAETGGNEWDFAV
                     DKMPATNMTLYAQFTINSYTAAFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVGWYD
                     AKTGGNEWNFATDKMPAGDVTLYARFTKNASSDNSQIAPGNDDKNDKDNLTIKANDSA
                     NATSTKLPKTSDDSSMVPTVLGTLFIGGALLILRKKTTNI"
     gene            11862..13508
                     /gene="inlH"
                     /locus_tag="U0308_000730"
     CDS             11862..13508
                     /gene="inlH"
                     /locus_tag="U0308_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="InlH/InlC2 family class 1 internalin"
                     /protein_id="HEM2315719.1"
                     /translation="MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPI
                     NVIFPDPALANAVKTATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIG
                     LELKDNQITDLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPL
                     AGLSNLQVLYLDLNQITDISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDN
                     KISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLV
                     VPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFS
                     GTVTQPLTEAYTAVFDVDGKQTSMTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNKW
                     DFSTDKMPAENITLYAQFTINSYTASFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFK
                     GWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNDSPNPNDPTPNTPTGNGDGTSNPSN
                     SGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRKSIKVK"
     gene            13704..15410
                     /locus_tag="U0308_000731"
     CDS             13704..15410
                     /locus_tag="U0308_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014600431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="InlB B-repeat-containing protein"
                     /protein_id="HEM2315720.1"
                     /translation="MKRNKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIAQPTPIN
                     EIFTDENLANAIKATLNKPSTTSDVSQTELDSIRDVTAESSNIASLEGAQYLNNIDTL
                     ILNNNKITDLNSLAGLSKLRILEANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVS
                     NLINLETIELSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQ
                     ISDLSPISSLGAMEIMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSP
                     NFFGITLDDQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDNGVYASPNISWNLA
                     NYTNQVSYTFNKQLAQGSFSGTVIQPLHNAYTATFDVDGVKTNEVVEETKLLQEPTAP
                     TKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKV
                     TYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNATPDS
                     NDPTTVTPTGNGNGTSNPSNSGGNTTLPTAGDENTMLPIFVGVFLLGTAMLILRKTIK
                     VK"
     gene            15618..17117
                     /locus_tag="U0308_000732"
     CDS             15618..17117
                     /locus_tag="U0308_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HEM2315721.1"
                     /translation="MKRNKVILRIVVTLAAVLAITFWVGMSSKEVEAAVIEQPTPINE
                     IFTDPVVADNVKTLLEKADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELE
                     LTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLTTMHLIYTDITDVTPLEG
                     LTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKV
                     SDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVP
                     NVIKGLSGELIAPDTISDNGAYTSPDLTWDLNSYINSVSYTFNQSIAFKNTTVPFSGT
                     VTQPLTEAYTAVFDVDGEQTSLTVVVNELIEEPTVPTKEGYTFDGWYDAETNGNKWDF
                     AVDKMPASDITLYAKFTENEEPNASSSINVEPNDDNSINVEPDASNSITVKPTENNDG
                     TNNPNSSGDDKINIKLPITGDEWNVLPIFVGAVLIGMGLVLFRKKRQTK"
     gene            17251..18390
                     /locus_tag="U0308_000733"
     CDS             17251..18390
                     /locus_tag="U0308_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArgE/DapE family deacylase"
                     /protein_id="HEM2315722.1"
                     /translation="MERQRKIQILKDIVNIDSTNGHEEQVANYLQKLLAEHGIESEKV
                     QYDVDRASLVSEIGSSDEKVLAFSGHMDVVDAGDVSKWKFPPFEAAEHEGKIYGRGAT
                     DMKSGLAAMIIAMIELHEEKQKLNGKIRLLATVGEEVGELGAEQLTQKGYADDLDGLI
                     IGEPSGHRIVYAHKGSINYTVKSTGKNAHSSMPEFGVNAIDNLLLFYNEVEKFVKSID
                     ATNEILGDFIHNVTVIDGGNQVNSIPEKAQLKGNIRSIPEMDNETVKQVLVKIINKLN
                     KQENMNLELIFDYDKQPVFSDKNSDLVHIAKSVASDIVKEEIPLLGISGTTDAAEFTK
                     AKKEFPVIIFGPGNETPHQVNENVSIENYLEMVDVYKRIATEFLS"
     gene            18537..18953
                     /locus_tag="U0308_000734"
     CDS             18537..18953
                     /locus_tag="U0308_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2315723.1"
                     /translation="MVKKEERLGVLLWFRFSRFYNRNMKLTNQNLRAVGISTAQFDCI
                     AQIGLDKEITQQQLAEKLVVTKGNVTQLLAKLEQLGYITRTKTGREKHITLTEKGQAC
                     YRENVPKQEAFQQAQFDKLTRDEQKELLKLLKKLGE"
     gene            18960..19919
                     /locus_tag="U0308_000735"
     CDS             18960..19919
                     /locus_tag="U0308_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HEM2315724.1"
                     /translation="MKLTGIHHVSIFTANARANFDFYTKIMGLRLVKKSVNQDDPYTY
                     HLYYGDEIGSPGTALTFFEVPNMAKNHPSRNAISSLSLRVPSDEALHYWDKRLDEHRI
                     FHSKPIDQFGRKIIRLKDTDGLPVNLISDETSTQVTEVSPWEDSPVPAEYAIRGLGPV
                     RFSVFKKEKTDRLLTKILGFERIGAYEDDDKLVTVFKTGDVGLGGEVHVESRPDLEQG
                     NLGAGGIHHVAFRVPTDGDLIGWTEMIQDLGYKNSGYVDRFYFHSLYFRESNGILIEL
                     ATDEPGFQTDFTKEHGTYVDLPPHLENRREDILAHLKPLDTDK"
     gene            19991..20626
                     /locus_tag="U0308_000736"
     CDS             19991..20626
                     /locus_tag="U0308_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM2315725.1"
                     /translation="MAEGLRTIYFVRHGKTEWNMTGQMQGWGDSPLVAEGIDGAKAVG
                     EVLKDTPIDAVYTSTSKRTQDTAAYILGDREIEIQPLEELKEMGFGTWEGIRVTEIDE
                     QHPEERAKILHSPETYKAEVNGGETYYELAERLLEGVEKIIAENLSGNILVVSHGMSL
                     TLLLYLLQGGTVEDHRKEAPRILNTSISIVEYQNGEFSLKKINEIGHLDLK"
     gene            20710..22596
                     /locus_tag="U0308_000737"
     CDS             20710..22596
                     /locus_tag="U0308_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEM2315726.1"
                     /translation="MKRIVKIFLHYLLGILGIILISCVPAIFSKVTSWSSSTYWEALK
                     SIFTAIFHPTKWEISYQGSAEVFHVSLADFITGPYFYSMKIIVASLLISAIIAYLLVI
                     ATFRGPKWLRRGLSGFLSILQAFPDFSFIFLIQMAVVYIYQQTGVFTLNFYSLNGEQI
                     YAAPIVCLSIIPTVLFYKMMMLLMENEWQADYIQLARGKGLTDRAILLRHATPNMMQS
                     LFYQSKTIVWFILSAYLVVEFLFGIEGVLYYLLAGFSPLNIFLVLALVFTPFYFFYAL
                     IDLWISRGKNTESANVTRIPLHWNSFQKAFTEKVNLKSKWRNFVVTTGQLLKRPSFSI
                     PLATLSILLIASLIYGLMGDKINSLKFISDATGRVTDMAPFKPNAQVWLGTDQAGNSI
                     LDQLLVGIKYTLLIAVIIATLRVVIGYILAVPLAFFSKPRTRNFVQSIADGMHYLPLS
                     LLVFIIMVNEFISYSGVFETSLFTRITFQILIMVVIVLPITTNRISSEISQVLKKEFV
                     LSALVFGGNARWILTKHINPQIWSKLILIWIEQLIQTLQMFVHLAIFGIFIGGAIMGA
                     DDGMLNPVIPELSGLIANAKFVFANHQFWIILPPLVVFMVLILCFQIMANSLLKREEE
                     SKKA"
     gene            complement(22625..23710)
                     /locus_tag="U0308_000738"
     CDS             complement(22625..23710)
                     /locus_tag="U0308_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HEM2315727.1"
                     /translation="MKKFILASLACTTLISFSPLVGQVEVSAATTNIATAPEKNLQEA
                     PPATVDQIFPDDALAFKVAQELGVSEDTVVTQEQLDTIETMVYVDFGVEDLTGMEYLH
                     NLKFVDLSQNKISNLENLANLTELETVSLNYNQITDITPLMNSPKLYNLELGVNQIST
                     LPSFENLTNLRILNLSSNQLKDISALKDTPQLTNLSISANNISDISVLSECDNLRVFY
                     AESNQLTSIEPLRNKTKLEYFDANFNQIKDVTPLSTIPTIRSIKIEENQISDFSSLAG
                     HRLELFDATGQNIYLPDVALGDSTNIVMKDNLGVTLHDWVWYTPGTYQNDTLTWENAG
                     DNSAYFLNNQYPTYPSVTVTVYQTVTP"
     gene            complement(23844..24467)
                     /locus_tag="U0308_000739"
     CDS             complement(23844..24467)
                     /locus_tag="U0308_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEM2315728.1"
                     /translation="MADLQDWLARIQAKITALKEKDPDLNLFGSESHAYKLNQPLSNQ
                     TLTEFENEHQITLPQDYRAFLEQIGNGGMGPYYGLETLADGLCASLDYKDEKYGVQTL
                     SEPFPHTDDWTAPGYKEGMSDEDYDAWQELCFQDKEVFGLLRIANFGCGVSINLVVNG
                     PSYGEIWVDDRNNDNGVYPDFYFGNEERLGFLEWYELWLDKSIEEIE"
     gene            complement(24471..25907)
                     /locus_tag="U0308_000740"
     CDS             complement(24471..25907)
                     /locus_tag="U0308_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2315729.1"
                     /translation="MEHQKRSPFPKDFLWGSASAAYQIEGAWDADGKGKSVWDEYVRI
                     PGTTFKGTNGDVAVDHYHRYKEDVKLMADAGLKAYRFSIAWTRIFPNGKGEVNEAGLK
                     FYDNLIDELLKYDIEPLVTLYHWDIPQALFDEYGGWESRQVIEDFTNYSTTLFKRYGD
                     RVKYWVSLNEQNIFVGMGYGQALHPPKVSDPKRMYAVNHIANLANASVIKAFHEIVPD
                     GKIGPSFAYTPHYPIDTDPKNVQAADDAEELNSYFWMDMYAFGRYPKAVWKYLEENDI
                     APVIEDGDMELLASAKPDFMGVNYYQSATVAYNPLDGVGQNNEMNFTGKKGSTKETGV
                     PGVYKKVVNPFVKTTNWDWTIDPKGLQIALRRINSRYALPILITENGLGEFDKLVDGE
                     VNDDYRIDYLSAHATAIRDAISDGVDMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDV
                     EDDAPMTRIPKKSYYWYKQVIETNGADL"
     gene            complement(26027..26839)
                     /gene="yidA"
                     /locus_tag="U0308_000741"
     CDS             complement(26027..26839)
                     /gene="yidA"
                     /locus_tag="U0308_000741"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase"
                     /protein_id="HEM2315730.1"
                     /translation="MYKLIAIDIDGTLLTDDHKVTDEVKEAIRQAKLKGVKVVLCTGR
                     PLVGVENYLTDLELREEGDYVISFNGAFVQDTFTKEVISHLTLGIDDLKEIYQVSLDS
                     NLHMHFFDDKALYTPNREIGKYTIVEAYLTGSQLIYKEIENVPEDFIMSKAMFIEEAP
                     ELEVGIAKIPESFREKYHLVRSTPFYLEILNRDASKGNAVKELSEKLGIKQSEVICIG
                     DQENDVTMLEFAGLGIAMGNAPERIKQLADYTTASNNDSGVAKAIQKFVLDK"
     gene            26975..27478
                     /locus_tag="U0308_000742"
     CDS             26975..27478
                     /locus_tag="U0308_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2315731.1"
                     /translation="MKRNYHVKFLNEKDVELAEAVCAASEDYYLMEQDKPASKSDALK
                     IITEIPNGKTRFDKFVLAVLDENEKPIGLVDIVSDYPRKGRWFIGLLLLTPDARHNGL
                     GKVLHQTIKEWANDGGADSLALGVLAENEKGRGFFEYLGYTKEETKQANYGGKEQEVS
                     IFTLAIK"
     gene            complement(27515..28177)
                     /locus_tag="U0308_000743"
     CDS             complement(27515..28177)
                     /locus_tag="U0308_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2315732.1"
                     /translation="MAYPFNHKEFVAMMEQYNLKSNSITIPEHTILNDLVTENRDCVY
                     LLKSGILAGYIDFDNDKIYSIFTSNFFMGYYTIFDNASLVLTYQTLTECELIIYKKKD
                     IEYSLSLFPENFSFQYTIMRTIAKHGYYKSLLQYRDKKDQLAFVFEMLVKILDIPVED
                     GVAVLPKSISTTVIKNYCTLSKAFFYSQLKELKEAGIISKVKLQWRINMEALSEKNNS
                     IN"
     gene            complement(28435..29277)
                     /locus_tag="U0308_000744"
     CDS             complement(28435..29277)
                     /locus_tag="U0308_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2315733.1"
                     /translation="MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQGD
                     AIYIKAPSGEDILIDAGNKGKGKTVVNYLKKLKVKDIEIMIASHSDADNIGGLPEVMN
                     NIKVKSLYAPKSTNTTAAYKNFVNTAKKKKLTIKTAKAGVKLPVKGVNAQFVGPVKTY
                     GKTDRNNWSAVLHVAYKKNTFLFTGDAQTKAENDMIKAKKTLRADVLKVSTQGSKAAT
                     SKAFVNVVKPKYAIISVGKNGYGHPTSQTVNTLTKAKAKVYRTDRNKTVVVTGNGSSY
                     SIGK"
     gene            complement(29294..30115)
                     /locus_tag="U0308_000745"
     CDS             complement(29294..30115)
                     /locus_tag="U0308_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2315734.1"
                     /translation="MTKKYLICSDIDGTLLRQDQTVSIKTRDLIQTLEKDGHIFSIST
                     GRMYRSAREVGFQVSNSGHVIASNGSYAAIRDEQLLKTTLEEKAIRSTYDIMSDFDLP
                     LFFFSTNTLFYTKEPPAFFQNLADKSRLDTGHNSFSLVSINEKGVFDENMHQFLNAIV
                     VAEDDASKLTEVRAALNEANGIRVLSSHHNNLEILPANSDKKTAVEALGKHYNIPRER
                     IITFGDGENDIGMLQYAGTGVAMANASDNVKAAADHLTDTNEADGVYKFLKEFIS"
     gene            30231..31202
                     /locus_tag="U0308_000746"
     CDS             30231..31202
                     /locus_tag="U0308_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2315735.1"
                     /translation="MGNLNWAILGPGSIAHEFAEGMRGMNREIYAVGARSLEKGQAFA
                     SQYGIENVYDDFDKMLADPAIDVVYIATPHSNHYEFIMKSLHNGKHVLAEKAITVSSE
                     ELNEINVLAKEKGLIVKEAMTIFHMPLYKKLREIVESGAIGKLKIIQVAFGSAKEKDP
                     KNRFYNMDLAGGALLDIGTYALSFARYFLSETPDEVLTTMKKFETGVDEQSGILLKNK
                     EEELAVVSLSFRAKMPKRGVIACEEGFITVDEYPRASRATVTHTATGKVEEIEVGETS
                     KALEYEIIAMEESIATGENTTYQLTNDVITIMSDVRTQWGIKFPFEK"
     gene            complement(31240..32340)
                     /gene="ugpC"
                     /locus_tag="U0308_000747"
     CDS             complement(31240..32340)
                     /gene="ugpC"
                     /locus_tag="U0308_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEM2315736.1"
                     /translation="MAQLSLEHIYKIYDNKVTAVSDFNLEIDDKEFIVFVGPSGCGKS
                     TTLRMIAGLEEISKGELSIDGKVMNNVAPKDRDIAMVFQNYALYPHMTVYDNMAFGLK
                     LRKMPKDEIKKRVEHAANILGLTEYLKRKPSALSGGQRQRVALGRAIVRDAKVFLMDE
                     PLSNLDAKLRVQMRAEITKLHQQLDTTMIYVTHDQTEAMTMATRIVIMKDGVIQQVGS
                     PKQVYDHPVNMFVAGFIGSPAMNFFKGRLEGSNFIGDDFTIEVPEGKLKLLKDRGFDG
                     KDIVFGIRPEDIHDEPIVIEANPGYTFKATTIVAELTGAEFMLHSRVGTHEFVARVDA
                     RSEHQPNEVLTLAFEMSKSHFFDPETEDNLTD"
     gene            32631..34781
                     /gene="nrdD"
                     /locus_tag="U0308_000748"
     CDS             32631..34781
                     /gene="nrdD"
                     /locus_tag="U0308_000748"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HEM2315737.1"
                     /translation="MYVEQLNEQMVIKRDGRKANFDLIKIRNAVEASMKAINLEDETF
                     LEEILLEVVSELPNKADMTIDEIQHCVENTLMKSTYPDVARAYIEYRHDRDHERENIT
                     DMHKSVEKLLQKDKTVVNENANKDATVFNTQRDLTAGAVAKSYALKYMLPKHVSNAHL
                     KGEIHFHDLDYSPYHAMTNCCLIDIEGMLSKGFTIGNANVESPKSIQTATAQIAQIIA
                     NVASSQYGGCSVDRIDEVLSVYARLNFEKHKKDAMEWVVPEKQEGYAAEKTRKDIYDA
                     MQSLEYEINTLYTSNGQTPFVTLGFGLGEDWFAREIQKAILKVRIGGVGKDKHTAIFP
                     KLVFSIRRGTNLNAEDPNYDIKQLALECSSKRMYPDVLNYDSLVRLTGDFKVPMGCRS
                     FLPAWENENGEHVNAGRNNLGVVTLNIPRIAIQSGGDKERFWEIFHERMKTVKDALLF
                     RLNRVRQARPENAPILYKYGAFGKRLQDGENVDQLFNKERSTISIGYIGLYEAATVFY
                     GGEWEGDKEAKNFTLDILKELKGYADNWKDEYGYWFSVYSTPSESLTDRFNRLDKEKY
                     GVIKDITDKDYYQNSFHYDVRKKITPFEKIDFEKDYPEFCSGGFIHYCEYPKMVHNTK
                     ALEAVWDYSYDRVAYLGTNTPIDKCYECNFEGEFVPTEEGFKCPSCGNTDPEKADVVK
                     RTCGYLGNPMKRPMVHGRHVEISNRVKHMENLGE"
     gene            34774..35325
                     /gene="nrdG"
                     /locus_tag="U0308_000749"
     CDS             34774..35325
                     /gene="nrdG"
                     /locus_tag="U0308_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HEM2315738.1"
                     /translation="MNNPKPCEWKSNELSRGYIADYKAFNFVDGEGVRCSLYVSGCPF
                     HCEGCYNKAAQSFKYGKPYTKELEDDILKDIGHESVQGLTLLGGEPFLNTATCLSVVK
                     RIRATYGETKDIWSWTGYTWDEMMQETADKLELLSLIDVLVDGRFEQKLFDPNLAFRG
                     SSNQRIIDVQKSLAAGEVVLYEL"
     gene            complement(35469..>36057)
                     /locus_tag="U0308_000750"
     CDS             complement(35469..>36057)
                     /locus_tag="U0308_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2315739.1"
                     /translation="HTDLVNTASQRNNHVYLIVEGFVSISMNPQSSSIYTVLGKGSFV
                     NYYSLFQGNVDDFLFTTISPCTIYKYSFKDLEYFLSMFPENFGFQFFIMRDLARHAFF
                     KSLFAETSSSDKLELSFSNMGKLHGTLYEKDSVILPKEMRTSTIAAYSNLSKSSFYKQ
                     LTLLKDQGKIWKNGREWVVRNKELYDYVKARQFVD"
BASE COUNT        11744 a         6789 c         7163 g        10361 t
ORIGIN      
        1 ttgacattgg ctaatggtta ttgtattatt atataatgcc aaaagaatcg aaactgtttt
       61 tttgtgttta ttattaagcg aaaatgctgt cgaaaatcaa gcatttgcaa tcgattttgg
      121 caaaatagaa gacatagatg tggctttcaa aaatacaaaa cggtataaac tttttccgtc
      181 ttgtactgac acttttaagg aaaattattt tctagggagt ttcagcaata tgaaatccgc
      241 tttctttttg tctaaataga atattttttg tgcgaaagtt ccacttatgt taactctgga
      301 aatgcttctt ggatgcgtgt ttgcaagcca agattagaaa caaaaaggaa aattttgatg
      361 cacggtgttt aagccagtat attttgcacg tagcaaaaaa ctgctagcgt cttaaacctc
      421 ggatacggaa ggttccattg ttttcgcaac cataattaac aagtgtgctt ataaattttt
      481 taattaattt gaggggtgaa tagtttgtca ggacattcag gacatgatgt aaaatatgga
      541 cggcatcgta cgcgtagaag ttttgcgcga atcagtgaag tacttgaatt accaaactta
      601 attgagattc aaacagcttc ttaccaatgg ttcttagatg aagggctacg tgagatgttc
      661 cgcgatattt cgccaattga ggattttgcg ggtaatttat ctttagaatt cattgattac
      721 gatcttggag aaccgaaata ctcggtagaa gaatctaaga accgtgatgc aaactatgcg
      781 gctccactac gcgtgaagtt gcgcctaatc aacaaagaaa ccggcgaagt gaaagaccaa
      841 gaagtattta tgggtgattt cccactaatg actgaaatgg gtacgttcat tattaatggg
      901 gcagaacgtg ttatcgtttc ccaattagtt cgttctccag gtgtttactt caatggaaaa
      961 ctagacaaaa atggtaaaaa aggctttggt tctactgtca tccctaaccg tggggcttgg
     1021 cttgagtatg aaacagatgc taaagacgtt gtacacgttc gtattgaccg tacacgtaaa
     1081 ttaccagtaa ctgttttact tcgtgcacta ggctttggtt ccgatcaaga aattattgat
     1141 ttaatcgggg acaatgacta cttgcgcaac acactggaaa aagacaacac tgacaatgct
     1201 gaaaaagcac ttctagaaat ttacgaaaga ttacgtccgg gtgaaccccc aacagttgat
     1261 aacgctagaa gcttactagt ttctcgtttc tttgatccaa aacgctacga tcttgcaagc
     1321 gttggacgtt ataaaatcaa caaaaaatta catctaaaaa accgtctatt caaccaaaca
     1381 ttagcagaaa ctttagtgga tccagaaact ggtgagatta tcgcttctaa aggtgacatt
     1441 ttggatcgtc gtaatttaga tcaaattatt cctaatttag aaaacggtgt aggtttccgc
     1501 acacttcgtc caactgatgg agttatggaa gatagcgtac tcgttcaatc tattaaaatc
     1561 tacgcaccaa atgatgacga aaaagaaatc aacatcattg gtaacgcgta tattgaagaa
     1621 aatgtaaaac acatcacgcc ttctgatatt atttcatcca ttagctactt ctttaacttg
     1681 ctacatggtg ttggcgatac agatgacatc gatcacctag gtaatcgtcg tcttcgttct
     1741 gttggtgaac ttttacaaaa ccaattccgt atcggtttat cccgtatgga acgtgtagtt
     1801 cgtgagcgta tgtctattca agatatgact acaattacac cacaacaatt gattaatatt
     1861 cgcccagtag ttgcttctat taaagaattc tttggtagct cgcagttatc tcagttcatg
     1921 gatcaaacaa atccacttgg cgaacttacg cataaacgtc gtctttcagc gcttggacct
     1981 ggtggtttga cgcgtgaacg tgctggttat gaagtacgtg acgtgcatta ctctcactat
     2041 ggtcgtatgt gtccgattga aacgccagag ggaccaaaca ttggtttgat caactccctt
     2101 tcttcctttg cgaaggtaaa taaattcggc tttatcgaaa cgccttaccg ccgcgtagat
     2161 cctgaaacaa accgtgttac tgataagatt gattatctaa ctgcggatga agaggataat
     2221 tacgtagtag cgcaagcgaa ctcgaaatta gacgaacaag gtactttcac agaagaagaa
     2281 gttatggctc gtttccgttc agaaaactta gcggtagaaa aagaacgtat tgactacatg
     2341 gatgtatcgc ctaaacaggt tgtatctgtt gcgacagcat gtattccgtt ccttgaaaac
     2401 gatgatagta accgtgcgct aatgggagcg aacatgcaac gtcaagcagt tcctcttatg
     2461 caccctgaag ctccatttgt tggaacaggt atggaacacg tatctgcaaa agactctggt
     2521 gctgctgtaa ctgccaaaca tgacggtatt gtagaacacg ttgaagctcg cgaaatctgg
     2581 gttcgtcgtg tatctctagt ggatggcaaa gaagtaactg gcggaattga taaatataca
     2641 ttacgtaaat ttgttcgttc taaccaaggt acttgttata accaacgtcc aaacgtagca
     2701 gaaggtgacc gcgttgttaa aggagaaatc cttggtaacg gtccatcaat ggattccggt
     2761 gaacttgctc ttggtcgtaa cgtactagtt gcgttcatga cttgggatgg ttataactac
     2821 gaggatgcga tcatcatgag tgaacgtctt gtaaaagatg acgtttatac ttcgattcat
     2881 attgaagaat tcgaatcaga agctcgtgat acaaaactcg gacctgaaga aatgactcgt
     2941 gatattccaa acgttgggga agatgcttta cgcgaccttg acgaacgtgg aattatccgt
     3001 gttggtgctg aagtaaaaga caacgacctt ctagttggta aagtaacacc aaaaggagtt
     3061 accgaattaa ctgcagaaga acgtttatta cacgctatct ttggtgaaaa agcacgtgaa
     3121 gttcgcgata cttcattacg tgtacctcat ggcggcggcg gaatcgtgct tgacgtgaag
     3181 atctttacac gtgaagctgg cgacgaacta ccacctggtg taaaccaatt agtacgtgtt
     3241 tatattgtac aaaaacgtaa aatccacgaa ggcgataaaa tggccggacg tcacggtaac
     3301 aaaggggtta tctcccgtat tttacctgaa gaagatatgc catttatgcc agacggaaca
     3361 cctgttgata tcatgcttaa cccactaggg gtaccatctc gtatgaatat cggacaagta
     3421 cttgagctac acttaggtat ggctgctcgt gctttaggaa ttcacgttgc aacaccagta
     3481 tttgatggtg cgaatgaaga agacgtttgg agcacagtgg aagaagctgg tatggcccgc
     3541 gatgcgaaaa caattcttta tgacggacgt tctggtgaag catttgataa ccgtatctct
     3601 gtaggtgtaa tgtacatgat caaacttgcc cacatggttg atgataaact tcatgcgcgt
     3661 tcaactggac cttactctct agtaacgcaa caaccgcttg gtggtaaagc acaatttggt
     3721 ggacaacgtt ttggtgagat ggaagtatgg gcactggaag cttatggtgc tgcttataca
     3781 cttcaagaaa tcctaacgat taaatccgat gacgtggttg gtcgtgtgaa aacttacgaa
     3841 gcgattgtta aaggcgaaag cgttccagaa cctggtgtgc cagaatcctt caaagtactc
     3901 atcaaagagc ttcaaagtct tggaatggat gttaaaatgc tttccgcaga cgaagaagaa
     3961 atcgagatgc gtgacatgga tgatgacgac tttactaatc aaaatgatgc cttcaatatc
     4021 gtacaaccgg aaaatacagc cgctgaaaag actgagtaat tcggttcgat aattgagact
     4081 ccaaaacaat aagaaacaat gatttgtttt ttgcaaaata taaaattaag cgatcgctaa
     4141 gactttacct gaaaagtctg ggaagtgtgc gggaatcccc aagcgcttcc taaagcgaat
     4201 gctccaaact aatttaggag gttgggcact tgttagatgt taataatttt gagtatatga
     4261 aaatcggtct ggcatctcca gataaaattc gttcatggtc tcatggtgaa gtaaaaaaac
     4321 ctgaaaccat caactacaga acgcttaaac ctgaacgtga cggcttattc tgtgaaagaa
     4381 tttttggacc aatgaaagac tgggaatgtt cttgtggtaa atacaaacgt gttcgctata
     4441 aaggcgtagt ttgtgaccgt tgtggagtag aagtaacgaa atcaaaagtc cgtcgtgaac
     4501 gtatgggcca tattgaactc gcagctcctg tttctcacat ctggtacttc aaaggaattc
     4561 caagccgtat gggtcttgtt atggatatgt ccccacgtgc attagaagaa attatctatt
     4621 ttgcatctta cgtggttaca gaaccaggcg atactccact tgaaaagaaa caacttttat
     4681 ctgaacgtga ataccgcgtt taccgcgaaa aatatggtaa aggtttctca gctggtatgg
     4741 gcgcagaagc tatcaaaaaa atcttagccg atatcgactt agaaaaagaa acaaatgatt
     4801 taaaagaaga actaaaatct gcacaaggtc aacgtcgtac tcgtgcgatt cgtcgtttgg
     4861 aagttatgga agctttccgt aattccggca acaacccaag ctggatggta cttgacgtgc
     4921 taccagttat cccaccagaa attcgtccaa tggtacaact tgaaggtggc cgttttgcaa
     4981 caagtgattt gaatgactta tatcgtcggg taatcaaccg gaacaaccgt ttgaaacgcc
     5041 ttcttgatct aggtgcacca aacattatcg tgcaaaatga aaaacggatg ctacaagaag
     5101 ctgtcgatgc tctaattgac aacggtcgtc gtggtcgtcc agtaacaggt ccaggtaacc
     5161 gtccgcttaa atccctttct catatgctta aagggaaaca aggtcgtttc cgtcaaaact
     5221 tactaggtaa acgtgtcgat tattctggtc gttccgttat cgtagttgga cctaacttaa
     5281 aaatgtacca atgtggtctt ccaaaagaaa tggcacttga attattcaaa ccatttgtta
     5341 tgaaagaact agttggacgc ggtttagcac acaacattaa gagcgctaaa cgtaaaatcg
     5401 aacgtatggc tccagaaatc tgggacgtat tagaagaagt tatccgtgaa catccggtat
     5461 tacttaaccg ggcgcctacg cttcacagac ttggtattca agcatttgaa ccaacgctag
     5521 ttgaaggtcg cgcaatccgt cttcaccctc ttgtatgtac agcttacaac gctgactttg
     5581 atggtgacca aatggcggtt cacgttcctt tatccgcaga agcacaagca gaagcacgta
     5641 ttttaatgct tgcagcgcaa aacattttga accctaaaga tggtaaacca gttgtaacac
     5701 cttcccaaga tatggtgcta ggtaactact accttacttt agaacgtgaa aatgctgtcg
     5761 gtgaaggtac tatcttcaaa gatatcaatg aagcgcaact tgcgtatcaa aacggctatg
     5821 tacacttaca ttctcgtatt gctgtatttg ctggctcgat tccaaacgaa cgtttcactg
     5881 atgaacaacg caaccaatta ttaattacga ctgttggtaa actgattttc aacacaatct
     5941 taccaaaatc gttcccttat attaatgaac caacgaaatt caacttagaa atcgaaacac
     6001 cagctaaata tttcgttgat actacaacag atgtgcgtgc tcacattgcg gcacaagaac
     6061 taatcgatcc attcaaaaag aaaatcctcg gtaacattat cgcggaagtc ttcaagaaat
     6121 tccatattac cgaaacttca aaaatgcttg accgtatgaa agatcttggt ttcaaaatct
     6181 cgactaaggc cggtatgaca gtaggtattg cggatatctt aacacttgaa gaaaaacatg
     6241 aaattcttga aaaagcacat gatacagttg aaaaaatcac taaatcattc cgtcgtggtc
     6301 tgattacaga tgatgaaaga tacgaacgcg ttatcggtgt atggaatgct gccaaagatg
     6361 aaatccaagg aaaactgatc ttgagtttgg accgcttaaa cccaatcttc atgatgcaag
     6421 attccggagc tcgtggtaac atttccaact ttacacagct agctggtatg cgtggactga
     6481 tggctgaccc atccggacgt atcgtagaat tgccgattac atctaacttc cgtgaaggtt
     6541 taacggtctt agagtacttc atttctaccc atggtgcgcg taaaggtctt accgatacag
     6601 cccttaaaac agccgattcc ggttacctta ctcgtcgtct tgttgacgtg gctcaagatg
     6661 ttatcattcg tgaagacgat tgtggcactg accgcggtct tacaattaag gctattcgtg
     6721 aaggtactga aatcatcgaa ccacttgaag aacgtctgga aggtcgttat tctcgtaaaa
     6781 caattcgtca cccagaaaca aaagaagtta ttgcacgtga aaatgactta attacagaag
     6841 caattgccac tcaaatcgtt gatgctggta ttgaagaagt aactatccgt tctgcattca
     6901 catgtaatac aaaacacggc gtatgtaaaa aatgttatgg taaaaacttg gcaactggta
     6961 cagaagtcga agttggagaa gcagttggta tcatcgctgc ccaatctatc ggggaaccag
     7021 gaactcagct tactatgcgt actttccata caggtggggt tgccggagac gatatcacgc
     7081 aaggtcttcc acgtattcaa gaaatctttg aagcacgtaa tccgaaaggg caagctatca
     7141 tcactgaagt tggcggtgaa gttgtttcta tcgaagaagg tcgtgatcgt caacaagaaa
     7201 tcactatcca aggtacagat gaccgccgtt cttacaacat tccttacact gctcgcctgc
     7261 gtgtagaaga aggaactatc gtagaacgtg gggaagctct aactgaaggt tctgtggatc
     7321 ctaaagcctt gattcgtgtt cgtgacgtat tatccgttca agaatatcta cttgcagaag
     7381 tacaaaaagt ttaccgtatg caaggggtag aaattggcga taaacacgtt gaagtaatgg
     7441 ttcgtcaaat gttacgtaaa atccgcgtaa tggatactgg tgatacaaac atcttaccag
     7501 gtacattaat ggatattcat acgtttacag aagccaaccg cgatgctatc ttaagtggta
     7561 gccaaccagc aacaggtcgt ccagttcttc tagggatcac aaaagcttcc cttgaaactg
     7621 actccttctt gtctgctgca tcattccaag aaacaactcg tgtcttgaca gatgctgcaa
     7681 tcaaaggaaa acgtgacgaa cttctaggac ttaaagaaaa tgttatccta ggtaaacttg
     7741 ttccagctgg tacaggtatt ggtcgttacc gcaaactgaa atccgaagtt atcaaggaaa
     7801 cagctgaagt aactgacgaa atcacaaata tttaatttta caaagccaag tgtgccgttc
     7861 gcgcgcactt ggcttttttt gttatactct agaaaaagga gtgaagtgat ttgattacac
     7921 atgttatttg ggatatgggc gaaacattaa acaccgtacc aaacacaaga tacgaccatc
     7981 accctctcga tacttatcca gaagtagtgc tacgggaaaa tgccgaagaa acgcttgaaa
     8041 aagtgaaaca acttggattc aaacaagcaa tcctcagcaa cactgcaaca agtgacacag
     8101 aagtaattaa gcgcgtatta actaattttg gtatcatcga ttattttgac ttcatttacg
     8161 catccaattc cgagttacaa ccagggaaaa tggaaaaacc agacaaaact atttttgatt
     8221 tcacactaaa tgcccttcaa attgataaaa cggaagcggt catggtcggg aatacattcg
     8281 aaagtgatat tattggcgca aatcgtgcgg gaatccatgc catatggctc caaaatccag
     8341 aagtctgcct gcaagatgag cgcctgcctc ttgtcgcgcc gccatttgtt atcccagttt
     8401 gggacttagc tgatgttccc gaagcccttt tactattaaa gaaaatttct gcttgacctg
     8461 taatgcatta cacagagtaa aataaaaaag tagaagaaat tagccggaag gggcgaacga
     8521 aatgactgaa gtgaaaaaac aatttccaaa aggattttta tggggtggag caactgctgc
     8581 gaaccaagtt gaaggcgctt acgatgtaga tggtaaaggc ctttccacag cagatatggt
     8641 caaatttatt ccaaaagaag aacgtacaca agatcatgca ttagacgtat ctaaagcaga
     8701 aatcgaagca attattgcag ggaaagtaga aggaagattc cctaaacgtg atggcgttga
     8761 tttttatcat cactataaag aagacatcgc attatttgcc gaaatgggct ttaaaacatt
     8821 ccgcctatca ctaaactggg cgcgtatttt cccgaatggt gatgacaaag agccgaatga
     8881 aaaaggcctt gaattttatg ataaagtgtt tgatgaatta ttaaaatatg acattgagcc
     8941 acttgtgaca ctttctcact atgaaacacc actaaatctt actttaaaat ataacggctg
     9001 ggctgatcgt cgcgttatcg gatttttcac gaactacgcg gaaacagttt tcaaacgtta
     9061 taaaaacaaa gtaaaatatt ggctaacttt taacgaaatc aatgttattt cacttagcgc
     9121 atacactggt gggggcgtgc tattagaaga cgcgaagaat ccacttgaac tttcttacca
     9181 agcaggacat caccaattcg tagccagtgc acttgcaaca aaattggcgc atgaaattat
     9241 tcctggatca caagttggtt gtatgttagc gcgcatggcg acttatcctg cgactaacaa
     9301 tccagatgat atcctaaaag cacaatatga aaatcaacaa aatctatttt tcactgatgt
     9361 ccatgctcgc ggtgaatatc caagctacat gaaccgtttc ttccaagaga acgacattca
     9421 catcgtaaaa gaagttggcg acgacgaaat cttaaaagca cacacagttg atttcatctc
     9481 attcagctac tacatgtccc tatccgcaac agctagccca gaaggcgacc gctctgctgg
     9541 gaacttaatg ggtggcgtga aaaatgaata cttggagtcg tccgattggg gttggcaaat
     9601 tgaccctaaa ggcttacgct ggacactaaa tgatctttat agccgctacg aattaccact
     9661 tttcatcgtg gaaaatggct taggtgctta tgatacagta gaagaagacg gcaaaatcca
     9721 tgatgattac cgaattgact acttgcgcaa acatatcgaa caaatgaaag aagcaattgc
     9781 tgatggcgta gatttaattg gatacacaag ctggggacct atcgacctag taagtgcctc
     9841 cacaagcgaa atgtccaaac gttacggctt catctacgta gaccaagatg actggggcaa
     9901 aggaacatta gaacgctccc gcaaagattc attcttctgg tataaaaaag taattgaaac
     9961 aaatggtgaa gatttagatt aataggtaga gtacagcccc gctttggcgg ggctgttttt
    10021 ttacgctact tcccacaaga aaccaatccc gcactcactg aacaaaaaaa ttcgattaat
    10081 cgccacatct ttcgcgcaga agggtccaat tcgggaaaaa atggcgtgca tcttctgtta
    10141 taattattca ccaaagacta gtaatatttt acgccaagtc atccaagata gtacagattc
    10201 aaggtgtatt taatgatgga ttatctactc agtcaaatta taaggagacg ataaaatgaa
    10261 acagagaaaa acctcattac tacatgtttt acttgtagta acagctatct tgggtattag
    10321 tttatgggta aatgccagtc acgggatgga agctcaggca gagagtattg cgcaaccagc
    10381 gccaattaac gaaattttca cggacccggc attagcagaa gcggtgaaga cagaacttgg
    10441 aaaagcagat gtttctgatg tagtaagtca agcagacttg gatcagataa ctaagattga
    10501 tgcagaaggg aaaggaataa gttcgttaga agggatacaa tatctaacaa atctcaactc
    10561 tttaagtgta acctccaatc agatttctga tatttccccg ctgacgaacc ttactaaatt
    10621 agactcttta tatttagggg aaaatcaaat aagtgattta actccgcttt caagattgac
    10681 cactctgaca ttcgtacaat tatctataaa ccaaataaaa gatgtgacac ctctagctaa
    10741 tctaacgaat ctaacttatt tagatttacg cgaaaatcaa ataagtgatg caagtccttt
    10801 agttaatatg accaacttaa ccgtattaca tttagaaaaa caacagataa cggctgatcc
    10861 agttgtatac caaactaatt tagttgcacc ggatattttg aaaaatgctt atggtgaggt
    10921 agtaccaccg acaacgatta gtaataacgg aacatttgct agtccaaata tcacttggaa
    10981 tttagatagt ttcacaagcg aagttagtta tgattttaat caaaaaatta cacttggtga
    11041 taatgggaag gtaacttttg caggaactgt tgttcaaccg atagtagaag caccggtcaa
    11101 ttacattact acatttgatg tggacggaac gacgacaacg gaaaatgtgg cagtggattc
    11161 tttaataacc gaaccagctg cgccaacaaa agaaggttat actttctctg gatggtatga
    11221 tgccgaaact ggtggaaatg aatgggattt tgcagtagat aaaatgcccg ctaccaacat
    11281 gacgctctac gcccagttca caataaatag ctacacggcg gcatttgatg tggacggaga
    11341 aacaactaat caaaaagtag attaccaagc tctactacaa gaaccgactg ccccgacgaa
    11401 agatggctac acatttgtag gatggtacga tgcaaaaaca ggtgggaatg aatggaattt
    11461 cgcaacagat aaaatgccag cgggtgatgt cactttatat gctagattta ctaaaaatgc
    11521 tagctcagac aattctcaaa tagcccccgg aaatgatgat aaaaacgata aagataatct
    11581 aacaattaaa gctaacgata gtgcaaatgc gacgagcact aaacttccaa aaacaagtga
    11641 cgattcaagt atggttccta ctgttttagg aacgctcttc atcggaggcg cattactaat
    11701 cttacgaaaa aaaactacta acatttaaga taaagtagat ttggtttcta ttttccgtag
    11761 agaccaaatt ttttgttaat taggtctaaa aaagggtatc tattattaat gatttattta
    11821 gaacaattaa tggttttaat ttaaataaaa ggagagagac tatgaaaaaa cgatggaatt
    11881 ctgtatttaa actagtttta atggtagctg ctattctcgg tattagtcta tatgtaacga
    11941 caagtcaagg ggcggaggtt cgcgcggaaa gcattgcgca gccaacccca attaatgtga
    12001 ttttccctga tccggctctt gcgaatgcag ttaaaacagc gacaggaaaa tctaatgtaa
    12061 cagatactgt tacgcaagca gatttagatg gaatagttac tttatcagca tttaatactg
    12121 gagtaacaac gattgaagga atgcagtact taaataattt gatagggtta gaacttaagg
    12181 ataatcaaat aacggattta actcctctta aaaatttaac gaaaataaca gaacttgaat
    12241 tatctggaaa cccgttaaaa aatgtaagcg cgattgctgg gttacaaagc attaaaacgc
    12301 tagatttaac ttctacgcaa attacagatg tgactccact tgcagggctt tccaatttgc
    12361 aggtattata tttggatctc aatcaaataa ccgatataag cccgcttgca ggactcacta
    12421 atttacaata cttatcaatc ggaaataccc aagtaagtga tttaacccca cttgctaatt
    12481 tatctaaact aacgaattta agagctgatg ataataaaat aagtgatatt tcgccacttg
    12541 cgagtttacc taaccttata gaagttcatt tgaaagataa tcaaattagt gatgtcagcc
    12601 cacttgctaa tttatcgaac ttatttatcg tcactttaac gaatcaaaca attaccaacc
    12661 aacccgtgta ttatcaaaat aatcttgtcg ttcctaatgt ggtaaaaggt ccttctggcg
    12721 ctcctattgc acctgctact attagcgaca atggaacata tgctagtcca aatttaacat
    12781 ggaatttaac tagttttatt aataatgtta gctacacgtt taaccaatca gtcgctttca
    12841 aaaatacaac ggttcctttc agtggcacag ttacacaacc attaacagaa gcttatactg
    12901 cggtttttga tgtggatgga aaacaaacaa gtatgactgt cggcgcgaat gaattaatta
    12961 aagaaccaac agcaccgacg aaagaaggtt acactttcac aggctggtat gatgccaaaa
    13021 ctggcgggaa taaatgggat ttcagcacgg ataaaatgcc agcagaaaat atcacattgt
    13081 atgctcagtt cacgattaat agttatactg cctcatttga caatgatggg aaaataacga
    13141 cgcaaaaagt cacttatcaa agtttgttag aagaaccagc agcaccaacg aaagcaggtt
    13201 atacgttcaa aggttggtac gatgctaaaa ctggtggaac taaatgggat tttgcgacag
    13261 gaaaaatgcc agcaggaaat attacgctat atgcccaatt cactaaaaat gatagcccaa
    13321 atccaaatga tccaacccct aataccccaa caggaaatgg tgatggtaca agcaatccaa
    13381 gcaattcagg aggcaatact acacttccga cagctgggga tgaaaatacc atgctgccca
    13441 tttttatcgg agttttcttg ttagggacag caacgctaat tctccgcaaa tcaatcaaag
    13501 taaaataaca tcgaaaacag ctgcggttta tagacttcag ctgttttatt agttaataaa
    13561 ttcatctaaa cgtcacaact aatcatgaac gggtctaatt ttagtgatta aacagaattc
    13621 tattaagtta taataaaata attcagctat gagtacactc acaatcctaa aaaatggaat
    13681 aatattataa aggagataag ttaatgaaaa gaaataaaac agcattacgt atcttggtaa
    13741 ctctggctgt agtaatggca attagctttt gggtagggac gagctcaaaa gaggaagtac
    13801 aggcggcagt aattgcacaa ccgacgccaa tcaacgaaat ttttacagat gagaatttag
    13861 caaacgcaat aaaagcaacc ttaaataaac ctagtactac atctgatgtt tcacaaacag
    13921 aattagattc tatacgtgat gtaaccgcag aaagtagcaa tatagcttct ttagaggggg
    13981 cgcagtattt aaataatata gatacattaa ttttaaataa taataaaata acggatttaa
    14041 attcacttgc aggactatct aaattaagga tattagaagc aaatgacaat caattaagcg
    14101 atataagtgc actagcaaat gtgacaagtt tgcaccaatt aagattagct ggaaatcaaa
    14161 taaaacagtt aaatggagtt agtaatttaa tcaatttaga aaccatagaa ctaagcaaca
    14221 atcaaataac ggatataagc ccagtttcag gtttgaaaaa cttaattggt cttggaatag
    14281 attataatga tatcagtgat ttaagcccaa ttgctggctt agcaaagtta agtcatttaa
    14341 ctgcagacaa taaccaaata agtgatttga gtcctatttc aagcttaggg gctatggaaa
    14401 ttatgcgact agatggaaat cagattagtg atgtaacccc aattgcgaat ttggctaatt
    14461 taaactatgt atttttagct gaaaatcaaa tcagtgatat tagttcttta caaccacttt
    14521 ttaattcacc caattttttt ggtattactt tagatgatca aaaaataacg agtgaaccag
    14581 tattgtatca acaagagctt gtggtcccta ataacattaa ggatgaaatg ggagcgttaa
    14641 tctcaccaga tacaattagc gataatggtg tttatgcaag cccgaatatt agttggaact
    14701 tggctaatta tactaaccaa gtaagttaca catttaataa acaattagca cagggttctt
    14761 ttagcggaac agtgattcaa ccacttcaca atgcttatac agcgacattt gacgtagatg
    14821 gagtgaaaac aaatgaagta gtggaagaaa cgaaattgct tcaagaacca acagccccaa
    14881 ccaaagaagg atacactttc acaggctggt atgatgcgaa aactggcggg aataaatggg
    14941 attttgcgac agacaaaatg ccagcagagg acatcacttt atacgcgcag ttcacgatta
    15001 atagctatac agccacattc gacatcgatg ggaagttaac gacgcaaaaa gtcacttatc
    15061 aaagcttgct agaagaacca gcagcgccaa cgaaggatgg ctatacgttc aaaggttggt
    15121 atgatgctaa aacaggtgga actaaatggg attttgcgac aggaaaaatg ccggcgggaa
    15181 atataacgct atacgcccag tttactaaaa atgccacccc agattccaat gacccaacaa
    15241 cggttactcc aacaggaaat ggcaatggta caagtaaccc aagcaattca ggtggaaata
    15301 cgacacttcc gacagctggg gacgaaaata ccatgcttcc catttttgta ggagttttct
    15361 tgttaggaac agcaatgctt attctccgca aaacaatcaa agtaaaataa caaaaaacag
    15421 ctgagatcta tagtttttct atagatttcg gctgtttttt tattagcaaa gaaattcatc
    15481 taaacgtcac aattaaaacg ataacaagtc taattttagt gattgaacga aaacctacta
    15541 cgctataata tagtaactca actacgagaa cacacaaatt tctaaaagca gaacgatcat
    15601 acaaaggaga tagtttaatg aaaagaaaca aagtaatatt aagaatcgta gtgactttag
    15661 ctgcagtatt ggcaattact ttttgggttg ggatgagctc aaaagaagta gaagcagcgg
    15721 taattgaaca accaacccct attaatgaaa tttttactga tccagtggtt gctgataatg
    15781 tgaaaacact tctcgaaaaa gcggatgtaa cagatgaagt tacgcaaact gatttagata
    15841 gtataaccca attatcagct aaatctgcgg gaataacaac gatagaagga atgcagtact
    15901 taactaattt atcagaacta gaactaacag ataaccaaat aaccgatgta agtccgctcg
    15961 caaatttaac gaaaataaca gagcttggat tatccggaaa tccattaaaa gatgtgagtg
    16021 cgcttgcggg attaaaaagt ctaacaacga tgcatcttat ttatacagat attaccgatg
    16081 tgactcccct tgaaggtctt accaatttgc aggaattaaa tttggatatc aatcaaataa
    16141 cggatataag tccactagca gctttaacta acttgcaaac attatcactc ggatataccc
    16201 aagttagtga tttaacccca attgctaatt tatctaaact aaccatatta aacgctgaaa
    16261 atagtaaagt aagcgatatc tcgccacttg ctagtttatc tagtcttaca gaagtttact
    16321 tgagagagaa tcaaattagc gatgtgagtc cccttgcgaa tattcccaac ttatctatta
    16381 ttgagttgac ggatcaaata attaccaatc aacccgtata ttatcaaaat aaaatcattg
    16441 ttccaaatgt gataaaaggc ctttccggtg agcttattgc acctgatact attagcgaca
    16501 atggagcata tactagtcct gatttaacgt gggatttaaa cagctacatt aatagtgtta
    16561 gttacacatt taatcaatca attgctttca aaaatacaac ggttcctttc agtggaacag
    16621 tcacccaacc attaacagag gcttacactg ccgtttttga tgtggacgga gagcaaacaa
    16681 gtttgacagt agttgtgaat gaattaattg aagaaccaac agttccaacc aaggaaggat
    16741 atacattcga tggctggtat gacgcagaaa cgaatgggaa taaatgggac tttgcggtag
    16801 ataaaatgcc tgctagtgat ataactttat atgctaagtt cactgagaac gaagaaccaa
    16861 atgctagtag ttcaattaat gtggaaccaa acgatgataa ttccatcaat gtagaacccg
    16921 acgctagcaa ttccatcact gtaaaaccaa cagaaaataa cgatggaaca aataatccga
    16981 acagttcagg tgatgataaa attaacatca agttaccaat tactggggac gaatggaatg
    17041 tgcttcccat ttttgtagga gcagttctta tcggaatggg cttagtttta ttccgcaaaa
    17101 aacgtcaaac aaaataattt gattactggc ttggcttctg taaatcatac agtagctaag
    17161 ccattttttg attagagatt aggaggatga gtttgtcttt ttatggaacg ggaaaacata
    17221 gagtggaatt caaagaaaga gggcgtaaac atggaacgac aaagaaaaat tcaaatctta
    17281 aaagacattg tgaatattga ttcgactaat gggcatgaag aacaagttgc gaactatttg
    17341 caaaagttgt tagctgaaca cggtattgaa tccgaaaagg tacaatacga cgtagacaga
    17401 gccagcctag ttagcgaaat tggttccagt gacgagaaag ttttggcgtt ttcagggcat
    17461 atggatgtcg ttgatgcggg tgatgtctcg aagtggaagt tcccaccttt tgaagcagca
    17521 gagcatgaag ggaaaatata cggacgtggc gcgacggata tgaagtcagg tctagcggcg
    17581 atgattattg caatgattga gcttcatgaa gaaaaacaaa aactaaatgg caaaattaga
    17641 ttattagcaa cggttggtga agaagtcggt gaacttggag ccgaacaact aacgcaaaaa
    17701 ggttacgcag atgatttaga tggcttgatt atcggcgaac cgagtggaca ccggattgtt
    17761 tatgcgcata aaggttccat taattatacc gttaaatcca ctggtaaaaa tgcgcatagt
    17821 tcgatgccgg aattcggtgt taatgcgatt gacaacttgt tgctatttta taatgaagta
    17881 gaaaaattcg tgaaatcaat tgatgctact aacgaaatat taggcgattt tattcataat
    17941 gtcaccgtaa ttgatggtgg aaatcaagtc aatagtatcc ctgaaaaagc gcaactaaaa
    18001 gggaatattc gctcgattcc agaaatggat aatgaaacag tgaaacaagt gctagtgaag
    18061 attatcaata agttaaacaa acaggaaaat atgaatctag aattaatatt tgattatgac
    18121 aaacaaccag tatttagtga taaaaattcg gatttagtcc acattgctaa gagcgtagca
    18181 agcgacattg tcaaagaaga aatcccatta ctcggtattt ccggaacaac cgatgcagca
    18241 gaatttacca aagctaagaa agagttccca gtgattattt ttggaccagg aaacgaaacc
    18301 cctcaccaag taaacgaaaa tgtttctata gagaattatt tggagatggt agatgtttac
    18361 aaacgaattg ccaccgagtt tttatcgtga tggaacttta actttactta ttttccgcta
    18421 taaaatacgc aattaaataa aagtctagta tttgtttgta aacaggtgct aggctttttt
    18481 cttgctttta atacagttta gtactaaact aataatatca agaggagggg acgagcatgg
    18541 taaaaaaaga agaaaggcta ggggttttgc tttggtttcg atttagtcga ttttacaatc
    18601 ggaatatgaa gctgaccaat cagaatttgc gagcggtagg aatttcgaca gcgcagtttg
    18661 attgcattgc ccaaattggc ttagacaaag agattacaca gcaacaactt gccgaaaaat
    18721 tagttgtaac gaagggaaat gttacccaac tcctcgcgaa attagaacaa ttaggttata
    18781 tcacgcgaac aaagacaggg cgcgaaaaac atattaccct cacagaaaaa ggccaagcgt
    18841 gttaccgcga aaacgtgcca aaacaagaag cttttcagca agctcaattt gataaattaa
    18901 caagagacga acaaaaagaa ctacttaagc tattaaaaaa attaggagag tgattattta
    18961 tgaaattaac gggaattcat cacgtatcta tttttacagc gaacgcacga gctaactttg
    19021 acttttatac aaaaataatg ggactacgac tagtgaaaaa atcggttaac caagatgacc
    19081 cttatacgta ccacttatat tacggagacg aaatcggttc gccggggaca gcgctaactt
    19141 tctttgaagt tccaaatatg gccaaaaacc acccatcacg caatgcgatt tctagcctca
    19201 gcttacgtgt tccaagcgat gaagccttgc actactggga taaaagactc gatgagcatc
    19261 gcatttttca cagtaaacca atcgaccaat tcgggcgcaa aattattcgt ttaaaagaca
    19321 cagatggctt accggtcaat ttgatttccg atgaaacaag cacacaagta accgaggtga
    19381 gcccttggga agatagcccg gttccagcag aatatgccat tcgcggactt ggcccagtgc
    19441 gcttctctgt tttcaaaaaa gaaaaaacag atcgtctttt gacaaaaata ttaggcttcg
    19501 agcggatcgg tgcctatgaa gatgacgata aattagttac agtattcaaa actggcgacg
    19561 ttgggcttgg cggagaagtg catgtggagt cgcgacctga tttagaacaa ggaaatttag
    19621 gtgctggcgg gattcatcac gtggcgtttc gtgtaccgac agatggcgac ttgattggct
    19681 ggacagaaat gattcaagac cttggctaca aaaattcagg atatgtggac cgtttttatt
    19741 tccactctct ttatttccgc gaaagcaatg gcattttaat cgaacttgca accgatgaac
    19801 caggtttcca aaccgatttc acgaaagaac atggaactta cgttgattta ccaccacatt
    19861 tagaaaatcg ccgcgaagat attttggctc atttaaaacc acttgataca gataaataaa
    19921 taagaaaacc ttgaaaatat gcctattcat gatacaattt tagaagaatg tgtaattagg
    19981 aggcagaatt ttggcagaag gtttacgtac aatttatttt gtaagacatg gtaagacgga
    20041 atggaatatg actggacaaa tgcagggatg gggcgattcg ccgctagttg cagaaggtat
    20101 tgacggggca aaagcagttg gcgaagtgtt gaaagataca ccaattgatg cggtttatac
    20161 aagtacaagt aaacgcacgc aagataccgc ggcttacatt cttggcgacc gcgaaatcga
    20221 aattcaacct ctggaagaac taaaagaaat gggatttgga acgtgggaag gcattagagt
    20281 aactgaaatt gacgaacaac accctgaaga acgcgcaaaa attctccata gcccagaaac
    20341 ctacaaagca gaagtgaacg gcggcgagac ttattatgaa cttgcagaac gactgttaga
    20401 aggcgtcgaa aaaatcattg cagaaaatct aagcggcaac attctcgtcg tttctcacgg
    20461 catgtcgctc acgttattat tatacttgct gcaaggcgga acggttgaag atcaccgcaa
    20521 agaagcgcca agaatcttga acacaagtat tagcatcgta gaataccaaa acggcgaatt
    20581 ttctcttaaa aaaatcaatg aaatcggtca tttagactta aaataagtag aatcttggac
    20641 atatctcatt ggaggtgtgt cctagattta tacataagag aaagctagaa aaagggagaa
    20701 aacatacata tgaaaagaat tgtcaaaatt tttctacatt atttattagg aattttagga
    20761 attattttaa tcagttgtgt tcccgcgata tttagcaaag tgacttcatg gtcatcaagc
    20821 acgtactggg aggctcttaa gtcaattttc acagcgattt tccacccaac caaatgggaa
    20881 attagttacc aaggaagcgc agaagttttt catgtctcgt tggcagattt tattaccgga
    20941 ccatatttct actccatgaa aattatcgta gcgagcttgc taatttcagc gattattgct
    21001 tatttactag tgattgcaac atttcgcggg ccaaaatggt tgcgccgagg cttaagcgga
    21061 ttcctatcga tacttcaagc ttttccagat ttttccttta ttttccttat tcaaatggcc
    21121 gtcgtctaca tatatcagca aacaggcgtg ttcaccttga atttttacag cttaaacggc
    21181 gagcaaattt atgcagcacc aatcgtctgc ttatccatca taccaaccgt gctcttttac
    21241 aaaatgatga tgctccttat ggaaaatgaa tggcaagctg actacatcca actggctcgc
    21301 gggaaaggct taaccgatag agcgatacta cttcgccatg ccacacccaa tatgatgcaa
    21361 agcctatttt accaatccaa aaccatcgtt tggtttattt taagcgccta cctcgttgta
    21421 gaatttttat tcggtatcga aggcgtgctc tactatttac tagcaggatt tagcccatta
    21481 aatattttcc tagtattagc actcgtgttc accccatttt acttctttta cgcactaata
    21541 gacctatgga ttagccgtgg gaaaaatacc gagagcgcaa acgtgacccg aataccgctg
    21601 cactggaata gtttccagaa agcctttacg gaaaaagtaa accttaaaag caaatggcgc
    21661 aactttgtag taacgaccgg gcagctccta aaacgcccat ccttcagcat tccgctggca
    21721 acacttagca tcttactaat cgcgagcctt atttacgggc ttatgggaga caaaatcaac
    21781 tcgcttaaat ttatcagtga tgcgaccgga cgagtgaccg atatggcgcc cttcaaacca
    21841 aatgcgcaag tatggctagg caccgaccaa gccggcaact ccattctcga ccaattactc
    21901 gtcggcatca agtatacgct acttatagct gtcatcatcg caacgctacg tgtcgtgatt
    21961 ggttacattt tggcagtacc gctcgcattt ttcagcaagc cacgaacccg caattttgtt
    22021 caatcgatag cggacggaat gcattatcta ccactgtcat tactcgtctt tattatcatg
    22081 gtcaacgaat tcatcagcta ttctggcgtt ttcgaaacaa gcctatttac acgcataacc
    22141 ttccaaattt taatcatggt tgtcatcgtt ttaccaatta caaccaaccg aatcagcagt
    22201 gaaatttccc aggtgttaaa aaaagagttc gtcttgagtg cgctcgtttt tggcggaaat
    22261 gctcgctgga tattaaccaa gcatatcaat ccacaaatct ggtccaaatt aattttgatt
    22321 tggattgagc agctcattca aacgctacag atgttcgtcc atttagctat ctttggaatt
    22381 ttcatcggag gggcaatcat gggcgccgat gacggcatgc taaacccagt tatccctgaa
    22441 ttatctggtt taatagcaaa cgctaaattc gtgttcgcca accaccaatt ctggataatt
    22501 ttacctccat tagtggtatt tatggtttta attctttgtt tccaaattat ggcaaattcg
    22561 cttttgaaac gagaagaaga aagtaaaaaa gcctagttct ataaaagaac taggctatta
    22621 ttatttaagg agtgactgtt tgatagacag tcactgtgac agaagggtaa gttggatatt
    22681 gattatttaa aaagtaagcg gaattatcgc ctgcattttc ccaagtaagt gtatcatttt
    22741 ggtaagttcc tggggtgtac caaacccaat catgtaatgt tactccgaga ttatctttca
    22801 ttacaatatt agtggaatcg ccgagcgcaa catctggaag gtatatattt tgtccagtag
    22861 catcaaacaa ttctaagcgg tgacctgcca atgagctgaa atcactaatc tgattttctt
    22921 caatttttat tgacctaatt gttggaatgg tactgagagg tgtaacatct ttaatttgat
    22981 taaaattagc atcgaagtat tctagttttg ttttatttct taatggctca atagaagtca
    23041 gttgattgct ttcggcataa aaaactcgga gattatcgca ttctgaaagg acactgatgt
    23101 ctgatatatt atttgctgaa atagataaat tagttaattg aggagtatct tttagggccg
    23161 aaatatcttt tagttgattg ctacttagat ttaatatcct taaattagtt aaattttcga
    23221 aggatggtaa agtagagatt tggttaacgc ctaattctaa gttatataat ttaggtgagt
    23281 tcattagtgg agtaatatct gtaatttgat tgtagttaag tgataccgtt tctaattctg
    23341 ttaaattagc gagattctct aagttgctaa ttttattttg gcttaaatct acaaatttta
    23401 agttgtgtaa atattccatg cctgttaaat cttccacacc gaaatccaca tataccattg
    23461 tttcgatagt atctagttgt tcttgtgtaa cgactgtatc ctcggaaaca cctagttcct
    23521 gtgcgacttt aaaagctaga gcatcatctg ggaaaatttg atcaaccgtg gctggaggag
    23581 cttcttgtaa atttttttct ggggcagtgg caatgtttgt tgtagcagcg cttacttcga
    23641 cttgtcctac caaaggacta aaactaatca aagtcgtaca tgcaaggctt gctagaataa
    23701 attttttcat gtcatcctac tccttttcta taatataaat ggagtatagc atgcaaatta
    23761 tttaaaaata aaaagccatc acatatgaac attgcataaa aaaaccgcta aaaagagtat
    23821 gcttcttttt agcggttttt tctttattca atttcctcta tagatttatc taaccataac
    23881 tcataccatt caagaaagcc taaacgttct tcattcccaa agtaaaaatc aggatagacg
    23941 ccattatcat tatttctgtc atccacccaa atttctccat aagaaggacc gtttacaaca
    24001 aggttaatcg aaacgccaca accaaaatta gcgatacgca gaagtccaaa tacttcttta
    24061 tcttggaagc acagttcttg ccaagcatca taatcttcat cggacattcc ttctttataa
    24121 ccaggagcgg tccaatcatc tgtatgtgga aaaggctcac ttaatgtttg caccccgtac
    24181 ttttcatcct tgtaatcaag cgaggcgcaa agcccgtccg caagtgtttc taagccataa
    24241 taaggaccca ttccaccatt accaatttgc tctagaaaag cgcgataatc ttgaggtaag
    24301 gtaatttgat gctcattctc aaactcggta agcgtttgat tagacaatgg ttgattaagt
    24361 ttataggcgt ggctttctga accaaataaa ttcaaatcgg gatctttttc ttttaacgca
    24421 gtgatttttg cttggattct agctagccaa tcttgaaggt cagccatcat ttataaatct
    24481 gctccattag tttcaatcac ttgtttatac cagtaataac ttttcttcgg aatacgtgtc
    24541 attggcgcat catcttccac atcgcggtca acataaacaa aaccgtaacg tttttgatag
    24601 ccgtttaacc agcttagaag gtctgtgaag ctccaagtac aatagcctaa catatcaaca
    24661 ccatcactga ttgcatcgcg aatagcagtt gcgtgcgcgc ttagatagtc aatacggtag
    24721 tcatcgttta cttctccgtc cactaattta tcaaattcac ctaaaccgtt ttctgtaatt
    24781 aaaattggta aagcatagcg gctgttaata cgacgaagcg caatttgtaa gccttttgga
    24841 tcgattgtcc agtcccagtt cgttgttttc acaaaaggat taacgacttt tttgtaaacg
    24901 ccagggacac cagtttcttt cgtgctacct tttttaccag tgaagttcat ttcgttgttt
    24961 tgaccaacgc catcaagcgg gttgtaagca acagttgcgg attggtaata gtttacgccc
    25021 atgaaatctg gttttgcaga agcaagaagt tccatatcgc cgtcttcgat aactggcgca
    25081 atatcgtttt cttctaaata tttccaaacc gctttcggat agcgcccaaa agcatacata
    25141 tccatccaga aataactgtt taattcttct gcatcgtcgg cagcttgaac gtttttagga
    25201 tctgtgtcga ttggataatg tggtgtgtaa gcaaaacttg gtccaatttt tccatcagga
    25261 acgatttcgt ggaaagcttt gataacactc gcattagcta agttcgcaat gtggtttact
    25321 gcgtacattc tttttggatc gctaactttt ggtgggtgaa gcgcttgacc ataacccata
    25381 ccaacaaaga tattttgctc attcaaggaa acccaatatt tcacgcggtc gccgtaacgt
    25441 ttgaatagcg ttgtggaata atttgtgaaa tcttcaataa cttggcgaga ttcccagcca
    25501 ccgtattcat caaataatgc ttgtgggata tcccagtgat aaagcgttac aagtggttca
    25561 atgtcatatt taagcaactc atcaattaag ttatcataaa atttcaagcc agcttcattc
    25621 acttcgcctt taccatttgg aaaaatacga gtccaagcga tagagaaacg gtaagctttt
    25681 aggccagcgt ctgccattag ttttacgtct tctttataac ggtgataatg gtcgacagct
    25741 acatcgccat ttgtaccttt gaaagtagtt ccaggaatgc ggacatattc gtcccaaact
    25801 gatttacctt taccgtctgc gtcccatgcg ccttcgattt gataagctgc cgatgcagaa
    25861 ccccataaga aatctttcgg gaatggtgaa cgtttttgat gttccattaa tataacctcc
    25921 attaaagcga tttttattaa aaaactctac taatatattt taaagtatat tcttttaaaa
    25981 agatagttaa aaaacgcaga ttcctattcg aatctgcgtt tttgttttat ttatccagca
    26041 caaatttttg aattgctttt gctacaccac tatcattgtt cgatgcagtc gtatagtcag
    26101 ctaattgctt aattctttct ggagcattgc ccatcgcaat accaagacca gcaaattcaa
    26161 gcattgtaac atcattttct tggtcgccaa tgcagataac ttcgctttgc ttaatgccaa
    26221 gtttttcgga aagttctttg accgcgttac ctttactagc gtcacgattt agaatttcca
    26281 agtagaaagg cgtgctacga actagatgat atttttcgcg gaatgattct gggattttcg
    26341 caataccaac ttctagctca ggggcttctt caataaacat tgcttttgac ataataaaat
    26401 cttctggcac gttttcgatt tctttataaa tcagttggct accagtaaga taagcttcga
    26461 caatcgtgta tttgccgatt tcacggttcg gcgtataaag cgctttgtca tcaaagaaat
    26521 gcatgtgcaa attgctatct aaactcactt gataaatttc ttttaaatcg tcaatgccaa
    26581 gcgttaagtg agaaataact tcttttgtaa acgtatcttg aacaaatgcg ccgttaaaac
    26641 taataacgta atcgccttcc tcacgtaatt caaggtcagt cagataattt tctacaccaa
    26701 caagcggacg tccagtacaa agaaccactt ttacgccttt tagttttgct tggcgaatgg
    26761 cttcttttac ttcgtccgta accttatgat catctgtcag tagtgttcca tcaatatcaa
    26821 tcgcgattaa tttatacaat atactagctc cttttccatc ataaactcat tctagtatag
    26881 cataaattca gatggatttc tggctatcta ttgaaacaac agggaattta tggcatgatt
    26941 gacttggaaa cttgataaag aaaagagtga aataatgaaa cgtaattatc atgtgaaatt
    27001 tttaaatgaa aaagatgtag aacttgcaga agctgtttgc gcggcatccg aagattatta
    27061 tttaatggaa caagataagc ctgcatcgaa aagtgatgca ttaaaaatta tcacagaaat
    27121 tccaaacggg aaaacaagat tcgataagtt tgtactagct gtattggatg aaaatgaaaa
    27181 accaatcggc ttagtagata ttgtttctga ctatccgcga aaagggcgct ggtttatcgg
    27241 attacttctt ttaacgccag atgctcgtca taacggcctt ggaaaagtac ttcatcaaac
    27301 gatcaaagag tgggcgaatg acggcggggc agattcatta gccttaggag ttttagctga
    27361 gaatgaaaaa gggcgtggat tctttgaata ccttggctac acgaaagaag aaaccaaaca
    27421 agctaattat ggcggaaaag aacaagaagt tagtattttc actttagcga ttaaataaaa
    27481 aaaggatgca gctcataaaa ctgcatcctt tttcttagtt tatgctattg tttttttctg
    27541 aaagagcttc catgttaata cgccattgca gttttacttt tgaaataatc ccggcttctt
    27601 ttaattcttt aagttgagaa tagaagaagg ctttcgacag ggtacagtag tttttaatga
    27661 ctgtcgtact aatagatttt ggtagtactg cgacgccgtc ttccactgga atatcgagga
    27721 ttttgacaag catttcaaat acaaaagcca attgatcttt tttatcgcga tattgtaaaa
    27781 gtgatttgta gtaaccatgt ttggcgatag ttctcataat tgtgtattgg aagctaaagt
    27841 tttcagggaa gagagagagc gagtattcga tatctttctt cttgtagata atcaattcgc
    27901 actcagttag tgtttgatac gttaaaacaa gggatgcatt atcgaaaatc gtataatatc
    27961 ccatgaaaaa attagatgtg aaaatagaat aaattttatc attgtcgaaa tcaatatatc
    28021 cggccaatat accagattta agtaaataca cacaatcccg attttcagta actagatcat
    28081 ttagaatggt atgttcaggt attgtgatgc tgttagattt taaattgtat tgttccatca
    28141 ttgcaacaaa ctctttgtga ttaaatggat aggccatttt ttacttcgtc tccttcagat
    28201 tcagttgtac taatacaaat acattgtatc atcgtaaaag tttgcacaag tactaaaaat
    28261 agacttctaa aaaacctctt ttttatgaaa ataccctttt ttagccaatg taaccgcaat
    28321 atttttgtca tatttgagtt atttctaact cagaaaggtt aaccaatacg catagttgga
    28381 aaaagccaat aataaagtcg tatctttatt attggctttt cgtataagca taaattattt
    28441 tccgatagaa taactggagc cgttgcctgt tacaacgacg gttttattac gatctgttcg
    28501 ataaactttc gcttttgctt ttgtcaatgt gttaacggtt tgtgaagtgg ggtggccata
    28561 tccatttttc ccaacgctaa taatggcgta ttttggttta acgacattga caaacgcttt
    28621 gcttgttgca gctttggaac cttgtgtact tacttttaac acgtcagctc gtaaggtttt
    28681 ctttgcctta atcatatcgt tttctgcttt tgtttgcgca tctcctgtga aaaggaaggt
    28741 gtttttctta tatgcgacgt ggagaacagc actccagttg tttcgatctg tttttccgta
    28801 agttttaaca ggaccaacaa actgcgcatt tactcctttg acagggagtt ttacgcctgc
    28861 ttttgcggtt ttaatggtta gttttttctt tttcgccgtg ttcacaaaat ttttgtaagc
    28921 ggctgttgtg tttgtggatt ttggtgcata aaggcttttt accttgatat tattcatgac
    28981 ttctggtaat ccaccaatgt tatccgcatc tgaatgagaa gcaatcatta tctcaatatc
    29041 ttttactttt aattttttta aataatttac aaccgttttc cctttacctt tgttacctgc
    29101 atcaattaaa atatcttctc cactaggtgc tttgatataa atggcatctc cttgaccaac
    29161 atcaataaaa tgcactttta tagttggtgc agcagcttca acttgcatag aacttggtac
    29221 ggaaagcccc gcaattaaag caaaaactaa taatacgttt aaaatccctt ttttcatccc
    29281 ttttcctctt ctcttatgaa atgaattctt ttagaaattt gtaaacccca tctgcttcat
    29341 tcgtgtcagt aagatgatct gctgctgctt tgacattatc gcttgcattt gccatcgcaa
    29401 caccggttcc agcatattgt agcatgccaa tatcattttc gccatcacca aaagtaataa
    29461 ttctttcgcg tggaatattg taatgctttc caagcgcttc aacggctgtt tttttgtcag
    29521 aattagcagg aagtatttct aaattattat ggtgtgaaga aaggactcta ataccattcg
    29581 cttcatttag agcagcgcga acttcggtta gttttgaggc atcatcttcc gcaacgacaa
    29641 tagcatttaa aaattgatgc atgttttcat caaaaacacc tttttcatta atagaaacaa
    29701 gcgaaaaact attgtgtcct gtatctaagc gacttttatc agcaagattt tggaagaaag
    29761 caggtggttc ttttgtatag aaaagtgtat tggtagagaa gaaaaaaagt ggtagatcga
    29821 agtcgctcat aatatcgtaa gtggagcgaa ttgccttctc ttctaaagtg gttttaagca
    29881 gttgttcatc gcgaatagcc gcgtaggatc cgtttgaggc aataacatga ccggaattac
    29941 tcacttggaa gccaacttca cgggcagagc gatacatccg tcctgtagaa atagaaaaaa
    30001 tatggccatc tttttctaag gtttggatta aatcacgcgt ttttatagag acagtttgat
    30061 cttggcgcag taatgtgcca tcgatatcgg aacaaatcaa atacttttta gtcaaataaa
    30121 atcatccttt ttagttaata acttaagtat accatgtgcg aatcggaata gttattatga
    30181 tacaatagtt tttatcgagt tctaaaataa ttttttggag gagttccatg atgggaaatt
    30241 taaactgggc aattcttgga ccaggttcaa ttgcacacga atttgcagaa ggtatgcgag
    30301 gaatgaaccg tgaaatttat gcggtaggag cacggagttt agagaagggg caagcattcg
    30361 caagtcaata cggaatagaa aatgtatacg atgactttga caaaatgctt gctgatccgg
    30421 cgatagatgt agtttatatc gctacaccac actctaacca ctatgaattt atcatgaaaa
    30481 gtttacataa cggcaaacac gttttagctg aaaaagcgat aactgtaagt agcgaagaac
    30541 ttaatgaaat caatgtgcta gccaaagaga aaggcttaat cgttaaagaa gcaatgacca
    30601 tattccatat gccgctttat aaaaagttac gagaaattgt ggaatctgga gcaattggta
    30661 aattgaaaat tattcaagtt gcttttggaa gtgccaaaga aaaagatccg aaaaaccgtt
    30721 tttataatat ggatttggcg ggtggagcat tacttgatat tggtacgtat gcccttagtt
    30781 ttgctcggta ttttttaagt gaaacgccgg atgaagtatt aacgacgatg aagaaattcg
    30841 aaacaggtgt ggacgaacag tccggaattt tactgaaaaa taaagaagag gaactagcgg
    30901 ttgtatcgct atctttccgt gctaaaatgc caaaacgagg tgtcattgct tgtgaagaag
    30961 gatttatcac tgtagatgaa tacccgcgtg ccagccgagc aactgttaca cacacggcaa
    31021 ctggaaaagt ggaagaaatt gaggttggtg aaacaagtaa agctttagaa tatgaaatta
    31081 tagctatgga agagagcatc gcgacaggag aaaacacgac ttatcagtta acaaatgatg
    31141 ttatcacgat tatgagcgat gttagaacgc agtggggaat taaatttcct tttgaaaaat
    31201 aagaaaaccc gccgagcttg gcgggttttt ctaagaatat taatcagtta agttatcttc
    31261 tgtttctggg tcgaagaagt gagatttaga catttcgaat gctaaagtca gtacttcgtt
    31321 tggttggtgt tccgagcgag catcaacacg tgctacgaat tcatgtgtac caacgcggct
    31381 atgaagcata aattcagcac cagtaagctc ggcaacaata gtagttgctt tgaacgtata
    31441 accaggatta gcttcaataa cgattggctc atcatgaata tcttctggac gaataccgaa
    31501 aacgatatct ttaccgtcaa accctctatc tttaagaagt tttaatttgc cttctggaac
    31561 ttcaatagtg aaatcatcac cgataaagtt agaaccttct aaacgccctt tgaagaagtt
    31621 cattgctggg cttccaataa agccggctac gaacatattt actgggtgat cgtaaacttg
    31681 ttttggtgaa ccaacttgtt ggataacacc gtctttcatg ataacgatac gagttgccat
    31741 tgtcatcgct tctgtttggt catgggtaac gtaaatcatt gtagtatcta attgttggtg
    31801 aagttttgtg atttccgcac gcatttgcac acgtaatttc gcatccaagt tggaaagtgg
    31861 ttcatccatt aggaagactt ttgcgtcacg aacgattgca cgacctagag caacacgttg
    31921 acgttgacca ccggaaagtg cacttggttt acgttttaag tattcagtta agccaagaat
    31981 atttgctgca tgctcaacac gttttttaat ttcgtctttt ggcattttac gaagttttaa
    32041 accgaatgcc atattatcat atacagtcat atgcggatat aatgcgtagt tttggaatac
    32101 cattgcgatg tcacggtctt ttggcgcaac attgttcatt actttaccat caatagatag
    32161 ttcgcctttt gaaatttctt ctagtccagc aatcatacgt aaagttgtag atttaccaca
    32221 accagatgga cctacaaaaa cgatgaattc tttgtcatcg atttctaaat taaagtcaga
    32281 taccgcagtt actttgttat cataaatttt ataaatatgt tctagtgata attgtgccaa
    32341 ctttcttcgc ctctttctat tttttaactt gtgttcattg tatatgaaaa cgctttacaa
    32401 aaactatggc aatttgcaca aagaaaaaat tcatctgttg ggcaacttgc ataagtagca
    32461 aaaaaataaa aagaagtaaa gggacaaaag accttttatg tgaaagattt ttcacagcgc
    32521 ttaattcttt agtcccaatt ccggaaattc ctcagatatc attacaataa aacttcatct
    32581 tgtgttatat tattaaagca gacacaatat atagttagtg ggggattatc atgtacgtgg
    32641 aacaacttaa tgaacaaatg gtaataaaaa gggacggccg taaagcaaac tttgatttaa
    32701 ttaaaattcg taatgccgtt gaagcatcta tgaaagcaat taatttagag gacgagactt
    32761 tcttagaaga gattttgctt gaggttgtaa gtgaattacc taacaaggca gatatgacca
    32821 tcgatgaaat ccagcattgc gtcgaaaata ctttaatgaa atcgacgtat cctgatgtag
    32881 cgagggctta catagagtac cgccatgatc gcgaccatga gcgtgaaaac atcacagata
    32941 tgcacaaaag cgtagaaaag ctactacaaa aagacaaaac agtagtaaac gaaaatgcca
    33001 acaaagacgc gactgtcttt aatacgcaac gcgatttgac agcaggagcc gtagcaaaaa
    33061 gttacgcatt aaaatacatg ctaccaaaac acgtatccaa cgctcattta aaaggggaaa
    33121 ttcattttca cgatttagat tacagcccat accatgcgat gaccaactgt tgtttaatcg
    33181 acatcgaagg aatgctgtca aaaggattta cgattggtaa tgccaacgta gaaagcccga
    33241 aatctatcca aactgctacc gcacaaattg ctcaaataat cgcaaacgta gcaagttcac
    33301 agtacggcgg ttgttcggtt gaccgtattg atgaagtttt atccgtttac gcgcgtttga
    33361 actttgaaaa acataaaaaa gatgcgatgg aatgggtcgt tccagaaaaa caagaaggct
    33421 atgcagcgga gaaaacacgc aaagatattt acgatgcgat gcaaagctta gaatacgaaa
    33481 tcaacacatt atatacaagt aacggccaaa caccgttcgt aacactaggc ttcggtcttg
    33541 gtgaagattg gtttgcccgt gaaattcaaa aagccatcct aaaagtgcgt attggtgggg
    33601 ttggtaaaga taaacacacg gctattttcc cgaaattagt attttcgatt cgccgtggaa
    33661 ctaatttaaa tgcagaagat cctaattatg acattaaaca attggcgcta gagtgttcct
    33721 cgaaacggat gtatccagat gtactcaact acgattcact cgttcgctta acaggcgatt
    33781 tcaaagtacc aatgggctgt cgttcgttct tgccagcttg ggaaaacgaa aacggcgaac
    33841 acgtgaacgc gggaagaaac aatcttggtg ttgtaacact taacattcca cgtatcgcta
    33901 tccaaagtgg tggggacaaa gaacgtttct gggaaatttt ccacgaacgc atgaaaactg
    33961 tcaaagatgc gctacttttc cgtttaaacc gcgtacgtca agcacgtcca gaaaatgcac
    34021 caattttata taaatacgga gcatttggca aacgactaca agatggcgaa aatgttgatc
    34081 aacttttcaa taaagaacgt tctactatct ctatcggcta tatcggtctt tatgaagcag
    34141 cgactgtatt ttacggcggg gaatgggaag gcgacaaaga agcaaaaaac ttcacgcttg
    34201 atatcttgaa agaactaaaa ggttatgcgg acaactggaa agatgaatat ggctactggt
    34261 ttagcgtata ttcgactcca agtgaaagct taactgaccg ttttaaccgt ttagacaaag
    34321 aaaaatatgg tgtaattaaa gacatcacag ataaagacta ctaccaaaac tctttccact
    34381 atgatgttcg taaaaaaatt accccatttg aaaaaattga ttttgaaaaa gattatccag
    34441 aattttgctc tggcggattc attcattatt gtgaatatcc aaaaatggtt cacaatacga
    34501 aagcacttga ggctgtatgg gattactcct atgatcgtgt agcttacctt ggtacaaata
    34561 caccaatcga taaatgttac gaatgtaatt ttgaaggtga atttgttcct acagaagaag
    34621 gcttcaaatg cccaagctgt ggcaacaccg accccgaaaa agcagatgtt gtaaaacgta
    34681 cttgtggcta tttaggcaac ccaatgaaac gtccaatggt tcatggacgt cacgtagaaa
    34741 ttagcaatcg cgtgaaacat atggagaact taggtgaata atccaaaacc gtgtgaatgg
    34801 aagtcgaatg aattatccag agggtatatc gccgactata aggcattcaa ctttgtcgac
    34861 ggagagggcg tccggtgcag tctatatgta tctggatgtc ctttccactg cgaaggctgt
    34921 tacaacaagg ctgcgcaatc atttaaatac ggcaaacctt acacgaaaga attagaagac
    34981 gatatcctaa aagacatcgg acatgaaagc gtccaaggcc tcactttact tggcggagaa
    35041 ccatttctaa acaccgccac atgcctatct gtcgtgaaac gaatccgcgc aacatacggc
    35101 gaaacaaaag atatctggtc atggaccggc tacacctggg acgaaatgat gcaagaaacc
    35161 gccgacaaac tagaacttct atccttaata gatgttctgg tagacggccg cttcgaacaa
    35221 aaactattcg accccaacct agcattccgc ggttccagca accaaagaat tattgatgtg
    35281 cagaaatcac ttgctgctgg tgaagtggtt ttgtatgagt tgtgaaatat gccctctttg
    35341 atggagggct tattcttttt gctttggatg cttattgaat atatgtgcgg gcatagaatc
    35401 aacaatgtaa gaatgatgat agtactaatc caaataaaaa acgccaccca taactcaggt
    35461 ggcgtttttt aatcaacaaa ttgtctagct ttcacataat cgtacaattc cttatttcta
    35521 acaacccatt ctcttccatt tttccaaatc ttaccttggt cttttaaaag ggttaattgt
    35581 ttgtaaaaac tgcttttcga tagattgcta taagcagcga tagtactagt tcgcatttct
    35641 ttcggtaaaa taacactatc tttttcataa agcgttccgt gtaatttgcc catattagaa
    35701 aaagaaagct ctaatttatc agaagaacta gtctcggcga aaaggctttt gaagaatgca
    35761 tgtcgcgcca agtctcgcat aatgaaaaat tgaaaaccaa aattctctgg aaacatcgaa
    35821 agaaagtact ctaaatcttt aaaagaatat ttgtaaatag tgcacgggga aatggttgta
    35881 aacagaaagt catctacatt tccttggaac aaactatagt aatttacaaa agagccttta
    35941 cctaagactg tataaatact actagattgc ggattcatag aaatagacac gaagccttct
    36001 acaattaaat agacatggtt atttctttgc gaggcagtat ttactaaatc tgtatgt
//
LOCUS       DASDYK010000014        35608 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.014, whole genome shotgun sequence.
ACCESSION   DASDYK010000014 DASDYK010000000
VERSION     DASDYK010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 35608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35608
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.014"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(162..632)
                     /locus_tag="U0308_000751"
     CDS             complement(162..632)
                     /locus_tag="U0308_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEM2315740.1"
                     /translation="MERAFFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRE
                     TSQNAVTHAELLAIQDACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAK
                     DPKAGTAGSLMNLLQDDRFNHTCEVEAGLMEKESSEMLRSFFQDLRKRNKLNRS"
     gene            827..2404
                     /locus_tag="U0308_000752"
     CDS             827..2404
                     /locus_tag="U0308_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl--CoA ligase"
                     /protein_id="HEM2315741.1"
                     /translation="MNSENLIAPELYNITDEIAKFSSEKTALIWKNEHNETKNWSYRH
                     LLEQANKFANVVKDAGIKKGDHVIVMTPRLLETYAIYMGLWKAGAIIIPASELLKAHD
                     LEYRIHHANVKAIVSYNGMTAEFDKIESIPSVSKKIIVGEKLSGWDHYETLMEAASTE
                     FERVETSRDDACLLAFTSGTTGNPKGVVHIHGWGYAHIRIAADHWLDIHEDDIVWATA
                     GPGWQKWVWSPFLSVLGKGATGFIYNGRFIPEKQLHLLEEEKINVLCCTPTEYRLMAK
                     VNNLREHDLSSLRSAVSAGEPLNREVIQVFQDNFDIKVRDGYGQTESTLLIGTLVDTP
                     IRPGSMGKPIMPEYMAIIDAEGNPVGVGEIGDIAMRRDFPALFKEYYKEPERLQKAIR
                     GDYFVSGDRAIRDEDNYYWFQGRNDDIIISSGYTIGPFEVEDALTHHPAVKEVAVVAS
                     PDEIRGTVVKAFIVLKDGYEGTEDLVHELQTFTKEQTAPYKYPRRIEFVEALPKTDSG
                     KIRRVELRDAEFASVHG"
     gene            complement(2446..3165)
                     /locus_tag="U0308_000753"
     CDS             complement(2446..3165)
                     /locus_tag="U0308_000753"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HEM2315742.1"
                     /translation="MKIIVEKDYENMSKTTMQLLLGKMYQDKLVHLAITAGSTPKRMY
                     ELIVEEMKEKAPLTNVSYYNFDEIPIGDEKYGVTIANLKAMYFDPAGIPEEQIHMLDT
                     KNYTDHEAHLKAVGGLDAILIGIGEDGHFCGNLPGVTKFGDETRLVSVQSRPDMFDIL
                     LGEVGGDVEKVPEYYVTMGPKSVMHAKEVILFANGKKKAAIIKKALQGPVTEDIPSSI
                     FQLHPNFTVVLDEEAASELNI"
     gene            3245..3979
                     /locus_tag="U0308_000754"
     CDS             3245..3979
                     /locus_tag="U0308_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2315743.1"
                     /translation="MEPLFSIGEMAKKSQLSIQRLRYYDKIGLLVPAFTDPTSGYRYY
                     KTAQEEQLNLIQALQYMGFSLQELKQYLDKNTSESLPDLLIKYQQKLMDEEARIARKK
                     WLIDRYQGLLKRETDTTKPLTAVRLLLTEPLLTPVHADILNDPAFHQEVQKTVSRLGL
                     SKSYQQFPGYCILDGQTYLFIELDHSIGAPGERRLLSSERQAFVTPQNWETPPENENY
                     LLQETVAWINQELVRGYSYETKLTFE"
     gene            4033..4494
                     /locus_tag="U0308_000755"
     CDS             4033..4494
                     /locus_tag="U0308_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2315744.1"
                     /translation="MEIKQIKAKDTQDIRHRVLRPEQPEENAIYPNDDMEGTFHLGAF
                     EKDVLLGIASFYPEKSTVIMNPAQYRIRGVATERRMRLKGLGTALLADGEAKIWKRGA
                     DIIWCNARIVAVGFYEKHGYRKVGKSFVIPGIGEHYLMKKVNPNKKVDQDN"
     gene            complement(4514..4957)
                     /locus_tag="U0308_000756"
     CDS             complement(4514..4957)
                     /locus_tag="U0308_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/extradiol
                     dioxygenase family protein"
                     /protein_id="HEM2315745.1"
                     /translation="MAKMYPYLAFENAKEALGYYEEVFGATNISRLPVSEEQSEMFGL
                     AKENLENTTVHGGFTVLGANLFCSDSFGKEVKPSNQISIMLDSNSEDPAAVADADAFF
                     EKVSSSERVTVTLPFEEQFWGGKMGQFVDEYGISWMIHTQPYSKL"
     gene            complement(5015..6367)
                     /locus_tag="U0308_000757"
     CDS             complement(5015..6367)
                     /locus_tag="U0308_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM2315746.1"
                     /translation="MKEQSKRLGEDSIPSLMARLSIPAFIGMFVMGMYNIVDTIFVSY
                     GVGPSGVAALSIAFPVQMILMAMAAMFGIGGASIISRSLGAGEQKQADKVFHQVIWLV
                     LISSIFIAIVTFIFLDPLITLFGAPADIHDIASDFLSLILLGAVFQTFAMAMNNIVRS
                     EGNAKTAMLTMIISAILNMILNPIFIMGFGMGVRGSALATVIAQAVGAIWLLIYFLSG
                     KSTLSLKGFSFRMDFPLIRRIMAIGFPSFIMMSAGSIVTVAVNWMLNIYGGTMAIAVY
                     GIANRIASFVIMPINGVTQGMQPIVGFNYGSRQFERVMKAVKVSMIAATVMSLIAWGL
                     VEIFPGMLVRIFSNDPELIAQGTNAVRFMLLAAPTIGFQIVCGGLYQALGRARISFII
                     SLMRQIICLVPLLLILPQFFGLDGIWYAFPLADLGAFTVCLVIMSKTWRRIFKNPEIV
                     "
     gene            complement(6364..6813)
                     /locus_tag="U0308_000758"
     CDS             complement(6364..6813)
                     /locus_tag="U0308_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2315747.1"
                     /translation="MADRQESLAKAIAIIHRSESTFKNKKLLETGLNIGQLRYLWTLY
                     KEDGISQESMAKRFMVDKASVTRHIKRLEELGMIRREIDAKDRRIQRIFVTETGFQMR
                     DLIEEVTAEWSALLTANFSEKEKDDLMHLIGRLSDNAIIAVEGGESE"
     gene            6983..7864
                     /locus_tag="U0308_000759"
     CDS             6983..7864
                     /locus_tag="U0308_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PucR family transcriptional regulator"
                     /protein_id="HEM2315748.1"
                     /translation="MHIKILKNRYPNIVVSKNPIKSSSDTISFFEEPYYFTIPKSNLS
                     EEEAMLLHTLFPEPLPTFPKESTQFWFDLLFGNKELAMTNEKETYRITQFHIKTTTTK
                     NMLQEWQKALLSFFSPEAELIMFSTNYGVIIEKSTGSLLGEEELIAVAGTLENDFYIQ
                     STFFMGLFHPLNDRLRGLFAEERAIFNHNNREVVQTVASESLKVIALRMKESLITNEL
                     NDLFHQDDTWIPLIHTLFKNQGNISLTAKELFMHRNTIQYRLDKFYEQTNLSLRKMDG
                     LLLAYLSTLQTNNSNHE"
     gene            7949..8404
                     /locus_tag="U0308_000760"
     CDS             7949..8404
                     /locus_tag="U0308_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003768635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2315749.1"
                     /translation="MTKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLI
                     PPIHRNESGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELL
                     KKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERSNS"
     gene            8404..8808
                     /locus_tag="U0308_000761"
     CDS             8404..8808
                     /locus_tag="U0308_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEM2315750.1"
                     /translation="MTTLENSVIFDKGELITNDYFTGNAYLKMLVPEDTVYNCPIGNV
                     TFEPGARNNWHKHDGGQILLVTGGTGYYQEEGKPAQLLREGDVVTIPKDVKHWHGATK
                     DSWFVHLAISTNVELGGTTWLEPVSNEHYNNL"
     gene            complement(8851..9462)
                     /locus_tag="U0308_000762"
     CDS             complement(8851..9462)
                     /locus_tag="U0308_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM2315751.1"
                     /translation="MYKAIIFDVDGTILDTERAVLHSLQAVLAEEGLSYELDELRFVL
                     GITGAAAVEQLNILDPEKVLDKWIEREATFIEEVEVFEGIHKVLHAIPESGVVTSKNA
                     LEMEKGFYPFNIQDHFQAIVCASDTENHKPHPDPLLKGLEILGREPHEVLYVGDSSYD
                     MKCAHAAGAHFGLALWGAKTTDGFEKAELVFEKPEDILAYVSK"
     gene            complement(9476..9844)
                     /locus_tag="U0308_000763"
     CDS             complement(9476..9844)
                     /locus_tag="U0308_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpiR family transcriptional regulator"
                     /protein_id="HEM2315752.1"
                     /translation="MKLDGVCKINSALGMEYQFGEFYIDRDYLVFDQDFSLGMKKRQT
                     FPVAKLGHIALVREEEEIMLTFSCDNIEFEINGNSHDNLREFRDLLQNKGTNSAEIQK
                     AESKKKARYTTHHYHNFAKS"
     gene            complement(9927..10679)
                     /locus_tag="U0308_000764"
     CDS             complement(9927..10679)
                     /locus_tag="U0308_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2315753.1"
                     /translation="MSATSLYRLFAPQIEFLSPAEKQVFFYIDNHISTIEKMSLTSLA
                     ESTNVSTTTVIRMCHKLKLSGFSELKFLLHSDKTETKPLSKDYSSTFLEKIRLGIEQL
                     PKKEIEQVATRIAYAPKIYIACLGMTKTLGEYFSKSLVTSKKNVVFTYDSFIIDILPQ
                     IVERDDLIIIISESGGTENTLSLAEHLKYNLSNVIAIVNNPNAQISQYVETIIYASSE
                     EFDEDSFKHHHAPLLIVIDLILNIFEQQKKLI"
     gene            10845..12803
                     /locus_tag="U0308_000765"
     CDS             10845..12803
                     /locus_tag="U0308_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2315754.1"
                     /translation="MKLSDITSEPLIFLDKDWRTKEEVFDGLIDALHNQGVLSDKNEF
                     KKAVLEREKISETGLEKGFAIPHGKSKAVKKAAFAFARINQPINSWGSIDPTNEVKYI
                     FLLAIPENEAGSTHLELLAALSKRLLDPAFIESISTAPTVNEFITVLDSEQQEDEKVD
                     YTRKIVAITACAAGIAHTYMAAEALELAGKELGIEVIVEKQGANGIEDRITPEILKGA
                     EAVIFATDITAKDKERFAGMPFIQRRVAEPLRSGKEMIETVLSKPDGYVKADTDGSEQ
                     QFDNNKSSVFSQIYRGILTGISYMLPVIVAGGLMIGIGQLGATAFGLEKVIGNPEYAT
                     NSNQLIVIFHYLGLYGNMIMKFMYPVFGAFLAYSIADRPGLAPGFIGGAFAAGLHYTF
                     WGIDGGIPSGFFGVLILGIIAGFVAKFLNEKIKLHKNLQAMKPMFLIPGITVLVLFFV
                     NYYVVDPVFGGLNAWLQELIIQNQDASAVLLSTIIACLTAFDLGGPVNKAAGAIAIGL
                     AADGIFPLTARVLAIVIPPIGLGLATVLDKYVVKRRVFDENLRVAGTTSIFLGFIAIG
                     EGAIPFMLQNPLITIPINMIGASLGAVTAVLLGAVQWLPLPAIWGWPLVENFWAYAIG
                     LIVGIAFITFANIFVRYGLITRKENKIK"
     gene            12864..15512
                     /locus_tag="U0308_000766"
     CDS             12864..15512
                     /locus_tag="U0308_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HEM2315755.1"
                     /translation="MKKNKIVHVVAHSHWDHEWYFTMEDSNILLIENLDYLLNVLETK
                     DSFASYSFDGQMSVIERYLDIRPENKARVEKLIQDRRLFVGPWYTQTDSLLVKTEAVI
                     RNLLYGYKMGEEFGHSMSIGYSPDIFGQHAYLPAIYKSFNMEHSIFQRGVYNDQVQDD
                     LNFHWTSPDNKSIPTNNIFFGYGPGKFLSSEKSYVETRLLPILDRLAEMNTHTDVLLL
                     PAGGDQVLVRENFPEIVAELNEMDLGYTFILSDYEAFMNDAWTSTFPNEITGELLACQ
                     KSRIHHTCRSERYDIKRLNYLVENRLVNILEPLATMANKFGIKYPKPWLDIIWKKLFD
                     SHAHNGIGASNSDDANHDIVVRLTSALRMTDGLINLLKKQITKAVSQEMGDENIALLF
                     NTNPVAEERTAKLTLFTPEKSFQLFSGDAEVTFSVVHQEKLDGGRKVIVTAKGEKEVA
                     VPDYYRTEIYLKSGLIPALGYKTLQVKAVTTEMDQLISISKQTIENEKIIVQFENGKI
                     NLLNKEQQSIINDLIRFENVADAGDSFDFSPLEGDQAIYIETSELLTVEKNHLYSKMM
                     LKHTALVPKDLEARAQKTSTETFEILTEIELFDGEEFVRVRHTIDNKVKDHRIRALIK
                     TNVAEPKYSYADQGYSLMKRSVTNPYLANWREDKFVEAPVPIFPVENIVAVSEEDATL
                     ALLVGGIKEYEILPKTAEIALTLFRSNGLLGKDDLMWRPGRASGINNKVVPTPDGQML
                     EEMIFEYAVYVQPEKLNEQTLYAQSNIFEGHTETYHLQNLNTFEERLERFEVDYPIDR
                     LPAQNSIFELDNPNVFMSTCKKSWDGTGTIIRLFNPSDKEETVRWTTNASSFEVSLAE
                     EKIAELKENTICIPKKGFATILLEGE"
     gene            15514..17196
                     /locus_tag="U0308_000767"
     CDS             15514..17196
                     /locus_tag="U0308_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphorylase"
                     /protein_id="HEM2315756.1"
                     /translation="MQTELVNQIEVKLRKIYQAAYQPAYLEKMLACAENYSNNARGSI
                     DTISEKNVYLIAYGDSIFEKNKHPLQTLNEFLQEYAQDVITDVHLLPIFPSTSDDGFS
                     VTDYKQIDEQLGDWDDVQKMSENFRVMLDFVANHMSKSSDWFKRFSDNEAPYNQFFIE
                     KNSQFDYKNVTRPRTSPLFHKYENGKELWTTFSEDQLDLNVRNIDCLVALTDVLLFYA
                     SKQATSIRLDAIGFLWKTSGTTCMHLPETHEIITLWRLLIDELYPNLQIITETNVPHE
                     ENISYFGDGENEANMVYQFPLPPLVLHTFTCHDTTKLSKWAKSISQVSSTATYFNFLA
                     SHDGIGMRPATGILSDEEINSLVQKAVQNGGQVSYKDNADGTQSVYELNINYGEALQN
                     LGEDTTEELVTKKIIAAHSILLTLQGIPAIYYHSLLGSKNDLVGYEESGINRRINREK
                     LEKNQLVHELETDTYRQTIFTSLKKLVPIRRNHTAFSPFATQEILDLGPDVFAIKRES
                     EEECIYGIINVTSHNIRKTLAFSGTNLLTNQPVTSELELTAYEVVWIKKAVQ"
     gene            17193..18326
                     /locus_tag="U0308_000768"
     CDS             17193..18326
                     /locus_tag="U0308_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEM2315757.1"
                     /translation="MKIVIAPDSFKESATAVEVANAIKKGWTKARPADQISLAPVSDG
                     GEGFLTVLSESSEVELFQAEVTNLNGHKITASYGILASQETAIIESANTIGLDLIPAV
                     DRNPAYASSKGVGELILAALNHNVKKIIIGLGGSGTNDGGAGLIQALGVALLDKNKQP
                     IPPGGIHLQELAYIDASNLNPKLKNIQFQIACDVTNPLLGENGATFVFGAQKGATPEM
                     LVQLERAMQNYGAKLDQFSSQKITTKKGAGAAGGIAAGLMTFLNTDVLSGSALVMELS
                     NMKDKMKDADIVIVGEGRMDKQSMMGKIPVQIAQEAKKQGCFVLAIVGSLALENNIAQ
                     QHGIDAFFPNIPEITDLPTLFENTTKNLERTAENIAKLTLIGK"
     gene            complement(18331..19287)
                     /locus_tag="U0308_000769"
     CDS             complement(18331..19287)
                     /locus_tag="U0308_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2315758.1"
                     /translation="MPNIKEIAKLARVSVTTVSRVLNNHPYVVEEKRARVQAVIDELD
                     YSPNRSAMDLARGKTNTVGVIIPYNDHPWFDKIVNGILEVAFKNRYSVTLFPTGYDPK
                     EEEKYLMRLKTKQVDGLIITSRANNWDVILPYLAYGPIIACEYVESKEVSCSYIDRVK
                     AYRAGFQFLEDEGYKKVAFTAGRASRESTSTYGKINAYEQVFGSVGDNRFLSECYTLE
                     DGLKAGEHFFAEGKDWPDAIYANGDEVAAGVMYHVKKLGLRVPEDVAILGQENLPIGK
                     VLEITTLDHNLKKLGENAFTIFEQGKLQRIKVEHELIRRKTV"
     gene            complement(19355..20689)
                     /locus_tag="U0308_000770"
     CDS             complement(19355..20689)
                     /locus_tag="U0308_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEM2315759.1"
                     /translation="MNPDPESQQIILQLILIVVLTMLNAFFASAEMALVSLNKNRVKS
                     QAETGDKKAVMLAKLVDDPSKFLATIQVGITLAGFFSSASAATSIATRLESVFGGSSF
                     AKELSIIVVTIVLSYITLVFGELYPKRLALQKSEKIARVSVRPIMAVGVVLRPFVKFL
                     SFSTDILVKLTRMEKNTDNEKMTREEMQLLIETGRRDGVIEVEELQMLRGVFEMDNKY
                     AREVMVPRTDAFMIDAETESEELCDALLSENFSRVPVFTGDQDSVLGILHMKDFFAEA
                     RKSGFENIDVKALVKDAYFAQETMFIDDLLKNMQRTRNQMAILMDEYGGVAGIVTVED
                     LLEEIVGEIDDENDVFSDEVKKIDETTFIVEGRMPLDDFNEMFHVELPSRGVDTVAGF
                     VLTLTGTIPEEDDKVVVEYGTLRFTVEEMNDARLVSVRVEKDIQTSELEQMA"
     gene            complement(20807..21496)
                     /locus_tag="U0308_000771"
     CDS             complement(20807..21496)
                     /locus_tag="U0308_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HEM2315760.1"
                     /translation="MNKLNEALKKAEHIVFLTGAGVSVPSGIPDYRSKNGLYAGMSSP
                     EYMLSHTCLVREPEKFYQFVTENMYYPDAEPNAIHTKMAEIEAEKDVTIITQNIDGLH
                     EKAGSKKVVNFHGSLYHCYCQKCGMSVTAEEYLKSDIHSGCGGVIRPDVVLYEEAIPE
                     SAIDQSLAAIRQADLIVIVGTSFRVSPFCNLTDYRNKKARIFAVNKEQISLPYPFEMM
                     ESDAVKVFAEI"
     gene            complement(21489..21779)
                     /locus_tag="U0308_000772"
     CDS             complement(21489..21779)
                     /locus_tag="U0308_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mitomycin resistance protein mcrB"
                     /protein_id="HEM2315761.1"
                     /translation="MPTELIKLPGIGKKMVLMLNEIGVEEVADLKGKNPLELYEDTCD
                     KRGERMDPCVLYTYRCAVYVAETDEAEQDVDLRKWWNWKDKQHINERNLKNE"
     gene            complement(21769..22977)
                     /gene="lde"
                     /locus_tag="U0308_000773"
     CDS             complement(21769..22977)
                     /gene="lde"
                     /locus_tag="U0308_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter Lde"
                     /protein_id="HEM2315762.1"
                     /translation="MENWKKNLYVVWVGCFLTGTGLNLIMPFLPLYIEELGVHNPDQV
                     SMWSGIALSSTFLVSAIMSPIWGKLADQKGRRIMLLRAALGMAIAMILMGLVSNVYQF
                     VGLRLLMGIFSGYISTANALIATQVPRHRSGWALGALSTAAVSGVLIGPLIGGALSDT
                     FGVRPVFYITGALLLGSFFLTLFFVKEKFTPVEKKEMRSGKEVFLSLKNPGLIISLFI
                     TTMMIQIASNSVNPILTLYVRDLAGNAQNIAFISGMIASVPGVAALIAAPRLGRWGDR
                     IGSERILLGALIGSMLLQIPMAFAQNPLQLGILRFLLGLTDGALLPAVQSLLTKNTPR
                     EVSGRIFGYNQSFQYIGNVIGPLVGSSVAAHFGYGDVFLVVAGFIFINVLISFYFNRK
                     MHGEKGNHAN"
     gene            complement(23094..23441)
                     /locus_tag="U0308_000774"
     CDS             complement(23094..23441)
                     /locus_tag="U0308_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315763.1"
                     /translation="MNQTFIVKKEHVSQYPNPLFVNKNESIWVFEEDTEYPGWIFCKV
                     KSTGKEGWVPKQIIQLSNDGKSGTVSEDYSARELNVKPGDKLESNRELNGWVWCVTEE
                     NEAGWVPRGNLEA"
     gene            complement(23460..24104)
                     /gene="fsa"
                     /locus_tag="U0308_000775"
     CDS             complement(23460..24104)
                     /gene="fsa"
                     /locus_tag="U0308_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HEM2315764.1"
                     /translation="MRFFIDTANVEEIKKANRMGFIAGVTTNPSLVAKEGRDFNEVIQ
                     EITSIVDGPISGEVVSLEADEMIAEGRVIAKIHPNMVVKIPMTGEGLAAVKVLTEEGI
                     KTNVTLVFSATQALLAARAGATYVSPFLGRLDDIGDDGLVLIRDIADIFEIHGIPTEI
                     ISASVRHPIHVIECAKAGADIATVPFKVFEQMLKHPLTDSGIDKFLADWEAAKK"
     gene            complement(24246..24935)
                     /locus_tag="U0308_000776"
     CDS             complement(24246..24935)
                     /locus_tag="U0308_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2315765.1"
                     /translation="MLFLKELESNLTVSKLMELCFEHPSYKDYCSVISTKKGEVLESL
                     SPAGTKVYFVLSGIYGMIVEEDAEMEEESYKESIVRFLQKGDSFGLYHLFYDEWSPHV
                     SMQSLGHGEVMEVDSNFLFSIFDKKDENNFFMIKVMAEELREAHTFAKLSFLKKEERI
                     RKAILKCAQTLGTFSDNGILLPREITQEVLARYTNTSREYVAHTVMHLIKEDIIRNRP
                     KPLLVMDKTRL"
     gene            25265..26992
                     /locus_tag="U0308_000777"
     CDS             25265..26992
                     /locus_tag="U0308_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2315766.1"
                     /translation="MDQKKYSWRKFFQLLISAKPANWIIFCALFASVITTVAGLVVPL
                     FTKNLIDGFSIASLDVKMIALIVLAFVLQAITNGFSIFLLNYMGQKVVATIRERLWKK
                     IVHLPVSYFDNTKTGEMVSRMVNDTVVVKELIADHFPQFVTGIISVVGAIIILFFMDW
                     KMTLIILVAVPITALVVAPLGQKMFKISKGLQNETADFTGSISQTLSEARLVKASNAE
                     TLETEAGHQGINRLFGFGIREAKVVAVLGPLIFFVVMGVIVGIIGYGGIRVSAGTMTT
                     GTLIAFLLYLFQIIVPVTSFATFFAQLQKAKGATERIADILNETEEDFDAGKKVDVSG
                     KTIRASDISFSYNEGEPILKHVSFDTKPGEVIAFAGPSGGGKSTLFAILERFYQPKTG
                     EILVGDIPLSEISINSWRTQIGYVSQESAMLSGTIRDNLCYGLDREITEDELWNVAKL
                     AYADGFISELPDKMATEVGERGVKLSGGQRQRIAIARAFLRNPNILMLDEATASLDSQ
                     SEQIVQQALANLMEGRTTFVIAHRLSTIVNADQILFIEHGEITGRGTHSELVASHPLY
                     ASFAEQQLK"
     gene            complement(27046..27297)
                     /locus_tag="U0308_000778"
     CDS             complement(27046..27297)
                     /locus_tag="U0308_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HEM2315767.1"
                     /translation="MANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWEN
                     DSSVCLSELYALEGAVQGIRWHGLDEAKKIELKKFHQSL"
     gene            complement(27317..28600)
                     /gene="serS"
                     /locus_tag="U0308_000779"
     CDS             complement(27317..28600)
                     /gene="serS"
                     /locus_tag="U0308_000779"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEM2315768.1"
                     /translation="MLDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVE
                     TEALKSQRNEVSQEIAKLKREKQDADAKIEEMRVVGDRIKTLDIELREIDEKLDMILM
                     SIPNIPHESTPVGESEDDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTG
                     SRFVFYKKLGARLERALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDA
                     FLIEAEDYFLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLI
                     RQHQFNKVELVQFVKPEDSYAALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKK
                     YDLEVWIPSYNSYREISSCSNFESFQARRANIRFRREPGSKPEYVHTLNGSGLALGRT
                     VAAILENYQDADGSVRIPKVLQGYMGGIEKIELPK"
     misc_binding    complement(28659..28881)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            complement(28934..29353)
                     /locus_tag="U0308_000780"
     CDS             complement(28934..29353)
                     /locus_tag="U0308_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEM2315769.1"
                     /translation="MKNELEDKILAILEQHQVGVLTSVQGDYPHARYMTFLHDGLTLY
                     TPSGKELPKTEEVRRNPHVSVLIGYESPGSAFLEINGLASLEEDESIKERIWENISKE
                     WFQGEDSPSFVVIKIVPEQIRILNSDDDGPDTLDLIG"
     gene            29483..30055
                     /locus_tag="U0308_000781"
     CDS             29483..30055
                     /locus_tag="U0308_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEM2315770.1"
                     /translation="MILIIDHNDSFTYNLYQYFLELQEEVQVVSATNFSLEIFQQLVP
                     EMVVLSPGPGSPEDFPVSLALLGKIQVPILGICLGHQMIGHFFGAKVVPAKVPVHGKT
                     SIISHTGEGLFAELAPKFQVTRYHSLVIDPATVPANLKVTALTEDGVIMGLAHVSKPI
                     HSVQFHPEAILSENGHAILENFIRLGRNVK"
     gene            30052..31758
                     /gene="pabB"
                     /locus_tag="U0308_000782"
     CDS             30052..31758
                     /gene="pabB"
                     /locus_tag="U0308_000782"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HEM2315771.1"
                     /translation="MSLLRFDFEGDTKIFENPLYELVTHDLAEVLPIMKAAEEAQKSG
                     KYVAGFVSYEAAPAFRSNLKTKKPSGNMPLVWFGVYDNFNDTATETPDSSPLSFKMNT
                     SFPEYAEKIEQIKAEIAAGNTYQINYTVRLQSDVPNSFSSQATYETLQQIGKANYTAL
                     LSTSDFEIISASPELFFKWKENLLTTRPMKGTIRRGITEQADLEAHDWLKNDPKNRAE
                     NVMIVDLLRNDLGMIAVPGSVKVPKLMTLEPYPTVWQMTSTVTAETPPETDLTAVFKA
                     LFPCGSITGAPKARTMEIISELEDSPRGVYCGAIGFLEPNGNAIFNVPIRTIAIADNK
                     ATYGVGGGIVWDSEAASEFSEIHAKSAILEKTTKFSLIECLRIENGELFRTEYHLKRL
                     QTSADFFGIPFNREETEKLWTKTAQKNTTDTYKMRFLLHPDGAHDLELTRIDTKNKRI
                     TAQLADKPVPSNDLFLYHKTTHRKVYENLKNTQTEETLLWNERGELTEFINGNIVLGI
                     NGCFFTPPVTSGLLSGTMRAELLAKNKISEKTLAKKDLLEADYVWLINSVRGFIEVEI
                     KQ"
     gene            31920..33641
                     /locus_tag="U0308_000783"
     CDS             31920..33641
                     /locus_tag="U0308_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2315772.1"
                     /translation="MKVLFHHLKKYKLQATLSTLFVVVMVISQLWQPKLLQQVLDAIM
                     KDDMDEISSIGALLIGIAAVGLIAGILNTILSAKVAQGVGADIRESSFRKIQTFSFSN
                     IEKLSTGNLVVRQTNDITQVQNLVMLSLQSLTRIPIMFIGAFILAMFTLPELWWVIIV
                     LVVLVVLIVVFTFGSMGKHFAIIQKLIDRVNSIAKENLAGMRVVKSFVQEDNEISRFT
                     TVSDKLTRHTIIVGTLFSVMIPAFMLVSNLAIVVSIFFVGDMAADNPEVIGAIASFMN
                     YLMQIMMAIIIGGMLMMMASRALISLKRITEVLETEPDITYNESAPEQDLEGTVEFRN
                     VSFKYDGDDTPALEDISFKASVGEMVGIVGATGSGKSTLAQLIPRLYDPTEGEVIIGG
                     TNLKDINKKTLRSTVSFVLQRAILFSGTIADNLRHGKKDATAEEMEHASKIAQAKEFI
                     DKQAKLYEAPVSERGNNFSGGQKQRLSITRGVIGSPKVLILDDSTSALDAKSEKLVKE
                     ALNKELDDTTTFIIAQKISSVIQADKILVLDKGKLVGVGSHKELLKENETYREIYDTQ
                     KGKEVTA"
     gene            33641..35413
                     /locus_tag="U0308_000784"
     CDS             33641..35413
                     /locus_tag="U0308_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2315773.1"
                     /translation="MKEFKQISRFFWHYLRGYKPQLFVILIAVVFATYLQVKAPQYIG
                     NAVQELGDYVVNLMQTGVDDKSDFIHIIWMLILCYVLLAAATFIQSIIMTGVAGKSTN
                     RMRIGLFRKMEKLSIRFFDSRNDGEMLSRFTSDLDNISNTLNQALIQVLSNVALMIGV
                     IIMMFQQNVELAFVTLISAPFAIIIATVIIRKARKFVDIQQDELGVLNGYIDEKISGQ
                     KIIITNGLEEETIDGFVKQNNIVKNATYKGQVYSGLLFPMMQGISLLNTAIVIFFGGW
                     LALNGDLERTAALGLIVMFVQYSQQFYMPLTQISSQYSLLQLAITGARRVSEVFAEEE
                     EVERENLQTIDGINKGVKLDHVDFAYDPAKPVLKDVSIDVSKGKMVALVGPTGSGKTT
                     VMNLLNRFYNVDGGAILFDDIDIRDIRLDSLRKQVGIVLQDSVLFTGTIRDNIVFGKP
                     EASDDEVINAAKQANIHDFIMNLEKGYETEISDENNIFSVGQKQLMSIARTIITNPSL
                     LILDEATSNVDTVTESRIQKAMDNVISGRTSFVIAHRLKTILDADHIVVLHQGEVIEQ
                     GNHDELMKAEGFYSELYHNQFVIE"
BASE COUNT        10847 a         7548 c         6569 g        10644 t
ORIGIN      
        1 tcctattttg cgacaaattt atttagtact ttcgatgtta ttttgtttta gttagattgt
       61 gatatttttc gcaattatta tctggctgta aatgttggta aggcttattg ctttttattt
      121 cacaatgaaa gatttaaaag tatgatttct tacaataagc attaagacct attcaattta
      181 ttccgttttc gtagatcttg gaaaaaactt cttaacattt cgctgctttc tttttccatt
      241 aatcctgctt ctacttcaca cgtatgatta aatcggtcat cttggagtaa attcattaac
      301 gatccggctg ttcccgcttt tggatctttg gctccgtaat aaactttttc aatccgcgaa
      361 agtaaaatgg cgccgctaca catcggacat ggttctagcg taacgtatag ttctgcaccg
      421 ctaagtcgcc atgaattttg atgtttacac gcatcttgaa tcgcaagcaa ctccgcatgg
      481 gtcactgcat tttggctcgt ttcacgcaaa ttatgcgccc gcccaataat ttctccatct
      541 aaaacaacga ctgcaccaat tggaacttct ccaatatctc gtgctttctc ggcttcttca
      601 agcgcttgtt gcataaagaa agctcgttcc atctatgcac ctcatttcta aaaagtcact
      661 cattgttatt ttagcatagc ttggattgga tgtaggaata atctgctcaa actttcacag
      721 gaacacttta gttgctttcg cggaacattt atattaccat atattaatac taggtcctaa
      781 aacaaaatta tcaaaatata caatctactt ataaaggaga gtcattatga attcagaaaa
      841 tttaatcgct ccagaacttt ataatattac cgacgagatt gctaaattca gttctgaaaa
      901 aactgcttta atttggaaaa atgagcataa cgaaacaaaa aattggagtt accgccacct
      961 gcttgaacaa gcgaataaat ttgccaatgt tgtcaaagac gcaggcataa aaaaaggtga
     1021 ccacgttatc gtcatgacac ctagattact cgaaacgtac gcaatttaca tgggcttatg
     1081 gaaagctggt gccattatca tcccggcatc cgagctactt aaagcgcacg atttagaata
     1141 ccgcatccac catgcaaacg taaaagcaat cgtttcttac aatggaatga ctgctgaatt
     1201 tgataaaatt gaaagcatcc cttctgtttc gaaaaaaatt attgttgggg agaaattatc
     1261 cggctgggat cactacgaaa cattaatgga agccgcttca accgaatttg aacgcgtgga
     1321 aacttcgcgc gatgatgctt gtctgcttgc attcacgagt ggaacaacag gtaatcctaa
     1381 aggcgttgta catattcacg gctggggtta cgcgcatatt cgtatcgctg ctgatcattg
     1441 gctcgatatt cacgaagacg atatcgtttg ggctacagcc ggacctggtt ggcaaaaatg
     1501 ggtttggtct cctttccttt ctgtactcgg aaaaggtgcc actggcttca tttacaacgg
     1561 tcgtttcatt cctgaaaaac aacttcattt actggaagaa gaaaaaatca acgtgctgtg
     1621 ctgtacgcca acagaatatc gcttaatggc taaagtaaat aatttgcgcg aacatgattt
     1681 aagttccctt cgtagcgccg tatcagcagg agaacctcta aaccgcgaag taattcaagt
     1741 tttccaagat aattttgata ttaaagttcg cgacggctac ggtcaaacgg agagtacact
     1801 gttgattggg acactggttg atacgccgat tcgccctggt tcgatgggta aaccgattat
     1861 gccagaatac atggcaatta ttgacgctga aggaaatcca gttggtgtcg gtgaaattgg
     1921 tgatatcgcg atgcgtagag atttcccagc acttttcaaa gagtactata aagaaccaga
     1981 acgtttgcaa aaagcgattc gcggtgatta tttcgtttct ggtgaccgcg ctatccgcga
     2041 tgaagataat tattactggt tccaaggccg gaatgacgat attattatta gctctggtta
     2101 cacgattgga ccgttcgaag tagaggacgc gctcacacat catccagccg taaaagaagt
     2161 cgctgttgtc gcaagtcctg acgaaatccg cggtacggtc gtaaaagcat ttatcgtctt
     2221 aaaggatggt tacgagggca cggaagatct tgtgcatgaa ttacaaacat tcacgaaaga
     2281 acaaaccgct ccgtataagt atccgcgccg gattgagttt gttgaggcat taccgaaaac
     2341 tgattctggt aaaattcgcc gcgttgagtt gcgtgatgcg gagtttgcta gtgtgcatgg
     2401 ataatcaaaa acccagcctt cctaaataga aggttgggtt ttcttttaaa tattcaactc
     2461 actcgccgct tcctcgtcca gcaccactgt aaaattaggg tgtaactgga aaatcgagct
     2521 tggaatgtct tctgtcactg ggccttgtag ggcttttttg ataatcgctg cttttttctt
     2581 gccatttgcg aataggatga cttcttttgc gtgcatgacg ctttttggtc ccattgttac
     2641 gtagtattcg gggacttttt ccacgtcgcc gccaacttct ccgagcaaaa tatcgaacat
     2701 atctgggcgt gattgaacgg aaacaagtcg ggtttcatcg ccgaatttgg ttacgccagg
     2761 taagttcccg cagaagtgac catcttcacc aatcccgatt aaaatcgcgt ccaaaccgcc
     2821 aactgctttc aaatgcgctt catggtctgt atagtttttc gtatctagca tgtgaatttg
     2881 ttcttctgga attcccgccg gatcaaagta catcgctttt aaattggcaa tggttacgcc
     2941 gtatttttcg tccccaattg gaatttcgtc aaaattataa tagcttacat ttgtcagtgg
     3001 tgccttttct ttcatttctt ctacaatcag ttcgtacatt cgcttcggtg tggagcctgc
     3061 tgtgatggct aaatgaacca acttgtcttg atacattttc cctaaaagca gttgcatcgt
     3121 tgttttactc atattttcgt aatctttttc cacaataatt ttcatttttt tcacctctcg
     3181 ctttgaatta cctttatgat aaagtgtata gtaactatag agtcaagacg aaagggtgat
     3241 aaatgtggaa ccgctttttt ccattgggga aatggcaaag aaaagccaac tctccatcca
     3301 acgactgcgc tattatgata aaattgggct tttggtcccg gcttttaccg atccaacttc
     3361 tggatatcgc tactacaaaa cggctcaaga agaacaactc aacctcattc aagcgttgca
     3421 gtatatgggg ttttccttgc aagaactgaa acaatacctc gacaaaaaca catcggaaag
     3481 cttgcccgat ttgcttataa aataccaaca aaaattaatg gatgaagaag ctcgcattgc
     3541 ccgtaaaaaa tggcttattg accgttatca aggtttgtta aaacgggaaa ctgacacgac
     3601 aaaacctcta actgcggtcc gacttttgct tacagagcca cttctaacgc ctgttcatgc
     3661 ggatatttta aacgacccgg cttttcatca agaagtgcag aaaaccgtga gccgccttgg
     3721 tctttcgaaa agctatcagc agtttcctgg ttattgtatt ttagacgggc agacttatct
     3781 tttcattgag ttggatcatt ctattggcgc gcctggtgaa cggcgtttgt tatcaagcga
     3841 gcggcaagct tttgtcacgc cgcaaaactg ggagacacct ccagaaaatg aaaattacct
     3901 tttacaagaa acggtggctt ggattaatca agagctggtt cgtggttatt cctatgaaac
     3961 aaaattaact tttgaataga tattttagaa agattggtta taatagaaag aaataacgtg
     4021 gaggtgggcg ccgtggaaat caagcaaatc aaagcaaaag acacgcaaga tattaggcac
     4081 cgggttcttc gcccagaaca gcctgaagaa aacgcaattt accctaatga tgatatggag
     4141 ggtacttttc atttaggcgc ttttgaaaaa gatgttttac ttgggattgc cagtttttat
     4201 ccagaaaaat cgactgttat tatgaatcct gcccagtacc gaattcgcgg tgtggcgaca
     4261 gaacgccgga tgcgcttgaa aggcctcggc acagctttac ttgcagacgg tgaagcgaaa
     4321 atttggaagc gcggcgcaga tattatttgg tgcaatgcgc ggattgtcgc tgttggtttt
     4381 tatgaaaaac atggctaccg caaagtcggc aaatcgtttg tcattcctgg catcggcgaa
     4441 cattacttaa tgaaaaaagt gaatccaaat aaaaaagtgg accaagataa ctaatatctg
     4501 gtccacttgt tttttataat ttagaataag gttgcgtatg aatcatccaa gaaattccgt
     4561 actcatcgac gaattgtccc atttttccgc cccaaaattg ctcttcgaaa ggtaacgtta
     4621 ctgttactct ttctgagctg ctcacttttt caaagaaagc atcggcgtcg gctactgccg
     4681 ctgggtcttc actgttagaa tcaagcataa tcgaaatttg attggatggt tttacttctt
     4741 tgccaaatga atctgaacaa aataagtttg cgccaaggac ggtaaagcca ccgtgaacag
     4801 ttgtgttctc taggttttct tttgctaagc caaacatttc gctttgttcc tcacttactg
     4861 gaagccttga aatattcgtt gctccgaaca cttcttcata atatcctaaa gcctcttttg
     4921 cattttcaaa agccaaatac gggtacattt ttgccataaa aatcgctcct ttatttttga
     4981 gacactagtt agaaaatacc caattcgttt taccttaaac tatctcggga tttttaaaaa
     5041 ttcggcgcca tgttttgctc ataatcacta gacagacggt gaacgcgcct aaatctgcta
     5101 atgggaaggc gtaccaaata ccatctaaac cgaagaactg cggcaaaata agtaaaagtg
     5161 gtactaaaca gatgatttgg cgcattaggg aaatgatgaa tgaaattctt gctcgaccaa
     5221 gtgcttgata tagcccaccg cagacaattt ggaaaccaat tgttggcgca gctagtagca
     5281 taaatctaac agcgtttgtt ccttgtgcaa tcagttctgg gtcgttagag aaaattcgta
     5341 cgagcattcc tgggaaaatt tctaccaatc cccaagcaat tagtgacatg acagttgcag
     5401 ctatcattga tactttaaca gctttcatta cgcgttcgaa ttgtctggaa ccgtagttga
     5461 agccgacgat tggttgcatc ccttgtgtaa caccattgat tggcataatg acgaacgacg
     5521 caatccggtt cgcaattccg tatacagcga tcgccatcgt tccaccataa atattaagca
     5581 tccagtttac cgcaaccgtt acgatactac ctgcggacat cataataaat gacgggaacc
     5641 cgattgccat aatccggcga atcagcggga aatccattcg gaatgagaac ccttttaaag
     5701 ataaagtact ttttcctgat aaaaaataaa tcaagagcca aatcgcgcca acagcctgcg
     5761 caataacagt tgcaagggca gaaccacgaa cgcccatacc aaagcccata atgaaaattg
     5821 ggtttaaaat catatttaaa atagcggaaa taatcatggt taacatcgct gttttcgcat
     5881 taccttctga gcgaacgata ttattcatcg ccatagcgaa ggtttggaac actgcgccta
     5941 acaaaataag cgataagaaa tcactggcaa tatcatgaat atctgccggt gctccgaaaa
     6001 gcgtaataag cggatctaaa aaaataaagg ttacaattgc aataaaaatg ctggaaataa
     6061 gtactaacca aataacttga tggaatactt tatccgcttg tttttgttcc ccagcaccga
     6121 gcgagcggga aataatcgac gcgccaccaa taccaaacat agctgccatt gccattagta
     6181 tcatttgaac tgggaatgca attgaaagtg ctgcaacccc tgatggccca acgccatatg
     6241 acacgaaaat cgtatcaaca atattataca tccccataac aaacatgccg ataaatgccg
     6301 gtatcgacaa tctcgccatg agtgaaggaa tgctatcttc acctaatcgt ttactctgtt
     6361 ctttcattca gattctcctc cttcgactgc tataatcgca ttatctgaaa gtcgtcctat
     6421 caaatgcatt aagtcatctt tttccttttc actaaaattc gctgttaaaa gtgcggacca
     6481 ttcggctgtc acttcttcaa ttaaatcgcg catctgaaaa ccagtttccg tcacaaaaat
     6541 ccgctgaata cgtctatctt tcgcatcaat ttcgcggcga atcatcccca gttcttccaa
     6601 acgcttaata tgccttgtca cacttgcttt atcaaccata aaccttttag ccatagattc
     6661 ttgggaaata ccatcttctt tataaagcgt ccataaataa cgtaattgac ctatattaag
     6721 accagtttct agtaattttt tatttttaaa agtgctttct gaacgatgaa taattgcgat
     6781 ggctttcgct aagctttcct gtctatctgc catttatccg actcctcata aaaaaatccg
     6841 ccacataatt agttgcggcg tcaaccatta tagtatagca ggattttagt tgactgcgca
     6901 acctttttat ttcccgggca ataatttgac ttcctatctt tcttttgtaa aaataaagaa
     6961 tagagaaggg gtgctatcca ctgtgcatat taaaatatta aaaaatagat atcccaatat
     7021 agtcgtttca aaaaatccaa taaaatccag ttcagatacg atttcttttt tcgaagaacc
     7081 gtattatttt actattccta aaagcaatct ttcagaagaa gaagcgatgt tattacatac
     7141 gctatttcca gaaccattac caacatttcc taaagaatcc acccaatttt ggttcgattt
     7201 attgtttgga aacaaggaat tggcgatgac aaatgagaaa gaaacatatc gcattacgca
     7261 gtttcatatt aagacaacta caactaaaaa catgttacaa gagtggcaaa aggctttgct
     7321 gagttttttc agtccagaag ctgagttaat tatgttttcg actaactatg gcgttattat
     7381 tgaaaaatca acggggtcgc tgcttggcga agaggaacta atcgccgttg ccggtacgct
     7441 tgaaaatgat ttctatatac aatctacatt tttcatgggt cttttccatc cgttaaatga
     7501 tcgattgcgt ggtttatttg cagaagaacg tgccattttc aaccataata atcgtgaggt
     7561 agttcagacc gtggcttccg aaagtttaaa agttatcgcg cttcgaatga aggaaagttt
     7621 aatcacgaat gaactcaacg accttttcca tcaagatgat acttggattc cgctgattca
     7681 cacattattt aaaaaccaag gaaacatcag tctcacggct aaagagcttt ttatgcaccg
     7741 aaataccatt caatatcgct tggataaatt ttatgagcaa acaaacttat cgctccgcaa
     7801 gatggatggg ttgctcttag cttatttatc tacacttcaa acaaataata gcaatcatga
     7861 ataaatgatc atggttgctt tttcgcttga cttaaagtcc acttcaagga atacaatcat
     7921 tatagaaaat cagtaaagga gaatagtcat gaccaaaaat aatattagtt tttatgtagt
     7981 agatgcttcg gaagaattaa ccatgaatat caaagaagct agtgaaaaaa gtggcgtttc
     8041 tgccgataca attcgctact atgaacgcat tggtttaatt ccacccatcc accgtaatga
     8101 aagtggggtt cgtaaatttg gcgcagaaga cctacgatgg attttattta ctcgccaaat
     8161 gcgccgagct ggtttgtcta ttgaagcctt aattgattac ttggcacttt tcagagaagg
     8221 cgaacacacg ctggaagctc gcgccgaatt gctgaaaaag caacgcatag agctgaaaaa
     8281 tcgcattgat gttatgcaag aagcgctcga tcgacttgac ttcaaaatag acaattacga
     8341 tacccacctc attccggctc aagaagaact aaaagatttt aatgttgaaa ggagtaattc
     8401 ataatgacta cacttgaaaa tagcgttatt tttgataaag gtgaactgat tactaatgac
     8461 tactttaccg gtaatgctta tttaaaaatg cttgtccctg aagacactgt ttacaattgt
     8521 ccgattggga acgttacgtt tgaaccggga gctagaaaca actggcataa acatgatggc
     8581 ggacaaatcc tacttgtgac aggcggaact ggctactatc aagaagaagg aaaacctgcc
     8641 cagttgctca gagagggcga cgtggtaaca atccctaaag acgtgaaaca ttggcacggc
     8701 gctacgaaag atagctggtt tgtccactta gccatttcga caaatgtgga attaggcgga
     8761 acgacctggt tagaacctgt ttccaacgag cattacaata atttataaca aaaaacccgc
     8821 tagccttcat tcaaggttgg cgggttttac ttatttactt acataagcta aaatatcttc
     8881 tggtttttcg aagacaagtt ctgctttttc aaagccatct gttgtcttcg cgccccaaag
     8941 tgctaagcca aaatgagctc cggccgcatg ggcacatttc atatcgtacg aagaatcacc
     9001 aacataaagc acttcatgtg gctctcttcc aagaatttct aaccctttca gcagtggatc
     9061 tgggtgaggt ttatggtttt cggtatcact tgcgcaaaca atcgcttgaa aatgatcctg
     9121 aatattaaac ggatagaaac ctttttccat ttctaacgcg tttttagaag tgacaacacc
     9181 gctttctgga atggcatgca gtactttatg aatgccttcg aacacctcta cttcttcaat
     9241 gaaagttgct tctcgttcaa tccatttatc caatactttc tctggatcca gaatgtttaa
     9301 ttgttccacc gcagctgctc cggtaattcc aaggacaaat cgtaattcgt ccagttcata
     9361 acttaatcct tcttcggcta aaaccgcttg aagagaatgc aaaacagctc tctccgtgtc
     9421 tagaattgtt ccatctacgt caaaaattat tgctttatac atataatttc ctccttcaag
     9481 atttagcgaa gttgtgataa tggtgcgttg tatatcttgc ttttttctta ctttccgctt
     9541 tttggatttc tgcgctgttg gtgcctttat tttgaagtaa atctcgaaat tcgcgcaaat
     9601 tatcatggga atttccattt atttcgaatt caatattatc gcagctaaat gttagcatga
     9661 tttcctcttc ttctcgaact agcgcaatat gccctaattt tgcaactgga aacgtttgtc
     9721 tttttttcat acccaaacta aaatcttggt caaaaacaag atagtctcta tcgatgtaaa
     9781 actctccgaa ttgatactcc attccaagtg ctgaattaat cttgcatacc ccatctaatt
     9841 tcatatcatt cgcctccttc attgccttat atattagttt taaatgatga aatgggtttc
     9901 atgtcaagca atttcataaa aatattttaa ataagttttt tttgctgttc aaaaatattt
     9961 agaatcaagt caatcacaat taacagtggg gcgtgatgat gtttaaatga atcttcatca
    10021 aactcctcac tggaagcata aataatcgtc tccacatatt gggaaatctg ggcattggga
    10081 ttattcacaa tcgcaatgac attcgataaa ttatatttta aatgttccgc gagtgaaagg
    10141 gtgttttcgg tgccaccgct ttcagaaata ataataatca aatcatctct ttcaacaatt
    10201 tgtggcaaaa tatcgataat aaatgaatca taggtgaaaa ctacattctt tttcgatgta
    10261 acaagacttt tggaaaaata ttctcctaat gttttcgtca tgcctagaca agcaatatag
    10321 attttaggtg catacgcaat tcttgtcgcg acttgctcaa tttctttctt tggaagttgc
    10381 tcaattccta aacgaatttt ttctaaaaat gtagatgaat agtcttttga aaggggtttt
    10441 gtttctgttt tatccgagtg aagtaaaaat ttcagctcag aaaaaccgga aagctttaat
    10501 ttatgacaca ttctaataac ggttgtggta ctgacattgg ttgactccgc tagagatgtg
    10561 agggacattt tttcaatggt agaaatatgg ttgtcaatat agaagaaaac ttgtttttca
    10621 gcaggactta aaaattcaat ttgaggcgca aacaagcgat aaagtgaagt agctgacata
    10681 ataaatacct ccatggctat ccgaattaat tttagtatac atgaaataaa agcgaatgaa
    10741 caacactgcg tacaattgta cgattttcgt actttttcaa aaaaataata tggtataact
    10801 aaagtaacct agggaaaaga ctgttaataa aggagctgat agcattgaaa ttaagcgata
    10861 ttacatcgga gccactcatc tttttagata aagattggcg cactaaagaa gaagtatttg
    10921 atggattaat tgatgcttta cacaatcaag gagttttgtc agataaaaat gaattcaaaa
    10981 aagctgtctt agaacgcgaa aagatttctg aaactggttt agagaaaggt tttgctattc
    11041 cacatggtaa atctaaagct gttaaaaaag ctgcttttgc atttgctcgt atcaatcaac
    11101 caattaattc ttggggcagc attgatccaa caaatgaagt aaaatatatc tttttattag
    11161 ctattccaga aaacgaagcc ggatcaactc atttagaact tttggcagct ttaagtaagc
    11221 gtttactcga tcctgctttt attgagagca tttctaccgc tccgacagta aacgaattta
    11281 taaccgtgct agattctgaa caacaagaag atgaaaaagt agattataca cgaaaaatcg
    11341 ttgctattac agcatgtgca gcgggtatcg cccatacgta tatggcagcg gaagcccttg
    11401 aactagctgg taaagaactt ggtattgaag ttatcgtcga aaaacaaggt gcgaatggta
    11461 ttgaagaccg cattactcct gaaatcctta aaggcgcaga agcagtcatt ttcgcgacag
    11521 atattaccgc aaaagataaa gaacgtttcg ccggaatgcc ctttatccaa agacgtgtcg
    11581 ctgagccact tcgtagtggt aaagaaatga ttgaaactgt attaagcaaa ccagatggct
    11641 atgtcaaagc tgatacagat ggttcagaac aacaatttga taataataag agcagtgttt
    11701 tctcgcaaat ttatcgtggg attttaactg gtatttctta tatgttacct gttattgtcg
    11761 caggtggttt aatgattggt attggccaac ttggcgcaac tgcctttggt cttgaaaaag
    11821 ttattggtaa tccagagtat gcaacaaact ctaaccagct tattgtaatc ttccattatc
    11881 tcggtttata cggaaatatg attatgaaat tcatgtatcc tgttttcggt gccttccttg
    11941 cttactcaat tgctgaccgt cctggacttg ctcccgggtt tatcggtggt gctttcgcag
    12001 cagggctaca ttacaccttc tggggcatag atggcggtat accatctgga ttcttcggtg
    12061 ttctaatttt aggtatcatt gccggatttg ttgctaaatt cttaaacgaa aaaattaaat
    12121 tacacaaaaa tttacaagct atgaaaccaa tgttcctgat tccagggatt accgttttag
    12181 tcttgttctt cgtcaattac tatgtggtcg acccggtatt cgggggctta aacgcatggt
    12241 tacaagaact aattattcaa aatcaagatg caagtgctgt actactttcg acaattattg
    12301 cttgtttgac tgcatttgac ttaggtggac cagtcaataa agcagctgga gctatcgcaa
    12361 tcggactcgc agcagacgga attttcccgc taactgctcg tgttttagca atcgttatcc
    12421 cgccaatcgg acttgggctt gcgactgtat tagataaata tgttgttaaa cgtcgtgttt
    12481 ttgatgaaaa cttacgtgtt gcaggtacaa cctctatttt cctagggttt attgccatag
    12541 gagagggcgc gataccgttt atgctacaaa atccacttat cactattcca attaatatga
    12601 ttggtgcttc tcttggtgcg gttactgccg ttttacttgg tgcagtacaa tggcttccac
    12661 tcccagcaat ttggggttgg ccgctcgttg aaaatttctg ggcctatgcg attggtttaa
    12721 tcgtaggtat cgcctttatc acattcgcga atatcttcgt acgctacggc ctaatcacac
    12781 gtaaagaaaa taaaatcaaa taaaaaaata ggctgacagg tactctcgtt agtacctgtc
    12841 acttaatttg agaggttttt aaaatgaaaa aaaataaaat tgtacatgtt gtcgcacatt
    12901 cccactggga tcacgaatgg tatttcacca tggaagattc caatatctta ttaattgaga
    12961 atttagacta tcttttaaat gttttagaaa caaaagattc ctttgcaagt tattcctttg
    13021 atggtcaaat gtctgtcatt gagcgttact tagatattcg tccagaaaat aaagcgcgcg
    13081 ttgaaaaact tatccaagat cgtcgtctgt tcgtcggtcc gtggtataca caaaccgata
    13141 gcttgttagt taaaacagaa gctgtgattc gcaacttact ttatggttat aaaatgggcg
    13201 aagaattcgg ccatagcatg agtatcggtt attccccaga tatttttggg caacatgctt
    13261 atctgccagc tatttataaa tcatttaata tggagcatag cattttccag cgtggtgttt
    13321 ataacgatca agtgcaagat gaccttaact tccactggac atctccagac aacaagtcca
    13381 tcccaaccaa caatattttc ttcggttatg gacccggcaa atttttaagc agtgaaaaaa
    13441 gctatgtaga aactcgtctt ctgccaattt tagatcgact tgctgaaatg aacacacata
    13501 cagatgtcct tcttttacca gcaggcggcg accaagtact tgtgcgcgaa aacttcccag
    13561 aaattgtcgc ggaattgaac gagatggact taggttatac cttcattctg tccgattacg
    13621 aagcatttat gaatgatgct tggacttcta ctttcccgaa cgaaatcact ggtgaactgc
    13681 ttgcttgcca aaaatcacga atccaccata catgtcgttc agaacgctac gatattaaac
    13741 gtcttaatta cttagtagaa aatagattag tcaacattct agaaccactt gcaacaatgg
    13801 ccaataaatt cggaatcaaa tatcctaaac cttggttaga tattatttgg aaaaaattat
    13861 ttgatagcca cgctcataac ggtattggtg cttcaaattc agatgacgca aaccatgaca
    13921 tcgtagttcg gctaactagc gcacttcgga tgacagatgg cttaattaac cttttgaaaa
    13981 aacaaattac gaaggccgtt agtcaggaaa tgggcgacga aaatattgcg ctattattca
    14041 atactaaccc agtggcagaa gaaagaactg caaaactaac attattcact cctgaaaaat
    14101 cattccaact gttctcaggt gatgcggaag tgactttcag cgttgtacat caagaaaaat
    14161 tagacggtgg acggaaagta atcgtaactg caaaaggcga aaaagaagtt gctgttcctg
    14221 attattatcg tacagaaatc tacttgaaaa gcggcctaat ccctgcactt ggttacaaaa
    14281 cattgcaagt gaaagccgtt actacagaaa tggaccaatt aatcagcatt tccaaacaaa
    14341 caattgaaaa tgaaaaaatc attgttcaat tcgaaaacgg gaaaatcaat cttttaaata
    14401 aagaacaaca aagcattata aatgacctta ttcgcttcga aaatgtggct gacgctgggg
    14461 attcttttga cttctcacca cttgaaggcg accaagccat ctatatcgaa acaagcgaat
    14521 tactaaccgt tgaaaaaaat catctatata gcaaaatgat gttaaaacat actgctttag
    14581 ttccgaaaga tttagaagcc cgcgcacaaa aaacaagtac agaaacattt gaaattttaa
    14641 cagaaatcga actttttgac ggtgaagaat tcgtccgtgt tcgccatact attgacaata
    14701 aagtaaaaga ccaccgcatt agagcattga ttaaaacaaa tgtagcagaa cctaaatatt
    14761 cttacgcaga ccaaggttat agcctcatga aacgcagcgt cacaaaccct taccttgcaa
    14821 attggcgcga ggacaaattc gtggaagcac ctgtgccgat tttcccagtg gaaaatatcg
    14881 tcgctgtttc tgaagaagac gcaacacttg ccttgttagt tggcggtatc aaagaatatg
    14941 aaatcttacc gaaaactgct gaaatcgcat taactctttt cagaagtaat ggtttgcttg
    15001 gaaaagatga tctcatgtgg cgtccaggtc gtgcttccgg tattaataac aaagtcgttc
    15061 ctacaccaga cggtcaaatg ctcgaagaaa tgatttttga atatgctgtg tacgtacaac
    15121 ctgagaaact aaatgaacaa acgctctacg cgcaatctaa catttttgaa ggtcatacag
    15181 aaacctatca cttacaaaac ctaaatacat ttgaagagcg cctagaacgt tttgaagtag
    15241 attatccaat cgaccgttta ccagctcaaa attctatctt tgaattagat aacccgaacg
    15301 tattcatgag cacttgcaaa aaatcgtggg atggcactgg cacaattatc cgcctattta
    15361 acccatcaga caaagaagaa accgttcgct ggacaaccaa cgcttccagt tttgaagttt
    15421 cactagcgga ggaaaaaatc gcagaactaa aagaaaacac tatctgtatt cctaaaaaag
    15481 gatttgcaac tattttgttg gaaggagaat aatatgcaaa ccgaactggt taatcaaata
    15541 gaagtaaaac taagaaaaat ttatcaagct gcataccaac ccgcatactt ggaaaaaatg
    15601 ctcgcatgcg ccgaaaacta ttctaataat gcgcgtggtt cgattgatac tatttccgaa
    15661 aaaaacgtct atcttattgc ctatggcgac agcattttcg aaaaaaacaa gcatccgtta
    15721 caaacattga atgaattcct acaagaatat gcgcaagatg ttattacaga tgtccacttg
    15781 ctgccgattt tccctagtac gtcagatgat ggcttctctg tcacagacta caagcaaatt
    15841 gacgaacagc ttggcgactg ggatgacgtt caaaaaatgt ctgagaactt ccgagtgatg
    15901 cttgatttcg tagccaatca tatgtcgaaa tcaagtgatt ggtttaagcg attctccgat
    15961 aacgaagcgc cgtacaatca atttttcatc gagaaaaaca gccaatttga ttataaaaac
    16021 gtcacacgtc cgcggacttc tccgctgttc cacaaatacg aaaacggtaa agaactttgg
    16081 actactttta gcgaagatca gttagactta aatgtccgta atatcgattg ccttgtagcc
    16141 ttaacagatg tactgctttt ctatgcatcc aaacaagcga caagcattcg acttgatgcc
    16201 attggatttt tatggaaaac ttctggcact acttgtatgc acctgccaga aacccatgag
    16261 atcatcacgc tttggcgtct gctgattgat gaactatatc caaatctgca aattatcaca
    16321 gaaacaaacg tccctcatga agaaaacatt agttattttg gcgatggtga aaatgaagca
    16381 aatatggttt atcagttccc gcttccgcca cttgtgctcc ataccttcac ttgccatgat
    16441 acaacgaaac tttcgaagtg ggcgaaatcc atttcacaag tttctagcac agcgacttat
    16501 tttaacttct tagcaagtca tgacggaatt ggtatgcgcc ctgcgaccgg aattctttcc
    16561 gacgaagaaa tcaattctct cgtccaaaaa gcggtccaaa acggtggcca agtttcctat
    16621 aaagacaacg cagatggcac gcagtcggta tacgaactta atattaacta cggtgaagcc
    16681 ctgcaaaacc tgggcgaaga cacaaccgaa gaactcgtaa cgaaaaaaat tatcgctgcc
    16741 catagtattt tgctaacact tcaaggcatc ccagcgattt actatcattc ccttctaggt
    16801 tctaaaaacg accttgttgg ttacgaagaa tccggtatta atcgccgcat caatcgtgaa
    16861 aaactggaaa aaaatcaatt ggttcatgaa cttgaaacag acacttatcg acaaaccatt
    16921 ttcacatcac tgaaaaaatt ggtgccaatc agacgaaacc acaccgcttt ttcaccattt
    16981 gcaacccaag aaattttaga tttaggacca gatgtttttg cgattaaacg ggaatctgag
    17041 gaagaatgta tttacggaat tatcaacgtc acttctcata atatccgcaa aacgctcgct
    17101 ttctctggca cgaatttatt aaccaatcaa cccgtaacga gtgaacttga attaactgca
    17161 tatgaggttg tttggattaa gaaggcggtc caatgaaaat cgtcatcgca cctgattcat
    17221 tcaaagagag cgccactgct gttgaagtag caaatgctat aaaaaaaggc tggactaaag
    17281 cacgtccagc cgatcaaatt agccttgccc ctgtttctga cgggggtgag ggttttctta
    17341 ctgttttaag tgagtcttcc gaggtggaat tatttcaagc agaagtaacc aacctaaatg
    17401 gtcacaaaat aacggcctcc tacggtattc tcgctagcca agaaactgcg attatcgagt
    17461 ccgccaacac gattggatta gatttaatcc cagccgtaga ccgtaatcca gcttacgcga
    17521 gctctaaagg cgtcggtgaa cttattttgg cggcactgaa tcacaacgtc aaaaaaatca
    17581 ttatcggcct tggtggaagt ggcacaaacg atggcggcgc tgggctaatc caagctttgg
    17641 gcgttgcact acttgataaa aacaaacagc ctattccgcc cggtggcatt catttgcaag
    17701 aactagccta cattgatgcc agcaacctta atccaaagct gaaaaacatt caattccaaa
    17761 tagcctgcga cgtcacgaat ccacttcttg gagaaaacgg cgctaccttc gttttcggtg
    17821 ctcaaaaagg cgcaactccc gaaatgctcg ttcaactaga gcgcgccatg cagaactacg
    17881 gagcaaaact cgatcaattt tcatctcaaa aaatcactac aaaaaaagga gccggagccg
    17941 ctggtggtat cgctgccgga ctaatgactt tcctaaatac agacgtgtta agcggttcag
    18001 ctctagttat ggaactttct aatatgaagg ataaaatgaa agatgcggat atcgttattg
    18061 ttggtgaagg acgaatggac aagcaatcga tgatggggaa aatccctgtt caaattgctc
    18121 aagaagctaa aaaacaaggt tgtttcgtcc tagcaatcgt cggtagcctt gcactcgaaa
    18181 acaatatcgc ccaacaacac ggtatcgatg cgtttttccc aaacatccca gaaataacag
    18241 atttacccac tcttttcgaa aatacaacaa agaacctcga acgcacggcg gaaaacattg
    18301 ccaaactaac tttaattggc aaataatttt ttaaactgtt ttccttctaa tcaattcatg
    18361 ctccacttta attctttgca atttaccttg ttcaaaaata gtaaaagcat tttctcccaa
    18421 tttttttagg ttatgatcaa gcgttgtgat ttctaaaacc ttaccaattg ggagattttc
    18481 ttgccctaaa atagcgacat cttccggaac acgcaagccg agttttttca cgtgatacat
    18541 aacccctgcc gcaacctcgt caccattcgc ataaatcgca tcaggccagt ctttcccctc
    18601 tgcaaaaaaa tgctccccag ccttcaaacc atcttcaagc gtataacatt cacttagaaa
    18661 ccgattatca cccactgaac caaaaacttg ctcataagca ttgatttttc catatgtact
    18721 cgtactttca cgcgatgctc tccccgctgt aaaagccact tttttataac cttcatcttc
    18781 caaaaactga aatccagccc ggtatgcttt cacgcggtca atataagagc acgatacctc
    18841 ttttgattcc acatactcgc acgcaataat cggtccatac gctaggtacg gcaaaatcac
    18901 gtcccaatta ttggcacgcg aagtaataat caggccatcc acctgtttcg ttttaagacg
    18961 catcaagtac ttttcttctt ctttcggatc atatcctgtt ggaaaaagcg tcaccgaata
    19021 acggttttta aaagctactt ccaaaatacc atttacaatt ttgtcaaacc acgggtgatc
    19081 attataaggt ataatcacgc caaccgtatt tgttttccca cgcgctaaat ccatggcgct
    19141 acggttaggt gaataatcta attcatcaat aacagcttgc acacgggctc ttttctcctc
    19201 cacaacatac ggatggttat tgagcacacg tgacactgtc gtcactgaaa ctctcgctaa
    19261 tttggctatt tctttaatat ttggcatttt aaaaacctca ttcctaagaa aaaagtgcgg
    19321 acagatttct cataccgcac tcctattttt atcattaagc catctgttca agttcgcttg
    19381 tttggatgtc tttttcgaca cgaaccgaaa ccagtctggc atcattcatt tcttctactg
    19441 taaatcgaag tgtaccgtat tctactacta ctttatcatc ttcttctgga attgtcccag
    19501 ttaaagtaag cacaaatcca gccacagtat ctacgccacg tgatggaagt tccacgtgaa
    19561 acatttcatt gaaatcatca agcggcatgc gaccttctac gataaatgtc gtctcatcaa
    19621 ttttcttcac ttcatccgaa aacacatcat tttcatcgtc aatctcgcca acaatttctt
    19681 ctaataaatc ttctacagtg acaataccag caacaccacc gtattcatcc attaaaatag
    19741 ccatttgatt tctagttctt tgcatatttt taagtagatc gtcaataaac atcgtctctt
    19801 gcgcaaaata cgcgtcttta acgagcgcct tcacatcaat gttttcaaaa cctgactttc
    19861 tcgcttccgc aaaaaaatct ttcatatgca gaatacctag caccgagtcc tgatcgcctg
    19921 taaaaacggg aacccttgaa aaattctcac ttaataatgc gtcacaaagt tcttccgact
    19981 ctgtttcggc atcaatcata aacgcatctg ttcgtggcac catcacttca cgcgcatatt
    20041 tattatccat ttcaaataca ccacgaagca tttgtaattc ttctacctca attacaccgt
    20101 cacgtcgacc ggtttcaatc agtagctgca tttcctctcg cgtcattttt tcattatccg
    20161 tatttttctc cattctcgtt aatttcacaa gaatatcggt tgaaaaagac aggaatttca
    20221 cgaacggacg aagcacaaca ccaactgcca tgattggtcg tacagaaaca cgggcaattt
    20281 tttctgattt ttgaagtgct aaacgttttg gataaagttc accgaaaact aacgtgatat
    20341 atgataacac aatagttacg acgataatgg ataactcttt cgcaaaacta cttcctccaa
    20401 aaacagattc aagtctagtc gcaatactag tggcagctga cgcactggag aaaaatcccg
    20461 caagcgtaat accaacttga atagtagcta gaaatttact tggatcatct acgagtttag
    20521 ctagcataac cgctttttta tcaccggttt ctgcctggct ttttacacga tttttgttca
    20581 atgatacaag ggccatctct gctgaggcaa agaatgcgtt gagcatcgtc aacaccacaa
    20641 taagaattaa ctgcaagata atctgctgac tctcggggtc agggttcata tggaactctc
    20701 cactccttat tttcatcaag aaaacgacca tgcattttct ctaaatattc cggacaattt
    20761 gccggttaag aaaattttat cacgccaccc ctattactgc aaggtttcaa atctccgcga
    20821 aaactttcac agcgtcactt tccatcattt caaatggata aggaagcgaa atctgttctt
    20881 tatttacagc aaaaatccgc gcttttttat ttcgataatc cgttaaatta caaaacggac
    20941 tcacgcgaaa agatgtccct actatcacta tcaaatccgc ttgtcttata gctgcaagag
    21001 attgatctat cgcactctct ggaatcgctt cttcataaag caccacatcc ggacgaatga
    21061 cgccaccaca acccgaatgg atatccgatt tcaagtactc ctcagcggta acagacattc
    21121 cgcatttttg gcaataacaa tgatataaac taccgtgaaa atttacgact ttttttgaac
    21181 ctgctttttc atgcaaacca tcaatatttt gcgtaataat cgtgacatct ttttccgctt
    21241 cgatttcagc catttttgta tgaatcgcat ttggctctgc atccggatag tacatgtttt
    21301 ctgtaacaaa ttgataaaac ttctccggtt cacgcacaag acacgtatgg ctcaacatat
    21361 attccgggct actcatccca gcatataagc cgtttttcga gcgataatcc ggaattccag
    21421 aagggacaga aacacccgcc ccagttagaa aaacgatgtg ttcagctttt ttgagtgctt
    21481 cattcaactt attcattctt taaattcctt tcatttatat gttgtttatc tttccagttc
    21541 caccattttc gcaaatcaac atcttgctcc gcttcatccg tttccgcaac atagactgcg
    21601 cagcgatacg tataaagtac acacggatcc attctctcgc ctcgcttatc gcaagtatcc
    21661 tcatataatt caagcggatt cttccctttt aaatcagcaa cctcttcaac cccaatttca
    21721 tttaacatta acaccatttt tttacctatt cctggtaatt ttattagttc agttggcatg
    21781 atttcccttc tctccgtgca tttttcggtt gaaataaaaa ctgattagta cattgataaa
    21841 aataaagcct gcaactacga ggaagacatc tccgtaacca aaatgggcgg caacacttga
    21901 cccaacaagc ggtccgataa cattcccaat gtattgaaac gattgattat aaccaaaaat
    21961 ccgacctgaa acctcgcgcg gtgtattttt tgtaagcaat gattgaaccg ctggaagcaa
    22021 ggcgccgtct gtaagcccta ataagaaacg taaaatccct agttgtaatg ggttttgtgc
    22081 gaaagccatt ggaatttgga gtaacattga acctatgagc gcacctaaca atattcgctc
    22141 cgaaccaatt cggtctcccc atctcccaag tctcggtgcc gcaataagcg ccgcaacccc
    22201 tggaacagat gcaatcatcc cactaataaa agcgatgttt tgcgcatttc ctgccaaatc
    22261 acgcacgtat aatgtcaaaa tcgggttcac tgagttggac gcaatttgaa tcatcattgt
    22321 cgtaataaat aaggaaataa tcaagcccgg gtttttaagc gataagaaaa cttctttccc
    22381 tgaccgcatt tccttttttt ctactggtgt aaatttctct tttacgaaga acagtgtgag
    22441 gaaaaagcta cctaaaagaa gtgctcctgt gatgtaaaac actggtctga cgccaaatgt
    22501 atccgacaac gctccgccaa ttaacgggcc aattagcaca cccgaaaccg ccgccgtaga
    22561 taatgcccca agagcccagc cgctacgatg acgaggaact tgtgtagcaa taagggcatt
    22621 tgctgttgaa atatatcctg aaaaaatccc cattaataag cgcaaaccaa caaattggta
    22681 tacattgctt acgagtccca tcagaatcat cgctatcgcc atacctagcg cagctcgcaa
    22741 aagcataatt ctccgccctt tttggtcagc tagtttaccc caaattggtg acataatagc
    22801 tgatactaaa aaggtcgaac tgagtgcaat ccctgaccac atgcttactt gatccggatt
    22861 atgcactcct aattcttcaa tatacaatgg taaaaatggc atgattaaat ttaatccggt
    22921 tccggttaga aagcacccca cccagacaac atacaaattc ttcttccaat tttccataaa
    22981 cccacctaga ttcttctatc gttatcctta attattccac aaaaaaagcg aaagtaaaac
    23041 taaacccttc gcttttttgc tatatttgcg taaaatgttt cacgtggaac attttatgct
    23101 tctaaatttc ctcgtggtac ccaaccagct tcattctctt ctgttacgca ccaaacccaa
    23161 ccattaagtt cacgattact ttctaattta tcgcctggtt taacatttaa ttcgcgcgca
    23221 gagtagtctt ctgatacggt tccactcttt ccatcattac tcaattgaat aatttgttta
    23281 ggaacccagc cttcttttcc ggttgacttc actttacaaa aaatccagcc tggatattct
    23341 gtatcttctt caaacaccca aatagactca tttttattca caaaaagggg atttggatat
    23401 tgactaacat gttctttttt cacgataaat gtttgattca tagttagaaa cctacctctt
    23461 tattttttcg ccgcttccca atctgcaaga aatttgtcaa tcccactgtc ggtcaacgga
    23521 tgttttagca tttgttcgaa cactttaaat ggcaccgtag caatgtcagc tccggctttg
    23581 gcacattcaa taacgtggat tgggtgtcgc acacttgctg aaataatttc tgttggaatc
    23641 ccgtgaatct cgaaaatatc cgcaatgtca cgaattagaa ctaagccatc gtcgcctata
    23701 tcatctaatc gacctaaaaa cggtgatacg tatgttgcgc cagctcgtgc tgcaagcaag
    23761 gcctgtgtgg cagaaaacac aagtgttaca ttggttttaa tgccttcttc tgtcaacact
    23821 tttacagctg ccaaaccttc gcctgtcatc ggtatcttta caaccatatt cggatggatt
    23881 tttgcaataa ctcgaccttc cgcaatcatc tcatctgctt ctaaacttac tacttcgcca
    23941 ctaatcggtc cgtcaacaat ggatgtgatt tcttgaatga cctcattaaa atcgcgacct
    24001 tcttttgcaa caagtgatgg atttgtcgtg actccggcaa tgaatcccat tctgttagcc
    24061 tttttaatct cttctacgtt cgctgtatcg ataaaaaatc tcattaaaac atcctccttt
    24121 tctatcaagc gctttcaatt acagagccat tataacgcaa aaatttaaat aatgcttttg
    24181 aagtgctttt ccacaaaaaa aaagaatgcc actgagcatt ccaaaaagtt tcacgtgaaa
    24241 caaaattata atcgagtttt gtccatcact aggagaggct ttggtctatt tctaattata
    24301 tcctctttaa ttaaatgcat gactgtatga gccacgtatt ctcgtgatgt atttgtgtat
    24361 cttgcaagta cttcttgcgt gatttctctt ggtaacaata tcccgttatc agaaaacgtt
    24421 cctaaagttt gagcgcattt gagaatggct ttgcggattc gttcttcctt tttcaagaag
    24481 cttagttttg caaatgtatg ggcttcacgt aattcttctg ccatcacttt aatcataaaa
    24541 aagttgttct catctttttt gtcgaaaata gagaacaaga aattgctatc tacttccata
    24601 acttctccgt gacctaagct ctgcatcgaa acatgcggac tccattcatc gtaaaaaaga
    24661 tgatatagtc caaaactatc tcctttttgc aagaaacgaa caatgctttc tttatagctt
    24721 tcttcttcca tttctgcatc ttcctctaca atcatcccgt atatgccgct tagaacaaaa
    24781 tatacttttg ttccagccgg acttaaactt tctagaacct cacctttctt ggtgctgata
    24841 accgagcagt agtctttgta acttggatgt tcaaagcaca actccattaa tttgctaacc
    24901 gttagattgg attcaagctc ttttaagaat agcatattct ctcctttgct atattatatt
    24961 gaagaaactc ttcgtaatta tatcataaag gctgtattca aaatcctatt cacagtcagt
    25021 cataaaaagc taaaaaccta attaaagata aatatattac aactttttat aaaatactta
    25081 atttatatct cgtttttcgt tagtgtttta tcctaaattc gaactttttg ttacttttat
    25141 taaatattta aagtcagata ataattcaat aactaccact ttagactggt ttatttttag
    25201 ataaattgat tatacttaaa aagtaagtaa tttatggatg ggtaactcag gaagggtgaa
    25261 atgaatggat cagaaaaaat atagttggcg aaaatttttc caattactta ttagcgcaaa
    25321 acctgcgaat tggataattt tctgcgcttt atttgccagt gtgataacta cagttgccgg
    25381 ccttgttgtg ccacttttta caaagaactt aattgatggc ttttcaatag cttcactcga
    25441 tgtaaaaatg attgctttaa ttgtgttggc atttgtttta caagctataa cgaatggctt
    25501 ctcgattttc ttacttaact acatgggtca gaaagtcgtt gcaacgattc gcgaacgttt
    25561 atggaagaaa attgtgcatt taccggtttc ttactttgat aatacaaaga ctggggaaat
    25621 ggtaagtcgc atggtaaatg atacagtggt agtgaaggag ctgattgccg accattttcc
    25681 gcaatttgta actgggataa tttctgttgt cggggcgatt attattttgt tcttcatgga
    25741 ctggaaaatg acactcatta ttttagtggc cgttccgatt actgcgctag ttgttgcacc
    25801 acttggtcag aaaatgttta aaatatctaa aggtcttcaa aatgaaacgg ctgacttcac
    25861 tggttccatt agccaaacgc tatcagaagc taggctcgta aaggcttcga atgcggaaac
    25921 actagaaacc gaggctggcc atcaaggaat taatcgccta tttggctttg gtattcgtga
    25981 ggcgaaagtt gttgctgtgc ttggaccgct aattttcttt gttgtcatgg gggttatcgt
    26041 tggcatcatc ggttacggtg ggattcgtgt ttcagctgga acgatgacta ctggtaccct
    26101 catcgccttt ttgctctatc tgttccaaat tatcgttcct gtcacttctt tcgcaacatt
    26161 cttcgcccaa cttcaaaaag caaaaggcgc aacagaacga attgcggata ttttgaatga
    26221 aacagaagaa gatttcgacg ctggtaaaaa agtagatgtg agcggaaaaa ccattcgcgc
    26281 gtctgatatt tccttctcct ataatgaagg tgagcctatt ctaaaacatg tttcttttga
    26341 tacaaaaccc ggagaagtta tcgcattcgc tggtccaagc ggtggaggta aatcaacctt
    26401 atttgcgatt ttagagcgtt tttatcaacc gaaaacggga gaaattttag taggcgatat
    26461 tcccctttcc gagatttcga tcaattcctg gcgaacacaa attggttatg tctcccaaga
    26521 aagtgcgatg ctttctggta caattcgcga taatctttgt tatggtttgg accgagaaat
    26581 tacggaagat gagctatgga atgtagcaaa actagcttat gctgacggct ttatttccga
    26641 acttcctgac aaaatggcga ccgaagtcgg cgaacgtggc gtgaagctct caggtggtca
    26701 aagacagcga attgccattg ctcgagcatt cttgcgtaat cctaatatcc ttatgttaga
    26761 tgaggctaca gctagtttag atagccaatc cgagcaaatc gttcaacaag ctttggcaaa
    26821 cttaatggaa ggtcgaacta cttttgttat cgctcatcgc ctttctacta tcgtcaatgc
    26881 cgaccaaatt ctctttattg aacacgggga aataactggt cgtggcacac atagtgaatt
    26941 agttgcttcc catccacttt acgcttcctt tgcagaacaa caattaaaat aactatttcc
    27001 cgggaaataa aaaaacgacg atgcgaatat gcatcgtcgc tttttctata aggattgatg
    27061 aaactttttg agttcgattt tctttgcttc gtctaaacca tgccacctga tgccttgaac
    27121 ggctccctca agcgcatata gttcacttag acaaacgctt gaatcatttt cccaaatacg
    27181 taaaaaggct tctttgcttc caacatcttt tagctcgacg ggagttttta ttcccgcttt
    27241 gattaaatcc tgctccagta ctttgccaat gtttggtaat tcgctaaggt tcgccattac
    27301 agttccttct tccatattat tttggtaatt ctattttctc gataccgccc atgtagcctt
    27361 gcaatacttt cggaatgcgt acagaaccat ctgcatcttg gtagttttcc aaaatagcag
    27421 cgactgtacg acctagtgct aacccggaac catttaatgt atgcacgtat tccggtttgc
    27481 tccctggttc acggcggaaa cgaatgttag cgcgtcttgc ttggaagctt tcaaaattac
    27541 tgcaagaaga aatctcacgg taagaattat agcttggaat ccaaacttct aaatcatatt
    27601 ttttagcagc agtgaagcct aaatcagccg tacacatgct taatacgcga tatggtaatt
    27661 ctaggcgacg caatacttct tctgcgtttc cagttaattt ttcaagcgcc gcgtaggaat
    27721 cttctggttt aacaaattga actaattcca ctttgttaaa ttgatgctgg cgaattaagc
    27781 cgcgcgtatc acgaccagca gatcccgctt cagaacggaa acatgcgcta aatgctgtat
    27841 attttcttgg taaatcttct gcttttaaaa tgtcttcgcg gtggtagttt gttactggta
    27901 cttccgctgt tggaataagg aaataatctt ctgcttcaat taagaaagca tcttcttcaa
    27961 atttcggcaa ttgaccagtt ccagtcatgc tcgcacggtt caccatgtac ggtggtaaca
    28021 tttcttcata gccatgttca ttcgagtgca agtccatcat aaagttaatt agcgcccgtt
    28081 ccagtcttgc acctaatttt ttataaaaga caaaacggct accagttact ttcgcagcat
    28141 tttcaaaatc aagaatatct aagtctgttc ctaagtccca gtgagctttt ggttcaaaat
    28201 caaattcgcg tacttcgccc cacttgcgaa tttccacgtt atcgtcttcc gattcaccaa
    28261 ccggagtaga ctcatgcgga atatttggaa tcgacattaa aatcatatct aacttctcgt
    28321 cgatttctct tagctcgatg tctaatgttt taatacgatc accaacgaca cgcatctctt
    28381 caattttagc atctgcgtct tgtttttcgc gttttaattt agcgatttct tgagacactt
    28441 cattacgctg acttttcagc gcttctgtct ccacgattag cgtacggcga cgtttatcta
    28501 actcaccaaa tttctcgaat tcaccaaggt cttccccgcg attttgtaat ttctgcttta
    28561 cttcatcaaa attattacgt aacaatttaa catctaacat gctaactcct cctttatttt
    28621 ttccatataa aaactcccgt actttcccga attaacagga aagggacgag agttaaccgc
    28681 gttgccaccc ttattgggac ttcaaaaaat ccccagcttc atttaggttt aacggaccca
    28741 accggaatga tttactcgca aaattatgct ttccaccact cactccaaga tggattcata
    28801 aggaaacttc accagttcac accacccact ggctctcttt agaaattctg cctcattact
    28861 acttcttgtc ttcgcttttc gtattaattt aaagttattc tatcgcatat ctgcttaaat
    28921 tacaagcaaa tctttaaccg attaaatcga gcgtgtctgg accgtcatca tcagaattca
    28981 atattctaat ttgttcaggt acaattttta taacgacaaa ggacggtgaa tcttcgcctt
    29041 ggaaccattc tttagaaatg ttttcccaaa tgcgttcttt gattgattca tcttcttcaa
    29101 gagaagccaa accattaatt tctaaaaacg cagaccctgg gctttcgtaa ccaattaaaa
    29161 cggatacatg tgggtttcta cgtacttctt ctgtctttgg taattctttg ccagacggtg
    29221 tgtaaagggt taaaccatcg tgcagaaacg tcatatatct agcatgagga tagtctcctt
    29281 gtacggatgt taatacaccc acttgatgtt gttccaaaat ggcaagaatc ttatcttcta
    29341 gttcattttt catctcaaac accttccttt ggttatttag tgtacctttc cactcggctc
    29401 ccggctttaa acattcgggc ttgttatctc tctagctatt tgctataaaa gagtataacc
    29461 gttttaacta gggggattta aagtgatttt aatcatcgac cataatgatt catttacata
    29521 taatttatac caatattttt tagagcttca agaggaggta caggttgttt ctgctactaa
    29581 tttttcgctt gaaatatttc aacaactcgt tcccgaaatg gtagttctat caccagggcc
    29641 aggttcaccg gaagacttcc ctgtaagttt ggcactacta ggtaaaattc aagttcctat
    29701 tcttggcatt tgcctcggtc atcaaatgat tggtcatttt ttcggggcaa aagtggtgcc
    29761 ggcaaaagtc ccggttcacg gaaaaacaag tatcatttcg catactgggg aagggttgtt
    29821 tgcagagctt gcaccaaagt tccaagtaac gcgctaccat tctttagtta ttgatcctgc
    29881 cacagttccc gctaatttaa aagtaaccgc actgacagaa gacggcgtta taatgggact
    29941 agctcacgta tcaaaaccga ttcacagcgt ccagttccac ccagaagcaa tcctatctga
    30001 aaacggacat gcaatacttg aaaactttat acgattaggg agaaatgtta aatgagctta
    30061 ttacgatttg attttgaagg cgacacaaaa atttttgaaa atccactgta tgaactagtt
    30121 acgcatgatt tagcagaagt tcttcctata atgaaagcag ccgaagaagc ccaaaaatca
    30181 ggaaaatacg tcgccggttt tgtcagttat gaggccgcgc ctgcttttcg aagtaattta
    30241 aaaacaaaaa aaccgagcgg aaacatgccc ctcgtctggt ttggtgtata cgataatttt
    30301 aacgatacag ctaccgaaac accagattcc tcgccgctct cttttaaaat gaatactagt
    30361 ttccctgaat acgccgagaa aatagagcaa atcaaagctg aaattgcagc tggaaatact
    30421 taccaaataa actacaccgt gcgacttcaa agtgatgtgc caaacagctt ttcttctcaa
    30481 gcgacttatg aaacgttaca gcagattgga aaggcgaatt acaccgccct actttcaacc
    30541 agtgactttg agattatctc ggcttcaccc gagctctttt ttaaatggaa ggaaaatctt
    30601 ctaacgacac gcccgatgaa aggtactatt cgccgcggaa taacggagca agcggactta
    30661 gaagcacatg attggctaaa aaacgatcct aaaaaccgtg cagaaaatgt gatgattgtc
    30721 gatttactac ggaacgacct tgggatgatt gctgtacccg ggagtgtcaa ggttcctaag
    30781 ttaatgacgc tagaacctta cccaactgtt tggcaaatga cttcaaccgt tacagcagaa
    30841 acacctcctg agactgattt aacagctgtt tttaaagcac tcttcccatg tggctcaata
    30901 actggtgcgc ctaaagcacg aacaatggaa attatttcag aactagaaga ttctcctcgt
    30961 ggtgtttact gcggagcaat tggcttttta gaacctaacg gaaatgcgat tttcaatgta
    31021 ccgattcgta ctattgctat cgcagacaac aaggcaactt atggtgttgg tggcggtatc
    31081 gtctgggatt cggaagccgc tagcgaattt tccgaaatcc acgcaaaatc agctatttta
    31141 gaaaagacga caaaattttc tttaattgaa tgtttgcgaa ttgaaaatgg tgagcttttc
    31201 cgaaccgaat atcatttaaa acgactacaa acaagcgcag actttttcgg tattcctttt
    31261 aatagggaag aaacagagaa actatggacc aaaactgcgc aaaaaaatac gaccgacaca
    31321 tacaaaatgc gctttttatt acatcctgat ggcgcacatg atctagaact aacaagaatt
    31381 gatacaaaaa acaagcgaat aacagcgcaa cttgctgata aaccagtccc ttcgaatgat
    31441 ttatttctct atcataaaac gactcatcga aaggtctatg aaaacttaaa aaatactcaa
    31501 accgaggaaa cactactttg gaatgaacgg ggtgaactga cagaatttat taacgggaat
    31561 atagttctag gtataaatgg ctgttttttc acgccaccag taacttcagg tcttctttca
    31621 gggacaatga gagcagaact attagctaaa aataagattt ccgagaaaac actagcaaaa
    31681 aaagaccttt tagaagcgga ctatgtgtgg ttaattaata gcgtaagagg atttatagaa
    31741 gtagaaatca aacaataaaa gaatagaaat ttcacaattt aaaaatgaaa taatttgtca
    31801 aattcgccat attttcgcca catttataat ttgtgaaaaa attacttgca aattttcaca
    31861 atctatatta gaatatgtgt tcgcacgttt ttatttccgt tttccaaggg aggaaaatca
    31921 tgaaagtatt gtttcaccat ctaaaaaaat acaagctaca agcgacacta tctacactgt
    31981 ttgtagtagt catggttatc tcacaactat ggcaaccaaa gttacttcag caagtcctag
    32041 acgccatcat gaaagatgat atggatgaaa tctcatccat cggcgcactt ttaatcggta
    32101 ttgccgcagt cggccttatc gccgggatcc taaacacaat actttcagcc aaagtcgctc
    32161 aaggcgtcgg tgcagatatt cgtgaatcta gtttccgtaa aatccaaaca ttttcattca
    32221 gcaacatcga aaaactttcg acaggtaatc tagttgttcg acaaacaaac gacattaccc
    32281 aagttcaaaa cttagtgatg ctttcactac aatcgcttac gagaattccg attatgttca
    32341 tcggggcttt tattttagcg atgtttactt tacctgaatt atggtgggta attattgtac
    32401 tcgttgttct tgttgttctg attgttgtat tcacattcgg gtctatgggt aaacattttg
    32461 ccattattca gaagttaatt gaccgagtga attctattgc aaaagaaaac cttgctggca
    32521 tgcgcgtagt taaatctttc gtgcaagaag ataatgaaat cagtcgcttt acaactgtca
    32581 gtgacaaatt aactcgccac acaatcatcg ttggaacgct tttctctgta atgattcctg
    32641 catttatgct cgtttctaac ttagcaattg ttgtttctat tttctttgta ggcgatatgg
    32701 ctgcagataa tcctgaagtt atcggagcta tcgcatcatt catgaactac ttaatgcaaa
    32761 ttatgatggc aattattatt ggtggtatgc tgatgatgat ggcttctcgt gcgcttattt
    32821 ctttgaagcg tattaccgaa gttctggaaa cagaaccaga tattacttac aatgaaagcg
    32881 cgccagaaca agatttagaa ggtacagttg aattccgtaa cgttagtttc aaatacgacg
    32941 gtgacgatac gcctgctctg gaagatattt cattcaaagc aagtgttggt gagatggtcg
    33001 gtattgttgg tgcaacaggt tctggtaaat ccactcttgc ccaactaatc ccccgacttt
    33061 acgacccaac ggaaggtgaa gttattatcg gcggaacgaa cctaaaagat atcaacaaaa
    33121 aaacgcttcg cagcactgtt tccttcgtgc tccaacgcgc gattcttttt tccggaacaa
    33181 ttgcagacaa tttacgtcat ggtaaaaaag acgcaactgc agaagaaatg gaacacgcaa
    33241 gtaaaatagc acaagcgaaa gagtttatcg acaaacaagc aaaactttat gaagctcctg
    33301 tttccgaacg tggaaacaac ttctccggtg gacaaaaaca acgcctttcg attacacgtg
    33361 gcgttatcgg ttccccgaaa gtcctaatcc tcgatgacag cacaagcgcg cttgatgcaa
    33421 aatccgagaa attagtgaaa gaagcgctga ataaagagct agacgacaca acgactttca
    33481 tcattgcaca aaaaatctct tctgttattc aagcagataa aattctcgtg ttagataaag
    33541 gtaaactcgt tggcgtcggt tcccataaag aacttctaaa agaaaatgaa acttaccgtg
    33601 aaatttacga cactcaaaaa ggcaaggagg taaccgcata atgaaagagt ttaaacaaat
    33661 tagtcgcttt ttctggcact atctgcgggg gtataaacct caactttttg tcattttaat
    33721 tgctgtagtt tttgcgacat accttcaagt aaaagcacca caatatattg gtaacgccgt
    33781 tcaagaactt ggagattacg ttgttaattt aatgcaaacg ggtgttgatg acaagagtga
    33841 cttcatccat atcatttgga tgctgattct ctgctacgta ctcctcgctg ctgccacttt
    33901 tatccaaagt atcattatga caggggtagc tggtaaatcg acgaacagaa tgcgtatagg
    33961 acttttccgc aagatggaaa aactatcaat ccgtttcttc gatagtcgca atgatggcga
    34021 aatgcttagt cgtttcacta gtgacttaga taatatttcc aacacactaa accaagcatt
    34081 gatccaagta ctatccaacg tcgcgctaat gattggtgtt atcatcatga tgttccaaca
    34141 aaacgtggaa ctagccttcg ttactctaat atctgctcca tttgcgatta ttattgcgac
    34201 agtgattatt cgaaaagccc gcaaattcgt tgatattcaa caagatgaac taggcgtact
    34261 taacggctac attgacgaaa aaatctctgg tcaaaaaatt attatcacaa atggcttaga
    34321 agaagaaaca attgacggct ttgttaaaca aaacaatatc gttaaaaacg caacttacaa
    34381 aggtcaagtt tactccggtt tacttttccc aatgatgcaa ggtatttccc tattaaatac
    34441 agctattgtt atcttcttcg gtggatggtt agctctaaac ggcgaccttg aacgcacagc
    34501 cgctcttggt ttaatcgtta tgttcgttca atattcacaa caattctata tgccacttac
    34561 acaaatttcg tcccagtaca gcttgctaca actagcaatc actggtgcgc gccgtgttag
    34621 tgaagtattt gcagaggaag aagaagtaga acgcgaaaac ttacaaacaa ttgatggtat
    34681 taataaaggt gtcaaactag atcacgtaga ttttgcttat gaccctgcaa aaccagttct
    34741 aaaagacgtt tcgattgatg taagtaaagg taaaatggtt gctcttgtcg gtccaactgg
    34801 ctctggtaaa acaactgtta tgaaccttct taatcgcttc tataatgtcg atggtggcgc
    34861 gattctcttt gatgatatcg acatccgcga tattcgccta gattcccttc gtaaacaagt
    34921 cggtatcgtg ctacaagatt ccgtgctatt cacaggaacc attcgtgata acattgtttt
    34981 cggtaagccg gaagcaagcg acgacgaagt aatcaacgct gcaaaacaag ctaacatcca
    35041 cgacttcatt atgaacctag aaaaaggtta tgaaacagaa atcagtgatg aaaacaatat
    35101 tttcagcgtt ggtcaaaagc agcttatgag tattgcgaga actattatta caaatccgtc
    35161 tcttctaatt ctagatgaag cgacaagtaa tgtagatacc gtaaccgaaa gccgcatcca
    35221 aaaagctatg gacaacgtaa tctctggccg aactagcttc gtcattgccc accgtttaaa
    35281 aaccatcctc gatgccgacc atatcgtcgt gctacatcaa ggtgaagtga ttgaacaagg
    35341 taaccatgat gagctgatga aggcggaagg attttattct gagctttatc ataatcagtt
    35401 tgttattgaa taaataatca ctcttccaaa gagtgattta tctggcaggc aaaacgttgt
    35461 ctaactagta aatttaaagc gagtccttat ctttttcaag taagggctcg ctttaaattt
    35521 caattgcgct agcatctttt ttttgctata ttaaaggata gtaacgtctc atatagggag
    35581 tggagaaaaa gagtgttaaa taaaaaaa
//
LOCUS       DASDYK010000015        35214 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.015, whole genome shotgun sequence.
ACCESSION   DASDYK010000015 DASDYK010000000
VERSION     DASDYK010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 35214)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35214)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35214
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.015"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(63..803)
                     /locus_tag="U0308_000785"
     CDS             complement(63..803)
                     /locus_tag="U0308_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2315774.1"
                     /translation="MKKIAIFGSAIVLFCLLIWGYFYFNSEPSTTAENAANSTKAVDV
                     LEENDILVFTPRKLDADMSVILYPGAFVDALSYAPLANKLASSGYKTYIVEMPLNLAV
                     FGKNRAADIIDEAPDEKFVIGGHSLGGVMSSRFAHDNESEIEGAFFLASYPDKKGSLK
                     NASFPALSVTATKDEVLNQDSYNKNKKYLPKDTTFVSIKGGNHAQFGSYGEQHGDGKA
                     TISGPEQTDQVANALITWLNTSVKNQER"
     gene            complement(922..2037)
                     /gene="mnmA"
                     /locus_tag="U0308_000786"
     CDS             complement(922..2037)
                     /gene="mnmA"
                     /locus_tag="U0308_000786"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEM2315775.1"
                     /translation="MSTNNSDIRVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDD
                     TDEFGVCTATEDYDDVIRVANQIGIPYYAVNFEKEYWDKVFTYFLDEYKLGRTPNPDV
                     MCNKEIKFKAFLEHAESLGADYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLS
                     QDQLKKVMFPLGGMEKTEVREIAKKAGLATANKKDSTGICFIGERNFKQFLSEYLPAQ
                     PGEMRTLNGEVLGKHDGLMYYTIGQRHGLGIGGDGEPWFVVGKDLKENVLFVEQGFHH
                     ETLYSDSLIATDISFTTNAEKPKTIECTAKFRYRQTDTKVTVHLREDGTAEVVFADPV
                     RAITPGQAVVFYDGDICLGGGTIDTVWKNGAKLDYVG"
     gene            complement(2056..3204)
                     /locus_tag="U0308_000787"
     CDS             complement(2056..3204)
                     /locus_tag="U0308_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM2315776.1"
                     /translation="MENRIYLDHAATSPIHPEVIQTMLGAITNTYGNPSSIHYAGREA
                     RKALDEARHTIADSIHAIEKEIIFTSGGTEGDNLAIIGAALAQQESGKHIITSQIEHH
                     AVLKTCEYLETQGFEVTYLPVDEHGIVSIESLQEALRPDTILVSIMYGNNEIGTIQPI
                     AEIGAVLRNHQAIFHTDAVQAYGLLNINVTELGVDLLTTSSHKINGPRGVGFLYVKNG
                     TRLIYQMHGGEQERKRRAGTENLAGICGFSAASSIMMNERELKNEEYISFKKRMAEIW
                     RSADLDFEVNGLEANTLPHVFSVRFPGVSIEQLLMNLDMDGIAVSSGSACTAGTVDPS
                     HVLVALFGENHPAIQETVRISFGLGNHLEEVEMAATKISEVVTRLMKI"
     gene            complement(3319..3514)
                     /gene="ssrS"
                     /locus_tag="U0308_000788"
     ncRNA           complement(3319..3514)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="U0308_000788"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(3585..4868)
                     /locus_tag="U0308_000789"
     CDS             complement(3585..4868)
                     /locus_tag="U0308_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003723700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEM2315777.1"
                     /translation="MAIQPLAYRMRPKALDEIVGQTHLVGKDKIIYRMVKAKQLSSMI
                     LYGPPGIGKTSIASAIAGSTKYAFRTLNAVTNNKKDMEVVAAEAKMSGTVILLLDEVH
                     RLDKAKQDFLLPLLESGAIILIGATTSNPYIAINPAIRSRTQIFELKPLTVEDIMITM
                     DRALSDKERGLGNYDVEIDEVAKKHFATASNGDVRSALNALELAVISSEPNEDGVIHI
                     TLDVAEECLQKKSLAHDKDGDAHYDVLSAFQKSVRGSDVNAALHYMGRLIEAGDLVSI
                     SRRMLVMAYEDIGLASPQAGAHTLAAIQTAEKVGFPEARIPLANAVIELCLSPKSNSA
                     IMAIDAALADIRQGKSGEVPDHLRDGHYSGAEKLGRAIDYKYPHNYDNAWVDQQYLPD
                     RLKNKLYYAPKFTSKFEQTIAGVYQKINENKAKKE"
     gene            5017..5439
                     /locus_tag="U0308_000790"
     CDS             5017..5439
                     /locus_tag="U0308_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM2315778.1"
                     /translation="MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQ
                     LIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVESMEDEEAAQRE
                     LWTRMRNAVRDVLDQTTLADLLKHSTDAELSDGYMFYI"
     gene            5684..6889
                     /locus_tag="U0308_000791"
     CDS             5684..6889
                     /locus_tag="U0308_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEM2315779.1"
                     /translation="MESVFMFFCTLLVWLMTPGIALFYGGMVRRKNVLSTAMYSFSSM
                     AIVSILWVIVGYSLAFAPGNGFIGSFDWTFLHNVGFAANDTYSDAIPHILFMMFQMTF
                     AILTVAIISGAFAERMNFSAYLIFIILWSLLVYSPVAHWVWGDGGWLRNLGALDFAGG
                     NVVHISSGVTGLVLAIMIGRRKEADSASPHNLPLALIGGILVWFGWYGFNVGSALTID
                     NVAMIAFVNTNTAAAAGIIGWGLVEWLTNKKPTMLGTISGAIAGLVSITPAAGFVTVP
                     SSLIIGFLGGALCFWAVFWLKGKVKYDDALDAFGLHGIGGIWGGIATGLFATTKVNEA
                     GADGLFYGNASLVVKQLIAIGSTVAYVAIATAIIVVIIKLFLPIRVNEEQEYKGLDLT
                     LHGEKAYQE"
     gene            6903..7268
                     /locus_tag="U0308_000792"
     CDS             6903..7268
                     /locus_tag="U0308_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEM2315780.1"
                     /translation="MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKG
                     FIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEV
                     VKISTGETGIDALQDKPSK"
     gene            7418..7798
                     /locus_tag="U0308_000793"
     CDS             7418..7798
                     /locus_tag="U0308_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315781.1"
                     /translation="MRKIPIFTVLVAILLFGGYYLYQHASSKVDVTFNFVVDQKSKNN
                     TITGKIDGAGNKSITLPLSEESWDAVKKGNRYNVEATFYNKNKISSSEAKELDGPFWS
                     NDSNRGLLVNKVHVENIQELSDDF"
     gene            complement(7838..9613)
                     /gene="aspS"
                     /locus_tag="U0308_000794"
     CDS             complement(7838..9613)
                     /gene="aspS"
                     /locus_tag="U0308_000794"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEM2315782.1"
                     /translation="MEKRTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDRE
                     GIVQVVFNPEFSKEALEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEI
                     TILNSSKTPPFYIEDGVNVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDAL
                     GFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIV
                     RCFRDEDLRGDRQPEFTQIDLETSFLTKEEIQAITEDMLVDVVKEAKNITIDKPFPRM
                     TYKEAMDRFGSDKPDIRFGLELQNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAAN
                     FSRKDLDALGVFVANYGAKGLAWLKVEAGELKGPIAKFFPEEKATELKASLQAEDGDL
                     LLFAADKADIVAASLGALRNKLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAH
                     HPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFT
                     DESAKEQFGFLMDALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPL
                     TNAPGEVSEAQLAELKLETVKKETN"
     gene            complement(9615..10892)
                     /locus_tag="U0308_000795"
     CDS             complement(9615..10892)
                     /locus_tag="U0308_000795"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEM2315783.1"
                     /translation="MDLQLPRGTRDILPEEVSKWHFLETEFKKVCENYQYEEIRTPVF
                     EHTELFERGVGDSTDIVSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQP
                     IKMYYNEPMFRYERPQGGRQRQFTQMGIEALGSDDPSIDVEVISLAMEFFRKIGLINI
                     KLVINSLGDKESRLKHREALVAHFEPHIDEFCAECQVRLHKNPLRILDCKKDHDNPLI
                     QSAPSILDFLNEESVAYFENVKKYLNALEIPFEIDSTMVRGLDYYNHTTFEIMSVEEG
                     FGAKTTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLALEKADIKIPAKKPLEVYV
                     ITAQPEAELKAVTLVNKLRQNGISAEKDYLKRKFKAQLKDANRKNAVYTIILGEEELQ
                     TGNYQLKNMETGEQEAVSETTILEKLINTKGEN"
     misc_binding    complement(10956..11183)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            11343..12626
                     /locus_tag="U0308_000796"
     CDS             11343..12626
                     /locus_tag="U0308_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEM2315784.1"
                     /translation="MKNKFIFITVVSILLIAAGIFTTIAMANANSVVVKAEVLNVRSG
                     PGLAYDVTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAI
                     VSSDGGLNVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIR
                     ESVTKVDESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTT
                     SGEEGYVANWVVDVSDKGQTSSPRSKTTKLSEATIVIDPGHGGNDPGAKGSNGTIEKE
                     MTLKTAKQLKQKLEARGAKVILTRNSDKYVSLKGRTNIAAENNADVFISIHFDSLEDA
                     SKGVSGQTTYYYDNSDKSLAESINTTLGKDLPTTNRGARVGDYYVVRENSQPAVLLEL
                     GYLSSAKDESNINSASYRSQIAESVTDGLSNYFSN"
     gene            complement(12664..13116)
                     /locus_tag="U0308_000797"
     CDS             complement(12664..13116)
                     /locus_tag="U0308_000797"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HEM2315785.1"
                     /translation="MRVLLQRCYEASVSVEEEVISEIAGGLCLLVGFTHKDTPETVDY
                     MAKKIVGLRIFEDESEKMNISLAERGGAILSVSQFALYADVSRGKRPSFTKSAPAEKA
                     ETLYDLFNQKLTEAGFIVETGVFGAMMDVKIVNHGPVTIMLDSDEMRK"
     gene            complement(13132..15348)
                     /locus_tag="U0308_000798"
     CDS             complement(13132..15348)
                     /locus_tag="U0308_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEM2315786.1"
                     /translation="MAKEQNLTAEQVIDMASHYMNQEHLALVKKAYEFARDSHKEQFR
                     KSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV
                     DGVTKLGKIKYKSHEEQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPVEKQ
                     RRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARERYL
                     HDVIDGVNENLDELNIQADISGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSIK
                     DCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQ
                     IAEYGVAAHWAYKEGKVVNSKTSFDNKLTWFREILEYQNESDNAEEFMESLKLDLFSD
                     VVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDIID
                     ILTSKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLVEKEIRQLGFES
                     KKIMTPENLRKLADKLNFSHEDDLFAAVGYNGITALQVANRLTEKLRKERELEAETEK
                     LLTQSENKPSNSDANNEKLKIKHNAGVVVQGVGNLLIRLSRCCNPVPGDAIVGYITKG
                     RGISIHRQDCPNVQAIEPERLIEVDWEDADSQAKNDYNVDIEIYGYNRNGLLNDILQV
                     INSLTSNINGVNAKVDNNKMATLVVTLQIHNINHLQRVVDKIKQIPDVYTVRRLMN"
     gene            complement(15554..16075)
                     /locus_tag="U0308_000799"
     CDS             complement(15554..16075)
                     /locus_tag="U0308_000799"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEM2315787.1"
                     /translation="MEIKDLQDYVAIVNDWPKKGIVFKDITPLMNDGEAYRFATDKIV
                     EYAKELKIDIIVGPEARGFIIGCPVAYALGIGFAPVRKPGKLPRETIEMEYDLEYGTN
                     KLSMHSDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGIVAGCAFLIELKELEGHK
                     KLNGYDRLILMQL"
     gene            complement(16065..18416)
                     /gene="recJ"
                     /locus_tag="U0308_000800"
     CDS             complement(16065..18416)
                     /gene="recJ"
                     /locus_tag="U0308_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEM2315788.1"
                     /translation="MIHSKYLWNIEEAAEDKASQLAEQLKISLPLAKLLWKRKITTQG
                     QFDKFFHPEKYESYDPFLFAEMDLAVARIKRAIELNEQILVYGDYDADGVTSIAVLMK
                     TLRHLGANAEFYIPNRFTEGYGPNITAFDMAKNQGTDLIITVDNGIAALEVMTHAKEI
                     GLDVIVTDHHEPREVMPEAVAVIHPKHPKSAYPFDELAGVGVAYKLSHALLGEEPKEL
                     LDLVAVGTVADLVSLTDENRLLVQLGLRQLRESANLGLSVLAKKASLKLEEATEETIG
                     FGLAPRLNAVGRLGPADPAADLLLTEDPEEALFLAEEIDDANKERKQIVVDTTKLAME
                     AIEAKETLGNVLVVYGEGWNTGILGIVASKLVGTYSRPAIVLGIDPVTGIAKGSGRSV
                     DAFHLYQALDKHRDLMTAFGGHPMAAGLTLPAENLTELEAKLQEEASFLSEEDFRPAL
                     KIEEKINIADVSVAFIAQLEKLAPFGMDNPKPIFLLENMHLKGTKRIGADKTHLKTML
                     ATEENDATLDSIGFGVGDLVEKISPNAAVDVVGELSINEWNNVKKPQLRMMDIHISHW
                     QLFDVRNKSEWARILQEQTESRVFVCFEERTIGTLGEKNYILVDEKADFTADFQTEEL
                     VFADMPTKTELVETIVRETKPERIFVHFDAAEGNQIPAIPDRLAFAELYSLIKKFQPF
                     PIKKYTPRLMQKFGWNKEQIDFMSKVFFDLEFAKMESGQIIINEVVEKRNLDESLVYQ
                     QKVEEITTRKKLLYSNYTELHSWMESMMETSIYPNAEELENGN"
     gene            complement(18521..18865)
                     /locus_tag="U0308_000801"
     CDS             complement(18521..18865)
                     /locus_tag="U0308_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HEM2315789.1"
                     /translation="MKENKVQWQVIAGIILALIIAIFAVINVDPVEVNFLFAQAEWPL
                     ILIILGSVLCGCLIIFFLNIAKSRGMKKQVKQLTSEKAELERQLAAAKAMKTHSSKVE
                     TRDTENVVDTTK"
     gene            complement(18963..21227)
                     /gene="secDF"
                     /locus_tag="U0308_000802"
     CDS             complement(18963..21227)
                     /gene="secDF"
                     /locus_tag="U0308_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecDF"
                     /protein_id="HEM2315790.1"
                     /translation="MVKKSKIVIFFLVVAIIFGAVFGTAKMVMQNINLGLDLQGGFEV
                     LYEVSPADGKGTVSKQTLTDTVTSLDKRINSLGVAEPSIQIEGDNRIRVQLAGVTDQE
                     EARKMLSTTAQLSFRDANDKMMMNGSDLVAGGAKQAFDSSNNPIVTLKLKSADKFASV
                     TKTILAEAPDNQLVIWLDWKEGQKYKTEREKKDPAYLSAPNVSSVLDTDKVEISGSFT
                     TEEAKDLADLLNSGALPVKMKEVYSTSVGAQFGQDALQETILAGIIGVIAIFIFMMAV
                     YRLPGVIACITLVAYTYLVLLILSLLNATLTLPGIAGLILGIGMAVDANVITYERIKE
                     EIKVGRSTKAAFEVGGKEAFRAILDGNLTTLIVAAVLFYFGTSSIKGFATVLIISILV
                     SFLTAVWGSRFLLGLLVKSNWLNNKPGFFAVKRKDIHNLHEGINSFSLKTHFDRFDFV
                     KHHRLFLSIFAAIVIVGIVILSIFRLNLGIDFASGTRAEVTANQTLTETQIKKDLDAI
                     NMPSDDIVFQGSGSKTAVVSYKGTLSQNDVAKFKNYFEDKYKHEPSISTVSPTVGKEL
                     AKNGFWALGVASVLIVLYIAVRFEFYMGIAAILSLLFDAFIIFIFFSVTRLEVDLTFI
                     AAVLTVIGYSINDTIVTADRIRDISMKMQRFKTKEEIANAVNKALRQTFTRSINTILT
                     VIFTVLALVLFGSESILNFSIALLVGLVSSVFSSIFMAMQLWYVFKARQLRKKGPIST
                     VKKKKPRNNGQPVV"
     gene            complement(21328..21618)
                     /locus_tag="U0308_000803"
     CDS             complement(21328..21618)
                     /locus_tag="U0308_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="post-transcriptional regulator"
                     /protein_id="HEM2315791.1"
                     /translation="MDTFSEWYEDLAPAISIKVEDFHILGYREIKASHIWAFLTEEKW
                     KNEPTPALHERINDVMQMNIGQLMQFIMTTAEQESNNHVSQADSMLQPNVED"
     gene            complement(21761..22090)
                     /gene="yajC"
                     /locus_tag="U0308_000804"
     CDS             complement(21761..22090)
                     /gene="yajC"
                     /locus_tag="U0308_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEM2315792.1"
                     /translation="MGGIVTFIPIILMIVLFYFLLIRPQQKRQKEVQNMQSSLAKGDK
                     IITIGGLHGIVEAIEDGTVILKCGNSKLTFDRNAIRTVLEKGNAVSNPVVAETTSDDT
                     EVVEDNK"
     gene            complement(22124..23263)
                     /gene="tgt"
                     /locus_tag="U0308_000805"
     CDS             complement(22124..23263)
                     /gene="tgt"
                     /locus_tag="U0308_000805"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEM2315793.1"
                     /translation="MSAIRYELIKTDKQTGARLGKIHTPHGTFDTPMFMPVGTLATVK
                     TMSPEELKAMGAGIILSNTYHLWLRPGEELIREAGGLHKFMNWDQPILTDSGGFQVFS
                     LSKMRDIKEEGVHFRNHLNGDKLFLSPEKAIQIQNALGSDIMMSFDECPPYPASHEYM
                     KKSVERTSRWAERGLKAHVRPEDQGLFGIVQGGAYEDLRAQSAKDLVSLDFPGYSIGG
                     LSVGEPKDVMNRVLEHTTPLLPANKPRYLMGVGSPDSLIDGVIRGVDMFDCVLPTRIA
                     RNGTCMTSSGRLVIKNAKFTHDFRPIDENCDCYTCKNYSRAYIRHLIRCEETFGIRLT
                     TYHNLHFLLNLMKQVRGAIMEDRLADFREEFFEQYGFNRPDAKNF"
     gene            complement(23350..24378)
                     /gene="queA"
                     /locus_tag="U0308_000806"
     CDS             complement(23350..24378)
                     /gene="queA"
                     /locus_tag="U0308_000806"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEM2315794.1"
                     /translation="MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGDIKDQHFT
                     DIISYLNEGDALVLNDTRVLPARLHGIKDETGAHIEVLLLKQKEGNAWETLVKPAKRI
                     RKGATITFGDGALKAICLEELEHGGRILEFSYEGIFYEVLEQLGEMPLPPYIKEQLAD
                     QDRYQTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVED
                     TTNHKMHSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESG
                     WTEIFISPGYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFS
                     FGDAMFIH"
     gene            complement(24382..25389)
                     /gene="ruvB"
                     /locus_tag="U0308_000807"
     CDS             complement(24382..25389)
                     /gene="ruvB"
                     /locus_tag="U0308_000807"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEM2315795.1"
                     /translation="MDERIISSETVDAEEVSFETSLRPQNLSQYIGQDKVKNNLTVFI
                     EAATLRNEALDHVLLYGPPGLGKTTLAMVIAAEMGSQIKTTSGPAIERPGDLATILTS
                     LEPGDVLFIDEIHRLSRAIEEILYPAMEDYCLDIVIGTGPTARSVRLDLPPFTLIGAT
                     TRAGLLSAPLRDRFGVIDHLEFYTEEQLTEIVLRTSNILDTKIDDLGAREIARRSRGT
                     PRIANRLLKRVRDFAQVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTIIQSFR
                     GGPVGLDTIAASIGEERETIEDMQEPYLLQIGFLQRTPRGRIATETAYNHLGISYEKE
                     V"
     gene            complement(25405..26010)
                     /gene="ruvA"
                     /locus_tag="U0308_000808"
     CDS             complement(25405..26010)
                     /gene="ruvA"
                     /locus_tag="U0308_000808"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEM2315796.1"
                     /translation="MYDYIKGTVTTITPEYIVVEAGQIGYQIITGNPFSFQRLEGTEA
                     QVFLYQHVREDNISLFGFQTTEERYLFKKLLSVSGIGPKSALAIIASGDVVPLISAIE
                     SEDDVYLTKFPSVGKKTARQIILDLKGKLADVVASEIVYVAPENDMVAGLSPQLEEAV
                     LALEALGYSTRELKKVIPKLSKEEDLTSDAYIKLALQLMTK"
     gene            complement(26134..27069)
                     /locus_tag="U0308_000809"
     CDS             complement(26134..27069)
                     /locus_tag="U0308_000809"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HEM2315797.1"
                     /translation="MKPRKVMIIGAGNVGTAAAHAFVNQKFVEELILVDLNKERVEGN
                     RKDLADAAAFMPGKMDITVRDASDCADVDIAVITVTAGPLKEGQTRLDELRSTSRIVS
                     SIVPEMMKGGFNGIFLIATNPCDIITYQVWKLSGLPRERVLGTGVWLDTTRLRRLLAE
                     KLDIAAQSIDAFILGEHGDSQFPVWSHSSIYGKPVNEYSVEKLGEALDLKQIGETARD
                     TGFEIYHQKGCTEYGIGGTIVEICRHIFSGSQRALTVSCVLDGEYGESGLAIGVPAVL
                     SQNGVKEIISLKLDEKEKEAFANSVAVIKKSIQSI"
     gene            complement(27139..27864)
                     /locus_tag="U0308_000810"
     CDS             complement(27139..27864)
                     /locus_tag="U0308_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2315798.1"
                     /translation="MSGHSKWNNIQGRKNAQDSKRSKVFQKLAREIFVAAKKGPDPNL
                     NPSLRLVMDKAKAVNMPNDNIKRAIDKAAGNTSGENYDEVTYEGYAPGGIAVLVHALT
                     DNKNRTSTNVRVAFNKNGGSLGETGSVSYMFDRKGYLVILREGLDVDEEEFMLEAIEA
                     GADDVEVSEDVFEIFTDPATFPEVKEALQEAGYTFATAELSMFPTVYNEVAENNQTQF
                     DKMLEALEDDDDVQEVYTNAEIN"
     gene            complement(27975..28823)
                     /gene="pheA"
                     /locus_tag="U0308_000811"
     CDS             complement(27975..28823)
                     /gene="pheA"
                     /locus_tag="U0308_000811"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011702338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEM2315799.1"
                     /translation="MKIAYLGPAASFTHAAAAKAFPKEEMIAKSTIPDCIMAIEKEDV
                     DVAVVPIENTIEGSVNITLDYLFHFSSVPVVAEIVLPIAQHLMVHPAHVSAWKSVQKV
                     MSHPQALAQCHTFLQAELYGVEREVTPSTAYAAKWVSNNPTELVAAIAPRMAANEYGL
                     EIVKENAQDLELNQTRFFVLSRKPVSILLPKEEEKTSISVILPNNMPGALHKVLSTFA
                     WRDIDLSKIESRPLKTSLGEYFFLIDVLSEGKETLVTNALDEITLLGGTANKLGTYHV
                     HRLQTT"
     gene            complement(28890..30179)
                     /gene="obgE"
                     /locus_tag="U0308_000812"
     CDS             complement(28890..30179)
                     /gene="obgE"
                     /locus_tag="U0308_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEM2315800.1"
                     /translation="MFVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADV
                     VFVVDEGLRTLVDFRFKRIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGE
                     IIADLVAHGQRAVIAKAGRGGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLAD
                     VGLVGFPSVGKSTLLSVVSAARPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIE
                     GASQGVGLGHQFLRHIERTRVIVHVIDMSGSEGRVPYEDYMAINNELEQYNLRLMERP
                     QIIVANKMDMPDAEENLNEFKTKIAEDIPVFPISAVTKTGLRELLLAIADKLETTPEF
                     PLNEILEQEDEDTVLYKYVAEEPDFEISREPDGTFVLSGAKIERLFTMTNFERDASIS
                     RFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD"
     gene            complement(30338..31831)
                     /gene="glpK"
                     /locus_tag="U0308_000813"
     CDS             complement(30338..31831)
                     /gene="glpK"
                     /locus_tag="U0308_000813"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HEM2315801.1"
                     /translation="MEKKYILALDQGTTSSRAMIIDEEGEVIGVAQEEFDQIFPKPGW
                     VEHNANEIWASILAVIAGVLLKTNISSKEIAGIGITNQRETTVIWDKESGNPIYNAIV
                     WQSRQTEDICKQLRKDGYEDTIRSKTGLLIDPYFAGTKARWILDHVDGAQERAEKGEL
                     LFGTIDTWLVWKLTGGRAHITDYSNASRTLLYNIYDLEWDDELLKMLNIPKAMLPEVR
                     PSSEVYADTVPYHFFGEEVPVAGIAGDQQAALFGQGCFEKGMAKNTYGTGCFLLMNTG
                     EKAVRSENGLLTTLAWGIDGKVEYALEGSIFVAGSAIQWLRDGLRMVRQSSDSENYAS
                     RIESSDGVYVVPAFVGLGAPYWDSDVRGAVFGLTRGTEKEQFIRATLESLAYQTRDVL
                     YAMEQDSGISLKTLRVDGGASANNFLMQFQSDILGVPVERPENKETTVLGAAFLAGLA
                     VGVWKDKNEIKKHWKLDKRFEVEMKDEQREDLYEGWHKAVKAAQAFK"
     gene            complement(31906..32724)
                     /locus_tag="U0308_000814"
     CDS             complement(31906..32724)
                     /locus_tag="U0308_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HEM2315802.1"
                     /translation="MIDTSLATQFLGEVIGTAILIILGAGVVAGVSLKRSKAENGGWV
                     VITLAWGLGVTMGVYVSGYMSMAHLNPAVTIGMALAGAFPWNYVLPYILAQFIGAFIG
                     ATLIWLHYYPHWKQTEDKPTKLGVFATAPAIRHFTSNFFGEALGTFILVFGLLSLGAN
                     SFSDGLNPLVVGALIVAIGMSLGGTTGYAINPARDLGPRIAHFVWPISGKGGSDWGYS
                     WVPVIGPIMGGALGALGYNAIINGELGMWFWVFAVLFVLILILTMQLDKKKDLA"
     gene            complement(33090..33380)
                     /gene="rpmA"
                     /locus_tag="U0308_000815"
     CDS             complement(33090..33380)
                     /gene="rpmA"
                     /locus_tag="U0308_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEM2315803.1"
                     /translation="MLKFDIQHFAHKKGGGSTSNGRDSESKRLGAKRADGQFVTGGSI
                     LYRQRGTKIYPGTNVGRGGDDTLFAKTDGVVRFERMGRDKKKVSVYPEVQEA"
     gene            complement(33394..33711)
                     /locus_tag="U0308_000816"
     CDS             complement(33394..33711)
                     /locus_tag="U0308_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal-processing cysteine protease Prp"
                     /protein_id="HEM2315804.1"
                     /translation="MIQVDVMREDNQIISFTMSGHADFAEHGSDLVCAGASSIAFGMV
                     NAISEVRDFEPVIEESEGYLYYSVPADYVGDDVVQILLTGMENQLRSLAYSYPDHIKI
                     NSK"
     gene            complement(33730..34038)
                     /gene="rplU"
                     /locus_tag="U0308_000817"
     CDS             complement(33730..34038)
                     /gene="rplU"
                     /locus_tag="U0308_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEM2315805.1"
                     /translation="MYAIIETGGKQIKVEAGQEIYVEKLAGEVGDVVTFDKVLFVGGD
                     SAKVGVPFVEGATVTAKVEKQGRAKKLTVYKYKPKKNYHKKQGHRQPYTKLTIDAINA
                     "
     misc_feature    complement(34051..34129)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00559"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L21 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00559"
     gene            complement(34195..>35214)
                     /locus_tag="U0308_000818"
     CDS             complement(34195..>35214)
                     /locus_tag="U0308_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HEM2315806.1"
                     /translation="YGKEYISISKRIGDKIRLKKITETMVEENEAVIIRSNAEFATKE
                     QLQQALVQARDKHQTLLKEASKRKKPGLLLSVASGILNSTKQFIQRYAPSEVITDDFE
                     FAKMLEMLWPDKQIIIKKSADLFADLGIKAQIDRLARPVVHLSNGSSLFIEKTEAMWV
                     VDVNSGKFKGTTAKEKTVESVNLKAVPEILRQIRLRNMSGMILVDFIGGMSELGYTAL
                     YEALEIKTREEYITTQVAALSQSGLLQLTRRKKQQSFLETTTMPCPVCYATGHVASKE
                     TLAFELERELSGIMQNEPSNIQIITTEDVLDTFLDLNTLSNAPIDWEVADERVPFYQI
                     GRVEN"
BASE COUNT        10157 a         7629 c         6014 g        11414 t
ORIGIN      
        1 cttctaaatt tccttcttgc atttgtttaa tacctaattg atttttatcc atgttatccc
       61 tcttatcttt cctgattttt tacagatgta ttaagccacg taatgagcgc attcgctact
      121 tgatcagttt gttctggtcc actaatcgtt gcttttccgt ccccatgttg ttcgccatat
      181 gaaccgaact gcgcatgatt tccaccttta atagagacaa aggtagtatc tttaggtaag
      241 tattttttat ttttattata agaatcttgg tttaacactt catccttagt cgctgtgaca
      301 gaaagcgctg gaaaagaagc attttttaag gaacctttct tatctgggta actagctaag
      361 aaaaacgcgc cttctatttc gctttcgtta tcatgtgcaa atctagaaga catcacgcca
      421 ccaagcgagt gtccaccaat gacaaatttt tcatccggag cctcatcaat aatatcagca
      481 gctcgatttt taccaaatac agctaaatta aggggcattt caacgatgta cgttttgtaa
      541 ccgctcgaag ctagtttgtt tgcaagaggt gcataactta acgcatcaac aaaagcacct
      601 ggatataaaa taacactcat atcggcatcc aatttacgcg gagtaaaaac aaggatgtca
      661 ttttcttcaa gcacatccac tgctttagtt gaatttgcag cattttctgc agttgtagac
      721 ggttctgagt tgaaataaaa atatccccaa ataagaagac aaaataaaac aatcgcactc
      781 ccaaaaatcg ctatcttttt cataaaggac ctcttttccc tgtttcgtat aatattttac
      841 cataaaatct gtttaaaaaa acgcatttaa acaagaaaaa aaccggagtc tcgtagaaaa
      901 caagattctc cggttccagt tttagcctac ataatctaac ttcgcgccgt ttttccaaac
      961 cgtatcgatt gttccaccgc caaggcaaat gtccccgtcg taaaatacaa ccgcttgacc
     1021 tggtgtgatt gctcgaactg gatcagcgaa aactacttct gctgtcccat cttcgcgcaa
     1081 gtgcacggtt actttcgtat cagtttgacg atagcggaat ttggcagtac attcgattgt
     1141 tttcggtttt tctgcattcg ttgtgaaaga aatatctgtc gcaattaacg aatctgaata
     1201 tagtgtttca tgatggaaac cttgttccac aaacaataca ttttctttta agtctttacc
     1261 aacaacaaac caaggttcac cgtctccacc aatacctaaa ccatggcgtt gaccgatcgt
     1321 gtaatacatc aagccgtcat gtttccctaa cacttcaccg ttcagtgttc tcatttcacc
     1381 aggttgcgcc ggaagatatt cacttaaaaa ttgcttaaag tttctttcgc caatgaaaca
     1441 aatcccagtg ctatcttttt tgtttgcagt agcaagtccg gcttttttcg caatttcgcg
     1501 cacttctgtt ttttccatgc caccaagggg aaacatcact tttttcagtt gatcttgtga
     1561 aagttggttt aaaaagtacg tttgatcttt attattatcg acacctcgaa gtaattcaat
     1621 ttcatcgccg acttttttca cttgtgcgta gtgaccagtt gccacatagt ccgcaccaag
     1681 actttccgca tgttctaaaa atgccttaaa tttaatttct ttattacaca taacgtctgg
     1741 gtttggcgtg cgaccgagct tgtattcatc taaaaaatac gtaaacactt tatcccaata
     1801 ctctttttca aaattgaccg cataataagg aataccgatt tgattggcta cgcgaatcac
     1861 atcatcataa tcctccgttg ctgtacaaac gccaaattcg tccgtatcat cccaattttt
     1921 cataaagatg ccaataacat cataaccttg ttcttttaat atatgagcag tgactgatga
     1981 atctactccg cctgacatgc cgacaactac acgaatgtca ctattatttg tactcaaagt
     2041 tcgctcctca ccttcttata ttttcattaa acgcgttact acttcactaa ttttcgtagc
     2101 cgccatttcc acttcttcta aatggtttcc tagtccaaaa ctaatccgaa cggtctcttg
     2161 aatcgctggg tgattttcac caaaaagagc tactaataca tgcgatggat ctactgttcc
     2221 cgccgtacaa gccgaaccac tagaaactgc aattccgtcc atatctaaat tcattaataa
     2281 ttgttcaatc gaaactcctg gaaaacgcac actaaataca tgtggcaagg tattggcttc
     2341 taatccattc acttcaaaat caagatctgc cgaacgccaa atttctgcca ttcgtttttt
     2401 gaaggaaata tattcctcat tttttagctc tcgttcattc atcatgatag aagaagcagc
     2461 actaaaacca cagattcccg ctagattctc cgttccagcg cgacgttttc gttcttgttc
     2521 tccgccgtgc atttggtaga taagccgtgt gccatttttg acgtataaaa aacctacgcc
     2581 acgtggtcca tttattttat gagaagaagt agttaataaa tcaaccccta gctccgttac
     2641 atttatattt aatagcccat aagcttgtac tgcatctgta tgaaaaattg cttgatgatt
     2701 gcgcaacact gcaccaatct ccgcaatcgg ttgaatcgtg cctatctcat tatttccata
     2761 cataatagaa actagaattg tatctggacg caaggcctct tgtaaactct ctatagatac
     2821 tattccatgc tcatctactg gcaaataggt aacttcaaat ccttgcgttt caaggtattc
     2881 acatgttttt aagacagcgt gatgctcaat ttgagaagta ataatatgtt taccactttc
     2941 ttgctgtgct aaagctgctc caataatcgc caagttatcg ccttctgttc caccacttgt
     3001 aaaaattatt tctttttcta tagcatggat actatctgca attgtatgac gagcttcatc
     3061 caaagctttt cttgcctctc gtccagcgta atggatactg gaaggattgc cgtacgtatt
     3121 tgtaattgcg ccaagcattg tttggataac ttctggatga attggacttg tcgcagcatg
     3181 gtctaagtat attctatttt ccatttttta tcgcgtcctt ttttgtagac gaattcctgt
     3241 tcgccgttaa tcgtttctta ttgtaacagc aatactcctg taaagtaaag aggaataact
     3301 cctatttaca cgcaaaaaag aaaccccaat cgtaccgttt aggattccct tcctttgaac
     3361 ccgctatcaa ttaaagcagg tgggtgctct gtctaacggt ttgcacttcc tcgtgtgaag
     3421 gcatgtgcgc cgcgccggaa ctccaagctc cctaggtata aaaaattgtt cggttcaaaa
     3481 atattaggaa ctatatcgaa tacattaggg tttcttttct tcatttagaa taccatagaa
     3541 aagacgaaat ttcaatgtta gcgacttttc atttggcact ttttttattc tttttttgct
     3601 ttattttcgt taattttttg atacacacca gcaattgtct gctcaaattt agaagtgaat
     3661 ttcggcgcat aatacaattt gtttttaaga cgatctggta aatattgttg atccacccaa
     3721 gcgttatcat aattatgtgg atatttataa tcaatcgctc gtccaagttt ttctgcacca
     3781 gaataatgtc catctcgcaa atgatctggc acttctccac tttttccttg gcgaatatct
     3841 gctagtgccg catcaatcgc cataatagca gaattggatt taggcgaaag gcaaagctcg
     3901 atgacagcat tggcgagcgg aattctcgct tcaggaaacc cgactttttc tgcggtttga
     3961 atggctgcga gtgtatgcgc cccggcctgt ggactcgcaa gaccaatatc ctcatatgcc
     4021 ataacgagca ttctccggct aatactgact aaatctcccg cctcaattaa acgtcccata
     4081 taatggagtg ccgcattcac atcgctacca cgaaccgatt tttgaaaagc acttaataca
     4141 tcataatggg catcgccgtc tttgtcatgg gctaaacttt tcttttgtaa acactcctct
     4201 gccacatcga gcgtaatatg aatcacacca tcctcatttg gttcagaaga aatgacagct
     4261 aactctaagg cattcagcgc acttcgcaca tcgccgttac tcgccgttgc aaaatgtttt
     4321 ttcgcaacct catctatttc tacatcataa ttcccaagcc cgcgttcttt atctgaaagc
     4381 gcccggtcca ttgttatcat aatatcttct accgttagag gttttaactc aaaaatttgc
     4441 gttcggcttc gaatagccgg attaatcgcg atataaggat tacttgtcgt tgcacctatt
     4501 aagataatcg cgccactttc aagtaatggt aataaaaaat cttgtttcgc tttatccaac
     4561 cgatgtactt catctaaaag aagaataacc gtgccgctca ttttcgcctc ggctgctaca
     4621 acttccatat cttttttatt attggtaact gcatttaatg tacggaatgc atattttgta
     4681 cttccagcaa tcgcacttgc aatcgaggtt tttccaattc cgggcggccc gtataatatc
     4741 atagaagata attgttttgc tttgaccatc cgataaataa ttttatcttt accgactaaa
     4801 tgcgtttgtc ccacgatttc atctagtgct ttcgggcgca tccggtaagc taaaggttga
     4861 attgccatat aaccgctcct tcttatttgc ttgtttacta ttataacata agaacatctg
     4921 tgcgttcacc cacttgtttc ctttgccttc tttctgtaat tccgatataa tagatgcggt
     4981 ataagcggtt ttgaaattac tggaggttaa ataaaaatga agattacaac aaaaggtcgc
     5041 tatggcctaa caataacact tgaactcgca aaaagaattg gtgatggccc aatttctctt
     5101 cgtagtatcg cccaagataa aaatttatcg gaacattatt tagagcagtt aatcggtccc
     5161 cttcgtaatg caggaattgt taaaagtatc cgcggggctc atggtggcta cgttttgaac
     5221 ggcgatcctg aaaaaattac tgcaggtgac atcatccgca cactggaagg cccgattgta
     5281 cttgtcgaaa gtatggaaga tgaagaagct gctcagcgtg aattatggac acgaatgcgc
     5341 aatgctgtcc gtgacgtgtt agatcaaaca acacttgctg acttattaaa acattctacg
     5401 gatgctgaac tatcggatgg ttacatgttt tatatttaat gaaaaaagcc tattttcgaa
     5461 taggcttttt atctgccatc gaaacggaaa atacagtcta ttattatctg attattccga
     5521 aataaacatc aaaagcaaac aattgaaacc gttttatgtt agataatcta accaaattta
     5581 ttgaattgat aaaatattct tgcctttatt aaaatatagt gtattataaa cgcataaata
     5641 atatattaca tgttagttta tctaacaaaa aggagagttg agtatggaat cagtatttat
     5701 gttcttttgt actttattgg tttggttaat gacaccaggt attgcattat tttacggtgg
     5761 gatggttcga cgcaaaaatg tgttgagtac ggccatgtat agttttagtt cgatggcaat
     5821 tgtatctatc ctttgggtga tagttgggta ttcattagct ttcgcccctg gaaacggctt
     5881 tataggaagt tttgactgga ccttcctcca taatgttggc ttcgcagcaa acgatactta
     5941 ctcagatgct attccacata ttctattcat gatgtttcaa atgactttcg caattttgac
     6001 tgtagctatc atttctgggg catttgcaga aagaatgaat ttctccgctt atttgatttt
     6061 cattatctta tggtcgttac ttgtttattc ccctgttgct cactgggttt ggggtgacgg
     6121 tggttggtta cgtaatctcg gcgcacttga tttcgccggt gggaatgttg ttcatattag
     6181 ttcaggtgta acaggattag tccttgcaat tatgattgga cgtagaaaag aagccgattc
     6241 tgcttcacct cataatttac ctttagcgct tattggtggt attctagttt ggtttggttg
     6301 gtatggtttt aatgttggta gcgcccttac aattgataat gtggctatga tagcttttgt
     6361 taatacgaat acagctgctg ctgcaggtat tatcggttgg ggtttggttg aatggttgac
     6421 gaataaaaag ccaactatgc ttggaaccat ttccggagca attgctggtt tagtatccat
     6481 tacccctgcc gctggatttg ttaccgttcc aagttcactt atcattggtt tcctcggcgg
     6541 agcactatgc ttctgggctg tgttctggtt gaaaggaaaa gtaaaatatg atgatgcact
     6601 tgatgcattc ggacttcatg gaatcggagg tatttggggt ggtatcgcaa ccggcctttt
     6661 cgccacaaca aaagtaaatg aagctggagc agacggatta ttctacggca atgcttctct
     6721 cgtagtaaaa caattaatcg ccattggttc aacggtagca tatgtggcta tagcgacagc
     6781 aataatcgtc gtaattatca aactattttt accaatccgt gtaaacgaag aacaagaata
     6841 taaaggactt gatttgacgc tgcacggcga aaaagcatat caagaataaa ggaggcaaca
     6901 atatgtctgg attaacaaaa atcgaaatca ttactcgccc aaaccgcttt cacttgtttc
     6961 aaaaagagct tgcgaaaatc ggcgtgagcg gcttaactgt cacaaaagca ctcggtacag
     7021 ggttagaaaa aggatttatc gaactttatc gcggtacaaa aaaagaaagc aatattcatg
     7081 aacgaatgaa aattgaaatc gttgtttcca ctgtcccggt tgaggatgta cttcgtgtcg
     7141 ttaaagaaac gctacgtact ggcgaacccg gcgacggaaa agtatttatt tacccacttg
     7201 cagaagtcgt taaaatcagc actggcgaaa ccggaatcga cgcattacaa gataaaccat
     7261 caaaatgaat agttaaaatg gtgaattaat taaaaatggg gcctctattc taaaaaatca
     7321 atgagaaatg gcgtttaccc cttccgcttc ttagctttta cacttataat gaaaaaggaa
     7381 gaacgtttag aacagataag gaggcgcgaa attccctatg cgtaaaatcc ccattttcac
     7441 cgttctagta gctatcctgc tttttggcgg ttattatctt tatcaacacg cttcgtcaaa
     7501 agtagacgtt acctttaatt tcgtggtgga ccaaaaatca aaaaacaata ccatcactgg
     7561 caaaattgat ggcgctggaa acaaatcaat tacactacca ctttctgaag agagttggga
     7621 tgcagtaaaa aaagggaatc gctacaatgt ggaagccact ttttataata aaaataaaat
     7681 cagctccagt gaagcgaaag aattggacgg cccattctgg tccaatgatt ccaatcgagg
     7741 gttattagtt aataaagtac acgttgaaaa cattcaagaa ttaagtgatg atttttaaaa
     7801 cgaaaagaag gtgagcattt gcgctcacct tcttttttta gtttgtttct tttttcactg
     7861 tctcgagttt caactctgct agctgtgctt cactcacttc acctggtgca tttgttagcg
     7921 gatccactgc actacctgtt ttagggaatg ctattgtgtc acgcaagtta tttcggccag
     7981 ctaagatcat aacgatacga tctaatccaa gcgcgatacc accatgaggc ggtgtaccat
     8041 attctaacgc atccattagg aagccaaatt gttctttcgc tgattcatcc gtaaagccaa
     8101 gtgcacggaa catcgattct tgcacttctt ttttataaat ccgtaatgaa cctccgccga
     8161 tttcatatcc atttaatacg atatcataag cttctgccat tactttagaa gagtccgttt
     8221 caagaagtgg aatatcttct tcttttggta aagtgaatgg atgatgcgca gatacatagc
     8281 gccctgcttc ttcatcatat tcaaataacg gccaatcagt cacccataag aaagcaagtt
     8341 cttcttcatt gattaagttt aactctttac caagtttatt acgaagcgcc cccagtgatg
     8401 ctgcaacgat atctgcttta tcagctgcaa atagtaataa atcgccatct tctgcttgta
     8461 gagatgcttt tagttctgtt gctttttctt cagggaagaa tttagcaatc gggcctttca
     8521 gttcaccagc ctctactttt aaccaagcaa gaccttttgc cccgtagtta gcaacaaaaa
     8581 cacctagtgc atctaaatct ttgcgtgaaa aattagctgc ggctgctttt gcattgattg
     8641 ctttcacttc tccaccattt tcgattgcgg attggaaaac tttaaaatca acatctttta
     8701 cgacatcgga tacattttgt aattctaaac caaaacgaat atccggttta tcactgccaa
     8761 aacgatccat tgcttcttta tatgtcatac gaggaaacgg tttgtcgata gtaatatttt
     8821 tcgcttcttt cactacatct actaacatat cttccgtaat cgcttggatt tcttctttcg
     8881 ttaaaaagct agtctctaaa tcgatttgtg taaattcagg ttgacggtca ccgcgcaaat
     8941 cctcatcgcg gaagcaacgt acgatttggt aatatttatc aaacccagca gtcattagta
     9001 actgttttaa aatttgcgga gattgtggca atgcatagaa gttaccaggg taaacacgac
     9061 ttggtacaag ataatcgcgt gcaccttctg gcgtactttt cgttaaataa ggtgtttcaa
     9121 tatcaaagaa tccgagtgca tccagcttat tgcggaacgt tctcgttacc gtgtgacgca
     9181 ttttgaaaat gttgttcatt tccgggcgtc gtaagtctaa ataacggtat ttcaaacgca
     9241 attcatccga aacattcaca ccatcttcaa tataaaatgg tggtgtttta gacgaattta
     9301 aaatggtaat ttcttctgct aaaacttcta ctttaccagt tgctaatttt tcattgatag
     9361 ctttttcacc acgagcatgg actgtccctt taatagtaac aacaaattca tttcgaacac
     9421 tatcagcgat ttcaagcgct tctttcgaaa attcaggatt gaaaacaact tggacaattc
     9481 cttcgcgatc acgtaaatca ataaaaatta aaccacctaa gtcgcgtctt ttttgcaccc
     9541 acccatgaag gacaacactt tgaccaatat gcgcttcgtt taattcaccg cagtaacttg
     9601 tacgtttttc cattttaatt ctcccccttg gtgtttatta atttttctag tatagttgtt
     9661 tcagacacag cttcttgctc gcctgtttcc atatttttca attgataatt gcctgtttgt
     9721 aattcttctt caccaagaat aatggtatat acggcatttt ttctattggc gtcttttagt
     9781 tgtgctttga atttacgttt taagtaatct ttttctgcac taatgccgtt ttgtcttaat
     9841 ttatttacga gtgttacggc ttttagttct gcttccggtt gcgctgtaat cacataaacc
     9901 tctaacggtt ttttcgcagg tattttgatg tccgcttttt ctagcgccag taaaatacgt
     9961 tccacaccaa taccaaagcc cattcctggt gtatctgggc caccaaactc tctcactaaa
    10021 ccgtgatatc ttccgccacc acaaagcgtt gttttcgcgc caaatccttc ttctacgctc
    10081 ataatttcaa atgtcgtatg gttataataa tctaaaccac gaaccatcgt tgaatcaatt
    10141 tcaaacggaa tctctagcgc atttaagtat ttttttacat tttcaaaata ggcaacagat
    10201 tcttcattta aaaagtccag aatagatggt gccgattgaa ttagtggatt gtcatgatct
    10261 tttttacagt ctaaaatacg cagtggattt ttgtgtaacc gcacttggca ttccgcacaa
    10321 aattcatcaa tatgtggttc aaaatgcgca accagggctt cccggtgttt tagacgactt
    10381 tctttatcac caagactatt aatgaccaat ttaatattta ttagaccaat ttttctgaaa
    10441 aactccattg ctagtgaaat tacttctaca tcaatagaag gatcatcact tccaagcgcc
    10501 tcaatgccca tttgagtaaa ctggcgttgt cttccgcctt gtggacgttc ataacgaaac
    10561 attggctcat tataatacat tttgattggt tggcttactt cgccgtataa tttatgctca
    10621 acaaaagcac gaacaacaga agcggtcccc tctggtctca gcgttaaact tctgccaccc
    10681 ttatcttgga aagtgtacat ttcttttgat acgatatcgg tggaatcacc aaccccgcgt
    10741 tcaaataatt ctgtatgttc aaaaacaggt gttctaattt cttcatattg atagttctca
    10801 cacacttttt taaactctgt ctctaaaaaa tgccatttac taacctcttc tggcaaaata
    10861 tctcgtgtcc ctctcggtaa ttgcaaatcc atcaccataa gcctcctttt tcacttcaaa
    10921 atataaagaa aaacccccgt cacttgttat aaaaaacaag ggacgagagt ttgtttacac
    10981 ccgtggtacc accctaatta gaactactaa tgagtcctca cttaagtcag ttaacgcctg
    11041 aatacgttct tgcttactgt tttcaacaag aaacctcgag agtgtctttt cagaaaatgt
    11101 gactatcttt atcctttcag ccaaatggga taaattctct gtatagcatg gatttcctta
    11161 cttttctctg tcgctagttt taaatatgaa ttattctaag attactaaaa acacactgaa
    11221 aagtcaacat tttgccagtt tttttataaa aaaccacttt ctagttccat gaaagcgcat
    11281 tttatggtaa cattttactg tcagataaaa gtttatgagt atatgggtgg tgttagcttt
    11341 aaatgaagaa taaattcatt tttatcaccg ttgtctccat tttattgatt gcagcaggta
    11401 tttttacaac catagcaatg gcgaacgcga attccgtagt cgtcaaagca gaagtcttga
    11461 atgtccgcag cggtcctggt ttagcatatg atgtaacgag ccaagccaga aaaaatgaag
    11521 tactccgggt agtcggtgaa gaaaatcaat ggtacaaagt tcagttagat aacggaaata
    11581 gcggttgggt tgcaagctgg ttagtagaaa acactgatgt cagcgcagca agtaacagtg
    11641 tcgctatcgt ttcttctgac ggcggtttga atgtacgtga aaaaccaagt acctcaagta
    11701 aagcacttgg attgctaaat aatggtgatc aagtaacagt tactagccaa caaaacggct
    11761 gggcgcaaat ccaatataac ggtacaagcg catgggttag ctccgattac ttaacgattc
    11821 gtgaatctgt tacaaaagta gatgaaagcg agctacaaac agtaaccatt cgcgatgact
    11881 ccactaatat tagaaataag ccaagtcgtg atggcgccgt catcgaaaaa gcaaattctg
    11941 gtcaagggtt cgctattcaa ggagtacaag gtgactggta taagatacgt acgacaagcg
    12001 gcgaagaagg ttatgtagct aactgggtag tcgatgtttc tgacaaaggt caaacatcca
    12061 gccctcgaag caaaacaacc aaattatccg aagcaaccat cgttattgac cccggacacg
    12121 gtggcaacga tccgggcgct aaagggtcaa atggcacaat tgaaaaagaa atgactttga
    12181 agacagcaaa acaattaaaa caaaaattag aagctagagg cgctaaagta atcctaacga
    12241 gaaacagtga taaatatgtc tctctaaaag gaagaacaaa tatagctgcc gaaaataatg
    12301 cagatgtgtt tattagtatt cactttgata gcttagaaga cgcgagcaaa ggggtaagcg
    12361 ggcaaacaac ttattattat gataatagtg ataaatcgct tgctgaaagt attaatacta
    12421 cgctcgggaa agacctccct actactaatc gtggtgcaag agtcggcgat tattatgtag
    12481 tcagagaaaa ttctcaacca gcagtccttc tagaacttgg ttatctaagt tctgcaaaag
    12541 atgaaagtaa tatcaactca gcatcataca gaagccaaat cgctgaatca gtaacagatg
    12601 ggctatctaa ttacttctct aattaaaaaa aacaatcatt caggagactg aatgattgtt
    12661 tttttattta cgcatttcat ctgaatcgag cattattgtt actggaccgt gattgacaat
    12721 tttcacatcc atcattgcgc caaatactcc agtttcaaca ataaaacccg cttctgtaag
    12781 tttttgatta aataagtcat acagtgtttc tgctttttct gctggggcgg attttgtaaa
    12841 gcttggacgt tttcctctac ttacatcagc gtataaagcg aactgggaaa cgctaagaat
    12901 cgcgccgcct cgttctgcta aagaaatatt catcttctcg gattcatctt caaaaattcg
    12961 taatccaacg attttttttg ccatatagtc cacggtttct ggggtatctt tatgggtgaa
    13021 tccaactaat aaacaaagac ctccagctat ttcgctaatg acttcctcct ccacactcac
    13081 ggaagcttca taacaccgtt gcagtagtac acgcatcgct tctccactcc tttagttcat
    13141 taatcttctc actgtataaa catctggaat ttgttttatt ttatccacta cgcgttgtaa
    13201 atgattaata ttatgaatct gtagcgtgac cactaatgtt gccatcttgt tgttatcaac
    13261 cttagcattg acgccgttaa tattggaagt tagactgtta atcacttgta gaatatcatt
    13321 tagcaaaccg ttacgattat agccataaat ttcgatgtct acattatagt catttttcgc
    13381 ttgtgaatca gcatcttccc agtccacttc gatcagccgc tctggttcaa tagcttgaac
    13441 atttgggcaa tcttgacgat gtatagaaat gcctcgacct tttgtaatat aaccaacgat
    13501 agcatcacca ggcactggat tacaacatct ggatagtcga atcaatagat tacctactcc
    13561 ttgaacaact actcctgcat tatgcttaat cttcagtttc tcattgttag catctgaatt
    13621 cgaaggttta ttttctgatt gcgtcaataa cttctctgtt tctgcttcta attcacgttc
    13681 ttttcgaagt ttttctgtta agcggttagc tacttgtaaa gctgtaatgc cattataacc
    13741 aacagctgca aacaaatcat cttcatgcga aaaatttagt ttatcagcta atttacgaag
    13801 attttctggc gtcataattt ttttcgattc gaatccaagt tgtctaattt ctttctcaac
    13861 taaatcgcga cctttttcga cattctcttc ttttgcttgt cgtttgaaaa attgtttaat
    13921 tttatttcgc gcttgcgaag tttgaactaa tttaagccag tcgcgacttg ggccgtaaga
    13981 atgtttggac gttaaaatat caataatatc gcccgttttt aatttatagt cgagtgtcac
    14041 aatttttccg ttaattttag ccccgattgt tttgtttccg atttcggtat ggacacggta
    14101 agcaaaatcg agtggtacag agccatttgg taactcgtac acatcgcctt ttggagtaaa
    14161 tacgtaaaca acatccgaaa ataagtcgag tttcaagctt tccataaact cttccgcatt
    14221 atccgattca ttttgatatt ctaaaatttc tcggaaccat gttaatttat tatcgaatga
    14281 agttttggaa ttaaccactt tgccttcttt ataggcccag tgtgccgcaa ccccgtattc
    14341 agcgatttgg tgcatttcgt gcgttctaat ttgaacttca agcggttctc cttgaggccc
    14401 tataaccgtc gtgtgaatcg attgatacat attcgacttc ggcatcgcaa tataatcttt
    14461 aaagcgacct ggcatcggtt tccagcgcgt atgaataata ccaagaacag catagcaatc
    14521 cttgatacta ctaacgacaa ttcgaacagc caacaaatca taaatttcgt taaattgttt
    14581 attttgttcg ctcattttcc ggtaaatcga ataaatatgt tttggtcttc cagaaatatc
    14641 cgcttgaata ttgagttcat ctagattttc attcacaccg tcaatcacat catgcaaata
    14701 acgctctctt gcatcccgct tttgtttcat taagtggacg atgcgataat attgttgtgg
    14761 atttaaataa cgcagcgctg tatcttccag ctcccatttc actcgcgaaa tacccaagcg
    14821 atgtgcaagt ggcgcaaaaa tttctaatgt ttcgttcgca attctacgtt gtttttccac
    14881 gggcaaatgt tttaatgtcc gcatattatg caaacggtcc gccagtttga ttaaaataac
    14941 gcgaatatcc tgcgccatcg caatgaacat tttccgatga ttttcagctt gttgctcttc
    15001 gtgtgattta tatttaattt taccaagttt cgttactccg tctactagca tggcaacttc
    15061 actgccaaaa acttcttcta aatccgctag tgtgactggc gtatcttcca cgacatcatg
    15121 taaaaatcca gatgcaacgg tcgatggatc catttttaat tcgactaaaa tgccggcaac
    15181 ttgaattgga tgaataatat acggctcacc tgatttacga aattgctctt tatgagaatc
    15241 gcgcgcaaat tcatacgctt tttttacgag cgctagatgt tcctgattca tataatgaga
    15301 agccatatcg atgacctgct cagctgtcag attttgttct ttcgccattt acattcaccc
    15361 tcttatctcc atgtcatata tacaacttaa aaacacccaa aaactgagtg ttctaaaaaa
    15421 tattcttgtt taatattata gcatgagccg tctttgttta gaaagcactt ttccttgatt
    15481 tttcacattt tctggcagtt ttcagctttt taatcaaaaa actaccccta aaataatagg
    15541 agtagtttga tttttataat tgcataagga ttaaacggtc gtaaccattt aattttttat
    15601 gtccttctag ctcttttagt tcgattaaga aagcacaacc agcaacaata ccgcctaatt
    15661 cttctacaag tttgatagtt gcttcgattg ttccaccagt tgcaagtaaa tcatctgtaa
    15721 ttaaaacgcg ttgccccggt ttaatcgcat cactatgcat agataattta ttcgtaccat
    15781 attctaaatc gtattccatt tcgattgttt cacgaggaag ttttcctggt ttacgaacag
    15841 gcgcaaaacc aattcctaac gcataagcaa ctgggcagcc aataataaag ccacgtgctt
    15901 ctggtccaac aataatatca atttttaatt cttttgcgta ttccacaatt ttatctgtag
    15961 caaaacgata tgcttctccg tcattcataa ggggtgtgat gtctttaaat acaatccctt
    16021 ttttgggcca atcgttcaca atcgctacat aatcttgtaa atctttaatt tccattttct
    16081 agttcctccg cattcgggta aattgatgtt tccatcattg attccatcca actatgaagt
    16141 tccgtatagt tagagtacaa cagttttttt cttgtagtta tttcttctac cttttgttga
    16201 taaacaagtg attcgtccag attacgtttt tcaacaactt cattaataat aatctgacca
    16261 ctttccattt tagcaaattc taaatcaaaa aacacctttg acatgaaatc tatttgctct
    16321 ttattccagc caaacttttg cattagccgt ggtgtgtact ttttaattgg aaatggttgg
    16381 aattttttga tgagactata cagctcagca aaggctaacc ggtctggaat tgctggaatt
    16441 tgattcccct ctgctgcatc aaaatggaca aaaatacgct ctggtttcgt ttcacgaaca
    16501 atcgtttcca ctaattcagt cttcgttggc atatccgcaa aaacaagttc ttctgtctgg
    16561 aaatccgccg taaaatcagc tttttcatcc actaaaatat agtttttttc tccaagcgtg
    16621 ccaatcgttc tttcttcaaa acaaacaaaa actcttgatt ctgtttgttc ttggagaatc
    16681 ctagcccact cagatttatt acgtacatcg aaaagttgcc aatgcgagat gtgaatgtcc
    16741 atcatgcgta gttgtggttt tttcacatta ttccattcat tgatggataa ttccccaacc
    16801 acgtccacgg ctgcatttgg agaaattttt tctaccaaat cgcctacacc aaatccgata
    16861 gaatctaaag tggcatcatt ttcctctgta gcaagcattg tttttaaatg ggttttatct
    16921 gccccaattc ttttcgttcc ttttaaatgc atattttcta acaagaaaat tggtttaggg
    16981 ttatccattc caaaaggagc taatttttca agttgagcaa taaatgctac ggaaacatcc
    17041 gcaatattta ttttctcttc tattttcaag gctgggcgga aatcttcttc agaaagaaaa
    17101 ctcgcttctt cttgtaattt agcttctaat tctgttagat tttcagcggg caatgtaaga
    17161 cccgcagcca ttggatgccc accaaatgca gtcattaaat cacgatgttt atcaagcgct
    17221 tgatacaaat gaaatgcatc gacgcttcga ccagatcctt tggcaattcc agtaactgga
    17281 tcaattccta gtacaatcgc cggacgagaa tatgttccaa ctaatttaga agcaactatc
    17341 cctaaaatcc ctgtattcca accctctccg taaacaacga gcacatttcc taatgtttct
    17401 tttgcctcaa ttgcctccat cgcgagcttc gttgtatcaa caactatttg tttacgttct
    17461 ttattcgcat catcaatttc ttctgctaag aaaagtgctt cttctggatc ctctgttaaa
    17521 agtaaatccg ccgctggatc tgctgggcct aaacgaccaa cagcattcag tcgtggagct
    17581 aaaccaaagc caatagtttc ttccgtagcc tcttctaact tcaaactagc ttttttagct
    17641 aacactgaaa gtccaaggtt cgcggattcg cgcaattggc gcaatccaag ttggacaagt
    17701 aagcgatttt catctgttaa agaaactaaa tctgccaccg ttccaactgc aactaaatca
    17761 agcaattctt tcggttcttc tccaagtaat gcatgcgata acttataagc aacacccaca
    17821 cccgctaatt catcaaaagg ataagctgac ttaggatgct tcggatgaat tactgcaaca
    17881 gcttccggca taacttcccg tggttcatgg tgatccgtca caataacatc taaaccaatc
    17941 tctttggcat gcgtcattac ttcaagcgcc gcaataccat tatcaaccgt aataattaaa
    18001 tccgttcctt ggtttttagc catatcaaaa gcagtgatat ttggaccata accttccgta
    18061 aaacgattag gaatataaaa ttcagcattt gctcctaaat gccgcagtgt tttcattaaa
    18121 acggcaatac tagtaactcc atctgcatca taatctccgt aaactaaaat ctgctcattt
    18181 agttctatcg ctcgcttaat tctagcaacc gcaagatcca tttcagcaaa taaaaatggg
    18241 tcatagcttt catatttttc tgggtggaaa aatttatcga attgtccttg cgttgtaatt
    18301 tttcttttcc aaagtagttt tgcaagtgga agcgaaattt ttagctgttc tgctaattgg
    18361 cttgctttgt cttccgccgc ttcctcgata ttccataagt attttgaatg aatcacatta
    18421 ccccacctct caaccttcct attatatcga aaatcactag aaaaaccaag aggaatcttc
    18481 taacaaaaaa cgccaacata ttttgtcagc gtcccatttt ttatttagtt gtgtctacca
    18541 cattttctgt atcacgtgtt tctactttag atgaatgagt tttcattgct ttagcagctg
    18601 ctagttggcg ttctaattct gctttttcgg atgttaattg ttttacttgt ttcttcattc
    18661 cacgcgattt cgcgatattt aagaaaaaga taattaaaca accacaaaga acagagccta
    18721 aaataattaa aattaatggc cactccgctt gcgcaaataa aaagtttact tctactggat
    18781 ctacattaat aactgcaaaa atagcaataa tgagtgctaa aataatcccc gcaattactt
    18841 gccactgtac tttattttct ttcatgtttt ttctcctcct tgcacaatta tcttattatt
    18901 tacccgtttc taggctatta aaaacgaccg aatctctttt tatgaaattc ggccgttcgt
    18961 ttttatacga caggttgccc gttattacgt ggttttttct ttttaactgt gctaattggg
    19021 cctttttttc gtagttgtcg tgctttgaat acgtaccaca attgcattgc cataaagatg
    19081 gaggagaata cactcgaaac aagtccaaca agtaaggcga tggagaagtt cagaatagac
    19141 tcactaccaa atagtacaag tgccagtacg gtgaaaataa ccgttaaaat ggtattaatt
    19201 gaacgagtga atgtttggcg taatgcttta ttaaccgcat tcgcaatttc ttctttcgtt
    19261 ttgaaacgtt gcatcttcat actaatatcc cgtatccggt cggcggtgac tatcgtgtca
    19321 ttaatggaat aaccgataac cgtcagcacc gcggcaatga aggttaagtc aacctccagc
    19381 cttgttacac tgaagaatat gaagatgata aatgcgtcga atagtaagga cagaatcgcc
    19441 gcaataccca tataaaattc aaaccggact gcaatataaa gtacaatcag cacagacgcc
    19501 acaccgagtg cccagaagcc atttttggca agttctttac cgacagttgg tgaaacggta
    19561 ctaatgcttg gttcgtgctt atacttgtcc tcaaaatagt ttttaaattt agctacatca
    19621 ttttgtgata atgtcccttt ataagaaaca acggctgttt tagaccctga tccttggaaa
    19681 acaatatcat ccgatggcat attaatcgca tctaaatctt tcttaatttg cgtttctgtc
    19741 agcgtttgat tagctgttac ttccgctcgt gtcccactgg caaagtcaat acctagattt
    19801 agcctaaata tggagagaat aacaataccg acaataacaa ttgcagcaaa aatagataag
    19861 aacagacgat gatgttttac aaaatcaaag cgatcaaagt gtgtttttaa gctaaagcta
    19921 ttaattccct catgtaaatt atgaatatct tttcgtttaa ctgcaaagaa tcctggttta
    19981 ttgttaagcc aattactttt cactaataag cctaataaga atcttgatcc ccaaacggct
    20041 gtcaagaagc tgactaaaat actaatgatt agaaccgtag caaaaccttt gatggagctt
    20101 gttccaaagt agaagagaac cgcagctacg ataagtgtcg tcaagttacc atctaaaatc
    20161 gcacggaatg cttctttacc gccgacctca aaagccgctt tcgtcgacct accgactttg
    20221 atttcttctt ttatccgctc gtaggttatt acgttcgcgt caacagccat acctatcccc
    20281 agaatcaaac ctgcaatccc tggtaaagta agtgttgcgt taagcagact cagtattaat
    20341 agtactaaat aagtgtatgc aactaaagtg atacaagcaa taacgcctgg taaacggtaa
    20401 actgccatca tgaaaataaa gatagcaatg accccaataa taccagctaa aattgtttct
    20461 tgtaacgcat cttgcccaaa ttgagcacca acagatgtcg agtaaacttc tttcatttta
    20521 acagggagtg caccagagtt tagcaaatca gctaaatctt ttgcttcttc cgttgtgaaa
    20581 cttccggaaa tttctacttt atctgtatca agcacgctac taacgtttgg tgctgataag
    20641 taagctgggt ctttcttctc gcgttctgtt ttgtattttt gtccttcttt ccaatctaac
    20701 caaataacta attgattgtc aggcgcttcc gctagtattg tttttgttac actagcaaat
    20761 ttatctgcac tttttagttt tagcgtaacg attgggttgt tgcttgaatc gaaagcttgt
    20821 ttggcaccgc ccgcaactaa gtcactacca ttcatcatca tcttgtcatt tgcatctcta
    20881 aatgataatt gggctgtggt tgatagcatt tttcgtgctt cttcctgatc agttacccca
    20941 gcaagttgaa cacgaatacg gttatcccct tcgatttgaa tacttggttc agctacacct
    21001 aatgaattga tacgcttgtc gagtgaagtt accgtatctg tcaatgtttg tttggataca
    21061 gttcctttgc catcagctgg tgaaacttca tatagaactt cgaatccccc ttgaagatcc
    21121 aagcctaggt tgatgttttg cataaccatt tttgcggtac caaatacagc accaaagata
    21181 attgcaacta ctagaaagaa aataactatc ttactctttt ttaccatttc tgtttcgttc
    21241 ctccctcatc taaaccataa caaatcccag tctaacaaca aatacttcta ttttatgtat
    21301 gaaacccaag catttgctaa caggctgtta atcttccaca tttggttgaa gcatactatc
    21361 tgcttgagaa acatggttat tagattcttg ttcagctgtt gtcataataa attgcattaa
    21421 ttgtccaata ttcatttgca taacatcatt tatacgttca tgcaaagcag gggttggttc
    21481 attcttccac ttttcttctg ttaaaaatgc ccaaatgtgg cttgccttga tttctcggta
    21541 acctaaaata tgaaaatctt ccacttttat tgaaatcgct ggcgctaaat cttcatacca
    21601 ttccgaaaat gtatccatat caagtcgtcc cctttcttaa acaataagca tattcccatt
    21661 ttatctaaaa aaagcttaaa tgggaagtat aagctctatt tttatggtta aaaaatgcca
    21721 tttcaccgtt taaagggaaa tggcattttt atttcaagta ttatttgttg tcttctacaa
    21781 cttcagtgtc atcagaagtt gtttctgcta caactggatt agaaactgca ttaccttttt
    21841 caagtacagt tctgattgcg ttacggtcaa aagttaattt gctgtttccg catttcaaaa
    21901 tgactgtgcc atcttcaatt gcttcaacaa taccgtgaag tccaccaata gtaataattt
    21961 tatcaccttt tgctaaacta ctttgcatat tttgtacttc tttttgacgt ttttgttgag
    22021 gtctgattaa taagaagtaa aacaaaacga tcatcaagat aattggtata aatgttacaa
    22081 taccgcccat attttccaac tcctttcgat actttatata tatttagaaa ttttttgcat
    22141 caggacgatt gaatccatat tgctcaaaaa attcttccct aaaatcagca agacgatctt
    22201 ccataatagc gccacgaact tgcttcatta agtttaacag aaaatgaaga ttatgataag
    22261 ttgtaagtcg aattccaaat gtttcctcac aacgaatcaa gtgtcgaatg tatgcacgtg
    22321 agtaattttt acaagtataa cagtcacaat tttcatcaat tggacggaaa tcatgggtaa
    22381 acttagcatt tttaataact aagcgaccac tagatgtcat acaagtacca tttcgtgcaa
    22441 tacgtgtggg aagaacacag tcaaacatgt ccactcctcg aattacgcca tcaatcaatg
    22501 agtcaggcga acctactccc attagataac gtggtttatt agctggtagt agtggtgtcg
    22561 tgtgttccaa aacgcgattc atcacgtctt ttggttcacc aacagacaat ccaccaattg
    22621 agtatccagg gaaatctaga gataccagat ctttcgcact ttgcgcacgt aaatcttcgt
    22681 aagctccacc ttggacgata ccgaacaaac cttggtcttc tggtctaacg tgcgctttta
    22741 agccacgttc agcccagcga gatgttcttt ctactgattt cttcatatat tcatgcgacg
    22801 ctggatatgg tggacattcg tcaaaactca tcatgatgtc agatccaagc gcattttgaa
    22861 tttgaatcgc tttttctggt gataggaaaa gtttgtctcc gtttaaatgg ttacggaaat
    22921 gaacgccttc ttctttgata tcacgcattt tactcaaact aaacacctga aaaccacctg
    22981 aatccgttaa gattggttga tcccagttca taaatttatg tagtccgccc gcttctcgga
    23041 taagttcttc tccaggacgc aaccataaat gatacgtatt gcttaaaata atacctgcac
    23101 ccatggcttt taattcttcg ggtgacattg tttttaccgt cgcaagcgtg ccaactggca
    23161 taaacatagg tgtatcaaat gtgccgtgcg gtgtatggat tttaccaaga cgagcacctg
    23221 tttgtttatc tgttttaatt agttcataac gaatggcaga catgtgttac ctctttctta
    23281 tttactctat tcactagcat aacgaaaatt accaatgaaa acaagctttt ctattaattt
    23341 tttcgcaatt taatgaataa acatggcatc gccaaaacta aagaagcgat attgttcttc
    23401 tacagcatga ttataggctg ctaaaatttt cgtgcggtcc gataaagcag acacgagcat
    23461 aattaatgtt gattttggta aatggaaatt cgttattagt gcatctactg cctgaaaagt
    23521 ataccctggg gaaatgaaga tctctgtcca acctgattca gccactagtt tgccgtcatg
    23581 acgactcgca attgtttcta atgttcggat agaagtcgtt ccaactgcaa caacttttcc
    23641 gccttgtgct ttgattttat taattcgctc agcagattct tctgttaaac gataaaattc
    23701 agaatgcatt ttatgattgg tagtatcttc tacgtccact gggcggaatg ttccgagccc
    23761 tacatgaagc gtcacgaaaa tgatttctac accttttgcg ctaattttcg ccagtaaatc
    23821 ttctgtaaaa tgaaggcccg ctgtcggcgc tgctgctgaa ccattctctt tcgcatagac
    23881 ggtttgataa cgatcctgat cagcaagttg ttctttaatg tatggtggaa gtggcatctc
    23941 gccaagttgt tctaaaactt cataaaaaat gccttcataa gaaaattcta aaatccgacc
    24001 accatgctcg agctcttcca agcaaatcgc ttttaaagca ccatcaccaa aagtaatggt
    24061 agcacctttt cgaattcttt tggcaggttt tactaaagtt tcccatgcat tgccttcttt
    24121 ttgtttcaaa aggagcactt caatgtgcgc gccagtttca tctttaatac catgcagcct
    24181 tgctgggaga acacgtgtgt catttaatac tagtgcatcc ccttcgttta aatagctgat
    24241 aatatcagtg aaatgttggt cttttatgtc acctgacttt ttatcaagca ccattagccg
    24301 gcttgaagtc cggtctaata gtggggtttg tgcgattaat tcttctggta aatcaaaatc
    24361 gaaatcttct actttcatgc tttatacctc tttttcataa cttattccta aatggttata
    24421 cgccgtttca gttgcgattc ttccgcgcgg cgtcctttgt agaaaaccga tttgtagtaa
    24481 atatggttct tgcatatctt caatggtttc tcgttcttct ccaatacttg cagcgattgt
    24541 atccagtcca actggaccgc ctctaaatga ttggataatt gtgtggagca atttttggtc
    24601 aatggtatct aatcctcttg gatctacttg aagcaaagta agtgcttctt tcgctagctt
    24661 ttctgttacc gttccgtttc ctcgaacttg cgcgaaatca cgtacccgtt ttaataaacg
    24721 attggcaatc cgtggggttc ctcttgaacg tctagctatt tcacgtgcac caagatcatc
    24781 aatctttgta tctaatatat tcgaagttct gagtacaatt tctgttaact gctcttctgt
    24841 ataaaattcc aagtggtcaa ttacgccaaa acgatctctg agtggtgccg ataaaagtcc
    24901 cgctcgtgtg gtagctccaa tcaatgtaaa tggtggtaag tctagacgaa cagagcgcgc
    24961 agttggacct gttccaatca caatatccaa acaataatct tccattgccg gatataaaat
    25021 ttcttcaatc gctctcgata aacgatggat ttcatcaata aataaaacat cccctggctc
    25081 aaggcttgtt aaaattgtcg ccaagtcacc tggtcgttca attgctggtc cactcgttgt
    25141 tttaatttga ctccccattt cagctgcaat aaccattgca agcgttgttt taccaagccc
    25201 tggaggtccg tataaaagca cgtgatccaa ggcttcattc cggagtgtgg cagcttctat
    25261 aaaaactgtt aaattattct ttactttgtc ttgcccaata tattgtgaaa ggttctgtgg
    25321 ccgcaaacta gtttcaaaag atacttcttc tgcgtctacc gtttcacttg aaataattcg
    25381 ttcatccatg ccacaagctc ctctctattt tgtcattaat tgtagtgcta gcttgatata
    25441 tgcgtcgctt gttaggtctt cttcttttga caattttggt attacttttt ttagttctcg
    25501 cgtgctataa ccgagcgctt ctaaagctaa tacagcttct tctaattgcg gagaaagtcc
    25561 agcaaccata tcgttttctg gagcaacata aacaatttcg ctcgcgacaa catcagctag
    25621 tttgcctttc aaatcaagaa tgatttggcg tgctgttttt ttaccaacgc ttggaaattt
    25681 ggttaaataa acatcgtctt cggattcaat agcagaaatc agtggaacga catcgcctga
    25741 agcaataata gctagcgcgc tttttggtcc aatgcccgaa acactcaata attttttgaa
    25801 taaataacgt tcttctgttg tttgaaaacc gaatagagaa atattatcct cccgcacatg
    25861 ttgatacaaa aagacttgtg cttctgtacc ttctaatcgt tgaaaggaaa acgggtttcc
    25921 tgtaattatt tgatagccga tttgtcctgc ctcgacaaca atatattcgg gtgtaatcgt
    25981 cgtaacggtt ccttttatgt aatcgtacaa tttattcgtc ctctcttcat ttcacgtcat
    26041 acattatatg atagcataaa acggaacgtc tgtactagtt tttgtttata aaagaaacgc
    26101 ttatttagtt tacataataa tattattgac accttaaata gattgaatac tttttttaat
    26161 aaccgccaca gaattcgcaa atgcttcttt ttctttctca tctaatttta aagagatgat
    26221 ttcttttaca ccattttgac ttaaaacggc tggaactccg atagctagac cactttctcc
    26281 gtattcgcca tcgagcacac aagacaccgt taaagcacgc tggctcccac taaatatatg
    26341 gcgacaaatc tcgacaatcg taccacctat gccgtattct gtgcagcctt tttggtggta
    26401 gatttcaaaa ccagtatccc gagcagtttc acctatttgt ttcaaatcta gtgcctcgcc
    26461 tagtttttcc acactatatt cattcactgg tttaccataa atagatgaat gggaccacac
    26521 ggggaattga gaatctccgt gctcaccaag gataaaagca tcgatacttt gagcagcaat
    26581 atctagtttt tctgcgagta aacggcgtaa ccttgttgta tcaagccata cccccgttcc
    26641 gagtactcgt tctcttggta aaccggacaa tttccacact tggtatgtga tgatatcaca
    26701 cggattcgtc gcgattaaga aaataccatt aaacccgcct ttcatcatct cgggcacaat
    26761 gcttgaaacg attcttgaag tacttctcag ttcgtctaaa cgagtttgtc cttcttttaa
    26821 aggaccagca gttacagtga ttacagcgat atctacatct gcacaatcgc tcgcatcacg
    26881 aacagtaata tccattttac cgggcataaa tgcagctgca tcagccaagt ctttccgatt
    26941 cccttctaca cgttctttat ttaaatctac aagaattaac tcttccacaa atttttgatt
    27001 aacaaatgcg tgtgctgcag ctgttcctac atttccagct ccaattatca ttactttacg
    27061 cggtttcata ttttcttcct cctagtgatt catataaaac acccctattc aaattgtccg
    27121 aaaaaggggt gtgttgactt aatttatctc tgcgttcgta taaacttctt gcacgtcatc
    27181 atcatcttca agtgcttcta acattttatc aaattgtgtt tgattatttt ctgcaacttc
    27241 attataaacc gttggaaaca tggataattc agcagtagca aaagtgtacc cggcttcttg
    27301 caaagcctct ttcacttccg gaaaagtagc cggatcagta aaaatttcaa atacatcttc
    27361 gcttacttcc acatcatctg cccctgcttc aatagcctcc agcatgaatt cctcttcgtc
    27421 cacatctaaa ccttcgcgta aaataacaag ataaccttta cgatcaaaca tatagctcac
    27481 actaccggtt tcaccaagac ttccaccgtt tttattaaaa gctacacgaa cattggtgct
    27541 cgtacgattt ttattatctg taagcgcatg gacaagaacc gcaattcctc ccggcgcata
    27601 tccttcatag gttacttcat cataattttc gccactcgta ttaccagcag ctttatcaat
    27661 agctcgctta atattatcgt tcggcatgtt gaccgctttt gctttatcca taactaatcg
    27721 gagtgacggg tttaaattcg gatcaggacc ttttttcgct gcaacaaaaa tttctctcgc
    27781 taatttttgg aatactttgg aacgcttgga atcttgtgca ttttttctac cttgaatatt
    27841 attccatttt gaatgtcctg acatatattt cactcctttt agatttagta aagcttttct
    27901 cctacaaatt ctaacgtaaa aagggaggaa tcgcaataaa aaagttaccg caaaaaattg
    27961 cgataactct ttatttaagt cgtttgtaag cggtgaacgt gataagttcc aagtttattt
    28021 gccgttccac ctaaaagtgt tatttcatca agcgcattag ttacgagcgt ttctttccct
    28081 tctgaaagta catcaatcaa gaaaaagtac tcgcctaatg aggttttaag cggtcttgat
    28141 tcgattttac ttaaatcaat atcccgccaa gcaaacgtag ataagacttt atgtaacgca
    28201 cctggcatat tgttaggcaa aataacagaa atagacgttt tttcttcttc ttttggtaat
    28261 aaaattgaaa caggtttacg acttaaaaca aaaaatcttg tttgatttaa ttccaagtct
    28321 tgcgcatttt ctttgacgat ttcaagcccg tactcattcg ccgccatgcg tggtgcaata
    28381 gctgcgacaa gttctgtcgg attattacta acccattttg cagcataggc tgtagaaggt
    28441 gtaacttcac gctctactcc atataattct gcttgaagaa atgtatgaca ctgggcaagt
    28501 gcttgtgggt gggacattac tttttgcact gatttccaag cggatacgtg tgctggatga
    28561 accattaaat gttgcgcaat cgggagaaca atctccgcta ctacagggac acttgaaaaa
    28621 tgaaataagt agtccagcgt gatattgacg cttccttcaa tcgtattttc aattggaaca
    28681 acagccacat ccacgtcttc cttttcaatt gccataatac aatctggaat cgtactctta
    28741 gctatcatct cttcttttgg aaaagccttt gctgctgccg cgtgtgtaaa agatgctgct
    28801 gggcctaaat aagcaatttt cattttcaac tctcctttta tcgtagctag gaaaaaagcg
    28861 tgcgccaact aattggcgca gcactttatt taatccataa attcaaattc ataatcaagc
    28921 aggcgaacga tatcgccgtc tttagcacca cgttttctaa gcgcctcatc gacacccatt
    28981 gcacgaagct gacgagcaaa acgactaata gatgcatcgc gctcgaagtt tgtcatcgtg
    29041 aataagcgtt caatttttgc accacttagt acaaaagtac cgtctggctc tctagagatc
    29101 tcgaagtcag gttcttcagc aacatatttg taaagaactg tatcttcgtc ttcttgttcc
    29161 aaaatttcat taagtggaaa ttctggagtt gtttctaatt tatccgcaat agcaagaagt
    29221 aattcgcgaa gtcccgtttt tgttaccgca gaaattggga ataccggaat atcttcagca
    29281 atttttgttt taaattcgtt taaattttct tctgcatctg gcatatccat tttattagct
    29341 acaataattt gtggacgttc cattaggcgc aagttgtact gttcaagttc attattgata
    29401 gccatatagt cttcgtatgg aacgcgtcct tctgagcccg acatatcaat gacatgcacg
    29461 ataacacgtg ttctttcgat atgacgtaag aattgatgcc ctaaaccaac accttgacta
    29521 gcgccttcaa ttagacccgg taaatcggcc ataacaaagc tacgaccatc tcctgcgtca
    29581 accattccta agtttggaac aatcgtcgta aagtgatacg cagcgatttt tggtctcgca
    29641 gcagaaacaa cagataatag ggttgattta ccgacacttg ggaaaccaac taaaccaaca
    29701 tctgctaaca ctttaagttc taattgcaca tttcgttcct gtccaggttc tccgttttca
    29761 gaaagttctg gagccggatt tgctggtgtt gcaaagcgtt tgttaccacg tccgccacgt
    29821 ccagcttttg caataactgc gcgttgacca tgtgcgacta aatcagcaat aatctcaccc
    29881 gtatcaatat cttttacaat ggttccttgt ggtactttga caactaaatc ttctgcgccg
    29941 cgtccatgca tacttttact catgccatgt tcgccgtgct ctgctttaaa gattcgttta
    30001 aagcggaaat caaccaatgt acgcagacct tcatctacta caaatacaac gtctgctcct
    30061 ttaccaccgt caccgccagc aggaccaccg tttggtacaa atttttcgcg acggaatgct
    30121 accataccgt ccccaccatt accagctttt acatatatct taacctgatc tacaaacata
    30181 atttttatat tctcccgttc cttaaaagtc ttatctttca ttataacgaa taaactatac
    30241 atctgtcact atatttattt ctatttccaa atatttattt gttttacata acaaaaaagc
    30301 gccaaatgct tttacacatt tggcgcatct taaaatttta tttaaaggct tgtgcagctt
    30361 tgacagcttt atgccaacct tcatataaat cttctctttg ttcatctttc atttctactt
    30421 caaaacgttt gtctagtttc caatgttttt taatttcgtt tttgtctttc caaacgccta
    30481 ccgcaagtcc agctaagaat gccgcaccta gaacggttgt ttctttgttt tctggacgtt
    30541 ctaccggaac gcctagaata tcggattgga attgcattaa gaagttatta gcagaagccc
    30601 cgccatccac acgtaacgtt tttaagctaa taccagaatc ttgttccatt gcataaagca
    30661 cgtctcttgt ttgataagca agagattcca atgtcgcacg gataaattgt tctttttcgg
    30721 taccacgagt taatccaaaa acagcaccac gaacatcgga atcccagtaa ggtgcgccta
    30781 aaccaacgaa tgctggtaca acatatacac catcactaga ttcaatccgg ctcgcatagt
    30841 tttcagaatc gcttgattga cgaaccattc gtaacccgtc acgtaaccac tgaatagccg
    30901 aaccagcaac gaatatacta ccttcaagtg catattctac ttttccatca attccccaag
    30961 ctagtgttgt taataagccg ttttcagaac ggactgcttt ttccccagtg ttcattagta
    31021 agaaacaacc agttccataa gtatttttcg ccatcccttt ttcaaaacaa ccttgtccga
    31081 ataaagcggc ttgttggtca ccagcaatac ctgcaaccgg cacttcttca ccaaagaagt
    31141 gataaggcac tgtgtccgca tacacttcag aggaaggacg aacttcaggt aacattgctt
    31201 ttgggatatt aagcattttt agaagttcat catcccactc taaatcgtaa atattataaa
    31261 gaagtgtccg agaagcattg gaataatctg taatatgagc acgaccacca gttaatttcc
    31321 aaactaacca agtatcgatt gttccgaaaa gaagttctcc tttttcagca cgttcttgcg
    31381 caccatctac atggtcgaga atccagcgag cttttgtacc cgcaaaatac ggatcaatca
    31441 aaagaccagt tttagaacga atggtatctt catagccgtc tttacgtaat tgtttacaaa
    31501 tatcttctgt ttgacgagat tgccaaacaa tcgcattata aattggattt ccgctttctt
    31561 tatcccaaat aacagtagtt tcacgttggt ttgtaatacc aatcccagca atttctttag
    31621 aagaaatatt tgttttgagt aatacgcctg caataacagc taaaatcgaa gcccagattt
    31681 cattggcatt atgttcaacc caacctggtt taggaaaaat ttgatcaaat tcttcttgtg
    31741 caacgccaat tacttctcct tcttcgtcaa taatcatcgc tcttgaactc gttgttcctt
    31801 gatccagtgc taaaatatat ttcttttcca tgtaaaattc ctcctctagt tttaagtaca
    31861 acgaaagccc gaagaccttc gcttggagct agttattatt ctagcttatg ctaaatcttt
    31921 tttcttgtcg agttgcatcg ttaaaataag aattaaaaca aataatactg cgaacaccca
    31981 gaaccacatt cctagttctc cgttaataat ggcattatac cctaaagcac ctaatgcacc
    32041 gcccatgatt ggtccaataa ctggaaccca tgagtaaccc caatcagatc cacctttgcc
    32101 agaaatcggc caaacaaaat gcgcaattct cggtccaagg tcacgagctg ggttgatggc
    32161 ataaccagta gttccaccaa gagacatccc gatagctacg attaatgcgc cgacaacaag
    32221 tggatttaat ccatctgaaa aagaatttgc acctagtgat agtaatccaa atactaaaat
    32281 aaaagtacct aatgcttcac caaaaaagtt agatgtaaaa tggcgaatag ctggcgccgt
    32341 tgcaaaaaca cctagttttg ttggtttgtc ttctgtttgt ttccagtgag gatagtaatg
    32401 taaccatatt agcgttgccc caataaatgc tccgataaac tgagcaagaa tatatggcaa
    32461 tacgtaattc cacgggaaag cacctgcaag cgccatacca atagttacag cagggttaag
    32521 atgggccata ctcatatatc ccgaaacata tacacccatt gtaacaccta gcccccaagc
    32581 taaagtaata acgacccagc cgccattctc cgctttagat cttttcagtg aaacacctgc
    32641 tacgacacca gcacctaaaa taattaggat agccgtacca ataacttcac ctagaaattg
    32701 tgttgctaaa cttgtgtcaa tcatcttttc caactccttc ttcttgctta tttgtatcac
    32761 cggaatttta acacttacta gtccccttac attccgatta tcaattaact tcaaaaaaag
    32821 aatgacaatc aaaacgtagg cacactagta cccttgcatc gtttcgattg tcatctcttc
    32881 tcctgacatt ttaattaact tgagtctatt taatcatatc aagaaaacgc tgtcaatcaa
    32941 acgacttgtc ctatttttca caatgtctct tcatctgcct ctttacattt accccaattc
    33001 acgagagtta taaccctttt taaaagaaat taattcacaa agatgaaaac acaaaaaaac
    33061 cgccacaagt gacggtttta aatttgtatt taagcttctt gtacttcagg ataaacgcta
    33121 acttttttct tgtcgcgtcc catacgttcg aaacgtacaa cgccgtcagt tttagcgaat
    33181 aaagtatcat cgccgccacg tcctacgtta gttcctggat agattttagt accacgttga
    33241 cggtaaagga tagatccacc agtaacaaat tgtccgtccg cacgttttgc acctaaacgt
    33301 tttgattcag agtcacgtcc gttagaagtc gaaccgccac cctttttgtg cgcaaaatgt
    33361 tgaatatcaa attttaacat gaaattccac ctcctatttg gagttaattt ttatatgatc
    33421 aggatagctg tacgctaatg accttagttg attttccatc cctgtaagca agatttgcac
    33481 cacgtcatct ccgacataat cagcaggcac agaatagtaa aggtaaccct ccgactcttc
    33541 tattacaggc tcaaaatcac gtacttccga aatagcattc accattccaa aagcaataga
    33601 ggatgctcct gcacatacca aatcactgcc atgttcggca aaatcggcgt gtccactcat
    33661 tgtaaaagaa attatttggt tgtcttctcg cataacatcg acttgaatca ttgttttcgt
    33721 cctttcaaat taagcattga tagcatcaat agttaatttt gtgtaaggtt gacgatgacc
    33781 ttgttttttg tggtagttct ttttcggttt atatttataa actgtcaatt tcttcgcacg
    33841 gccttgtttt tcaactttag ctgttacagt tgcgccttcc acgaatggaa cgccaacttt
    33901 agcggaatct ccacctacga atagaacttt gtcaaaagta acaacatcac caacttcacc
    33961 tgctaatttc tcaacataga tctcttggcc tgcttctact ttgatttgtt tcccacctgt
    34021 ttcaataatt gcgtacatac ttgcacctcc tcatatacta agactcgcca tcacagggga
    34081 tttacacgaa gtaaacactt gacccagctc tgtgcggttg tagcttggtg cgctacaaac
    34141 ataacagtaa aatgatagca taagcaagca gcctatgtca accaattgtt gattttagtt
    34201 ttccacccgg ccaatttgat aaaacgggac tctttcatcc gccacttccc aatcaattgg
    34261 cgcattactt agcgtattca aatctaaaaa agtatctaaa acatcttctg tcgtaataat
    34321 ttggatattg cttggctcat tttgcataat ccctgaaagc tctcgttcta attcgaaagc
    34381 aagcgtctct ttggaagcca catggcccgt cgcataacaa actggacaag gcatcgttgt
    34441 cgtttctaaa aaggattgct gttttttgcg tctcgtcagt tgtaatagcc ctgactgcga
    34501 taaagcagca acttgtgttg taatatattc ttcgcgagtt ttgatctcta acgcttcata
    34561 aagcgctgtg tagcccaatt ctgacattcc tccaataaaa tccactaata tcatcccact
    34621 catattacgt aacctaattt gtcgaaggat ttcaggaact gctttgagat ttactgattc
    34681 tactgttttt tcttttgctg tggtaccttt aaatttacct gagtttacat caacaaccca
    34741 catcgcttct gttttttcaa taaataaaga agaaccatta cttaaatgaa ccactggtcg
    34801 tgcgagccta tctatttgag ctttgatacc taggtccgca aataaatcag cgcttttctt
    34861 tatgatgatt tgcttatccg gccatagcat ttctagcatt ttagcaaact caaaatcatc
    34921 cgtaattact tctgatggtg cgtatcgttg aatgaactgt ttcgtactat ttaaaattcc
    34981 cgaagccact gataatagta agccaggttt tttccgcttg ctagcttctt ttaataatgt
    35041 ttgatgttta tctctcgctt gaaccaaggc ttgttgcaat tgctctttcg tcgcaaattc
    35101 tgcattagat cgaataatta ccgcttcatt ttcttccacc atggtttccg ttattttctt
    35161 taatctgatt ttgtctccta ttcttttaga aatagaaata tattcttttc cata
//
LOCUS       DASDYK010000016        35116 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.016, whole genome shotgun sequence.
ACCESSION   DASDYK010000016 DASDYK010000000
VERSION     DASDYK010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 35116)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35116)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35116
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.016"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..200
                     /locus_tag="U0308_000819"
     CDS             <1..200
                     /locus_tag="U0308_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014931629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="competence protein ComK"
                     /protein_id="HEM2315807.1"
                     /translation="SFNNQIARTSMLHMKFSQKMRIMESNFPSMNRFFPPTTLAAEPR
                     RYYSTMLPNNEDPNEPQDPEQ"
     gene            complement(255..602)
                     /locus_tag="U0308_000820"
     CDS             complement(255..602)
                     /locus_tag="U0308_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2315808.1"
                     /translation="MEFGEKLIHLRKKNRLTQKQLAAKIGTTASTISKYENDNHRPPI
                     FILAKLAEILGTTTDFLLDDVAGLREKNSVNAFPLIGNPELEKWYLELPYTYSEDELL
                     MLKRIADAIENKK"
     gene            complement(708..2606)
                     /locus_tag="U0308_000821"
     CDS             complement(708..2606)
                     /locus_tag="U0308_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2315809.1"
                     /translation="MRITDLLSKDVMIMSLQATTKEAAIDEMIASLKSNGKINDEVLF
                     KEAIMNREAQSSTGVGEGIAMPHAKTKAVNEPTVVFAKSEKGLDYDALDGQPAHLFFM
                     IAAPDGANATHLETLAALSRLLVHPAFVQSLRDAKTPEEVINLFNNEQEDAEETVVAP
                     TSTNETGKSVVAVTACPTGIAHTYMAAEKLQETANKLGVRIKVETNGSRGVENRLTDK
                     EIAEADGVIIAADVQVDMPRFDGKHLIAKPVAAGIHKPEELIKEAISGNAPIYKAEEG
                     SQATESADGLSIGQQIYKHLMSGVSHMLPFVIGGGIAIAIAFMLDQMLGVPQDQLAKL
                     GSYNEIPALLKQIGDVAFGFMLPVFAGYIAYSISDRPGLVAGFVAGGVASVGGAGFLG
                     ALVGGFLAGYAVELIKLALKKLPKTLDGIKVVLFYPVLSVLIVGLLMLLLNVPMSALN
                     TWLNDFLNSLSGTNAVILGLLLGAMMAADLGGPINKAAYIFATGTLAASVATGGSAIM
                     AATMAAGMVPPLATFVATLIFRNKFTAQERDAGLTNSILGASFITEGAIPFAAADPLR
                     MIPSFIAGSAITGAVVMFLNIKVLAPHGGVFVIFLVSQPWFYIIAIIIGTLISAGLIG
                     VLRKKPTV"
     gene            complement(2608..3531)
                     /gene="pfkB"
                     /locus_tag="U0308_000822"
     CDS             complement(2608..3531)
                     /gene="pfkB"
                     /locus_tag="U0308_000822"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HEM2315810.1"
                     /translation="MIYTITLNPSIDYIVQIDQLNLGGLNRMKQDYKLPGGKGINVSR
                     VLNQLNVPSLATGFLGGFTGNFIKDWLQNEGVKTGFVTVKDDTRINIKLKHGEETEIN
                     GLGPAISEKEINGFLKVMDKVTANDIVILSGSVPPSLGNDFYNKIIQICKEKKAEFMI
                     DTTGQELLDALPNHPILIKPNHHELADLFGVKLGSVEELIPYGKKCLELGAQHVIVSM
                     AGDGALLFTGEDVYFADALKGELKNSVGAGDSMIAGFVGTFDKTRDPVKAFAAGVATG
                     GATAFSTDLAQKELIDELLPQVKITKITGRN"
     gene            complement(3528..4280)
                     /locus_tag="U0308_000823"
     CDS             complement(3528..4280)
                     /locus_tag="U0308_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM2315811.1"
                     /translation="MLNAERKQLIMESIEKLGVIKLQELVEGLATSESTIRRDLIELE
                     EQGLIQRVHGGAKLVKLHNQEPSMNEKSFKNIQSKKVIAVYCASLVEENDCIYLDAGS
                     TTLELITHLANRNITVVTNGLTHIEELVRQNIDAYLLGGKMKVHTKAIIGAVALDNIQ
                     NYHFDKAFIGTNAMHPEHGYTTPDMEEAFVKRAAKERADRVFVVADHTKFNEVNFSKM
                     FSIEEATIVTDYIPSAVKESFIQKTKIIEVEK"
     gene            4498..5823
                     /gene="pepC"
                     /locus_tag="U0308_000824"
     CDS             4498..5823
                     /gene="pepC"
                     /locus_tag="U0308_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase C"
                     /protein_id="HEM2315812.1"
                     /translation="MHTELTFEQLESFSRKWRENPDKLVFQASIIKNGIKAATENPAS
                     KVSIQPVFSHEVATDKVSNQQQSGRCWMFAALNTFRHKLNGTLGLKDFELSQNYTNFW
                     DKLEKANYFLENIIETASEDEDSRLVSWLLDTPQQDGGQWDMLVSIIEKYGVVPKSAM
                     PETFQSSKSADLNHLLNERLRTDAVILRNAIAEKKDTADLKEEMLAEVYQLLVMTLGE
                     PPKVFDFEYRNKDNEFKQELQITPKDFYERYVDMDLKDYIPLINAPTKDKPFNQAFTV
                     EYLGNIVNGTPIKYLNVEMDVLKKAAADQIKDGETVWFGCDVGQLSERNTGIMDTDIF
                     LLNQTFGFKTAMTKAERLDYKHSMLTHAMVLTGVNIANGEVNRWKVENSWGEKIGNNG
                     YFVASDAWMDEFTFQVVVHKKYLSKELIESFNQKPIVLKPWDPMGSLAL"
     gene            complement(5820..6263)
                     /locus_tag="U0308_000825"
     CDS             complement(5820..6263)
                     /locus_tag="U0308_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF523 domain-containing protein"
                     /protein_id="HEM2315813.1"
                     /translation="MIAVSACLAGIACRYDGKDKEITKIKQMVERGEAIPFCPEVTGG
                     LPTPRNPAEIIGGDGKDVWLGHAKVIDNKGTDVTEEYKNGARLTLIKMQELGITQIIM
                     KEKSPSCGSCAIYDGTFSGKIKDGTGVAAALFQMNGIKIISEFAF"
     gene            complement(6344..7255)
                     /locus_tag="U0308_000826"
     CDS             complement(6344..7255)
                     /locus_tag="U0308_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HEM2315814.1"
                     /translation="MKNYLSLSEEVKQAKAEGKAIVALESTIISHGMPYPQNVEMARD
                     VEQIIRDNGAVPATIALIDGKIKIGLSDEELELFAKSSNVAKVSRRDIGYLIATKQLG
                     ATTVAATMICAELAEIGIFVTGGIGGVHRGAETTMDVSADLEELAKTNVAVVCAGAKS
                     ILDLNLTMEYLETKGVPVIGYQTDVLPAFYTRSSDVELTLRADAPEVIAESLKAKWDL
                     QIKGGAVITNPIPEEFAMDEKVINDVIQTALKEAEENHIHGKDVTPFLLGKVKELTDG
                     KSLEANIELVKHNALIGTQIAVAYQNI"
     gene            complement(7252..8370)
                     /locus_tag="U0308_000827"
     CDS             complement(7252..8370)
                     /locus_tag="U0308_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2315815.1"
                     /translation="MENNKAKMNEKEEIIFNSIRKNPYISQQELADILDLSRPTVANL
                     ISGLIKKGRILGKAYILNEAKQIVCIGGANVDRKFYIKDKAQLATSNPVRSTQSAGGV
                     ARNVGENLGRLGKEVILLTACGTDSDWEAVKNASNTYMNLDYVTAFPSIATGSYTAVL
                     ENNGDLLVALADMDAYDHLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEIN
                     SIPLVLVPVSSPKMSHLPERLDHVTWLICNRDESETHLGMTIKNDEDWRLAAQKWLDL
                     GVKNVIVTNGSKGAVAANKGEGTIFEPAIVIENIVDVTGAGDAFCSAVIYAWLEGKAL
                     KEILRAGSVNAARTLESEYTVRQNLSTSQLQKDMEEFK"
     gene            complement(8503..9204)
                     /locus_tag="U0308_000828"
     CDS             complement(8503..9204)
                     /locus_tag="U0308_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEM2315816.1"
                     /translation="MRLDKLLSHTGFGSRKEVKPLLKSGAVVVNGTIQKDSKTQVNPD
                     KDQVTVHGTPVVYQEFVYFMLHKPQNVVSATEDNVSETVIDLLAQEDTLTDPFPVGRL
                     DKDTEGLLIITNDGTLAHNLLSPKKHIDKTYYAKIDGDVTLADVEAFAAGIELDDGYT
                     CKPARLEIITPNEINVTIQEGKFHQVKRMFAARGKKVSYLKRISMGNLQLDESLGLGE
                     YRPLTESELAILQNK"
     gene            complement(9278..10600)
                     /locus_tag="U0308_000829"
     CDS             complement(9278..10600)
                     /locus_tag="U0308_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEM2315817.1"
                     /translation="MTRKETIQFGAIIHGVGGTTDGWRHPDINPAASTDLDFYKTRAK
                     IAEQGLFSFVFIADGLFISEKSIPHFLNRFEPITILSALAESTENIGLVGTFSTSFTE
                     PFTLARQLSSLDHISGGRAGWNLVTSPQEGAARNHSKKNLPTHSDRYTIAAEHLKVVR
                     GLWSSWEEDAFTYNKETGEFFNPEKLHRLNHQGEYFQVEGPLNIGRSKQGEPVVFQAG
                     ASSTGRDFAAKNAEAIFTHSDSLEEAIEFYQDVKARAEKAGRNADEVRIFPGISPIVA
                     DTLEEAEAKYTEFASLIPIENAVTYLARYFDDYDLSQFDLDAPFPDLGDIGKNAFQST
                     TDRIKKEAKERHLTLRQVATEAATPKTPFIGTKEQVADLIDVWFQNDAADGFIIASDI
                     PGTFETFVEQVIPLLQSRGLYRNEYPATTLRGNLGLTIPQNKQVVETK"
     gene            complement(10597..10863)
                     /locus_tag="U0308_000830"
     CDS             complement(10597..10863)
                     /locus_tag="U0308_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HEM2315818.1"
                     /translation="MANVVVWSKVGCHYCKDVKDYLTEQKIVFQDIDVTDHDYLREVL
                     QAKYGIRYVPVVEIGDIEKGTYQAVTEIGLEHLEKALFEKEEVK"
     gene            complement(10856..11851)
                     /locus_tag="U0308_000831"
     CDS             complement(10856..11851)
                     /locus_tag="U0308_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEM2315819.1"
                     /translation="MTIRFSILDQSIINPGEKPSEALQNTVELAQLAEQLGYHRFWVA
                     EHHNSDEIAGAAPEVLLGYIAAKTSTIKLASGGIMLQHYSPYKVAEQFHVLENLAPGR
                     MSLGVGKAPGGFQPATDALQKDFVKPTRTFDAKLKELVDFVTHHSEVAIAAKPLPENK
                     PEIFLLGGSAASAKQAAKLGISFVFAYFINGEEAVLKEARELFEQYRINTKASFQLAP
                     IVVVAETKIAADRHIPERESIKVELADGRRVNVGSREQAESYVKDINQTYRFITQRIG
                     AITGTKQEVGAEIKRLSKEYNIQDFVVLTPVKSTEIKRYSYQLLSESIKEEVVHG"
     gene            complement(11848..12627)
                     /locus_tag="U0308_000832"
     CDS             complement(11848..12627)
                     /locus_tag="U0308_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM2315820.1"
                     /translation="MITIKNIQKSFGENKVLKGIDLTVKKGEVVTILGPSGSGKTTFL
                     RCLNLLERPENGEISMHDQIINCKKPSKKEVLQLRKNTAMVFQQYNLFSHKTVIQNVM
                     EGLTVARKMPKKIAREIAERELTKVGLADKFSAYPSQLSGGQKQRVGIARALAINPDV
                     ILFDEPTAALDPELVGEVLEVMLEIARAGATMIVVTHEMEFAKRVADQVVFMDGGLIV
                     EQGTPDEVFNHTKEERTKRFLHRVSADYLYEIKEVKKERVI"
     gene            complement(12624..13331)
                     /locus_tag="U0308_000833"
     CDS             complement(12624..13331)
                     /locus_tag="U0308_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM2315821.1"
                     /translation="MPLDVPFIGTAVMAMLKTIPLTLAMTFFPILFGFIIAIGMTLIR
                     MYHVRFLEPIAKFYVSFFRSTPAILHIMLIYLGIPLLVDFLSKSFGLGISANKIPVVI
                     FVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGYTHGQAIRKVLLPQAFMIALP
                     NFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLEAFIGAALIYWFLTILIEA
                     INYILEKNIAKYRGGTV"
     gene            complement(13345..14061)
                     /locus_tag="U0308_000834"
     CDS             complement(13345..14061)
                     /locus_tag="U0308_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM2315822.1"
                     /translation="MDKAFDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVLLSL
                     PRIYKIPVLDQLARVYISFFRGTPIMVQLFIVFYGIPALSSIVGIDLSQMDPLYAAIA
                     TYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGN
                     LVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALEVYISLSIIYYLTAVLLEYSFKW
                     IEKRVKKENTRFTSIFDIEL"
     gene            complement(14083..14892)
                     /locus_tag="U0308_000835"
     CDS             complement(14083..14892)
                     /locus_tag="U0308_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2315823.1"
                     /translation="MKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQ
                     FPNVCFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQ
                     MEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLK
                     KINEEQGNNFEIAYEGQGSNDTANQLKTGRADATISTPFAVDFQNKTSAIKEKVVGDV
                     LSNAKVYFMLGKDETKLSKDVDEALQSIIDDGTLKKLSEKWLGADYSKEQY"
     gene            complement(14909..15445)
                     /locus_tag="U0308_000836"
     CDS             complement(14909..15445)
                     /locus_tag="U0308_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2315824.1"
                     /translation="MTEDIFRVATVDDAPEFLELLSSAFQSVKELGIDWPSTNADLAM
                     VTENIVNSSAFVLERNGKLISTITVRFPWESSSPPSKYPFVWWFATAPELAGQGIGDK
                     LLTYVEERVLRDTLKAPALTLGTSARKHPWLLDMYLRRGYEVYFEHEEDGDVGVMMRK
                     ILIPEKFDATLLGIPSWT"
     gene            complement(15461..16006)
                     /gene="ssuE"
                     /locus_tag="U0308_000837"
     CDS             complement(15461..16006)
                     /gene="ssuE"
                     /locus_tag="U0308_000837"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HEM2315825.1"
                     /translation="MGKVTIIAGGIKTESRLTGLTQLAANELVTNGLEVNIIEVHKIN
                     AEALVTADFAHSDIQLANSEIESSSGVIIATPIFKAAYSGVLKAYLDLLPLKALKGKV
                     VLPLGLGGSNGHLLALQYALDPVLKELGAETILKGQFTVDKQIERFGDGLYEIESSAK
                     ERLDIALNQFISLLNQQSVEV"
     gene            16249..17148
                     /locus_tag="U0308_000838"
     CDS             16249..17148
                     /locus_tag="U0308_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2315826.1"
                     /translation="MEFRTIKTFYTVVNTGSFQRAAEVLNYSQPTISMRIKQLEQDLD
                     VQLFERGKTLKLTHAGRLFYERAGQLIAQYEVLDHTIFDLKNGNAGLIKVGISEPSAS
                     LVFPKILKTFLADFPKLMVNVSVDDANTCSQKLIDGEIDFAICGEPELILENFYFPFF
                     HDSLDLIVSESHPLASRTSVELRDLRDECFIFTPANCPIRIQIEQHLKRAIGSDYKKM
                     ELTSSMSHKYFVRENVGVSIFTSTAHSELLDGTVRIPIENLPISPPIGLLTNQKEKDF
                     DSTTKELIDRIIYYFDDKKRQLG"
     gene            complement(17174..19126)
                     /locus_tag="U0308_000839"
     CDS             complement(17174..19126)
                     /locus_tag="U0308_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEM2315827.1"
                     /translation="MEIFELILLMLSAVFLSNVLSRFLPGIAVPLIQVILGIILAIPL
                     GDHTMDLNPELFLLLFMAPILFNDGASTDKKSLWKNRKAILSLSIGLVFVTVGVLGAF
                     IHYLIPAIPFAAAFALAAALAPTDAVAVGALAEKVRVPHKIMHILEGESLINDASGLV
                     SFQFAVLALVTGTFSFMSAGTSFLLLSLGGIALGAALSLLKIMLMRGLRQLGIENMTS
                     FMLMEILLPFLIFMVAEKVGVNGILAVVSGGMVHSFSYKGLNPEIAQLNLLSKNTWSV
                     IIFSLNGLVFILLGTQLPQILMTIWQDANIQKGMLFVYILGITFLLLGLRFLWILFFR
                     NYEENPKVDLVSRLKNTFLYTVAGVRGTITLVSALSLPFVLGNGNAFPERDLLIFIAA
                     GVIITTLLLANFTLPLFADKKDKIAADHTTDIVLLRDIVQQLQAYKTDENTVEMNKVL
                     NMYNNRIFSLMEHKEVNATEKELRRLTQEWQLENTRRLVFERKIDTGVGLSHMMRLGK
                     RLYVQTRAEKYRARMRYRQLLSHRFRDFRFVPLTFEERRKEIAKLQNENNLFVIQKLQ
                     ELDSNEYNPEIISLYLMNFERALGRGKNKKESNDEALQTTIDLASQIERETIQHYFEK
                     GTITRKEMKVYRDNLLAIEANMQLEF"
     gene            complement(19250..20848)
                     /locus_tag="U0308_000840"
     CDS             complement(19250..20848)
                     /locus_tag="U0308_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEM2315828.1"
                     /translation="MKLWKNATFYQMTAEGDQVSAVLTENGHIYAVGEARELEKQHAA
                     NITETIDLEEKVVFPGFVDAHIHLLWYGQALERLNLNQTTTKKEALALIAERTKQLAS
                     DEWLFVEGYDENKWSDEQTLISLADLDEVSQTNPILVRRIDYHSVSINSALQAHIADF
                     SENGFDGGGEIVRDKAGNFTGILRDNATTMAIDSFPAATPSELSAWLKIAITDLWSKG
                     ITGAHSEDLHYFTGFTSTLAAFRNTIGANKMPFRAHLLVHHAELAAFSASNESFVSGD
                     AFLELGAMKIFYDGTVGSRTALMSAGYADNSDEKGLQIHSDQAFEDLVKAARKAGLPV
                     AIHILGDQAFANVIRTLRANPPREGQYDRLIHTPWLTEALIEEAAGLPVLFDIQPQFM
                     TSDLPWALEVLGENHPPLAFAWKTLLQAGFPLAGGSDAPIEVPNPFWGIHAAVTRTAN
                     ADLDGVEYWPEQALTVFEAIQLYTKGAAFAGYKTTTRGQIAPGFVADFTILAEDPFQM
                     KQADLRQVSAMMTVVDEQIVYQKK"
     gene            complement(20852..22093)
                     /locus_tag="U0308_000841"
     CDS             complement(20852..22093)
                     /locus_tag="U0308_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2315829.1"
                     /translation="MTKWLPKDLWIVIIGMVLLYTGLSFIWPFNMIYMTQELGMSTTD
                     ASLVLLINSGVGIVSSIIGGLIFDRFSGFISLTIGTIILVLSTASLCFFHGFPFFIWN
                     LWAVGIAMGMVFSGLYAAAGLTHPTGGRTGFNAIYVAQNIGVAIGPLLAGLLAKQGMS
                     HVYIGSFVFAIAFAGYFFFFFHKIDWKSERVSAETKHRKKGAKLEFPTKLALCSFILL
                     LLTYLLCQLPHVQWQSNLSTYMTEIKGVTSSEYGNLWSLNGALIVLGQLILIPVVNRF
                     KKYLLAQIYIGIFLFILSFVVAMNASVYSGFVLGMIFLTLGEMFAWPAIPTIAYQLAP
                     KGAAGLYQGLVNGMATAARMLAPFLGAIVVQNLGGIKALFIGAFILLGCALISITLQQ
                     ILQKKDQQDKAALKISVNQGE"
     gene            complement(22294..22905)
                     /locus_tag="U0308_000842"
     CDS             complement(22294..22905)
                     /locus_tag="U0308_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315830.1"
                     /translation="MEERFTTELMFTLTNNPRFQEVAELVYWNEEEIVHCPENNEYVY
                     AIDEGNVTQCAARNSSWGKGSILGFTREETKIHPLSKTVAWKIPLTYVKDILKSMGKI
                     KVADLTMIEKNFLDRNEIDCIQWFIQEMPLRLHTTSWKVALDFFRQEIMQVVPKEICA
                     FQVKELKQQHILYELGYYLEIDVLQFHNYLRDLAYKKVLQKIN"
     gene            complement(23095..23625)
                     /locus_tag="U0308_000843"
     CDS             complement(23095..23625)
                     /locus_tag="U0308_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HEM2315831.1"
                     /translation="MRKLYTYFVLILGVAMIGLGIYLMFNPSTSLQALTIFIGIILVL
                     NGINEVISYFGEQKYWSISKWIMFDGILSILIGGFAIFESNMAERVFIIIFAIWILAS
                     AILRILTAFAVKGLPGWTVLLIMGIIGLIIAVISLFTNMLVAIAVGIILGIFFIFQGI
                     TCLSLWWVIRKGESRK"
     gene            complement(23641..24372)
                     /locus_tag="U0308_000844"
     CDS             complement(23641..24372)
                     /locus_tag="U0308_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HEM2315832.1"
                     /translation="MKLIRTKTYEEMSQEALEVVKQVINENDNPVINTTTGASFDGMF
                     EGLVKGINAGEIPIEKVFLMNLDEYVAKRDASFTVYTYMHQKFYDLINKMPKRVELLD
                     GSLADFTDEIARYKKILAENERDLQILGLGVNGHLGANEPGTPFDARLFLADSDESTI
                     KSTIMYNNLKEDEAPSQMLTLGLADMMDAKQILVTASGERKAEAVKGLLEGPIDESCP
                     ASILRNHPNVVFIIDEAAGSLLTNH"
     gene            complement(24416..25261)
                     /locus_tag="U0308_000845"
     CDS             complement(24416..25261)
                     /locus_tag="U0308_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2315833.1"
                     /translation="MTKKIVFVDVDGTLVTDDGLVPASAKTAIIKARNNGHQVYLCTG
                     RSKPELYDSILSIGFDGIIGAGGGYIEVDDEIVYHKKVANEDVVHMVDFFHEKNLDFY
                     LESNGGLFASENLEAHLDSLVYGDVENDPIAREKKANNPHPFMTSLTYGETNLYRTDV
                     NKACFLENKNVPFEEIKNEFSGKFEVLHCTVPIFGDDSGELMVPDIHKATAIEFLLAH
                     IGAEKNTTIGIGDGMNDAEMLTYCETGIAMGNAKEELKLLADEVTKSVEEDGLYASFL
                     KHGLL"
     gene            complement(25381..28164)
                     /locus_tag="U0308_000846"
     CDS             complement(25381..28164)
                     /locus_tag="U0308_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HEM2315834.1"
                     /translation="MDMVKNEWKKLFKNKILLLSFVVILFIPLLYASFFLKSVWDPYG
                     KTGDLPVAVVNNDKPVDYNGQTMDVGDQLVTKLKSNKELDWNFLSKEDAEQGLKDGKY
                     YMIVTIPKDFSKNAASVLDKDPKKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEV
                     TKSYAEAIFDKIKESGEGFAQAADGSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFK
                     DGANTLEVGLKTYTDGVNTAAAGGDKLNDGVSTLAAGVGPLKDGVAALDGGATKLASG
                     VSTYTSGVDTLAGGINQAYTGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLD
                     SLVDGSNKLSAGLKELDGNLTDKQGKIAQLKQGMNDLQQGIDQLNKSVNGEDAALAKQ
                     LAALQKSLSDLQNGLTFIKSNANFDAEAIKSKINATAGVSAEDKQKIIDAIQADLDKE
                     TQKSATQVATVEQLQSGLSGLDLAAIQTQVTELQTGVAKISAGYQAVHGGTNEAFNSI
                     HQAINGSGSQTLLGGANQLTAGLKSAQAGNAKLVAGTNQLNNQVPTLTSGVGQLAAGS
                     ANMENGLSQLNDGGNQLASNSGALRSGATELQGGTNQLAAKVPTLAGGVNQLQAGSSQ
                     LVGGLNQLSANSPKLVSGVGQLADGSSKIADGSSKLANGSFQLGDGLTKLTDGSTELT
                     DKLADGAQQVKDTKATDKTFNMIAAPTKLAHNEYTHVSNYGHALAPYVLSLALYVGAL
                     VFNFIMPIRRVSMEGQPAYKWWLSKLSLGFVAAVAMALLEGGIMIALGLRPDNIVEFF
                     GTAIITALAYMFLIMLLAMTFDNPGRFIAMVLLIVQLAGSGGTFPMPLTGWFFNLIHP
                     FLPMTYSIYAFRESLAAGMGPNVYSMSMLVLTIIMIACVGLLYLSMSHLKKRHDAHES
                     ALDDNQKLMALEN"
     gene            complement(28198..28668)
                     /locus_tag="U0308_000847"
     CDS             complement(28198..28668)
                     /locus_tag="U0308_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM2315835.1"
                     /translation="MKLSKSMDQVFCIMTMLYTQKVDVPISSVTIHHRLRDSSPSYIS
                     KILRKLVVSGLINSVSGNNGGFTLAKDPEEINLLDIVEAVEGKIDTYPDSDLIHTVFS
                     DYHEFAESGIHTITSAFRNADKEYANYLYSQKLSVLVEQVIGKERTTIIDWNEA"
     gene            29061..30584
                     /gene="gadC"
                     /locus_tag="U0308_000848"
     CDS             29061..30584
                     /gene="gadC"
                     /locus_tag="U0308_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate:gamma-aminobutyrate antiporter"
                     /protein_id="HEM2315836.1"
                     /translation="MSKQAKSLTLFGFFAITASMVMTVYEYPTFATSGFHLVFFLLLG
                     GFLWFLPVALCAAEMATVDGWQEGGIFSWVGNTLGERFGFAAIFFQWFQITVGFVTMI
                     YFILGALSYVFDFPALESNPFIKFIGVLIIFWGLTFSQLGGTKNTAKIAKFGFIIGIL
                     IPAIILFILGIAYVAGGNPLHVAFSKEAFIPDFSKASTLVIFVSFILAYMGVEASASH
                     VNEMTNPKRDYPLAMIMLVILAIALNTIGGLTISAVLPLKDLSLSSGVVQTFQALILH
                     FGSGLGWAVKLIAIMIALGVMGEVSAWVVGPSRGMYTAAEQGLLPEKMKKVNKHGVPV
                     PLIMVQGVVVTIWAAILTFGGGGNNLSFLTAISLTVVIYLVGYLLFFIGYLVLIFKKS
                     SLKRTYQIPGGKIVKVIVALIGLVTSVFALCISFVPPASIAAKSDTTYMVILSISFIV
                     TVLIPFIIYAVHDKKDISPKDITHLESSDINKFTHPRARGEHIINPDEKHIMNQDKL"
     gene            30597..31991
                     /locus_tag="U0308_000849"
     CDS             30597..31991
                     /locus_tag="U0308_000849"
                     /EC_number="4.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HEM2315837.1"
                     /translation="MLYSKENKESYLEPVFGSSAEDRDIPKYTLGKEPLEPRIAYRLV
                     KDELLDEGSARQNLATFCQTYMEDEATKLMSETLEKNAIDKSEYPRTAELENRCVNII
                     ADLWHAPKNQKFMGTSTIGSSEACMLGGMAMKFAWRKRAEKLGLDIYAQKPNLVISSG
                     YQVCWEKFCVYWDIDMRVVPMDKDHMQLNTDQVLDYVDEYTIGVVGILGITYTGRYDD
                     IYALNEKLEEYNSKTDYKVYIHVDAASGGFFTPFVEPDIIWDFRLKNVISINTSGHKY
                     GLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYG
                     FEGYRTIHQKTSDVAQYLAHAVEQTGYFDIYNDGSHLPIVCYKLKDDANVKWTLYDLA
                     DRLQMRGWQVPAYPLPKNLENIIIQRYVCRADLGFNMAEEFIQDFQASIQELNNAHIL
                     FHDTQQSGVHGFTH"
     gene            complement(32000..33514)
                     /locus_tag="U0308_000850"
     CDS             complement(32000..33514)
                     /locus_tag="U0308_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2315838.1"
                     /translation="MLTNYIEKDIKRKCLICDFLLKNKHTNLDEIAEYMETSRVTVRS
                     DIHALNEELDGLIVIQMKECVDNWVYQCRLQNGATERKVLYKLYDNSMFLKCVAFFVT
                     NVEERKFTDFMDTYFISHSHAYRLKHKVEAFLREIDLTLDNNRITGKEYRVRYLIALL
                     QAEYGVLIYPLLDEEKQMIDDFMATLNLRINIDTLAHNAEGHAYFRSLISMAFKRDIP
                     TSAIILDEQCQKYIESSSFLAMVRKSSKETLEKELGQEFSYNDYLYLMLIYYSTNFSI
                     IDASMKKVELEQFNELIMKNADLQVLIDLFEEYFGPEVVNHSLFRAALCYFLKKTLFN
                     LQGLIPSNERLLDKKYEPLYMVVKNVLERWNEASEYRVLLIDSHINYLTIHLYPLIYK
                     WNNPVQICIFSFNLINFESCKFQVEQELGRKVTVHETMFNSVEELNQVLTESSEPTIV
                     LCHPNCEMELKEAVDGMIIPISLAFFDRDLVDVERAIQSLRIKEHEKRLAYLRG"
     gene            complement(33863..33946)
                     /locus_tag="U0308_000851"
     tRNA            complement(33863..33946)
                     /locus_tag="U0308_000851"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33910..33912),aa:Leu,seq:caa)
     gene            complement(33992..34065)
                     /locus_tag="U0308_000852"
     tRNA            complement(33992..34065)
                     /locus_tag="U0308_000852"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34031..34033),aa:Cys,seq:gca)
     gene            complement(34085..34156)
                     /locus_tag="U0308_000853"
     tRNA            complement(34085..34156)
                     /locus_tag="U0308_000853"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34122..34124),aa:Gly,seq:gcc)
     gene            complement(34162..34233)
                     /locus_tag="U0308_000854"
     tRNA            complement(34162..34233)
                     /locus_tag="U0308_000854"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34199..34201),aa:Gln,seq:ttg)
     gene            complement(34263..34335)
                     /locus_tag="U0308_000855"
     tRNA            complement(34263..34335)
                     /locus_tag="U0308_000855"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34300..34302),aa:His,seq:gtg)
     gene            complement(34351..34424)
                     /locus_tag="U0308_000856"
     tRNA            complement(34351..34424)
                     /locus_tag="U0308_000856"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34390..34392),aa:Trp,seq:cca)
     gene            complement(34432..34515)
                     /locus_tag="U0308_000857"
     tRNA            complement(34432..34515)
                     /locus_tag="U0308_000857"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34479..34481),aa:Tyr,seq:gta)
     gene            complement(34535..34607)
                     /locus_tag="U0308_000858"
     tRNA            complement(34535..34607)
                     /locus_tag="U0308_000858"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34572..34574),aa:Phe,seq:gaa)
     gene            complement(34612..34687)
                     /locus_tag="U0308_000859"
     tRNA            complement(34612..34687)
                     /locus_tag="U0308_000859"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34652..34654),aa:Asp,seq:gtc)
     gene            complement(34694..34767)
                     /locus_tag="U0308_000860"
     tRNA            complement(34694..34767)
                     /locus_tag="U0308_000860"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34731..34733),aa:Met,seq:cat)
     gene            complement(34789..34864)
                     /locus_tag="U0308_000861"
     tRNA            complement(34789..34864)
                     /locus_tag="U0308_000861"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34829..34831),aa:Val,seq:tac)
     gene            complement(34922..34993)
                     /locus_tag="U0308_000862"
     tRNA            complement(34922..34993)
                     /locus_tag="U0308_000862"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34958..34960),aa:Glu,seq:ttc)
     gene            complement(35027..35115)
                     /locus_tag="U0308_000863"
     tRNA            complement(35027..35115)
                     /locus_tag="U0308_000863"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(35079..35081),aa:Ser,seq:gga)
BASE COUNT        10214 a         7585 c         6147 g        11170 t
ORIGIN      
        1 catcttttaa taatcagatt gctagaacct ccatgttaca tatgaaattt tctcaaaaaa
       61 tgcgtataat ggagagtaat tttccttcaa tgaataggtt tttcccacca accactcttg
      121 ctgctgaacc tagacgttat tacagcacca tgcttccaaa taacgaagat cctaatgagc
      181 ctcaagatcc tgagcagtaa ctttaaaacc aaataaaagc cagttacata atagtagctg
      241 gcttctcctt aaaattattt tttattttca atcgcatctg caattcgttt taacattaat
      301 aactcatcct ctgagtatgt ataaggtaat tctaaatacc atttctcgag ttcaggattt
      361 ccaattaaag gaaaggcgtt taccgaattc ttttctcgca aaccagctac atcatctaat
      421 aaaaaatcgg ttgttgttcc aagaatttct gctaatttag ccaaaataaa aattggcggt
      481 cggtggttat cattttcata cttgcttatt gtggatgcag ttgtcccgat tttcgcagcc
      541 agttgttttt gtgttaacct atttttcttt cttaaatgaa ttaatttttc tccaaattcc
      601 aatacgccca cctcacttca cttccagtat agcaattttt cggaaataat tcgagaaatt
      661 actaaaaaga aatcgccttt ttagtttcaa aagacgattt ccatatttta tacagttggt
      721 ttcttacgta gaacaccaat taatcctgcg ctgattaatg ttccaataat aattgcaata
      781 atatagaacc aaggttggga tacaaggaag ataacaaaaa ctcctccgtg aggtgctaat
      841 actttaatgt ttaagaacat tactaccgca cctgtgatag cacttccggc aataaaactc
      901 ggaatcattc gaagtggatc ggccgctgca aatggaatag ctccttcagt aatgaatgaa
      961 gcacccaaaa tagagttagt taagcctgca tcacgttctt gagctgtaaa tttatttcta
     1021 aaaataagag ttgctacaaa cgttgctagt ggtggtacca tgccagcagc cattgttgct
     1081 gccatgattg cgctaccgcc tgttgctaca ctagctgcga gtgtacccgt tgcaaatata
     1141 taagcagctt tattaattgg tccacctaaa tccgctgcca tcattgcacc taacagtaat
     1201 cctaaaataa ctgcgttcgt tccgcttaaa ctattcaaga agtcattcaa ccaagtgttc
     1261 aatgcgctca ttggtacatt taatagcaac attaaaagtc cgacaattaa caccgataaa
     1321 actggataga ataaaactac tttgataccg tctaatgttt ttggtaactt tttaagtgct
     1381 agtttaatta actctactgc ataacctgca aggaaaccac caacaagtgc tccaaggaag
     1441 cctgcaccac caacagatgc tactccacct gcaacaaaac ctgctacaag tcctggtcta
     1501 tccgatatac tgtaggcaat atatccagcg aatactggaa gcatgaagcc gaatgcaaca
     1561 tcaccgattt gttttaatag tgctgggatt tcgttatatg aaccaagttt tgcgagttga
     1621 tcttgaggaa cacctaacat ttgatcaagc ataaacgcga tggcgattgc gatacctcca
     1681 ccaattacaa acggcaacat gtgagaaaca ccgctcatta aatgtttata aatttgttga
     1741 ccgatagaaa gtccgtctgc gctctccgta gcttgactac cttcctctgc tttataaatt
     1801 ggagcattgc ctgaaattgc ttctttaatt agttcttctg gtttatgaat tcccgctgca
     1861 accggtttag caattaaatg cttcccgtca aaacgaggca tatctacttg tacgtcagct
     1921 gcaataataa ctccatcagc ttctgcaatt tctttatctg ttaaacggtt ttcaacgcct
     1981 ctagagccat ttgtctcaac tttgattcgt acacctaatt tattagcagt ttcttgtaat
     2041 ttttctgcag ccatataagt atgtgcaatt cctgttggac atgctgtaac tgctacgact
     2101 gatttaccag tttcattggt tgaggttgga gcaacgactg tttcttctgc gtcttcttgt
     2161 tcattgttga ataaattgat tacttcctct ggagttttag catctcttaa cgattgcaca
     2221 aacgctggat gaaccaataa tctagaaaga gctgctaaag tttctaaatg agttgcatta
     2281 gcgccatctg gagcagcaat cataaagaat aagtgtgctg gctgaccatc taaagcatca
     2341 taatccaatc ctttttcact cttagcaaaa acaacagttg gttcatttac tgcttttgtt
     2401 ttcgcgtgag gcattgcaat tccttcacct acaccagtag aactctgtgc ttcacggttc
     2461 attatagctt ctttaaacag cacctcatca ttaattttcc cgttgctctt taacgaagca
     2521 atcatttcat cgatggcagc ttcttttgtc gttgcctgta atgacataat cataacatct
     2581 ttgcttaata aatcagtgat tctcatttta gttcctccct gttattttgg ttatcttcac
     2641 ttgcggtaat agttcatcta ttagttcttt ttgggctaaa tctgttgaaa atgcagtagc
     2701 tccacctgtt gcaactcctg cagcaaaagc tttaacggga tctctcgttt tatcaaaagt
     2761 cccaacaaag cctgcaatca ttgagtctcc agcacctacg gaatttttca gttccccttt
     2821 taatgcatcg gcgaagtaaa catcttctcc tgtaaataga agcgctccgt caccagccat
     2881 ggacacgatt acatgttgcg cgcctaattc taaacatttt ttcccgtatg ggataagttc
     2941 ttctacgcta ccaagtttca cgccaaatag gtctgctagt tcgtggtgat ttggtttaat
     3001 tagaatcggg tggtttggta atgcatctag cagttcttga ccagttgtat caatcataaa
     3061 ttcagctttt ttttctttgc aaatttgaat tattttattg taaaaatcat ttccaagtga
     3121 aggaggcaca ctaccagata aaataacaat atcgttagca gttactttat ccatcacttt
     3181 caaaaatcca ttgatttctt tttcagaaat agctggccct agaccattaa tttctgtttc
     3241 ttctccgtgt tttagtttga tattaatacg agtgtcatct ttcactgtta caaagccagt
     3301 tttcacacct tcgttttgta gccagtcttt gataaaattg cctgtaaatc cacctaaaaa
     3361 tcctgtagca agacttggta catttaattg atttaaaact ctgctgacat taattccttt
     3421 gccaccaggt agtttataat cttgcttcat gcgattaaga ccgccaagat ttaattggtc
     3481 gatttgtaca atataatcaa ttgatgggtt taaagtaatt gtataaatca tttttctacc
     3541 tcgattattt tagttttttg gataaaggat tcttttactg cagaaggaat gtaatctgtc
     3601 acaatagttg cttcttctat tgaaaacatt tttgaaaaat tcacttcatt gaattttgta
     3661 tggtctgcta caacaaaaac gcgatcagca cgttcttttg cagcacgttt tacaaatgcc
     3721 tcttccatat caggtgttgt gtagccatgc tccggatgca tcgcgttggt accaatgaaa
     3781 gctttatcaa aatgatagtt ttgaatgtta tctaaggcaa ctgcaccaat aattgctttt
     3841 gtatgcactt tcattttgcc gcctaaaaga taagcatcta tattttgacg aacaagctct
     3901 tcaatatggg ttaatccatt tgtcactact gtgatatttc gatttgctag gtgagtaatt
     3961 aattctaatg ttgtggatcc tgcatctaaa tagatacaat cattttcttc cactaggctt
     4021 gcacaatata cagcaattac ttttttactt tgaatgtttt tgaatgattt ttcattcata
     4081 cttggttctt gattatgaag ttttacaagt ttcgccccgc cgtgtacgcg ctgaattaat
     4141 ccttgttctt ctaactcgat taaatcacgg cgaatggttg actctgaggt agcaagacct
     4201 tcaactaatt cttgtaattt aatcacacca agtttctcaa tactctccat aataagttgt
     4261 ttacgctctg catttaacat tattactcct ccatccaaag tcagtttacc atcttttcct
     4321 ttcaaaatca accgttttca ttcaaaaaca atcacacatt ttcaaattca ttcatattat
     4381 accatgtata tcgccataat ccttcacaat tattcattca gcgtttttct tatacagttc
     4441 taatttttag cagtatactt ggttagaaga taattttcat tttaggagga gttattcatg
     4501 catacagaat taacatttga gcaattagaa agtttttctc gaaaatggcg tgaaaatcca
     4561 gataaattgg tatttcaagc tagtattatc aagaatggga ttaaagcagc aactgagaat
     4621 cctgcatcaa aagttagcat tcaacctgtc ttttcccacg aagttgctac agataaagtt
     4681 tctaatcaac aacaaagtgg aagatgctgg atgtttgcag cattaaatac gtttcgccat
     4741 aaattaaacg gaacgcttgg tttgaaggat tttgagttat cacagaatta tactaatttt
     4801 tgggacaaac ttgagaaagc aaattacttt ttagagaata taattgaaac agcaagtgag
     4861 gatgaagata gtcgattagt ttcgtggttg cttgatacac cccaacaaga tggtgggcag
     4921 tgggatatgt tagtttcaat tattgaaaaa tatggagtgg ttccaaagtc agctatgcct
     4981 gaaacgtttc aaagtagtaa gtctgctgat ttaaaccatc tattaaatga aagacttcgt
     5041 acggatgcgg ttattttgag aaatgctatt gctgagaaga aagatactgc agatttgaaa
     5101 gaagaaatgc ttgctgaggt ctatcaactc ttggttatga ctctaggcga accacctaaa
     5161 gtattcgatt ttgagtatcg aaataaagac aatgaattta aacaagaatt acaaattaca
     5221 cctaaagatt tttatgaacg ctatgtagat atggatttga aagattatat tccacttatt
     5281 aatgcaccga ccaaagataa accttttaat caagctttta cagtggaata tttaggcaac
     5341 attgtaaatg gtacacctat taagtatttg aatgtagaaa tggatgtctt gaaaaaagct
     5401 gctgctgatc agattaaaga tggggaaaca gtttggtttg gatgtgatgt tggacaactt
     5461 tcagaacgga ataccggtat tatggatacg gatattttct tgcttaatca gacttttggc
     5521 tttaaaactg cgatgactaa agctgaacgc ctggattata aacacagtat gcttacacat
     5581 gcgatggtat taactggagt gaacattgct aatggagaag taaatcgctg gaaagtggaa
     5641 aatagttggg gagaaaaaat tggtaataat ggttattttg ttgctagcga tgcttggatg
     5701 gatgagttta cattccaagt agtggtgcat aaaaaatatc tatctaagga attaattgaa
     5761 tcctttaacc aaaagccaat tgtgttaaaa ccttgggatc caatgggttc gctcgcactt
     5821 taaaatgcga attcggaaat gatttttatt ccattcattt gaaaaagagc tgctgctacg
     5881 ccggtaccat cttttatttt tcctgagaag gtaccgtcgt aaatagcaca gctaccacaa
     5941 gatggacttt tttccttcat gattatttgc gtaataccga gttcttgcat tttaattaga
     6001 gtaagtctcg ctccgttctt atattcttct gtcacatctg ttcctttgtt atcaatgact
     6061 tttgcatgtc ctaaccagac atctttgcca tcaccaccta ttatttctgc tggatttctt
     6121 ggtgtaggca gtccgccggt aacttctgga caaaaaggaa tcgcttctcc tctttctacc
     6181 atttgtttta ttttggttat ttctttatct ttcccgtcat atctacaggc aattccggct
     6241 aggcaagcac ttactgcaat cattttattt tcctccttta tattcacatt tattttaaca
     6301 taaaaaagct gcccccaact tataggcgac agctctgaga ttattagata ttttggtatg
     6361 ctacggcgat ttgcgtaccg attaaagcat tgtgttttac aagctcgata tttgcttcga
     6421 ggctcttacc atctgttagt tcttttactt taccaagtag gaatggtgta acgtctttcc
     6481 cgtgaatgtg attttcttca gcttctttaa gcgctgtttg gattacatcg ttaattactt
     6541 tttcgtccat agcgaattct tctgggattg ggttagtaat tactgcgcca cctttgattt
     6601 gaagatccca tttcgcttta agcgattctg cgataacttc tggagcatct gcacgcaatg
     6661 ttaattctac atcgcttgaa cgcgtgtaaa atgctggtaa tacgtcggtt tggtaaccaa
     6721 taactggaac cccttttgtt tctaagtatt ccattgttaa gtttaggtct aggattgatt
     6781 tagctcctgc acaaacgaca gcaacatttg ttttcgctaa ttcttctaag tcagctgaaa
     6841 cgtccattgt tgtttcggca ccacggtgaa cgccgccaat cccaccagtt acgaagatgc
     6901 cgatttctgc gagttcagca caaatcattg ttgctgctac agttgttgcg ccaagttgtt
     6961 ttgttgcaat aaggtaaccg atatcacgac gagaaacttt tgccacattg ctacttttag
     7021 cgaatagttc tagttcttca tcagaaagac caattttaat ttttccgtcg attaaagcga
     7081 ttgtcgctgg tacggcaccg ttatcgcgaa taatttgttc tacgtcacgt gccatttcaa
     7141 cattttgcgg ataaggcatg ccgtgagaga taattgtaga ttctagcgca acgattgctt
     7201 ttccttctgc ttttgcttgt tttacttctt cggataatga taaataattt ttcatttgaa
     7261 ttcctccatg tctttttgta gttgggatgt cgataaattt tggcgaacgg tatactcaga
     7321 ttcgagtgtt cgcgcggcat ttacgctccc tgctcttaaa atttctttca atgcttttcc
     7381 ttctaaccat gcgtagataa ccgcggagca aaatgcatct cccgctcctg tcacgtctac
     7441 aatattttca attacaattg ctggttcaaa aatagtacct tcacctttgt ttgctgcaac
     7501 tgcgccttta ctgccatttg taacgatgac attttttacg cctagatcta accatttttg
     7561 tgcagctaag cgccagtctt cgtcattttt gatagtcatt cctaggtgcg tttctgattc
     7621 gtctcggttg caaattagcc aagttacatg atcaagtctt tctggtaaat gagacatttt
     7681 gggtgaagac acaggaacga gtactaatgg aattgaatta atttcagcaa agctgccaag
     7741 atattctagt gtttctttcg gacagtttaa atctgcaatg attgcgctcg cctgactcag
     7801 caagccttca ttttttgcga gtacatctgg agttaagtga tcatatgcat ccatgtccgc
     7861 tagtgcaacg agtaaatctc cattgttttc gagcactgct gtataagaac cagttgcgat
     7921 gcttgggaat gctgtgacgt aatctaagtt catatatgta ttactagcat ttttgacagc
     7981 ttcccagtca gagtctgttc cacaagcagt gagtaatata acttcttttc cgaggcgtcc
     8041 aaggttttcg cctacgtttc tagcaacccc gccagcactt tgtgttgagc gcactgggtt
     8101 tgatgtggct agttgggcct tgtctttaat ataaaacttc cgatcgacgt tagctccacc
     8161 tatacaaacg atttgtttgg cttcatttaa aatataagct tttcctaaaa tgcgaccttt
     8221 cttaataagg ccggaaataa ggtttgcgac tgtcggtctt gataaatcaa gtatgtcagc
     8281 aagttcttgt tgagaaatgt aaggattttt acggatggaa ttgaaaatta tctcttcctt
     8341 ttcgttcatt ttcgctttat tattctccac gatataatgc acctccattc caaacttttg
     8401 ttttattttc aaacacatgt ttattatata tgtaaatgct ttcttttgca aactaaaaaa
     8461 cgaaaatccg cttcttttta ggaaggaaat tttcgtttag gttcatttat tttgaagaat
     8521 agccagttca ctttcagtta aagggcggta ttcgccgagt ccaagtgact cgtctaattg
     8581 taaattcccc atcgaaattc gttttaaata gctgactttc ttaccacgtg cggcgaacat
     8641 tctttttact tgatggaatt tcccttcttg gatagtgacg tttatttcgt ttggtgtaat
     8701 aatttctaaa cgtgctggtt tgcaagtgta tccatcgtcg agttcaattc cagctgcaaa
     8761 agcttctaca tcagctagag taacatcacc atcaatttta gcgtagtatg ttttatctat
     8821 atgtttttta ggtgagagca aattgtgtgc gagtgtgcca tcgttcgtta taattagcaa
     8881 gccttctgta tctttgtcta agcggccgac tgggaatgga tcagtgagcg tgtcttcttg
     8941 cgcaagcaaa tcgatgacgg tttctgacac attatcctcg gttgcgctca cgacattttg
     9001 tggtttatgt agcataaaat agacgaattc ttggtaaacg actggtgttc catggacagt
     9061 tacttggtct ttatcagggt ttacttgggt tttgctatct ttctgaatcg tgccattgac
     9121 gacaactgcc ccagatttaa gcaaaggttt cacttctttt cgactcccga aacctgtatg
     9181 ggacaataat ttatctaagc gcatggtttc gctccttttt ttcttttatt gtaacaaaaa
     9241 aacgaagctt cctcaaaggt gctccgtttt ctttctatta tttagtttca acaacttgtt
     9301 tattttgagg tattgttaag ccgaggttgc ctcttaatgt cgtagctgga tattcgtttc
     9361 ggtataaacc tcgactttgc agaagaggaa taacttgttc cacaaaagtt tcaaacgttc
     9421 caggaatatc agaagcaata ataaaaccat ctgcagcatc attttggaac caaacatcga
     9481 ttaaatcggc tacttgttct tttgttccta taaaaggtgt ttttggcgtt gctgcttctg
     9541 ttgccacttg acgaagggtt aggtgccgtt ctttcgcttc ttttttgatt cggtctgttg
     9601 tgctttgaaa ggcatttttg ccaatatcac caaggtctgg gaatggagca tccaaatcaa
     9661 attgacttaa atcatagtcg tcgaagtaac gtgctaggta agttaccgca ttttctattg
     9721 gaattaggct agcaaattca gtatatttgg cttctgcttc ttccaacgtg tccgctacaa
     9781 ttgggctaat tcctgggaaa attcggactt catctgcatt tctaccagcc ttttcagcgc
     9841 gggctttcac atcttgatag aattcaatgg cttcttctaa ggaatcagaa tgagtgaaaa
     9901 tggcttccgc gtttttagca gcgaaatcgc gccccgtact agacgcgcct gcctggaaaa
     9961 caactggttc tccttgcttc gagcggccga tatttaacgg cccttcgact tggaaatact
    10021 ctccttgatg atttaaacga tgtaattttt caggattaaa gaattcaccg gtttctttat
    10081 tataagtgaa cgcatcctct tcccaagaac tccagagtcc gcgaaccact tttaaatgtt
    10141 ctgctgcaat ggtgtagcga tcgctgtggg ttgggagatt tttcttgcta tgatttcgcg
    10201 cggcgccttc ttgcggagaa gtgactagat tccaacccgc tcggccgccg ctaatgtgat
    10261 caagcgaaga gagctgtctt gcgagtgtaa atggttctgt aaaagaagtc gagaaagttc
    10321 cgacaagtcc gatgttttcc gtagactcag ctaatgccga taaaatcgta attggttcaa
    10381 aacgattaag aaaatgcgga atcgattttt cggaaataaa aaggccgtct gcaataaata
    10441 caaaactaaa taacccttgt tcggcaattt tggcgcgtgt cttataaaaa tctaaatccg
    10501 tacttgctgc ggggttgatg tccggatgtc gccaaccatc tgttgttccg ccaacaccgt
    10561 gaataattgc accaaactga attgtttctt ttctagtcat tttacttcct ccttttcaaa
    10621 caatgctttt tccaaatgtt ccaatccgat ttctgtaact gcttggtagg tccctttttc
    10681 aatatcgccg atttctacga ctgggacata acgaatgccg tatttcgctt gcagtacttc
    10741 tcgcaaataa tcatggtcgg tgacgtcgat atcttggaag acaatttttt gctcagttaa
    10801 ataatctttc acatctttac aataatgaca tcctacttta ctccaaacaa cgacgttagc
    10861 catggacaac ttcctccttt atcgattcac ttaataattg gtacgagtat cgcttgattt
    10921 ccgtagattt aactggtgtt aaaacaacaa aatcttggat attatattct tttgaaaggc
    10981 gtttaatctc tgctccgact tcttgtttgg ttcctgttat tgcaccaatt ctttgggtaa
    11041 taaaccggta tgtttggttg atatctttta cgtaggattc cgcttgttcg cgcgatccga
    11101 cattaactct acgtccgtcc gcaagctcga ctttgattga ctctcgctct ggaatatgtc
    11161 ggtctgctgc gattttagtc tcagctacta caacaattgg tgctagttgg aaactagctt
    11221 ttgtgtttat tcggtactgt tcaaatagct cgcgtgcttc ttttaaaaca gcttcttctc
    11281 catttataaa ataagcaaac acaaaggaaa tacctagttt ggcagcttgt ttcgcgctag
    11341 ctgcacttcc tccaagcaaa aatatctctg gtttgttttc tggaagtggt tttgctgcaa
    11401 tagccacctc tgaatgatgg gttacaaaat cgactagttc tttcaatttg gcatcaaagg
    11461 ttcgcgtagg ttttacgaag tctttttgaa gggcatcggt tgctggttga aatccgcctg
    11521 gcgcttttcc gacgccaagt gacatccgac ccggcgctaa gttctcaagc acatgaaatt
    11581 gttcagcgac tttatatgga ctataatgtt gtagcattat tccgccagat gcaagcttga
    11641 ttgtgctcgt ttttgcagca atatacccta aaagaacttc cggagctgcg ccagctattt
    11701 cgtctgaatt atgatgctcg gcaacccaga aacgatgata gccgagttgt tctgcgagtt
    11761 gcgcaagttc tacggtattt tgcaaagctt cactaggttt ttcgcctgga tttataatac
    11821 tttggtccaa aatactgaat cgaatcgtca tatgacacgc tcctttttca cttctttgat
    11881 ttcatataaa taatccgctg aaactcggtg taaaaagcgt tttgtccgtt cttctttggt
    11941 atgattaaac acttcatcgg gagtaccttg ttcgacaatt agtccaccat ccataaaaac
    12001 gacttgatct gccactcgtt tggcgaactc catttcatgc gtaacgacga tcatcgttgc
    12061 acccgcacgt gcaatctcta gcattacttc caatacttca ccgacaagtt caggatcaag
    12121 tgcggcggtt ggttcatcaa acaaaatgac gtctggatta atagcgagtg ctcgtgcgat
    12181 tccaacgcgc tgtttttgcc cgccggaaag ttgggaagga taggcactaa atttgtccgc
    12241 caaaccgact tttgtgagct ctcgttctgc tatttcacgg gcaatttttt tcggcatttt
    12301 tctagcgact gttagaccct ccatcacatt ttgaatgacc gttttgtgcg aaaagagatt
    12361 atactgttgg aaaaccatcg ccgtattttt ccgcagttgc aaaacttctt ttttggatgg
    12421 tttcttacag ttaattattt ggtcatgcat cgaaatttca ccattttcag gtcgttccag
    12481 taagtttagg catcgtaaaa aggttgtttt ccctgagcca cttgggccaa gtattgttac
    12541 tacttcaccc tttttcaccg ttaaatcaat tccttttaaa accttgtttt caccaaagct
    12601 tttttgaata tttttaattg taatcatact gttcctcctc gatatttagc gatatttttt
    12661 tccaagatat aattaatcgc ttcaatcaaa atagttaaaa accaataaat gagtgcggca
    12721 ccgataaatg cttcgagaaa cgcgtaattg tcggaagcta ctattgttgc cattccagtg
    12781 atttctggga ctgcaacgat ggcagcgatg gatgtggtat gtaaaaatcc gatgcacaaa
    12841 ttcgtgaaat tcggtagggc aatcatgaag gcttgcggta agagcacttt tcgaatcgct
    12901 tggccatgcg tatatcctac agagtaagcc gcttccattt gtccgatatc aaccgcaata
    12961 ataccggagc gcaaaatctc ggttaagtaa gctcctgccg tgaaagacag cgcgataatg
    13021 acaaaaataa cgaccggtat tttgtttgca gaaatgccta atccgaatga tttgctcaaa
    13081 aaatccacca ataggggaat gcctaggtaa atcagcataa tatgcagaat cgctggggtg
    13141 cttcgaaaaa aagaaacgta aaacttcgct atcggttcta aaaatcggac atgatacatc
    13201 cgaatcaacg tcatacctat agcgataatg aaaccgaaca atatcggaaa gaaagtcatc
    13261 gcaagtgtta acgggatagt ttttaacatt gccattacgg cggttccaat aaaaggcaca
    13321 tcaagcggca tcattatctc tcctttataa ctcgatatcg aaaatactcg tgaatctggt
    13381 gttttctttt ttaactcgtt tttcaatcca tttgaaggaa tattccagta agacggccgt
    13441 caaatagtaa ataattgata aagaaatata gacctctagc gcgtgattac ttagtgttat
    13501 cagcgtctga cctcttcctg acatatccat tactccaatc gaaaaagcga gcgacgtatc
    13561 tttcaaataa ccaatgacta aattgccaaa attcggtaga gcttgataga gtgcttgtgg
    13621 caagatgatt cgtaaaaacg tttggcgact actcagacca atactataag ccgcctctgc
    13681 ttgtccggca tccacgctgt tcacgcctgc gcgaatcact tcggcaatgg tcgctgcact
    13741 gcttaacgca taagtcgcaa tcgcagcata aaggggatcc atttgtgata aatcaatgcc
    13801 aacgatgctt gaaagtgccg ggattccgta aaaaacaata aatagttgaa ccataatcgg
    13861 cgtcccacgg aaaaacgaaa tatacactct ggccaattga tctaaaactg gtatcttata
    13921 aattcttggt aaagatagta gaacgcctaa tataaatcca aaaataagcg agagtgccaa
    13981 aatatacaac gtaatcggta aataaccagc taacgttgga ataaaatcag caatcatttt
    14041 cacatcgaac gctttatcca ttttaatggc accctccctc gtttaatatt gttcttttga
    14101 ataatctgcg ccaagccatt tttcacttaa ttttttaagt gttccatcat caataataga
    14161 ttgaagcgcc tcatctacat ctttgcttag tttcgtttca tcttttccga gcatgaagta
    14221 tactttcgca ttagatagaa catcgccaac tactttttct ttgatagcgc ttgttttatt
    14281 ttggaaatct accgcgaatg gtgtagaaat cgttgcatca gcgcggccag ttttcagttg
    14341 gttcgctgta tcatttgacc cttgaccttc ataagcaatt tcaaaattat tgccttgttc
    14401 ttcattaatt tttttcaata cgagcgcacc attcgatgtt gcgcttgtga taacgcgttt
    14461 tccagctaaa tcttttgtgc tgtttatgct gttattactg tctaataccg tcaattgtaa
    14521 tgggaaatta ttgtatgcta catcattaaa taaaaatttc ttctcgcgtt ctttactttt
    14581 ttccatttga tgcgcgacaa tgtctacttt tccagctcca aggctaacga gtaaattaga
    14641 aaaatccatc gttttaaatt taaatttata gccgggcaaa cgtttatcga tttcttttac
    14701 tagttcgaca tcataaccgg ttaatttccc attttcatcc aaaaagcaga catttggaaa
    14761 ttgtgttcca gtgccaaccg tgattgtttg tactttttga ttcgctgctt ctggttcttc
    14821 ttttcctcca catgcgctta atgttaatgc ggctgtaaga gccagtgcca aaatcccata
    14881 tttctttttc atcctttttc cccctttttt atgtccagct aggtattccg agtagtgtgg
    14941 catcgaattt ttccggaatt aagattttcc gcatcataac acccacatca ccgtcttcct
    15001 catgttcaaa gtagacctca taaccgcggc gtagatacat atccagcaac cacgggtgtt
    15061 ttctagcaga agttccaagt gtcagtgccg gtgcttttag cgtgtcgcga agtacccgtt
    15121 cttctacata cgttaataat ttatcgccaa tcccctgtcc tgcaagttcc ggtgccgttg
    15181 caaaccacca aacaaatgga tatttagaag gtggagagct gctctcccac ggaaaacgaa
    15241 cggtaatcgt agaaattaat ttgccgtttc gttctaaaac aaaagcagaa gaattaacaa
    15301 tattttctgt caccatcgct aaatccgcat tcgttgacgg ccaatcaatt cctaattctt
    15361 tcaccgattg aaaagcactc gacaacaatt ccaaaaattc cggcgcatca tccacagtcg
    15421 ctactctaaa aatatcttct gtcatttccc gctctcctcc ttaaacttcc actgattgtt
    15481 gatttaataa tgaaatgaat tggtttaaag caatatctag ccgttctttc gctgaagatt
    15541 caatttcata cagcccatcc ccgaaccgtt caatttgttt gtctaccgta aactgccctt
    15601 ttaatatcgt ttctgctcca agttccttca acacaggatc aagtgcgtat tgcagtgcga
    15661 gcaaatgtcc gtttgatcca ccaagtccaa gtggcaaaac gactttccct ttcaaagctt
    15721 tgagtggcaa aagatccaaa taggctttca acactcctga ataggctgct ttgaaaatcg
    15781 gggtagcaat aataacgccc gaacttgatt caatttcact atttgccaat tgaatatctg
    15841 aatgcgcgaa atcagcggtg actaatgctt ctgcgtttat tttatgcact tcgatgatgt
    15901 tcacttctaa accattcgtt actaattcat ttgctgctag ttgagttaat cctgtaagcc
    15961 tggattctgt tttgattccc ccagcaataa ttgtcacttt ccccatcaaa tcgccccttt
    16021 tcaatcccta tcaacttact tggtttttag atattagcta tactataaag taaaagattg
    16081 ggtttggcta atcaaaaaaa ctaatggcta accacagtaa tactaatact tctgcctgaa
    16141 tccgcattat tcctatgaat tttatcagat taataaattg cttctcctat ttttacagtg
    16201 tatactgtta gaaatatcaa aaaactccaa tatgaagggg gaattatatt ggaatttcga
    16261 accattaaaa ctttttatac ggtggttaat acgggaagtt ttcaacgcgc agcagaagta
    16321 ttaaattatt cgcaaccgac tatttcgatg cgaattaaac aattggaaca agacttagat
    16381 gttcagttat tcgaacgtgg caaaacttta aaactaacgc acgcaggtag attattttac
    16441 gaaagggcgg gccagctcat cgctcaatat gaagtactcg atcacacgat attcgactta
    16501 aaaaatggca acgccggcct tatcaaagtt ggaatttccg agcctagcgc tagtctcgtt
    16561 tttccgaaaa ttttaaaaac gtttctagcg gattttccaa agttaatggt gaatgtatcg
    16621 gtggatgatg cgaatacttg tagccaaaaa ctcattgatg gggaaattga ttttgcgatt
    16681 tgcggagaac cagagctgat tttggagaac ttctattttc catttttcca tgattcgtta
    16741 gatttaatcg tctcagaaag ccatccgtta gcttcacgta cttctgtgga gttacgtgat
    16801 ttacgcgatg aatgctttat cttcacaccg gcaaattgcc ccatccgcat ccaaatcgaa
    16861 cagcatttaa aacgtgctat tggtagtgat tataagaaaa tggagctcac aagtagtatg
    16921 tcacataagt attttgttcg tgaaaatgtt ggtgtatcta tctttactag caccgcgcac
    16981 tcagaactac ttgatggcac ggtccgcatt ccgattgaaa atttacccat ctcaccgcca
    17041 attggacttt taactaacca aaaagaaaaa gattttgaca gcacgacgaa agaacttatc
    17101 gaccggatta tttattattt tgatgataaa aaaagacagc taggctaaaa aattagctta
    17161 actgtctttt ttattaaaat tctaattgca tattcgcctc tatcgcaagt aaattatcac
    17221 gatacacttt catttctttc cgcgtaatcg tacctttttc aaagtagtgt tgaattgttt
    17281 cgcgctcaat ttgtgaagct aagtcaattg ttgtttgtag cgcttcatca ttgctttctt
    17341 ttttattttt cccacgaccc aatgctcgct caaaattcat taaataaagc gaaatgattt
    17401 ctgggttata ctcatttgaa tccagttctt gtagtttttg aatgacgaat agattgtttt
    17461 cattttgcag tttagcaatt tcttttctac gttcttcaaa agtaagaggc acaaatcgga
    17521 agtctcgaaa acgatgactt aataactggc gataccgcat tctcgctcgg tacttctctg
    17581 ctcgtgtttg gacgtagagt cgttttccaa gccgcatcat atgcgaaagt cccacaccag
    17641 tatcaatttt tcgttcaaat actaatcttc tcgtattttc aagttgccat tcttgcgtta
    17701 atcgccgcaa ttctttttca gtagcattta cttccttatg ctccatcaaa gagaaaatcc
    17761 gattattata catattcaac actttattca tttccactgt attttcatct gttttatacg
    17821 cctgtaattg ctgcacaata tcgcgaagta gtacaatatc tgtcgtatga tccgccgcaa
    17881 ttttgtcttt cttatctgca aaaagtggca aggtgaaatt ggccaaaagt agcgtcgtaa
    17941 taataactcc agcagcaata aaaataagta aatcacgctc aggaaacgca ttcccattac
    18001 caagaacaaa aggtaacgaa agcgcactga ctaatgtaat tgtcccgcga acaccagcca
    18061 cagtataaag aaaagtattt ttcaatctgc taaccaagtc cactttcgga ttttcctcgt
    18121 aattgcggaa aaacaagatc cataaaaacc ttagcccgag cagtaagaaa gtgattccta
    18181 gtatatacac gaatagcata cctttttgaa tattagcatc ttgccaaatc gtcatcaaaa
    18241 tttgcggtaa ttgtgtccct agtaagataa ataccaaacc attcaaacta aaaataataa
    18301 cagaccacgt gttttttgaa agcaagttca attgcgcaat ttcaggattt agtcccttgt
    18361 aactaaatga atgcaccatt ccgccactaa ctactgctaa aatcccattt actccaactt
    18421 tttcggctac cataaaaatt aaaaatggta acaaaatttc catcagcata aaagaagtca
    18481 tattttcgat tcctagctga cgtaaaccac gcattaacat gattttcagt aaactaaggg
    18541 cagctccaag cgcaatccca cctaatgaaa gaagcaaaaa gcttgttcca gctgacataa
    18601 atgagaatgt tccggttaca agcgccaaca cagcaaactg gaacgaaaca agtccggaag
    18661 catcgttaat aagcgattca ccttccaaaa tatgcataat tttatggggt actcttactt
    18721 tttcagccag cgcccccacc gcaacagcat ccgtaggcgc aagtgccgca gctaacgcaa
    18781 acgccgcggc aaaaggtatc gcaggaatta agtagtgaat aaacgcaccc agtaccccaa
    18841 ccgttacaaa cactagccca atcgataatg acaaaatagc cttccgattt ttccataaag
    18901 atttcttatc cgtactcgcc ccatcgttaa aaagaatcgg cgccataaat aataataaaa
    18961 ataattccgg atttaaatcc atcgtatgat ccccaagcgg aatcgccaaa ataatcccta
    19021 gtattacttg aattaaaggc actgcaatcc ccggcaaaaa tcggcttaat acattagaca
    19081 aaaacaccgc gctcaacatt aataaaatca gttcaaatat ttccattaat acatccctcg
    19141 ttcccgtatc cgtgccactg agtcagaagc gtggcatttc ttccgttccc atattagcaa
    19201 aaaaactttt cagaaacatc cgtctctgta tggagtttcc tagctatttt tacttcttct
    19261 gatagacaat ttgttcgtct acaactgtca tcatagcgct cacttgacga aggtctgctt
    19321 gtttcatttg aaatggatct tctgccaaaa tcgtaaaatc agcaacaaaa cctggtgcaa
    19381 tttgtccgcg tgtagttgtt ttgtagcccg caaatgccgc gccttttgta tatagttgaa
    19441 tcgcttcaaa tacagtgagt gcctgctctg gccaatattc tactccatcc aaatctgcat
    19501 tcgccgttct agtaacagcc gcatggatac cccaaaacgg attcggcact tcaatcggcg
    19561 catcgcttcc tccagctagt gggaaaccag cctgtagaag cgttttccaa gcaaaagcta
    19621 gcggtggatg attttctcca agtacttcta gcgcccacgg aagatcactc gtcatgaatt
    19681 gcggctgtat atcaaatagc acaggtaacc cggccgcttc ttctattagc gcttctgtaa
    19741 gccaaggtgt gtggattagt ctgtcgtatt gcccttctct aggcggattg gcacgtaacg
    19801 ttcgaataac attagcaaag gcttgatccc ctaaaatatg aatagcaaca ggtaatcctg
    19861 cttttcgcgc cgctttaacc aaatcttcaa acgcttgatc agaatgaatt tgcagtcctt
    19921 tttcatcaga gttatccgca tatcccgcac tcatcaacgc cgttcgcgag ccaactgttc
    19981 catcatagaa aattttcatc gcccctaatt ctaaaaaggc atccccactt acgaaacttt
    20041 cattagaagc cgaaaaagca gctagttctg cgtggtgaac cagcaaatgc gcacgaaacg
    20101 gcattttatt agcaccaata gtatttcgaa aagcagctaa agtcgaagtg aatcccgtga
    20161 aataatgtaa atcttccgag tgtgcacccg ttatgccttt cgaccacaga tcagttatcg
    20221 cgattttaag ccatgcgctt agttcagaag gcgttgctgc agggaaagaa tctatcgcca
    20281 tagtcgttgc attatctctt aaaatccccg taaaattacc cgctttatca cgaacaattt
    20341 cgccgccacc atcaaaacca ttttccgaaa aatcggcaat atgcgcttgt aatgcagaat
    20401 taatagaaac actatgataa tcaatgcgcc gaactaaaat cggatttgtc tggcttactt
    20461 catctaaatc ggccaaagaa atcaacgttt gctcatctga ccatttattt tcatcataac
    20521 cttccacaaa caaccattca tcactagcaa gttgctttgt tctttcagca atcagggcta
    20581 gtgcctcttt tttagtagtg gtttggttta aattaagacg ttctaaagct tgtccatacc
    20641 aaagtaagtg aatatgcgca tcaacgaacc caggaaatac cactttctct tctaaatcaa
    20701 tcgtttcggt aatattagcc gcatgttgtt tttctagttc tcgtgcttct ccaaccgcat
    20761 aaatatgacc gttttctgtt aataccgcag aaacttgatc cccttcagct gtcatttggt
    20821 aaaaggtagc atttttccat aatttcattt tttattcccc ctgattgacg gaaattttca
    20881 aagctgcttt atcttgttgg tcctttttct gtaaaatttg ttgtagtgta atactaatta
    20941 atgcgcatcc gagtaaaata aatgcgccaa taaatagagc tttaatgcct ccgagatttt
    21001 gaacgacaat tgctcctaaa aatggtgcta gcatgcgcgc tgctgttgcc atcccgttca
    21061 caagaccttg atacaagcca gccgctcctt ttggtgcaag ttgataagca atcgttggaa
    21121 tcgctggcca agcaaacatt tccccgagcg ttaagaaaat cattccgagt acaaagccac
    21181 tataaacact tgcattcatt gcgactacaa aagataagat aaataagaaa ataccgatat
    21241 aaatttgtgc gagtaaatat tttttaaatc tgtttacaac ggggattaaa atgagctgac
    21301 caagtacaat cagcgcgcca tttaaactcc ataaatttcc gtattcgctc gatgtcacac
    21361 ctttgatttc tgtcatgtac gtagataaat tcgactgcca ctgcacatgc ggcaattggc
    21421 aaagcaagta tgtcaataat aatagaataa aagaacacaa agctagttta gtcggaaatt
    21481 cgagtttagc gccttttttg cgatgttttg tttctgcgct tactcgctcc gatttccaat
    21541 caatcttgtg gaaaaagaaa aagaaatatc cagcgaaagc aatcgcaaat acaaaagaac
    21601 caatgtatac atgactcatt ccttgtttcg ctagaagccc tgcaagcaac ggaccaatag
    21661 ccacgccaat attttgcgcc acataaatcg cattaaatcc agttcttcct ccagtcggat
    21721 gtgttaaccc tgctgctgcg tataatccag agaagaccat ccccatcgcg ataccaaccg
    21781 cccacaaatt ccaaataaag aatggaaatc cgtgaaaaaa gcacaacgaa gcagttgaaa
    21841 gcactaatat aatcgttcca atcgtaagtg aaataaaacc agaaaaccgg tcaaaaataa
    21901 gtccgccgat aatactagaa acaatcccca ctccagaatt tatcaacaac actaatgaag
    21961 cgtccgttgt cgacatccct aactcttgcg tcatgtaaat catattgaaa ggccaaataa
    22021 acgatagccc tgtatatagt aacaccatcc caataattac aatccataaa tcctttggta
    22081 accattttgt catttcctac actttccctt cattaaaact cacctttttt agggtatcac
    22141 aaccatccac attcgaaaag aaaaacttca tcaaaaaacc acctagcaaa ttttgctggt
    22201 ggctaataag ggactggcga taaatcccta tcatggttac ttataagtgt actatgaatt
    22261 cgaatttttg tctgtgctaa attaagaaat atttcaatta attttttgta aaactttttt
    22321 ataggctaag tctctcaaat aattatgaaa ttgtaataca tctatttcaa ggtaatagcc
    22381 taattcatat agaatatgtt gctgcttcaa ttcttttact tgaaaagcac atatttcttt
    22441 aggaacaact tgcataatct cttgtctaaa aaaatctaac gctactttcc aggaagttgt
    22501 atgtaatctc aaaggcattt cttgaatgaa ccactgaatg caatcaattt catttcgatc
    22561 taaaaaattc ttttctatca tggttaaatc agcaacctta atcttaccca tacttttcaa
    22621 gatatccttt acatatgtta aaggaatttt ccaggctacc gttttagaga ggggatggat
    22681 ttttgtctct tctcgagtaa aaccaagaat gcttcctttt ccccaagaac tatttcttgc
    22741 agcacattgt gttacatttc cctcgtcaat tgcatacaca tattcattgt tttctgggca
    22801 atgaacaatt tcctcctcgt tccaatacac caattccgct acttcttgaa accttggatt
    22861 attagttaac gtaaacatta attccgttgt aaacctttcc tccatttatc ccgcctcctc
    22921 aaaatcctca catcaattca tctctcttta tcataataaa aaaaaagcga gcaaagagtt
    22981 ctcaaagaac catcttctcg cttcttatgt ccattttgtg acaaaatcac tttttcagtt
    23041 ttattaatgt aattttctta gcattttaac ggaaaataat ataaaaaatt atctttattt
    23101 ccgagattca ccttttcgaa taacccacca aagagaaaga catgtaatac cttgaaaaat
    23161 gaaaaatatt ccaagtataa tcccaactgc aatcgctact agcatgtttg tgaacaagga
    23221 aataacagca ataatcaatc ctataattcc catgataagt agtactgtcc atcctggtaa
    23281 accttttaca gcaaacgccg ttaaaatacg taatatcgct gaagctagta tccaaatcgc
    23341 gaatataata atgaaaacac gttccgccat atttgactcg aaaatagcaa atccaccaat
    23401 aaggattgat aaaatcccat caaacattat ccatttggaa atactccaat atttttgttc
    23461 tccaaaataa gaaatcactt cattaatccc atttaaaact aaaataatcc caataaaaat
    23521 agttagtgct tgcagtgaag tacttggatt aaacattaaa taaattccaa gaccaatcat
    23581 cgccacaccg agaattaaaa cgaaatacgt gtataacttt ctcatggttt tgcccccttt
    23641 ttagtgatta gtaagtaatg accctgccgc ttcatcaata ataaatacga cattcggatg
    23701 gttacgtaaa atcgacgctg gacaactttc atcaattggt ccctcaagta aacctttaac
    23761 ggcttctgct tttcgttcac cagaagcagt gactaagatt tgttttgcat ccatcatatc
    23821 agctaatcca agtgtaagca tttgggatgg cgcttcgtct tcttttaagt tgttgtacat
    23881 gatggtgctt ttgatagtag attcatcgct atctgccaaa aacaatcgcg catcaaatgg
    23941 tgttccgggt tcattagccc caagatgtcc atttacccct aagcctagaa tttgcaaatc
    24001 gcgctcattt tcagccaaaa ttttcttata gcgggcaatt tcgtcagtaa agtcagctag
    24061 gcttccgtcc aataattcga ctctttttgg cattttgtta attaaatcat agaatttttg
    24121 gtgcatatat gtgtaaacag tgaaggaagc atcgcgttta gccacatact catccaaatt
    24181 cattaaaaat actttttcga ttggaatttc gcctgcatta attcctttta caagtccctc
    24241 gaacattcca tcaaaacttg ctccggtagt tgtattaatt accggattat cattttcgtt
    24301 aatgacttgt ttgacaactt cgagcgcttc ttgtgacatt tcttcgtatg tttttgtcct
    24361 gattaatttc ataaaaatcc tcctctataa gctttcatta cccgaactat tttttctaaa
    24421 gcaaaccatg ctttagaaaa cttgcgtata acccatcttc ttcaacggat tttgttactt
    24481 catctgcaag taattttagc tcttctttgg cattccccat tgcaatacca gtttcacaat
    24541 aagtaagcat ttctgcatca ttcattccat caccaatgcc aatcgtcgtg ttcttctctg
    24601 caccgatatg cgctagtaga aattcaatcg ctgttgcttt atgaatatct ggcaccatca
    24661 gctctccact atcgtcccca aaaataggaa ctgtgcaatg taaaacttca aatttgccac
    24721 taaattcatt ttttatttct tcaaaaggta catttttatt ttctaggaaa caagctttat
    24781 tgacatctgt gcggtaaaga tttgtttcac cgtaagttag gcttgtcatg aaaggatgcg
    24841 gattattggc ttttttctcg cgcgcaatcg gatcattctc gacatcgcca taaactaagc
    24901 tatctaaatg agcttctaga ttttcgcttg caaatagccc accgtttgac tccaaataga
    24961 aatctaagtt cttttcatga aagaaatcta ccatatgaac aacgtcttca ttcgctactt
    25021 ttttatggta aacaatttca tcgtctactt cgatatagcc accacctgca ccaataatcc
    25081 catcaaaccc gatggataaa atcgagtcat acagctctgg tttagaacga ccagtgcata
    25141 gatagacttg gtgaccattg tttctagctt ttattatcgc ggttttggca gatgctggaa
    25201 caagcccatc atccgttaca agcgtaccat ctacatctac aaatactatt tttttcgtca
    25261 tgcaatacct cttttcgtat gttaatagtt taattatagc atttctttaa taagaaggcg
    25321 ccccatcgcg taacaaaaaa gcaagattcc cattttcagg aaaccttgct tttaatttat
    25381 ttagttttct aaagccatta atttttgatt atcatcaaga gctgactcat gtgcatcatg
    25441 gcgttttttc aagtggctca tagatagata tagtaagcca acacatgcga tcatgatgat
    25501 tgtaagaacg agcatcgaca tactgtatac atttggtccc atacctgctg ccagtgactc
    25561 tctgaacgca taaatcgagt aagtcattgg taagaacgga tggattaaat tgaagaacca
    25621 tccagtaagt ggcattggga atgttccgcc tgatcccgct aattgaacaa tgagtaatac
    25681 catcgcgata aaacgacctg gattatcaaa tgtcatggca aggagcatga taaggaacat
    25741 gtaagcaaga gctgtaataa tcgctgttcc aaagaattca acaatgttat ctggtcttag
    25801 tcctagtgct atcatgatac caccttcaag aagtgccatc gcaactgctg cgacaaaacc
    25861 aagtgatagt ttacttaacc accatttata agctggttgt ccttccatcg aaacacgtct
    25921 gattggcatg atgaagttaa agacaagtgc accaacatat agagctagtg ataacacata
    25981 tggtgctaat gcatgtccgt agttacttac gtgcgtatat tcattatgtg cgagttttgt
    26041 tggagcagca atcatgttaa atgttttgtc tgttgctttt gtatctttga cttgttgtgc
    26101 tccgtctgct agtttgtctg ttaattctgt gctgccgtct gttaatttag taagtccatc
    26161 tcctaattgg aaggaaccat tcgctaattt ggaagaacca tcggcaattt tggaagagcc
    26221 gtctgctagt tgtcctacgc ctgaaactag ttttggtgag ttagctgata gttggtttag
    26281 accgcctact aattggcttg aacctgcttg tagttgatta acgccacctg caagtgttgg
    26341 aacttttgca gctaattggt ttgttccgcc ttgtaattct gttgctcctg agcgtaatgc
    26401 gccggaattg cttgcaagtt gattaccacc atcatttaac tgacttagcc cgttttccat
    26461 atttgcacta cccgcagcga gttgtcctac gccagaagtt agggttggca cttggttgtt
    26521 aagttgattt gttccagcaa ctaatttggc attcccagct tgtgctgatt tgagtccagc
    26581 agttagttgg ttcgcgccgc caagtagagt ttgactacct gagccattaa ttgcttggtg
    26641 aatactgtta aatgcttcgt ttgttccacc gtgaactgct tgataaccag cggaaatttt
    26701 cgctacgcca gtttgcaatt ctgttacttg tgtttgaatt gccgctaaat caagacctga
    26761 taagccgctt tgtagttgtt ctactgttgc tacttgtgta gcggattttt gtgtttcttt
    26821 atctaaatcg gcttgaatag catcaataat tttttgttta tcttctgcac tcacgccagc
    26881 tgtcgcatta atttttgatt taattgcttc agcatcgaag ttcgcattag atttaataaa
    26941 tgttaagcca ttttgtaggt cgcttaaact tttttgtagt gcagcgagtt gttttgcaag
    27001 tgctgcatct tccccgttga cacttttatt taattgatca attccttgtt gtaaatcgtt
    27061 catgccttgt ttcaattggg caattttgcc ttgtttatca gttaaattac cgtctaattc
    27121 tttaagtcct gctgaaagtt tgttacttcc atcgactagt gaatctaagc cagttgctaa
    27181 gcttttttgg ccgttattta gttgtgttat gcccgatgct agagttggta cactgccatt
    27241 catcttattt aatccatctg aaagtgcagt agaaccagtg taagcttggt taattccgcc
    27301 tgctagtgta tctacaccag atgtataggt agaaactccg ctagctaatt tcgttgcccc
    27361 gccgtcaagc gctgctacac cgtcttttag tggtcctact ccagctgcaa gtgtcgaaac
    27421 accatcattt aatttatccc caccagcggc cgcagtgttt acaccatctg tgtaagtttt
    27481 caagccaact tctaacgtat tagcgccatc tttgaacgtt aaagagctat ctgcgagcgt
    27541 ttttaaatta gtagaaatcg ttttattacc ttcttgtgat ttcacaaggc catctttaat
    27601 ttttccagag ccatctgcag cttgggcgaa cccttcacca gactctttaa ttttatcaaa
    27661 aattgcttcc gcgtatgatt ttgttacttc agcggaaacc tcgcttttca gttgtttggc
    27721 tccttgttca ctcacgactt gacctaaata gttcagcgag ccgtttgttt tataggataa
    27781 ttccattttt ttcggatctt tatctaaaac ggatgctgca tttttagaga aatcttttgg
    27841 aatcgtgaca atcatataat atttgccatc ttttaagcct tgttccgcat cttctttgga
    27901 aagaaaattc caatcaagtt ctttgttgct tttcagtttt gtgactaact gatcaccaac
    27961 atccattgtt tggccgttat aatcaaccgg tttatcattg ttaactaccg ctactggtaa
    28021 atcccctgtt ttgccgtacg gatcccagac ggattttaag aaaaagcttg catataaaag
    28081 tggaataaac agaataacta caaatgataa aagtagtatt ttgtttttaa ataatttctt
    28141 ccactcattt tttaccatat ccattttatt accgcacttc tttcttttaa agatttatta
    28201 cgcttcgttc caatctatga tagtggttcg ttctttccca ataacttgct ctactaaaac
    28261 agataatttt tgtgagtata aataattagc gtattcttta tcagcgtttc taaaagcact
    28321 tgtaatggtg tgaataccgg actctgcaaa ttcatgatag tcagagaaaa cagtgtggat
    28381 taagtcggaa tctgggtatg tatcgatttt cccttccact gcttctacaa tatccagcaa
    28441 attaatttct tcagggtctt tagcaagcgt gaaaccaccg ttattacccg aaactgaatt
    28501 aatcagcccg ctaacgacta gcttcctcaa aattttacta atataagacg gcgacgaatc
    28561 acgcaaacgg tgatgaatag ttacggaaga aatgggaaca tctaccttct gggtgtacaa
    28621 catcgtcata atacaaaata cctgatccat acttttgctc aacttcataa taaaaatcct
    28681 ccctcttccc attattacct ttcaatatcc ttaatggaca tttaacatct atatacaata
    28741 cacccatttt ttttaaagtg caagagtttt ttactaaaaa tggaaaaaat tttaatgaat
    28801 gcgtttgccg tgaataaaac aacctcaagt actgtctcaa aaattttcct tagccaagaa
    28861 aaaaactgga ataattttcg aaaacaaacg tgctaatctt atacatgttc caacaaacaa
    28921 tgacttagga ggtgcttttc tcgtgttaac tgatgatgtt ccaaaaaaat cacatttacc
    28981 attaattaag catcattcta attacttata gcttcgttta gttgtatttt cgcaaacaaa
    29041 aaattgggag gtactacaca atgtctaaac aagcaaagtc tttaacctta ttcggatttt
    29101 tcgccattac ggcttcgatg gttatgacag tttatgaata tccaacattt gccacttccg
    29161 gctttcatct cgtatttttc ttgctacttg gcggattttt atggttctta cctgtcgctt
    29221 tatgtgcagc agaaatggcg acagttgatg gctggcaaga aggcggtatt ttttcttggg
    29281 tgggaaatac actcggggaa cgttttggtt ttgccgcaat cttctttcag tggtttcaaa
    29341 taacggtcgg attcgtgaca atgatttact ttattcttgg cgcgctatcg tatgtatttg
    29401 attttcccgc gctcgaatcg aaccctttta ttaaatttat cggtgtttta atcattttct
    29461 ggggacttac tttttctcaa ctaggtggta cgaaaaacac ggctaaaatc gcaaaatttg
    29521 gttttattat cggtattctc atcccagcaa tcattttatt tatcctaggt attgcttatg
    29581 ttgctggcgg aaatcccctt catgtcgctt tttccaaaga ggcgtttatc ccggatttct
    29641 caaaagcttc aacattagtc atcttcgtgt catttatact cgcttacatg ggtgttgaag
    29701 cttccgcgag ccacgtaaat gaaatgacca atccaaaacg cgattatcca ctagcgatga
    29761 ttatgctcgt tattttagcg atcgcactga atacaatcgg cggcctaacc atttccgctg
    29821 tgttaccttt aaaagattta tcccttagct ccggtgtcgt ccaaacattc caagcgctaa
    29881 ttctgcactt tggttccggc ttaggatggg cagtaaaact gattgccatc atgattgcac
    29941 ttggcgtcat gggtgaagtc agtgcctggg tagtcggccc ctcacgcgga atgtatactg
    30001 cagcagaaca aggcttactt ccagaaaaaa tgaaaaaagt aaataaacac ggtgtccctg
    30061 ttccacttat tatggttcaa ggcgtcgtcg ttaccatttg ggcagctatt ctcacattcg
    30121 gcggcggcgg aaataattta tcattcctaa ctgccatttc cttaaccgta gtcatttatt
    30181 tagtcggcta tttactcttt ttcatcggct acttagtact tattttcaaa aaatcaagct
    30241 taaaacgcac ctatcaaatc cctggtggca aaattgttaa agtgattgta gcgctaatcg
    30301 gcttagtaac atccgttttc gctttatgta tctcttttgt tccaccagca tccatcgccg
    30361 caaaaagcga cacgacatac atggttatct tatcaatcag ctttatcgtc accgtactaa
    30421 ttccatttat catctacgct gtgcacgata aaaaagacat ctcaccgaaa gatattacac
    30481 atttagaatc aagcgacatc aataaattca cccacccaag agctcgtggc gaacacatta
    30541 ttaaccccga cgaaaaacat attatgaatc aagacaaatt ataggaggaa aaaatcatgt
    30601 tatatagtaa agaaaataaa gaaagttatt tagaaccagt tttcggatca agtgcagagg
    30661 atcgtgatat tcctaaatac accctcggaa aagaaccact cgaacctcgg attgcctatc
    30721 gtttagtaaa agacgaactt ttagatgaag gttctgcccg tcaaaactta gctacttttt
    30781 gccaaacata tatggaagac gaagcaacca aattaatgtc cgaaacacta gaaaaaaatg
    30841 caatcgataa atctgagtac ccaagaacag ctgaactaga aaatcgttgc gtcaatatta
    30901 tcgctgactt atggcatgca cctaagaacc aaaaattcat gggaacttcc acaatcggct
    30961 ctagtgaagc gtgtatgctg ggcggaatgg caatgaaatt tgcttggaga aaacgtgcgg
    31021 aaaaacttgg cttagatatt tatgcgcaaa aaccaaacct cgttatctcc tctggctacc
    31081 aagtgtgctg ggaaaaattc tgtgtctact gggatatcga tatgcgcgtt gttccaatgg
    31141 ataaagacca catgcaactg aataccgacc aagtccttga ttacgtcgac gaatatacaa
    31201 tcggcgttgt cggcatcctc ggcatcactt acacaggccg ctacgatgac atctacgcac
    31261 ttaacgaaaa attagaagaa tacaatagca aaacagatta taaagtctac attcacgttg
    31321 acgcagctag tggtggcttc ttcacaccat ttgtcgaacc cgatatcatc tgggacttcc
    31381 gcttgaaaaa cgttatctcc attaatactt ctggtcacaa atacggcctc gtttatcctg
    31441 gtatcggttg ggtcctttgg aaagatgaaa gctacctacc agaagaactt atttttaaag
    31501 tcagctacct tggcggagaa atgccaacca tgcaaatcaa tttctcccgc agtgcgagcc
    31561 acatcatcgg tcaatactac aatttcttac gctacggctt cgaaggctac cgcaccattc
    31621 atcaaaaaac aagcgatgta gcacaatacc ttgcccatgc agtcgaacaa accggctact
    31681 ttgacattta taacgacggc tcccatttac caatcgtctg ctataaatta aaagacgacg
    31741 ctaacgtaaa atggacatta tatgatttag cggaccgcct ccaaatgcgc ggctggcaag
    31801 ttcccgcata cccactacca aaaaacttag aaaacatcat catccaacgt tacgtctgcc
    31861 gcgctgacct cggtttcaac atggcagaag aattcatcca agatttccaa gcctctattc
    31921 aagaactaaa caacgctcac atcctcttcc atgataccca acaatccggc gtccacggct
    31981 tcacacatta ataaaaaggc tagcctctca aataggctag ccttttttca tgttctttta
    32041 ttctaagcga ctgaatcgcc ctttctacat ctacaagatc tctgtcaaaa aaagccaaag
    32101 aaatcggaat aatcatccca tctaccgctt ccttcaattc catttcacag ttcggatggc
    32161 aaagcacaat cgttggctca cttgactccg ttaaaacctg gttcaactcc tccactgaat
    32221 taaacatcgt ctcatgcacc gtcaccttcc gccccagctc ctgctccacc tgaaacttac
    32281 acgactcgaa attaattaaa ttaaaggaaa aaatacaaat ttgcaccgga ttgttccatt
    32341 tataaatcag tggatacaaa tgaatcgtca aataattaat gtgcgaatca attaataata
    32401 ctcgatattc actagcctca ttccagcgct ccaaaacatt tttcacaacc atataaagtg
    32461 gctcatactt tttatccagt aatcgctcat tactcggaat aagtccctgc aaattaaaca
    32521 acgtcttctt caaaaagtaa caaagtgccg cccgaaaaag cgaatgatta acaacctccg
    32581 gaccaaaata ttcctcaaat aaatcaatca aaacttgtaa atccgcattt ttcattatca
    32641 actcattaaa ctgctccaac tccacctttt tcatggaagc atcaatgata ctaaaattag
    32701 tcgaataata aatcagcatt aaatacaagt aatcattata tgaaaattcc tgaccaagct
    32761 ctttttcaag tgtttcctta ctacttttcc gaaccatagc aagaaagctt gaagactcaa
    32821 tatatttttg acactgttca tccaatataa ttgcactagt cggaatatcc ctcttaaacg
    32881 ccatcgaaat cagcgaccga aaatacgcat gaccttccgc attatgcgcc aacgtatcaa
    32941 tattaatccg caaattcaac gtcgccataa agtcatcaat catttgcttc tcctcatcca
    33001 aaagtggata aataagcaca ccatattctg cttgaagaag cgcaatcaaa taccgaaccc
    33061 ggtactcctt cccagtaatt cgattattat caagtgtcaa atcaatttct cgaagaaacg
    33121 cctctacctt gtgcttcaac cgatacgcat gcgaatgaga aataaaatac gtatccataa
    33181 aatctgtgaa tttgcgctcc tccacattcg taacaaaaaa cgccacacat ttcaaaaaca
    33241 tcgagttatc atataactta tacaaaactt tccgttccgt cgccccattt tgcaaccgac
    33301 attggtatac ccaattatcc acacattctt tcatctgaat aacaatcaag ccatccaatt
    33361 cctcattcaa cgcatgaata tccgacctta ccgtcacccg agaagtctcc atatattccg
    33421 caatttcatc taaattcgta tgtttattct ttagtagaaa atcacaaatc aaacattttc
    33481 tcttaatatc cttttcgata taatttgtaa gcataactat cctctccgtg aaagattaat
    33541 acacaacaat tttcgccttc ttaacatgtt aatttaatca cataaaattg caacttctca
    33601 ctatataaat ttttttaagt agagttatat cattaatttt ttgtaagtgg tataacatgt
    33661 cattaaactc cgtcaaaagg tccttttgat caagaaaagt aatatttcca ttttttgtaa
    33721 tttatccttg aaagcatgta aatatacgcc tttcctgcta aattattttt tctcgtcttt
    33781 atttataaca caactttcaa gcagaatcca tctttgaaat aaaaaatacc aacgaatcgt
    33841 tagaaacgtt ggtatcatag tataccggcg gccggggtcg aaccggcacg cccttgcggg
    33901 cacaggattt tgagtccagc gcgtctgcca attccgccac gccggcgtaa caatataata
    33961 aattataact ttaaaacatt aattatgcaa atggaggcgc caaccggatt tgaaccggtg
    34021 ataaaggttt tgcagacctc tgccttacca cttggctatg gcgccgcaca atgttcaatt
    34081 taaaagcgga agacggggtt cgaacccgcg acccccacct tggcaaggtg atgttctacc
    34141 gctgaactac ttccgcatta actgggccag ctggattcga accaacgcat gacggagtca
    34201 aagtccgttg ccttaccgct tggctatggc ccaacaatta tattagactt aaaaacaaaa
    34261 agggcggatg atgggaatcg aacccacgaa tgcctgaacc acaatcaggt gcgttaacca
    34321 cttcgccaca tccgccatta ttttaatata tggcaggggc agtaggaatc gaacccacac
    34381 tggaggtttt ggagacctca gttctacctt taaactatgc ccctataaaa atggtggagg
    34441 ggagtggatt cgaaccaccg aacccgaagg agcggattta cagtccgccg cgtttagcca
    34501 cttcgctacc cctccatatt aaaaaagaaa aaagtggctt gggacagaat cgaactgccg
    34561 acaccttgag cttcaatcaa gtgctctacc aactgagcta ccaagccata atggcggtcc
    34621 cgacgggatt tgaacccgcg atctcctgcg tgacaggcag gcatgttaac ccctacacca
    34681 cggaaccact ctattgcggg ggcaggattt gaacctacga ccttcgggtt atgagcccga
    34741 cgagctacca gactgctcca ccccgcgaca ataatattat aaaattaatg gtggaggtta
    34801 acgggatcga accgctgacc ctctgcttgt aaggcagatg ctctcccagc tgagctaaac
    34861 ctccataatt actattttac tctaaaaaca tgaaaatgtc tctagtaagt ttaataataa
    34921 atgacccgta cgggattcga acccgtgtta ccgccgtgaa agggcggtgt cttaaccgct
    34981 tgaccaacgg gcctaagtga aaatatgatg cattattatg tgtaaacgga gagcaaggga
    35041 ttcgaaccct tgagacagct tacaccgcct acacggtttc caaccgtgct ccttcggcca
    35101 ctcggacagc tctcca
//
LOCUS       DASDYK010000017        34472 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.017, whole genome shotgun sequence.
ACCESSION   DASDYK010000017 DASDYK010000000
VERSION     DASDYK010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 34472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34472
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.017"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            188..547
                     /locus_tag="U0308_000864"
     CDS             188..547
                     /locus_tag="U0308_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEM2315839.1"
                     /translation="MLKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEAVKKYDE
                     VKPDIVTLDITMPEMDGLEALAQIMAKDPSAKVIMCSAMGQQGMVVDAIKKGAKDFIV
                     KPFQADRVLEALEKAAK"
     gene            567..2423
                     /locus_tag="U0308_000865"
     CDS             567..2423
                     /locus_tag="U0308_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HEM2315840.1"
                     /translation="MTTNMLDLFIEEASEHLQALNDNLLQLEKDPTNGQLVSEIFRSA
                     HTFKGMSATMGFQQVADLTHAMENVLDEVRNNRLAVTEHLVDIIFTCTSHLETMVSDI
                     QHGGQGAADISKTVADLEALLHPEQETDLAVEKTYRIQIRIEEAAILKAVRAVMCLER
                     LAEMGIISETTPDREAIELEEFEQSFEVVLESAQTKEEIEAVVLDISEIEKVTVTEEV
                     EEVQVIEPIKKAAKQTTKRLENKTIRVQLEKIEKLMNVFEESVIERARIDEIAEKTNN
                     KELMEHLGRFSSISKEIQNGLLNMRMVPVDSVFNRFPKMVRTLAKELGKKIDLVIEGA
                     DTEVDKIVIDEIGDPLVHLIRNSVDHGAETVEVRRKNGKNETATINLKAFHSGNNVVI
                     EIADDGAGINKRKVLEKAIAKNVVTRAESTKMTDAEIFDLLFDSGFSTADQVSDLSGR
                     GVGLDVVRNTILKIGGKISVESSENAGSTFRIEIPLTLSIIQSMLVATSERRYAVPLA
                     NVAEAITINPADIQHVHGKDLINYRETIIEVLDLGECFHETPLNDTDELLLLVVKNAK
                     RTFGLIIKDIIGQREIVLKTLGGFFSESQIAFSGATILGDGRVVLILNLETF"
     gene            2436..2735
                     /locus_tag="U0308_000866"
     CDS             2436..2735
                     /locus_tag="U0308_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HEM2315841.1"
                     /translation="MEQVFQVELPEWEPKEPSQEGREKGSIRQVDNIGVNLIVRLGKK
                     EMPVGDIAELSIGDVLEVEKKPGHKVEIFLDEKKVGIGEAILMDENFGIVISEID"
     gene            2754..3164
                     /locus_tag="U0308_000867"
     CDS             2754..3164
                     /locus_tag="U0308_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315842.1"
                     /translation="MKQEAYNAVKMKVDQEKTAILKELQLLLSKREKVVEKLAHEKEV
                     YYSRTKKERLQVAVLAGSMQLDAFSPSRIQQMEREIHQISQYIKSNEQILEQLEEKGK
                     QAKKMYDDTRKKWQQLENKREEQTLRDLKMVLLK"
     gene            3180..4226
                     /locus_tag="U0308_000868"
     CDS             3180..4226
                     /locus_tag="U0308_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEM2315843.1"
                     /translation="MLIPDNLLQPLVGKKQVEPKESLAEELVELPFISLLMENSPAPL
                     LKGEADNGEQATLPLKEIAQPLVSAKLLDDAPETKLQVAPLELKEVKETLAAIAKQAI
                     DQPKIENAPQAVETPVTNTPKEPTKNASREQQPPPELIIPTKESPKLAENVAKNQPVL
                     AKLPQEKEVVQLFKASIKEPVTAKEEVAVKKPAESSNIWHDTAKQLTPAAKPEVPVTL
                     KQLDKTITDQIEQLQKFQVKQNKAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTA
                     KQKLEQMAQDLHNRFRDRGVEVAVTMTEKQAPKENNQGSDGRHQGESKKEKERENPHQ
                     ERAKQEAFDLEEET"
     gene            4228..4650
                     /gene="flgD"
                     /locus_tag="U0308_000869"
     CDS             4228..4650
                     /gene="flgD"
                     /locus_tag="U0308_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464223.1"
                     /note="acts as a scaffold for the assembly of hook
                     proteins onto the flagellar basal body rod; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook assembly protein FlgD"
                     /protein_id="HEM2315844.1"
                     /translation="MDGISSLSGAGQDTNNVVTSSVSKTLGKDDFMKLFLTSLQYQDP
                     SSPLDTNEMMSQMAQLSLMEQVANMTTAVDKLSEQAQNSALQSAVNFIGKDIKGVSLN
                     GEVISGKVESVQQTTNGVMLKLKDNDSLVPMTYVTEIN"
     gene            4670..5905
                     /gene="flgE"
                     /locus_tag="U0308_000870"
     CDS             4670..5905
                     /gene="flgE"
                     /locus_tag="U0308_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HEM2315845.1"
                     /translation="MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDL
                     LYQNTMGSVAGGLYAGTNPMSFGSGSKIGAILTDYTAGSPTATGRNKDAALQGRGFFI
                     AGDNAGGNIVYTRDGSFAVSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNS
                     AIPGEATKNGSLSGNIPLDWGEKDTISSELSVYDNAGGKHKLQVNMKAATPDASGNVS
                     YEYEIQMDGKALTPPVTGTLNYNAQGELTNPDALKNIQINSTVNGKQVNMGLNLSGLT
                     NYGTNQVFSPTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLV
                     KMGNGEYVPGLSSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGN
                     TKVIRVADDVMKQIVNLIQ"
     gene            5919..6155
                     /locus_tag="U0308_000871"
     CDS             5919..6155
                     /locus_tag="U0308_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HEM2315846.1"
                     /translation="MKINHTIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVV
                     KITISGKCIGYGEILTKDGKMFVKITKLGEGSSS"
     gene            6176..7169
                     /gene="fliM"
                     /locus_tag="U0308_000872"
                     /pseudo
     CDS             6176..7169
                     /gene="fliM"
                     /locus_tag="U0308_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464226.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
     gene            7172..8719
                     /locus_tag="U0308_000873"
     CDS             7172..8719
                     /locus_tag="U0308_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein"
                     /protein_id="HEM2315847.1"
                     /translation="MEQLLEKNITQMELDVIGEIANISFGSASTVLSDLLHQQVTIST
                     PKVEIVDLYNTKDIDIPHVVLEVNFHKGIEMRNLFVLQSEVAAAIADLMMMGDGNIDP
                     NEELSELHLSAVQEAMNQMMGHSATAMSNMFGEMIDITTPDIKVIALKEQLEDTNDQT
                     MIKVGFDLIIGDLITSNLMQLIPIDKGHELAKRLLGDAVPEPEPVKEEISLTAEELDV
                     FLEVCNIGIGSASTVLSKLLNRKVSLQIPTARVIDSKEFEFNERPCLVTSVEFVEGLR
                     SSNTFIISKNAALIMADLMMMGDGLVQEDAELTELEVSAVQELMNQMMGFSATAMSEM
                     LGTKIDISPPTMEFCNFGDTMIQKNIEEGKTVEVIFPLEVEGLLKTPMYQIFNPAAAK
                     EMAQLMLGIQAKEVAEKEATTPAEIIEPEKLAEPVHQAVIEEKETLSEMEQILEDIPV
                     TLEVVFGTAKVKLEKFISWCEKDVIILKESMNEPLVLALNGVTIGKGILVRVDDHFGI
                     QMTELVR"
     gene            8725..10128
                     /locus_tag="U0308_000874"
     CDS             8725..10128
                     /locus_tag="U0308_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315848.1"
                     /translation="MRKLGLMTILFWLCFSVQAFAADPEPPIISLEGEQHVFTSGEVI
                     SFHIENAADLKIILVNEHGQRKLLDEETYTVTDWDLDGSYQAEFYQADVPKPFVTVED
                     LFEVKQLEDVAKDETAPSLKTIEITHDEDVLLTSVLRVSADLDDAESGVKQATLVVHS
                     ESNESEIELIRNNYTGKFAAEIPLEKFQLGEKITFQLQLVDFAENEITVDLGNTVQLY
                     QPKAPLLSYDGNDITNVQKKIGQVGKQIELTLDKYTTEFPELETETGKIIPLKWQKTA
                     TEWKGSLTLPSELSGEIIHIQGMDQHLLVRATSEPFGEVQLVNNAILTGTILSDFTLI
                     SNLYIEVNGQKFSVERAGNRFTSAEITTTGKIVLHWTDWDGQIYSKQMNQEIKPVIAI
                     PGKEIIAPPPVIPNEKTQILTSPAPKPSVEAHENTPKKQVKKETSTKDNSSSIPFWIP
                     ALMIIGVIIFSGNRAMK"
     gene            10151..11317
                     /locus_tag="U0308_000875"
     CDS             10151..11317
                     /locus_tag="U0308_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315849.1"
                     /translation="MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPK
                     TPPVSFSFKELSSLQLNGTSAASLELYMKLMMNNAKKANDLIFYVMRAGIKNPTDSTK
                     WQTVRSEISSQLSTILMKQHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTF
                     ETTGKYDFLRMMQIASGNMETGIQMMREFQGHIEHATRLDPIVDARQETNWMIKVLRE
                     FGNMFQSRHLLPYELQAENINIWKLGSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKP
                     LTELFQELQRLADGQMTQGGIAVILDRMQGQLTRLAQLFQKMEIEAGFTDTERILGSV
                     DAEFASDMTKMMLLAQQEMSFFDLLVKDFRSVSKQPIFFMIVAIFIILLLIILF"
     gene            11424..11888
                     /locus_tag="U0308_000876"
     CDS             11424..11888
                     /locus_tag="U0308_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaaR family protein"
                     /protein_id="HEM2315850.1"
                     /translation="MNNVSIGQISQSKQTNVVRGMQELNQTQQLYFEQMKANGKKQTP
                     SLTEINELITNVTDKKSLVEMDMTVDNVLSYKKAVQTFLNFYVNNVMDYDNIESRHPK
                     YGFSQKMTILKQVEKQTNELDDVMNLIDTKTGHLDMLNRIGEITGMILDVVL"
     gene            11898..12326
                     /locus_tag="U0308_000877"
     CDS             11898..12326
                     /locus_tag="U0308_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Myocilin"
                     /protein_id="HEM2315851.1"
                     /translation="MQNELINQLEILIEKNVKATDAAILLGKLVQEENWIDAEERQLG
                     LQRELAALQNEYQALKTIIGEDNTLRTLQNTWTPAENAIIDERKKMLLEKENLLRVSV
                     TENQIRTEMQLAFSEHMVDVITGHHAETQAENNMMINETF"
     gene            12346..13866
                     /gene="flgK"
                     /locus_tag="U0308_000878"
     CDS             12346..13866
                     /gene="flgK"
                     /locus_tag="U0308_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HEM2315852.1"
                     /translation="MRLSDFNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTA
                     VYGDGGLLGGKQTGYGVKVTDIKRLTNTALTTQYNNQIAKQSASLYQSGALGQALNLF
                     GTPGKNTPSDNLDNFFTAWAALAKNPDQATNTTALLSSMSIFTDQLNQLHSGLKELET
                     TIAADTDAAIQDLNSLIKKLGSINKAIGNAGSNPPNDLLNQRDQLLSTMAGYAGISVS
                     AHPNNPDVYDVTIGGRLVVQGDETTEITSTRTATGFEFSVDGQKLNMPEGSIIASVRV
                     NQNEIKSYQEKIETFSNSLAKALDDIQVKNVNKTMDDLQKINDALKANPNDEKLLSNR
                     DELLRQLEKFPGVTRSGDTLTIGGVDHAIDTLGTSTYVTDVNDFSIPIFTQSSGKWIL
                     NPAITSNADNKPFLGVIAADIASLKTDKNIQGTTFPSFMDGIITEVATDASKSSATST
                     ADTQALNSLSESKSSLEGVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML"
     gene            13878..14753
                     /locus_tag="U0308_000879"
     CDS             13878..14753
                     /locus_tag="U0308_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein 3"
                     /protein_id="HEM2315853.1"
                     /translation="MRISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPG
                     ATAQILSYNHVLSQLNREKTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTS
                     DKDNMSQSAEEIKGLLDVLISVANSEDDGRYVFSGSSTSVKPFTTDKTTGEIIYNGTT
                     ENKKFRVTDTLEVEVFHDGSAMTDVFNNIQKIVDAMKTGDKDALSALQETNSKNIEII
                     TNSMTNIGGQKNGVTAYDNVLSSKIVDFSERKSNVEEVNMPEAVSNLNKTSIAYQAAL
                     QSSVMVQKLSILNYM"
     gene            14765..16054
                     /locus_tag="U0308_000880"
     CDS             14765..16054
                     /locus_tag="U0308_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein 2"
                     /protein_id="HEM2315854.1"
                     /translation="MGSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSR
                     IDLYASLKNALSESLKTMSSFTTYESKTKLATSSNETSFTVSSTSSSVNGSYSIEVQN
                     LATADTYNKAVPDIEAKIGVSGTIKINGKEIKVDADSSMKNVMNSINSAGAKVNIYTL
                     GENMVVTSSTTGVENSIKFEGDSAVLDALGLVQNSPDHLAAEDAKLRINGATVTSATN
                     KVTNYIPGVTINLKKETTGAEKLTIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKG
                     TILQASAVDLEANRALNNVFQHKKDGNTLFDFGISVDKEGVLKVDETAMKKMVAEDPT
                     AVERFFFGIGGIGDELYQSLNKTFGSTGFISDETTSMTNEINKLNLKLTDITSRNDTL
                     LTNITDQYNKWLEMMQAMQSDAMTLDALIDGMNSSNK"
     gene            16073..16459
                     /locus_tag="U0308_000881"
     CDS             16073..16459
                     /locus_tag="U0308_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FliS"
                     /protein_id="HEM2315855.1"
                     /translation="MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALEQLHF
                     SEADLILDKMEKIFEELKLQLNPEAGQELYDNIFGLYEWISEQIRQMQLLKQPVNIDT
                     IIHVITQLKEGYEGVMKHESSKDTFG"
     gene            16431..16712
                     /locus_tag="U0308_000882"
     CDS             16431..16712
                     /locus_tag="U0308_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315856.1"
                     /translation="MNQAKTHLVELKALFHSTGQLNVTLEEYQAKLNELLKSTEHLPK
                     DTKEAILKETREVINKGILFTQKQLESTENAFSENKSRNAANLNYAKFF"
     gene            16733..17134
                     /gene="flgB"
                     /locus_tag="U0308_000883"
     CDS             16733..17134
                     /gene="flgB"
                     /locus_tag="U0308_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HEM2315857.1"
                     /translation="MENYTTHIGNYLNYLQTANQVVSNNIANANTPNFKASEASFEES
                     FGSSLRASGQNSTESAGNLTKTNTKHLAGTDIDETNAKVTTKSGSINEDGNNVNVTSE
                     MISLTKNNQMYALAISALNYNSSINTAARGK"
     gene            17146..17556
                     /gene="flgC"
                     /locus_tag="U0308_000884"
     CDS             17146..17556
                     /gene="flgC"
                     /locus_tag="U0308_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HEM2315858.1"
                     /translation="MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKR
                     VVLSEITPFETALTGTKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAE
                     MTNLMVGQKMYAANTSALQANEKMMEKDLEIGKV"
     gene            17573..17869
                     /gene="fliE"
                     /locus_tag="U0308_000885"
     CDS             17573..17869
                     /gene="fliE"
                     /locus_tag="U0308_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HEM2315859.1"
                     /translation="MAIESINAASVLPKVTLGETAKTDNATGAGNTFTQMLDSMSDTQ
                     SNAQTSVSNLLTTGEGNASDVLIQMKKAESEMKTAAVIRDNVIESYKQLLNMQV"
     gene            17937..19589
                     /gene="fliF"
                     /locus_tag="U0308_000886"
     CDS             17937..19589
                     /gene="fliF"
                     /locus_tag="U0308_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HEM2315860.1"
                     /translation="MAKIKTMYSKLKNWHKGAILVGLFVVVTVLLLYMNTPKTEVTLY
                     KNLSETSQQQVTDQLAKMGVDYTVDKSGNILVDEKVETLVRDKFADLGIPYTGQDGND
                     ILLNSSLGASEEDKKMQEKVGTKVNLEKEIVQSYGTTIDSASVQLTLPESSSIFEEAS
                     QKGTAAVTLKTKNNQTLTSEQVLGIQRTVSAAVPNVASDDVAIIDTKNGVISEADTSK
                     EEGSSAYKNEVDIQNAIGKNVKTDIEGTLSSIFALDNFRVNTNVSVNFDEIKQNTEHY
                     PNDGKVRSNQKDTSTDTSKGSANTTESGTASNADVPNYTEQNGDDTNTYTSEKSSETT
                     NYELDSTIQEIKKHPALAKTNVVVWVDQNALNKNGVDMAEFTKAIGVSAGLTPNMTTE
                     EAGADGEAAAAPTFEGTFQNGDVTIMPIQFLDNATPAEKDTTEKAAPASKAWIWWLAG
                     SLLFAIIAAGIIAYIIFLKRKEQLEEALEPEEKDYIPAEEAIINPEEHPDFNFQTDAF
                     DLSEPELKARKESLKNKLGEMAKEDPGRAAAVIQKWLNERQE"
     gene            19592..20698
                     /gene="fliG"
                     /locus_tag="U0308_000887"
     CDS             19592..20698
                     /gene="fliG"
                     /locus_tag="U0308_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HEM2315861.1"
                     /translation="MAETLKETLEETNAELETVEVEETEEKTTTSADSGISRREKAAL
                     IIWSLDEQIATEVVDLLPDASKQRLAREMAKMKEMDGGAVEEATREFLGELELLSGGI
                     AKLDREHLQRLFPDMTTEELNQLIYGVEAESRIGETALDILREIDDVDSLFTIISDES
                     PQTIAMIASYMKPEEASKLLALLPEEKMINTVIGIASLEQFDSEVMQNVSNLLRIKLD
                     TMSNSSLNKTDGIKNVANILNNVTRGLERTIFEHLDAEQAELSERIKEKMFMFEDIIL
                     LDNMTLQQVLAEIQDNNKIARALKNEKEELKEKILSCVSKNRRDMITEELEVLGPIRL
                     SDVEQAQQDIANVVKNLEKDGKIVIQRGEQDVLI"
     gene            20685..21377
                     /locus_tag="U0308_000888"
     CDS             20685..21377
                     /locus_tag="U0308_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HEM2315862.1"
                     /translation="MSLSNPRIPKGKVTLSDVKMELFYLDDIEETEEVESPYSKELEQ
                     LESHQKELEKHLSAIEIEQQKLANEKAALQAERQAIEELKREAETEIEANKQAFEKEK
                     TQMYLTITDFLWDESIDLAERIVHQAIDTRQIEVLPMLTEVIQKLPVAFDKLNVTTHP
                     ETLKALKEENTGTKYDWLLENIHWNFDMRLDYGEFTVEEEKEYFDYRITEIFQTLHKQ
                     NAERKILGGDKP"
     gene            21374..22675
                     /gene="fliI"
                     /locus_tag="U0308_000889"
     CDS             21374..22675
                     /gene="fliI"
                     /locus_tag="U0308_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HEM2315863.1"
                     /translation="MNWSPKTEAWQELKNTVPYIQKGKIHTVQEQVYISKGPQVKIGD
                     TVMVGENKVLCEVISIEKENNMLLPFNQSDKVAYGDWVYVTDTKITIPADEYLLGKVL
                     NASGDILNEEAGVAKFKQKMPLEAPPIHAFSRAEITDTLETGIKAIDGMLTIGIGQKI
                     GIFAGSGVGKSTLLGMIARNAKADINVIGLVGERGREVKDFLRKDLGEDGLRKSVIVA
                     ATSDESHLMQLRAAKLATSIAEHFRDQGKTVLLMMDSVTRFADARRSVDIAVKDLPIG
                     GKTLLMESYMKKLLERSGKTQNGSITGIYTVLVDGDDMNGPVPDLARGILDGHIVLTR
                     ELATKNHYPAIDVLGSVSRVMEEIVPESQWKTASKIREWMSIYQENELYFKLGTIEQT
                     SDNAAIFTSKEKSYFIHQFLKQLRDESVTLEETSKLMETLV"
     gene            22692..23360
                     /locus_tag="U0308_000890"
     CDS             22692..23360
                     /locus_tag="U0308_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEM2315864.1"
                     /translation="MNPVEQVISARQAEFQSAFEAAKQSATTFETKLNERLNETTTAK
                     TTSVLTVTDAELTRAREAYEALINQSDTNSAASASSTTTETPTTSTGESTNWNNYQIK
                     PISAENEGKYSDLIKTSAAKYGVPEALIKRVIQVESNFNPNVVSSAGATGLMQLMYGS
                     NRTDPATNIDAGTKQLAGYIKKYDGDLKLALAAYNAGPGNVRKYGGVPPFKETQNYLT
                     KIIG"
     gene            23374..24018
                     /locus_tag="U0308_000891"
     CDS             23374..24018
                     /locus_tag="U0308_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315865.1"
                     /translation="MGNWQQKWESWRDMTVAMQQEIKIEAAEKVTSYIKNDQFEEAIN
                     VIRQTENLLNELDFETKMNRVEEQLQAFTSDQEAAKSFEASQLQNLEKPSTKVSFDLS
                     HVKSEAINQFTKRDFNLVDSNDTHMQFLKGNRNFYMDIFNPEESEEYHYANLDEKCQY
                     KNIGFICQNDAAAEIATKLTNEWLETLEAPKKKFLTVNIANLNAMKQNQEVLFQ"
     gene            24137..24463
                     /gene="lftR"
                     /locus_tag="U0308_000892"
     CDS             24137..24463
                     /gene="lftR"
                     /locus_tag="U0308_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464246.1"
                     /note="act as a regulator of LieAB which is involved in
                     aurantimycin A resistance; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator LftR"
                     /protein_id="HEM2315866.1"
                     /translation="MKGLTELLKGSLEGMILERISRGETYGYEITKYLNDLGFDEIVE
                     GTVYTILVRLEKKGLVEIEKKKSELGPPRKFYTLSPAGEEELAIFWKRWDFIQGKIMQ
                     VKGGQA"
     gene            24463..24786
                     /locus_tag="U0308_000893"
     CDS             24463..24786
                     /locus_tag="U0308_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1048 domain-containing protein"
                     /protein_id="HEM2315867.1"
                     /translation="MFNWYKKYREEKRDYKQYKKRIAALPEDYKTAMKAIETYLWNFA
                     KGAGMFEILKNVLEMFENAAADNLELKAVVGDDLAEFADNLLSEFPEETWMDKQRQKL
                     RDSIK"
     gene            complement(24829..25476)
                     /locus_tag="U0308_000894"
     CDS             complement(24829..25476)
                     /locus_tag="U0308_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G-binding protein"
                     /protein_id="HEM2315868.1"
                     /translation="MKEFIEPYQYNFIKNQLANVSRAYRSANDTSTLKALKSLTEEKI
                     NELFPESVLEEHKELFSELHAITSTKEAEPFLDGLKAYVIPFAPPSDVKLKKLFAKTK
                     KLKIPAWSKLDLRDYTFYGWNDIAQQRKYIVTYEDGNLVGVQGTISTEIQKGVCSICH
                     SHSKVSLFMAKTKSSSDGIYTTNGNYICYDSDVCNQQIKTHETLDEFIEVVKKRK"
     gene            25747..27477
                     /locus_tag="U0308_000895"
     CDS             25747..27477
                     /locus_tag="U0308_000895"
                     /EC_number="1.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate oxidase"
                     /protein_id="HEM2315869.1"
                     /translation="MKKVKASETLVQTLKNWGIDHVYGLPGDSIDTVVDALRKEQEAI
                     EFIHVRHEEVATLAAAAYTKLTGKIGVALSIGGPGAIHLLNGMYDAKMDHVPMLVLAG
                     QVTTDVLNTGFFQEVNLPAIFEDVAVYNKQIDNAETLADVVDEAIRTAYKEKGVAVLT
                     IPNDIPSQVIKASLEAKTVKFEQENPKLDEAAIQEAVARIEKAEKPVILAGLGTKHAG
                     PELIAFSEKLKIPIIHSLPAKTIVPDNHPNALGNLGKIGTKPAYEAMQETDLLLMFGN
                     DYPYSDYLPKKADCIQIDIDPAKISKRFPATVGLVGDAAEIIGNLTAKTAPVEERKFL
                     QACQENMQEWWKWLEEDIAQTTDPIAPEVVMANIQKIADKDAIFSIDVGTATVWSTRY
                     LHLTPQNDFIVSAWLGTMGCGLPGAIAAKKAFPDRQAIAIVGDGGFSMVMQDFVTAVG
                     LNMPMIVVVLNNQQLSFIKYEQQSAGELNYAIDLPDINYAKFAESCGGIGFRVEKMAD
                     LEAAFGNAKLATKPVIIDVSVDSAAAPLPGKIVMDEALGYTKFEIQSVLEDHRFAKMP
                     PLKTILRRFL"
     gene            27638..29443
                     /locus_tag="U0308_000896"
     CDS             27638..29443
                     /locus_tag="U0308_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEM2315870.1"
                     /translation="MNLIKNRKLKTKLSINIVITTIMLIGLGATSFLGFRHVATLSDN
                     MVDNNVAPMKEIAKIQTNMAQINIDILTMFDTINGKSALIKDIDDLYAENDQAIHNFK
                     KANLTAEDKKQLAYFEEKLADMKSSASSVISDTSSALDDAELLGAQNRYYQNVKTKFD
                     DATKQLNVLNEMNYKEVENSSQAISDFGVKISIIFTAVIIAVLISLFIFNAYITRVIL
                     KGIRHLQTAVHKVASGDLSYRSTYNGRDELGDITNDLNEMSENLRLMIEDVKKASTDV
                     KSSSDNVIISSEIISAMTTEMDIEMKMMGEQIQTQIGSMKESTDAMDQMTGGVQNVAE
                     YALKVSDLTKDSAEKTNDGIAVINNLVSQMDRISGVMRSSTDVVSQLVNRVGEVEKAL
                     DTVTNIADQTNLLALNAAIESARAGEHGRGFAVVAEEVRKLAEQSRLAVVDINTVLKK
                     IQTESKTTIEVMNTGLSESEAGQKIISETEATFTDLLNRVNDISAQMQNVSQETEEMA
                     AGIEEVNTSISDVTEISNQIGEKSTAALEFAEVNKMKVDELVVISEEMQKISGSLEGY
                     IANFNTEVSEEAVEVTEEPESETKDPGEPVLAENV"
     gene            29456..30184
                     /locus_tag="U0308_000897"
     CDS             29456..30184
                     /locus_tag="U0308_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEM2315871.1"
                     /translation="MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLD
                     NEPFNVRLDVPLVNQMDAPTLFNGCEVTSLAMLLQFNGKRVTKNELANNLPTTPIEQN
                     GLHGNPDKAFVGSISGDSPGLGVNHAPIANLAAKYVNEAHVHDISGNSIQDIITVLST
                     GAPVWIITTTDYHAPKNWQTVQTKEGKKKITYSMHSVVITGFDKDNFYINDPYGHKNR
                     AVKRSVLEEGWSAMGKQAIYLSHP"
     gene            complement(30227..30439)
                     /locus_tag="U0308_000898"
     CDS             complement(30227..30439)
                     /locus_tag="U0308_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2315872.1"
                     /translation="MVFAKKLVASIAVFISLGFIYFRESTAVAFESTNTASFLPSTGD
                     AFSVWPIVIGVVLVALAVVLFIKKKI"
     gene            30886..32691
                     /gene="glmS"
                     /locus_tag="U0308_000899"
     CDS             30886..32691
                     /gene="glmS"
                     /locus_tag="U0308_000899"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEM2315873.1"
                     /translation="MCGIVGYIGTNNAKGILLEGLEKLEYRGYDSAGIALQNKDLVTV
                     VKEKGRIADLASLVPSDAFGTTGIGHTRWATHGKPNHENAHPHQSKSGRFTMVHNGVI
                     ENYTLLKEEYLKNHSFVSDTDTEVIVQLIELFAAELSTKEAFKKALSLLHGSYAICLI
                     DQTDTETLYAAKNKSPLLIGKGENFNVIASDAMAVLKETDEFVEIMDKEIVIVTKDGF
                     TLETLEGEEISRASYTAELDASDIEKGTYPHYMLKEIDEQPAVTRKIIQAYQNEAGEI
                     NVDQTILDEILSSDRIHIVACGTSYHAGLVGKNLIEKMVKIPVEVHVSSEFGYNLPLM
                     SKKPLFIFITQSGETADSRQCLVKVKELGYRTLTLTNVPGSTLDREADHSMYLYAGPE
                     IAVASTKAYTAQISVLAVLAVSLGREIGDAEALSINLAAELGIVATAMEAMVSSKEVI
                     EHIAGEYLATSRNAFFLGRNIDYFVAMEAALKLKEISYIQAEGFASGELKHGTIALIE
                     DGTPVLALITQESINWNIRGNVNEVLARGAKTCVFAMENVAQPGDRFVIPQVHPLLTP
                     LASVIPCQLLAYYAALHRDCDVDKPRNLAKSVTVE"
     gene            32804..33544
                     /locus_tag="U0308_000900"
     CDS             32804..33544
                     /locus_tag="U0308_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315874.1"
                     /translation="MEVSHVTLEPNKDSRPAVLTIGKFDGVHIGHQTILNTALSIKKE
                     NEILTAISFSPHPLWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETT
                     PEEFVRDHLTNLNLSHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQT
                     KISSTNIRAFIRRGHFQEAEELLGHPWYITGIVENGEMTGLDDYVLPATGTYQTDSGI
                     VNVTNNRTIEVGLSDGLQQLHMKNELSE"
     gene            33627..34106
                     /locus_tag="U0308_000901"
     CDS             33627..34106
                     /locus_tag="U0308_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315875.1"
                     /translation="MKIPTTLKHKPVIVVENYEEVDGKNAYHSDAKGLSLGLAQWNDR
                     GKVDISAKVWRHTGDKWSRQSEELPLHRVLDLAILIARTKVHFKDAYRLPHFYDKENP
                     MLDRIGLQGDALTIAVCEDNEYIDEDMQLFEQVLKNDDELLSERLKTLSKLLQEAGY"
     gene            34120..34458
                     /locus_tag="U0308_000902"
     CDS             34120..34458
                     /locus_tag="U0308_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEM2315876.1"
                     /translation="MNKDNRKELIRAYKEKSPDAGVYRFISTKSGKSLIDNTMDLKGI
                     ANKLAFGVKIGAGNMLPPEMAKEAKEYGIDTIQFEILEKVDIKPEMTKEDIKEENDVL
                     LSLWLEREDI"
BASE COUNT        12400 a         6704 c         6999 g         8369 t
ORIGIN      
        1 tatttttgga ttacaaatag ggcgcagagc caaagttaag atagttaact attttttaaa
       61 taattttatt ataaaaaacg gatatttttt aagaaaaagg tagaaattgt cctattttta
      121 ttataaaatg atattatgcg atttttttaa aaaatattta taggtatagg aatgggagtt
      181 gtattttatg ttgaagttgt tgattgtcga cgatgcaatg ttcatgcgta cgatgattaa
      241 gaatatcgtg aaagatagcg attttgaagt agttgcagaa gcagaaaatg gactggaagc
      301 agtgaaaaag tatgatgaag taaaaccgga tatcgtgaca ctggatatta cgatgccaga
      361 aatggatggc ttagaagcac ttgcgcaaat tatggccaaa gatccatcgg cgaaagtaat
      421 tatgtgctcg gcgatgggcc aacaaggtat ggttgtagac gccattaaaa aaggtgccaa
      481 agactttatc gtaaaacctt tccaagcgga ccgggtttta gaggcgttag aaaaagcagc
      541 taagtagaga aatggaggtg gatagcatga ctacaaatat gttagacctg tttatagaag
      601 aagcttcaga acatttacag gcgctaaatg ataatctgtt acagcttgag aaagacccga
      661 cgaacggtca gttagtaagt gaaattttcc gttcagcaca tacatttaaa gggatgtccg
      721 caacgatggg cttccaacag gtggctgatt taacgcatgc aatggaaaat gtactagatg
      781 aggtacgcaa taatcgattg gctgtaacag aacatttggt agacattatt tttacatgta
      841 catctcattt ggaaacaatg gtttcggata tccagcacgg cggacaaggc gcggcggata
      901 tttcgaaaac cgtagctgac ttagaggcgc ttttacatcc agaacaagaa acagatttag
      961 cggtagaaaa aacgtatcgc attcagattc gaattgaaga agcagctatt ttgaaagcag
     1021 tacgggcggt aatgtgttta gagcgacttg cagaaatggg gattatttca gaaacaacgc
     1081 cagacagaga agcgattgag ctagaagagt ttgagcagtc attcgaagta gtcctagagt
     1141 cggcgcaaac aaaagaagaa atcgaagcgg ttgttctaga tatttctgaa atcgaaaaag
     1201 tgactgtgac agaagaagtg gaagaagttc aggttattga accaatcaaa aaagccgcaa
     1261 aacaaacaac caaacgatta gaaaataaaa ccattcgtgt acaacttgaa aaaatcgaaa
     1321 agctaatgaa cgtttttgaa gaaagcgtca ttgaacgggc gagaattgat gaaatcgcag
     1381 aaaaaacgaa taacaaagaa ttgatggaac acttaggacg attcagttcc atctccaaag
     1441 aaattcaaaa cggcttacta aatatgcgta tggtgccagt ggatagtgtg ttcaatcgct
     1501 ttccaaaaat ggtgcgcaca ctagccaaag aattaggtaa gaaaatcgac ttagtgattg
     1561 aaggcgcgga tacggaagtc gacaaaatcg tcattgatga aattggcgac ccacttgttc
     1621 acttaatccg taattcagta gaccacggag ctgaaacagt cgaagtaaga cgtaaaaatg
     1681 ggaaaaatga aaccgccaca attaatctaa aagctttcca tagtgggaac aatgtcgtga
     1741 tcgaaattgc ggatgacggt gcgggaatca ataaacgcaa agtgttagaa aaagcgattg
     1801 cgaaaaatgt cgttacaaga gcagaatcaa ccaaaatgac ggacgcggaa atttttgatt
     1861 tattatttga ttcgggtttc agtaccgcgg atcaagtatc cgatctttct ggccgaggcg
     1921 tgggactaga tgttgtccgt aatacgattc tcaaaatcgg cggaaaaatc agcgtagaat
     1981 caagtgaaaa cgctggttcg acgttccgaa ttgagattcc gctgacatta tcgatcatcc
     2041 aatcgatgct cgttgcaaca tcagaacgtc gctatgctgt accgctggca aacgtggccg
     2101 aagccatcac aattaatcct gcagacattc aacacgttca cggcaaagac ttaatcaact
     2161 accgtgaaac cattatcgaa gtactcgact taggcgaatg cttccatgaa acacctttga
     2221 atgacacgga tgaattacta ttactcgtcg tgaaaaatgc caagcgaact tttggactta
     2281 ttattaaaga tattatcggt caacgggaaa tcgttttaaa aacacttggt ggctttttca
     2341 gcgaaagtca gattgccttt tctggagcaa cgattttagg cgatggtcgt gtcgtattaa
     2401 ttttaaattt agaaacattt taaggaggaa ccatgatgga acaagtattt caagtagaac
     2461 ttcctgaatg ggaaccgaaa gaaccgagcc aagaaggacg cgaaaaaggc tctatccgcc
     2521 aagtagacaa tattggcgtt aacttaatcg tccgccttgg aaaaaaagaa atgccagtag
     2581 gggatatcgc cgagctaagc attggcgatg tcctcgaagt ggaaaagaaa cctggccaca
     2641 aagtcgaaat tttcctcgat gaaaagaaag tcggcatcgg tgaagctatt ttgatggacg
     2701 agaacttcgg aatcgttatt tcagaaatcg actaaagaaa gagggcaagt gatttgaagc
     2761 aagaggctta caacgcagtg aagatgaaag tggaccaaga gaaaacggcc attttaaagg
     2821 aattgcaatt attactatcc aaacgggaaa aagtcgtaga aaaattagcg cacgaaaaag
     2881 aagtctatta ctcaagaacg aaaaaagaaa gactccaagt ggcggtatta gccggaagca
     2941 tgcaactaga tgccttctcg ccgagccgca ttcaacaaat ggagcgagaa attcaccaaa
     3001 ttagccagta cattaaaagc aatgaacaaa tcttagagca acttgaggaa aaagggaaac
     3061 aggccaaaaa aatgtacgat gacacacgaa aaaaatggca acagcttgaa aataaaagag
     3121 aagaacaaac attacgcgat ttaaaaatgg tgctattaaa gtaaaaggga ggaaaacgca
     3181 tgctaatccc agataatttg ctacaaccac tcgtcggaaa aaaacaggtc gaaccaaaag
     3241 aatcgttagc agaagaatta gtagaactgc cttttatttc acttttaatg gaaaatagcc
     3301 ctgcgccgct cttaaaggga gaagcggata acggagaaca agctacgcta ccactaaaag
     3361 aaatcgccca accactcgtt tcagccaagc tactcgacga tgcaccagaa acgaaactgc
     3421 aagtagcacc actcgaactc aaagaagtga aagaaacact tgcggcaatc gccaaacaag
     3481 caattgatca acccaaaata gaaaacgccc cgcaagctgt agaaactcca gtaacaaata
     3541 caccgaaaga acccacaaaa aatgccagta gggagcaaca accgccacca gaacttatca
     3601 tacctacaaa agaatcacct aaactagcag aaaacgtggc caaaaaccaa ccagtcctag
     3661 ccaaattacc tcaagaaaaa gaagtcgtgc aacttttcaa agcgagcatt aaagagccag
     3721 taactgccaa ggaagaagtt gccgtcaaaa agcccgcaga atccagcaat atttggcatg
     3781 atacggcgaa acaactcaca ccagctgcca aacctgaagt cccagtgacg ttaaaacaac
     3841 ttgataaaac catcaccgac caaatcgaac agctacaaaa attccaagtg aaacaaaata
     3901 aagccttttt cgccatccag ccggagtcac tcggaaaagt cgaagtttta cttaaaaaaa
     3961 tgcccgataa aatatttgta catatcgaat atcaggaaca aacggcgaaa caaaaactcg
     4021 aacagatggc gcaagatttg cataatcgtt tccgagatcg cggcgtagaa gttgccgtga
     4081 caatgacaga aaaacaagca ccgaaagaga ataaccaagg ctcggatggt cgacaccaag
     4141 gtgaatctaa aaaagaaaaa gaacgcgaaa atccacatca ggaaagagct aaacaagaag
     4201 catttgattt agaggaggag acgtaatttg gacggaatta gtagtttatc aggagccggt
     4261 caggatacaa ataatgtagt aacatccagc gtatccaaaa cccttggcaa agatgacttc
     4321 atgaaactat ttttaacaag tttacaatac caagacccat cgagcccgct tgatacgaat
     4381 gaaatgatgt cgcaaatggc gcaactttcc ttaatggaac aagttgccaa tatgaccact
     4441 gccgtagata agctttctga acaagcgcaa aactccgcct tgcaatccgc ggttaatttc
     4501 atcggtaaag atataaaagg tgtttcgctg aacggcgaag taattagtgg aaaagtcgaa
     4561 agcgttcaac aaacgacaaa cggcgtcatg ctgaaattaa aagataacga tagcctcgtg
     4621 ccaatgacat atgtaacaga aattaattaa aaatttggga gtgtgaatta tgaatcaaac
     4681 tatgtataca gctatttctg ggatgaatgc gttccaacaa gcattatcgg taacatcaaa
     4741 taatattgcc aatgccaaca cgacaggata caaaaaacaa agcgtcgttt tcaatgattt
     4801 actttaccaa aacacaatgg gatctgttgc aggcggactt tatgctggaa caaacccaat
     4861 gagtttcggt tccggttcaa aaattggagc gattttaacc gattatacag cgggttcccc
     4921 aacagcaacg ggcagaaata aagatgcagc actacaaggt cgcggctttt tcatcgcggg
     4981 cgataatgca gggggcaata tcgtttacac gcgtgacggg agcttcgccg tttccgacaa
     5041 caattattta actacccaac aagggaaata cgtaatgggt tacgcaacag acaaaaatgg
     5101 caacgtttta aacggtaatt tgcaaccaat tcaaatcccg ctaaatagcg caattccagg
     5161 agaagcaaca aaaaacggta gcttaagcgg taacattcca ctagactggg gcgaaaaaga
     5221 tacgatttct tccgagcttt ctgtatatga taatgctggc ggaaaacata aacttcaagt
     5281 gaatatgaaa gctgctacac cagatgcgag cggtaatgtt tcctacgaat atgaaattca
     5341 aatggacgga aaagcattaa ctcctccagt aacaggaaca cttaattaca atgcgcaggg
     5401 cgaattaaca aacccagacg cacttaaaaa tatccaaatc aattccacag taaacggcaa
     5461 acaagtcaat atgggcttaa acctaagtgg cttaaccaac tacggaacaa accaagtatt
     5521 ctcaccaact tctgacggta aaggcgctgc gactgtaaaa gattatgcag ttaccgattc
     5581 tggctatatt gcagtgagtt actcagatgg tacagttatc ccagttgccc aacttgcggt
     5641 ggctactttc tccaatgaag acggcttagt caaaatgggg aacggcgaat atgttccagg
     5701 attatcttct ggcgatgcag tatacggcgt tgctggccaa aatggcgctg gcggaattag
     5761 tggctcctca ttagaaggct caaacgtaga cttgtcccgc gaattcgtta acttaatgac
     5821 ataccaaagt ggtttccaag ggaatacaaa agttattcgt gtggcggatg acgtgatgaa
     5881 acaaattgtg aacttgattc agtagggagt ttagctaaat gaaaattaat catactattc
     5941 cactcagaat cgacttcgag ttaggacgta cgaaacagcc agtcggtagt ttgctagatg
     6001 taaaaaaagg gaccgttttt cggttagaag attcaacagc caatgtggtc aaaattacga
     6061 tttctggcaa atgcatcggt tacggtgaga ttttgacaaa agacggcaag atgtttgtca
     6121 aaataacgaa attaggagag ggaagttctt catgagagct agggagtgac aaaaaatgag
     6181 cgataaatta agtcaagaac aaattgacgc cctgctttcc caaataagtg aaggtaaggt
     6241 agttgatgaa agtacggaaa ttggcgactt tgggcgcttt catccctatg actttcataa
     6301 accagagaaa tttggtgcag aacacctcga aagcttaaag acgattgcat ccgcttttac
     6361 gaaaaaaagc atggagtttg tttcccagcg tatccggatt ccaattcata ccgaagcaac
     6421 ccttgcagat caaagtttcc tttgcgagtg gttatatcga aacaatgccg aacgatagct
     6481 acattttctg cattatcgac ctgggtaatc cggagctcgg tcaaattatt atcgaactcg
     6541 atttagccta tatcatttat attcatgaat gcttatctgg cgggaatcca aaacgaaaat
     6601 tgagcgagcg cagactttta tctgtttttg aagagctgac gttgaaatct attttagaaa
     6661 aattctgcga agcactcaaa gacagtttta aatcagtaca tccaatctca ccagaaatcg
     6721 ttaatatcga aactaaccca gcacttctac gtgtcacatc accgaacgac atgatggcgc
     6781 ttgtcagtgt tgatattaaa tcagagtttt ggattagtac aatgcgcatt ggcgtgccgt
     6841 ttttctcggt ggaagagatt atgaataagc tggaaaacgt cgtggaatat acgtttgata
     6901 agcggcggaa ttttgatgcg gaagtcgagc aagaattgca tcaagtcgag aaagaagcgt
     6961 gcatacgtgt aggtgaaatt aaaacaacgt ggaaagaact gaataagctt gaagtaggcg
     7021 acgtgcttct gacagaaact catatacgtg acacactcaa aggctacgtc actgaaaaat
     7081 ggaaatttga atgttatatg ggaaaaagtg gtaaccaaaa agccgttaaa tttatgcgtc
     7141 atacagggcg gacagagcag gagaggtaga agtggagcaa ttactagaga aaaatatcac
     7201 gcaaatggaa ctagatgtga taggagaaat cgccaatatt tcgtttggct cagcttctac
     7261 ggtcttatct gatttactac accaacaagt caccatttcg acgccaaaag ttgagattgt
     7321 tgatttatat aatacgaaag acattgatat tccacatgtc gtgttagaag tgaattttca
     7381 caaaggaatc gaaatgcgga atttatttgt tctgcaatca gaagtggctg cggctatcgc
     7441 ggacttaatg atgatgggtg atggaaacat tgatccgaat gaagaacttt cagaacttca
     7501 tctaagcgcc gtacaagaag cgatgaacca aatgatggga cattccgcca ctgcgatgag
     7561 caatatgttt ggcgaaatga ttgatattac gacaccagac attaaagtaa tcgcgctaaa
     7621 agaacaatta gaagatacga acgaccaaac aatgataaaa gtcggctttg acttaattat
     7681 cggcgacttg atcacatcga atttaatgca actcatccct attgataaag ggcatgaact
     7741 tgcaaaaaga ttacttggcg acgcagttcc agagccagaa ccagtaaaag aagaaatcag
     7801 cttaacggcc gaagagttag atgtcttttt agaagtatgt aatatcggca tcggttcagc
     7861 ttcaaccgtt ctatccaaat tgcttaaccg taaagtttcc ttacaaatcc caactgcacg
     7921 cgtaattgat agcaaagagt tcgagtttaa tgaacgtcct tgcttagtga cgagtgtgga
     7981 atttgtcgaa gggctgcgct caagcaacac atttatcatt agcaaaaatg ccgcgctaat
     8041 tatggcagat ttaatgatga tgggagacgg tttggttcaa gaagatgcag aactgacgga
     8101 acttgaagtc agcgcagtgc aagaattaat gaaccagatg atgggcttct cagcgacagc
     8161 aatgtcagaa atgctcggaa caaaaatcga tattagccca cctacaatgg aattttgtaa
     8221 tttcggcgat acgatgattc aaaaaaacat tgaagaagga aaaactgtcg aagtcatctt
     8281 cccgctagaa gtagaaggac tattaaaaac gccaatgtac caaattttta atccagcagc
     8341 agcaaaagaa atggcgcaat tgatgcttgg gattcaggcg aaagaagtcg cagagaaaga
     8401 agcgacgact ccagcagaaa taatcgaacc agaaaaacta gctgaaccag tgcaccaagc
     8461 agttatcgaa gaaaaagaaa cactttccga aatggaacaa attttggaag atattcccgt
     8521 aacgcttgaa gtggtattcg gaacagcaaa agtaaaactc gaaaaattta tctcttggtg
     8581 tgaaaaagat gtgattatcc taaaagagag tatgaacgaa ccacttgtct tagcgctaaa
     8641 tggcgtgacg attggtaaag gaattttagt tcgcgtggat gatcattttg gtatacaaat
     8701 gacggagtta gtaaggtgaa aaatgtgcgg aaacttggac tgatgacaat tttattttgg
     8761 ctgtgttttt cggttcaagc atttgcagca gatcctgaac ccccgataat atcgcttgaa
     8821 ggcgaacagc atgtttttac atctggtgaa gtgatttcgt ttcatattga aaatgcggct
     8881 gacttgaaaa ttattctggt gaatgaacat ggacagagaa agcttctaga cgaggaaacg
     8941 tatacggtga cggattggga tttggacggg agttaccaag ctgaatttta tcaagcagat
     9001 gtgccgaaac catttgttac tgtggaagat ttatttgaag tgaaacagct tgaggacgtt
     9061 gcgaaagatg agacggcgcc gagtttgaaa acgatagaaa ttacgcacga tgaagatgtc
     9121 ttgttaacga gcgtgctacg tgtatcagct gatttagatg acgcggaatc tggcgtgaaa
     9181 caagcgactt tagttgttca tagcgaatcg aatgaatcag aaatcgaact cattcgcaac
     9241 aactatacag ggaagtttgc tgcagaaata cctttagaaa aattccaact gggtgaaaaa
     9301 atcacttttc aactgcaact agttgatttt gccgagaatg aaatcacagt agacttagga
     9361 aacactgtcc aactatatca accaaaagca ccccttttaa gttacgacgg taatgacatc
     9421 acgaacgtgc agaaaaaaat cggccaagtc ggcaagcaaa tcgagctaac tctcgacaaa
     9481 tatacaactg aatttccaga actagaaaca gagaccggca aaataatccc actaaaatgg
     9541 caaaaaacgg caactgaatg gaagggaagt ctaactttac cgagcgaatt atccggtgaa
     9601 atcattcata ttcaaggaat ggatcaacac ctgctcgttc gcgccactag tgaacctttt
     9661 ggcgaggttc agttagtcaa caatgccatt ttaacaggaa ccattctttc ggatttcaca
     9721 cttatttcaa atctttatat tgaagtaaac ggtcaaaaat tttccgtcga acgagcgggc
     9781 aaccgtttca caagtgcaga aataaccacc acaggcaaaa tagtgctcca ctggacagac
     9841 tgggacggcc aaatttattc caagcaaatg aatcaagaaa tcaagcctgt aatcgcaatc
     9901 ccaggtaaag aaataatcgc accaccacca gtaataccga acgaaaaaac gcagatacta
     9961 acatcaccag ctcctaagcc atctgttgag gcacatgaaa atacccccaa aaagcaggtg
    10021 aaaaaggaaa cctcaactaa agacaactca agcagtatcc cgttttggat tccggcgctc
    10081 atgattattg gcgttattat tttttcgggt aatagagcaa tgaaataaaa gcagaagtga
    10141 ggtggacgga atgaaaatag atggcattca agaatctgca gaaaatcgta atcaactaga
    10201 acgggaactc attaaacaaa atccagttgt aaaagaaggt acgataaaag cacaaatgaa
    10261 tacagaagta gccgtaccga aaacaccgcc agtatcattc tcttttaaag aattaagtag
    10321 cttacaacta aacggaacaa gcgcagcaag tttagaatta tatatgaaat taatgatgaa
    10381 caatgctaaa aaagcgaatg atttaatctt ttacgtgatg cgggcgggaa tcaaaaatcc
    10441 aactgattct actaaatggc aaacagtcag aagcgagatt agtagccaat taagtacaat
    10501 tctaatgaaa caacataatt ttgaagcgta cttttctgaa aatcccgcga atcaaaaatt
    10561 atttttagcc aatcaaaaaa ttatgaacga aatatccttt ttgctaaaaa tgttgccaac
    10621 cttaactttt gaaacaacag gaaaatacga cttcttgcgc atgatgcaaa tagcttctgg
    10681 caatatggag actggaatcc aaatgatgcg cgaattccag gggcatatcg aacatgcgac
    10741 aagactagac ccgattgttg acgccagaca agaaacgaac tggatgatta aagtgttacg
    10801 cgaatttggc aatatgttcc aatcgcgcca cttattacca tatgaattac aggcagaaaa
    10861 catcaatatt tggaagttgg gtagcgaata cttaaaacta atgaaccaac ttttaccgca
    10921 aattggcgca tttccaaatg ggaatatcaa aatttttcac caacaagcga ccaagccatt
    10981 aacggaactt ttccaagaac tgcaacgctt ggcagacgga caaatgacgc aaggtgggat
    11041 cgccgttatt ttagaccgga tgcaaggcca acttacacga cttgcacaac tgtttcaaaa
    11101 aatggaaatc gaagcaggtt tcaccgatac agaacgaatt ttaggtagtg tggacgccga
    11161 attcgctagt gatatgacaa aaatgatgct actcgcacaa caagaaatgt cattttttga
    11221 tttattagta aaagatttcc gaagtgtttc taaacaacca atatttttca tgatagttgc
    11281 tatatttatt attttattat taattatttt attttaaaaa agatattttt tgaaaaaata
    11341 tatacttttt caggttgttt cagtataatt aaatagaaaa ataaggttta gaaagcgaaa
    11401 atgagttttt cgggggaaaa aggatgaata atgtttcaat tggccaaatt tcgcagtcca
    11461 aacagacgaa tgtagttagg ggaatgcaag aattaaatca aacacaacag ctttattttg
    11521 aacaaatgaa ggcaaatggc aagaaacaaa ctccttccct gactgaaatt aacgaactaa
    11581 tcacgaatgt cacagataaa aagtcactcg ttgaaatgga tatgacggta gataatgttt
    11641 tgagctataa aaaagcagtc caaacatttt tgaattttta tgtgaataat gtgatggatt
    11701 acgacaatat cgaaagccgt catccaaaat acgggttttc gcaaaaaatg acgattttaa
    11761 agcaagtaga aaaacaaacc aatgaactcg atgatgtaat gaatttaatt gatacaaaaa
    11821 ctggacattt agacatgcta aaccgtattg gtgagattac tggcatgatt ctcgatgtcg
    11881 tattgtaggt gatgggaatg caaaacgaat taatcaatca attagaaatt ttaatcgaaa
    11941 aaaatgtcaa agcgaccgat gcagcaattt tactcggaaa attagtgcaa gaagagaact
    12001 ggattgatgc agaagaacgc caactaggac tacagcgcga acttgccgct ttgcaaaacg
    12061 aatatcaagc tttaaaaaca atcattggcg aagataatac gcttagaacg ctccaaaata
    12121 cttggacacc tgcggaaaat gccattatag atgaacggaa aaaaatgcta cttgaaaaag
    12181 aaaacctttt acgagtaagt gttacggaaa accaaattag aacagaaatg caattggctt
    12241 tttcggaaca tatggtggat gttattacgg gacatcacgc ggaaacacaa gcagaaaata
    12301 atatgatgat aaacgagact ttttaagtaa acggagggat tttttgtgcg tttaagtgat
    12361 tttaatacgt cattatcggg catgtcagcg gcgcaaatcg ctaatatggt cgctcagcaa
    12421 aatattagta atatgaatac gccaggatac ataagacaag ctgtggatca gacggcggtt
    12481 tacggtgacg gtggtctgct tggtgggaaa caaacaggct acggagtcaa agtgacagac
    12541 attaaacgtc taacaaatac agcacttacg acacaataca ataatcaaat cgccaaacaa
    12601 tccgcttcgt tatatcaaag tggggcgctc ggtcaagcac ttaatttatt tggtactcca
    12661 gggaaaaata caccaagtga taatttagat aatttcttca ccgcttgggc agcattagcg
    12721 aaaaatcctg accaagcaac gaatacaacg gcacttttat ccagtatgtc gatttttacg
    12781 gatcaattaa accaacttca ttcgggctta aaagaattag aaacaaccat tgcagcagat
    12841 acagatgccg cgattcaaga cttaaattca ttaattaaaa aattaggcag tatcaataaa
    12901 gcaatcggaa atgcaggctc caacccaccg aacgatttgc tgaaccaacg cgatcaacta
    12961 cttagtacga tggctggcta tgctgggatt tccgtgagcg cccatccgaa taatccagat
    13021 gtgtacgatg tgacaattgg cggacgtctt gttgtccaag gtgatgaaac gaccgaaatc
    13081 acatcaacgc gaaccgcgac tggctttgaa ttttccgtag acggtcaaaa actcaacatg
    13141 ccagaaggtt ccatcatcgc ttccgttcgt gttaaccaaa atgaaattaa atcgtaccaa
    13201 gaaaaaatcg aaactttttc gaacagccta gcaaaagcat tagatgatat tcaagtcaaa
    13261 aacgtcaata aaacaatgga cgatttgcaa aaaatcaatg atgcgctcaa agcgaatccg
    13321 aacgacgaaa aactactgag caatcgcgat gaacttttgc gtcaattaga aaaattccct
    13381 ggtgtgactc gttctggtga tacgctgacg attggcggag ttgaccacgc gattgacacg
    13441 cttggcacga gtacatatgt aaccgatgtg aatgattttt ccattccaat tttcacccaa
    13501 agctctggca aatggatcct gaatcctgca atcacaagta acgctgataa caagccgttt
    13561 ctaggagtta tcgcggcgga tatcgcttcc ttgaaaacag acaaaaacat tcaaggaaca
    13621 actttcccga gtttcatgga cggaatcatt accgaagtgg cgacggacgc tagtaaaagt
    13681 agcgcaactt ctacggcaga cacgcaagct ttaaattctc tttctgaatc aaaatcatct
    13741 cttgaaggag ttaatattga cgaggaaatg acaaatatca tgcaatacca aagttattat
    13801 gtggccaata cgaaagccat gaacacagtg aacgatatga tgaaagctct cttagccatg
    13861 ttataaggag gaaaataatg cgaatttcaa cgaatcaaca agcaaattca ataattaatc
    13921 agctgaataa tgtctcagga aaccttgcaa aataccaatt acaagtatct tctgggaaaa
    13981 agtatgaatc gatgagcgaa aatcctggtg caacagcgca aattttatcc tataatcatg
    14041 tgcttagtca gctaaatcgc gaaaaaacgg acgtaaccga agcaaaatca ttattaaata
    14101 cggctgaaac atccctttca tccatgtcta catcgatgaa ccgggtaaat gctttagtct
    14161 tgcaagcgat taacggcacg agcgataaag acaatatgtc gcaatcagcc gaagaaatca
    14221 aaggtttact ggatgttctt atttctgtcg ctaactcaga agacgatggc agatatgttt
    14281 ttagtggttc tagcacgagc gtgaagccat ttacaacaga taaaaccact ggagaaatca
    14341 tctataacgg aacaacagaa aataaaaaat tccgcgtaac ggacacatta gaagtagaag
    14401 ttttccatga tggtagtgcg atgacggatg tgtttaacaa cattcaaaaa atcgttgacg
    14461 caatgaaaac tggcgataag gatgctttgt ctgccttgca agaaacaaac agcaagaata
    14521 ttgaaatcat caccaattcc atgacaaata tcggcggaca gaaaaacggc gtaacagcct
    14581 atgataacgt actttctagc aaaattgtcg acttttccga acgtaaatcc aatgtcgaag
    14641 aagtcaatat gccagaagct gtaagtaatc taaataaaac atcgattgca taccaagccg
    14701 cactacaatc cagtgtgatg gtacaaaaat taagcattct aaattatatg tgaggtgaga
    14761 ccaagtggga agttcgattg caagcagttt aatggaccca acgcaatact attcgcaatt
    14821 tatcagtctt caaaaagcta gtttggaaaa agcgaaaacg ccttatcaaa accaaatttc
    14881 cagctaccaa tcacggattg atctttatgc tagtttgaaa aatgctttat ctgagtcgct
    14941 gaaaacgatg agctctttca cgacttatga aagtaaaacc aaactcgcga cttcatccaa
    15001 cgaaacgagt tttactgttt catcaacgag cagttccgtc aacggcagtt attctatcga
    15061 agtccaaaac ttggcgaccg cagacactta caataaagca gtacctgata ttgaggcaaa
    15121 aatcggtgta agcgggacaa tcaaaatcaa tggcaaagaa attaaagttg atgcagatag
    15181 ctcaatgaaa aatgtgatga actccatcaa tagcgccgga gctaaggtga atatctacac
    15241 gctaggcgaa aacatggtcg taacttcttc aacaaccggt gtcgaaaaca gtattaaatt
    15301 tgaaggcgat tcggctgttc tcgatgcact tggattagta caaaattccc cagaccattt
    15361 agctgcagag gacgccaaac tcagaatcaa cggagcgacc gttacaagtg caacaaacaa
    15421 ggtaaccaac tacatcccag gcgtgaccat caacctcaaa aaagaaacaa ctggcgctga
    15481 aaaattaacc atccaagacc aaagcgatga aaaagcagcc agcatgatca ccagttttgt
    15541 aaatacatac aatgcactaa caagcacaat gaaaacctac acgggaaaag gaacgatttt
    15601 acaagcatct gctgtcgacc tcgaagcaaa tcgcgcccta aacaacgtat tccaacataa
    15661 aaaagatggg aatacattat tcgattttgg aataagtgtc gacaaagaag gcgttttaaa
    15721 agtcgatgaa actgcaatga aaaaaatggt agctgaagac ccaaccgccg tcgaaagatt
    15781 tttctttggc attggcggaa ttggcgatga actgtatcaa tctttgaaca aaacatttgg
    15841 ctcgacaggc tttatcagtg atgaaacgac ctcgatgacg aatgaaatca ataaattaaa
    15901 cctcaagtta accgatatta ctagccgaaa tgacacgtta ttaacgaata ttacggatca
    15961 atacaacaaa tggcttgaaa tgatgcaagc tatgcaaagc gacgccatga cgctagacgc
    16021 cctcatcgat ggcatgaaca gttctaataa ataaaaatgg taggtgaaaa aaatgcaagc
    16081 ttggaaacga tacacgcaaa atgaattaaa tacgagcaat cccattaaaa acaccattta
    16141 tatatacgaa cgttgtatta ttgaatttaa aaaattggac aaagcactcg aacaactaca
    16201 tttttccgaa gccgatctta ttcttgataa aatggaaaaa atctttgaag aattaaaatt
    16261 acaattaaat ccagaagccg ggcaagaact ttacgataac attttcggtt tatatgaatg
    16321 gatttctgaa caaattcgcc aaatgcaact actaaaacaa cccgttaata ttgatactat
    16381 cattcatgtt atcacgcagc ttaaagaagg ctacgaggga gtgatgaaac atgaatcaag
    16441 caaagacaca tttggttgag ttaaaagcac tgtttcactc gacggggcaa ttaaacgtta
    16501 ccctcgaaga ataccaagca aaactaaatg aactactaaa aagcaccgaa catttaccaa
    16561 aagatacaaa agaagccatt ttaaaagaaa caagggaagt tataaataaa ggtattcttt
    16621 tcacccaaaa acaattagaa tccactgaaa atgccttttc tgaaaataaa agtcgcaatg
    16681 ctgctaactt gaattatgcg aaatttttct aaaagaaaga aggaaatgac aagtggaaaa
    16741 ttataccacg catattggca actacttgaa ttatcttcaa acagccaacc aagtagtttc
    16801 aaataatatc gccaatgcca atacgcccaa ttttaaagca agtgaagcga gttttgagga
    16861 atcatttggc tcaagtttgc gcgcatctgg tcagaatagc accgagtcgg ccggcaacct
    16921 aacgaaaaca aacacaaaac atttagctgg aaccgatata gacgaaacaa atgcaaaagt
    16981 aacgaccaag agcggctcca tcaacgaaga cggcaacaat gtcaacgtca cttctgaaat
    17041 gattagctta acaaaaaata accaaatgta cgcgctcgct atcagtgcac tcaactataa
    17101 ttcatccatc aacacagcag cccgtggaaa gtaaggtgat aaaccatgtt tgaaggaata
    17161 aacacaagtg gctccgcgtt aaatgctgcg aaacaatgga tggaagtaag ctccaataat
    17221 atcgcgaacg ccgattcaag cgccgcacct ggcgagacac ctttccttag aaaacgcgtc
    17281 gtattatccg aaatcacacc atttgaaaca gctctaactg gaacaaaagg tgttaaagta
    17341 agcgaaatat cgagcgacac aggaagcgtc aaacgtgtct atgatccaac tcatcctaac
    17401 gcaaatgaag cgggttacgt caattacgcg aatgttgata tgacagcaga aatgaccaat
    17461 ttaatggtcg gacaaaaaat gtacgcggca aacacttccg ccttacaagc aaatgaaaaa
    17521 atgatggaaa aagatttaga aattggcaaa gtataaagga gtgttttaag aaatggcaat
    17581 tgaaagtatt aatgcagcaa gtgtcttacc taaagtaacg cttggtgaaa ccgcgaaaac
    17641 agacaatgcg acaggtgccg gaaatacctt cacgcaaatg ctggatagta tgagtgatac
    17701 acaatcaaac gcgcaaactt ccgtatcgaa ccttttaaca acaggcgaag gaaatgcgag
    17761 tgatgtactc attcaaatga aaaaagcaga atcagaaatg aaaactgctg cggtcattcg
    17821 tgataatgta atcgaaagct acaaacagct tttaaatatg caagtgtagc ggttagacta
    17881 gtcgggggag ttttagtcaa tcgtccacac gagaaaaatg gagcgaagtt tttaagatgg
    17941 caaaaataaa aacaatgtat tcgaaattga agaattggca caaaggcgcg attttagtcg
    18001 gcctttttgt cgtagtcacg gtgttattac tctacatgaa cacgcccaaa acagaagtta
    18061 ctctttataa aaatctatcc gaaacaagcc aacaacaagt caccgatcaa ttagccaaaa
    18121 tgggcgttga ttataccgtc gacaaaagcg gtaacatttt agtcgatgaa aaagtggaga
    18181 cactcgttcg tgacaaattt gcggacctag gtattccata cacaggccaa gatggcaatg
    18241 acattctact aaacagctca cttggagcca gtgaagaaga taaaaaaatg caagaaaaag
    18301 ttggtacgaa agtcaattta gaaaaagaaa tcgttcaaag ctatggaaca accatcgata
    18361 gcgcctccgt gcagctaact ttaccagaat caagttcgat ttttgaagaa gcaagccaaa
    18421 aaggaacagc cgcagtaaca ctcaaaacca aaaacaatca aacactaaca agcgaacaag
    18481 ttctcggcat tcagcgcacc gtcagcgcag ccgtaccaaa tgttgctagt gatgacgtag
    18541 cgattatcga tacgaaaaat ggtgttatct ctgaagcaga cacatccaaa gaagaaggca
    18601 gttctgctta taaaaatgaa gtcgatatcc aaaatgcgat tggaaaaaat gtgaaaacag
    18661 atatcgaagg gacactttcc agcatttttg ccctagataa tttccgcgtg aatacaaatg
    18721 tctcggttaa ttttgacgaa atcaaacaaa atacggaaca ttatccaaac gacggaaaag
    18781 tacgtagcaa ccaaaaagac acatcaacag acacatcaaa aggttccgcg aatacgacgg
    18841 aatcaggaac cgcctcaaac gctgacgtac caaattacac ggaacaaaat ggtgatgata
    18901 cgaacaccta tacaagcgaa aaatcaagtg aaacaacgaa ttatgaacta gactccacca
    18961 tccaagaaat caaaaaacac ccagccctag caaagacaaa tgtcgttgtc tgggttgatc
    19021 aaaatgcttt aaataaaaat ggtgttgaca tggccgaatt cacaaaagca attggagttt
    19081 cagctggatt aacgcctaat atgacaaccg aagaagcagg cgcagacgga gaagcagcag
    19141 ccgcaccaac attcgaaggt actttccaaa atggcgatgt taccatcatg ccgatccagt
    19201 tcttagacaa cgccacgcca gcagaaaaag atacaacaga aaaagcagca ccagcaagca
    19261 aagcctggat ttggtggctt gcaggaagtt tactcttcgc catcattgca gctggaatta
    19321 tcgcctacat tatcttcctt aaacgtaaag aacaactaga agaagcatta gaaccagaag
    19381 aaaaagacta cattccagcg gaagaagcaa tcatcaaccc agaagaacat ccagatttca
    19441 acttccaaac agatgcattc gatttatcag aaccagaatt aaaagcccgc aaagaaagct
    19501 tgaaaaataa actcggtgaa atggccaaag aagacccagg gcgcgccgca gcagtcatcc
    19561 aaaaatggct caatgaaagg caggaataac aatggcagaa acactcaaag aaaccttaga
    19621 agaaacaaat gctgaactag aaactgtcga agtagaagaa acggaagaaa aaacaactac
    19681 ttcagcagat tcaggtattt caagacgtga aaaagccgca cttattattt ggagcctcga
    19741 cgaacaaatc gcgaccgaag tggtagattt gctccctgac gcatccaaac aacgccttgc
    19801 acgtgaaatg gccaaaatga aagaaatgga cggcggcgca gtagaagaag caactagaga
    19861 atttttaggg gaattagaac ttctttcagg aggaattgct aaactcgacc gcgaacactt
    19921 acaacgcttg ttcccagaca tgacgacgga agaactaaat caactcattt acggggtaga
    19981 agcagaatca cgtatcggcg aaaccgcgct agatatttta cgagaaattg atgatgttga
    20041 ctccttgttt acaattatta gcgacgaatc gccacaaacc atcgcgatga tagcttcata
    20101 catgaaacca gaagaagcat cgaaactact agccttacta ccggaagaaa aaatgattaa
    20161 cactgttatt ggtatcgcga gcctagaaca attcgatagc gaagtcatgc aaaacgtttc
    20221 taatttacta agaattaagc ttgataccat gtcgaatagc tcactgaaca aaacagatgg
    20281 cataaaaaat gtcgcaaata tcttaaacaa tgttacccga ggtttagaac gtacaatttt
    20341 cgaacatctc gacgccgaac aagccgaact ttccgaacgc atcaaagaga aaatgtttat
    20401 gtttgaagat attattctac ttgataacat gaccttgcaa caagtgttgg cagaaattca
    20461 agacaacaat aaaatcgctc gagcactcaa aaacgaaaaa gaagagctca aagaaaaaat
    20521 tctatcttgc gtatcgaaaa accgtcgcga tatgattacc gaagaattag aagttcttgg
    20581 cccaatcaga ctttctgacg tcgagcaagc ccaacaagat atcgccaatg tcgttaaaaa
    20641 tctggaaaaa gatggcaaaa tagttatcca acggggggaa caggatgtcc ttatctaatc
    20701 cgcgaatccc aaaaggtaaa gtcactttat ccgacgtgaa aatggaactg ttttatttgg
    20761 atgatataga agaaacagaa gaagtcgagt caccctactc gaaagaactt gaacaactag
    20821 aaagtcatca aaaagaactg gaaaaacacc tatctgccat cgaaatcgaa cagcaaaaat
    20881 tagctaacga aaaagcagca cttcaagctg aacgccaagc cattgaagaa ttaaaacgcg
    20941 aagctgaaac agaaatcgaa gcaaacaaac aagcttttga aaaagaaaaa acacaaatgt
    21001 atctaactat caccgatttc ctttgggatg aaagtatcga tcttgcagaa agaatcgtcc
    21061 accaagcaat cgacacgcgc caaatcgaag tcttaccaat gctaactgaa gtcattcaaa
    21121 aactcccagt tgctttcgac aaactaaacg tcactaccca tccagagacc ttaaaagctc
    21181 taaaagaaga aaacacaggc acaaaatacg actggctttt agaaaatatc cattggaact
    21241 tcgatatgcg actcgattac ggcgaattta ctgtagaaga agaaaaggaa tacttcgact
    21301 accgcatcac cgaaattttc caaacacttc ataaacaaaa cgccgaacgg aaaattctag
    21361 gaggcgataa accgtgaact ggtcgccaaa aaccgaagct tggcaagaac taaaaaacac
    21421 cgttccatac atccaaaaag gaaaaattca cacagtccaa gaacaagtct atatttccaa
    21481 aggccctcaa gtgaaaattg gtgacactgt catggtcggt gaaaataaag tgctctgcga
    21541 agtaatttct attgaaaaag aaaacaacat gctactcccg tttaatcaaa gcgacaaagt
    21601 ggcatacggt gattgggtgt acgtaacgga tacgaaaatt acaatcccgg cagacgaata
    21661 cctccttgga aaagtactca acgcatccgg cgatatttta aacgaagaag ctggagtggc
    21721 taaatttaaa caaaaaatgc cgcttgaagc tccaccaatt catgctttta gtcgagcaga
    21781 aatcactgat acgctcgaaa caggcatcaa agcaattgac gggatgttaa cgattggaat
    21841 cggtcaaaaa attggtattt tcgccggatc gggtgttggt aaatctactt tacttggaat
    21901 gattgctcgt aacgccaaag cagacattaa tgtgatcggc ttagtcggcg agcgcggccg
    21961 tgaagtaaaa gatttcttgc gtaaggatct tggagaagac ggactgcgca aaagcgtgat
    22021 tgttgctgct acctcggacg aaagccatct tatgcaacta cgcgccgcca aactagccac
    22081 ttctattgcc gagcatttcc gcgaccaagg aaaaaccgtc cttctaatga tggattctgt
    22141 cactcgtttt gctgatgcaa gaagaagcgt cgatatcgcc gtcaaagact taccaatcgg
    22201 cggcaaaacc ttgctaatgg aatcatatat gaagaaattg ctagaacgtt caggtaaaac
    22261 gcaaaacggc tcgatcactg gtatttatac agtgcttgtt gatggagatg atatgaatgg
    22321 tccagtcccc gatctagcgc gggggatttt agatggacat atcgttctca cacgtgaact
    22381 ggccaccaaa aaccactatc ctgccattga tgtcctcggc tccgttagtc gggtaatgga
    22441 agaaattgtt ccagaaagcc agtggaaaac agcttcgaaa attcgcgaat ggatgagtat
    22501 ttatcaagaa aatgaactat atttcaaact tggtacaatc gaacagacga gcgacaatgc
    22561 ggcgattttt acaagtaaag aaaagtctta tttcatccat caatttttaa aacagttgcg
    22621 ggatgaaagt gtcacgcttg aagaaacgag taagttgatg gaaacgttag tataacaaag
    22681 gagtgccgtg gatgaatcca gtagaacaag taataagtgc tagacaagcc gagtttcaaa
    22741 gcgcgttcga agcagcgaaa caatcggcta ccacttttga aacaaaatta aacgaacgct
    22801 taaatgagac cacaactgcc aaaacaacta gtgtactaac tgtcacagat gccgaactta
    22861 cgcgcgctcg agaagcatat gaagcattaa tcaatcaatc cgacaccaat tctgccgcgt
    22921 ctgcttcaag cacaacaacc gagactccca ctacatcaac aggcgaatca acaaactgga
    22981 acaactacca aatcaaacca atcagtgcgg aaaatgaagg aaaatatagt gatttaatca
    23041 aaacttcggc cgcaaaatat ggcgttccag aagcactcat caaacgagtc atccaagtag
    23101 aatccaattt taacccgaac gttgtatcaa gtgctggtgc aacaggttta atgcagttga
    23161 tgtacggctc gaatcgtaca gacccagcaa ctaatatcga cgctggaaca aaacaattgg
    23221 caggttatat taaaaaatat gatggcgatc tcaaactggc attagcagct tataatgctg
    23281 ggccaggaaa tgtccgcaaa tatggcggcg taccaccatt caaagaaaca caaaactatt
    23341 taacgaaaat tattgggtaa gggagaataa accatgggaa actggcaaca aaagtgggaa
    23401 tcatggcgcg atatgactgt agcaatgcaa caagaaatca aaattgaagc agccgaaaaa
    23461 gtgacttcct acataaaaaa tgaccaattt gaagaagcaa ttaacgtcat cagacaaacc
    23521 gaaaatctcc taaacgaact ggattttgaa actaaaatga atcgtgtcga agaacagctc
    23581 caagcattca catccgacca agaagcagct aaatcatttg aagcaagcca gcttcaaaac
    23641 ctagaaaaac caagcacaaa agtaagcttc gacctatcac atgtaaaatc agaagcgatc
    23701 aatcagttca ccaaacgcga tttcaaccta gtagactcaa atgataccca catgcaattc
    23761 ctcaaaggca atcgaaattt ttatatggac attttcaatc ccgaagaaag cgaagaatac
    23821 cactacgcta atcttgatga gaaatgccaa tacaaaaaca tcggcttcat ttgccaaaac
    23881 gatgcagcag ctgaaatcgc aacaaaatta acaaacgaat ggctcgaaac tttagaagct
    23941 ccgaaaaaga aatttttaac ggtcaacatt gctaatttaa acgcgatgaa acaaaatcaa
    24001 gaagtacttt ttcaatagaa aaaacctgtt ctcgccaaag agagcaggtt tttttataca
    24061 aacaggttga caactaacct actttgtatt actatatact tgtacctagt aacaactagt
    24121 agaggagtga attcaagtga aaggactaac cgagttactc aaaggtagtt tagaaggaat
    24181 gattttggag cggatttcta gaggagaaac atacggctac gaaatcacca aatacctcaa
    24241 tgacctaggc tttgatgaaa tcgtcgaagg aaccgtctac accattctcg ttcgtctgga
    24301 gaaaaaagga ttagtcgaga tagaaaagaa aaaatcagaa ttaggtccac cacgaaaatt
    24361 ttacacattg agcccagctg gtgaagaaga actagctatt ttttggaagc gttgggattt
    24421 tattcaagga aaaatcatgc aggttaaagg agggcaagcg taatgtttaa ttggtacaaa
    24481 aaataccgcg aagaaaaacg agattacaaa cagtacaaaa aacgaatagc cgctttgcca
    24541 gaagattaca aaaccgcaat gaaagctatc gaaacctatt tatggaactt tgcaaaaggc
    24601 gctgggatgt ttgaaatcct aaagaatgta ctcgagatgt tcgaaaacgc cgcagccgac
    24661 aacctagaat taaaagccgt tgtaggagat gacctagcgg aattcgccga caacttacta
    24721 agtgaatttc cggaagaaac atggatggat aaacaacgtc agaaattgcg agattcgatt
    24781 aaataaaaaa cagaaagcct ctcaaaaaaa tgagagactt tctgtttttt atttgcgttt
    24841 cttaacaacc tcaataaatt catctaacgt ttcgtgggtt tttatttgct gattacacac
    24901 atcactatcg tagcaaatgt aattaccatt tgtcgtataa atgccgtcac tcgaagattt
    24961 cgttttcgcc ataaagagcg atactttgga atgcgagtga caaatcgaac aaacaccctt
    25021 ttgaatctct gtcgaaatag ttccttgtac gccgaccaaa tttccgtcct cgtaagtcac
    25081 gatatattta cgttgctgag cgatatcatt ccagccgtaa aaagtatagt cgcgcaaatc
    25141 tagtttagac caggcgggaa tttttaattt tttcgttttc gcaaaaagtt ttttaagttt
    25201 cacatcacta ggtggcgcga aaggaatcac ataggctttt aacccatcta aaaacggctc
    25261 tgcttctttg gttgaagtaa tcgcatggag ctcgctaaac agttccttat gctcctctag
    25321 cacgctttcc gggaatagtt cattgatttt ctcctctgtt aacgatttta acgccttcaa
    25381 agtcgaagta tcattggcgg accggtatgc gcgtgaaaca ttggctaatt gatttttgat
    25441 aaaattatat tggtatggct cgataaactc tttcattata attctccttt aatagtttaa
    25501 tgttggttaa actagctgaa ggattgaaga gtttatttca ctcttacttt ctaaacaatc
    25561 ctaaagccat tgttagaaag tcgagagcag tgcaattttg tttgcatctc tttgatcacc
    25621 accttgcctt cattataagc acttctgaat agttcgtcaa ttctctttta tgaatactct
    25681 tttaaaaaca gggtaaacga aaactattgg acattagaga aaacatccat gggaggagaa
    25741 agtaaaatga aaaaagtaaa agcaagtgaa acactcgtac aaacattaaa aaattggggg
    25801 attgaccacg tatatggttt acctggtgat tcgattgata cagtagttga tgccttacga
    25861 aaagaacaag aagcaatcga atttattcac gttcggcacg aagaagtggc gacactagcc
    25921 gcagcagcat ataccaaatt aacaggcaaa attggtgtcg cattatctat cggcggcccc
    25981 ggagcaattc atcttctaaa cggcatgtat gatgcaaaaa tggatcatgt gccaatgctc
    26041 gtactcgctg ggcaagtgac aaccgacgtc ttaaacaccg gctttttcca agaagtcaat
    26101 ttaccagcga tttttgaaga tgttgccgtg tataataaac aaattgataa tgccgaaaca
    26161 ctcgcggatg tggttgatga agcaatccgc accgcttata aagaaaaagg cgtcgctgtc
    26221 ctaacgattc caaatgatat cccgtcacaa gtaattaaag cgagccttga agcaaaaaca
    26281 gtcaaattcg aacaagaaaa tccaaaacta gatgaagcgg caatacagga agccgtagca
    26341 cggattgaaa aagcggaaaa accagttatc ttagctggat tagggactaa acacgctgga
    26401 ccagaactaa tcgccttctc agaaaaattg aaaatcccga ttattcattc cttaccagca
    26461 aaaaccattg ttccagataa ccatccaaat gcactcggaa accttggtaa aatcggaacc
    26521 aaaccagcat atgaagctat gcaagaaact gacttactat taatgttcgg gaatgattac
    26581 ccttatagcg attatttacc aaaaaaagcc gactgcatcc aaatcgatat tgacccagcc
    26641 aaaatcagca aacgtttccc tgcaacagtt ggtttagttg gcgatgccgc agaaatcatc
    26701 ggtaatttaa ccgcgaaaac cgcacctgta gaagagcgta aattccttca agcatgccaa
    26761 gaaaacatgc aagaatggtg gaaatggtta gaagaagaca tcgcacaaac aaccgatcca
    26821 atcgccccag aagtcgtaat ggcgaacatc caaaaaatcg ctgataaaga tgccattttc
    26881 tctatcgacg taggaactgc aactgtttgg agcactcgtt atttacattt aaccccacaa
    26941 aatgacttta tcgtttccgc gtggcttggt actatgggct gcggtttacc tggagctatc
    27001 gctgccaaaa aagcattccc agaccgccaa gcaatcgcca tcgtcggtga tggaggcttt
    27061 tccatggtca tgcaagattt cgtcactgca gtaggtttaa acatgccaat gattgtcgtc
    27121 gtgttaaaca accaacaact ttcattcatt aaatatgaac aacaatcagc tggtgaacta
    27181 aactacgcca tcgatctacc agacatcaat tacgcaaaat tcgccgaaag ttgtggagga
    27241 attggtttcc gagtagaaaa aatggcggac ctagaagctg ctttcggaaa cgctaaacta
    27301 gcaactaagc cagtaatcat cgacgtttcc gtggacagtg cagccgctcc actacctggt
    27361 aaaatcgtga tggacgaagc gctcggttat actaaattcg aaatccaatc agtcttagaa
    27421 gaccatcgtt tcgcaaaaat gccaccactt aaaaccattt tacgcagatt tttataaaaa
    27481 acaaataaaa aaataacatt atcacccgtt tcatgccgat tctcgctaat tattataacg
    27541 ttttttatta aaactaatta ttttacaata aaatatggag tttttttaaa aaatatgaga
    27601 taataaatta gaattagaga ataggagtgt ggaatgggtg aatttaatta aaaatcgtaa
    27661 attgaaaaca aaattaagca tcaatattgt tataacgacc atcatgttaa tcggacttgg
    27721 cgcgactagc tttcttggct ttcgtcatgt agcaacactt tcagataata tggttgataa
    27781 taatgtcgca ccgatgaaag aaatcgcaaa aatccaaaca aacatggcgc aaatcaatat
    27841 cgacatcctg accatgttcg acactattaa cggaaaatca gctcttataa aagatattga
    27901 tgatctttat gccgaaaatg accaagcaat tcataatttc aaaaaagcca atttaacagc
    27961 agaagataaa aaacaattag cgtactttga agaaaaacta gcggacatga aatcatccgc
    28021 atcctcagta atcagtgaca catcaagcgc actagacgac gcagaattac ttggagcgca
    28081 aaacagatac taccaaaacg tcaaaacaaa atttgacgat gcaactaaac aattaaacgt
    28141 tttaaatgaa atgaactaca aagaagtcga aaattcttct caagcaattt ctgactttgg
    28201 tgtaaaaatc agtatcatat tcacagcagt tattattgcc gtgctaattt ctctattcat
    28261 ttttaacgct tatattacaa gagtgattct aaaaggaatc cgacacttgc aaacagctgt
    28321 acataaagta gctagtggag atttgtcgta ccgcagcact tataacggta gagacgagct
    28381 tggtgatatt acaaacgact tgaatgaaat gagcgaaaac ctaagattaa tgattgaaga
    28441 cgttaaaaaa gcttctacag acgttaaatc ttccagtgac aacgttatta ttagttcgga
    28501 aattatttct gcaatgacaa cagaaatgga catcgaaatg aaaatgatgg gtgaacagat
    28561 ccaaacacaa atcggcagca tgaaagaaag cacggatgca atggatcaaa tgactggcgg
    28621 cgttcaaaat gtggctgaat acgcgcttaa agtatctgat ctaacaaaag attccgcaga
    28681 aaaaacgaac gatggcattg ccgttatcaa taatctcgtg tctcaaatgg atcgtatcag
    28741 cggcgttatg cgttcaagta cagacgttgt ttctcaatta gttaaccgcg ttggtgaagt
    28801 ggaaaaagcg ctggataccg ttacaaatat cgctgaccaa accaacttgc ttgccctaaa
    28861 tgcggcaatc gaatctgctc gtgctggtga acatggccgt ggatttgcag tcgtagccga
    28921 agaagtccgc aaactagctg aacaatcacg acttgctgtt gttgacatta atactgttct
    28981 gaaaaaaatt caaacagaat caaaaactac tatcgaagta atgaacacag gtctttccga
    29041 atcagaagct ggccaaaaaa tcatttctga aacggaagca actttcacag acttactcaa
    29101 tcgtgtcaat gatatttccg ctcaaatgca aaatgtatct caagaaaccg aagaaatggc
    29161 tgcgggaatt gaagaagtca acacgtcaat tagcgacgta acagaaattt ccaatcaaat
    29221 cggtgaaaaa tccactgctg cacttgaatt cgcagaagta aacaaaatga aagtggacga
    29281 gctagttgtt atctccgaag aaatgcaaaa aatttccggt tcattagaag ggtatatcgc
    29341 caacttcaat accgaagtga gcgaagaagc ggtcgaagta acagaagagc cagaatcaga
    29401 aacaaaagat ccaggagagc cagtcctagc agaaaatgtc taggaagcat gtataatgcg
    29461 aatttggata aaatcactgc ttgtcattac agcgtgtata tttagtttga cccttctaaa
    29521 tacgaaatat accttttatt caccaaccgt caaactcgaa agcgccaaag tcgtttataa
    29581 attagacaac gaacctttta atgtaagatt agatgtgcca ctagtgaatc aaatggatgc
    29641 tcctacgctt tttaatggct gcgaagtaac gagtttagca atgctcttac aattcaatgg
    29701 aaagcgtgta acgaaaaatg agttagcgaa taatctccca acaacaccaa tcgaacaaaa
    29761 tggtttacac ggtaatccgg ataaagcatt tgttgggagc attagcggcg atagccctgg
    29821 tctaggcgtg aatcatgctc ccatagctaa tctggctgct aaatacgtta atgaagcaca
    29881 cgtccacgat attagcggga atagcattca agacatcatt actgtactca gcacaggcgc
    29941 accagtatgg attatcacta ccaccgacta ccatgcaccc aaaaactggc aaaccgtcca
    30001 aacaaaagaa ggtaaaaaga aaatcacgta ttcgatgcac agtgtggtaa ttaccgggtt
    30061 cgataaagac aatttttata ttaatgaccc atatggacat aaaaaccgtg ccgtaaaaag
    30121 aagtgtactt gaagaaggct ggtctgctat gggaaagcaa gccatttacc taagtcaccc
    30181 ataaaaaaat cgtttgaaag catatctcat gctctcaaac gattttttat attttcttct
    30241 taataaatag gacgacagca agcgcgacaa gcaccactcc aataacaatc ggccaaaccg
    30301 aaaatgcatc tccggtagaa ggaagaaagg aagcagtatt tgtactttca aatgcgacag
    30361 ctgtactttc tcggaaataa atgaatccaa gtgaaatgaa aacagcaata ctagcaacta
    30421 atttttttgc aaaaaccatt cagctcgctc ctttttgtat cataactata ttattagtca
    30481 tttgttattt tttgtcaatg tatagaccaa ttttaaacaa acggctatat ataatgcttg
    30541 acctagtata catattattg taaaatgaat ttgtttcctt gaaaagtagt gaaggaggat
    30601 cgtacaatta aatagaagcg ccagaactga ttggaacgaa aatacttgaa ggtgaaatcc
    30661 ctgaaaagta aacagtcagt tgacgaggag gagattaatc gaagtttcgg cgggagtctc
    30721 ccggctgtgc atgcagtcgt taagtcttac ttacaaatca cttgggtgac caagtggaca
    30781 gagtagtaat gaaacatgtt ttttaccctc caaggaaacc aaaaaatgta gagggcttga
    30841 aattggataa gtctgccctc aagtttatta ttggaggaat ttactatgtg tggaatcgtt
    30901 ggatatattg gaacaaataa tgcaaaaggc attttattag aaggacttga aaaattagaa
    30961 taccgcggct atgactctgc gggaatcgct ttgcaaaaca aagacctagt aacagtagtt
    31021 aaagaaaaag gacggattgc agaccttgcg agccttgtac caagtgatgc attcggtaca
    31081 acaggaatcg gacatacacg ctgggcaacg cacggtaaac caaatcacga aaacgcccac
    31141 ccgcaccaaa gcaaatctgg tcgttttaca atggttcata acggcgtaat cgaaaactat
    31201 acccttttaa aagaagaata cttaaaaaat cattcatttg ttagtgatac ggatacagaa
    31261 gtaatcgttc agcttattga actctttgca gcagaacttt cgactaaaga agcattcaaa
    31321 aaagcgttat cgttacttca tggttcttac gcgatctgct taattgacca aaccgataca
    31381 gaaacactat acgcagcaaa aaacaaaagc ccattactaa tcggaaaagg cgaaaacttc
    31441 aacgttattg caagtgatgc aatggctgtt cttaaagaaa cagatgaatt cgtggaaatt
    31501 atggataaag aaatcgttat cgttacaaaa gacggtttta cattagaaac attagaaggg
    31561 gaagaaatta gccgcgcgag ctacactgct gaattagatg catctgacat cgaaaaaggc
    31621 acatacccgc attatatgtt aaaagaaatc gatgaacaac cagcagtaac acgtaaaatc
    31681 atccaagctt accaaaatga agctggggaa atcaatgtcg atcaaacaat tcttgatgaa
    31741 attttatctt ctgaccgtat tcatattgtc gcttgtggca cgagctatca tgctggttta
    31801 gtcggaaaaa atttaatcga aaaaatggtg aaaattcctg tagaagtaca tgtttctagt
    31861 gaatttggct ataatttacc gctaatgtct aaaaagccgt tattcatttt cattacccaa
    31921 agtggggaaa cagctgatag ccgccaatgt cttgtaaaag tgaaagaact tggttaccgg
    31981 acgctgacat taacgaacgt accaggctct acgcttgacc gtgaagcgga tcattcgatg
    32041 tatctctatg ctggacctga aattgcggtt gcatcaacaa aagcatatac cgcacagatt
    32101 tcggttttag cagtacttgc agtttcactt ggtcgcgaaa ttggtgatgc tgaagcgctt
    32161 agcattaatt tagctgctga attaggtatc gttgcaactg caatggaagc aatggtttct
    32221 agtaaagaag ttatcgaaca tattgcgggc gaatacttag cgacttctcg taacgccttc
    32281 ttcttaggta gaaacatcga ttatttcgta gcgatggaag cagcacttaa actaaaagaa
    32341 atttcatata ttcaagcaga aggttttgca agtggggaat taaaacatgg tactattgcg
    32401 cttattgaag acggcacacc agttttagcg cttatcacgc aagaatctat caactggaat
    32461 attcgcggaa atgtaaatga agtcttagcg cgtggagcaa aaacttgtgt atttgcaatg
    32521 gaaaacgttg cgcaaccagg tgaccgcttt gttattccgc aagtgcatcc attattaaca
    32581 ccactagcga gcgttatccc ttgtcaatta ttagcttatt acgcagcact tcaccgtgac
    32641 tgtgatgtcg ataaaccaag aaacttagca aaaagtgtca cagtagaata aagtattcaa
    32701 gaccttttcg aaattagaaa aggtcttttt ttatgtaatc aataaatttg cacgacgccc
    32761 ttgttatact ataaacttag agaggaatgg gggaaatcag ccaatggaag tatcacacgt
    32821 aacactcgaa ccaaataaag atagccgccc cgcagtttta acaatcggca aattcgacgg
    32881 ggtacatatc ggccatcaga ccattttaaa tacagcctta tccataaaaa aagaaaatga
    32941 aatattaacc gctattagtt tcagtccaca tccgctttgg gctttaaaac aaatcgaaat
    33001 ataccgcgaa atgctcacac caagaatgga aaaagaacgt tggctcgcgc attacggtgt
    33061 cgatcattta atcgaaacag cattcacacc tcggtatgcg gaaacgacac cagaagagtt
    33121 tgtcagagac catttaacca atttgaattt atcgcatatc gtcgttggtt ctgaatttaa
    33181 ttttgggaaa gggcgcgatt ctgacgtaga tttactccgg gacctatgca agccctatga
    33241 tattggtgtc acatctgtcc cggttattga aacaaatcaa accaaaataa gttccaccaa
    33301 cattcgagcg tttattcggc gcggtcattt tcaagaagcg gaagagctct taggccatcc
    33361 gtggtatatt actggaattg tagaaaatgg tgagatgact ggcttagatg attacgttct
    33421 cccggcaaca ggtacgtatc aaacagactc aggaatagtg aatgtaacga acaatcgtac
    33481 catcgaagtc ggattgtcag atggacttca acaattacat atgaaaaacg aactttccga
    33541 gtaattagga aagtttttct ttacatttta taaaattagt aatatactaa tttagtaaat
    33601 tactaaaaat taaaaggaga aatcttatga agattccaac taccttaaaa cataaaccag
    33661 taatcgttgt tgaaaattat gaagaagtag atggcaagaa cgcttaccat tctgatgcga
    33721 aaggactttc gctcggactt gcacagtgga atgatcgggg taaagtagat atttcagcca
    33781 aagtatggcg tcatactggt gataaatggt cacgccaatc cgaagaactt ccgctacacc
    33841 gtgtgcttga tttggccatt ttaattgcta gaaccaaagt ccatttcaaa gatgcttacc
    33901 gcttacctca tttttatgac aaagaaaatc ctatgcttga tcgcatcggt ttgcaaggag
    33961 atgcgctgac tattgctgtt tgtgaagata acgaatatat cgatgaggac atgcaattgt
    34021 tcgaacaagt tttaaaaaat gatgatgaac tcctcagcga acgcctcaaa acattaagca
    34081 aactattaca agaagcaggt tattaaggac gtgaaataat tgaataaaga caatcgtaaa
    34141 gaactaattc gtgcatataa agaaaaatct cccgatgccg gcgtttaccg ttttatcagt
    34201 acaaaaagtg gtaaatcctt aattgataac acaatggatt taaaaggaat cgccaataaa
    34261 cttgctttcg gagtgaaaat tggagcggga aatatgctac caccagaaat ggcaaaagaa
    34321 gcaaaggaat atggtattga caccattcaa tttgaaattc ttgaaaaagt agatattaag
    34381 cccgaaatga caaaagaaga tattaaagaa gaaaatgatg tactccttag tttatggcta
    34441 gaacgtgaag atatctgaga cctttcactt ga
//
LOCUS       DASDYK010000018        34222 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.018, whole genome shotgun sequence.
ACCESSION   DASDYK010000018 DASDYK010000000
VERSION     DASDYK010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 34222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34222
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.018"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(455..1045)
                     /locus_tag="U0308_000903"
                     /pseudo
     CDS             complement(455..1045)
                     /locus_tag="U0308_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738130.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1368..1982)
                     /locus_tag="U0308_000904"
     CDS             complement(1368..1982)
                     /locus_tag="U0308_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003770430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315877.1"
                     /translation="MINLEWEELDRLEVDGKLEQILKFSYDAWISDPKNTHFFVRAFF
                     LKWYLQIDNFDIESYEEQDEKLRYMYSYGEQELLDIPEVKWIMGYCLSLNPECFMGEE
                     DYDDLRLKGKKYLREASLANPEDVFLKDSYYASGGKSVKEFVKWESENREQLANYLQA
                     NFNYDSLFSDYFKEMVTMYISGKIQEKGILERLFSKLKKKDKGN"
     gene            complement(2014..2916)
                     /locus_tag="U0308_000905"
     CDS             complement(2014..2916)
                     /locus_tag="U0308_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315878.1"
                     /translation="MSKTVDGVTTNYHYDGDSINVLYETNNDGKVVRQYVYSDDGIRL
                     AMKMNGKSLYYHYNADDDVIALTDEAGKIVAEYTYDAWGNVLKNNASTEEAKANSYGY
                     KGYTYDKEIEQYYLMARYYEPEQGVFTAVDPDPGDEDDPQTMNGYNYASNNPVMLADP
                     DGLWAGVLFKFAAKGGKTAWKYAKKGAKKVSKSMKKWWKGFKAKPKKRQETKQTNSQL
                     KSFDSDKRKHITEPEHQWNSVSDGSWGQVQALIKRTMRSGKESSYKKSARKKTLIYNK
                     RKIIVTFVRKDGKIKIGNAWVERK"
     gene            complement(3193..3756)
                     /locus_tag="U0308_000906"
     CDS             complement(3193..3756)
                     /locus_tag="U0308_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315879.1"
                     /translation="MLNLQWEDLDCLEVEGDLEKILDYSYNAWNLDQRNTRYFVRTFF
                     IKWYLIIDDFDIEDYETQEKQLMNMYEYGEKKLLDVTEVKWIIGYCISLNPEYFMKQG
                     DNYEEVRIKGDKYLHELALANPDDIYLKSLDYDFGTEGHSHERYLDWKRANREQFLLY
                     VEENFNYDSLFSDCFKELITMDLDKKD"
     gene            complement(3783..3995)
                     /locus_tag="U0308_000907"
     CDS             complement(3783..3995)
                     /locus_tag="U0308_000907"
                     /inference="COORDINATES: protein motif:HMM:NF026872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315880.1"
                     /translation="MRKKHDWNSITDGSWGQVRNLINRTMRNGKESAYGSARQKTMKY
                     GKRTIVVTFKRVEGKIRISDAWVKTK"
     gene            complement(4077..4532)
                     /locus_tag="U0308_000908"
     CDS             complement(4077..4532)
                     /locus_tag="U0308_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
                     /protein_id="HEM2315881.1"
                     /translation="MTTNYHYNADDDVIALTEEAGKVVAEYAYDAWGNVLKNTASTEE
                     AKANSYGYKGYTYDKEIKQYYLMARYYEPEQVAFTAVDPDPGDEDDPQTMNGYNYASN
                     NPVMLADPDVLWAGVLFRFAAKGGKTAWKYAKKGAKKSFKEHEKMVEGI"
     gene            complement(4669..5457)
                     /locus_tag="U0308_000909"
     CDS             complement(4669..5457)
                     /locus_tag="U0308_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315882.1"
                     /translation="MLKIKKQAQSIYAFKETGGEVLNFQIEKNCLKLFSGEEISCEIN
                     DEIISDRYFKVKEVKLSDEKVCIFCHDGVYDYLLISCIGKHFKYPLGEGVADFLVLND
                     EAYVIYSEEGMFGSEENLPIAQLGLIKIDIFTGEITGLLDDSILETLIDVQSMSCKNK
                     RIRILCYEENDDDFTLDYDLTSKKVQNKVVINYTVDELLSVGDNFYARYQNHIYKVDE
                     SMEITKEIIIDKKVYDEAYAISTGYSEVVLESENEFNIVQLSKL"
     gene            complement(5474..12112)
                     /locus_tag="U0308_000910"
     CDS             complement(5474..12112)
                     /locus_tag="U0308_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
                     /protein_id="HEM2315883.1"
                     /translation="MKIHAKAKKILVSLIAIMLFLSLIPGYAPMAEETSTGVAEPEKK
                     AGEQAPTEVKDERTENEVVFDNHDGSFTKQIFADPINMEVDGEMKRIDANVEKEADSD
                     MIVPKQTPLELGFLDKMEDGAYQKLTKAGAEVTFRLKGARTGENEQAVTDQPATYKEN
                     EVTYENVFPKTDLRHLTFPQSVKEDIVLHEPNQVDTYVYQIETKLGLELAKNGDVLFK
                     NKSGETMYTLPKPVMTDSNVGAETGEAALSENVSFEVKQLTKTVYELQLKVDTAWLND
                     AAREYPVYIDPSVRLDEVYNANINSAKPTETNIGSKLWDSGQNAYTLKLGKWDNSTGN
                     NAAYLKMDTSTLNKATISKATLKVYNIWHMSPTVKNDLWYYESNANWSPWQVTWNTAP
                     ATTRIGSVNVGRGEWANLDVTKTVQAWASGVRPNNGFRLATNIDQNYWKKLVASENNK
                     NYPYLEVNYTYAQPEKPTVKTNSNGVGTGTGYMDLSWKAVPGATSYNIVISNGYNYEY
                     INTKSTATTWSTKGKKIFPTNDEIANGEFEFHHDGKGTEFALDPRAQYENAFQAGSTF
                     GLRNLTRYLFRVQAVFPGGESPNSDLVFAYMPIEKPQPPAAKAYSNLAHKETGYVELN
                     WEKSPMADGYKVLVFNGKAYEEYDVGAETKWTTQNKGIWPTKEEIAEGKFALHHDGKG
                     DELAKDPSPVYTNSGGNYKERTNYWFRIVAYQKAGNNATSIQSEPATPSLPEVVNKQL
                     GMVDYWTSVPVRGGEVNATNGNFLFHETDFNLEGRGPSINVDRTFNSQDDATGIFGKG
                     WTSTLEEKLIEEENGNIVWVESDKKVHRFTKKGDKYEAPPGIYSEITKNADGYLKIEE
                     DKSETRFLADGRLKSEKDTKGNELTYEYTDGKLTNMRDASGRTVTLAYEGELVKELVG
                     PEDRKISYTYNDKQELISSSTARGKIYCYGYTDGLLTSIYDPKHTEEKPYETTFAYEE
                     EKLTEITDPVGKKTTLSYDMEEQQTTLTNEKKKKTIYSYNDAGNPKKEIVDADGLKLT
                     TTYTYESNNLVKEVNPKGQEETYSYDADGNITQATDAYGTESYTYNGNNDVTSATDTE
                     GRKTTVTYDGADAVSETLATESQVSSVTQYDAYGNPIRGSGELSSAGNLLQNSGFEKG
                     AGVSNWTLIQSDAKGSMTFDSTQSAPGTLGGSGSVKLTSEANSTVKGYSSVTQRVDVE
                     PETTYTFSAWIKTSGMTNADAILIGRLQDANAKDITDAGVWQSNRATSIKKNGGWVKR
                     QLTFKTSKNTRQVLLYLDNEQPAPHKGKGTIWYDNVQFEKGSVASSYNPVVNSSFEEH
                     NGTLPTGWARSGNTALTQAKVVDNEGYSGDSAVYFERKATSEAYTHIAQDVPVNQKEA
                     KALTISALSKSEDAKSNGSVATMSNDYSVWGTINYQDGTTSSVQGQFPLGTNDWNRSA
                     VVIKPTKPIKSVKVYTMFRNGLTGKAWFDDVRVIEGEVLTKNEYDASGNYVTASYDEE
                     GRKISFTYDIYGNKTSETDEKGNKKTLTYDADNALIDTKLANGTSVAYKYDDNGNTTE
                     KNVTASGKTQKNIYEYDVDNKITAFTDALNRTIKYEYDAAGNKTKAIMPNGRVTESTY
                     DSADRMDGIKWNDKLAFKFQYDPNGNQTKVTDEINSIVTDKTYDDANRITKVAERGGD
                     VSYTYKDKPTKDNKGKTDKVGEVAINHGDYTAKTSYTYNDLDRNTRVNDGSKNAYFEF
                     DEFGNINVYTAGNGTAANYTYDSTQKVTNAAISSASGTQILDENYTYDAASNRTSIDN
                     KQDGKTTYEYDAVNQLTKETLPDGTVKAYTYDGFGNRTQVAISGNETKTIAASYNDGN
                     QLVSWNGEALTYDANGNRTSDGKYTYTWDTGDRLSSITKKGESEPFTSYTYDDDDRRL
                     SKTVDGVTTNYHYDGDSIDVLYETDGDGKVVRQYVYSDDNVRLAMKMNGKTLYYHYNA
                     HGDVIALTDEAGKIVAEYAYDAWGNVLKNTASTEEAKANPYGYAGYTYDKEIEQYYLM
                     ARYYEPEQGVFTAYDPDPGDEDDPQTMNGYNYANNNPVMMVDPDGNFPLAIPAVYWGV
                     SGAIAAAPFVGYGIGAAGTKIWNNTKKVNRGYKFLWNNRKQIARKVYKSTRIKWGHIK
                     NRHSPKSSIKKKGKFRNNRTLKRTTRATLRSGKARPGEKGRTILEKTFKERVGVNRDG
                     DPSYRVRVIRAPNGKVITSYPI"
     gene            complement(12368..12793)
                     /locus_tag="U0308_000911"
     CDS             complement(12368..12793)
                     /locus_tag="U0308_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315884.1"
                     /translation="MGYIRVIFDSFIILEKYHTRVGFDGFALVANEAIFKVQQDTQYL
                     KPYQNLNRPQEQIPELSEEGDTLLNFLEWTKKNNKLVEIMTVWDELIIGTIETIEANL
                     VMINTLAPEEFASDGKCFIECDNIVDICIDTARLKFITA"
     gene            complement(12989..13735)
                     /locus_tag="U0308_000912"
     CDS             complement(12989..13735)
                     /locus_tag="U0308_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2315885.1"
                     /translation="MTIKNKVIIITGASSGIGEATALLLAEKGAKVVLAARRVEKLEK
                     IVQTIKASSGEAIFAKTDVTKREDNKKLVELAIETYGKVDAIFLNAGIMPNSPLSALK
                     EDEWEQMVDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWA
                     VRDLMEVLRMESAQEGTNIRTATIYPAAINTELLETITDKETEQGMTSLYKQYGITPD
                     RIASIVAYAIDQPEDVNVNEFTVGPTSQPW"
     gene            complement(13749..14318)
                     /locus_tag="U0308_000913"
     CDS             complement(13749..14318)
                     /locus_tag="U0308_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar O-acetyltransferase"
                     /protein_id="HEM2315886.1"
                     /translation="MIEQDLQKRLVGQEILQGSDLLDEIHKVKQNNEQLIIELNTKYH
                     SKKEVIKYLSDITGKPVDPSVDVSLPFYSDFGKHITFGKNIFINLNVTFVDLGGITIE
                     DNVLIGPGARLVTVNHLVSPKKRRGLRVAPICVKKNAWIGANATILSGVTIGENAIVA
                     ADATVTRDVPANVIVAGSPAKQIRKIIEE"
     gene            14436..15311
                     /locus_tag="U0308_000914"
     CDS             14436..15311
                     /locus_tag="U0308_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2315887.1"
                     /translation="MELRVLNYFLTVAREKTISRAAEVLHLSQPTLSKQLKELEEELG
                     VTLFIRGNRSITLTEDGLYLANRGKEILSLVELTTSNLLQNETISGKIMIGAAETRGF
                     EFIGSVLHELREKHPDITFQLHSGNADDVLEKIEHGLLDFGLVINPVEKLQYEYLPLN
                     IEDTWGILVNTKHSLAKKAVVTPSDIEANPIVVSNQSFIDNQLASWLGEHFEQLNVIG
                     RYNLLYNASLLAKENIASILCIDGIINTENTNLKFIPFSPPLTAGISIVWKKNQTFSS
                     ASKEFLRLIQKTCSK"
     gene            complement(15334..17916)
                     /locus_tag="U0308_000915"
     CDS             complement(15334..17916)
                     /locus_tag="U0308_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HEM2315888.1"
                     /translation="MVKAHIVNHTHWDREWYFTSADALVLSEQLFTEVIDELKKHPEA
                     NFVLDGQLSILDDYVALYPEKLADIKQLIADKQLFIGPWFTQTDAFFAHGESILRNAM
                     IGIFDSKKYGDYMEIGYLPDTFGFNAQMPTLLEHAGFDNVIFWRGIHLGEHVASPYFK
                     WQGLGEEASIYAINMPQGYGTGMLLEPTSAYVDGRLDPAIDFIEKYSKTTEVLIPSGN
                     DQLNIISNFAEKLVEINKMGRHDYQLSTYQDFIQYVRELPDLEEYRGEFRSPVLARVH
                     KTIGSSRMNIKLKSASLEQKLLTRIEPLLVIAKASGISISERLLMHTWKKLLEGQAHD
                     SLAGCVSDPVAEDILHRMKEADELCDSIENTIVKKIADDLSLAANEIIVFNTDSHDFD
                     GCKEIQVVTEHKNIHFPAFPDATIVQEEFIPSRENVLEETPAGNRFIEEPGYYVLQVR
                     VKVELPGLGYRVIAFEENDRELDSMIASNDVAITNNFYKITFENGEIALEKPNGERIT
                     SFITLEDDVNAGDTYDYSPLAGDIAELFTFSEVKTEKSSEVERLILTGKSDFPLDRLT
                     KEGHGDLQIKLILEVKKGSELLDVKVEVDNQIKNHRLRLKVNTGVKTDYNIASLPFGY
                     IKRKPVVPANWRETYSEMPIDIEPLEQSVTLTNEAESCTIFTQGIKEYQQLDQYLALT
                     LLATTGQLGKPDLAYRPGRASGDTTKKGHVLIETEGAQLLGKHEFSLAIYLGDQAFDE
                     HKTAERTKAFNQANVSYQRQPFNHFLHRLDNKIQKTERKLGAKQTLGMLNLPKEYLVS
                     ACHPSYYSADKYIIRLENPTNTPQKLALSDMSFEYVNAIEEVVANDNNTIPAYGSVTL
                     RLEI"
     gene            complement(17932..19038)
                     /locus_tag="U0308_000916"
     CDS             complement(17932..19038)
                     /locus_tag="U0308_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HEM2315889.1"
                     /translation="MFRKIGSELKKHVLTGISYMIPLVIAGAVIMAIARVGGSFFGIT
                     DIWDAKYADSANSLISLLHSLDGFGGLALGMMFPVIAAFIGYSIADKLALAPGLVGGL
                     LARDIGAGFLGALAAGLIAGYTCLLIKKYVKLPKAAASIVPVFLVPVFGTLITVLIIN
                     YVVGIPFADLNTALENWLNGMSGSNQILMAAIIGAMVGFDLGGPVNKAAVTTAMALLT
                     SGIYAPNTAAQVAIIIPPLGLGLATLIAKRKYNTEMREAGKSSLIMGLVGISEGAIPF
                     AVESPLKVIPATVLGSAVGGALAVGLGAINQAPISGFYGWFTVENWPVYILAIAVGTL
                     IVAGMSVALRKASAGEEMAGSSYDDEIDEAEWEA"
     gene            complement(19051..19371)
                     /locus_tag="U0308_000917"
     CDS             complement(19051..19371)
                     /locus_tag="U0308_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIB"
                     /protein_id="HEM2315890.1"
                     /translation="MKRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGAT
                     GIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVVLEVPVSAPIKDAEKVINAALAL
                     IDEK"
     gene            complement(19368..19832)
                     /locus_tag="U0308_000918"
     CDS             complement(19368..19832)
                     /locus_tag="U0308_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2315891.1"
                     /translation="MEVKDILTKELVVFDLEATTKEAAIEEMAEMLDEHGILADKATY
                     VRAVLDREAHSTTGIGNNIAIPHGKSESVTKSAIVFARTKEMIEWESLDDEPVNMIFL
                     LAITDSDKTDGHLKILAEIATKLMDDDIVENLKNTRDEEEVIRILNGGVVEI"
     gene            complement(19832..21793)
                     /locus_tag="U0308_000919"
     CDS             complement(19832..21793)
                     /locus_tag="U0308_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2315892.1"
                     /translation="MKAVTKMIANREKNIIQFLMKTGQTRVGTIANHLGLSEKTVSNS
                     LKEIDVFLKDFDMTVVRKPKIGVYIEGDNKAFAEVSRFLDNQVSPIPSTKEERVIYIF
                     SKLLKADDYITIHQLADELYISRSTIEKNMVEVTKMLEKEGITLYKKPSKGMKLLISE
                     REKRALTSKFINNFWGNNWYLKQEGEKVLQAFDTIKADVTGIFPEEGLKEIIAIVQAF
                     SERHDFAFTDYAFQSIVIHLAIAVERIRAGEYIENVESDPMKDVFDSQRNNTEILVSM
                     LEDRLDIKIPAFEVGYIQLHLTAAYNQQHDELLVSVRPKEDDVAEFVSTCLAEGNYDK
                     SLLDDLTTHMKSAINRLKLGMHFKNPYLSKIKQNFPQAFEEALYFKAKFEQKYDVQVN
                     EDETAYIALHFEAYKERSRSFPDQIRVVLVCSTGLGSSRLLAARIKKYFPMITIEKIL
                     SVQALMETEVDVDLVISTIYLELEDIPSIVVSPMMSKADLQQVESQIERTRRKKKKRS
                     QPFVDLIEPKTIFAKLDVATMEDAITQIGDKLVNLGIAQSGIVESALKREALSFTSFE
                     EMATPHADPALINESHIAIATLKNPVKWGLVEVDKIFFIALTEQNGINLDAMYEQFYK
                     YIDNKKWLEKLTQLKSAAEIYEHLLKDGM"
     gene            21955..22812
                     /locus_tag="U0308_000920"
     CDS             21955..22812
                     /locus_tag="U0308_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GRP family sugar transporter"
                     /protein_id="HEM2315893.1"
                     /translation="MSIYLIALLPVLGWGFMPIIANLRKSTPEEQLLGTSISALLFAF
                     ILFWILSPEITVLSFIVSFVSGIFWSFGQLLQFKGIAASSVAKAMPISNGTQLVGATL
                     FAVLVFREWQTVTAVIIGVVAVILILIGVVMTGFQKRGNHITESVSFHVYGIVILSSF
                     FLTLYVVTNQLFDVTGFSIILPQAIGMLTCAIGINLAKKTAISRKNVTFNLMTGLSWS
                     IANLGMFLATAVLGVATSFSISQACVIVATIGGILIFKQKKSPLEWTFILSGILLIMV
                     GVVFLSLLK"
     gene            complement(22831..23643)
                     /locus_tag="U0308_000921"
     CDS             complement(22831..23643)
                     /locus_tag="U0308_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM2315894.1"
                     /translation="MIRAISVDMDGTFLDGNGEYDRARFEKIYVELMKRGIKFIVASG
                     NQYYQLKSFFPGKDEELFYVAENGAVIFHQGELRSVNRFEERLVQKILRTLIQEYQDL
                     QVILCGVKSAYLLKAADPDFKAFAKKYYFELQELDSFDVLPDDTFIKFALDVEVAKTG
                     QIVEDLNQTFAGEIRAVSSGHGSIDIIIPGVTKGSAIQQLLNEWQVAPDDLLAFGDAN
                     NDIEMLQLTSHSYAMQESSPEVLAAAKHVAPSNKEAGVLQVIEEYMKKSQRP"
     gene            23790..24344
                     /locus_tag="U0308_000922"
     CDS             23790..24344
                     /locus_tag="U0308_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1211 domain-containing protein"
                     /protein_id="HEM2315895.1"
                     /translation="MSKGRLEAFSDGVFAIIITIIVLGMTLPDVFTAASTQAFLWEIF
                     IFIEGGLIIGQFWYSHSRLFDQVTFISTSAVLFNILFLLVLSLIPLFTRAIMQHPDMT
                     APIIGFVMTILITSVIFQLLHHAVYGKDSGIDNWKFRISSFIFVIALGIISFFAPQIS
                     TILFIIFPIAGWIIQLTNRRQPPK"
     gene            24425..24724
                     /locus_tag="U0308_000923"
     CDS             24425..24724
                     /locus_tag="U0308_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage repressor protein"
                     /protein_id="HEM2315896.1"
                     /translation="MRSLDAVEILRRGETIERYKEGGNSMLPLIKSMQPVRLEPIGMR
                     ELKVNDIVFCKVRGSFFTHKISKIRGKQYQISNNHKHVNGWITRNSIYGIVTKIW"
     gene            complement(24777..25187)
                     /locus_tag="U0308_000924"
     CDS             complement(24777..25187)
                     /locus_tag="U0308_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-O-methyl transferase"
                     /protein_id="HEM2315897.1"
                     /translation="MKRYIINRGIMVAVVIIYMYPLLGIIKGEKIFGDIGTPIVMIIA
                     ALIGTLSSVFLSEEKTKREYEKEKLEKDERYINNRKTFSHYLLIVLALTIPIVLIVLN
                     LNGIEQISISSLTIIFLIFCFSYMIVLEIIRKKV"
     gene            complement(25189..25392)
                     /locus_tag="U0308_000925"
     CDS             complement(25189..25392)
                     /locus_tag="U0308_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2315898.1"
                     /translation="MKVRNKVKQLREERGIGQNELALALEVSRQTIHAIEKGKYNPSL
                     ELSLKMARYFRLTIEEIFQLEEN"
     gene            complement(25519..26919)
                     /gene="pdgA"
                     /locus_tag="U0308_000926"
     CDS             complement(25519..26919)
                     /gene="pdgA"
                     /locus_tag="U0308_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan N-acetylglucosamine deacetylase
                     PdgA"
                     /protein_id="HEM2315899.1"
                     /translation="MKIRWIRLSLVTVLIIAVVFVGVIGFQKYQFSKSRNKVIMQMDR
                     LMKDQDGGNFRRLDKKENGVEIISYIPKTTEKKDNEIIQKEIEKATDAEVKKLNRDKE
                     TQGIIFYTYQKHRMAEQAISYKAVQSEYVKEGRTKFVLKDKKDICKNIVTDAETGALL
                     TLGEVLIKSNQTKLNLKTAVEEELIKTGGFSLKDVGNLGEIKSLVKWNQTDFEITNSE
                     LILPVKIPGAPEPNKVKVKLADIASSVNKRYLPSSVKVPEVPKAKTNKRIALTFDDGP
                     SASVTPGVLDTLKRHNVKATFFVLGSSVIQNPGLVKRELEEGHQVGSHSWDHPQLTKQ
                     STQEVYNQILKTQKAVFDQTGYFPTTMRPPYGAVNKQVAEEIGLPIIQWSVDTEDWKN
                     KNAGIVTKKVLAGATDGAIVLMHDIHKTTAASLDATLTKLKNQGYEFVTIDELYGEKL
                     QIGKQYFDKTDSRMVK"
     gene            complement(27212..28021)
                     /locus_tag="U0308_000927"
     CDS             complement(27212..28021)
                     /locus_tag="U0308_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HEM2315900.1"
                     /translation="MLNYLSSLNPVLLALLAGIFTWACTAAGASLVFFFKNLNKKWGN
                     VMLGFAAGVMLAASFWSLLAPAIEMSKDLGKFSFVPALVGFLLGGIFLRVIDRIIPHL
                     HFGFPEQAKEGPKTSLRKSILLVLSITIHNIPEGAAVGVAFGAVITGDTETLITAIVL
                     ALGIGIQNFPEGAAVSIPLRGEGLSRGKSFWYGQLSAVVEPIFAVIGAVLVVFVTPIL
                     PFALAFAAGAMIFVIVEELIPESQVEGSTDLATAATMAGFAVMMVLDVALG"
     gene            complement(28048..28239)
                     /locus_tag="U0308_000928"
     CDS             complement(28048..28239)
                     /locus_tag="U0308_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315901.1"
                     /translation="MAKPIEEIGEEIGAKVEKVARKTGNVAGTAAKLSVYSSIWAVKT
                     GVNKTRAFAQGFKQGWSGK"
     gene            28582..29454
                     /locus_tag="U0308_000929"
     CDS             28582..29454
                     /locus_tag="U0308_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HEM2315902.1"
                     /translation="MTGLGTLLFLVGIGVLIFGLVSFRRKNWPRKKTQIIIISSILAI
                     IIGVGIIPTTDEEASTEEPTKQEEKTEKVDNTPILKAETTFTTDDEGTLVVEGKTNPG
                     AEVTLDFVAIPDAVTTADENGAFSLSVNQLDKAQDAVLSIVIDGQTKEQTLKLALTPA
                     YETKLTAKAEAERVAAEKAEAERVERERVAAEEKRAADAKIAAEKKAEEARVAAEKKA
                     AEEKRVAAERSKAAAAQPDTSNEQGQMVYITATGKRYHYDQNCRGLNNSNGETAVTVA
                     QAKAQGLTLCKFEQ"
     gene            29654..32257
                     /gene="ppsA"
                     /locus_tag="U0308_000930"
     CDS             29654..32257
                     /gene="ppsA"
                     /locus_tag="U0308_000930"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003729036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEM2315903.1"
                     /translation="MKPYVLKFQEIRPHSEALVGGKGMNLGACSYIEGVHVPAGFCLT
                     TEAYKRTLAENNEFTQLLQRLSSLKTSDMDAIREISETIRTLIQHTQIPSEIASYMDA
                     TLLDVGGYEMPFAVRSSATAEDLPHASFAGQHDTYLNIIGKDALLQHISMCWASLFTE
                     RAIIYRIQNQFDHRKVQLAVVIQQMISPEASGILFTADPITSNRKSLSIDASFGLGEA
                     LVSGLVSADSYTVRENTITNKIIATKKLAIYSLKEGGTETRILEKSQQTKQTLTDQQI
                     IQLAKLGRKIEAYFGKPQDIEWCLAEGAFYIVQSRPITTLYPIPEVNEPGNRVYISVA
                     HQQMMTDAMKPLGLSFYLMTTPATMYTAGGRLFVDITQSLSAKVSRDMMVNSLGQSDP
                     LIKDALLTVINKKGFLPPLPTEENPSQAPVSGKPPVRSIPDSSSVFELVRNSENSIKH
                     LKQSIETKNGSDLFDFIVEDLEELKRVLFNPTSIDAIMAGMDASAWLNEHIYQWLGEK
                     NVADKLSESAPNNITSQMGLELLDVADVIRPYPAVRAYLEQTKNPDFMNELATLEGGA
                     ETKKALEDYLQKYGMRCAGEIDLTKTRWIENPLTLIPLILSNIKNFDSSASMHKFAQG
                     EKEAFHKEQEILRRLQELPDGEQKAMETKEKIDILRHFIGYREYPKYGMINRYFIYKL
                     ALLRAGEQLVKDGILQEHEDIYFLYFEELREVVRTGQVDYELINARKRDFATFEKLTP
                     PRILTSDGEMINGEYKRENLPKDAILGLPVSSGTVEGRARVILEMEKADLEDGDILVT
                     AYTDPSWTPAFVSIKGLVTEVGGLMTHGAVIAREYGLPAVVGVENATTIIKDGQQIRI
                     NGTEGYIEILD"
     gene            complement(32305..>34222)
                     /locus_tag="U0308_000931"
     CDS             complement(32305..>34222)
                     /locus_tag="U0308_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="InlB B-repeat-containing protein"
                     /protein_id="HEM2315904.1"
                     /translation="NMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLA
                     SLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQ
                     ISDINAVKDLTKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTN
                     LTTLFLSQNHITDIRPLASLSKMDSADFANQVIKKPARNFSKTLSVPNNITSIDGTLV
                     TPKTISNNGTYDAPNVNWSSPSYLPEVRYTFKQDVAVGSTTSSYTGIIIQPLNEPVDY
                     NVTFNIDGNTSEVKTVTEEDLIPEPTNPTKQGYTFDGWYDAETGGTKWDFTTGQMPAN
                     DLMLYAHFSVNSYQVNFDIDGAVMNEAVVYDTLLNEPTAPTKQGYTFDGWYDAETGGN
                     KWDFKTMKMPANDVTLYAHFTVSSYQVNFDIDGAVTNEAIVYDALLNEPATPTKQGYT
                     FDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTINNYQANFDIDGAVTNETITYDTLL
                     NEPTAPTKQGFLFDGWYDAEVGGTKWDFNTMKMPANDINLYAHFSKETPLIPSPSDES
                     DSKPTNGSITINEPSATSMPAQNNNITVTAGENTPELTTAKLPKTGDNNPWQTLFAGI
                     LLSSSAFYIWRKKA"
BASE COUNT         9285 a         7247 c         5946 g        11744 t
ORIGIN      
        1 tcctttttca gcggaactat atttaaattc tacatacatc gttccttcca attggctttt
       61 tcttaaaaac aagtcattat aattattgtt tttgcattta tccctaccta ttctttccat
      121 aagtaattat cttccctcct cttgtataat atccaaaata tttcccattc ttaattttat
      181 atccttttcc aactttaaaa ttagctttag ttcttgattt tctatttttc cgtttgagtt
      241 tgacagcttc tttggtgtac tgcgacttat ttatattact tccctttttc accacatgtt
      301 tattatagtg ataatttagg cttgctctac tggaattaaa agttcccttt gaccactttc
      361 gttctctgtt ccatttttta gtttttatat aggctttctt tataaaacga taggctttct
      421 taccaccttt aaacttacct cctccaaccg caccttttgc tgcagcccat cctgcactct
      481 tccaactttt tgttttctta tacgctttat atccatcata agctgcaaat ccagcattaa
      541 ttgctagcca aacccaatgc ccatcaggat ccacatatct cactggatta ttattcgcat
      601 aattataccc attcatcgtc tgcgggtcgt cttcatcgcc tgggtctgga tcgtaagcgg
      661 taaacacccc ttgcttaggt tcgtaataac gcgccatcaa gtaatattgt tcaatttcct
      721 tgtcatacgt atatcccgca taaccatacg gattggcttt ggcttcttcc gtagaggcat
      781 tgtttttcag cacatttccc caagcatcat acgcatattc tgcgacaatt ttacctgctt
      841 catccgtgag tgcaattacg tcgccatgcg cattatagtg ataataaagg gttttgccgt
      901 tcatcttcat cgctaaacga acattatcat ccgaataaac atactgacga actacttttc
      961 catcaccatc agtttcatac agaacatcaa tactatcgcc atcataatga taattcgtcg
     1021 tcacaccatc gactgttttc gacaagcggc gattatcatc gtacgtatag gcttactctc
     1081 gccttttttc gtgatgctgc ttaaacgcat gatatgtatt atttacatct cttactttta
     1141 gaataagccc tccctataaa aatggagggc tcattttctg tttatttttc attaaaactt
     1201 gttctactct cacatctaaa agactaacat ctatcaatgt ttcagtgaat gcatattttt
     1261 taattggaat atatttccta atcaaggtct tttataccta ttcccagtta tcctatacct
     1321 aacttactgt cttaaaaaac gatattacac tttttcttgt ataaaactta attaccttta
     1381 tctttctttt tcagcttaga aaaaagcctt tctaaaatgc ctttttcctg tatttttcca
     1441 cttatataca tcgtaaccat ttccttaaaa taatctgaga aaagggagtc ataattaaag
     1501 tttgcttgca gataatttgc cagttgttct ctgttttcac tttcccattt cacaaattct
     1561 tttacactct ttcctccaga agcataataa gagtctttta aaaatacatc ttctggatta
     1621 gctaatgaag cttcgcgaag atacttcttt ccttttaacc gtaaatcatc gtaatcctct
     1681 tctcccataa aacattcagg attaagtgag aggcaatagc ccataatcca ctttacttct
     1741 ggaatatcaa gtagttcctg ctccccataa ctatacatat atcttaattt ttcatcttgt
     1801 tcttcataac tctcaatatc aaagttatca atttgtaagt accactttaa gaaaaacgct
     1861 cttacaaaga agtgagtatt cttcggatct gaaatccaag catcatagct gaatttcaaa
     1921 atttgttcaa gcttcccatc tacttctaac cgatctaatt cttcccattc tagatttatc
     1981 atagctctct tacctctttt ctatcataca tttttatttt ctttcaaccc acgcattacc
     2041 aattttaatt ttcccatctt ttctaacaaa ggttacaata attttccgct tattataaat
     2101 caaagttttc tttctagcac tttttttata actagattct ttacctgaac gcatagttct
     2161 cttaataagt gcttgtactt gtccccaact cccgtctgaa accgaattcc attgatgttc
     2221 tggttccgta atatgttttc ttttatccga gtcaaaagat ttcaattggc tatttgtttg
     2281 tttcgtttct tgtcgtttct tgggcttggc tttaaacccc ttccaccatt ttttcatgct
     2341 ctttgaaact ttttttgcgc cttttttcgc gtacttccaa gctgtttttc cgccttttgc
     2401 ggcaaactta aacaatactc ctgcccatag tccatctgga tctgctaaca tcactggatt
     2461 attactcgca taattatatc cattcatcgt ttgcggatcg tcttcatcgc ctgggtctgg
     2521 gtcaacagct gtaaatacgc cttgttctgg ttcgtaataa cgcgccatca aataatattg
     2581 ttcgatttcc ttgtcatacg tatatccttt ataaccatac gaattggctt tggcttcttc
     2641 tgtagaggca ttgtttttca gcacatttcc ccaagcatca tacgtatatt ccgcgacaat
     2701 tttacctgct tcatccgtga gcgcaattac gtcgtcatcc gcattgtaat gataatagag
     2761 cgactttccg ttcattttca tggctaatcg aattccgtca tccgaataaa catattgacg
     2821 gacgactttt ccatcattat tcgtctcata tagaacatta atgctatcgc catcataatg
     2881 ataattcgtc gtcacaccat cgacggtttt cgacaagtgg cggttatcat catcgtacgt
     2941 ataactcgta aacggcttgc tctcgccttt tttcgtaatg ctgcttaaac ggtcgccggt
     3001 atcccatata tacgtgtact tgccatcgct tggttaccgt ggttaatggt tacttcaccg
     3061 aacaaatttt catgttcact cttatctcac tgctaattaa atcacttata aaaatactca
     3121 tcattaataa tgacttaaat tgtttcatgt ttcttcttct gtttgcctaa acttctctcc
     3181 aaaacatctt ttttaatctt ttttatctaa atccatagtg attagttctt taaaacaatc
     3241 agaaaaaagc gaatcatagt taaaattttc ctctacataa agaagaaatt gttctctatt
     3301 tgctcttttc caatctaaat atcgttcatg agaatgtcct tcagtaccaa agtcataatc
     3361 taaagatttt aaataaatat catctggatt agctaaagcc aattcatgga gatatttatc
     3421 tccttttata cgtacctcct cataattgtc tccttgcttc ataaaatatt ctggattaag
     3481 tgaaatacaa taaccaataa tccactttac ctctgtcaca tcaagaagct ttttttctcc
     3541 atattcatac atattcatca attgcttttc ctgtgtttca taatcttcaa tatcaaaatc
     3601 atcaattatc aaataccatt ttatgaaaaa ggttcttaca aaataacggg tattcctctg
     3661 gtccaaattc catgcattat agctatagtc taatattttt tccaaatcac cctctacctc
     3721 taagcaatct aaatcttccc attgaagatt taacatgatt cattttcccc ctcgttagtt
     3781 ttctatttag ttttaaccca tgcatcacta attctaattt tcccttcaac tcgtttaaac
     3841 gtcactacaa tagtcctttt accatatttc atcgttttct gcctagcact tccataggct
     3901 gattccttac cattccgcat cgttcgattt ataagatttc tcacctgccc ccaactacca
     3961 tccgtaatcg aattccaatc atgttttttt ctcaatatat atttcgattt ttttctgtaa
     4021 tagaatttac agcatttgtt gattctttta cagatttctt cttagctgca gataatctaa
     4081 atcccttcca ccattttttc atgctctttg aaactttttt ttgcgccttt tttcgcgtac
     4141 ttccaagctg tttttccgcc ttttgcggca aacctaaaca atactcctgc ccatagtaca
     4201 tctggatctg ctaacatcac tggattatta ctcgcataat tatatccatt catcgtttgc
     4261 ggatcgtctt catcccctgg gtctgggtca acagctgtaa atgcgacttg ttctggttcg
     4321 taataccgcg ccatcaaata atattgttta atttccttgt catacgtata tcctttataa
     4381 ccatacgaat tggctttggc ttcttccgtg gaggcagtat ttttcagcac atttccccaa
     4441 gcatcatacg catattctgc gacaaccttg cctgcttcct ccgtgagcgc gattacgtcg
     4501 tcatccgcat tgtaatgata attcgtcgtc acgccatcaa tgattattta ttttatagta
     4561 tttaacgttc ctgatttgat tttcattttt aaaataagcc ctccctataa aaacggaggg
     4621 ctcattttca ggttattttt aatgctaatt cttctctata ggccttcttc aaagtttaga
     4681 aagctggaca atgttgaatt cattttcact ttctaaaact acttcactat atccggtact
     4741 tattgcatat gcctcatcat atactttttt atctataatg atttctttcg taatttccat
     4801 actttcatct actttataaa tatgattctg atatctagcg taaaagttat ctcccacact
     4861 caacaattcg tccacagtat aatttattac gactttattc tgaacttttt tcgaggttaa
     4921 atcatagtct aaagtaaagt catcatcatt ttcttcataa cacagtatcc gtatcctttt
     4981 attcttacag ctcattgatt gtacatcaat gagtgtttct aaaatgctgt catctaagag
     5041 cccagtaatt tctcctgtaa atatatctat tttaataagc cctaattgtg ctatgggtaa
     5101 attctcctca ctcccaaaca taccttcttc tgaataaata acataagctt catcatttaa
     5161 aacgaggaaa tccgccacac cttctcccaa tggatattta aaatgcttcc ctatacatga
     5221 gattaataaa taatcgtaaa caccatcatg acaaaaaata caaactttct catcagacaa
     5281 tttgacttcc ttaactttga aataccgatc agaaattatt tcatcgttta tttcacatga
     5341 aatttcttcc ccagaaaaaa gtttcaaaca gtttttttct atttggaaat taagtacttc
     5401 tcctccagtt tctttaaaag cgtaaataga ttgtgcttgt ttttttattt ttaacatagt
     5461 gtttacctcc tgcttaaatg ggatatgatg taattacttt accatttgga gctctgataa
     5521 ctcttactct atagctcggg tccccgtcac gattcacgcc taccctttct ttgaatgttt
     5581 tctctaaaat tgtccggcct ttctctcctg gtctagcttt cccacttctt aatgtagctc
     5641 ttgttgttct ttttagagtc ctattatttc tgaatttccc ctttttttta atcgatgact
     5701 taggagagtg cctattctta atatgtcccc acttaattct agttgactta tacacctttc
     5761 tagcaatctg tttacgatta ttccaaagga acttatatcc cctattcact tttttagtgt
     5821 tattccatat ctttgttcct gctgcaccta taccataacc aacaaatggc gcagctgcaa
     5881 tagctccact aactccccaa taaacagctg gaatggctaa tggaaagttc ccatccgggt
     5941 caaccatcat caccggatta ttattcgcat aattataccc gttcatcgtc tgcgggtcgt
     6001 cttcatcacc tgggtctggg tcgtaagcag taaacacacc ttgctctggt tcgtaataac
     6061 gcgccatcaa gtaatattgt tcgatttcct tgtcatacgt gtatcctgca taaccataag
     6121 gattcgcttt ggcttcttct gtagaggcag tgtttttcag cacatttccc caagcatcat
     6181 acgcatattc tgcgacaatc ttacctgctt catccgtgag tgcaatcacg tcgccatgcg
     6241 cattatagtg ataatagagg gttttaccat tcatcttcat cgctaaacga acattatcat
     6301 ccgaataaac atactgacga actacttttc catccccatc agtttcatac agaacatcaa
     6361 tactatcgcc gtcataatga taattcgtcg tcacaccatc gaccgttttt gatagacgac
     6421 gatcgtcatc atcgtacgta taactcgtaa acggctcgct ctcacctttt tttgtgatgc
     6481 tgcttaaacg gtcgccggta tcccatgtat acgtgtactt gccatcgctt gtacggttac
     6541 cattcgcgtc atacgtcaga gcctctccgt tccacgaaac cagttgatta ccatcattat
     6601 aacttgcggc aattgttttt gtctcgtttc cgctgattgc tacttgtgtg cggtttccga
     6661 agccatcgta ggtgtatgct tttacggtgc catctggtag tgtttcttta gttagttggt
     6721 tgactgcatc atattcgtag gttgtttttc cgtcttgttt gttgtcgatg cttgtgcgat
     6781 tgcttgctgc gtcataggtg tagttttcgt ctaaaatttg ggtgccgctt gcgctactaa
     6841 tagctgcgtt ggtgactttt tgggtgctat cgtaggtgta gttggctgcg gtgccgtttc
     6901 ctgctgtgta gacgttgatg tttccaaatt cgtcaaactc gaaataggcg tttttgcttc
     6961 catcgtttac gcgggtattg cggtctaagt cgttgtatgt gtagcttgtt tttgctgtgt
     7021 agtcgccgtg gttaatggct acttcgccga ctttgtctgt ttttcctttg ttatcttttg
     7081 ttggtttgtc tttgtatgtg tagcttacgt cgccacctcg ttcggctact ttggtgattc
     7141 ggttggcatc gtcgtaggtt ttgtcggtta cgatgctgtt gatttcgtcg gttacttttg
     7201 tttggttgcc gtttggatcg tattggaatt taaaggctag tttatcattc catttaatcc
     7261 cgtccatgcg gtcagcggaa tcgtatgtgc tttcggttac gcgaccattt ggcatgattg
     7321 cttttgtttt attaccggct gcatcgtatt catacttgat tgtgcgattt agtgcatcgg
     7381 taaatgcggt gattttgtta tccacgtcat attcatagat atttttttgc gttttgccgg
     7441 atgcagtgac atttttttcg gtggtgttgc cattgtcgtc gtacttatag gctacggatg
     7501 tgccgttcgc tagttttgtg tctataagcg cgttgtctgc atcataggtt aaagtttttt
     7561 tgttgccttt ttcgtctgtt tcggatgttt tattgccgta aatatcgtaa gtgaagctga
     7621 ttttgcggcc ttcttcgtca tagctggctg ttacatagtt gccggaagcg tcgtattcat
     7681 tttttgttaa tacttcgcct tctatgacac gtacgtcgtc aaaccatgct tttcctgtta
     7741 aaccattgcg gaacatggtg taaactttaa ctgatttgat tggtttggtt ggtttaatta
     7801 ctactgcgct tcggttccag tcgttggttc ctagcgggaa ttgtccttgt acggaagaag
     7861 ttgtgccatc ttgatagttg attgttcccc agacagaata atcgttcgac atcgttgcaa
     7921 ctgagccgtt tgatttggca tcttctgatt tggatagtgc ggaaatcgtt aatgctttgg
     7981 cttctttttg atttactggc acatcttggg caatgtgtgt ataggcttca cttgttgctt
     8041 ttcgttcaaa ataaacggca ctatcaccac tgtaaccttc attatctact acttttgctt
     8101 gtgtaagtgc ggtatttcct gaacgtgccc agccagtcgg aagcgttcca ttgtgctctt
     8161 caaaactgct gttgactacc gggttgtaac tggaagcaac actacctttt tcaaattgaa
     8221 cattgtcgta ccaaattgtt ccttttcctt tatgcggagc tggttgttcg ttgtccaaat
     8281 aaagcaagac ttggcgcgtg tttttagatg ttttaaaggt taattgacgt tttacccagc
     8341 cgccgttctt tttgatggat gtcgcacggt tggattgcca tacgccagca tcggtaatat
     8401 cttttgcatt cgcatcttgt aaacgtccaa tgagaattgc atcggcgttt gtcattccgg
     8461 atgttttaat ccaggcgcta aatgtatacg ttgtttctgg ttctacatca acgcgttgag
     8521 taacggatga atagcctttt acggtagaat ttgcttcact cgttagttta acggaaccgc
     8581 tgccgccgag tgttcctgga gctgactgag tgctatcgaa tgtcatgctt ccttttgcat
     8641 cagattgaat cagtgtccag ttggaaactc ctgctccttt ttcaaagccg ctgttttgaa
     8701 gtaagttacc tgctgaagaa agttcaccac tacctcgaat tggatttcca taggcgtcat
     8761 actgcgttac agaggatact tgggattctg tcgcaagtgt ttctgacacc gcatctgctc
     8821 cgtcataagt aaccgtcgtt ttgcgtcctt ctgtgtcagt tgcgctcgtt acatcgttat
     8881 ttccattgta ggtatatgat tctgtaccgt aagcatctgt cgcttgcgtg atattaccat
     8941 ctgcatcgta agaatatgtt tcttcttgtc ccttaggatt cacttctttt actaggttat
     9001 ttgattcata cgtgtaggtc gttgtgagtt tgagaccatc tgcatccaca atttctttct
     9061 ttggatttcc agcatcattg taggaataaa tggttttctt ctttttctcg tttgttaaag
     9121 ttgtttgttg ctcttccatg tcataagaaa gtgttgtttt tttgccgacc ggatcggtta
     9181 tttctgttaa tttctcttct tcataagcaa aggttgtttc gtatggtttt tcttctgtat
     9241 gttttggatc gtaaatcgat gttaataagc catctgtgta gccatagcag tatattttac
     9301 cgcgggcagt ggatgaactg attagctctt gtttgtcatt atacgtgtag ctgattttac
     9361 ggtcttctgg tccgacaagt tcttttacga gctcgccttc atacgctaaa gtcacggtac
     9421 gtccggaagc gtcgcgcatg tttgttagtt tgccgtcagt atattcgtaa gttaattcgt
     9481 tgccttttgt atctttttcg gattttaatc gtccatcagc taaaaagcgc gtttctgact
     9541 tatcttcttc tattttcaaa tagccatctg cgtttttagt aatctcggag taaatgcctg
     9601 gtggagcctc gtatttatca ccttttttag tgaaacgatg gactttcttg tccgattcca
     9661 cccatacgat atttccgttt tcttcttcaa taagtttctc ttcaagcgta cttgtccagc
     9721 ctttaccaaa aatgcctgtt gcgtcatctt gactgttaaa agtacggtcg acattgatgc
     9781 tcgggccgcg gccttctaag ttaaaatctg tttcatggaa taaaaagttt ccatttgtag
     9841 cgtttacttc gccgccacgt accggcacac ttgtccagta atctaccatt cctagctgtt
     9901 tatttactac ttctggaagg gatggtgtcg ctggttcgga ttgaatactt gtggcattat
     9961 ttcccgcttt ttggtacgca acaattcgga accagtagtt tgttcgttct ttataattac
    10021 cgccagaatt ggtataaact ggagaaggat cttttgctag ttcatcgcct tttccgtcat
    10081 gatgaagagc gaatttacct tctgcaattt cttctttggt tggccaaatc cctttatttt
    10141 gggtggtcca ctttgtttct gcgccaacat cgtattcttc gtaggctttc ccattgaaga
    10201 caagtacttt atagccatcc gccattgggc tcttttccca gttaagttcc acgtatcctg
    10261 tttctttatg agctaagtta gaatatgctt tcgcagcagg gggttgtggt ttttcgattg
    10321 gcatataggc aaatactaag tcggaattcg gactttctcc acccgggaaa acggcttgca
    10381 ctctgaataa atagcgcgtt aaattgcgca gtccaaaagt acttccagct tgaaacgcat
    10441 tttcatattg cgctcgcgga tcaagagcga attcggttcc tttgccatca tggtggaatt
    10501 cgaattctcc attagcgatt tcgtcatttg ttgggaaaat tttcttccct ttagtgctcc
    10561 aagtggttgc ggtgcttttt gtattaatat attcgtagtt atatccatta gaaataacga
    10621 tattataact cgttgcacca ggaacagcct tccaagataa atccatgtaa cctgttccag
    10681 ttcctactcc attcgaattc gttttaacag taggtttttc cggttgagca tacgtataat
    10741 ttacttctag ataaggatag tttttattat tttcacttgc tactaatttt ttccaatagt
    10801 tttgatcgat gttcgtagct agacggaaac cgttatttgg tcgcacgcca cttgcccatg
    10861 cttgaactgt tttagtgaca tctaaattcg cccactcacc tcggccgaca ttgacgcttc
    10921 caatccgtgt cgttgcagga gctgtattcc atgtcacttg ccatggggac cagttcgcat
    10981 tagattcata gtaccaaaga tcatttttaa ctgttgggga catatgccaa atgttataca
    11041 cttttagcgt tgctttagaa atcgtcgctt tatttaaagt agacgtgtcc atttttaaat
    11101 aggcggcatt atttcctgtt gaattgtccc atttaccaag ttttaacgtg taagcatttt
    11161 ggccagaatc ccaaagcttg ctcccgatat tggtttctgt tggtttagct gaattgatgt
    11221 tggcattata cacttcatct aaccggacag atggatcaat atagacagga tattcgcgcg
    11281 cggcatcatt tagccatgct gtatctactt ttaattgtag ctcatagact gttttggtta
    11341 gttgcttcac ttcaaaggaa acattctcgg ataacgctgc ttccccggtc tcagcgccga
    11401 cattggaatc tgtcataact ggtttcggaa gcgtatacat tgtttcgcca gatttatttt
    11461 tgaatagcac atcgccattc tttgccagct ctaaacctag ttttgtttct atttgataaa
    11521 catacgtatc tacttgatta ggttcatgta gcacgatgtc ttcttttact gattgtggaa
    11581 aagttaaatg acgtaaatct gttttaggaa atacattttc ataagtaact tcattttctt
    11641 tgtaggtcgc tggttggtct gtgactgctt gttcattttc gcctgtacgt gctcctttta
    11701 agcgaaaagt aacttctgcg ccagcttttg ttagtttctg gtatgcgccg tcttccattt
    11761 tgtctaagaa gcctagttct aatggggttt gttttggaac aatcatgtca gaatctgctt
    11821 ctttctccac attcgcatcg atgcgtttca tctcgccatc aacttccata ttgataggat
    11881 ccgcaaagat ttgttttgta aagctcccgt cgtgattatc aaaaaccact tcattttctg
    11941 ttcgttcgtc tttcacttct gttggtgctt gttctcccgc tttcttttct ggttctgcta
    12001 ccccagttga cgtctcctcc gccattggtg cataaccagg tattagtgaa agaaatagca
    12061 taatagctat taggctcact aagatttttt ttgcttttgc atgtattttc atgtgtcaag
    12121 ctctcccttt ttcaatgtaa tttcattcga tgccttgcta atttctcttt ttttaacttg
    12181 ccgctaacaa cttcactgcc ctctctttct aaaaaaggac cagttttaat tgagataaaa
    12241 ctggtccttt tcctaatatt acaaaattat tatagcatgt tttcattcca aaaagttatg
    12301 caaaatgtaa aatttttact ttttgtttga attattaatt ttattaatta taattagtgt
    12361 taaatagtta agcagtaata aatttcagtc gcgctgtatc aatacaaata tcaacaatat
    12421 tgtcgcattc tataaagcat ttcccatcag atgcaaattc ttctggtgca agggtattaa
    12481 tcattactaa atttgcttca atcgtttcta ttgtcccgat aattagctca tcccaaacag
    12541 tcattatttc cactaatttg ttgttctttt tcgtccattc cagaaaattc aatagtgtgt
    12601 cgccttcctc acttaattca ggtatttgtt cctgaggtcg gtttaaattt tgatacggct
    12661 tcagatattg agtatcttgt tgaactttaa aaatagcttc atttgctacg agtgcaaaac
    12721 catcaaatcc cactctagta tggtattttt ccaatataat gaacgaatca aaaataactc
    12781 tgatatatcc cacacgaaaa tcatttgttt gttgctcatc atcatatact tcataaaggc
    12841 acttttggtt tagttgttct aattgtttac gatttcattg gttcacctct tttttaagcg
    12901 ctttcaattt aagataccat gtttaatcct ctcctgcaat acaaaaaaag ccttgaacga
    12961 ataatcaatc cgttcaaggc ttttccattt accacggttg gctggttgga cctactgtga
    13021 attcatttac gttgacgtct tcgggttgat cgatagcata cgcaacaatg ctcgcgatac
    13081 gatcaggtgt gatgccgtat tgtttgtata agctcgtcat tccttgttcg gtttctttat
    13141 ccgtgattgt ttctagtaat tccgtattga tagctgctgg ataaatggtc gctgtgcgga
    13201 tattggttcc ttcttgcgct gactccatcc gtaatacttc cattaagtca cggactgccc
    13261 atttagtcgc gccatatact gcgccgccgg gatatgcttt taatcctgct acagaagaag
    13321 tggcgatgat atgtcctgat ttttgagcga tgaaagaagg caaaactgcg gcaattccat
    13381 tcagtacgcc tttaatattg atatcaacca tttgctccca ttcgtcttct tttaaagcag
    13441 ataatggcga attcggcatg attcccgcat ttaaaaagat tgcatctact tttccgtatg
    13501 tttcaatcgc taattctact aatttcttat tgtcttcgcg ttttgtcaca tccgttttgg
    13561 caaaaattgc ttcgcctgaa ctcgctttaa tcgtttgaac aattttttcc agcttttcta
    13621 cgcgacgagc agcaagaacc actttcgccc ctttttcagc taaaagtaag gctgttgctt
    13681 caccaattcc ggatgatgct ccggttataa taattacttt atttttgatt gtcatttgct
    13741 atctctcctt attcctcgat aattttacga atttgtttgg ctgggcttcc ggcgacgata
    13801 acgtttgctg ggacatctct tgtgacggta gcatccgcag caacgatagc attttcgccg
    13861 attgttacgc ctgataatat cgttgcgttt gcgccaatcc aggcgttttt cttcacacaa
    13921 attggggcta ctcttaagcc acgtcttttt ttcgggctaa ctaaatggtt gacggtcaca
    13981 agtcttgctc ctgggccaat taaaacatta tcttcaattg taatcccacc caaatccacg
    14041 aaagttacat ttaaattgat aaagatattt ttcccaaaag taatatgttt cccgaagtcg
    14101 ctataaaaag gaagtgagac atcgactgat ggatcgactg gttttccagt gatgtcactg
    14161 agatatttaa tcacttcttt ttttgagtgg tacttggtgt ttagttcgat gataagttgt
    14221 tcattgtttt gctttacttt gtgaatttca tctaacaaat ccgacccttg gagaatttct
    14281 tggccgacta gtcttttctg taaatcttgt tctatcatgc gctttccccc tcgaaaatct
    14341 tttactattt aattatagcg ggagaagtta taattgaata atacttataa aacatatcca
    14401 actattcatt ttagttatag gaaagggtga ttttaatgga gcttcgtgtg ttgaattatt
    14461 ttttaactgt tgctcgtgaa aaaacgatta gtagagctgc ggaagtgctt catctttctc
    14521 agccaacgct ttctaaacaa ttgaaggaac ttgaggaaga actaggggta actttattta
    14581 ttcgtggaaa tcggtccatt acgttaacag aggatgggct ttatttagct aatcgcggga
    14641 aagaaatttt atctttagtg gagttaacta cttcgaattt acttcaaaat gagacgatta
    14701 gcggaaaaat aatgattggt gctgctgaaa cgagaggatt tgaatttatc ggtagcgtgt
    14761 tacatgaact tagagagaag catcccgaca ttacttttca attgcatagc ggcaatgcgg
    14821 atgatgtttt agaaaaaatt gagcacggtt tactagattt tggtttggta attaatcctg
    14881 tggaaaaact acaatatgaa tatttaccac ttaatataga agatacttgg ggaattttag
    14941 tcaatacaaa acattcttta gcgaaaaaag cggttgtaac tcctagtgat attgaagcta
    15001 atccgattgt cgtttccaac caatctttca ttgataatca gctagctagt tggcttggag
    15061 agcattttga acaattgaat gtaattggta gatataattt actgtataat gcctctttgc
    15121 tcgctaagga gaacatcgca agtattcttt gtattgatgg tattatcaat acggaaaata
    15181 ctaacctgaa gtttatccct ttttcgccgc ctctaactgc tggaattagt attgtgtgga
    15241 agaagaatca aactttctcc agtgcttcga aggaattttt acgattaata caaaaaactt
    15301 gctcaaaata aatactttga gcaagttttc tttctatatt tctaatcgta acgtaacaga
    15361 gccatatgct ggaatcgtgt tgttgtcatt tgcaacaact tcttcgatag cattcacata
    15421 ctcaaacgac atatccgaga gtgccaactt ttgtggtgtg ttagttgggt tttccaggcg
    15481 gataatgtat ttatctgctg agtagtagga cgggtggcac gctgaaacta agtattcttt
    15541 cggcaaattc aacataccta acgtttgctt cgcgcctaat ttccgttctg ttttctggat
    15601 tttgttatcc aagcgatgta aaaagtggtt gaatggttga cgctggtaag acacgtttgc
    15661 ttggttgaac gcttttgttc gttcagcggt tttatgttcg tcgaaagctt ggtcgccaag
    15721 atagatggct aatgaaaatt catgtttacc aagtaactgc gcgccttctg tttctatgag
    15781 cacgtgacct tttttcgttg tgtcgcctga tgctcggcct ggccggtatg ctaaatcagg
    15841 ttttccgagt tgtccggttg ttgccagtag cgtcagtgct aaatattgat ccaattgttg
    15901 gtattctttg atgccctgtg tgaaaatggt acaactttct gcttcatttg ttagcgtcac
    15961 gctttgttca agtggttcga tgtcgattgg catttcgcta tatgtttctc gccaattcgc
    16021 tggtacaact ggttttctct tgatatatcc gaatggaagt gaagcgatgt tgtagtctgt
    16081 tttcacacct gtgtttactt ttaagcgtag acggtgattt ttaatttggt tatctacttc
    16141 aactttaaca tccagcagtt cgctaccttt tttcacctct aaaatgagtt tgatttgcag
    16201 gtcgccatgc ccttctttcg tcaaacgatc aagtgggaaa tcgctttttc ctgttaaaat
    16261 taaacgttcg acttcgcttg atttctccgt tttcacttcg gaaaaagtga ataattccgc
    16321 gatatctccg gctagtggtg aataatcata cgtatctccc gcattcacat catcttctag
    16381 tgtaataaaa gaagtgatgc gctcgccgtt tggtttttca agagcaattt cgccattttc
    16441 aaaagtgatt ttgtagaaat tattcgtgat tgccacatca ttggaagcaa tcatcgaatc
    16501 cagttcgcgg tcattctctt caaaagcaat cacgcggtaa ccaaggcctg gaagctccac
    16561 tttgacgcgc acttgaagca catagtagcc cggttcttca ataaatcggt ttccagctgg
    16621 cgtttcttct agcacatttt cgcgcgatgg aatgaactct tcttggacaa tcgttgcgtc
    16681 cggaaacgct gggaaatgga tgtttttatg ctcggttact acttgtattt ccttacatcc
    16741 gtcaaaatca tgtgaatccg tgttaaaaac gataatttcg ttcgccgcaa gtgacaaatc
    16801 atcggcaatt ttcttcacaa tcgtgttttc gatactatcg catagttcgt cggcttcttt
    16861 catccggtgc aaaatatctt cggcaactgg atcagaaacg cagcccgcca agctatcatg
    16921 cgcttgacct tctaaaagtt tcttccacgt atgcattagt aaacgctcgc taatagaaat
    16981 tccagatgct ttagcaataa caagaagtgg ctcaatacgt gttagcaatt tttgctcgag
    17041 tgacgcgctt tttagcttaa tattcattcg gctagatcca atggttttat gcactcgcgc
    17101 aagaaccgga cttctaaatt cgccgcgata ttcttctaag tcaggcagct ctctaacata
    17161 ttgaataaaa tcttgatagg tactaagttg ataatcatgg cgtcccatct tgttgatttc
    17221 cactaatttt tcggcaaagt tactaataat attcagctga tcattcccag atggaattaa
    17281 aacttcagtt gttttactgt acttttcaat gaaatcaatt gccgggtcga ggcgtccatc
    17341 cacatatgcc gaggttggtt caaggagcat ccctgtgccg taaccttgtg gcatattaat
    17401 cgcataaatc gacgcttctt ctccaagtcc ttgccattta aaatatggag acgcaacatg
    17461 ttcaccaaga tgaatcccac gccagaaaat cacattatca aagccagcat gttcaagtaa
    17521 agtcggcatt tgggcattaa aaccaaatgt atctggcaaa taaccaattt ccatatagtc
    17581 gccgtatttt ttactatcaa aaatcccaat catcgcattg cgcaaaatcg actcaccatg
    17641 cgcgaaaaag gcatctgttt gcgtaaacca cggtccaatg aaaagttgtt tatccgcaat
    17701 taattgctta atatccgcta atttttccgg gtacagtgcg acataatcat ctaaaatcga
    17761 cagttgccca tcaagtacaa agtttgcttc tgggtgcttt tttaattcgt caattacttc
    17821 tgtaaaaagt tgttcactta gaaccagtgc atcggccgag gtaaaatacc actctcggtc
    17881 ccaatgcgta tggttcacaa tatgtgcttt aaccatagtt acctccgttt tttaagcttc
    17941 ccattctgct tcgtcaattt cgtcatcgta gcttgaacca gccatttcct cgccagcact
    18001 tgctttacgt aaagcgactg acatacccgc aacgattagc gttccaacgg caatcgctaa
    18061 aatataaact ggccaatttt ctactgtgaa ccagccataa aaaccactga ttggcgcttg
    18121 gttaattgcg ccaagaccta cagctagtgc cccgccgaca gcagaaccaa gaaccgtagc
    18181 cggaataact ttaagcggag attctaccgc gaaaggaatt gccccttcac taatcccaac
    18241 aagtcccatg ataagagaag attttcctgc ctcacgcatt tcagtattat atttacgttt
    18301 tgcgattaag gttgctaaac caagaccaag tggtgggatg atgattgcta cttgtgctgc
    18361 tgtatttggt gcataaattc cacttgttaa aagtgccatc gccgttgtta cagctgcttt
    18421 atttacaggt ccgcctaagt caaaaccaac cattgctccg ataatagccg ccattagaat
    18481 ttgattcgat ccagacatac catttagcca attttcaagg gctgtattta agtcagcaaa
    18541 aggaatacca accacataat taataataag aacggtaata agtgtgccaa aaactggtac
    18601 taaaaatacc ggtacaatcg aagccgccgc ttttggcagt ttcacgtatt ttttaatcaa
    18661 tagacatgtg taaccagcga ttaaaccagc tgccagtgcc ccgaggaaac cagcgccaat
    18721 atcacgtgcc agtaaaccac caacaagacc aggtgctagt gctaatttgt ccgcaatcga
    18781 atacccgata aatgctgcaa taaccgggaa catcattcct agcgccaagc caccaaaacc
    18841 atctaaacta tgcagtagtg aaattaaact attcgcactg tctgcgtatt tcgcatccca
    18901 aatatctgta attccgaaaa acgaaccacc aacccgagca atcgccataa tcacggcgcc
    18961 tgcaataacg agcggaatca tatatgaaat acctgttaaa acgtgttttt tcagttcact
    19021 cccaattttt ctgaacatgg tagatcctcc ttatttttcg tcaattaacg caagtgctgc
    19081 gttgattact ttttctgcat ctttaatcgg tgcgcttact ggaacttcca gcacgacttt
    19141 accatcaaaa cgttctttgt tacgaacttt tgtatctact gcgaaaataa ctacttcgcc
    19201 gatatttaca tctttttcgg ttaattcatt ctcaattcct gtcgcgcctt gtgtttctac
    19261 tttgataaga ttgcccattt ttttcgcgcc ttttttaagt gcttgtgctg ccatatatgt
    19321 gtgcgccact cctgtcgcac atgcggttac tgcgataatt ttacgtttca tatctctact
    19381 acgcctccat ttaaaattcg aataacttct tcttcgtctc ttgtattttt taaattttcg
    19441 acaatatcat cgtccattag tttcgttgca atttctgcaa ggatttttaa gtgaccgtct
    19501 gttttgtcag aatcagtaat cgccagtaag aaaatcatat ttaccggttc gtcatccagt
    19561 gattcccact caatcatttc tttcgttctt gcaaaaacga tggccgattt tgtgacactt
    19621 tcactttttc cgtgtgggat agcaatgtta tttcctattc cagttgttga atgtgcttcg
    19681 cgatccaaaa ctgcccgaac ataagtcgct ttatccgcta aaataccatg ttcatctagc
    19741 atttctgcca tttcttcaat tgctgcttct tttgtcgtcg cctctaaatc aaagacgact
    19801 aattcttttg ttaaaatatc ttttacttcc attacatccc atcctttaac aaatgctcat
    19861 aaatttctgc ggcacttttt agttgtgtca gcttctcaag ccatttttta ttatcaatat
    19921 atttataaaa ctgttcatac atcgcgtcta aattaatgcc attttgttcg gtcagagcga
    19981 taaaaaagat tttatccacc tcgactaagc cccatttcac tggattttta agtgtggcaa
    20041 tagcgatgtg cgattcatta ataagtgcag gatctgcgtg tggtgtcgcc atttcttcaa
    20101 aagaagtgaa cgataacgct tctcttttta gcgcactttc aacaatccct gattgagcaa
    20161 taccaagatt cacaagctta tcaccaattt gcgtgattgc gtcttccatc gttgcaacat
    20221 ctagcttcgc aaaaatagtt ttcggttcaa tcaagtcaac aaatggttgg ctgcgtttct
    20281 ttttcttgcg tctcgttcgt tcgatttggc tttcaacttg ttgtaaatcg gctttactca
    20341 tcatcggact gacaacaata cttggaatat cttccagttc gagataaatc gtgctgatga
    20401 ctaaatccac atcgacttct gtttccatta acgcctgaac ggataatatt ttttcaatcg
    20461 taatcattgg aaaatatttt ttaattctcg ccgcaagtaa tcttgatgaa ccaagcccgg
    20521 tactgcatac aagtacaact cgaatttggt cggggaaaga acgacttctt tctttgtatg
    20581 cctcaaaatg tagcgcgata tacgccgtct catcttcgtt cacttgcaca tcgtactttt
    20641 gttcaaattt tgctttaaaa tatagcgctt cttcaaacgc ttggggaaag ttttgcttaa
    20701 ttttgctaag gtacggattt ttaaaatgca taccaagttt taaccggtta atggcggatt
    20761 tcatgtgtgt cgtcaagtca tccagtaagc ttttatcgta attcccttcc gctaaacacg
    20821 tgctgacaaa ttctgccaca tcgtcttctt ttggtcgaac gcttacaagt aactcatcat
    20881 gctgttggtt atatgctgct gttaaatgca actgaatata gccgacttca aatgctggaa
    20941 ttttaatatc caaacggtct tctagcatgc taacgaggat ttccgtattg tttcgctgcg
    21001 aatcaaatac atctttcatt ggatcgctct caacattttc gatatactct cctgctcgaa
    21061 tacgctctac cgcaatcgca aggtgaatga caatcgattg aaacgcataa tcagtaaaag
    21121 caaaatcatg tcgctcacta aatgcttgaa caatcgcaat gatttctttc aagccctctt
    21181 ctggaaaaat tccggtgaca tcggctttaa tcgtgtcaaa agcttggagg accttttcgc
    21241 cttcttgctt taaataccaa ttattgcccc aaaaattatt aataaatttc gatgttaagg
    21301 cgcgcttttc tcgttcacta ataaggagtt tcatgccctt actaggtttc ttatacaaag
    21361 taataccttc tttttccagc attttcgtaa cttcaaccat atttttctca atcgtgctcc
    21421 ggctaatgta aagttcgtct gcaagctgat gaatcgtgat atagtcgtct gctttaagca
    21481 atttactgaa aatgtagata acccgctctt ctttcgttga tgggattggg ctgacttggt
    21541 tatctagaaa tcggctaact tcggcaaaag ccttgttatc accctcaata tacacaccga
    21601 tttttggttt acggaccact gtcatatcaa aatcctttag aaaaacatcg atttccttca
    21661 gtgaatttga aacagttttt tctgaaagtc cgagatgatt cgcgatagtt ccaacacgtg
    21721 tttgacctgt cttcattaga aactgaatga tatttttttc gcgatttgca atcattttcg
    21781 ttaccgcttt catttttaat tttcctttcc ctacgcttat tctattacaa agactcatcc
    21841 ccagaaaact acgaaaatta ccgcattgaa taccgtaatt ttgggatatt gctgttcatt
    21901 ttggagaatg gtagatttaa atagcaccac taacctagaa aggaagctta ttttatgtct
    21961 atttatctta ttgcgttact ccctgttctt gggtggggat ttatgccgat aattgcgaac
    22021 ttacgaaaaa gcacccccga ggaacaacta ctggggactt cgattagcgc gctattattt
    22081 gctttcattt tgttctggat tttatcacca gaaataacgg ttctttcttt tatagtgagt
    22141 tttgtttcgg gtatcttttg gagttttggg caattactac agtttaaagg gattgcggct
    22201 tctagtgtcg cgaaggcaat gccgatttca aacggtacac aactcgttgg cgcaacgctt
    22261 tttgccgttc ttgttttccg ggaatggcaa acggttacgg ctgttattat cggagttgtt
    22321 gcagtaattt taatcttgat tggggtggta atgaccgggt ttcaaaaacg cgggaatcat
    22381 atcacggagt cggtttcatt tcatgtctac ggtatcgtta ttctatcttc gttcttttta
    22441 acgctttacg tagtgacaaa ccagcttttt gatgtcactg gcttttctat cattttacca
    22501 caagcaatcg gtatgctgac atgcgccatt ggtattaact tagcgaaaaa gactgctatt
    22561 tcccgaaaaa atgttacatt caacttaatg accggattat cgtggtccat cgccaattta
    22621 ggcatgttct tagcgactgc tgtacttggt gtcgcaacga gcttctcgat ttcacaagct
    22681 tgcgttatcg tcgcaacaat cggcggtatc ctcattttca aacagaaaaa aagcccgcta
    22741 gaatggactt ttatcctttc tggcatactg ttaataatgg tgggcgtcgt gttccttagt
    22801 ttattgaaat aaaaaaagcc aaagaccacc tcaaggtctt tggctttttt tcatatactc
    22861 ttctataact tgtaacacgc ccgcttcttt attagaagga gccacatgtt tcgcagcagc
    22921 aagaacttcc ggactgcttt cttgcattgc gtaactatgc gacgttaatt gcaacatttc
    22981 gatatcatta ttcgcatcac caaaagcgag taaatcatct ggcgccactt gccattcatt
    23041 caatagttgc tgaatcgcgc tccctttcgt cacacccgga attataatat caatacttcc
    23101 atgcccgctc gacacagcgc gaatttcacc ggcaaacgtt tgattcaaat cttccacaat
    23161 ttgccctgtc ttagccactt ccacatcaag cgcgaactta ataaacgtat catccggaag
    23221 tacatcgaac gaatccaact cttgcaactc aaaataatac tttttcgcaa atgctttaaa
    23281 atcgggatcg gcggctttta ataaatacgc actcttcacc ccacaaagaa tcacttgcaa
    23341 atcttgatat tcttgaatca acgtccgcaa aatcttttga actaatcttt cctcaaaacg
    23401 attcacactc cgaagttccc cttgatgaaa aataaccgcc ccattttcag caacataaaa
    23461 aagctcctca tccttccctg gaaaaaaaga tttaagctga taatattgat tcccactcgc
    23521 aacaataaat ttaatcccac gcttcattaa ttcaacataa atcttctcaa atctagcacg
    23581 atcatattca ccatttccat ctaaaaaagt cccgtccata tctacagaaa tcgctctaat
    23641 catccgttta agctcctttt aaagttaatt ttattctatt ataccaaatt ttttcgcgcc
    23701 acattgctac agcttgttta attataaaat atgctatact aaactagccc atatcataaa
    23761 taacaagaca cgaaaggagg gcccaaacct tgtcaaaagg aagattagaa gcatttagtg
    23821 atggtgtttt tgcaattata attacaatca ttgttttagg aatgacctta ccagacgtat
    23881 ttaccgcggc tagcacacag gctttcttat gggaaatttt tatatttatc gaaggcggat
    23941 taattatcgg acaattttgg tattcacata gcaggctgtt tgatcaagtc acattcattt
    24001 ccacatctgc cgtcttattt aatattttat ttttattagt tttgtcactt atcccattat
    24061 ttacaagagc aatcatgcaa catccagata tgaccgcacc gattattgga tttgttatga
    24121 ctattttgat tacttcggtg atattccaat tattgcatca cgctgtatat ggaaaagatt
    24181 caggtatcga caattggaag tttcgaatct ctagtttcat atttgttatt gcacttggta
    24241 ttatcagttt cttcgctcca caaatatcca ccattttatt tattattttc ccaatcgctg
    24301 gttggattat tcaactcaca aaccgccgtc agcctccaaa ataaaaaaag tcagcgaaaa
    24361 atttcgttga cttcgcttta ctattttgtt attctggcac taacaacaag aaaggagcat
    24421 aattatgaga agcctggatg cagtagaaat actcagacgt ggcgaaacca ttgagcgtta
    24481 taaagaaggc ggaaattcga tgttaccttt gattaaatcg atgcaacctg ttcgtttaga
    24541 accgattggc atgagagaac tcaaagtcaa cgatatcgta ttttgcaaag ttcgcggtag
    24601 tttttttaca cataaaatca gtaaaatccg cggtaaacaa tatcaaattt ctaataatca
    24661 caaacacgtg aatggttgga ttacacgtaa tagtatttat ggcattgtca ccaaaatttg
    24721 gtaaatgcta ggtaacatgc aacgaacaag ttggatgttt tttattttgc ctaaaatcat
    24781 actttttttc ggataatttc tagaacaatc atatacgaaa aacagaagat aagaaaaata
    24841 atcgtcagac tcgaaatgga gatttgttca atcccattta aattaagaac aattaacaca
    24901 attggtatcg tcaaagctaa aacaatcagc aaataatggg agaatgtttt gcgattgttg
    24961 atatatcttt catctttttc tagtttttct ttctcatatt ctcgcttcgt tttttcttca
    25021 gataagaata cagaactcag tgtaccaatt aaagccgcaa taatcataac aattggtgta
    25081 ccgatatctc caaatatttt ttccccttta attattccta aaagtggata catatatata
    25141 ataactaccg caaccataat acctcgatta ataatgtatc gtttcatgct aattctcctc
    25201 cagttgaaaa atctcttcta ttgttaaacg aaaatagcgt gccatcttca aacttagctc
    25261 taaactagga ttatatttac ctttttcaat agcatggatt gtttgtcttg aaacttctaa
    25321 tgctaaagct aattcatttt gtccgattcc tctttcttcc cgcagctgtt tcactttatt
    25381 acggactttc aattaaccac caccaaataa gaagtattta cagttattat aaaataaata
    25441 cagcttcacg taaagaaaac tttacatttc gtataaaaaa agtagctaaa atgattcatt
    25501 catcttagct actgattttt atttcaccat tcttgaatct gttttatcga aatattgctt
    25561 cccaatttgc aatttctcgc cataaagttc atcaatagta acaaactcat atccttgatt
    25621 ctttaattta gtcaatgtag cgtcaaggct cgcagcagtg gttttatgaa tatcatgcat
    25681 tagtacaatc gctccgtccg ttgcaccagc aaggactttt ttcgttacta taccagcatt
    25741 tttgtttttc caatcttctg tatcaacaga ccactgaatt attggaagac caatctcttc
    25801 agccacctgt ttgtttactg caccatatgg agggcgcatt gtagttggaa aatatccagt
    25861 ttgatcaaat actgcttttt gcgtttttaa aatttggttg tacacttctt gtgtcgattg
    25921 tttagttaat tgcgggtgat cccatgagtg gctgccaact tggtgccctt cctctaattc
    25981 acgttttact aaacccggat tttgtatgac actagagcca agtacaaaga atgtcgcttt
    26041 tacattgtgg cgtttcaatg tatcaagtac gcctggtgtt accgaggcac ttggaccatc
    26101 atcaaaagta agcgcaattc gcttgttggt ttttgctttt ggcacttctg gaactttcac
    26161 actgcttggt aagtagcgtt tattcacaga actagcaata tcagcaagtt ttacttttac
    26221 tttattcggt tccggtgcac ctggtatttt tactggcaaa attagttcag agttcgtaat
    26281 ttcgaaatct gtttgattcc atttcactaa actcttaatt tccccaagat tcccaacatc
    26341 ttttaaagaa aaaccccctg ttttaatcag ttcttcttca acagctgttt ttaaatttaa
    26401 tttagtttga ttacttttta ttaatacttc cccaagtgtt aacaaagcac ctgtttctgc
    26461 gtcggttact atgtttttgc aaatatcttt tttatctttg agtacaaatt tagttctacc
    26521 ttcttttacg tactctgatt gaacagcttt ataagatatt gcttgctcgg ccattctatg
    26581 cttttggtaa gtgtaaaaaa taatcccttg agtttcttta tctctattta actttttaac
    26641 ctctgcatct gtggcctttt caatttcttt ttggataatt tcgttgtctt ttttctcagt
    26701 tgttttagga atgtaagaaa tgatttccac tccattttct ttcttatcca agcggcggaa
    26761 atttcctcca tcttggtctt tcattagtct gtccatctgc attattactt tgttgcgcga
    26821 ctttgaaaat tggtattttt ggaaacctat tacaccaaca aaaaccacgg caataatgag
    26881 aacggtaact agtgaaagtc taatccacct aattttcaca ttatgcacct caccttagaa
    26941 aaaccttccc cagcttttct tataaaacaa ttatacatga aaaaaagcaa ctttctagct
    27001 tttgtactaa aataggaaaa aaggaccaac aattctataa caattgtcaa aaaaaagaca
    27061 cggataaagt gggagctttt accgtgtccg atttatagtt acaggattac ccctgaaaac
    27121 taacatattg tgaagtattt cactattaat tttaccgtaa aaaaacgcat tccgcaaata
    27181 ttaaatgtcg ttttttgtcc agtttattat tttatcctaa cgcaacatct aaaaccatca
    27241 ttactgcaaa tcccgccatc gttgcagcag ttgctaaatc ggtcgaacct tctacttgag
    27301 attcaggaat taattcctct acaataacaa aaatcattgc acctgctgca aaggccagcg
    27361 caaacggcaa aataggtgta acaaaaacaa ccaatacagc accaattaca gcgaaaattg
    27421 gttcaactac cgctgaaagt tggccatacc agaaactttt ccctctcgag agcccttctc
    27481 cgcgcaaagg aatggatact gccgctccct ctggaaagtt ttgaatacca ataccaagcg
    27541 ccaaaactat tgcagtaata agcgtctccg tgtctccagt tatcactgct ccgaaagcta
    27601 ccccaacagc tgccccttct ggaatattat gaatagtaat ggaaagaacc agtaagatac
    27661 tttttcgaag agaagttttt ggtccttcct tcgcttgctc tggaaacccg aaatgtaaat
    27721 gtggaataat acggtcaata acacgtaaaa atattccccc aagcaaaaag ccaactagag
    27781 ctggtacgaa ggaaaacttc cctaaatctt tactcatttc gattgcaggg gcaagaagcg
    27841 accagaagct tgctgcgagc ataacgcctg cagcaaatcc tagcataaca ttgccccatt
    27901 ttttatttag atttttaaag aaaaatacga gtgaagctcc tgctgcggta caagcccatg
    27961 taaaaatacc ggcaagaagt gctaacagta ccggatttag tgacgataag taatttaaca
    28021 attcatgctc tcccttttcc tatgctttta tttaccagac cagccttgtt taaagccttg
    28081 agcaaatgca cgagtcttat ttacgcctgt tttcacagcc caaatggaac tataaacaga
    28141 tagtttagct gccgttccag caacatttcc agttttccgt gcaactttct ctacctttgc
    28201 tccgatttct tcaccaattt cttctatcgg tttcgccatt tctagcacct ccaaagcact
    28261 tgtctttcct tcatcataaa gcaatcaatc ggattattca agctgcttcc tctttatcct
    28321 tttcactaat acgcttcctt tcgctatgat gaatttctag ctaattcatc taacctcgac
    28381 attctgatta atctccattt acttagacaa ctactgtctt tttagcaaaa tatgtaattt
    28441 ttttatcatt tttttgattt tctgaacatt ttcattgaat ttctttgtaa aaagtacaaa
    28501 aaacgactga tttaacttgt gcattaactc acattatgca tataataatt ttgttagaca
    28561 aaaagggaga ggaagatgta tatgacggga ttaggaactt tattgtttct agtaggtatt
    28621 ggtgtattga tttttggact ggtgagcttt agaaggaaaa attggcctcg taaaaaaaca
    28681 caaatcatta ttattagttc tattttagct attattattg gtgttggaat tattccgacc
    28741 acagacgagg aagcctcaac tgaagaacca accaaacaag aagaaaaaac ggagaaagtt
    28801 gataataccc caattttaaa agcagaaacg acttttacaa cagatgatga aggtaccttg
    28861 gtcgtcgaag ggaaaacaaa tccaggggca gaagtaacgc ttgatttcgt tgcaattcct
    28921 gacgccgtga ctacagctga tgagaacggc gctttcagtc tttctgtaaa tcaactggat
    28981 aaagcacaag atgccgttct ttctattgtc attgatggcc aaacgaaaga acaaacgctt
    29041 aaactagcac taacccctgc ttacgaaaca aaacttactg ctaaagcgga agcagagcga
    29101 gtagccgcgg aaaaagcgga agcagaacga gtagaacgcg aacgtgtagc agcggaagaa
    29161 aaacgcgcag ctgatgcaaa aattgcggct gaaaagaaag ccgaagaagc tagagtggca
    29221 gccgagaaaa aagctgcgga agaaaaacgg gttgcagcag aacgttcaaa agctgcagct
    29281 gcacaaccgg acacgagtaa cgaacaagga caaatggttt atatcactgc tactggcaaa
    29341 agatatcatt atgatcaaaa ttgtcgcggc ttaaataact ctaatggcga aactgctgtg
    29401 acagttgctc aagcaaaggc acaaggctta actttatgta aatttgaaca ataaaaaaaa
    29461 agcaaaattt cttatcatga gaaattttgc ttttctattt gtttttaatt gaatttaggc
    29521 tagattcatg gtaaatttag atagataata tcggtaaaat atactaatgt aaagcaatcc
    29581 ctactttaat tatacaacaa gaggttcttt acagtcaagt attatttttc gaaaaaaatt
    29641 gggggataaa tatatgaaac catatgtact caagtttcaa gaaatacgac cgcattcaga
    29701 agcacttgtc ggtggtaaag gaatgaattt aggtgcttgc tcttatatcg aaggagtaca
    29761 tgttcccgca ggtttttgcc tgacaacaga agcttacaag cgaaccttag cggaaaacaa
    29821 tgaatttacg caactgctcc aacgcctttc ttccctaaaa acaagtgaca tggatgctat
    29881 tagagaaatc agcgaaacga ttcgaacgct tattcaacat acacaaatcc cctctgaaat
    29941 agcgagttat atggatgcta cgcttttaga tgtgggtggg tatgagatgc ctttcgccgt
    30001 acgttctagc gccactgccg aagaccttcc ccacgcttcc ttcgctgggc aacatgatac
    30061 gtatttaaat attattggta aagatgcctt attacaacat atcagtatgt gctgggcttc
    30121 tttgtttacc gaacgcgcga ttatttatcg cattcaaaat cagttcgatc atcgtaaagt
    30181 ccaacttgcc gtcgttattc aacaaatgat ttcccccgaa gcatccggaa tcctatttac
    30241 ggctgatcca attacatcga atcgcaaatc cctctctatc gatgccagtt tcgggctagg
    30301 tgaagcgctt gtttccggtt tagtttctgc tgactcatac acagtccgag aaaatactat
    30361 tacgaacaaa ataatcgcta ctaaaaaact cgccatttac agtttaaaag aaggtggaac
    30421 ggagactcgc atacttgaaa aatcacaaca aaccaagcaa acattaactg accaacaaat
    30481 aatacaactt gcgaaacttg gtagaaaaat cgaagcctat tttgggaaac cacaagatat
    30541 tgaatggtgt ttagcggaag gtgcttttta cattgttcag agtcgaccta tcacgacttt
    30601 atatccaatt ccagaagtaa acgaacccgg caatcgtgtt tatatttctg ttgcacatca
    30661 gcaaatgatg actgacgcga tgaaaccact gggactttcc ttttatttaa tgacgactcc
    30721 cgccacgatg tatacagcag gagggcggtt gtttgtcgat attactcaga gcctgtcagc
    30781 caaagtttct cgcgatatga tggtcaattc actcggtcaa tcagacccac ttattaaaga
    30841 tgccttgctc actgtaatta acaaaaaagg attcctgcct ccactaccaa ccgaggaaaa
    30901 tccaagtcag gcacccgtgt ctggaaaacc acccgtgcgt agcattcctg attcatctag
    30961 cgtttttgaa ttagttcgaa acagcgaaaa ctctataaag cacttgaagc aatccattga
    31021 aacgaaaaac ggatctgatt tgtttgattt tatcgtagag gatttggaag aattaaagcg
    31081 agttttattt aatcctacta gcattgatgc cattatggca ggtatggacg cttcagcttg
    31141 gttaaatgaa catatctacc agtggctcgg agaaaaaaat gtcgccgata aactgtcaga
    31201 atcagcccca aacaatatta cttcacaaat gggacttgaa ttattagatg tagctgacgt
    31261 cattcgcccc taccctgctg tcagagccta tttagaacaa acgaaaaacc ctgatttcat
    31321 gaatgaacta gctactttag aaggtggtgc agaaaccaaa aaagcgctag aagattacct
    31381 tcaaaaatac gggatgcgct gtgcgggtga aattgactta accaaaactc gttggattga
    31441 aaacccgcta acgcttattc cgctgatttt aagtaacatc aaaaatttcg actccagcgc
    31501 gagtatgcac aaatttgctc agggagaaaa agaagctttc cataaagaac aagaaatcct
    31561 aagacgtttg caagagcttc cggacgggga acaaaaagcg atggaaacaa aagaaaaaat
    31621 cgatatttta cgtcatttca tcggctatcg tgagtatcct aaatacggga tgattaatcg
    31681 ctactttatt tacaaactgg ctttacttcg agctggcgaa caacttgtaa aagatggcat
    31741 tctgcaagag catgaagata tttattttct ttactttgag gaactgcgcg aagtcgtgcg
    31801 tactggtcaa gttgattacg aacttattaa cgctcgaaaa cgtgatttcg ccacttttga
    31861 aaaattaacg ccaccacgca tccttacttc tgatggagaa atgattaacg gcgaatacaa
    31921 acgcgaaaat ctccctaaag acgccattct tggacttcca gtttcatcag ggacagttga
    31981 aggtcgcgct cgcgtcattt tagaaatgga aaaagcggat ttagaagatg gcgatattct
    32041 tgttacggct tatactgacc ctagttggac tcccgcattt gtatctatta aagggcttgt
    32101 gaccgaggtt ggcgggctta tgacgcacgg agcagtgatt gcgcgcgaat acggccttcc
    32161 cgctgtcgtg ggtgtcgaaa atgcaactac cattataaaa gatggccagc aaattcgcat
    32221 caatgggaca gaaggctata ttgagattct tgattaaacc aaaaacccag taatctccat
    32281 tttaggaaat actgggtttt ttaattatgc tttttttctc caaatataaa acgcggatga
    32341 tgaaagtaat atcccggcga atagtgtttg ccacgggtta ttatctccag ttttcggaag
    32401 tttagctgtt gttagttctg gagtattttc ccctgctgtt actgtgatgt tattattttg
    32461 ggctggcata ctagttgcac tcggttcatt tatagtgatt gatccattgg taggtttcga
    32521 gtctgattcg tcagatgggc taggaataag tggcgtttct ttactgaaat gtgcgtacaa
    32581 attaatatcg ttcgcaggca ttttcatcgt gttaaaatcc cattttgttc cgcctacttc
    32641 tgcgtcatac cacccatcga aaaggaaacc ttgtttggtt ggagcagtcg gttcattaag
    32701 taaggtatca tatgttatcg tttcattcgt taccgcacca tctatatcaa aattagcttg
    32761 atagttgttg atggtaaaat gcgcatataa agtgacatca tttgcgggca ttttcattgt
    32821 tttgaaatcc cacttattac cgcctgtttc tgcgtcatac cagccatcaa atgtataacc
    32881 ttgtttagtt ggagtcgccg gttcattgag taaggcatcg tatactattg cttcattcgt
    32941 taccgcacca tctatatcaa aattcacttg gtaactgctg acagtaaaat gtgcatataa
    33001 agtaacatca tttgcgggca ttttcatcgt tttgaaatcc cacttattac cgcctgtttc
    33061 tgcgtcatac caaccatcga atgtataacc ttgtttggtt ggagcggtcg gttcattgag
    33121 caaagtatcg tatactaccg cttcattcat tactgcgcca tctatatcaa aattcacttg
    33181 ataactattt acggaaaaat gggcatatag catgagatca tttgcaggca tttgcccagt
    33241 tgtaaagtcc cattttgttc cacctgtttc ggcgtcgtac caaccatcaa atgtataacc
    33301 ttgtttggtc gggttcgtag gttctggaat tagatcttct tctgttacag tttttacttc
    33361 gcttgtattg ccgtctatat taaatgtgac attgtagtct actggctcat ttagcggttg
    33421 aattatgata ccagtataac tacttgtggt tgatcccacc gccacatctt gcttgaatgt
    33481 atatcttact tctggaagat agctcggcga agaccaattc acgtttggcg cgtcgtaggt
    33541 tccattattg ctaattgtct taggagtaac tagtgttcca tctatgctag ttatattatt
    33601 cggaacagat aatgtcttcg aaaaattacg tgctggtttt tttatcacct gatttgcaaa
    33661 gtcagcggaa tccattttac ttaaacttgc taatggtctt atgtctgtaa tatgattttg
    33721 cgataaaaat aaagtagtta aattagttaa tccaccaatc acttccatat cttcattccc
    33781 aagttgatta ttattcaaga ataaagaatt caattgggaa agattattta gaacagatat
    33841 atcactaatt tggttactac caacattcaa catttttaat ttagttaaat ctttaaccgc
    33901 attaatatcg ctaatttgat tggtaccgat ttctagccaa gttaattgtg atagattagc
    33961 taatgggctt aaatcagtaa ttttattatt tcctatcttt aaagaattta gccttgtcat
    34021 attagctaca ggagtaatat cagtaatttg attcacatat gctgtaaaat aatgtaaact
    34081 tgtcaaacta gctagcggac ttatatcttc aatttgatta taattcaaac ttaaactata
    34141 taagtcggtt aaattggcta ttggtgtcac atcttttact ttagactccg tgactgtcaa
    34201 ataattcaaa cctgtcatat tg
//
LOCUS       DASDYK010000019        32058 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.019, whole genome shotgun sequence.
ACCESSION   DASDYK010000019 DASDYK010000000
VERSION     DASDYK010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 32058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32058
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.019"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            196..891
                     /locus_tag="U0308_000932"
     CDS             196..891
                     /locus_tag="U0308_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2315905.1"
                     /translation="MNTLEKRQHEILTNPLHFCKKSGDFAKHSMSIKLSKNELFDVDF
                     VTGIYFVEKGIVMKGTQIDDYIGYDQLLKPGDVCNFSSFMSSDLKRNIGAQLLSPSSS
                     VITAVDRDFFIFMVEKHVSVEEFMLYQAKKEIMILQRRCLLNTLKVKDRVKHLIAAIG
                     YEYGISNGDNIQIPQELSTTFLSKFMGITREYLSLTLSELKKEDYLLNTKIPVVINVE
                     KLFNEIPYESLIL"
     gene            961..1839
                     /locus_tag="U0308_000933"
     CDS             961..1839
                     /locus_tag="U0308_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2315906.1"
                     /translation="MSEYLEIPELNKAFPFRSFINEGEVLVYPHWHKEIEIIYALKGS
                     LNLGVNDMPIQLKEGEIQVINGGDVHYFLASPSSERIVIQFDLSLFQEEMQMDGQMQT
                     LREMLTEMAHLSREWPEETVAKMQSLIMNIHSESSGEKPGKHYILKADLLAIIGLIYR
                     EIPQIKTQPDSVISEDAVLKSQETLHKLDQIFSYVEKHYQEPVSLQEVADYTGFSTYY
                     FTKFFKRNTGMTFVTFLNDYRLNKAKWMLLNEAFPVTEVAELAGFSSVKTFHHAFKRA
                     MGVAPLKYRKTIYGNN"
     gene            1914..2990
                     /locus_tag="U0308_000934"
     CDS             1914..2990
                     /locus_tag="U0308_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2315907.1"
                     /translation="MTLKVGIIGCGGIANGKHMPSLLKAEKAEMVAFCDIVLEKAEAA
                     AKEFGSENASVYTSYIELLQDKSIDVIHVCTPNISHAEISIAAMEAGKHVMCEKPMAK
                     TTEEAKSMIEAANRTGKKLTIGYQNRFRKDSDYLHQVCENGELGDIYYAKAKAIRRRA
                     VPTWGVFLDEEAQGGGPLIDIGTHALDLTLWMMDNYKPKYVVGNSYHKLAKKENAANA
                     WGSWDPNKFTVEDSAFGFITMENGATIVLEASWALNTLDVGEARTSLSGTEGGADMED
                     GLRINGEAHSQMYEKKIQLEAGGVDFYDGTGDDPALIEAEQWLEAIEKNTDPVVKPEQ
                     ALVVTQILEAIYESSKTGQPVYFN"
     gene            3006..3746
                     /locus_tag="U0308_000935"
     CDS             3006..3746
                     /locus_tag="U0308_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEM2315908.1"
                     /translation="MKAKIALQLWSVKEACEDDFFGTLEKVAEMGYDGVEFAGYYGKS
                     ASEIKAKLAELGLEVAGSHISKEQLEADLENVILFERELGNEYIICPYADFKTKQEWL
                     EFGGRLREITTTIQQAGMHFGYHNHAHELDKLDDEIILDSLLKNVPEMVAELDTYWIE
                     YAGIGVIPFIEKYRNRVPLIHIKDKSRANKESTIIGEGVLDVPGFVKTALQSGTTWLI
                     IEQEAFTQDPLTSVAKGYTYLANVLEEN"
     gene            3748..4470
                     /locus_tag="U0308_000936"
     CDS             3748..4470
                     /locus_tag="U0308_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose utilization protein ThuA"
                     /protein_id="HEM2315909.1"
                     /translation="MTRVTVWNEFLHEKEDDAVLAIYPNGIHGQIASFLEKAGIEAGT
                     ATLEEPEHGLTEEVLANTDVLIWWGHMGHDRVEDRIVDRVQKRVLEGMGLVVLHSGHM
                     SKIFMRLMGTSCDLKWREANERERLWVVDPTHPIAKGIGEFIELDEEEMYGEHFDIPT
                     PDELIFLGWFEGGEVFRSGITYKRGNGRIFYFQPGHESYPTYHHPDIQQVIINGVHWC
                     AEGRKNYPAYGNHQPLEKIGRK"
     gene            4473..5441
                     /locus_tag="U0308_000937"
     CDS             4473..5441
                     /locus_tag="U0308_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEM2315910.1"
                     /translation="MKLGVFTPLFANLSLDEMLDKVKAAGLDAVEIGTGGNPGNHHCP
                     TDELLASEAARKEYLEKFTSRGLTISAFSCHDNPISPNKEEAAASDEILRKSIKLASL
                     MNVPVVNTFSGTAGDSDDAKAPNWPVIPWPTVYSDIKTWQWETKLIPYWKEIGELAAA
                     SGVKIGIELHGGFLCHTPYTILKLREETNDAIGVNLDPSHLWWQGIDPVGAIKILGKA
                     GAIHHFHAKDTYLDQDNINMYGLTDMQPYGDVQTRSWTFRSVGCGHSLTEWSDIMSAL
                     RTYGYDYVVSIEHEDPLMSIDEGFDRAVTNLQSILIKDKPLDMWWA"
     gene            5464..6513
                     /locus_tag="U0308_000938"
     CDS             5464..6513
                     /locus_tag="U0308_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2315911.1"
                     /translation="MKKYQLVIIGYGGMGSYHVTLASAANNLEVHGVFDILAEKREAA
                     AQKGLKIYESFEAVLADEKVDAVLIATPNDSHKELAITALEAGKHVVCEKPVTMTSED
                     LLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTIGEMFHLESRVHGANGIPGD
                     WRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFALGDEVDDGFVTFITFEN
                     GITAQIEVGTTNFIKLPRWYVKGTEGTGIIHDWDLSGEIVKPTALAKTSEPTPIKAGQ
                     GLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFVDVLNNTSEPIVQNEEVYQVLKLIE
                     AIFEAAETNRTIHSI"
     gene            6607..6792
                     /locus_tag="U0308_000939"
     CDS             6607..6792
                     /locus_tag="U0308_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HEM2315912.1"
                     /translation="MSEDKGMKDKAKGLKDKVVGDAKDKFGKATDDKGKQVEGKAQKA
                     KGEVEDKTGDAKKKLSE"
     gene            6923..8824
                     /locus_tag="U0308_000940"
     CDS             6923..8824
                     /locus_tag="U0308_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2315913.1"
                     /translation="MTKKVLPKEASEFTKKVNEKVKKALPFENTKDFEDAKKGFIGTW
                     DHVKVDTEDGHAVWDLDDYKFIEGEAPDSVNPSLWRIAQLNMTNGLFKVTDRVYQVRG
                     FDMSNTTIMEGDTGLVITDTLMSVETARAALELYFEHRPKKPIKAIIYTHSHADHYGG
                     VAGLISKEDVTSGKVALIGPEGFMEAAVSENIFAGNAMIRRAEFMYGSRLSRGELGQV
                     DAGLGKTASKGHMSLLAPNDTITFDHEKRVVDGIEVEFLMAPNTEAPSEHMMYFPQFK
                     LLNIAEDAVHNLHNILTLRGAQIRDAYEWWKDIDKAIRAFGDKYEVCIGQHHWPTWGN
                     EEINDMLIHQRDAYKYMHDQTLHFINKGLTAIEVAEAVKFPPELEEKWYLRGYYGTLN
                     HDVKAIYQFYLGWYNGNPADLYPLPPEDVAKKYVEFMGGVDEVVKKARVSYEAGEYRW
                     VAEVVKHAVFADGENGEARALLADALEQLGYQSESGPWRNVFLAGADELRNSVPDEVI
                     SGVTLDIVEGMPFNLILDYMGIRLNGERSIGKRISMNWKLTDVDENYHLLVNNSVLIY
                     REGEVDDKADLTLTTTRDTFNHIFGGVKSFEAAFADQTAKLEGDAKKFGEFASLLDEF
                     NPVFNIVTP"
     gene            complement(8878..9219)
                     /locus_tag="U0308_000941"
     CDS             complement(8878..9219)
                     /locus_tag="U0308_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HEM2315914.1"
                     /translation="MFTKKRGLILLAAVLLTVCAIWEYAMPTDAAVKSYYVKVEDAGK
                     PVQKNQFKGFKYVSNVYDDKGKQKQLTFYSEKELTKNEQFKVLVGENKMVVNYKKIKN
                     VPDKIKYLAEK"
     gene            9755..12046
                     /locus_tag="U0308_000942"
     CDS             9755..12046
                     /locus_tag="U0308_000942"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEM2315915.1"
                     /translation="MKWGLQMTTYIVKDGGNRKLPFDKSRLDGYLEKIHEEFPKLDLE
                     DYKRKVFNFVEKKEDYAADELVDYLIREAEARTDIHIPEWEHFAARLYLNKLYKKASK
                     NRFYNDDDKYGSYVGLQESLGERGIYSGNILKNYSKEDLIAAGKLIDPEKDKLFTYNG
                     LYLLATRYLATDSERNVYELPQERWLTIALYLMQNEPKEKRMKLVEEAYWALSNLYMT
                     VATPTLANAGKVGGQLSSCFIDTVDDSLQGIYDSNTDVARVSKHGGGVGAYLGYVRST
                     GAAIRGVKGASGGVIPWIKQLNNTAVSVDQLGQRKGAIAVYLDVFHKDIESFLDLRLN
                     NGDQRLRAHDVFTAVCIPDIFMEAVERRGEWYLFDPHEVKAKKGWYLQDFYDESKGEG
                     TFREKYEELVADETISKKIVKAIDIMKRIMMSQLETGNPFMFYRDEVNRMNPNKHEGM
                     VYSSNLCTEIMQNMSPTKMIQEIISGDQIVITKQAGDFVVCNLSSVNLGRAVVAEEGT
                     LERLIEVEVRMLDNVIDLNELPVPQATITNQKYRSIGLGTFGWHHLLALKNIAWDSEE
                     AEKYADELYEQINYLAIRASNKLAQEKGAYKVFKGSDWNTGEYFARRNYNSPEWQELA
                     KEVAEKGLRNAYLVAVAPNMSTAQIAGSTASIDPIYSAFYYEEKKDYRRPVIAPDLNL
                     STYPYYEKGAYKVDQFASVRQNGRRQRHVDQSLSFNFYVPSGIKASKLLELHMTAWNE
                     GLKTTYYVRSNDIDVEECEWCSS"
     gene            12102..13151
                     /locus_tag="U0308_000943"
     CDS             12102..13151
                     /locus_tag="U0308_000943"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEM2315916.1"
                     /translation="MANQKEQLTRIKILEPLFPNRSTSIINGETSGILNWNDIPYPSF
                     YRAYKELSTNYWIPDEVDMKSDAKQYPALSEQEKYAFDAIIGLLATLDSPQTRFIYNI
                     AEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQNRVFELARTHPTIIKRNE
                     PIMDAYDDFMNNKTGETLVKALIQSSILEGINFYSGFAYFYNLVRQNKMTGTGKIISF
                     INRDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVLQGIE
                     GIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRN
                     SSYKKTNMDNGFDDL"
     gene            13148..13585
                     /locus_tag="U0308_000944"
     CDS             13148..13585
                     /locus_tag="U0308_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HEM2315917.1"
                     /translation="MRILLAYDSLSGNTKMVADEIEEILQSEGHEVVSFRVSPLAEYP
                     LDEDFDLYVLGAWTVDYGRTPPDMKDFIAELAVKPENVAIFGTGETQWGMEFYCGAVD
                     RMAKYFGTSYPTLKIEQMPHTEQDVADIDNWVKKILALRSGIK"
     gene            13582..13908
                     /locus_tag="U0308_000945"
     CDS             13582..13908
                     /locus_tag="U0308_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEM2315918.1"
                     /translation="MTSIEIKSPEEFQAHINGEELVYVDYWKDNCPNCKMLDLSFAEF
                     KNSEIASKVKVLKVKLEEMGENFFFDRDVQQTPTLVLYKGGEEIHRLNGFIPPNKIEE
                     AVSLNA"
     gene            14017..14316
                     /locus_tag="U0308_000946"
     CDS             14017..14316
                     /locus_tag="U0308_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HEM2315919.1"
                     /translation="MKQLQAEITAFLKERDWLDQYNHPKDLAISLSLEAAELLECFQW
                     KTDEIALKENREELLKEVADVLIYALQIAESMGADGEELVRMKLAENRRRTWPKK"
     gene            complement(14359..14535)
                     /locus_tag="U0308_000947"
     CDS             complement(14359..14535)
                     /locus_tag="U0308_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315920.1"
                     /translation="MKLAGLVLLLIGLIGFGFSFSITGLIGFGVCIISIILVIAGIFA
                     MIRSKKRRKRSYSY"
     gene            14734..15051
                     /locus_tag="U0308_000948"
     CDS             14734..15051
                     /locus_tag="U0308_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase
                     family protein"
                     /protein_id="HEM2315921.1"
                     /translation="MDFKEYQILANRTAATHEQALTNYGLGITGEAGEVADLIKKYAF
                     HGHDLDKESLTKELGDVLWYVSQIAKWADISMETVAELNIEKLKRRYPQGFSTERSKL
                     HID"
     gene            complement(15101..15742)
                     /locus_tag="U0308_000949"
     CDS             complement(15101..15742)
                     /locus_tag="U0308_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1361 domain-containing protein"
                     /protein_id="HEM2315922.1"
                     /translation="MTKAIWTCRAFLLGYFLVLHFTADTYTFLILNVGLAYIPFEIAV
                     FLTKKPRVWWIFWPLGIVWLVFFPNAPYLLTDLLHLQRLEIYGAEGILSTAPWLWRHF
                     TYIIVGVFFGLFIGFWSFAKMLAEIRRRFNWTSLLSYQLLLIGLILLSSYAIYIGRFS
                     RLHSIHLLTQPIDSLQIMFSVFHWPFWNFVFYFSIIQYVIYTLFSRFSSSLKN"
     gene            complement(15798..16805)
                     /locus_tag="U0308_000950"
     CDS             complement(15798..16805)
                     /locus_tag="U0308_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family putative sulfate export transporter"
                     /protein_id="HEM2315923.1"
                     /translation="MSQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAI
                     LIGIIIRALFPVPEKWFTGIQFSNKVILRAGIILLGFRLNLVDIYHAGWRVFLIAALC
                     LSFGITIVYFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKADNNQTAVAATII
                     ALLGTIFTVIYTLIYPILPLGPDGYGIFAGATLHEIAHVIAAADPGGSSAVDMAVIVK
                     LTRVALLVPVCFVVAKMVNAGTKNRFSWAELPVPWFIFGFLATSAINSFGIIPTSVTD
                     FLVICAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAALIGSVFLSAFGLALVLLFHLA
                     G"
     gene            16911..17765
                     /locus_tag="U0308_000951"
     CDS             16911..17765
                     /locus_tag="U0308_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2315924.1"
                     /translation="MDEALRTYIRVVELQSFTKAAEELHISQPAVSLQLKKLEEIYET
                     ELIYRQAKKFILTATGEILYHRAKQLEGLYKQVEDEISLYHHHLKGRLRIGASFTIGE
                     YFLPEVIAKFHALYPDITIELIIENTAKIADKVELLQVDTGLIEGQVSKKDLEISAFS
                     DDEMCIVGRADGSLTEIEQGATWIAREEGSGTREYLDHVLSTNGWNVAEKVVAWSNMA
                     VKQMVLEGMGYTVISKCVVQTEITSGKLQTFNEAGSLMRKFSVLKNRQRLENRIAETF
                     LTFLKENQ"
     gene            17834..18850
                     /locus_tag="U0308_000952"
     CDS             17834..18850
                     /locus_tag="U0308_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIC"
                     /protein_id="HEM2315925.1"
                     /translation="MKEYFIDRSYKASMGIANAVLVTLGIGLLLQTIGQMTGISFLVT
                     VGAIGKTMLIPGIGVGIAMCLHANTLVTISAAASAVIGGGAVATLAGGGVAITSGEPV
                     GAILAVIVAVWTGKRVTGKTKFDMILIPGVSLLAGGLSGILFAKIMAPILASVSLGIS
                     SLIGGSPLISSMVIAFVFGLLILSPASSAALAIALQLDPTASAAALIGCSVQFVSFAV
                     LSYRDNNWGAFFAQLICTPKLQTPNIIRKPSLMLVPLLTTLIAGPLGVMVFHIQAASE
                     VAGLGLCAFVAPLYLIANYGFSTLAAFILVAVVLPGVIALIVRPFLIKKERLKTGDLT
                     IELQ"
     gene            18965..19699
                     /locus_tag="U0308_000953"
     CDS             18965..19699
                     /locus_tag="U0308_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2315926.1"
                     /translation="MVRKLNKMYDASPLYAQIADDLREKIQTEVWQTGDKIPPELDLC
                     ELYNVSRITVRKAIDELVRENLLYRERAKGTFVRDWEEAEDEHFTLVRSFTNEMKELG
                     KKAATLHAEVEVINADKKIALQLGLSVGDKVLQIKRLRGTKDLAFALFISFIPYNQDY
                     SLKAEDYYGSFYEYLKGFGIVVNQEKEYIEAMLPNREVQEALAIDKQEPILKRVRMTK
                     QKESDFREYSECFYIGKHYRYYIDFE"
     gene            complement(19738..21480)
                     /locus_tag="U0308_000954"
     CDS             complement(19738..21480)
                     /locus_tag="U0308_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase"
                     /protein_id="HEM2315927.1"
                     /translation="MTTYDLAPEVKIHQFDGAWAGYKDIATELRTAIQKKKQDQTIVA
                     IECYPGTRNEEIAAELLPLLPVEKVVFADDWALNNEEVTATIQSHLTDDRVFGIMSHY
                     EVSDFYPAEKLAEIQAEIAATKGLVVVYGTGATVIAPTPDILIYADLARWEIQCRYRG
                     ENKPNWKADNAGEDALRKFKRGYFFEWRMADRQKKKLYQQVDFLLDTNKKNEPKMVRG
                     EDYRNGLNQVSKAPFRVVPYFDASVWGGQWMKNNFGLDPAADNYGWAFDGVPEENSLY
                     MRFGDIRIEVPSTNVVNHFPNELLGPKVHSRFGTEFPIRFDYLDTVGGGNLSLQVHPL
                     VEYAQDKFGIHYTQDESYYILEADNDSTVYLGTKEGTTKEAIMTDLEKAAEGNYRFPD
                     EKYINVFPVKKHDHILIPAGTIHCGGPSTVVLEISATPYIFTFKLWDWERTGLDGMPR
                     PVHLEHGRENLQLDRDTKWVKDNLINQFETLHEDNDSKVERTGLHELEFIETHRHWFK
                     ETVTVHTNDSVNMLNLVEGESAVVESIDDSFAPFEVHYGETFIVPAIVGTYQIRNTSD
                     NEEVAVIQAFVRNL"
     gene            21694..22359
                     /locus_tag="U0308_000955"
     CDS             21694..22359
                     /locus_tag="U0308_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2315928.1"
                     /translation="MEKSGFVADPIYGEIKNEIMANTLENGEKVDIEDIMKRFQVSKR
                     VAFSALHCLHKSGIVCKNIGESGFSVAVNSEAEHREKSRLKLAFFHLNYAVQKLQEQD
                     AEVCATCLRKELVYIKLAAKEQDTDVFINHVKNFYACMIHYTEMPAMEKNIDILSQTL
                     RNMKEKNEKLFFEAFTIDVSQALEDLVTHLEAKEFEKCHSVIQHFYDKNISILFSESK
                     NPE"
     gene            complement(22949..23422)
                     /locus_tag="U0308_000956"
     CDS             complement(22949..23422)
                     /locus_tag="U0308_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2315929.1"
                     /translation="MQIRLSKREDAASMIELEHLVWTPGTTPGSIHFDSEAEFLLKSP
                     PGSKIVVVADDKVVGILGYKSPIPLATNKHVAEIDIAVHPDYQRAGIGQLLMDKMKEV
                     AREKGFIKIALRVLSINQKAIRFYEKNGFKLEGRLEKEFIIQGEFVDDILMAYFL"
     gene            complement(23439..24674)
                     /locus_tag="U0308_000957"
     CDS             complement(23439..24674)
                     /locus_tag="U0308_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2315930.1"
                     /translation="MSKFWVITKQVYKRRVKTKSFLISLLFPVLIAALIAGIPKMVDY
                     FDSSSDITKLAVLAEDPVFAKSLAADKNHFKVNTDIKDKKSAQSALKDGKIDGFVTIT
                     QEDDSVSAVYTTQETAGQDTITRLTEDLTATKIAEKAAAYKITNEQLQSITSPVSVTN
                     DLESNNQLTNHEKDVMSAAVLILTLVIFIFVMSYANIVASEIATEKGTRIMEVILSSV
                     SATTHLFAKLTAIIFMLLTQIGFYIVCGAIVLIAGRNTEMVQNVLDQIAVFPAYYLVL
                     NLLFVILGLLLYILLAAMIGSMVPNVETVAQFIYPMTILAIIGYWGSIAAANAPDNML
                     VIIGSYIPTFSPMMMLARMDLLSVSTIGIFSSLAILLASVVGAFFLTVRLYQGNVLLY
                     SNDGLWKTWKTSLSYAKRK"
     gene            complement(24667..25569)
                     /locus_tag="U0308_000958"
     CDS             complement(24667..25569)
                     /locus_tag="U0308_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2315931.1"
                     /translation="MTLELHNVTKKFGTKVAVNDLSFRVEPGKILGLIGQNGAGKTTT
                     FRLILHFLEATSGKITWDGKEVSKIDPNIIGYLPEERGLYPNVTIEEQLIFFAELKGY
                     PKQKIKAEIDSWLERAEIVGKKTDLIKTLSKGNQQKIQLLSTIIHQPKLVILDEPFSG
                     LDPVNAEILKKFVFDLRASGAAIIFSSHRMENVEELCDSLLMLKKGNVVLQGTTESVK
                     AVFGRKRILIESSHSAAELATLPGVLNVQTHRDGVLQLEIENESDAEKIFEYVTKDGF
                     IQTFSLQAPTLEEIFKWKAGELNE"
     gene            25765..27222
                     /locus_tag="U0308_000959"
     CDS             25765..27222
                     /locus_tag="U0308_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator"
                     /protein_id="HEM2315932.1"
                     /translation="MLLTKSEHALINLFLTKNDFLTAKQLAEILDVSSKTIYRKIKNI
                     NETTGRKDIIISEKGRGFKLDYKAYIQAKLETTGDIFGYTPTERREKILLQVLFKSPK
                     YLNVTELYEDYYVGYNSIKNDFSLLNQAIEKYDLALEKRQKEIRVVGTEENIRTAINE
                     VINNLDLSTYDDLKTEYSDLNKADVQFIVRQMELIENKLMISIPYPYDINIFSHLYIL
                     INRFRQGEVEDFKESDDAYIVTNEKLHTIAVEAIDAIEQYLKMKLPERETFHFLQYLI
                     SSRFNHEIELVPGKILPIVEEMTDFYIEQVAAKINMPINKKQLKIELLSHMKPMVNRM
                     NHQINIKNNLLSDIKLEYGRLFEIIKETANDVAKTFKLNTISDDEVGYITIYFAKHME
                     ASPLVKRIIIMCSSGIGTSELLKVKVQKAFPDVEIVDVLSSTRFKNNLQDYQNIDFIL
                     TTINAESTKEIPSLLVSAMFTEKDKIMVKKLMESL"
     gene            27234..27707
                     /locus_tag="U0308_000960"
     CDS             27234..27707
                     /locus_tag="U0308_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2315933.1"
                     /translation="MDIQDLDISKVISPALVNLDLQATSKLEVIEELTDLLVETGAVA
                     DKDAFIADVLYREEEGKTGLGEGVAIPHGKSASVTSTSIAVGRTKKPVEWESLDDKPV
                     NIIILFAVKNSDATTTHIKLLQKVAILLADDEVIGQFQTVKTKEDLIKLLAKNQD"
     gene            27720..28031
                     /locus_tag="U0308_000961"
     CDS             27720..28031
                     /locus_tag="U0308_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIB"
                     /protein_id="HEM2315934.1"
                     /translation="MNIIGIAACTSGIAHTYIAKEKLTKAGTALGHNVHIETQGTIGI
                     EDELSAEQVKNADVVIIAADIKISGKDRFKGKRVVEIPTDLAIKAPKQIINKIDKEIN
                     N"
     gene            28048..29142
                     /locus_tag="U0308_000962"
     CDS             28048..29142
                     /locus_tag="U0308_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HEM2315935.1"
                     /translation="MKKLQIKKHALTAISYMLPLVVASGLLIAIGNLTNGQVIENYKA
                     PYSIPDALVSLGVLGMGLLAPVIAGAIAYSIADRPGIAPGLLMGLIANSIGAGFLGGM
                     LGGYLVGYFVLILVKYLKVPKWAQGLMPMMIIPLISSLVVGLLMYFVVGVPIVWATEA
                     MTSFLQGMQGSMRFVFGAVLGAMAAFDFGGPVNKVASLFADGLLLEGVKEPEAVKILA
                     SMVPPFGVTLSWVVSKLIKKKKYTKSEEDNIKIAFPMGICMITEGVIPIAAVDPIRVI
                     ISCTLGAAVGGGLSMTWGIGSPVPSGGMFIVPAMNEPLLFCLALLIGTCVTAAMLLIL
                     KREPTKEEELIADQGLEEEDEVDLSGIKIS"
     gene            29160..30014
                     /locus_tag="U0308_000963"
     CDS             29160..30014
                     /locus_tag="U0308_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase family
                     protein"
                     /protein_id="HEM2315936.1"
                     /translation="MYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPI
                     IIDLLQDHLTSHLGSRFLTKPIIKMAEEASVEVAINLDHGHDVAIVKQCLADGFSSVM
                     MDASSFPYEENVAITKKMVEFAEVYHASVEAEVGNIGAVTGDNYTNQEMYTDPKVAID
                     FAKRTGIDALAISYGSSHGDYPEGFTPAFQFDIVREIKSATNMPLVLHGGSGCGAENI
                     RESVRLGINKINVGSDFMKAQVNQIKTNLKENPAVNYVDLIHETIKAGTKAVKNYIQL
                     SGSTGKSL"
     gene            30031..30930
                     /locus_tag="U0308_000964"
     CDS             30031..30930
                     /locus_tag="U0308_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketose-bisphosphate aldolase"
                     /protein_id="HEM2315937.1"
                     /translation="MLVNMKQLLEVAKENKFAVGAFNVADSNFLRVVVEEAEKNNAPA
                     IIAVHPTELDFTKDDFFQYVLARIKNSPVPFVLHLDHGDNMGDVMRAVRCGFSSVMID
                     GSLLPFEENIRVTKEVVDVCHKLGVSVEGELGTIGKTGNSIEGGVSEIIYTKPEEAEE
                     YISRTGVDTLAVAIGTAHGIYPKDKEPKLRLDILKEIKDLVNIPLVLHGGSANPEAEI
                     AAAVEIGIQKVNISSDYKYAFYKKCREILSTTELWDANAIYPDCIDAAKEVVKYKMEL
                     FESIGQVEKYQQAKTTAWRSELI"
     gene            complement(30960..31670)
                     /locus_tag="U0308_000965"
     CDS             complement(30960..31670)
                     /locus_tag="U0308_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003722256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2315938.1"
                     /translation="MYLKETLDQFASIDNILKLLKKNPSFNKHCIQERLPQKTIITSN
                     KQRKHIYIIEEGFMKLIFDDNKPRDFSYILSKGAFPFLPVYTEDIPEHTMMVALTDIV
                     WWKIDISFFKGMMETEDPRNYLMLHQLAETRRRFYTIAYQEKLTSRESIYYSLSTMIE
                     FGLRISEKIVELPEFLTYQILADHANTSKSYTSKVLGHLREEGILESQRKPWRINDVQ
                     KLQKLIEMNVPLVKIQKN"
BASE COUNT        10643 a         5386 c         6608 g         9421 t
ORIGIN      
        1 attacctaaa aaaagcatag aaaaaatgtc acaaaaagta cttatttaga catattatgc
       61 ccaaaaaaag ttgattttaa tgaacaaata gtgaaaaagt tcttttttta tgatagtaac
      121 gttattttat ttagcttatt ccttctctag ggtgttttca ttgtgtgata ttatacttta
      181 gaggaggaat ttgcaatgaa cacattagaa aaacgacaac atgaaatttt gaccaatcca
      241 cttcattttt gtaagaagtc tggagatttt gctaagcata gtatgagtat taaactttct
      301 aaaaatgaac tgtttgatgt tgattttgtt acaggtatct actttgttga aaagggtatt
      361 gttatgaaag gaacacaaat agatgactat attgggtacg atcaattgct aaaacctgga
      421 gatgtctgta atttttcatc ttttatgtct tctgatttaa aacgcaatat tggtgctcaa
      481 ttactctcgc caagttctag cgtcatcacg gcagtagata gagatttttt catttttatg
      541 gtagaaaagc atgttagtgt agaagaattt atgctttatc aagcgaaaaa agaaattatg
      601 atactgcaac gtcgctgttt gcttaatacg cttaaagtga aagatcgcgt aaaacacttg
      661 attgctgcaa ttggttatga atatggtatt tccaatggag ataacattca aatcccgcaa
      721 gaattatcta ctacattttt atctaaattc atgggtatta caagagagta tcttagctta
      781 actctaagtg aactaaaaaa agaagattac ctattaaata ctaaaatacc tgttgttata
      841 aatgtagaaa aactttttaa tgaaattccc tatgaatcat taattttata aacttaagaa
      901 gatagtttaa cggctgtctt cttttttatg ctaaaatgaa agaaaaaaag gagtttcact
      961 atgagcgaat acttggaaat tccagaatta aataaagctt ttccttttcg ttcgtttatt
     1021 aatgaagggg aagttcttgt ttatccacac tggcacaaag agattgaaat tatttatgcg
     1081 ctaaaaggta gccttaatct tggcgttaat gatatgccaa ttcaattaaa agaaggagaa
     1141 attcaagtaa taaatggcgg agatgtgcat tattttttag cttcgccgag tagtgagcgc
     1201 atcgttatcc aatttgattt aagtttattt caagaagaaa tgcaaatgga tggccaaatg
     1261 caaacgttgc gcgaaatgct tacagaaatg gcacatttga gcagggaatg gccagaagag
     1321 acggttgcta aaatgcaatc tttaattatg aatatccatt ctgagtcaag cggggaaaag
     1381 cctgggaagc attatattct aaaagcagac ctactagcga ttatcggctt gatataccgg
     1441 gaaattcctc aaatcaaaac tcaacccgat agtgtgattt cagaagatgc agtcttaaaa
     1501 tctcaagaaa cattacataa attagatcaa attttttcct atgtcgagaa acactatcaa
     1561 gaaccggtca gcttacaaga agtagctgat tacactggat ttagcacgta ctatttcaca
     1621 aaatttttca agcgaaatac tggtatgacg tttgtgactt ttttaaatga ttaccgcctg
     1681 aataaagcaa aatggatgtt gttaaatgaa gctttccctg ttacagaagt ggccgaacta
     1741 gcaggattta gtagtgtaaa aacctttcat catgccttta aacgagcaat gggtgtagca
     1801 ccattaaaat acagaaagac aatatacggg aataattaag caataaaata ggaagattta
     1861 cctctagtag ttttgtatga tgtaactatc aaaactattg gaggtttttt attatgacat
     1921 taaaagttgg aattataggt tgtggaggca ttgcaaacgg gaagcatatg ccaagtttat
     1981 taaaagctga gaaagcagaa atggttgctt tttgcgatat cgttttagaa aaagcggaag
     2041 ccgcagcaaa agaatttggt agtgaaaatg caagcgtata cacaagctat atagaattac
     2101 tccaagataa atccatcgat gtcatccatg tttgtacacc aaatatttct catgcagaaa
     2161 tttctattgc ggctatggaa gctggaaagc atgttatgtg cgagaaacca atggcaaaaa
     2221 caaccgaaga agcgaaaagc atgattgaag ctgctaatcg tacaggaaaa aaactaacaa
     2281 ttggttacca aaatagattc cgcaaagact cggattactt gcaccaagtt tgcgagaacg
     2341 gcgaactagg cgatatctat tatgcaaaag caaaagcgat tcgtcgccga gctgtaccaa
     2401 cttggggtgt gtttttagat gaagaagcgc agggtggcgg accacttatt gatattggaa
     2461 cacatgcgct tgatttaacg ctttggatga tggacaatta taaaccgaaa tatgtagtag
     2521 gaaacagtta tcataaactt gccaaaaaag aaaatgcagc aaatgcatgg ggctcatggg
     2581 atccaaataa atttactgta gaagattccg cgtttggttt tatcacaatg gaaaacggcg
     2641 cgacgatagt attagaagca agttgggcgc ttaacacact cgatgtcggt gaagcaagaa
     2701 catctctatc gggaacagaa ggcggcgcag atatggaaga cggtttacga attaacggcg
     2761 aagcgcacag ccaaatgtat gaaaagaaaa ttcaattaga agcaggcggc gttgattttt
     2821 atgatggaac tggtgatgac ccagcgttaa tcgaggcaga acaatggtta gaagcaattg
     2881 aaaaaaatac agatcctgtt gtaaaaccag aacaagcact tgttgtaaca caaatcttag
     2941 aagctattta tgaatcatcg aaaacaggac aaccagttta ttttaattaa ggaggaagtg
     3001 cctttatgaa agcaaaaatt gcgttacagt tgtggagtgt taaggaagct tgtgaagatg
     3061 atttctttgg aacgttagaa aaagtggcgg aaatgggtta tgacggtgtg gagtttgctg
     3121 gttattacgg caaatccgcc agtgaaatta aagcgaaatt ggctgaactc ggactagaag
     3181 tagcaggatc tcatattagt aaagaacagc ttgaagcaga cttagaaaat gtcattttgt
     3241 tcgaacgcga attgggaaat gaatatatta tttgcccata tgcagatttt aaaacgaagc
     3301 aagaatggct tgaattcggc ggcagacttc gtgaaattac aacaactatt caacaagctg
     3361 ggatgcattt tggttatcat aatcatgctc acgaattaga taaattagat gacgaaatta
     3421 ttttggacag tttacttaaa aatgtaccag agatggttgc agaattagac acttactgga
     3481 ttgagtatgc gggaattggg gttattcctt ttatcgaaaa atatcgtaac cgggtaccac
     3541 taattcatat taaagataaa tcgagagcaa acaaggaaag cactattatc ggtgaaggtg
     3601 ttttggatgt gcctggtttt gttaaaacgg cgcttcaatc tggaacaacc tggctgatta
     3661 ttgaacaaga agcatttacg caagatccgc taacaagtgt ggccaaaggt tatacgtatt
     3721 tagcgaatgt attggaggag aactaatatg acacgtgtaa cagtatggaa tgaattttta
     3781 catgaaaaag aagatgatgc tgtgttggct atttatccga acggaattca tgggcaaatc
     3841 gctagctttc tagaaaaagc aggcattgag gcaggcacag ctactttaga agaaccagaa
     3901 catggcctta ctgaagaagt attagcgaat acggatgtac tgatttggtg gggacacatg
     3961 gggcatgacc gcgtagaaga tagaattgtc gatcgtgtgc aaaaacgcgt gttagaaggc
     4021 atgggacttg tcgtactaca ttctggtcat atgtcgaaaa tctttatgcg cctaatggga
     4081 acaagctgtg atttaaaatg gcgtgaagca aatgaaagag agcgcctttg ggtagttgac
     4141 ccgacgcatc cgattgcaaa agggattggt gaatttatcg agttggacga ggaagaaatg
     4201 tacggcgagc attttgatat cccgacacct gatgaactaa ttttcttagg ttggtttgaa
     4261 ggcggcgaag ttttccgaag cgggattacc tacaaacgag gaaatggtcg gattttctac
     4321 ttccaaccag gccatgaatc ctatccaacc tatcaccatc cggatattca gcaagtaatt
     4381 attaacggcg tacattggtg cgcggaaggt cggaagaatt atccggcata cggaaatcac
     4441 caaccacttg aaaaaatagg gaggaaataa acatgaaatt aggcgtattt acaccattat
     4501 ttgcaaattt atcattggat gaaatgttag ataaagtaaa ggcggcagga cttgatgctg
     4561 tcgaaatcgg gacgggcggg aaccctggaa atcatcactg tccaaccgat gaacttttag
     4621 cgagtgaagc agcgcggaag gaatatttag aaaaatttac tagtcgagga ttaacaatta
     4681 gtgcttttag ttgccacgat aacccgattt ctcctaataa agaggaagcg gctgcatctg
     4741 atgaaatttt gcgcaaatca atcaaactag cctctttaat gaatgttccg gttgttaata
     4801 cattttctgg aacagcggga gatagtgacg atgccaaagc gccgaactgg ccggttattc
     4861 cttggccaac tgtttatagc gatattaaaa cttggcaatg ggaaacaaaa ttaatccctt
     4921 actggaaaga aattggcgaa cttgcagcag ccagtggcgt taaaattggt atcgaactgc
     4981 atggtggttt cttatgccat acgccatata ccattttaaa actgcgggaa gaaacaaatg
     5041 atgctatcgg ggttaattta gacccaagtc atttgtggtg gcaaggaatt gacccagttg
     5101 gcgctatcaa aatcttagga aaagctggag cgattcatca tttccatgct aaagatacgt
     5161 atttagatca agataatatt aatatgtacg gtttaacgga tatgcaacca tatggtgatg
     5221 tacaaacgag aagttggaca ttccgttcgg ttggttgtgg gcacagtttg acagaatggt
     5281 cggacattat gagcgcgctt agaacatatg gttatgatta tgtagtcagc atcgagcacg
     5341 aagatccatt aatgtcgatt gatgaaggat tcgaccgtgc tgttacaaac ttacaatcga
     5401 ttttaattaa agataaacca ctggatatgt ggtgggctta acgataagaa agggtgtctt
     5461 aggatgaaaa aatatcaatt agtaattatt ggttacggcg ggatgggaag ctatcatgta
     5521 acgcttgcat cggctgctaa taatttggaa gttcacggtg tattcgacat tctagcagaa
     5581 aaacgtgaag ccgctgccca aaaaggtttg aaaatctatg aaagttttga agcggtttta
     5641 gcggatgaaa aagtagatgc agttcttatc gcgacaccga atgatagcca taaagaactg
     5701 gcgattactg cacttgaagc aggcaagcat gttgtttgcg agaaaccagt gacaatgaca
     5761 agcgaagatt tactagcaat tatggatgtg gctaaaagag taaataaaca ttttatggtg
     5821 catcaaaata gacgttggga cgaagatttc ctgattatta aagaaatgtt tgaacaaaaa
     5881 acgatcggtg aaatgttcca cttagaatca cgtgtccacg gagcaaatgg tattccagga
     5941 gattggcgtc atttgaaagc acatggcggc gggatggtac ttgattgggg tgtgcatcta
     6001 cttgaccaat tgttattcct agtagatagt aacgtgaaat ctgtatctgc taatctaagt
     6061 tttgcgcttg gggatgaagt cgatgatggc ttcgtcacgt tcattacttt cgaaaatggc
     6121 attaccgctc aaattgaggt aggcacaacg aacttcatta aattacctcg ctggtatgtc
     6181 aaaggtacag aaggaactgg aattatccac gactgggatt taagcgggga aatcgtcaaa
     6241 ccaaccgcac tcgctaaaac gtctgagcca acgccaatta aagcagggca agggcttaca
     6301 aaaacaatgg caccaccaag cgaagaagca accaatacat tatcgcttcc agcacctgcc
     6361 aaattagctc catcttttta taataatttt gtcgatgttt taaataatac gagtgaacca
     6421 atcgttcaaa atgaagaagt ttatcaagtt ttaaaattga ttgaagccat atttgaagcg
     6481 gctgagacaa atcgaactat ccattctatt taaaaaagat gttttagctt cctaaactgt
     6541 ggaaaacact actatggaga taaagaattc ttcattagaa aatattctaa ttaggaggca
     6601 atatcaatga gcgaagataa aggcatgaaa gacaaagcaa aaggacttaa agacaaagta
     6661 gtaggtgacg caaaagacaa gttcggtaaa gcaacagatg ataaaggcaa acaagtagaa
     6721 ggtaaagctc aaaaagctaa aggcgaagta gaagataaaa ctggcgacgc taaaaagaaa
     6781 ttatccgaat aagttaaaaa gagcggcttg aatttttcaa gccgctcttt ttttggtcca
     6841 ataatagcaa aaggttttga ataattttac ggaggtataa aaagaaagta tgtgaaaata
     6901 aacgtgcagg aggaaaccga taatgacaaa aaaagtctta ccaaaagaag cgtctgaatt
     6961 tacaaagaaa gtgaatgaga aagtaaaaaa agctttacca tttgagaaca cgaaagattt
     7021 tgaagatgca aagaaaggct ttattggcac ttgggatcat gtaaaagttg atacggaaga
     7081 tggccatgca gtttgggatt tggatgatta taagtttatc gaaggagaag cacctgattc
     7141 tgttaaccca agtttgtggc gtatcgctca acttaatatg acaaatggtt tattcaaagt
     7201 aacggaccgg gtttatcaag tacgcggctt tgatatgtcg aatacgacga ttatggaagg
     7261 cgatactggc cttgtcatta cagatacatt aatgtcggtt gaaactgccc gtgcggcgct
     7321 tgaattatac tttgagcatc gtccgaaaaa acctattaag gcgattattt atacgcattc
     7381 ccatgccgat cattacggcg gtgtagcggg tctaattagc aaagaagatg taacctctgg
     7441 aaaagtggca cttattggac ctgaaggctt tatggaagcg gcggtcagcg aaaatatttt
     7501 tgctggaaat gcaatgattc gtcgtgcgga atttatgtat ggtagccgtt tgtcacgcgg
     7561 ggaattaggt caagtggatg caggacttgg taaaacagcg tccaaaggcc acatgtcctt
     7621 acttgctcca aatgatacta ttacgtttga tcatgaaaaa cgcgtggttg atgggattga
     7681 agtggaattc ttaatggcgc cgaatacaga agctccatca gaacatatga tgtatttccc
     7741 gcaatttaaa ctacttaata ttgcagaaga tgctgttcat aacttgcata acattttaac
     7801 attacgtggt gcgcaaattc gtgacgctta cgagtggtgg aaagatattg acaaagcgat
     7861 tcgtgcgttt ggtgataaat atgaagtttg tatcggtcaa catcactggc caacgtgggg
     7921 taatgaagag attaatgaca tgcttattca ccaacgtgac gcttataaat atatgcatga
     7981 ccaaacgctt cattttatta ataaaggatt aactgccatt gaagtggctg aagctgtgaa
     8041 attccctcct gaactagaag aaaaatggta tttacgagga tactacggca cgcttaacca
     8101 tgatgttaaa gcgatttatc aattttatct tggttggtat aacggaaatc ctgctgacct
     8161 ttatccgcta cctccagaag atgtggcgaa aaaatacgtc gagttcatgg gtggcgttga
     8221 tgaagtagtg aaaaaagcgc gtgtatccta tgaagcgggt gaatatcgct gggttgcgga
     8281 agttgtcaaa catgcggttt tcgcagacgg agaaaacgga gaagcaagag ctcttcttgc
     8341 agatgcgtta gaacaacttg gctatcaatc tgagtccgga ccatggcgta atgtattttt
     8401 agccggagca gacgaactga gaaattctgt cccagatgaa gttatttctg gtgttacact
     8461 ggatattgtt gaaggtatgc cgtttaactt gattttagat tacatgggta ttcgtttaaa
     8521 tggggaaaga tccatcggta aacgtatctc catgaactgg aaattaacag atgttgatga
     8581 gaattatcat ttacttgtaa ataattccgt acttatttat cgtgaaggtg aagtagacga
     8641 taaagctgat ttaactttaa ctactactcg tgatacattt aatcatattt tcggtggtgt
     8701 gaaaagcttt gaagcagcat ttgctgacca aacagctaaa ttagaaggag acgcgaagaa
     8761 atttggggag tttgcttcct tgttagatga atttaatcct gtcttcaata ttgttacacc
     8821 ttaataaaaa caaaaaacgc tttgtttagc cttttatcag gctataacaa agcgttttta
     8881 tttttcagct aaatatttaa ttttatctgg tacgtttttg atttttttat aattaacaac
     8941 cattttgttc tcgccaacaa gtactttgaa ttgctcgttc ttagttaatt ctttttctga
     9001 gtagaaagtt agttgttttt gttttccttt gtcatcataa acattcgata catatttgaa
     9061 ccctttgaat tgattttttt gaacgggttt tcctgcgtct tctactttta cgtaatagga
     9121 tttcactgcg gcgtcagttg gcatcgcata ctcccaaatc gcgcaaacag ttagaagaac
     9181 tgcagctaat aatattaaac ctcttttttt agtaaacatt tctccttcat cctttcttga
     9241 tttgttttat tacattaagt ttacaatgga atgacaaaat tatcccgttt gttaactaac
     9301 aaaatccagc gttaatctta catttttgtc agaaaggtaa caaaagtgag tttaaaagat
     9361 tgtgaagtta caaaacatcc tttttttaac tactaaatat agaaactagc gaaaaaatag
     9421 gcactagaag tagtagcatt tttatacttg aaatatgctc gaaaacacac aagtgccgga
     9481 aaaaattttt ttatttgctg aaaaccttgt tgtaatcatt gtttagacac ttttcgtaat
     9541 aaaaccagag tactatatct tgcattcaca atgaaaaagt tatactatat atagtatcga
     9601 aagcgaaata ttgcttcatc gccttttaac ttttatcagg ggaatttgct cctttaaaag
     9661 ttaatttttt tgctccatgg aacgaccaca atagttcagc ggacgaataa aaagcgcaaa
     9721 gtgaatcaga tatttttaca acgaggaaaa aaggatgaaa tggggattgc aaatgacaac
     9781 ttacatagta aaagacgggg gaaacagaaa gctacctttt gacaaaagcc gattggatgg
     9841 atatttagag aaaatccatg aagaatttcc gaaacttgat ttggaggatt acaaacgtaa
     9901 ggtttttaat tttgtagaga agaaggaaga ttatgcggct gacgaattag tcgattattt
     9961 aattagggaa gcagaagctc gtactgatat tcatattcct gaatgggaac atttcgcagc
    10021 acgcctttat ttaaataaat tatataaaaa agcaagtaaa aatcgtttct ataatgatga
    10081 tgataaatat ggttcgtacg ttggactaca agagagtcta ggcgaacgtg gtatttattc
    10141 tggcaatatt ctaaaaaatt attctaaaga agatttgatt gcagcaggga aattaattga
    10201 ccctgaaaaa gataaattat tcacttataa tggtttgtat ttacttgcga ctcgttactt
    10261 agcgactgac tctgaacgta atgtgtatga gttgccacaa gaacgttggt taactatcgc
    10321 actttattta atgcaaaatg aaccaaaaga aaaacggatg aaactagtag aagaagctta
    10381 ctgggcttta agtaatttat atatgactgt tgcaacaccg acacttgcaa atgctggaaa
    10441 agttggcggt caattgtcta gttgtttcat tgatactgta gatgatagct tgcaaggtat
    10501 ttatgacagt aatacagacg tcgctagagt ttctaagcac ggtggtggtg ttggcgcata
    10561 tcttgggtat gttcgttcaa caggagctgc tatccgcggc gtcaaaggcg caagtggtgg
    10621 cgttattcct tggattaaac aattaaacaa tactgcggtt agcgtagatc aattaggtca
    10681 acgtaaaggc gcgattgcag tttatttaga tgttttccat aaagatatcg aatctttcct
    10741 tgatttgcga ttaaacaatg gtgaccaacg tttacgcgca catgatgtat tcactgcagt
    10801 ttgtatccct gatattttca tggaagctgt agaacgtcgt ggcgagtggt atttgtttga
    10861 tccacatgaa gtaaaagcga aaaaaggctg gtacctacaa gatttctacg atgaatcaaa
    10921 aggtgaaggt actttccgtg aaaaatatga agaactagta gcagatgaaa caattagcaa
    10981 aaaaattgtt aaagctattg atatcatgaa acgtattatg atgagtcaat tagaaacagg
    11041 gaatccattc atgttttacc gtgatgaagt aaacagaatg aaccctaata aacatgaagg
    11101 catggtgtat tctagtaact tatgtacaga aatcatgcaa aatatgagcc caacaaaaat
    11161 gattcaagaa attatttctg gagatcaaat tgttatcaca aaacaagcgg gagattttgt
    11221 tgtatgtaac ttatcttctg ttaacctagg tcgtgcggtt gttgctgaag aaggtacttt
    11281 agaacgttta atcgaagtag aagtacggat gttagataac gttatcgact taaacgaact
    11341 accagtacca caagctacta tcacgaacca aaagtaccgt tctatcggac ttggaacatt
    11401 tggttggcac catctgcttg ctcttaaaaa tatcgcttgg gactcagaag aagcggagaa
    11461 atatgccgat gaattatatg aacaaattaa ctatttagct attcgcgcaa gtaacaaact
    11521 agcgcaagaa aaaggtgctt ataaagtctt taaaggcagt gattggaata ctggagaata
    11581 cttcgcgcgt cgtaactata attcacctga atggcaagaa ttagcaaaag aagtagcaga
    11641 aaaaggtttg cgtaatgcat atcttgtagc tgtagcacca aatatgagta cagctcaaat
    11701 tgctggatcc actgcttcaa tcgacccaat ttacagtgca ttctactatg aagagaaaaa
    11761 agattaccgt cgtccagtta ttgcaccgga cttaaactta agcacatacc catactacga
    11821 aaaaggtgct tacaaagttg accaattcgc aagcgttcgt caaaacggtc gtcgtcaacg
    11881 tcacgtagac caatcactaa gctttaactt ctatgtacca agtggtatca aagcaagtaa
    11941 actacttgaa ctacacatga cggcttggaa tgaaggactt aaaacaactt actatgttcg
    12001 ctctaacgat atcgatgttg aagagtgcga atggtgctca agctgataca tctctaaaat
    12061 actttacact tagtacaaaa tgaaagggag ggcttgccta gatggctaac caaaaagaac
    12121 aactgacacg tattaaaatt ttagaacctt tatttcctaa tcgttctact tcaatcataa
    12181 acggagaaac tagtgggatt ttaaattgga atgacatccc gtatccttct ttctaccgtg
    12241 cgtataaaga actttctact aactactgga ttccagatga agtagacatg aaaagcgatg
    12301 caaaacaata tcccgctctt tcagaacaag aaaaatatgc ttttgatgca atcattggct
    12361 tgctagcaac actggattct ccgcaaacac gttttattta taatattgcg gaatatatta
    12421 ccgatccagc tgttcatgca aacgcagcga ttatcgcgca acaagaagtc attcataatg
    12481 agagttattc ctatgtactt gcatctatta ccaatttaca agaacaaaat cgcgtatttg
    12541 aacttgcgag aacacatccg acaatcatca aacgtaatga gccaatcatg gacgcatatg
    12601 atgacttcat gaataacaaa acaggtgaaa cacttgtaaa agcattaatt caatcttcta
    12661 ttttagaagg aattaatttc tatagtggtt ttgcttactt ctacaatctt gttcgtcaaa
    12721 ataaaatgac tggaacaggg aaaataatta gctttatcaa tcgtgatgaa cttgctcact
    12781 cgaagttcat ttcagaagta atccgggcaa tccttggtga aaacccagaa ttacaaacag
    12841 aagagctagt agaatacaca catgatgctt tccgccacgc tgttgaactt gaaacagaat
    12901 ggtctgaaga agtgttacaa ggtattgaag gtattgatgt ggaagaaatg gttgactacg
    12961 tgaaatatcg ggccaacaaa atgctaggaa tgcttggtat tccagaactt tatccaggac
    13021 atagtgataa cacaatgaca tggattaaag catacgcaga taactttaca gaaacaaaaa
    13081 ccgacttttt cgaaatgcgc aattcaagct ataaaaaaac gaatatggat aacggattcg
    13141 acgatttatg agaattttgt tagcctatga ttctctaagt ggtaatacga aaatggtggc
    13201 tgatgaaatt gaagagattt tacaaagcga aggacatgag gttgtgtcct ttcgcgtatc
    13261 tcctctagcc gagtatccgc ttgatgagga ttttgacttg tacgtgttgg gggcatggac
    13321 agtcgactac ggaagaacac cgccggatat gaaagatttt atcgcggaac tagccgttaa
    13381 gcccgagaat gtagccattt ttggtactgg ggaaacacaa tggggtatgg agttttattg
    13441 cggagctgtt gaccgaatgg caaaatactt cggcacaagc tacccgactt taaaaataga
    13501 acaaatgcca cacacagaac aagatgtggc tgatatagac aattgggtca agaaaatttt
    13561 agcgttaagg agtggaatca aatgacaagt attgaaatta aatcacctga agagttccaa
    13621 gctcatataa atggagaaga attagtatat gtagactatt ggaaagataa ttgtcctaat
    13681 tgtaaaatgc ttgatctttc ttttgctgaa ttcaaaaact ctgaaatcgc aagcaaagtg
    13741 aaagtattaa aagtaaaatt agaagaaatg ggcgaaaatt tcttttttga ccgtgatgta
    13801 caacaaacgc caacacttgt actttacaaa ggcggcgaag agatccaccg tttaaatgga
    13861 tttattccac caaacaaaat tgaagaagca gtttcattaa acgcgtaatt taatgagagt
    13921 agcaggtctc cttgtaaata ggtggcttgg tgctcatttt tttacaagta cttgcgatat
    13981 ttttcacaaa taaattcttc taaaggagtt aaaatagtga aacaactaca agctgaaatt
    14041 actgcttttc taaaagagcg tgattggcta gatcaataca atcatccaaa agatttggca
    14101 atttcattgt cacttgaagc agcagaatta cttgaatgct ttcagtggaa aacagatgaa
    14161 atagcgttaa aagaaaatcg tgaagaactt ttaaaagaag tagctgatgt gcttatctat
    14221 gctcttcaaa ttgcagagag tatgggggcg gacggcgagg aacttgttcg aatgaaatta
    14281 gcagagaatc gtaggagaac ttggccaaag aaataaaaaa agctgcttta ccaaatgatg
    14341 ataaggcagc tttttatttt aataagaata agaacgttta cggcgttttt tggaacgaat
    14401 cattgcaaaa attcctgcta taactaagat aatagaaatg atacatacac caaaaccgat
    14461 aagtccggta atgctaaacg aaaagccaaa accaatcaaa ccaatcagaa gtaacactaa
    14521 gccagctaat ttcatttgaa aactcctttc agaaatctta tctctattat ataggaatta
    14581 tctgaaaaaa ataagacttt aaagataaaa aatttttaaa gatgaaatgc attgatagag
    14641 catcagttcg cataagttgg aaatagtcaa gactgcaaag gaaaaaaatt atctgttata
    14701 gtaagaaagt gagagaagca aggaggaaaa catatggatt ttaaagagta tcaaatttta
    14761 gcgaatagaa ctgctgcaac acacgaacag gcactaacaa attacggact tggtattact
    14821 ggagaggccg gtgaagttgc cgatttgatt aagaaatatg cttttcatgg acatgattta
    14881 gataaggaat ctctaacaaa agagctaggg gatgtacttt ggtacgtatc acaaattgct
    14941 aaatgggcag atataagcat ggaaacagta gcagaattaa atatcgagaa attaaagcgt
    15001 cgttatcctc aaggtttttc aacagagcga agtaagctac atatcgatta aaaaaacgtt
    15061 tgtatttaag aaaattaatt ttcctaaaat acaaacgttt ttagtttttt agtgagctag
    15121 aaaacctgct aaatagcgta taaattacat attgaataat cgaaaagtaa aacacaaaat
    15181 tccaaaatgg ccagtgaaaa acactaaaca taatttgcaa tgagtcaatt ggctgcgtaa
    15241 gtaaatggat ggagtgtaaa cgagagaacc gtccaatgta tatcgcataa ctagataaca
    15301 aaattaatcc tatcaaaagt aattgataac ttagtaaact agtccaatta aatcgtcttc
    15361 ttatttctgc aagcattttt gcgaaagacc agaatccaat aaataatcca aagaacacac
    15421 cgacgataat ataagtgaaa tgtcgccata accaaggtgc tgttgaaagt attccttctg
    15481 ccccgtatat ttctaaacgt tgtaaatgaa gtaaatcagt taaaagatac ggtgcatttg
    15541 ggaaaaatac tagccaaaca atacctagtg gccaaaaaat ccaccagacg cgaggttttt
    15601 ttgtgagaaa tactgctatt tcgaaaggta tataagcaag cccgacattt aaaattagaa
    15661 aagtgtaagt atctgcagtg aaatgcagca caagaaagta tccgagtaag aacgctcggc
    15721 aagtccaaat tgctttcgtc atgaaatagt cacctcgtgt ttgctattgt atcacaaatc
    15781 gaggtgacga ggacatctta acctgctaaa tgaaacaaaa gtactaaagc tagaccaaat
    15841 gcggaaagga aaacagaacc gattaacgcc gcagcaaaag gttttccacc catttttccg
    15901 aacgatggca agtggacatt taaaccgagt ccgcccattg acatagcaat gaggaaatat
    15961 gcgcagatga caagaaaatc agttacagat gttggaataa ttccaaagct gttaattgca
    16021 ctagttgcta aaaagccgaa aataaaccaa ggtacaggaa gttcagccca agaaaaacgg
    16081 tttttagttc cagcattaac catttttgca acaacaaagc agactggaac aagtaaggct
    16141 acacgtgtta atttaacaat aaccgccata tcaacagctg atgagccgcc tggatctgca
    16201 gctgcaataa cgtgggcaat ttcatgaagt gtagcccctg caaaaatccc ataaccgtct
    16261 ggtccaagtg gcagaattgg ataaatcaac gtatagataa cagtgaaaat agttccaagt
    16321 aatgcaataa ttgtagcagc cacagccgtt tggttattat cagcttttac ttgtggagaa
    16381 attgcaacta ctgcagcagc accacaaatc cctgtaccac aagcgaccaa aatagctagt
    16441 tttttatcca ctccaaaaag tttggctaag aaataaacaa tagtaatacc aaagctaagg
    16501 cataaggcag caatgagaaa cacgcgccag ccagcatgat aaatatcaac taagttcaag
    16561 cgaaaaccaa gtaaaataat cccagcacga agaattacct tgttggaaaa ctgaatacca
    16621 gtaaaccatt tttcaggaac tgggaaaagt gcacgaatga taataccaat taaaatagca
    16681 gttacaagtt gtccgagaat cattaaaaaa ggcaacttcg ctaaaaaata agataaggta
    16741 gcaatacaga aagtaagcgc aataccatac caaaaagtct tcgttttaaa taaaatttga
    16801 ctcatgttca tccccctttc ttttatactt ttactttacc attcttgatt ttattagtaa
    16861 aatttatatt aattatatta ttgataagtt atttttatgg aggtgttact atggatgagg
    16921 cattaagaac atatatccga gtagtagaat tgcaaagttt tacaaaagca gctgaagaat
    16981 tacacatttc gcaacccgct gtatcgttgc aattaaagaa attagaagag atttatgaaa
    17041 cagagcttat ttacaggcag gctaaaaagt ttattttaac agcaacagga gaaattttat
    17101 atcaccgtgc caagcaatta gaaggtctat ataaacaagt ggaagatgaa ataagtttat
    17161 atcaccatca tttaaaaggt cgacttcgaa ttggtgctag ttttacgata ggagagtatt
    17221 ttttgccaga agtgattgcg aaatttcatg ccctttatcc ggatattaca atagaactaa
    17281 tcattgaaaa taccgcgaaa attgctgaca aagtggaact tcttcaagtg gacacagggc
    17341 ttattgaagg ccaggtaagt aagaaagatt tggagataag tgctttttcg gatgatgaga
    17401 tgtgtatcgt tggtcgagca gacggttcac ttaccgaaat cgaacaagga gcaacttgga
    17461 ttgcgcgaga agaaggctca ggaacgcgtg aatatttgga tcatgtatta agtaccaatg
    17521 gctggaatgt tgctgaaaaa gttgttgctt ggagtaatat ggcggtcaaa caaatggttc
    17581 ttgaaggaat gggctacacc gttatttcta agtgtgttgt tcaaacagaa attacatcag
    17641 gaaaactgca gacgtttaat gaggctggta gcttaatgcg gaagttttcg gtactaaaaa
    17701 acagacaaag acttgaaaat cgaattgctg aaaccttttt aacattttta aaggaaaacc
    17761 agtaaataaa actagctttt taattaacta gtgattacaa tgagaaagaa tacattttag
    17821 aaagggagaa gcaatgaaag aatattttat agatcgttcc tataaggctt ctatggggat
    17881 tgcgaatgcg gttcttgtaa cgcttggaat tggacttctt ttacagacaa ttgggcagat
    17941 gacagggatt tcatttcttg taacggttgg agcaattggt aaaacgatgt taattccggg
    18001 aattggtgtt ggtattgcga tgtgcttgca cgcgaatacg cttgtgacga taagtgcggc
    18061 agcctctgct gttattggtg gtggggcagt ggcgacgtta gctggtggcg gagttgctat
    18121 tactagcgga gaaccagtcg gagctatttt ggctgttatt gtggcagttt ggactgggaa
    18181 gcgagtcact ggaaagacga aatttgatat gattttgatt cccggtgttt cacttttagc
    18241 tggcggacta agcggtattt tatttgcaaa gattatggcg ccgattttag cttctgtaag
    18301 tcttggaatt agttcattaa ttggtggttc gccgctgatt tcatcgatgg ttattgcttt
    18361 tgtgtttgga ttactgatac ttagcccagc ttcttctgct gcgctcgcga ttgcgcttca
    18421 acttgatcca acagcaagtg ctgcggcgtt gattggttgc tcggttcaat tcgtgtcatt
    18481 cgcggtgtta agttatcggg ataataactg gggtgcattt tttgcccaac ttatctgtac
    18541 acctaaatta caaacaccta atattattag aaagcctagc ctcatgttag taccactatt
    18601 aacaacacta attgctggac ctcttggtgt gatggtattt cacattcaag ccgcaagtga
    18661 agttgcaggc cttggcttat gcgcctttgt tgcacctctt tatttaatag caaattacgg
    18721 attcagcaca cttgctgctt ttattttggt agcagttgtc ttgccaggtg ttattgcact
    18781 tattgtcaga ccgtttctta ttaaaaagga acgcctcaaa acaggtgatt taacgattga
    18841 gttgcagtag aatagtttaa aaagtagggc ttaatagctc tactttttat attggaattt
    18901 tggataagct tatgctatga ttcattgtga tgacaataat acaatttgag aaggaaggct
    18961 tactatggtg agaaagttaa ataaaatgta cgatgcatct ccgctctatg cgcaaatagc
    19021 tgatgattta cgagaaaaaa tccaaacaga agtttggcaa actggagata aaattccacc
    19081 agagcttgat ttatgtgagt tatacaatgt cagtagaatt accgttcgaa aagcaattga
    19141 tgaactcgtt cgtgagaatt tactttatag agagcgcgcg aaaggtactt ttgtacgtga
    19201 ctgggaagaa gcagaggatg agcattttac gttagtgcgc agttttacga atgagatgaa
    19261 agaacttggt aaaaaggcgg ctacgctaca tgcggaagta gaagtgatca atgccgataa
    19321 aaaaattgcg ttacagctag ggctttctgt cggggacaag gtgctacaaa ttaagcggct
    19381 acgcggtacg aaagacttgg catttgcttt atttatcagt tttattcctt ataatcaaga
    19441 ttactcactt aaagcagaag attattacgg ttctttttat gaatatttga aaggcttcgg
    19501 tattgtcgtg aatcaagaaa aggaatatat tgaagcgatg ttgcctaatc gtgaagtaca
    19561 ggaagcgctc gcaatcgaca aacaagaacc aattttgaaa agggtgcgga tgacgaaaca
    19621 aaaagaaagt gattttagag aatacagcga atgtttttat ataggaaagc attatcgcta
    19681 ttatattgat tttgaataaa agaaagccta tcaaaaatat tgataggcat ttctttttta
    19741 taaattacgt acaaaagctt gaataacagc cacttcttca ttatcgctcg tatttctgat
    19801 ttgataagtt ccgacaatcg caggaacgat aaatgtttct ccataatgca cttcaaacgg
    19861 tgcgaaagag tcgtcaatac tttcaacgac agcactttct ccttctacca aattgagcat
    19921 attgacgcta tcgtttgtat ggacggtaac cgtttcttta aaccagtggc ggtgggtttc
    19981 aataaattct aattcatgca aaccagtgcg ctctactttt gaatcgttat cttcatgtaa
    20041 tgtttcaaat tggtttatta agttgtcttt tacccatttg gtgtcgcggt caagctgtaa
    20101 attttctctg ccgtgctcta aatgaacagg gcgaggcatg ccatcgagtc cagtgcgttc
    20161 ccagtcccat aatttaaacg tgaagatata aggagttgca ctaatttcta ggacgacggt
    20221 acttggacca ccacaatgaa tcgtcccagc tggaattaaa atatggtcat gtttttttac
    20281 agggaagaca ttaatatatt tttcatcggg aaaacggtaa tttccttcag cggctttttc
    20341 taaatctgtc ataatcgctt cttttgttgt accttctttt gttccaagat acacggtaga
    20401 gtcgttatct gcttctaaaa tataataact ttcatcttgg gtataatgga taccgaactt
    20461 atcttgcgca tactctacta atggatggac ttgcagactt aaattccctc cacccactgt
    20521 atcgagatag tcgaaacgaa tcgggaattc cgtaccgaaa cggctatgta cttttggccc
    20581 aagtaattca ttcggaaaat ggtttactac attggtagac ggaacttcaa tccgaatatc
    20641 tccaaatcgc atgtataaac tattttcttc tggaacgccg tcaaatgccc agccgtaatt
    20701 atcagctgca ggatcaagcc caaagttatt cttcatccac tgacctcccc atacacttgc
    20761 atcaaagtaa ggaactactc taaaaggggc cttggaaact tgattcaagc catttcgata
    20821 atcttctccg cgcaccattt ttggctcatt ttttttattg gtatcaagta agaaatctac
    20881 ttgttgataa agctttttct tttgccgatc agccatgcgc cactcgaaga aataaccacg
    20941 cttgaactta cgaagcgcat cttcaccggc attgtctgct ttccagttag gtttattttc
    21001 tccgcggtag cggcactgaa tctcccatcg agctaaatca gcataaataa gaatgtctgg
    21061 tgttggtgct ataacagttg cgccagtccc gtaaaccaca actaaccctt tagtagcagc
    21121 aatttccgct tgaatttcag caagtttttc tgctggataa aagtcgctca cttcatagtg
    21181 ggacataatg ccgaacaccc ggtcatctgt taagtgagat tggattgtag ctgttacttc
    21241 ttcattgttt aatgcccaat catctgcaaa aaccactttt tcgactggta ataatggaag
    21301 tagttcggca gcaatttctt catttcgtgt tccggggtaa cattcaatcg caacgatagt
    21361 ttggtcttgc ttcttttttt gaatagccgt tcttagttct gtagcaatat ctttgtaacc
    21421 cgcccaagca ccatcaaatt ggtggatttt cacttcgggt gctaaatcgt acgtggtcaa
    21481 aacaatcact ccttgattat attgttatta caatataaat atagcattgt atatctattt
    21541 tgtcattaca atctattgtc tatttttgtt ataacaatac aatcgttttt gtaacgtaat
    21601 ggacacattt tttcgcaaaa agccatatct aaatggaaaa atttcgtgta aaatataaca
    21661 ttgaaagcaa taaaaaataa agaggttcga attatggaaa aaagtggatt tgttgcagat
    21721 ccgatttatg gagaaatcaa gaatgagata atggccaata cgttggaaaa tggcgagaaa
    21781 gtggacatag aagacatcat gaaacgattt caagtcagca aacgagtagc ttttagtgcg
    21841 ctccattgtt tacataagag tggtattgtg tgcaaaaaca ttggggaaag cggtttttca
    21901 gtcgccgtga atagtgaagc tgagcatcgc gaaaaatcac gattaaagtt agcttttttt
    21961 catctaaatt atgctgtaca aaaactacaa gaacaagacg cagaagtatg cgcaacatgc
    22021 cttcgtaagg agttagttta tataaaacta gctgctaagg agcaagacac agatgtattt
    22081 ataaatcacg tgaaaaactt ttatgcttgc atgattcact atacagaaat gccggcgatg
    22141 gagaaaaata tcgatatact gagtcaaacg ctgcgaaata tgaaagaaaa gaatgaaaag
    22201 ctatttttcg aagcttttac gatagatgtt tcgcaggccc tggaagactt ggtaacgcat
    22261 ctagaagcga aagaatttga aaaatgccac tcagtcattc aacactttta tgataagaat
    22321 atctctatct tgttttcaga atcaaaaaac cccgaatgac gatttcgtca cgcggggttt
    22381 ttcttttcgg atgagcttgt cttgccactc atctgatggg ccggaccatg tctggatgtt
    22441 tctgaataaa catacaacat tcggaaaacg gtgaggcatt ttcaaacaag taggcgaatt
    22501 ctttgtcttg ctacttactt ctcaagatat tctagcttac gaataaatga gcgcccgtaa
    22561 cttgcttaaa tagtggccat aaatgatacg atactttatt cgcttattta ccaatgtagt
    22621 gaggataaaa atattgataa acgagcgacg taacgaaatt ccgtcttcct acaactaagt
    22681 tagcgtaaag tccttgacgc ggcgtatact cctcgccttc ctcctgtaag ctaaccgtag
    22741 ctgcttgaca ctaaaatcct tcaccagacg ttttgccggc atatgacaaa gctgagaaaa
    22801 aaatcagctt gtacaccaag tttgtttcat tcgcatcacc ttttatttgt tcgttgtact
    22861 ttatatataa ccgttctaaa taaatgtaaa cgctttattt gtaaaatgat tataaagtca
    22921 cagtttgaat tttaagccag gccttttgtc agaggaaata agccattaaa atatcatcca
    22981 caaattcgcc ttgaataatg aattcttttt ctaggcgtcc ttccagttta aaaccatttt
    23041 tttcatagaa acgaatggct ttttgattga tggatagaac acgcaaggca attttaatga
    23101 aacctttttc gcgtgccact tccttcattt tgtccattaa aagttgacca atgcccgcgc
    23161 gttggtagtc tggatgtaca gcgatatcaa tttctgcgac gtgtttattg gttgcgagtg
    23221 ggataggaga cttataacca agaatcccga ctactttatc atccgccacg acaacaattt
    23281 tggaaccggg tgggctttta agtaaaaatt cggcttcact atcaaaatgg atacttccag
    23341 gtgttgttcc tggcgtccaa actaaatgtt ctaattcaat cattgaagcg gcatcttctc
    23401 gtttagatag tctaatttgc ataatttacc aactttcctt attttctttt tgcgtaagat
    23461 agcgaggttt tccaagtttt ccataaaccg tcattgctgt aaagtagcac atttccttga
    23521 taaagacgaa ctgtgaggaa gaatgcacca acaacgcttg cgagtaaaat agcgagggag
    23581 ctaaagatgc cgatagtcga aacggaaagt aagtccattc gggctagcat catcattggc
    23641 gagaatgtcg gaatatacga accgatgata actaacatat tatctggcgc gttcgctgct
    23701 gcaatggatc cccagtagcc gataattgca agaattgtca ttggataaat aaactgggct
    23761 acagtttcga cattcgggac catcgaacca atcattgctg cgagtaaaat gtacaacaac
    23821 aaacctaaaa taacaaatag taaatttagc acaaggtagt acgctgggaa aacagcaatt
    23881 tgatctaaga cattttgaac catttcggtg tttctgccag caatcaggac gatagctcca
    23941 caaacgatgt aaaacccaat ttgtgttaaa agcataaaaa ttatcgcagt caatttggca
    24001 aataagtgag ttgtcgcaga aacactggac aaaatgactt ccatgatgcg cgtgcctttt
    24061 tctgtagcta tttcagaagc aacaatgttt gcataactca tcacgaaaat aaaaataact
    24121 agtgttaaaa tcaggacagc ggcgctcatc acatcttttt cgtggtttgt taactgattg
    24181 ttggattcta aatcattggt taccgaaaca ggagatgtaa tagattgcaa ttgttcattg
    24241 gtgattttat aagcggccgc tttttcagcg attttggtag ctgtaaggtc ttcggttaaa
    24301 cgtgtaatag tatcttgacc agctgtttct tgcgttgtat aaacggcact tactgaatca
    24361 tcttcctgtg taatcgtgac aaatccgtct atcttaccgt ctttcagagc agactgggcg
    24421 gattttttgt ctttaatgtc cgtatttact ttgaaatgat ttttatcagc agccaaagat
    24481 ttggcaaaaa cagggtcttc tgcaagtacc gcaagctttg taatatcact acttgagtca
    24541 aaatagtcga ccattttcgg aataccagcg atgagcgcgg cgattaaaac gggaaaaagt
    24601 agtgaaatta aaaatgattt tgttttcacg cgtcttttgt aaacttgctt cgtaatcacc
    24661 caaaatttac tcatttagct caccagcctt ccatttgaaa atttcttcga gcgtcggagc
    24721 ttggagacta aacgtttgaa tgaaaccatc ttttgtcaca tattcaaaaa ttttctctgc
    24781 gtcactttca ttttcaattt caagttgcag aaccccgtcg cggtgggttt gaacatttaa
    24841 aacacctggt aaagtagcga gttctgctgc actatggcta gattcaatca aaatacgttt
    24901 acgaccaaaa accgctttta cagattccgt tgttccttgg aggaccacat ttcctttttt
    24961 taacattaat agcgagtcgc aaagttcctc cacattctcc atccgatgac tagaaaaaat
    25021 aatagcagcc cctgaagcgc gtaagtcaaa tacaaacttt ttgagaattt ctgcattgac
    25081 tgggtctaac ccgctgaatg gttcatctaa gataactagt tttggttggt gaataattgt
    25141 acttaaaagc tgaatttttt gttgattgcc tttggatagt gttttgatca agtctgtttt
    25201 tttaccgaca atttcagcgc gttctagcca gctatcaatt tctgccttta ttttttgttt
    25261 tggatatcct tttaattcag caaaaaatat taattgttct tcaattgtga catttggata
    25321 taaaccacgt tcttcgggca aataaccgat aatatttgga tcgattttgc ttacttcttt
    25381 gccgtcccaa gtgatttttc cagaagtagc ttctaaaaaa tgcaaaataa ggcgaaaagt
    25441 agttgtttta ccagcgccat tttgaccaat taatccgagt atttttcctg gttctactcg
    25501 aaacgataaa tcattgacag cgacttttgt tccaaatttt ttcgtaacat tatgtagttc
    25561 aagcgtcaca cgagcacccc tttctaattg ttccctgttt ttattatacg gttttattgg
    25621 aggattgtct tgctaaaagt aaagagctac gacgacgact tttttcacaa actcagccaa
    25681 aaaattgtct agtgtagtgg acataacttg ttgtaaccgt tttcttttat ttgtgtataa
    25741 tagagcgtag agggaggtga tgaaatgctt ctaaccaaat cggagcatgc attaattaac
    25801 ttgttcttaa cgaaaaacga ttttttgaca gcaaagcaat tagctgaaat tctagacgtt
    25861 tcctctaaaa cgatttatcg caagattaaa aacatcaatg agacaactgg aagaaaggat
    25921 atcatcattt ctgaaaaggg gcgtggtttt aagttagatt ataaagctta catacaagct
    25981 aaattagaaa cgacaggtga tatttttggc tatacaccaa cagaaagacg tgaaaaaatc
    26041 ttgctgcaag tattgtttaa atcaccaaag tacttgaatg taacagagct gtatgaagat
    26101 tattatgttg ggtataattc aatcaaaaat gatttctctc ttttaaatca agccatcgag
    26161 aaatatgatt tggctcttga aaaaaggcaa aaagaaatac gggttgttgg cactgaagaa
    26221 aacatccgga ccgccattaa tgaagtgatt aacaacttgg atttatcgac ctatgatgat
    26281 ttgaaaacag aatacagtga tctcaataaa gctgacgttc agtttattgt gcggcaaatg
    26341 gagttgattg agaacaagct gatgattagc attccgtatc cgtatgatat taatatcttt
    26401 tcacatttgt atattttaat caaccgtttc cgtcaagggg aagtagaaga ttttaaagaa
    26461 agtgatgatg cttatatcgt cacaaatgaa aaattgcata cgattgctgt agaagccatt
    26521 gatgcaattg aacaatattt gaaaatgaag ctaccggaga gagagacttt ccatttttta
    26581 caatacttga tttcttctcg ttttaaccat gaaatcgaat tagttccagg taaaatttta
    26641 ccgattgtgg aagaaatgac tgatttttat attgaacaag tggctgctaa aattaatatg
    26701 ccgattaata aaaagcaatt aaagatcgag ctattgagcc atatgaagcc aatggtcaac
    26761 cgaatgaatc atcaaattaa tataaagaat aatttgttaa gcgacatcaa attagagtat
    26821 ggcagactat ttgaaatcat caaagaaact gcaaatgatg tagcaaaaac ctttaaatta
    26881 aacacaattt ctgatgatga agttggctat attaccatat attttgcgaa acacatggaa
    26941 gcgtctcctc tagtcaaacg aattatcatt atgtgttcaa gcggcatcgg gacgtcagaa
    27001 cttttaaaag taaaggttca aaaagctttt ccagatgttg aaatagtaga cgttttatca
    27061 tctacaagat tcaaaaataa cttgcaagac tatcagaata ttgattttat tctaacaaca
    27121 attaatgcag aaagtacaaa agaaatccca tcgttacttg taagtgcgat gtttaccgag
    27181 aaagataaaa taatggtaaa aaaactgatg gaaagtttat aggaggcgaa ttcatggata
    27241 tccaagattt agatattagt aaagtaataa gcccagcact tgtaaattta gacttacaag
    27301 ctacaagtaa attagaagtc attgaagagt taacagattt acttgttgaa actggggcag
    27361 tagcagacaa agatgctttt atagcagatg tattatatcg cgaagaagaa ggcaaaacgg
    27421 gactaggaga aggagtcgct attccacacg ggaagtcggc gagcgttacg agtacatcca
    27481 ttgccgttgg aagaactaaa aaacctgttg agtgggagtc gcttgatgat aaaccagtaa
    27541 atattattat tcttttcgca gtgaaaaatt cagatgctac aacaactcat attaaattac
    27601 ttcaaaaagt agcaatctta cttgcggacg atgaggtgat tggccaattt caaactgtaa
    27661 agacaaaaga agatttaatt aagttgttag ccaaaaatca ggattaggag gagtttggaa
    27721 tgaatattat tggaatagca gcttgtacat cgggaatcgc acatacgtat attgctaaag
    27781 aaaaactaac aaaagcaggg acagcgcttg gtcacaacgt tcatattgaa acacaaggaa
    27841 caattggtat cgaagacgag ctttcagcag aacaagtgaa aaatgccgat gtagttatta
    27901 ttgctgccga tattaaaatt agcggaaagg atcgttttaa aggaaaacga gttgtcgaaa
    27961 ttccaacaga cctagcgatt aaagcaccaa aacaaattat taataaaata gacaaagaaa
    28021 taaataacta gggagtgaac cggtatgatg aaaaaactgc aaatcaaaaa acatgcactt
    28081 acagcgattt cgtatatgtt accgttagtt gttgcctcgg ggttacttat tgccattgga
    28141 aatttaacaa atggacaagt tattgaaaac tacaaagcac cttattcgat tccagatgca
    28201 cttgtctctc tcggtgtgct tggtatggga ctgcttgctc cagttattgc tggtgcgatt
    28261 gcctattcga tagcagatag gccgggaatt gcgccagggt tacttatggg acttatcgcc
    28321 aattcaatcg gtgctggatt tttaggcgga atgcttggag gatacttagt cggttatttt
    28381 gtacttattc ttgtgaaata tttaaaagtg ccaaaatggg cgcaaggttt aatgccaatg
    28441 atgattattc cgcttattag tagtttagtc gtcgggcttc tgatgtactt tgttgtaggg
    28501 gttccaatcg tttgggccac ggaggcgatg acaagcttct tacaaggcat gcaaggcagt
    28561 atgcgctttg ttttcggagc tgtacttgga gctatggcag catttgactt tggtggacct
    28621 gtaaataaag tggcctcctt attcgcagat gggctccttc ttgaaggcgt caaagaacca
    28681 gaagcagtaa aaattcttgc ttcgatggtt ccgccattcg gggtgaccct ttcatgggta
    28741 gtttccaaat taattaaaaa gaaaaaatac acgaagtcag aagaagacaa tatcaaaatt
    28801 gctttcccga tggggatttg tatgattaca gaaggtgtta ttcccattgc agcggttgac
    28861 cccattcgcg ttattatttc ttgtacactt ggtgcggcag tcggcggagg tcttagtatg
    28921 acttggggaa ttggctcacc agttccatca ggcggaatgt ttatcgtccc agcaatgaat
    28981 gaaccactct tattctgttt agcattatta attggtactt gtgtcacagc agccatgtta
    29041 ctcatcttga aacgagaacc tactaaagaa gaagaactca ttgctgacca aggattagaa
    29101 gaggaagatg aagttgatct gtctggaatt aaaatttcat aaggtgagga gattttgaaa
    29161 tgtatgtgtc catgaaaggt atgttagaac gtgcgaacaa ggagcattat gcagtaatgg
    29221 caattaattg ttttaatctg gaaacggctc gtgcagtcat tgatgctgca caagaacttc
    29281 gtgcgccgat tatcattgat ttacttcaag atcatttgac aagtcatcta ggaagtcgct
    29341 ttttgacaaa acccattata aaaatggcag aagaagcgag tgttgaagtg gcaattaatt
    29401 tggatcacgg gcatgatgtg gcgatagtga agcaatgctt agcggatggt ttttctagtg
    29461 tgatgatgga tgcgtctagt tttccttatg aagaaaacgt tgcaattacg aaaaaaatgg
    29521 tcgagtttgc agaagtttat catgctagtg tcgaggcgga agttggtaat attggtgcgg
    29581 tgactggaga taattacacc aatcaagaaa tgtataccga ccccaaagtg gccatcgatt
    29641 ttgctaaacg aacagggatt gacgctttag caatttctta tggttcttcc catggtgatt
    29701 atccagaagg ttttacaccg gctttccagt ttgatattgt cagagaaatc aaatccgcga
    29761 caaacatgcc gctcgttttg cacggaggtt ctggttgcgg ggcggaaaat attcgagaat
    29821 ccgttcgact gggcatcaat aaaatcaatg ttggctccga cttcatgaaa gcacaagtaa
    29881 atcaaataaa aacgaattta aaagaaaatc cggccgttaa ctatgtggac ttaattcatg
    29941 aaacgataaa agccggcaca aaagctgtta aaaattatat tcaactatcc ggttcaaccg
    30001 gaaaatcact ttaaaaggag aaatgaaaat atgttagtaa atatgaaaca attattagaa
    30061 gtagctaagg aaaacaaatt cgcggtggga gcatttaatg ttgcagacag taacttttta
    30121 cgggtggtag tagaagaagc tgaaaaaaac aatgctccag caattattgc agtgcatcca
    30181 acagaattag attttacgaa agatgacttt ttccaatatg ttcttgcaag aattaaaaat
    30241 agtcctgttc catttgttct tcatttggat catggtgaca atatgggaga tgtgatgcga
    30301 gcggtacgtt gtggttttag ttcagtgatg attgatggct ctttgcttcc ttttgaagaa
    30361 aatattcgtg ttacaaagga agttgttgat gtttgtcata aactgggggt ctcagttgaa
    30421 ggtgagctcg ggactatcgg gaaaaccggt aacagtattg aaggcggcgt cagtgagatt
    30481 atctatacaa aacccgaaga agcggaagaa tatattagtc gcacgggtgt agatacgcta
    30541 gctgttgcaa tcgggacagc gcacggaatt tatcctaaag ataaggagcc aaaattacgt
    30601 ctagatatct taaaagaaat aaaagattta gtgaatattc cacttgtact tcacggtggt
    30661 tctgcaaatc cagaagccga aattgctgca gctgtcgaaa ttggaattca aaaagtaaat
    30721 atttccagcg attacaaata cgccttttat aagaaatgtc gtgagattct aagtacaaca
    30781 gaactttggg atgccaacgc aatctaccca gactgtattg atgcggcgaa agaagtggtg
    30841 aaatataaga tggaactttt tgagtctatt ggtcaagttg aaaaatacca acaagcaaaa
    30901 accacagctt ggcgaagtga actaatctaa caaaaaaaac taagagcgca agttggctct
    30961 tagttttttt gtatctttac aagtggtaca ttcatctcta ttaacttttg gagcttctgg
    31021 acatcgttaa ttcgccaagg ctttctttgt gattccaaaa tgccttcttc tcgtaaatgt
    31081 cctagaactt tagacgtgta gcttttagaa gtattagcat gatcagcaag tatttgataa
    31141 gttaaaaatt ctggaagttc tactattttt tcggagatac gtaggccaaa ttcaatcatt
    31201 gtacttaaag aataataaat actttcacgt gaagtcaatt tttcttgata agcgatagtg
    31261 taaaatcttc ttctagtttc cgctaattga tgaagcatga gataatttcg cggatcttcc
    31321 gtctccatca tccccttaaa gaaactgata tcaattttcc accatacaat atctgtaaga
    31381 gcaaccatca ttgtgtgttc aggtatatcc tctgtataaa ctggcaaaaa gggaaatgct
    31441 cctttagaca aaatataaga aaaatcacgc ggtttgttgt catcaaatat tagtttcata
    31501 aaaccttctt ctattatata gatatgtttt cgttgtttat tggatgtgat aattgttttt
    31561 tgtgggagcc gctcttgaat gcagtgctta ttaaaactcg gatttttctt gagcagttta
    31621 agaatattat ctatcgaagc aaattgatct aacgtttctt ttaaatacat accattcccc
    31681 cctatgtcat tagtttcccg caatataagc gcataaaact tattcttcta gtagaatatt
    31741 tttgcgtaaa cataagcggg gaagaataaa aacaggaatt aataactttc acaaataata
    31801 caaaatatcg cgataatcat taaaaaatag aggttattct tctaaaaagg tagttagaaa
    31861 gatactattt tcactaaaat gttgcttgaa atttttggat agaaaagtag agggaatgtg
    31921 cttcgtctta taatagaagt atcaaaagaa acttatacaa taatttataa agtgaataaa
    31981 attcaattgt gacaaaaaag tcaaaaatag ttggttaaag caggaagttt tgtttttttg
    32041 ttgggttcct tttaaaag
//
LOCUS       DASDYK010000020        31325 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.020, whole genome shotgun sequence.
ACCESSION   DASDYK010000020 DASDYK010000000
VERSION     DASDYK010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 31325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31325
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.020"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            63..932
                     /locus_tag="U0308_000966"
     CDS             63..932
                     /locus_tag="U0308_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HEM2315939.1"
                     /translation="MKYRKLSKKKKQKRLIGIAGILLLVILVGVIASVVRQQYLIMTA
                     PEPDPAFHSKEQNFLNELSPRAQEIQEKHGILTSITLAQAILESDWGQSGLAQKGNNL
                     FGVKGKSPQPMVTMTTKEFVDGKWIEINANFRKYKDWNESLDSHAELFLKGTSWNKDK
                     YNGVIAADDYKKAAQELQSAGYATDPDYAEKLINIIEKYDLALYDRIEDKIYYDTKST
                     GFGNVKKDVSGAIWTKPYGLSGALKVEEINYYKREDLKLLREAKTDSGVWYQIAIDTE
                     PIGWVKQELIDKK"
     gene            1229..2215
                     /locus_tag="U0308_000967"
     CDS             1229..2215
                     /locus_tag="U0308_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HEM2315940.1"
                     /translation="MTIGLGITITLFAVPIHSQAAGLEDGLTSKQEKFINEIAPHAQK
                     VQKEHGILASITISQAILESNWGESKLAKDGNNLFGIKGSYQGASIKLPTKEHNGVVW
                     VGTDAVFRAYPGWYESMNDHALLFVNGPSWNPHLYGGLIKEYDFEKAAIALGKTGYSS
                     DPEYAAKLIELIKKANLNKYDTVYSERVSDKAIKAAGEVAVKDNCYVWSAPGGTKGAK
                     PIVSTTKYFGRQVSINQEVKVTDSNISWYHIHQNGESIGWIESTSIKDFYQLEDYAPT
                     VDALLKTDDNNRLVINMDIDTSELHKTKLAKADTKEKTAFNLPLLNVQSIIW"
     gene            2327..3406
                     /locus_tag="U0308_000968"
     CDS             2327..3406
                     /locus_tag="U0308_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HEM2315941.1"
                     /translation="MDEQLKMLKALTDAKGIPGNERAVRNVFREYIEPLADSFETDGL
                     GSAVAKKVGAEDGPKIMIAGHLDEVGFMVTQIDDKGFIKFQTVGGWVSQVMLAQKVTI
                     VTRSGEEITGVIGSKPPHVMTAAERQKSFDIKDMFIDVGAVDKAEVESYGIRPGDMIV
                     PAFDFTVMKNEKFLLAKAWDNRIGLAIAIEVLKNLQKEQHPNIVYGVGTVQEEVGLRG
                     AKTAAHFVQPDIGFAVDVGIAGDTPGVTDKEAMSKMGEGPQIVIYDASMVAHAGLRDF
                     VTDVADELSIPYQFEAIPMGGTDSGSIHLTGNGIPSLSITIATRYIHSHSSMLHRDDF
                     ENAVKLITEVVKRLDKEKVTEIRLG"
     gene            3432..4190
                     /locus_tag="U0308_000969"
     CDS             3432..4190
                     /locus_tag="U0308_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEM2315942.1"
                     /translation="MEQIQSVKNDRVKTWKKLQTRKGRDKTGTYLVEGFHLVEEALRQ
                     DGLVLELLVSSGVSVPEEWLKGDYDVFEISTEISHLISETMTEQGVFAVVATSEPDMM
                     LLYGKKLLLVDAVQDPGNVGTLIRTADAAGYDCVVLGKGSADLYNPKVIRSTQGSHFH
                     IPVIQADLFDWIANLEEEGVPVIGAVLDDQAKSLNDMTKRDTLALMVGNEGNGISPEL
                     QDRLSEKVYIPIYGDSESLNVAVAAGILLYGLRK"
     gene            complement(4235..4594)
                     /locus_tag="U0308_000970"
     CDS             complement(4235..4594)
                     /locus_tag="U0308_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315943.1"
                     /translation="MPSIRYIVKTDVAETFEIIKAGQVGSNIVFSEVRTFDFGELATL
                     ACEKFYFRSSNRAALFVTINNFHGETEVTIISTGSSNGFFTGIDWGAAFDYMHSVVAD
                     LKRVAIREVAIEKQEEI"
     gene            4751..5074
                     /locus_tag="U0308_000971"
     CDS             4751..5074
                     /locus_tag="U0308_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2315944.1"
                     /translation="MTDAHTVCPKFESAFQLLGKRWTGLIINVLLTGPKRFKQVAAEI
                     PQMSDRVLAERLKELEEMDICLRQVYPETPVRIEYELTEKGKALQEVMLEVQCWADKW
                     VEVPN"
     misc_binding    5167..5396
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            5442..6494
                     /gene="pheS"
                     /locus_tag="U0308_000972"
     CDS             5442..6494
                     /gene="pheS"
                     /locus_tag="U0308_000972"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEM2315945.1"
                     /translation="MLEQLQTLKNEAETQINEASDLKTLNDLRVKYLGKKGPMTEIMK
                     QMGKLSAEERPKMGSLANEVRTALTEAISSKQQILETEAINEKLKSETIDVTLPGTAP
                     SIGTKHLLTQVIEEMEDMFIGMGYEIAEGPEVELDYYNFEALNLPKDHPARDMQDSFY
                     ITENTLLRTQTSPVQARTMEKHDFSKGPIKVICPGKVYRRDNDDATHSHQFTQIEGLV
                     VGENITFADLKGTLTVLAKTMFGEEREIRLRPSFFPFTEPSVEMDISCFKCGGKGCRV
                     CKGTGWIEILGSGMVHPNVLEMSGIDSTRYSGFAFGLGPERVAMLKYAVDDIRHLYTN
                     DLRFTKQFQSTETGEI"
     gene            6494..8902
                     /locus_tag="U0308_000973"
     CDS             6494..8902
                     /locus_tag="U0308_000973"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEM2315946.1"
                     /translation="MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLK
                     NVVVGEVLSCERHPDAEKLNKCLVQTDETEPVQIICGAPNVAAGQKVIVAKVGARLPG
                     GLKIKRAKLRGEVSEGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVSAITLLGL
                     DDAILDMAITPNRADALSMNGVAHEVGAIIHQKPAQPTEPDVSEKGKADDFISVEVEN
                     PAETPYYAIKMVENIEIKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFD
                     YDKIGSKKIVVRSAKEQEEITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVT
                     ENTTTVALEGAIFSSSSIGKASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAEL
                     SGGTLVGGVVEVDNREKAVNKIETSLTRINRILGTAITLAEIETIFDRLGFVLEVKND
                     TLIIEVPTRRWDITIEADILEEVARIYGYDEIPVTLPATSTTGGLSDSQKARRVMRAY
                     LEGAGLNQALTYSLTSKKDATRLALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASY
                     NIARKNMDVALYEMGTVFYATEGDNLPIEQEHLAGLITGNWHTVDWQKTPKPVDFFVL
                     KGIVEGLVNKLGIKSELHWKQTEKEELHPGRTASLILEGQEIGYLGALHPAVEANYDL
                     KETYVFEINVAALLDATKEKVVYHPIPRYPEMTRDLALLVDKNTDHATISQVIQEHGG
                     KLLVDIELFDIFEGESLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVIEALQEKLH
                     AIIR"
     gene            9063..9764
                     /locus_tag="U0308_000974"
     CDS             9063..9764
                     /locus_tag="U0308_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2315947.1"
                     /translation="MTYVEMKDVSKYYQMGENVVTANDKITFGIKKGEFVVIVGPSGA
                     GKSTVLNILGGMDSASEGKIMVDGQDIAQYNAKQLTKYRRTDVGFVFQFYNLVPNLTA
                     KENVELAAQIAPNALDAETVLTQVGLSHRLDNFPAQLSGGEQQRVAIARALAKAPKLL
                     LCDEPTGALDYDTGKSVLKLLQETCRNTGTTVIVITHNTAITPIADRIIEINNAKVRS
                     IKENPEPMSIDDLEW"
     gene            9778..13188
                     /locus_tag="U0308_000975"
     CDS             9778..13188
                     /locus_tag="U0308_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEM2315948.1"
                     /translation="MKRSALWKDIYREIWRSKSRFISIFMLIMLGVAFFSGLKATGPD
                     MLLTADNYFNKYELANFNVQSTYGLDETDKEALEDISGVAQVELGYTADTLMKDKNIV
                     TKLFSNSESDNLNQYKIASGRLPEKSGEIALDDNDLVHKNVKIGDEVTFVKSDGNKLT
                     NTLKKSTYKVVGFVSSPAYIQKSERGSSTVGKGKTDAFGVIPEQDFDLPEYTIANLTF
                     NNLAAKQAFSDEYVSTEEKDKKSVEKALADQPEKRLNKIKTKEQKKLDDATAEINKRK
                     AELQENEAKLANAKAQLEEGFSEYNAAKASYDAKIKHGEAEIANGEAERRSAKKQLDT
                     AKTQIDQGETALSQAEMELEEGRAAWEDANNLLNTANGYLRSAKSTLENALKQPDLTD
                     FELDRNSLTNSFQMLASELDLSSAERAEYENAMNQLLDDYENGNISDAEIREALNAAL
                     AQVGNAENEYQSARATLDAEKQKIEQGEQTLAAKKQELQQAKTAYQEGLAKYQAGLEK
                     ISQAKQQLADGKETGSTELQSALAKLNVGQAEYEKNLALFEKEKAKAEGKLASAEKEV
                     KIGQEKLDALKLPKYYVLDRNDNPGYSEYKENADRLTSLSTAFPIFFFLIAALVCLTT
                     MTRMVEEQRTQIGTLKAFGYSNGSIILKYLVYGSTASIIGSVLGILIGFQFFPNIIFN
                     AYKSMYEMPPVDIGFYWSYSLLSLFVALFCTTFTAYVACRAELRANAATLMRPKAPKI
                     GKRIFLERISFIWKRMNFTSKVTARNLFRYKQRMLMTVLGVAGCTALILTGFGLRNSI
                     SDIAKMQYGQIMKYDAAIYQDMSAPPAAKETFDEIMNDSNIKSKLAMSQTNIETVKSG
                     QSAQTTSIIVPKNLNELPDYIVLRDRASHTTEKLTDDGAIITEKLAKLFDVKPGDTIT
                     VKNAENDKFQIKVSAITENYAMHYIYMTKSYYQQVFKEKPTYNLDLLMLKDTSEKVES
                     NFAEKLTDSKAILNVTFSNNVSSLLNETLDSLNIVIVVLITSAALLAFVVLYNLTNIN
                     VSERIRELSTIKVLGFYPKEVTMYVYRENIILTLMGIAAGFVLGFFLHRFIITTAEVD
                     QMMFSPAISWTSYLFSGILTLVFATVVMVVMHIKLKRIDMIEALKSVE"
     gene            13286..13738
                     /locus_tag="U0308_000976"
     CDS             13286..13738
                     /locus_tag="U0308_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2315949.1"
                     /translation="MERQKVKQLIKSYQQTYIFAMNQIHQAISEISASTVDLSIEQFF
                     VLREIATYDGISATELAATLAVNKSAITPKLKKLEEKGYIRRERNQQDKRAVVLTISE
                     KGNNVYEECEKQLELLVNEWLEILGEKDSEQFFELFQKITKSVVEPRQ"
     gene            13754..16954
                     /locus_tag="U0308_000977"
     CDS             13754..16954
                     /locus_tag="U0308_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEM2315950.1"
                     /translation="MKWIMKLRWAILAFWLAAAVVLMIIAPPMADLVREKGELKLPDG
                     YPSSLATEMQKKHNPDDKGSAYIAVYTADHKLTGTELNDIQDSLNSIEKDKDELHVTN
                     VLSSFNQPELKDKFLSKDGKTMVASLTVDDTDASVKSIRNALDKKMDVKGVDTYLTGN
                     KLIQEDVVQGSEDGLHKTEGITVVFILVVLFLVFRSAVAPFIPLVTVGISYLVAQSTV
                     AFLIDIFNFPVSTYTQIFMVCIMFGIGTDYCILLMSRFKEEMGAGLNPREAVHATYRT
                     AGKTVIYSGVAVLVAFTSLYFVQFDLYRSAVAVGVGIVVLLAALYTLVPFFMSTLGTH
                     LFWPLNKNISHKENKIWGAAGKFTFARPWIALLIVAAITLPPILLHTGTESFNSLDEI
                     SDKYPSKKGFEIVSDSFGAGQVAPTQIFIENDDNMRTTDYIAQIEKISDDLSHLKGID
                     MVMSASRPAGKRVDDIYIKNQAGQVNDGVGQATDGVGEVKKGLDSASSELKKSEPALD
                     KAVAGVSDLQKGTVATQEGINQLQTALAQIQTGIESGATGAGDLKQGVAEAKSQLATL
                     QNGEAQIQAGYVEIQKNLQNVADQLKGFEDPSSQAIDTSKLEEQFKKIGASFQAFAAA
                     HPEVRNDPRFQKLAADIQGLETAGNELKTSAGQQMAALQAKMKELNQGIQQLATAMNQ
                     LNEQSKQISDGLSAFSTGLGQIETGLDQLEKGLNQAADGQGQVVSKMPEISNALTQIA
                     AGQGALKDGFAGISGQMGQLTDGLTSGADGLGKVESGLNTANGLIDDWSKVPYASSGI
                     YVPDALLKNADFQKVLDQYISSDGKLATINVILTKNPYSNEAMDSIDDINEQLSASMK
                     GTKLENAKIGIGGMTSANYDTRDMSTADYHLVLVIVLASVFVTLVIVLRSLVMPIYLI
                     ASLVLTYFAALGFAEIIFMRILGYSGLTWATPFFGFVVLVALGIDYSIFLMSRFNEYN
                     GLSVRDRMIKAMKNMGGVIFSAVIILGGTFAAMMPAGVLSLLEIATVVLIGLVLYAVV
                     ILPLFVPVMVKLFGRGNWWPFITRKGDHQENVPPKK"
     gene            17058..17732
                     /locus_tag="U0308_000978"
     CDS             17058..17732
                     /locus_tag="U0308_000978"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEM2315951.1"
                     /translation="MIKLGNDWDELLKDEFNQPYYLTLRQFLKKEYQTKKVFPDMYDI
                     FNALKYTACKDVKVVILGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDLNC
                     EIPNNGYLIRWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNRIIEIINQKEEPVVF
                     LLWGNNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPID
                     WQIPSI"
     gene            complement(17770..18696)
                     /locus_tag="U0308_000979"
     CDS             complement(17770..18696)
                     /locus_tag="U0308_000979"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HIII"
                     /protein_id="HEM2315952.1"
                     /translation="MANTVILVDQPTLEKMKQTYLPFSNPKLPPGAVFAAKKTGVSIT
                     GYKSRKVMFQGVNGEVEAKKWVATLPESKTKAPSVSKGILPANFASKNVIGSDEVGTG
                     DFFGPITVCAAYVDAEMMPLLKELGVKDSKAMKDPEICRIAEKIMPLVPHSVLLCPNP
                     KYNELQKRGMNQGQMKALLHNRAIENVLKKLAPVKPEAILIDQFAEKNTYYRYLAKEP
                     SIIREDVFFATKAEGLHLSVAAASIIARYKFVQAFDAMSKEVGIPLPKGAGPHVDAVA
                     AEIIERFGLETLAKYTKQHFANTEKALKMVKK"
     gene            18850..19113
                     /gene="zapA"
                     /locus_tag="U0308_000980"
     CDS             18850..19113
                     /gene="zapA"
                     /locus_tag="U0308_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEM2315953.1"
                     /translation="MANERNKVVTTIYGREYTIVGVETTDHLRKVAREVDEKMHEIGS
                     QNHALDSGRLAVLTAVNATHDYLKLEQKYLELEQELARIKGRD"
     gene            19113..19655
                     /locus_tag="U0308_000981"
     CDS             19113..19655
                     /locus_tag="U0308_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEM2315954.1"
                     /translation="MILNAIILILLVCGFFAGFRTGLIKQLILLLGYILAFFISYTYY
                     EDLAPHLTFIPYPGSDTADGLSIILQELRTETAYYNVLGFAIIFIVAIIVVHMLASLV
                     GGLTKIPVLRQINGLLAAVFGVVKSYLIIFVVLFIMAIYPANWSENLIDSSTVAQWML
                     ENTPILSEQFYDWMTDILPK"
     gene            19747..21459
                     /gene="polX"
                     /locus_tag="U0308_000982"
     CDS             19747..21459
                     /gene="polX"
                     /locus_tag="U0308_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HEM2315955.1"
                     /translation="MATNKKEIIRLLEEIATYMELKGENSFKISAFRKAAQAIELDSR
                     SLSEIDDFTKISGIGKTTGEIIQRYLDSGECPELEALKKEVPAGLVPLLDVPGLGGKK
                     LSRLYHELGVVDKDTLLQEAENGHIEALKGFGKKSAEKMAEAVREMGERPDRYPLNDV
                     LPIIQKVEAYLADIAPIETFAQAGSLRRLRETVKDLDYVIATEKPEEVQKALLAFPLI
                     TDVIGAGETKVSAVLEDNITISVDFRLVEKKAFATTLHHFTGSKDHNIKMRQLAKQSN
                     EKISEYGVEQEDGSVRHFESEKAFFEHFKIPFLPPEVRRDGTEIERVTKDTKFLELSD
                     IRGDLHMHTTWSDGAYAIPEMIEACIAKGYEYMVITDHGKFLRVANGLDEKRLLEQQA
                     EIKKIAANYPEIDVYSGVEMDILADGSLDFDDETLKQLDFVIASIHSSFQQSEEEIMK
                     RLKTACENPYVRLIAHPTGRIVVKRKPYHVNMKELIQLAKNTGTALELNANPQRLDLN
                     REHLEMAHAAGVPIAINTDAHDTKHLDFMSIGVRAATKAWLDKSAILNTKTAAEFKHF
                     LQNK"
     gene            21482..23839
                     /locus_tag="U0308_000983"
     CDS             21482..23839
                     /locus_tag="U0308_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HEM2315956.1"
                     /translation="MEKKVEAILEFDKIKKQLTEFASSSLGEQAILELAPATDFQVVQ
                     KTQLETEEGAKIIRLRGSAPITGLTDVFAHLKRLEIGGDLNGLEIYQIGSNLRVSRQM
                     KNFMNDLLEIGVELPLLGALSDELLVLKEVEEDIAISVDESGKVLDTASEALSTIRRT
                     LRRTEDRVREKLESYLRDRNASKMLSDAVITIRNDRYVIPVKQEYKGHYGGIVHDQSA
                     SGQTLFIEPQSVVDLNNERKALQAKEKQEIERILAEISASLAAWINEIHHNTFILGRF
                     DFIFAKARFGKAMKAVTPHLSDAGVVHLIAARHPLLDAAKVVANDIYLGEDFTTIVIT
                     GPNTGGKTITLKTLGLLTLMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTF
                     SSHMTNIVSILGNVNQKSLILYDELGAGTDPQEGAALAIAILDASHAKGASVVATTHY
                     PELKAYGYNRVHATNASVEFNVETLSPTYKLLIGVPGRSNAFDISRRLGLSENIITEA
                     RSLVDTESADLNDMISSLEEKRNLAETEYEEARELARGADNLLKDLQKEISNYYQQKD
                     KLIEQASEKAATIVEKAEAEAEEIIHELRTMQLNGAAGIKEHELIDAKTRLGNAKPKT
                     INKTIPQAPKQKPHVFQEGDNVRVLSLGQKGTLLNKISDKEWNVQIGIIKMKIKTTDL
                     EYIQPEKPKKQRIITSVHSSGSPAKSELDLRGERYEDALQKVDKYLDEALLAGYPQVA
                     IIHGKGTGALRTGVTEYLKNHRMVKSIRFGAAAEGGNGVTIVEFK"
     gene            23920..24231
                     /gene="trxA"
                     /locus_tag="U0308_000984"
     CDS             23920..24231
                     /gene="trxA"
                     /locus_tag="U0308_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEM2315957.1"
                     /translation="MVKEITDATFEQETSEGLVLTDFWATWCGPCRMVAPVLEEIQEE
                     RGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKY
                     V"
     gene            24307..26118
                     /gene="uvrC"
                     /locus_tag="U0308_000985"
     CDS             24307..26118
                     /gene="uvrC"
                     /locus_tag="U0308_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEM2315958.1"
                     /translation="MSSEHIQNKLALLPDQPGCYLMKDRQGTIIYVGKAKILKNRVRS
                     YFSGTHDSKTQRLVQEIVDFEYIVTSSNVEALLLEINLIKKHDPRFNIRLKDDKTYPF
                     IKITNERHPRLIITRQVKKDKGKYFGPYPNVYAANEVKRILDRLYPLRKCSTLPNKVC
                     LYYHLGQCLAPCVFDVEASKYKEMQDEIVAFLNGGYKTVKNDLMKKMQEAAENMEFEK
                     AGEFRDQINAIETTMEKQKMTMNDFVDRDVFGYAIDKGWMCVQVFFIRQGKLIERDVS
                     QFPFYNDADEDFLTFIGQFYQKANHIPPKEIYLPDDVDSEAVQAVVPDTKIIVPQRGN
                     KKDLVKLAYKNAKIALNEKFMLLERNEERTVGAVERLGEAMGIPTPSRVEAFDNSNIH
                     GTDPVSAMVTFLDGKPSKNDYRKYKIKTVEGPDDYATMREVIRRRYWRVLKEELPMPD
                     LILIDGGKGQIDSAKDVLTNELGLDIPVAGLAKDDKHRTSQLLFGDLLEIVPLERNSQ
                     EFYLLQRMQDEVHRFAITFHRQLRSKTGFQSILDGIPGVGPGRKKKLLKHFGSMKKLK
                     EASVEEIKEAGVPLNVAEEVHKHITAFNEKAKNTEQK"
     gene            26299..27513
                     /locus_tag="U0308_000986"
     CDS             26299..27513
                     /locus_tag="U0308_000986"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEM2315959.1"
                     /translation="MGLVVLKFGGTSVSTVDKIGKTADQAIYEKKQGNKVIVVVSAMG
                     KSTDKLVAMAEEISEAPDKREMDMLLSTGEQITIALLAMTLKEKGHDAISYTGWQAGI
                     ETEAVHSNARIADIDSARIESALDAGQIVVVAGFQGFTTDGEITTLGRGGSDTTAVAI
                     ASALNAVKCAICTDVVGVFTTDPRYVKKAQKLEQITYDEMLELANLGAGVLHPRSVEY
                     AKNFRIPLEVRASHEQVPGTMIEEDLTMENTKVVRGIAFEDQITRVTIHWKQKEAMRV
                     SKVFTKLAENNIDVDIIIQGITGLGHGNLSFTIKTSALLATLAVLEESKELLQIEKLE
                     SEQDLAKVSIVGSGMVSNPGVAAQMFEALTENNIPIKMISTSEIKVSTVVPARKMVEA
                     AQVLHDQFELDK"
     gene            complement(27569..28063)
                     /locus_tag="U0308_000987"
     CDS             complement(27569..28063)
                     /locus_tag="U0308_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YslB family protein"
                     /protein_id="HEM2315960.1"
                     /translation="MVIMVYESGVSEMTENEQNKNEEKALVPSFGLDLLRDYLIPELL
                     GDEAPHIMYWAGKDLARKFPLASLEEVAEFFEEASWGNFSILKEKKDEMRLLLEGETV
                     AARFRTQEEPTFKLEAGFIAEQLQSQKKLYTESYDEIDKRKKQVTIIVKWDRKETIDN
                     EERY"
     gene            28211..29011
                     /gene="racE"
                     /locus_tag="U0308_000988"
     CDS             28211..29011
                     /gene="racE"
                     /locus_tag="U0308_000988"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEM2315961.1"
                     /translation="MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPR
                     DKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAA
                     LKATRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA
                     KKVVAESLLPLKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALL
                     DYHNLLDATDEEIEHRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLGK"
     gene            29024..29770
                     /gene="rph"
                     /locus_tag="U0308_000989"
     CDS             29024..29770
                     /gene="rph"
                     /locus_tag="U0308_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEM2315962.1"
                     /translation="MRVDGRESNALRNIEVTPDYLMHPEGSVLIASGNTKVICSASVE
                     TKVPPFMRGEGRGWISAEYSMLPRATNTRNIRESSKGKVTGRTMEIQRLIGRALRAVV
                     DLDALGERTIWLDCDVIQADGGTRTASITGAFIAMVMAIAKLDEAVPFAKFPVKDFLA
                     ATSVGVLEEGGTVLDLNYVEDSAAQVDMNIIMTGSGAFVELQGTGEEATFSETELAEL
                     IALGKKGISELIEIQKETLGDKVTARIKGE"
     gene            29774..30385
                     /locus_tag="U0308_000990"
     CDS             29774..30385
                     /locus_tag="U0308_000990"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HEM2315963.1"
                     /translation="MSKIIIATANKGKAKEFEKIFAKFNIEVATLADFPEIGEIEETG
                     TTFAENAALKAETVASVLNQTVIADDSGLIVDALDGAPGVYSARYAGIAHDDAKNNEK
                     LLKNLEGVEPDKRTARFHCTLAVATPSEKTSFYTGEVEGVIAEQLCGTNGFGYDPLFF
                     LPEFGLTMAEIPAEKKNEISHRANAIKQLEKDLAEVVEKVTKK"
     gene            30422..30946
                     /locus_tag="U0308_000991"
     CDS             30422..30946
                     /locus_tag="U0308_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEM2315964.1"
                     /translation="MKLLVVSDSHSERDCLIHLKEKYENTVDAMIHCGDSELEADDPA
                     IQGFHTVRGNCDFGGGFPNDWVGEVDGYRIFTTHGHLYNIKMTLMNLRYRARELNADF
                     AFFGHSHELGVDMLDDTIILNPGSISLPRGRIRVKTYALIDSTPEGIQVRFMDRDDNE
                     LTDLTQTFPLTKHN"
     gene            31057..31130
                     /locus_tag="U0308_000992"
     tRNA            31057..31130
                     /locus_tag="U0308_000992"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:31091..31093,aa:Arg,seq:tct)
BASE COUNT        10741 a         5808 c         6419 g         8357 t
ORIGIN      
        1 taatgaaagt aacgtattct agtaccatca agggattcgt agacagaaag gcgtgacgac
       61 atctgaaata taggaaatta tctaaaaaga agaaacaaaa gaggctaatt ggaatagcgg
      121 gaattttact tctagtaatt ctagtaggtg tcattgcatc agttgttaga cagcaatacc
      181 taattatgac tgcaccagaa ccggatccag catttcattc caaagaacaa aactttttaa
      241 atgaactttc gccacgtgca caagaaattc aagaaaagca cggtatctta acgagtatta
      301 cactcgctca agccattctc gaatcagact ggggccaaag cggtttagcg caaaaaggta
      361 acaatctatt tggtgtcaaa ggaaaatcgc cacaaccaat ggtgacgatg acaacgaaag
      421 aatttgttga tggtaaatgg attgaaatta atgctaattt ccgaaaatat aaagactgga
      481 atgagtcact cgattcgcac gctgaacttt ttttgaaggg cacttcttgg aataaagata
      541 aatataatgg agtaattgct gcagatgatt ataaaaaagc cgcgcaagaa ttacaatcag
      601 ctggctatgc aactgaccca gattatgcgg agaaattaat caatattatc gaaaaatatg
      661 atttagcatt atacgaccga attgaagata aaatctatta tgatacaaaa tcaactggct
      721 tcggcaatgt gaaaaaagat gtatctggcg caatttggac gaaaccatat ggactttccg
      781 gcgcgctaaa agtagaagaa attaactact ataaacgtga agatttgaaa cttttacgtg
      841 aagcaaagac cgatagcggt gtttggtatc aaattgcaat agataccgag ccgattggtt
      901 gggtgaaaca agaattaatc gataaaaagt aaaaaataac cgaaaaagag caaaatgact
      961 tgtcttattt ataggcataa agtccttttt aagctctttt tcttttttat tttcatcaat
     1021 acgaactttg agaaagggct atatcaaagc tacgagcgta tattgtaaca taagtaatgt
     1081 aaaagtaatg tgtattacaa gaatgttttg atagaatgaa gtggttgttt taaagaacac
     1141 tagtttccag tttttcaaaa gctggaagga taaatcaaag aaggatgtgc aataaatcat
     1201 tatgttacag ctcgcaaaga agcatttggt gacaattgga cttggaatta caattacatt
     1261 atttgcagta ccaatccact cccaagctgc tggtctagag gacggcttga cttccaagca
     1321 agagaagttt attaatgaga ttgcgccgca tgctcaaaaa gtgcaaaaag aacatggtat
     1381 tttagctagt attacgattt cgcaagcaat cctagagtcc aattggggcg aaagtaaatt
     1441 agcaaaagat ggcaataatt tattcggaat taaaggttcc tatcaaggag cttctattaa
     1501 attacctacc aaagaacata atggcgttgt ttgggttgga acagatgctg ttttccgtgc
     1561 gtacccaggt tggtatgaat caatgaatga ccacgcactt ttatttgtca atggaccgtc
     1621 ttggaaccct catttatacg gaggactaat caaagaatat gactttgaaa aggcagctat
     1681 tgcccttgga aaaacaggct attcatctga tccagagtat gcagcgaaat taattgaact
     1741 gatcaaaaaa gcaaatttaa ataaatacga taccgtttat agcgaacgtg tatcagacaa
     1801 agcaattaag gctgctggag aagtagctgt caaagataat tgctatgttt ggtctgctcc
     1861 gggtggcaca aaaggtgcga aacctatcgt cagcactacc aaatactttg gccgtcaagt
     1921 ttctattaat caagaagtaa aagtaacaga ttccaatatt tcttggtacc atatccatca
     1981 aaatggagaa tccatcggtt ggattgaaag tacatcgatt aaagacttct atcaattaga
     2041 agactatgcg ccaacagtag atgcattact aaaaacagat gacaacaatc gtttagtaat
     2101 caatatggat atcgatacat ctgagctaca caaaacaaaa ctagcaaagg cagataccaa
     2161 agagaaaact gcctttaatt tacctttact gaacgttcaa tccatcatct ggtaataacc
     2221 ttgcaaaaaa agctgaatag attactcggc tttttttgcg ttttcaaagg atttttagaa
     2281 agaaactgtt ataatgaaaa tggagtttat aaggagggtt atttatatgg atgaacaatt
     2341 aaagatgtta aaagcattaa cagatgcaaa aggtattccc ggtaacgaac gtgcagtgag
     2401 aaatgtgttc cgcgaataca tcgaaccgct agcggatagt tttgaaacag atggcttagg
     2461 aagtgctgtt gcaaaaaaag tcggagcaga agatggacct aaaattatga ttgctggcca
     2521 tttagatgaa gttggcttta tggtaacgca aattgacgat aaaggtttta tcaaatttca
     2581 aactgtgggc ggctgggttt cccaagtaat gctcgcacaa aaagtaacta tcgtgacgcg
     2641 ctctggcgaa gaaatcacag gtgttatcgg ttctaaacca ccacatgtga tgacagcagc
     2701 agaacgccaa aaatcattcg atattaaaga catgtttatt gatgtcggtg cagtagataa
     2761 agctgaagtg gagagctatg gcattcgtcc aggcgacatg attgtacctg cttttgactt
     2821 taccgtaatg aaaaacgaaa aattcttact tgcaaaagca tgggataacc gtattggcct
     2881 tgcaattgcg attgaagtac ttaaaaactt acaaaaagaa caacatccaa atatcgttta
     2941 cggtgtagga actgttcaag aagaagttgg tttacgtggt gccaaaacag ctgcgcattt
     3001 cgttcaacca gatattggtt ttgccgttga cgttggtatc gcaggagata caccaggcgt
     3061 tacagacaaa gaagcaatga gcaaaatggg tgagggtcca caaatcgtca tttacgatgc
     3121 atctatggta gcgcatgccg gacttcgtga ttttgtcaca gatgtagcgg atgaactatc
     3181 tatcccttac caatttgaag caatcccaat gggcggtaca gactcaggtt ccatccactt
     3241 aactggaaac ggaatcccgt ctctatccat taccattgca acacgctaca ttcattctca
     3301 ttcctcgatg ctacaccgtg atgattttga aaatgcagta aaactaatta ccgaagtagt
     3361 caaacgttta gataaagaaa aagtaacaga aattcgctta ggttgagttt cgagaaaaga
     3421 ggacaacttt tatggaacag attcaatcag taaaaaacga ccgtgtcaaa acatggaaaa
     3481 aactacaaac gagaaaaggc cgcgataaaa ccgggactta tttggtggaa ggctttcatt
     3541 tagtggaaga agcattgcgt caagatggtt tagtactgga gctgcttgtt tcaagtggtg
     3601 tttctgttcc ggaagagtgg ttaaaaggcg attacgatgt atttgaaatt agtacagaaa
     3661 tcagccactt aattagcgaa acaatgacag agcaaggtgt ttttgcagta gtcgcaacat
     3721 ctgaaccaga tatgatgctt ttatatggga aaaaattatt gctagtagat gcagtgcaag
     3781 atccaggcaa cgtaggtacg ttaattcgta cggctgatgc tgctggatat gattgtgtcg
     3841 tacttggcaa gggaagtgca gatctttata atcctaaagt aattcgtagt acgcaaggta
     3901 gtcatttcca tattcccgtt attcaagcag atttatttga ttggattgcg aatttagaag
     3961 aagagggcgt tccagttatt ggcgcagttc ttgatgacca agcgaaatca ttaaacgaca
     4021 tgacaaaacg cgacacttta gcgttgatgg tcggaaatga aggtaatggc atttctcctg
     4081 aattacaaga tcgtctttct gaaaaagtat atattccaat ttatggtgac agtgaatcat
     4141 tgaatgtcgc agttgctgct ggaattctac tttacggctt aagaaaataa agaaaaagtg
     4201 gtggctaagt tgttttgact tagtcaccac ttttttagat ttcttcttgt ttttcaatag
     4261 ctacttcccg aatagcaacg cgttttaaat cggctacaac actgtgcata taatcaaatg
     4321 ccgcacccca gtcaattcca gtaaaaaagc catttgaact accagtggag ataatcgtta
     4381 cttctgtttc tccgtgaaaa ttattaatcg taacaaaaag tgctgcacga ttcgacgagc
     4441 ggaaataaaa cttttcgcaa gcaagtgttg caagctctcc aaaatcaaaa gttctaactt
     4501 cagaaaacac gatattcgat cccacttgac cagctttaat tatttcgaaa gtttctgcaa
     4561 cgtccgtttt aacaatatag cgaatggatg gcatatcagt acctccttct ataaaactat
     4621 cttatatata gtttaagaca gaagaagaat ttggtcaatc gggccacaac ttactaaata
     4681 taagcaacat aatatttatt agttactttc tgatgataga tatggtacaa taacgttaga
     4741 ggtgagaatt atgactgatg cacatacagt atgtccgaag tttgaatcgg cgttccaatt
     4801 actaggtaaa cgctggactg gacttatcat caatgtctta ctgactggtc caaaaaggtt
     4861 taaacaagtc gccgctgaga tcccgcaaat gagtgatcgg gtgcttgcag aacgtttgaa
     4921 ggaacttgag gaaatggata tttgcttaag acaagtttat ccagaaactc ctgtacgcat
     4981 tgaatatgaa ttaaccgaaa aagggaaagc actccaagaa gtaatgcttg aagtccagtg
     5041 ctgggcggat aaatgggtgg aagtacctaa ttaaaaaaga aataatctct ccaaccaata
     5101 tggagagatt attttttagc ttgaatcttt cctagaacca tactataata gaaactatct
     5161 aaataactaa agacaatgaa agagccaagt agcatagtga gtctgtatag ggagaagtgg
     5221 tcatagactg aaagccactt tacaaacgaa tttgtgaaca tttcacctct ggagtcgccc
     5281 cccgagaagc actttatgtg tgaaggtggt ccggttacta agccgttatc gaattttgag
     5341 tgggaacaat tttttgttct tattagggtg gtaccgcgag aagtctcgtc cctttgtgga
     5401 tagagctttt ttattttgtc taaaaagaag gagtgaacgg tatgttagaa cagttacaga
     5461 cgctgaaaaa tgaagcagaa acgcaaatta acgaagcatc agacttaaaa acattaaacg
     5521 acttacgggt aaaatacctt ggtaaaaaag gcccgatgac cgaaatcatg aaacaaatgg
     5581 ggaaactttc cgcagaagaa cgaccaaaaa tgggttcact tgcgaatgaa gtaagaaccg
     5641 cattaacaga agcaatttca agcaaacaac aaattttaga aacagaagca atcaatgaaa
     5701 aactaaaatc agaaaccatt gacgttacat taccaggtac tgctccgagt attggaacaa
     5761 aacacttgct aacacaagta attgaagaaa tggaagatat gttcattggg atgggttacg
     5821 aaattgcaga agggccagaa gtagaactag attactacaa cttcgaagcg ttaaatttac
     5881 caaaagatca cccagctcgt gatatgcaag atagcttcta tattacagaa aatactttac
     5941 tacgtaccca aacttcacct gtacaagcaa gaacaatgga aaaacatgac ttctctaaag
     6001 gaccaatcaa agttatctgt ccagggaaag tgtaccgccg cgacaatgat gatgcaactc
     6061 actcccacca atttacgcaa attgaagggc tggttgttgg cgaaaacatc acgtttgctg
     6121 acttaaaagg aacattaact gttctcgcaa aaacaatgtt cggtgaagaa cgtgaaattc
     6181 gtcttcgtcc atccttcttc ccattcacag aaccatccgt tgaaatggat atctcttgtt
     6241 tcaaatgtgg cggtaaaggg tgccgcgttt gtaaaggaac aggttggatt gaaattttag
     6301 gaagcggaat ggtacatcca aacgtgcttg aaatgtcggg aattgattcc acgcgttaca
     6361 gcggttttgc tttcggctta ggacctgaac gggttgcgat gttgaaatat gcggtggatg
     6421 atattcgcca cctttataca aatgatttac gctttacgaa gcaattccaa agtacagaaa
     6481 cgggggaaat ctaatgttag tttcatataa ttgggtcaaa gaatttttcc aagacttccc
     6541 gttaacggcg gaagagctag gagaagcaat tacaagaaca ggtattgaaa tcgaaggcgt
     6601 agaagaatta agcgctagtt tgaaaaatgt cgtagtcggc gaagttttat catgcgaacg
     6661 ccaccccgat gcagagaaat tgaataaatg tctcgttcaa acagacgaaa cagaacctgt
     6721 tcaaatcatt tgcggagctc caaacgttgc cgctggtcaa aaagtaatcg tagccaaagt
     6781 tggcgcaaga cttccaggtg gacttaaaat caaacgcgca aaactacgcg gcgaagtgtc
     6841 agagggaatg atttgctccc tggctgaact tggctttgaa agcaaagttg taccaaaagc
     6901 atacgcagaa ggaatttatg tattacctgc gcacgtggaa acgggtgtaa gtgcaatcac
     6961 tttacttgga ctagatgatg cgattttgga tatggcaatc acaccaaacc gcgcagatgc
     7021 attgagcatg aatggtgtag ctcacgaggt tggtgcgatt attcatcaaa aaccagcaca
     7081 accaaccgag cctgacgtat ctgaaaaagg aaaagcagac gatttcattt ctgtagaagt
     7141 tgaaaatcca gccgaaacac cttactatgc tattaaaatg gtagaaaaca ttgaaatcaa
     7201 agaatcgcca ctatggctgc aaacaaaact aatgaaagct ggcattcgtc cacataataa
     7261 cgtggtcgat gttaccaact acatcaattt attatacgga caacctttgc attcctttga
     7321 ctatgataaa attggtagca agaaaatcgt tgtacgttct gcaaaagaac aagaagagat
     7381 taccacgctt gatggcgaga aaagaacttt acaggctgga catacagtta ttacaaatgg
     7441 cgtagaacca attgctatcg ctggcgttat gggtggagaa ttttccgaag taacagagaa
     7501 cacaacgaca gtagcgctag aaggtgctat tttcagcagc tcttccatcg gtaaagcatc
     7561 tcgcgaatta tacctacgta cagaagcaag catccgttac gacaaaggtt ctgacgcttg
     7621 gaaagtagaa aaagcacttg cacatggcgg agcgttaatc gctgaactaa gtggcggaac
     7681 actagtaggc ggtgtcgtag aagtagataa ccgtgaaaaa gctgtaaata aaatcgaaac
     7741 aagcctaaca cgcattaacc gcattttagg aacagcaatt acgcttgcgg aaatcgaaac
     7801 aatttttgat cgtttaggtt ttgtattaga agtgaaaaat gatactttaa tcattgaagt
     7861 gccgacaaga cgttgggaca tcactattga agcagatatt ttagaagaag tagctcgtat
     7921 ttacggttac gatgaaattc cggtaacact tcctgcgaca agcacaacag gcggcttatc
     7981 agacagccaa aaagctcgtc gtgtcatgcg cgcttattta gaaggagcag gacttaacca
     8041 agcattaact tactctttaa catctaaaaa agatgcaact cgtctagcgc tttctgatga
     8101 aaaaacagtt gcattatcga tgccaatgag tgaagaacat agccatttaa gaacaagtat
     8161 cgttccacaa ttaattcgta gcgcaagtta taacatcgct cgtaaaaata tggacgtggc
     8221 actttacgaa atgggtaccg tgttctacgc aacagaaggg gacaatttac caattgaaca
     8281 agagcatttg gcaggtctaa ttactgggaa ctggcatacg gttgattggc aaaaaacacc
     8341 aaaaccagta gacttcttcg ttttaaaagg aattgtcgaa ggtttagtga acaaattagg
     8401 tatcaaatcc gaacttcact ggaaacaaac agaaaaagaa gaactgcatc cgggaagaac
     8461 cgccagcctt attttagaag gacaagaaat tggttatctt ggagcacttc acccagcggt
     8521 agaagctaac tatgatttaa aagaaacata tgtctttgaa atcaatgtag ctgctttact
     8581 agatgcaacc aaagaaaaag ttgtgtacca tccaatccca cgttacccag aaatgactcg
     8641 cgacttagca ttgcttgtgg ataaaaatac cgaccatgca acaatttctc aagtaatcca
     8701 agagcacggc ggaaagttac ttgtcgatat cgagctattt gatattttcg aaggggagag
     8761 tcttggcgaa aataaaaaat cgctcgcata cacattgact ttcctagata gcgaaagaac
     8821 actagtcgaa gaagatgtac aaaaagcaac caataaagta atagaagcat tacaagaaaa
     8881 actacatgcg attattcgct aaatgaagaa gaactaggct agctggaaaa cattttcaac
     8941 tagtttggtt ctttttttgt tttttataaa atagtggaag tctttccttt tttagtactt
     9001 cacttactta aataacacat gttataatga tggcacatgc cagagaaaaa aggacgagaa
     9061 aaatgaccta tgtagaaatg aaagatgtat ctaaatacta tcaaatgggc gagaacgttg
     9121 tcacggcaaa tgataaaatc actttcggga taaaaaaggg tgaatttgtt gtaatagtcg
     9181 gaccttctgg agccggaaaa tccactgtac ttaatatact tggtggaatg gatagtgcaa
     9241 gtgaaggcaa aattatggta gatgggcagg atattgctca atataatgca aaacaattaa
     9301 ccaaatatcg gcgaacagat gtcggctttg tatttcaatt ttacaatttg gtacccaatt
     9361 tgactgctaa agagaacgta gaattagctg cccaaattgc gccaaatgca ttagacgcag
     9421 aaactgtttt aactcaagtt ggattaagtc acagattaga caattttcca gcacaactat
     9481 ctggcgggga acaacagcgt gtcgccatag cacgtgcgct tgctaaagca ccgaaactgc
     9541 ttttatgcga tgagccaacc ggggcacttg attacgatac tggaaaatca gtcttaaaat
     9601 tattacaaga aacttgccgt aacacgggaa caaccgttat tgttattacc cataacacag
     9661 cgattacgcc aattgcagat cgaattattg aaattaataa tgcaaaagtt cgcagcatca
     9721 aagaaaatcc agaaccaatg tcgattgatg atttagaatg gtaggaagga gcaaccagtg
     9781 aaacgttcag ctttatggaa agatatttac cgcgaaatat ggcgttctaa gagccgcttt
     9841 atttccattt ttatgctgat tatgttgggt gttgcttttt tctccggact taaagcaact
     9901 ggacccgata tgcttctaac agccgacaat tattttaata agtatgaatt agctaatttt
     9961 aacgtgcaat ctacttatgg actagatgag acggacaagg aagcacttga agatatatct
    10021 ggtgtcgcac aagtggaact cggatataca gcagatactt taatgaaaga taaaaatatc
    10081 gtaacgaaac tattttccaa ttctgaaagc gataatttaa atcaatacaa gatagctagt
    10141 ggccgtttac cagaaaaatc aggggaaatt gcactggatg acaatgacct tgttcataaa
    10201 aatgtcaaaa tcggcgacga agtaactttt gttaaaagtg atggaaataa gttaactaac
    10261 acgctaaaaa aatcaactta taaagtagtt ggcttcgtta gctcaccagc ttacatccag
    10321 aaatctgaac gtggctcgag cacggttgga aaaggaaaaa cagatgcctt tggtgtgatt
    10381 ccagaacagg attttgattt accagaatac actattgcta atcttacttt taacaattta
    10441 gcagcaaaac aagcttttag tgacgaatat gtatccaccg aagaaaaaga taagaaaagc
    10501 gtcgaaaaag ctttagcaga ccaaccagaa aaaagattaa ataaaatcaa gacgaaggaa
    10561 caaaagaaat tagacgatgc aacagcagaa attaacaaac gaaaagcaga actacaggaa
    10621 aatgaagcta aacttgcaaa tgccaaagca caattagaag aaggattttc tgaatataat
    10681 gctgccaaag caagctatga cgccaaaatc aagcatggcg aagcagagat tgcaaacggt
    10741 gaagcagaac gaagaagcgc aaaaaaacaa cttgataccg caaaaacaca gattgaccaa
    10801 ggcgaaacag ctctttcaca agctgagatg gaattagaag aaggtagagc ggcttgggaa
    10861 gatgccaata atcttcttaa tacagcaaat ggttatttgc gaagtgctaa gtcgacatta
    10921 gaaaatgctt taaaacaacc agatttaact gattttgagc tagaccggaa cagcttaaca
    10981 aattcatttc aaatgcttgc atcagaactt gatttatcaa gtgcagagcg cgctgaatat
    11041 gaaaatgcga tgaatcagtt actagatgat tatgaaaatg gcaatattag tgatgcggaa
    11101 attagggaag ccttaaacgc ggcacttgcg caagttggta acgctgaaaa tgaataccaa
    11161 tccgccagag ccactttaga cgctgaaaaa caaaaaatag aacaaggcga acaaacttta
    11221 gctgcaaaaa aacaagaact tcaacaagca aaaactgcct accaagaagg tcttgctaaa
    11281 tatcaagcag gtttagaaaa aatttcgcaa gcaaaacaac aactcgctga tggaaaagaa
    11341 acaggttcca cagaactaca aagcgcactt gctaaattaa acgtaggtca agcggaatac
    11401 gaaaaaaatc tcgctttgtt tgaaaaagag aaagcaaaag cagaaggcaa gctagctagc
    11461 gccgaaaaag aggttaaaat cggtcaagaa aaactagatg cgctcaaact tccaaaatat
    11521 tatgtccttg atcgaaacga caatccaggc tacagcgaat ataaagaaaa tgcagatcgt
    11581 ttaacctcgt tatcaaccgc attcccaatt ttcttcttcc taatcgctgc gctcgtttgt
    11641 ttgacgacga tgacgcggat ggtagaggaa caaagaacac aaattggaac gttgaaagca
    11701 tttggttatt ctaatggtag cattattttg aaatacctcg tatatggttc taccgcgagt
    11761 ataatcggga gcgttcttgg aatattaatt ggattccagt ttttcccgaa tatcattttt
    11821 aacgcctata aatcgatgta tgaaatgcca ccagtggata ttggctttta ctggagctac
    11881 agtttgctat ccttatttgt tgcgttattc tgtacaacat ttactgctta tgtagcttgt
    11941 cgtgccgaac ttcgcgccaa tgcagcaaca ttaatgcgtc ccaaagcacc aaaaattggc
    12001 aaacggattt tcttagaacg aattagtttt atttggaaac gaatgaactt cacaagcaaa
    12061 gtgactgcga gaaatttatt ccgctacaaa caaagaatgc tcatgacggt tctaggagtt
    12121 gctggatgta ccgcattaat tcttactggt tttggattac ggaattcaat tagtgacatc
    12181 gccaaaatgc aatatggcca aattatgaaa tatgatgcag ctatttatca agacatgagc
    12241 gcaccaccag ctgccaaaga aacctttgat gaaataatga atgactccaa tatcaaaagc
    12301 aagttagcta tgtctcaaac aaatattgag accgtaaaat caggacaatc agctcaaact
    12361 acatccatta ttgtccctaa aaatttgaat gaattaccag attacattgt gcttcgcgac
    12421 cgtgccagtc atacaaccga aaaactcacc gatgatggtg cgattattac ggaaaaacta
    12481 gctaaattat ttgacgtaaa accaggcgat acaattaccg tcaaaaacgc tgagaatgac
    12541 aaattccaaa taaaagtcag tgccattact gaaaactatg caatgcacta catttatatg
    12601 acaaaatcat attatcaaca agtatttaaa gaaaaaccta cctacaattt agacttatta
    12661 atgttaaaag atacctctga aaaagtagag agcaattttg cggaaaaatt aacagatagt
    12721 aaagccattt taaacgttac tttttccaat aatgttagtt cattgttaaa tgaaactttg
    12781 gatagtctga atattgttat cgtggtactc attacgtctg cggcattact tgcgtttgtc
    12841 gtgctttaca acctgacaaa tattaatgtt tcagaacgga tacgagaact ttctactatc
    12901 aaagtactcg ggttttatcc aaaagaagtg actatgtatg tctaccggga aaatattatt
    12961 ttaaccttaa tgggcattgc ggctggattt gtccttggat tcttcttgca ccggtttatc
    13021 atcaccacag cagaggtaga ccaaatgatg ttcagtccgg caattagttg gacaagctac
    13081 ctattttccg gcatactcac cctcgttttt gcaactgttg taatggttgt catgcacatt
    13141 aaactaaaac gaatcgacat gattgaagca ctgaaatcag ttgagtgatg atgaaaagaa
    13201 cttgttttta tcggcaagtt cttttcattt gacttaaaaa taaataaagc ttaaactgaa
    13261 aaatagttaa gggggtgaac tttatttgga aagacaaaaa gtaaaacaac tgataaaaag
    13321 ttaccaacaa acatacatat ttgcgatgaa tcaaatacat caagctattt cagaaatttc
    13381 agcaagtact gtagaccttt ccattgagca gttttttgtt ttgcgtgaga ttgctaccta
    13441 tgatggtatt agcgcaacag aactagcagc cactttagca gtaaataaga gcgctattac
    13501 acctaaactg aaaaaattag aagaaaaagg ctacattaga cgagaacgaa accaacaaga
    13561 taaacgcgcc gtagttttaa ctatctcaga aaaagggaat aacgtttacg aagaatgcga
    13621 aaaacaatta gagttactcg tgaatgaatg gctcgaaata ctaggggaaa aggacagcga
    13681 acaatttttt gaattatttc aaaagattac caagtcggtt gttgagccta gacaataaaa
    13741 ggagagattt ggcatgaaat ggattatgaa actccgctgg gccattttag cattttggct
    13801 tgcagcagca gtcgtactaa tgattattgc accacccatg gcagatcttg tacgcgaaaa
    13861 aggcgaatta aagctgcctg atggctatcc gtcatcacta gcaacggaaa tgcaaaagaa
    13921 acataatcca gatgacaagg gttcagctta catcgctgtt tatactgccg accataagtt
    13981 aactggaaca gaattaaacg atattcagga ttcactcaac tctatcgaaa aagataaaga
    14041 cgaacttcat gtaacaaacg tgttatctag ttttaaccaa ccagaactta aagataagtt
    14101 cttatcaaaa gatggtaaaa caatggtagc aagtttaacc gtagatgata cggatgcctc
    14161 ggttaaaagc atacgtaacg cattagataa gaaaatggat gtaaaaggtg ttgatacgta
    14221 tttaacaggt aataaactaa ttcaagaaga tgtagttcaa ggatctgaag acggtttaca
    14281 taaaacagaa ggcatcaccg ttgtctttat tttagttgta ttattccttg tattccgctc
    14341 agcagtggca ccgtttattc cacttgtaac agtgggaatt agttacctcg ttgcgcaaag
    14401 cacggtagca ttcttaattg atatctttaa tttcccagtc tctacataca cgcaaatctt
    14461 tatggtttgt attatgttcg gaattgggac agactattgt attctcttaa tgagtcgatt
    14521 taaagaagaa atgggtgccg gtctcaatcc acgagaagct gttcatgcaa cgtatcgtac
    14581 agcaggaaaa acagtcattt atagtggtgt agctgttctc gtagcattta cttcgctata
    14641 ttttgtacaa tttgatttat atcgttccgc agtagcagtc ggcgttggga ttgtcgtttt
    14701 acttgccgcg ctgtacacgc tcgtaccatt ctttatgagc acactcggaa cccatttatt
    14761 ctggccgtta aataaaaata ttagccataa agaaaataaa atttggggcg ctgctggtaa
    14821 attcactttt gcaagaccgt ggattgcttt attaatcgtt gcagctatca cgttgccgcc
    14881 aatcttattg catacaggaa cagaatcatt taactcatta gacgaaatta gtgacaaata
    14941 tccttccaaa aaaggttttg aaatcgtatc ggacagtttc ggagcaggcc aagtagcgcc
    15001 aacacaaatt tttatcgaaa atgacgataa tatgcgaact acagattaca tcgcgcaaat
    15061 tgaaaaaatt tccgatgatt tatctcattt aaaaggcatc gatatggtta tgagtgcctc
    15121 acgtccagcc ggaaaacggg tagatgacat ttacattaaa aaccaagccg gacaagtaaa
    15181 tgacggtgtt ggtcaagcaa ctgatggcgt aggggaagtg aaaaaaggac tagattcagc
    15241 aagttcagaa ctcaaaaaat ccgagcccgc cttggataaa gctgttgcag gagtgagcga
    15301 tttacaaaaa ggcactgtcg caacacaaga aggaattaac caactacaaa cagcactcgc
    15361 acaaatccaa acaggcattg aaagcggagc aactggtgct ggtgatttaa aacaaggcgt
    15421 agcagaagcc aaatcacaac tagctacgtt acaaaatgga gaagcgcaaa tccaagcagg
    15481 atacgtagaa attcagaaaa acctacaaaa cgtagctgac caactaaaag gctttgaaga
    15541 ccctagctct caagcaattg atacttccaa acttgaagag caattcaaaa aaattggtgc
    15601 ttctttccaa gcgttcgcag cagcgcatcc agaagtgaga aatgaccctc gtttccaaaa
    15661 actagccgca gatattcaag gcttagaaac agctggtaac gaactgaaaa cctctgctgg
    15721 acaacaaatg gcagcacttc aagcaaaaat gaaagaacta aatcaaggta ttcaacaact
    15781 cgcaacagcg atgaatcaat taaacgagca gtccaaacaa atctctgatg gacttagcgc
    15841 ttttagtaca ggacttggtc aaatcgaaac aggacttgat caattagaaa aaggtctcaa
    15901 tcaagccgca gatggtcaag gacaagttgt ttccaaaatg ccggaaatct ctaatgcact
    15961 aacgcaaatc gctgctggac aaggtgccct aaaagatggc tttgcaggca ttagcggtca
    16021 aatgggtcaa ttaacagatg gcttaacttc tggcgcagac ggcctaggca aagtagaaag
    16081 tggtctaaac acagcgaacg gacttattga tgattggtca aaagttcctt acgcaagttc
    16141 cggaatttat gtaccggatg ctctactaaa aaatgctgat ttccaaaaag tattagatca
    16201 atacatctct tctgatggaa aactggcaac gattaatgtg attttgacga aaaatccata
    16261 ttccaatgaa gcgatggatt caattgatga cattaatgaa caactctcag ctagcatgaa
    16321 aggaacaaaa ctggaaaatg cgaaaattgg tataggtgga atgacgagtg ccaattacga
    16381 tacgagagat atgtcaacag ctgactatca tttggttctt gtaatcgttc tagcgagtgt
    16441 tttcgtgaca cttgttatcg tcttgcgttc tctagtaatg ccaatttatc tgattgcatc
    16501 actcgtatta acgtactttg ctgcacttgg gttcgcagaa attatcttca tgcgaattct
    16561 tggatacagt ggtctaacgt gggcaacacc gttcttcgga tttgtagtac tcgtcgcgct
    16621 cggtatcgat tattcgatct tcttgatgtc aagatttaac gaatacaacg gactttctgt
    16681 acgcgataga atgataaaag ccatgaaaaa tatgggtggc gttatcttct cagcggtcat
    16741 tatcctcggt ggaacattcg ccgcaatgat gccagctggc gtgctttcct tactcgaaat
    16801 tgcgacggtc gttttaatcg gcttagtact ctatgccgtc gttattttac cactcttcgt
    16861 tccagtaatg gttaaactat tcggacgtgg caactggtgg ccatttatta caagaaaagg
    16921 cgaccatcaa gaaaacgtac caccgaaaaa ataacataat aaaccgcatt cctttaaaaa
    16981 aggggatgcg gtttttagtt tgcttccaaa gactattttg ctaagatata gttagatgaa
    17041 tgaaggagga aaaaatcatg ataaaactcg gaaatgactg ggatgagtta ctaaaagatg
    17101 agtttaacca accgtattat ttaacccttc gccagttcct aaaaaaagaa taccaaacga
    17161 aaaaagtatt tccggatatg tacgacattt tcaatgcgtt aaaatatacc gcttgtaagg
    17221 atgtcaaagt ggtaatactc ggtcaagacc catatcatgg accaggtcaa gcacacgggc
    17281 tctcattttc cgttcaacaa ggagtgcaga ttccaccatc actgcagaat atttatttgg
    17341 aattacataa cgacttgaat tgtgagattc caaacaatgg ttatttgata cggtgggcag
    17401 atcaaggagt gctactatta aatacggttc taactgttcg cgccggtcaa gccaactcac
    17461 accgaggaca aggctgggaa atactaacaa accgcattat tgaaatcatt aaccaaaaag
    17521 aagagcccgt agtcttttta ctatggggaa acaatgcgaa agaaaagttg caattgttaa
    17581 caaatccgaa acatactgcg tttacatccg tacatcccag tccactctca gcatcgcgcg
    17641 gttttatggg atgcaaacat ttttctaaga cgaatcaatt tttagaacaa aatggtgtaa
    17701 aaccaattga ttggcaaatt ccttctatat aaataaaaac atctcgccat ttattgacga
    17761 gatgtttttt tactttttaa ccatttttaa tgctttctct gtattagcga aatgctgttt
    17821 tgtatatttc gctaatgttt ccagaccaaa tcgttcgatg atttccgctg caacagcatc
    17881 cacatgaggt cctgcgcctt ttggaagtgg gatgccaact tcttttgaca tcgcatcaaa
    17941 agcttgcaca aatttataac gagcaataat cgaagcagca gcgacggaaa gatgtaatcc
    18001 ttctgctttt gtcgcaaaaa acacatcttc tcgaataatg cttggttctt ttgctaaata
    18061 gcgataatac gtattttttt cagcaaattg atcaattaaa atcgcttctg gtttgacagg
    18121 tgcgagcttt ttcaagacgt tttcaatcgc gcggttatgt agtaaagctt tcatttgtcc
    18181 ttggttcatg cctctttttt ggagttcgtt gtatttagga ttagggcaaa gcagcacact
    18241 gtgcggaaca agtggcatga ttttctcagc aatacgacaa atttctggat ctttcattgc
    18301 tttcgagtcc tttacaccta gctcttttaa caggggcatc atttcggcgt ccacatatgc
    18361 ggcacaaacc gtaatcggtc caaaaaaatc accggtgcca acttcatctg aaccaatgac
    18421 attttttgat gcgaagtttg ccggaagaat tcctttagag acggaaggtg cttttgtttt
    18481 tgattctgga agagtcgcca cccatttttt tgcttctact tctccgttta ctccttggaa
    18541 catcactttg cgcgacttgt agccagtgat ggaaacaccg gttttttttg cagcgaaaac
    18601 agctcctggt ggtagctttg gattagaaaa tgggagatat gtttgtttca ttttttcaag
    18661 tgttggttga tcgactaaga taactgtatt tgcgataagg catcatcctt tcaaagttct
    18721 attgtaacat actacgacga aagactgaat atcggctaaa cgggtggttg actcttttct
    18781 ttcctgcttt ttcgtgataa gattatgaca agtagcggcc taaatgaatt tgggcgagga
    18841 ggaatatacg tggcaaatga gagaaataaa gtagtgacaa caatttacgg tagagaatat
    18901 acgattgttg gcgtagaaac aacagaccac ttacgtaaag tagctcgcga ggtcgatgaa
    18961 aaaatgcacg aaatcggctc ccaaaatcat gcactagata gtggtaggct tgctgtactg
    19021 acagctgtga atgcgacaca cgattactta aaactagaac aaaaatatct agagttagag
    19081 caagaactgg ctcgaattaa aggaagagat taatgatttt aaatgcgatt attttaattt
    19141 tacttgtttg cggctttttc gcaggattta gaacaggcct tatcaaacaa cttatcttat
    19201 tattaggtta tattttggca ttttttatct cgtatacgta ttacgaagat ttagcgccac
    19261 atttaacgtt tataccttat ccaggtagtg atactgcaga tggattatcc attattttac
    19321 aagaattacg aacagaaacg gcctattata acgtacttgg atttgcgatt atttttattg
    19381 tcgcaatcat tgtcgttcat atgcttgcat cacttgttgg tggcttgact aagattccag
    19441 tcctgcgcca aattaatgga ttgttagcag ctgtttttgg tgttgttaag tcctacttaa
    19501 ttatttttgt tgtcttgttc atcatggcaa tttacccggc gaattggtct gaaaacctta
    19561 ttgatagctc aacggttgcc cagtggatgc ttgaaaacac gccaatttta tccgaacaat
    19621 tttatgactg gatgacagac attctgccaa aataaaagaa acattcgata ccagatgtat
    19681 actcttagcc aattttggat aggatttctc tggtattttt taatgatttt acagggagga
    19741 ataaagatgg ctactaataa aaaagaaatt attcgtttac tcgaagaaat tgccacttat
    19801 atggaattaa aaggagaaaa tagctttaaa atatctgctt tccgcaaagc tgcacaagca
    19861 attgaattag atagtagaag tttatctgaa attgatgatt ttacgaagat tagtggcatc
    19921 ggaaaaacaa cgggcgaaat tatccaacgt tatttagata gcggagaatg tccagaactt
    19981 gaggcgctta aaaaagaagt accagctggt cttgttccac ttttagatgt gccagggcta
    20041 ggaggcaaga aattatcgcg tctttatcat gagcttggtg tggtggataa agatacatta
    20101 ctccaagaag cagaaaatgg ccatatcgaa gcattgaaag gttttggtaa aaagtctgct
    20161 gaaaaaatgg ccgaagcagt gcgcgaaatg ggtgagcgcc ctgatagata tccgctaaat
    20221 gatgttttac caatcattca aaaagtagaa gcttatcttg cggatattgc tccaatcgaa
    20281 acttttgctc aagctggaag tctacgcaga ttgcgggaaa cggtgaaaga tttagattat
    20341 gttattgcga cggaaaaacc agaagaagtt caaaaagcat tactggcatt tccattaatt
    20401 acggacgtta ttggagctgg tgaaacaaaa gtatcagctg tattagaaga taatattacc
    20461 atttccgtgg atttccgttt agtagaaaag aaagcttttg caacgacact acatcatttt
    20521 acgggttcta aagatcacaa catcaaaatg cgccaattag ctaaacaatc caatgaaaaa
    20581 ataagtgagt atggagtcga gcaagaagat ggaagtgttc gtcactttga atcggaaaaa
    20641 gcatttttcg agcattttaa gattccgttt ctcccacctg aagttcgccg agatggtaca
    20701 gaaattgagc gcgtgacgaa agatacaaaa ttccttgagt taagcgatat tcgcggggac
    20761 ttgcacatgc atacaacttg gtcggacgga gcctacgcga ttccagaaat gattgaagca
    20821 tgtatcgcaa aaggatatga atacatggtt attacagatc acgggaaatt tttgcgagta
    20881 gctaatggtc tggacgaaaa aagattattg gagcagcaag cagaaattaa aaaaatagca
    20941 gctaattatc cggaaattga tgtttattcc ggcgttgaaa tggatattct ggcagatggg
    21001 tcgcttgatt ttgatgatga gactttgaag cagttggatt ttgttatcgc atccatccat
    21061 tccagtttcc aacaatcaga agaagaaatt atgaagcgat taaaaacggc ctgtgaaaat
    21121 ccatatgtgc gtctgattgc gcatccgaca ggtagaattg tcgtgaaaag aaagccatat
    21181 catgttaata tgaaagaact aatccagtta gcgaaaaata caggaactgc cctagaatta
    21241 aatgccaatc cgcaacgtct tgatttaaac cgtgagcatt tagaaatggc acacgctgcc
    21301 ggggtaccga ttgcgattaa cacagatgcg cacgacacga agcaccttga tttcatgtct
    21361 attggcgttc gagctgctac aaaagcctgg ctcgacaaat cggccattct aaatacgaaa
    21421 acagcagctg aatttaaaca ttttttacag aataaataac ttttaaaaag aaggatgact
    21481 aatggaaaaa aaagtagaag ccattttaga atttgataaa ataaaaaaac aactcaccga
    21541 atttgcttct tcgtcactgg gggagcaagc gattttggaa ctcgctccag caactgattt
    21601 tcaagtagtt caaaaaacgc aacttgaaac agaagaagga gccaagatta ttcgtttacg
    21661 gggaagtgcg ccaattactg gtctaacaga tgtttttgca catttgaaac gtttagagat
    21721 tggtggcgat ttaaacgggc tagaaattta ccaaataggt agtaacttgc gcgttagccg
    21781 tcaaatgaag aattttatga acgatttact ggaaatcggt gtcgaattgc ctttactcgg
    21841 cgccctttcg gatgaacttt tagtactaaa agaagtagaa gaggatattg cgatttcagt
    21901 agatgaaagc gggaaagtgt tagatactgc gagtgaagcg cttagtacga ttcgccgaac
    21961 actccgccgt accgaagacc gcgtacgtga aaaactagaa tcttatttgc gcgatcgtaa
    22021 tgcctctaaa atgttaagcg atgcggttat tacgattcga aatgatcgtt atgttatccc
    22081 agttaaacaa gaatacaaag gtcattatgg tggtatcgtt catgaccagt ctgcttccgg
    22141 tcaaacgctt ttcatcgagc cacaaagtgt agtggattta aacaacgaac gaaaagcact
    22201 tcaagcaaag gaaaaacaag aaatagaacg cattcttgct gaaatttctg cttcactagc
    22261 tgcttggatt aatgaaattc atcataatac tttcatcctc gggcgctttg attttatttt
    22321 cgccaaagca cgtttcggaa aagcgatgaa agctgtaacg ccgcatttga gtgatgctgg
    22381 tgtcgtccat ttaatcgccg cacgccaccc gcttttagac gctgcgaaag ttgtagcgaa
    22441 tgatatttat ttaggcgaag atttcactac catcgttatc accggtccaa atacaggtgg
    22501 taaaacaatt accctgaaaa cattgggatt actaacactc atggcacaat ctggacttca
    22561 aattcccgcg caagaagatt ctactatcgc tgtttttgag catgtatttg ccgatattgg
    22621 tgacgaacaa tccatcgaac aaagtttaag tacgttctca tctcacatga cgaatattgt
    22681 ttccattttg ggaaatgtta atcagaaatc gcttattttg tacgatgaac tcggagcggg
    22741 aacagaccca caagaaggtg cggctttagc aatcgccatt cttgatgcaa gccatgcaaa
    22801 aggtgcaagt gttgttgcga cgacccatta tccggaacta aaagcatatg gatataatcg
    22861 cgttcacgca accaatgcat ctgttgagtt caatgtcgaa acacttagcc caacttataa
    22921 attattaatc ggtgtacccg gtcgaagtaa tgcttttgat atttcacgcc gcttaggatt
    22981 aagcgaaaat attatcactg aagcaagaag ccttgtcgat accgaaagtg ccgatttaaa
    23041 tgatatgatt tccagcctag aagagaaacg gaacttagcg gaaaccgagt atgaggaagc
    23101 acgtgaatta gctcgcgggg ctgataacct tttaaaagat ttacaaaaag aaatcagcaa
    23161 ctactatcaa caaaaagata aattaatcga acaagcgagt gaaaaagcag caactattgt
    23221 ggaaaaagcc gaagccgagg ccgaagaaat catccacgaa ttgcgcacca tgcaattaaa
    23281 cggagcagca ggaatcaaag aacatgaact tatcgatgcc aaaacaagac ttgggaatgc
    23341 taaaccaaaa acaataaaca aaaccatccc acaagcgcca aaacaaaaac cacatgtatt
    23401 ccaagaaggc gacaatgttc gtgtcctctc ccttggccaa aaaggcacac ttttaaataa
    23461 aattagcgat aaagaatgga acgtccaaat cggcatcatc aaaatgaaaa tcaaaactac
    23521 tgacttagaa tacattcaac cagaaaaacc aaaaaaacaa cgtatcatca catctgttca
    23581 tagtagtggt tcaccagcta aaagcgaact cgatttacgc ggcgaacgat atgaagacgc
    23641 gctacaaaaa gtcgacaaat atctagatga agcactactc gcaggatatc ctcaagttgc
    23701 cattatacac ggtaaaggaa ctggtgccct tagaaccggg gtcacagaat atctgaaaaa
    23761 ccaccgcatg gtcaaatcaa tccgttttgg cgcagcagca gaaggcggaa atggcgtaac
    23821 gattgttgag ttcaagtaaa caactgagca aaaacatggc tccaaatagg tctaggtgct
    23881 atactgtgtg tacgaaagtc ataaggagtg aattaaatca tggtaaaaga aattacagat
    23941 gcaacatttg aacaagaaac tagtgaaggc ttagtattaa cagatttctg ggcaacatgg
    24001 tgtggtcctt gccgcatggt ggctccagtt ttagaagaaa tacaagaaga acgcggcgaa
    24061 gcacttaaaa tcgtcaaaat ggacgtagat gaaaacccag aaacaccagg aagctttggt
    24121 gtgatgagta ttccaacact tcttatcaaa aaagacggcg aagtagtaga aacaattatc
    24181 ggctaccgtc caaaagaaga actggatgaa gtcatcaaca aatacgttta aaattatgct
    24241 aaaatgaaag aagcttagaa caaacattct aagcttcttt ttaaatgtgt aactggagtt
    24301 gataaaatgt cttctgaaca tatccaaaat aaactagcgc ttctgccgga ccaacctggt
    24361 tgttatttga tgaaagatag acaaggaacc attatttatg ttgggaaagc aaaaatttta
    24421 aaaaatcgtg ttcgatccta tttttcagga acacacgata gtaaaacgca acgcttagtt
    24481 caagaaattg tggactttga atatatcgta acatcatcca acgtagaagc cttgctacta
    24541 gaaatcaatt tgatcaaaaa acatgatcct cgttttaata ttcgcctaaa agatgataaa
    24601 acttatccgt ttattaaaat cacgaacgaa cgacatccac gcctaattat tacccgtcaa
    24661 gtaaaaaaag acaaagggaa atattttggt ccatatccaa atgtgtatgc tgctaatgaa
    24721 gtaaaacgta ttttagatcg actgtatcca ttacgtaaat gcagtacgct accaaataaa
    24781 gtgtgtttgt actatcacct cggacaatgc cttgccccgt gtgtatttga cgtggaagca
    24841 agtaagtata aagaaatgca agacgagata gtcgcattcc taaatggcgg ctataaaact
    24901 gtcaaaaatg atttaatgaa gaaaatgcaa gaagcagctg aaaatatgga attcgaaaaa
    24961 gcgggtgaat tccgcgacca aatcaacgca atcgaaacaa caatggaaaa acaaaaaatg
    25021 acgatgaacg atttcgttga ccgtgatgtc tttggttatg ccattgataa aggctggatg
    25081 tgcgtccaag tattcttcat tcgtcaaggg aaactaattg agcgcgatgt ctcccagttt
    25141 ccattttata atgatgcaga tgaagatttc ctcacattta ttggtcaatt ttaccaaaaa
    25201 gccaatcata ttccgcctaa agaaatttat ttaccagatg atgtcgatag cgaagccgtt
    25261 caagcggtcg ttcctgacac aaaaatcatc gtaccacaac gcggaaataa gaaagatctc
    25321 gtaaaacttg catacaaaaa tgcgaaaatt gccttaaacg aaaaatttat gctacttgaa
    25381 cgtaatgaag aacgcacagt cggagcagtt gaacggcttg gagaagcaat gggaatccca
    25441 acaccgtcac gcgtcgaagc tttcgataac tcgaatattc acggtacaga cccagtttcc
    25501 gcgatggtca cattcctcga tggcaaacca agtaaaaatg attaccgtaa atacaaaatc
    25561 aaaaccgtag aaggacctga tgattacgca acaatgcgcg aagttattcg acgtcgttac
    25621 tggagagtac ttaaagaaga actaccaatg ccggatttaa tcttaattga tggtggtaaa
    25681 gggcaaattg atagtgccaa agatgtccta acgaatgagc taggcttaga tattccagta
    25741 gcaggacttg caaaagacga caaacaccgt actagccaac tattattcgg tgacctactt
    25801 gaaatagtcc cactcgaacg aaacagccaa gaattctacc tattacaacg aatgcaagat
    25861 gaagtccacc gtttcgctat tacattccac cgccaacttc gcagcaaaac aggcttccaa
    25921 tccattcttg acggcatccc aggagtagga cccggtcgca agaaaaaatt acttaaacac
    25981 ttcggctcca tgaaaaaatt aaaagaagca tcggtagaag aaattaaaga agccggtgtc
    26041 cctttgaatg ttgcagaaga agtgcataaa cacatcacag cattcaatga aaaagcaaaa
    26101 aataccgagc aaaaatgatt ttcaacacga ttttaaacgc caataacttt gatgttattg
    26161 gcgttttatt gcataaaaat tgttactaac atgtcagatt aaatagcttt tacatataat
    26221 aaacttccct tcaacacata aatgcgctaa aatataaaca ttgataaaaa agaactaaca
    26281 aggcaggagg gaacgagatt gggactagtc gtattaaaat ttggcggaac atcagtgagc
    26341 acggtggata aaatcgggaa aacagcagat caagccattt atgaaaaaaa acaaggaaat
    26401 aaagtcatcg tcgtcgtttc cgcaatgggg aaatcaaccg acaaattagt cgcgatggca
    26461 gaagaaatta gcgaggcacc agataaacgc gaaatggata tgcttctttc tactggtgag
    26521 caaatcacaa ttgctttact tgcgatgaca ttaaaagaaa aagggcacga tgctatatcc
    26581 tatacaggat ggcaagcggg aattgaaaca gaagccgtac atagtaatgc tagaattgcc
    26641 gatattgata gcgctcgtat tgaatctgcg cttgatgcgg gacaaattgt tgttgtagca
    26701 ggttttcaag gtttcacgac agatggtgaa attactacat taggacgagg tggatcagac
    26761 acaaccgccg tcgccatcgc ttctgctcta aatgccgtaa aatgcgcgat ttgtacggat
    26821 gtagtcggtg tatttacgac agatccacgc tacgtgaaaa aagcccaaaa gttagaacaa
    26881 atcacctatg atgaaatgtt agaattagct aatctcggtg ccggtgtttt acatccacgc
    26941 tccgttgaat atgccaaaaa tttccgaatt ccgcttgaag tcagagcgag ccacgaacaa
    27001 gtaccaggaa caatgattga ggaggattta acaatggaaa ataccaaagt agtccgtgga
    27061 attgcttttg aagaccaaat cacccgtgta actatccact ggaaacaaaa agaagcaatg
    27121 cgagtttcta aagtctttac aaaattagca gaaaataata ttgatgtaga tattattatc
    27181 caaggaatta ctggactagg tcacggtaat ctatccttca ctatcaaaac aagcgcactc
    27241 ttagccacac tagcagtttt agaagaaagc aaagaattac ttcaaattga aaaactagaa
    27301 tccgaacaag atttagcgaa ggtgtccatt gttggctctg gaatggtaag taatccaggt
    27361 gtagctgcac agatgtttga agctttaaca gaaaataata ttccaataaa aatgattagc
    27421 acatcagaaa tcaaagtttc cactgtcgta ccagcgcgca aaatggtcga agcagcccaa
    27481 gttttacatg accaatttga actcgataaa taaaaataag cttgtagcat caaagaggat
    27541 ttctctttgt tactgcaagc ttattgtttt aatagcgttc ttcgttatca atcgtttctt
    27601 tacgatccca tttaacgata atggttactt gttttttacg tttatcaatt tcatcgtagc
    27661 tttctgtata cagcttcttc tgtgattgca attgttctgc aataaagcca gcttctagtt
    27721 taaatgtagg ctcttcttgt gtacggaaac gagcagcaac tgtttcacct tctaaaagta
    27781 aacgcatttc atctttcttt tctttcaaaa tgctaaaatt accccaagag gcttcttcaa
    27841 aaaattctgc tacttcttct agagacgcta gtgggaattt acgtgccaag tctttccccg
    27901 cccagtacat aatgtgaggt gcttcatctc caagtagttc aggaattaaa taatcgcgta
    27961 gtaaatctaa accaaaactt ggaacgagag ctttttcctc gtttttattc tgttcatttt
    28021 ctgtcatttc ggatacccca ctttcataca ccattataac caaaatcacc ctaaaatgga
    28081 aagcacaata aataaatttc cacaaaaaag cttttttctc aaaaaagact tgcgaaaaag
    28141 ctcaaaaaat aagaaaatgg aaggtataga taaaaaaatt ggaaattaat aaagaaattg
    28201 aggcgagact gtgaaacaag ctattggctt tattgattcg ggagtaggcg gtttgacagt
    28261 agtgcgagaa gtgctaaaac agctacccca tgaacaagta tattatttag gtgataccgc
    28321 acgttgccct tatggaccac gcgataaaga agaagtagct aagtttactt gggaaatgac
    28381 caattttcta gtagaccgtg gcatcaaaat gctcgttatt gcatgtaata ccgcaacagc
    28441 agcagcatta tatgatattc gtgaaaaatt ggatattcct gtgattggtg taatccaacc
    28501 aggttcaaga gcagctctca aagcaacaag aaacaacaaa attggcgtat taggaacact
    28561 tggtacagtc gaaagcatgg cttacccaac agcgctcaaa ggactaaacc gccgagtaga
    28621 agtagattca ctggcatgtc cgaaatttgt atccgttgta gaatctggcg agtataaaag
    28681 cgccattgca aaaaaagtag tagccgaatc actcttacca ctgaagagta ccaagattga
    28741 tacggtgatt ttgggttgta cgcattaccc acttttaaaa ccaattattg agaattttat
    28801 gggagacggc gttgctgtta ttaactccgg agaagaaact gctagtgaag ttagcgcgtt
    28861 actggattac cataatttat tagatgctac agacgaagaa attgagcacc gttttttcac
    28921 tacgggctcg acacaaattt tcaaagatat tgcaaaagac tggttaaata tgccagatat
    28981 gactgtagaa catattaaat taggaaaata agaggtgcca ataatgagag ttgatggaag
    29041 agaaagtaat gcattacgaa atattgaagt aacaccagat tatttaatgc atccagaagg
    29101 ttctgtgcta attgcatcag gaaatacaaa agttatctgt tctgcaagtg tagaaacaaa
    29161 agtgccacca tttatgcgag gagaaggccg cggctggatt tctgcagaat actcgatgtt
    29221 accacgagca acaaacaccc gaaatatccg tgaatcttca aaaggtaaag ttactggcag
    29281 aacaatggaa attcagcgtt taatcggacg tgcgctccgt gctgttgttg atttagatgc
    29341 ccttggtgaa agaacaattt ggctcgattg cgacgttatc caagcagatg gaggtactcg
    29401 tacggcttct atcaccggcg catttatcgc gatggtcatg gcaatcgcca aactagacga
    29461 agctgtacca tttgctaaat ttcctgtcaa agatttccta gcagcaacta gcgtaggtgt
    29521 tttagaagag ggtggaacag tacttgacct taactacgta gaagacagcg cagcgcaagt
    29581 agatatgaat attatcatga caggtagcgg cgcctttgta gaactccaag gaactggcga
    29641 agaagctaca ttctcggaaa cagaactggc tgaactaatt gccttaggta aaaaaggaat
    29701 tagcgaatta atcgaaatcc aaaaagaaac actcggagac aaagtcacag cgcggattaa
    29761 aggagaataa aaaatgagta aaattattat cgctaccgca aacaaaggaa aagcaaaaga
    29821 attcgaaaaa atctttgcga aatttaatat cgaagtagca acccttgctg attttccaga
    29881 aattggtgaa atagaagaaa ctggaacaac ctttgccgaa aatgccgctc ttaaagcaga
    29941 aacggtcgct agcgtgttaa atcaaaccgt cattgctgat gattctggtt taatcgtaga
    30001 cgcgcttgac ggagctcctg gcgtctattc cgcacgttat gcaggtatcg ctcacgatga
    30061 tgccaaaaat aacgaaaaac tacttaaaaa cttagaaggt gttgaaccgg acaaaagaac
    30121 ggctcgtttc cactgtacac ttgctgtagc cacaccttct gagaaaacat ctttttatac
    30181 cggtgaagta gagggcgtta tcgcagaaca actatgcggc acaaatggct ttggctatga
    30241 tccactattt ttcttaccag aattcggtct aacaatggca gaaattccag cggagaaaaa
    30301 gaatgaaatc agccaccgtg ctaatgccat taaacaacta gaaaaagatt tagcagaagt
    30361 agtagaaaaa gtaaccaaaa agtgagaaaa taagtaacag tatcacgggg gaggaaacaa
    30421 aatgaaatta ttagtagtta gcgacagcca ctcagaacgt gactgcttaa tccatcttaa
    30481 agaaaaatac gaaaatacag tcgatgcgat gatccattgt ggggattctg aattagaagc
    30541 tgacgatcct gcgattcagg gatttcatac tgttcgaggc aactgtgact ttggcggcgg
    30601 ttttccaaat gattgggtgg gagaagtaga cggctaccgc attttcacca cacacggaca
    30661 tctctataac atcaaaatga cactcatgaa tttacgatat cgcgcacgtg aattaaacgc
    30721 agattttgcc ttttttggtc actcgcatga actaggagta gacatgctag acgacaccat
    30781 cattttaaac ccaggaagca tttccttacc aagaggacgc atccgtgtca aaacatacgc
    30841 tcttatcgat tcaacaccag aaggcattca agttcgattc atggaccggg acgacaacga
    30901 actaacggac ctaacccaaa ccttcccatt aacgaagcat aactaggtca aaagacaccc
    30961 gaaaaagaaa aaatgcaata acttaaagaa aaccattgac aaacaagcga tttaaacata
    31021 aaatggtatt tggctgttga aaaaacagtg ccatttgtcc tgatagctca gctggataga
    31081 gcaacggcct tctaagccgt cggtcggggg ttcgaatccc tctcaggacg taaatagcta
    31141 tattaaagaa atctctaaaa cgttgaaaaa ccttgatatt aaaggttgga tggatgtttt
    31201 agagattttt ttatatctta taatatctgt tttattccgt atttttcatg acatttgtga
    31261 caaaatttgt gctatttcca tccattttta atgtgaaaaa agcatctatt ttagtttgat
    31321 tatgt
//
LOCUS       DASDYK010000021        31234 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.021, whole genome shotgun sequence.
ACCESSION   DASDYK010000021 DASDYK010000000
VERSION     DASDYK010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 31234)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31234)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31234
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.021"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..816
                     /locus_tag="U0308_000993"
     CDS             <1..816
                     /locus_tag="U0308_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1430 domain-containing protein"
                     /protein_id="HEM2315965.1"
                     /translation="KEAIISDKVLNIIVPNSKKGLEKDIKNTFLDYFYFQKVEVANIY
                     NKALDLPAVALSKEDLSVNIIYAENNQDYFSYDSNTGDFRTGNITDPIAIVYTGNIDS
                     SSIGAHVTSSVYFIDKSNGDAFNAILPLISNSNAREITHVRSVYQEVSSEITTLKWQI
                     YQQLIGTIILALCLCSFMVLLVLSYYGENLYKQLIYHVFGYSFWKSSKWFSISNLFVS
                     VFSGILIFILSKEPVALYFSVVILIIELCAIYFIKEKAIYKDFKAILKGEKYD"
     gene            809..1432
                     /locus_tag="U0308_000994"
     CDS             809..1432
                     /locus_tag="U0308_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2315966.1"
                     /translation="MIELVNVSKKIQDKLILEKVSLSIGAGEFIAVVGESGSGKTTLL
                     NVIGHLDSKDSGQVIINEMEYQPKKEVMTLKKEVLGFIFQNYLLMENETVLENLSITG
                     GKNRKLMIEHLEEVGMDESYLAKKVYQLSGGEKQRIAIVRILLKPFQLLLADEPTGNL
                     DDKNKHKIIELFLALKKQGKTIICVTHDPEISAKADRIIYIEGGEIR"
     gene            1429..1632
                     /locus_tag="U0308_000995"
     CDS             1429..1632
                     /locus_tag="U0308_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725347.1"
                     /note="Built to rescue LMOF2365_14255 during structural
                     annotation change regression; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin-like WGxF protein"
                     /protein_id="HEM2315967.1"
                     /translation="MKIIGISLVNSLLILLVVLIHKIFFRVLLLGYENLVIYWGSFVL
                     IYFILNLITNKILLPRGGIIENS"
     gene            1797..2633
                     /locus_tag="U0308_000996"
     CDS             1797..2633
                     /locus_tag="U0308_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HEM2315968.1"
                     /translation="MRIERILNNNIVSAIDEDAQELLILGKGLGFNSKVGDPINESKI
                     EKVFELKDDTMDKFKMIVNEIPIQFLEVTDDIVKLFKMKTTKDISDVIYISLSDHLYF
                     ATQRLQENVVIENPLSWEVKRFYQEEYAVAKEAAKMVESKLEIELPDAEISNIALHFV
                     NAEVDSDMNDVTHIMQLIQEIISIIKYHFNIEFDEESTNYYRFMTHLKFFCQRVIIGE
                     TIDEMDEFLYQTVKKSRGAIFECIDKIGVFLEKNYQFTMSHSEQFYLALHIERLLKRK
                     NN"
     gene            2733..4586
                     /locus_tag="U0308_000997"
     CDS             2733..4586
                     /locus_tag="U0308_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HEM2315969.1"
                     /translation="MDYNQLAKEILQAVGGKNNVNEVYHCITRLRFQLKDQSKVNEKQ
                     LKDLDKVMGTNVAGNQFQVIIGNDVPKVFDALVTENPAWKNKETTNKTTRQKGIKGFF
                     SNIFDALSGVFAPILPAIAGAGLIKGFMALFVSLGWLATDTETYRILLAIGDGVFYFL
                     PILVAVSAARYFKANMFVALGIGAALLYPDLTALLSAGTTPHFIGLPVTPVTYAYSVI
                     PILLAIWIMSYVEKWVDRIIPTSLKLLFVPLITMFIVVPLTLVVIGPLGTFVGDGVSG
                     GINWLLNNGGVIGGILIGGAMAIIVMTGMHYAIVPFVISNLAKYGYDKFLPLTYISNM
                     SQAGATFGVFFRAKDKKLKSLAFSTGLTALMGVTEPAMYGINVVYKRPFMASLIGGAA
                     GGGFAMMFGVKAYVLTGNGGIPGLPGLVGDTFVYALIAMALAFIVALIFSYIFGIDEQ
                     IVEATPVAEKIAAGTEVLQAPVTGELVKMSQVNDTTFADEIMGKSIAIKPNEGKLYAP
                     ANGTIISLFKTKHAIAMQSDNGAEILLHVGIDTVKLDGNYFTAHVATGDVVEQGDLLV
                     TFDMEKIAEKYDTTTMMVITNTNEYALVEAKDSGTVTKGNQVMELRSEQNE"
     gene            4579..6027
                     /locus_tag="U0308_000998"
     CDS             4579..6027
                     /locus_tag="U0308_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HEM2315970.1"
                     /translation="MSNTKFPDGFMWGGATAANQFEGGYNLGGKGLACADLFTGGTHT
                     EPRRITAQLEESTFYPSHEAVDFYHHYKEDIKLMAEAGFKVFRMSINWTRIFPTGKEA
                     EPNEEGLQFYEDVFKELKKYQIEPLVTIAHFDIPLALTNEVNGWASRDLIDYYLHYCE
                     VIFKRYKHLVKHWLTFNEINTATMEIGNYLSLGIRHAEGDFLHQKDDPTVRYQALHHQ
                     FVASAKAVKLGHSINPEFMIGCMIAYMPRYPRTCEPTDVLLAKQTEAMHSHFCGDVHV
                     KGYYPFYAKTFFKDNGIELEFDPEDEQVLREGTVDFYTFSYYLTLCASNDPAYKNSGK
                     SVIGGAENPYLKTNDWGMQTDPVGLRIALNDLYTRYNIPLMVVENGLGAFDKLEDDGT
                     INDPYRIDYFKEHILQMHKAIQDGVDLIGFTIWGCIDLVSASTGEMAKRYGIIYVDKY
                     DDGTGDYSRKKKASYYWYKDVISSNGEIGLRE"
     gene            complement(6067..8397)
                     /gene="gshAB"
                     /locus_tag="U0308_000999"
     CDS             complement(6067..8397)
                     /gene="gshAB"
                     /locus_tag="U0308_000999"
                     /EC_number="6.3.2.2"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate--cysteine ligase
                     GshA/glutathione synthetase GshB"
                     /protein_id="HEM2315971.1"
                     /translation="MIKLDMTMLDSFKEDPKLRKLLFSGHFGLEKENIRVTSDGKLAL
                     TPHPAIFGPKEDNPYIKTDFSESQIEMITPVTDSIDSVYEWLENLHNIVSLRSENELL
                     WPSSNPPILPAEEDIPIAEYKTPDSPDRKYREHLAKGYGKKIQLLSGIHYNFSFPEAL
                     IDGLYDKISLPEESKQDFKNRLYLKVAKYFMKNRWLLIYLTGASPVYLADFSKTKHDE
                     SLPDGSSALRDGISLRNSNAGYKNKEALYVDYNSFDAYISSISNYIEAGKIESMREFY
                     NPIRLKNAHTDQTVESLAEHGVEYLEIRSIDLNPLESNGISKDELAFIHLFLIKGLLS
                     EDRELCSNNQQLADENENNIALNGLAQPALKNCDNEEISVVEAGLLELNKMSDFIQSL
                     RPEDTKLQAIIEKQKERLLHPEKTIAAQVKQQVTKEGYVDFHLNQAKTYMEETEALAY
                     KLIGAEDMELSTQIIWKDAIARGIKVDVLDRAENFLRFQKGDHVEYVKQASKTSKDNY
                     VSVLMMENKVVTKLVLAEHDIRVPFGDSFSDQALALEAFSLFEDKQIVVKPKSTNYGW
                     GISIFKNKFTLEDYQEALNIAFSYDSSVIIEEFIPGDEFRFLVINDKVEAVLKRVPAN
                     VTGDGIHTVRELVEEKNTDPLRGTDHLKPLEKIRTGPEETLMLSMQNLSWDSIPKAEE
                     IIYLRENSNVSTGGDSIDYTEEMDDYFKEIAIRATQVLDAKICGVDIIVPRETIDRDK
                     HAIIELNFNPAMHMHCFPYQGEKKKIGDKILDFLFE"
     gene            8567..9454
                     /locus_tag="U0308_001000"
     CDS             8567..9454
                     /locus_tag="U0308_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2315972.1"
                     /translation="MKIRNLTKKMDDNLVLKDVSFDLKAGEITALIGRNGVGKTTLFS
                     TMTGIYLPDEGDVFLGEESIFKHPEVKQQLFFLEDNMNHFNTYSVQTVVKIYRQIYTT
                     FDEAFFNELMQRFELPMKAKLMSFSKGRKALFFIILAVSLNVRFLLLDEPMDGLDIII
                     KKQILATIKDTVKKRGTSVVIASHRLEELEAIADRVIVLKGASVELDYYLEDMRTDAV
                     KIQVAFKTKKIPDFVKNNAQLLYRNGRIYTLLVTENASSFLAELRLEEPVLLEEMSIS
                     IEDIFTVHLANDKIDYYEI"
     gene            9481..10611
                     /locus_tag="U0308_001001"
     CDS             9481..10611
                     /locus_tag="U0308_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEM2315973.1"
                     /translation="MFNRGLWYREWRNMRWMLLGVVILFFLGITLGLMSDADRWNSQK
                     EYYESSEFLKQQKENPEFKTSDEEMKASLTVAYLAVPMYTNFVQDEFVDYMPFMFYFQ
                     VEMFFTLIKVSVFILGVLAVIFERYTRANRFTASLPYKRTHIVGVKMMMGIATIGLSY
                     LISMGIGLTYFMSHVPKEYIQLDAPKFWVDIVGGLFTYLLIFLVAILIGLLIGSPIAA
                     AFVAFGVMLLPSVLNPTLDNMYNFIWPHGGDKGMSKLLRFEDYVNIFSPFSFESASFG
                     AVIFSVILSVLMVVAILILYKKQHIERSGYLFAFSWVKWPFLVLFSLFVGMTAANLAV
                     TDTELGFVGYLAWGIGATIGSFILALYILNKMRGLFQLSKTN"
     gene            10682..11344
                     /locus_tag="U0308_001002"
     CDS             10682..11344
                     /locus_tag="U0308_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1129 family protein"
                     /protein_id="HEM2315974.1"
                     /translation="MTTETETIKPQLAELKANLTKRNLQYVMEVEKHLRETHYSAEQQ
                     EIIVYEMSEKILAEQKKGITARKLFNLTPTEYVVSLDVKAATVEQNTDKWWLVLDGGL
                     LVLGAMMLISGISAYFQKNAQTLGIIVLLITAVVGGFAMLILRKYASNMRAGQKGGTI
                     KYLLVAVGVIAVWMFVMTIVQVTIPPNINVALSPIVNTVGGAIIIALRFYVKKKKNIP
                     SL"
     gene            11445..12179
                     /locus_tag="U0308_001003"
     CDS             11445..12179
                     /locus_tag="U0308_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2315975.1"
                     /translation="MFSYEVIRQFTETEHHLYRYIMDNRDKVMFMRVRELSEVTHVSP
                     ASIVRFTRKLGCEGFSEFKVKLKQEATREVKKKTADTVEVLEEFFERTMNRDYDHVLD
                     AAAEIINEADLVVFFGIGTSGILAEYGSRFFSNMKKRTFYIKDPFYPNPGEQFKNKAV
                     MIILSVSGETDQVLEQAQNMQQYGSRIISITNTSHNTLAGLSDVNIPYYVTQEMVDKT
                     NITTQIPVLFLLEAMAKKNYNQEQEE"
     gene            complement(12219..12527)
                     /locus_tag="U0308_001004"
     CDS             complement(12219..12527)
                     /locus_tag="U0308_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2315976.1"
                     /translation="MNEMETVIFGMISQVGSARSSYLEGLRAAREGNFEEAEAKLQEG
                     SETLANGHHEHHKLIQKEASGEKVEIQLLLIHAEDLLITTETLREVVTEFVHVYKKIS
                     "
     gene            complement(12520..13404)
                     /gene="bglK"
                     /locus_tag="U0308_001005"
     CDS             complement(12520..13404)
                     /gene="bglK"
                     /locus_tag="U0308_001005"
                     /EC_number="2.7.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucoside kinase"
                     /protein_id="HEM2315977.1"
                     /translation="MKIAAFDIGGTALKMGVVLPHGEIILTKSAEIIASDGDQILAEM
                     KLFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGIPVAIEN
                     DANCALLAEKWLGKGQNLDDFLCLTIGTGIGGGIFSNGALVRGGRFRAGEFGYMFSER
                     PGAFRPGKYTLNETTTMLVLRRQYAELTGRPLEEITGEEIFAKYDGHDAVSERLITEF
                     YTGICTGLYNLIYLFDPTHIFIGGGITSRPTFITELKHHMESFGLRDTIIETATHKNQ
                     AGLLGAVYHFLQEENRHE"
     gene            complement(13416..14768)
                     /locus_tag="U0308_001006"
     CDS             complement(13416..14768)
                     /locus_tag="U0308_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2315978.1"
                     /translation="MSIMSKFEHGMERVLVPVANKLNSQRHIAAIRDAFILVFPLIMA
                     GSIITLINFAVLSPDGFIAKILFLGKIFPNLADAQAVFSPVMQGSTNIMAILIVFLVA
                     RNLAIFFKQDDLLCGLTSIGAFFIVYTPYTVVDNASYMTIKFLGAQGLFVAIIVAIIT
                     GEVFSRLARSPRLMIKMPDQVPPAVARSFKVLIPVIIITILFSVINYLITLIAPEGLN
                     DLVYTVIQAPLKDMGTNVFSVIIIGLVSNLLWVLGIHGPNTVAAIRDTIFTEPNLDNL
                     SYVAQHGSAWGAPYPATWAGLNDGFANYGGSGMTLGLLIAIFIASRRADYRDIAKLSL
                     APGIFNINEPVIFGLPIVLNPIMVIPFIITPAINTLIGYFFISTKLIPPVAYQVPWTT
                     PGPLIPFLGTGGNWLALLVGLLCLAVATVIYLPFVLVSNKIAASDAAMDKNATASTEQ
                     "
     gene            complement(14801..15103)
                     /locus_tag="U0308_001007"
     CDS             complement(14801..15103)
                     /locus_tag="U0308_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2315979.1"
                     /translation="MKKILLVCAAGMSTSLLVTKMKAHATSIGEEIEIEALPVSEASS
                     VVDKMDIVMLGPQVRYQKPQVDELVQGRIPVIVIDMKDYGMLNGKAVLEKAFAEIG"
     gene            complement(15147..16601)
                     /locus_tag="U0308_001008"
     CDS             complement(15147..16601)
                     /locus_tag="U0308_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2315980.1"
                     /translation="MEHNKLKPFPKDFLWGSASAAYQVEGAWDEDGKGPSVWDEFVRI
                     PGTTFKETNGDVAVDNYHRYKEDVALMAEQGLKAYRFSVAWSRVIPHGNGEVNEAGLK
                     FYDNLIDELLSYGIEPVVTLYHWDIPQGLQDEYGGWESRKVVEDFTNYAALLFERFNG
                     RVKYWVTLNEQNVFISHGYKLAYHPPGVSDDKRMFAANHNANLANASAIAKFRELGTS
                     GKIGPSFAYGPSYSIDANPANVLASENSEEFNAHFWMDVYTWGEYPTATWNWLEEHGL
                     APEILPGDTELLKKGKPDFMGVNYYRSMTHAFNGKDGVGSGKMNTTGEKGTSEETGVP
                     GLYKNTNNPYLEKTNWDWDIDPTGLRIGLRRITNRYKLPIMITENGLGEYDSLTEDHK
                     IHDEYRIEYIRAHALAIQEAITDGVEMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDE
                     NDEKELKRYKKDSFYWYKKTIEANGANLVEEQGK"
     gene            complement(16629..16937)
                     /locus_tag="U0308_001009"
     CDS             complement(16629..16937)
                     /locus_tag="U0308_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315981.1"
                     /translation="MGRLRQCNCNTGKNCTDNIQKFSYTSSRIQKKHVISPLFINTYR
                     IRDTSPNVNCSSNHMHETQRFSSETYTIDMKHEPKAPKSIYQLVETVYINKASKTKTD
                     "
     gene            17119..18729
                     /locus_tag="U0308_001010"
     CDS             17119..18729
                     /locus_tag="U0308_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM2315982.1"
                     /translation="MTIVAMNDVVKSFTGDIILEKVSLQLEEGERVGLIGRNGEGKST
                     ILKILKGTEGVDSGIVTSKKGAKIGLLEQLSTVDPNIIVEQYLRTSFGELEELEKELR
                     ALEGEMATNSSEKLMNRYGDKMALFGELGGYEMDANLNKVVNGLGIGLLLSQRWGDLS
                     GGEKTKAALAHLLLQKTDLLLLDEPTNHLDLMAVEWLTAFLQHYSGTVLVVSHDRYFL
                     DEVVGKMVELENRELIVYHTNFSGYLKEREERLLREFQDYKDQQKKIKKMQQAIKRLR
                     QWAMQANPPNDAMFRRAKNMERALERMEKVKRPVLTQKQMQLQFDEAGRSGQEVVVME
                     NLSKSFSEKAIVQDVSLQIRQGERVAIIGENGAGKSTLLKIMEGKVVPDVGMIKVGAS
                     VKIASLSQQMEELNEKLTVLDAFRDKVAVTEGEARQMLAGFMFYGEMVFRKVGNISGG
                     ERMRLRLAQFINMPVNTLILDEPTNHLDIASREILEEAIRAFSGTIITVSHDRYFIDQ
                     LCSKVIWLENKQLTVYEGNYSYATSKRR"
     gene            18787..19317
                     /locus_tag="U0308_001011"
     CDS             18787..19317
                     /locus_tag="U0308_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribose-binding protein"
                     /protein_id="HEM2315983.1"
                     /translation="MEITVVKGDITEQDVDVIVNAANPGLLGGGGVDGAIHQAAGPDL
                     LKECQEVINRIGTCPAGEAVITSAGDLQASYIIHAVGPIWKDGEHQEANKLASCYWKA
                     LDLAAGKELTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIEEIRFVCFD
                     EENLKLYNKLINSEVV"
     gene            19605..21071
                     /gene="guaB"
                     /locus_tag="U0308_001012"
     CDS             19605..21071
                     /gene="guaB"
                     /locus_tag="U0308_001012"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEM2315984.1"
                     /translation="MWETKFAKEGLTFDDVLLVPAKSDVLPNDVDLSVEMAPSLKLNV
                     PIWSAGMDTITEAKMAIAIARQGGIGVVHKNMSIEQQAEEIEKVKRSESGVIIDPFYL
                     TPDHQVFAAEHLMGKYRISGVPIVNNEKERKLVGILTNRDLRFISDYSTVIKDVMTKE
                     NLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITIKDIEKVIEFPNSAKDKH
                     GRLLAAAAVGITNDTFVRVEKLIEAGVDAIVIDTAHGHSAGVINKISEIRQTFKDVVI
                     VAGNVATAEGARALFEVGVDIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATVAREF
                     GKTIIADGGIKYSGDIVKALAAGGNAVMLGSMLAGTDESPGETEIFQGRQFKTYRGMG
                     SLAAMEHGSKDRYFQADAKKLVPEGIEGRVPYKGSVADIIFQLVGGIRSGMGYTGSPD
                     LRHLREEAAFVRMTGAGLRESHPHDIQITKEAPNYSIS"
     gene            21232..23004
                     /gene="recQ"
                     /locus_tag="U0308_001013"
     CDS             21232..23004
                     /gene="recQ"
                     /locus_tag="U0308_001013"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEM2315985.1"
                     /translation="MIEQARAILQQNFGYQDFRNGQVDVISKLCAGEDTLAIMPTGGG
                     KSLCYQIPALLFDGLTIVVSPLISLMKDQVDALVSEGIAATFINSTLTNREIDIRLDA
                     AFSGELKMLYIAPERIETPGFQRLIEQVPISLFAIDEAHCISQWGHDFRPSYLTLCDS
                     LDKMTRRPLVIALTATATQAVSDDICRLLKIGADSVVKTGFSRDNLAFQVVKGQDKDK
                     YLIDYLTKNVTESGIIYASTRKEVERLHTFLLKKGVESGMYHGGMTDLARKDWQEKFL
                     YDDIRVIVATNAFGMGINKSNVRFVIHYNIPRNIEAYYQEAGRAGRDGVPSDCILLFS
                     PQDSRIQQFLIEQSEMDDERKQNEFAKLRQMTGYGYTEICLQKYIVQYFGDDEENCEK
                     CSNCLDTREATDVTILAQQVFSCIKRMGERFGKVLIAKVLTGSADQKVKDWRFDELST
                     YGLMKDASQKDVLQLIDYLTAEKYLQPTDSQFPSLKLTDRAVSVLRGELKVERKQAKR
                     AEKVKIDVNSDLFEKLREVRRELAAKHKVPPYIIFSDETLREMCAYMPQTEDALLEVK
                     GIGAMKRDKYGAEFLAVLQQEASK"
     gene            23028..25181
                     /locus_tag="U0308_001014"
     CDS             23028..25181
                     /locus_tag="U0308_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HEM2315986.1"
                     /translation="MTKTLVLAEKPSVGKDIGRVLGAKQGKNGYLEGGKYVVTWALGH
                     LVTLADPERYDSKYKNWNMEDLPMLPEKMKLEPIKQTRKQYETVKKLMNRTDITTIVI
                     ATDAGREGELVARWIIDYAKIKKPLKRLWISSVTDKAIREGFEHLKPGKAYENLYHSA
                     VARSEADWVVGINATRALTTKYNAQLSCGRVQTPTLAMIQHREEEIRNFKPREYYGIT
                     ALTEQESFTWNNGQTFDKALAEKLVKSLQGENAVITDVSMKEKKNFSPGLYDLTELQR
                     DANNRYDFSAKETLNIMQTLYERHKVLTYPRTDSRFISTDIVPTLKERLAACGVGENA
                     KAARQISGKPIKANKSFVDNSKVSDHHAIIPTEQPVSLGDLSDKERKIYDLVVKRFLA
                     VLSDPYIYEETSVKAKIGQEEFTLKGKVVKSLGWKSIYGESREPDQLTKMKKGDTIPV
                     KRINLETGKTKPPARFNEATLLSAMENPSKYMETTNKALAKTLGETGGLGTVATRADI
                     IEKLFNSFSLEKQGKDIHITSKGRQLLELVPEDLKSPELTARWEQKLSKIAKGELDYR
                     KFTEEMRDYAKKAVTEIKQNDKKFRHDNITSQKCPDCGKPMLKVKGKRGTMLVCQDRE
                     CGHRESVSRTTNARCPNCHKRMEMRGEGDKQIFVCICGHREKLSAFQQRRDKQKNKNV
                     SKTDVAKFMKKQNKQEDEPFNNPMAEALAKLKLDK"
     gene            25290..26957
                     /locus_tag="U0308_001015"
     CDS             25290..26957
                     /locus_tag="U0308_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEM2315987.1"
                     /translation="MKHNQLIIETDVPAEMRDGVTLYADIYRPADAGEYPVLLTRLPY
                     SKSYGLHFIRPNILAEQGYVVIVQDVRGRYTSEGDFVPYIAEVDDGYDTIEWAANLPY
                     ANGNVGMFGLSYYGYTQILAAISGNKHLKAIAPIMAQNSMTDVFNDHDGALELGMWET
                     WNLESMLPNMLARTYKTQDELEEAVNTLMKNLDNLDALYQFKPYKDWPAIGQNEMPYF
                     SELLNYEPTHNHWQKIDAKSNYDKINVPGLHVAGWYDCFLDKTIANFQNGHLRGLGDK
                     LIIGPWTHANFTQMIGDRDFGMAGTKWGEANMHARHIEWFNHWLKKEPLPASAPVNYF
                     VMGLNDWKTAENWPPQNANMTPLYFKNEKVSAEFTPPTTSSEAKFSYDPENPVPSNGG
                     GTLHKALNADGPRDQQQIELREDVLCYSTEPLKEAIEVTGSIQVKLWAKSDAPNTDFT
                     AKLVDVFPDGTAFNLADGIIRAAKQHGDNVQNNINEYTIDLWATSNLFQKGHQIRVEI
                     SSSNFPRFDPNPNTGDNFINSTESQIANQTIYHSPEFPSHILLPIVR"
     gene            27136..28473
                     /locus_tag="U0308_001016"
     CDS             27136..28473
                     /locus_tag="U0308_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEM2315988.1"
                     /translation="MKNIIKKTGIVIMAASLAVSGFLVSPKAAQAAEAPNVNANAAIA
                     IEESTGKILYSKDADKLMGIASMTKMMDEYLLLEAIDKGQIKWDDKVTISEYAYKVSQ
                     DTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAIAISEKIAGSEKEFVDAMNKKADEL
                     NLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTARGMAKLAKHLINDYPDVLKTAST
                     TKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTGTTDYAGMCLTATAVQDGMRV
                     ITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQKAGSKVKNPSTIAVDKGK
                     EDTVGLVTKDAVKLVVPKNGNEPKLNTKVTMKEKTIEAPVKKGTEVGKMEVSLKDGDK
                     LGYVDGKQTETIDVLTASDVEKANWFMLSAQAVGSFFTGIGNYVSDGVKGWFN"
     gene            complement(28554..29501)
                     /locus_tag="U0308_001017"
     CDS             complement(28554..29501)
                     /locus_tag="U0308_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM2315989.1"
                     /translation="MGILNEKVAVLLPCYNEELTIGKVIDDFKKELPNADIYVYDNNS
                     KDKTFEIAKDHGAIVRKEMRQGKGNVVRSMFADIDADYYLMVDGDDTYPAEYCHEILE
                     VLRNKEANMVIGDRLSNGTYTEENKRNFHDFGNSLVRNTINRIFKSNLRDIMTGYRGF
                     DRYFVKTMPVLSPGFEIETEMSIHALENRFLVKEIEIDYRDRPEGSESKLNTFSDGFK
                     VIMTIVRLFKNSRPFLFFNLLASLFVLVGVLVGLPVIIQFAQIGLVLKFPSALLATGL
                     IIMGMLFFICGLILDTIAHRSRQSYFLELVKYRERNPLN"
     gene            complement(29512..>31234)
                     /locus_tag="U0308_001018"
     CDS             complement(29512..>31234)
                     /locus_tag="U0308_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2315990.1"
                     /translation="YFRQEKNFQFQWSTLITSLIISLFWMASSFNGGPYGGNFVFNSI
                     ILAGTFLVITIFVLLLLLEMRTEYKARPNRKVKWPFFALFTSIPFVVWMISFLAYYPA
                     KMTFDSYYQWGMAHGIRQYSQWHPLLHTLWIETTSAIYDSPSSYIFSQIIVVSLIVGF
                     AIYTLVKMGAHIWIGVCISIGYAIYPAAMFYSATAWKDFPFAAFILLFTVLILKIVQS
                     NGMWLKNWWHLIAFVLVAFVCINLRNNGMMIIIVSLLCLLIFMKNFRLIITGILVGTL
                     GLNFLFGLVMTNGLNAQPNPLNQALAIPSQQIGATFYNDGNFTPELKEYFTSILPEEN
                     WKKDYNPYTVDPIKHDTKYNSSVIEDDFGLYIKNWFKLLTANFGTYVGAYLDQTAVIW
                     QFYSPENYKVFFDTSANIQDTRYDVRAFAKFFPEGLSEEEINKLGYEVYQNEYKNATG
                     KDAVSYNEYKRRIDDSTNPLISISKAPSLKKITDSIYAKTTNEWQNYLLKGAIPLVLL
                     IIAIAAVCLQRPKKKLLIFAPVVMALITIAIAMPATDFRYSYSFIFTVPIVFFATKLK
                     NYKENQF"
BASE COUNT         9947 a         5347 c         6696 g         9244 t
ORIGIN      
        1 aaagaagcga taatcagtga taaagttttg aatattattg ttcctaatag taagaaggga
       61 ctagagaaag atataaaaaa cacttttctc gattacttct attttcaaaa agtagaagtg
      121 gcgaatattt ataacaaagc tttagacctg cctgctgtgg cgctaagtaa ggaagactta
      181 agtgttaata ttatttatgc agaaaataat caagattatt tttcctatga tagtaatact
      241 ggggatttta ggactggaaa tatcacggat ccaattgcga ttgtatatac gggaaatatt
      301 gactcatcta gtattggcgc tcatgtaact tcttctgtat attttattga taaatcgaat
      361 ggtgacgctt ttaacgctat cttaccactt attagtaatt caaatgcaag agaaattacc
      421 catgtaagga gtgtttatca agaagtttca agcgaaataa ctactttgaa atggcaaata
      481 tatcagcaat tgataggtac gattatctta gccctatgct tatgctcttt tatggtactt
      541 cttgtactgt cctattacgg ggagaactta tataagcaac taatttatca tgtatttggc
      601 tattcgtttt ggaaaagtag taaatggttt agtataagca atttgtttgt gagtgttttt
      661 tctggaatcc tcatttttat tcttagcaaa gaaccggttg ccctatattt tagcgttgtt
      721 attctcataa tagaactatg tgccatttat ttcataaagg aaaaagcgat ttataaagat
      781 tttaaagcca tactaaaagg tgaaaaatat gattgaatta gttaatgtca gtaaaaagat
      841 acaagataaa ttgattttgg aaaaagtctc tctttctatt ggagctggtg aatttattgc
      901 agtcgtcggc gagagtggta gtgggaagac cacgctgctg aatgttatcg gacacctaga
      961 ttcaaaagat agtgggcaag ttattattaa cgagatggaa tatcagccga aaaaagaggt
     1021 tatgactcta aaaaaagagg tgttaggttt tatattccaa aattatctat tgatggaaaa
     1081 tgaaacagtg ttagaaaact tatccattac aggtggaaaa aatcgcaagc tgatgataga
     1141 gcatttagaa gaagtaggaa tggatgaaag ctatttagca aaaaaagtat accaattaag
     1201 cggtggagaa aaacaacgga ttgctattgt gcgcatttta ctcaaaccat ttcagttatt
     1261 acttgcggac gaaccaacag gcaacttgga tgataaaaac aaacacaaaa tcattgaatt
     1321 atttttagcg ttgaaaaaac aaggtaaaac aatcatttgt gtcacacatg acccagaaat
     1381 atctgcaaaa gcagatcgaa tcatttacat tgaaggaggc gaaataagat gaaaattatc
     1441 ggtatttctt tagtaaatag tcttttaata ctcttagtgg tgcttattca taaaattttc
     1501 tttagggtat tattgcttgg atatgaaaac ttggttatct attggggctc ctttgtttta
     1561 atctatttca ttttaaattt aattacaaat aagatactgt tacctagggg aggaataatc
     1621 gaaaatagtt aagggtagaa tggttttaac aaaacccatt gacagcgatt tcatatggtg
     1681 gtactatatc catgaggctt gttaccggta atgcgggcaa taccagatat tagttttttt
     1741 ggctgatatg tgtggtattg ctctttttat tttgcttcaa ataggtggtg atttgtttga
     1801 gaattgagag gattttaaat aataatattg taagtgcgat tgacgaggat gcgcaggaat
     1861 tgctgatttt gggaaagggg cttggcttta attctaaagt tggcgatcca attaatgaat
     1921 cgaaaatcga aaaagttttt gagttgaaag atgacacaat ggataagttt aaaatgattg
     1981 taaatgaaat tccaatacaa tttttagaag taactgacga tattgtgaag cttttcaaaa
     2041 tgaaaacgac gaaagatatt agtgatgtca tctatatttc tctttcggat catctgtact
     2101 ttgccacgca acgtttgcaa gaaaacgtgg ttatcgaaaa tccgctctcg tgggaagtga
     2161 aacgctttta tcaggaagaa tacgcagtgg ccaaagaggc tgcgaaaatg gtggaaagta
     2221 agcttgaaat agagcttcct gatgcagaaa tttctaatat agcgctacat tttgttaatg
     2281 cggaagtaga tagtgatatg aacgacgtca cacacattat gcagttaatt caagaaatta
     2341 tttctattat taaatatcat tttaacattg aatttgatga agaaagtacg aattattatc
     2401 gttttatgac ccatctgaag tttttctgtc aacgcgtaat tattggcgag acaattgacg
     2461 aaatggatga atttctttat caaacagtga agaaaagtag aggcgctatt ttcgaatgta
     2521 ttgataaaat tggtgtgttt ttggaaaaga attatcaatt tacgatgagt cattcggaac
     2581 agttttatct ggcgcttcat attgaacggc ttttaaaaag aaaaaataac taataggctt
     2641 gttaccgcga tttgcgggca atacctggat gattgtatgc ttttttaggt gcatttcatt
     2701 caggtttttc tattatattt aggaggatta gcatggacta caatcaatta gcaaaagaaa
     2761 ttttacaggc agtcggtggg aaaaataatg tgaatgaagt ttatcattgc attaccagac
     2821 tacggtttca attaaaagat caatcgaaag taaatgaaaa acaattaaaa gatttggata
     2881 aagtgatggg gacgaatgtt gcggggaatc aattccaagt aattatcgga aatgacgtgc
     2941 ctaaagtgtt tgacgcatta gtgacagaaa atcctgcttg gaaaaacaaa gaaacgacaa
     3001 ataaaacgac acggcaaaaa ggaataaaag gatttttctc gaatatcttt gatgcacttt
     3061 cgggcgtgtt tgcaccaatt cttcctgcga ttgcgggagc aggtttaatc aaaggtttca
     3121 tggcattatt tgtttcactt ggttggttag caacagatac agaaacttac cgtatcttgt
     3181 tagctatcgg tgacggggta ttttacttct tgccaatttt agttgctgta agtgccgcgc
     3241 gttactttaa agcgaatatg tttgtcgcgc ttggaattgg agcggcgcta ctttatccgg
     3301 atttaacggc tttacttagt gcggggacaa cgccacactt tattgggtta ccagtaactc
     3361 cagtgacgta tgcttactct gttattccga ttttacttgc aatttggatt atgtcttatg
     3421 tggaaaaatg ggtggaccgg attattccaa cctcgttaaa actgttgttt gtcccattaa
     3481 ttacaatgtt tattgttgtt cctttgacgc ttgttgttat tgggccacta ggtacatttg
     3541 ttggagacgg tgtatctggc ggaattaact ggttattaaa taatggtgga gttattggcg
     3601 gtatcttgat tggtggtgcc atggccatta tcgttatgac tggtatgcac tatgcaattg
     3661 ttccatttgt tattagtaat ttagcaaaat atggttatga taaattttta ccgttaactt
     3721 atatttccaa tatgagccaa gcgggagcga ctttcggtgt atttttccgg gcaaaagata
     3781 aaaaactgaa atcattagca ttttcaactg gtttaactgc attaatgggt gtcacggaac
     3841 cggcaatgta cgggataaat gtggtatata aacgtccttt catggcgtcg ttaattggtg
     3901 gggctgctgg tggtggcttt gcaatgatgt ttggtgtaaa agcgtatgtc ttaactggta
     3961 acggtggtat tcctggactt ccaggtcttg tcggagatac ttttgtttat gcattaattg
     4021 cgatggcctt agcatttatc gtggctttaa ttttctctta tattttcggt attgatgagc
     4081 aaatagtaga agcaactcct gtagcagaaa aaatagcagc tgggacagaa gttttgcaag
     4141 ctccagttac tggtgaatta gtaaaaatga gccaagtaaa tgatactact tttgcagatg
     4201 aaattatggg taaaagtatt gcgattaagc caaatgaagg taaactttat gctccagcta
     4261 acggcacaat catttcgctt ttcaaaacaa aacatgcgat tgctatgcag tcagataatg
     4321 gcgctgaaat attattacat gtaggcattg atacagtgaa gcttgatggt aattacttca
     4381 cggcacatgt tgcgacgggt gatgtagtgg aacaaggaga tttattagta acgtttgata
     4441 tggaaaaaat tgcagaaaaa tatgatacaa caacgatgat ggtaattaca aatactaatg
     4501 aatatgcttt ggtagaagct aaggatagtg gaacggtaac gaaagggaat caagtaatgg
     4561 aattaaggag tgagcaaaat gagtaatacg aagtttccag atggctttat gtggggcggg
     4621 gcgaccgcgg ctaaccagtt tgaaggtggt tataatttag gcggaaaagg gcttgcctgt
     4681 gcggatttat tcactggtgg aacgcataca gagccaagaa gaattaccgc acaattagaa
     4741 gaatccactt tttatccaag tcatgaagca gtggactttt atcatcatta taaagaggat
     4801 attaagttaa tggcagaagc tggatttaaa gtgttccgga tgtccataaa ctggactcgt
     4861 attttcccga caggaaagga agcagagcct aacgaggaag gattacagtt ttatgaagat
     4921 gtttttaagg agctgaaaaa atatcagatt gaaccgttag tgacgattgc tcattttgat
     4981 attccgctag cattaacgaa tgaggtgaac ggctgggcgt cgcgtgattt gattgattac
     5041 tatcttcatt attgtgaagt gatttttaaa cgctataaac atttagtaaa acactggttg
     5101 acgttcaatg aaataaatac tgcaacaatg gaaattggga attatttatc gcttggcatt
     5161 cgtcatgcgg agggagattt ccttcatcaa aaagatgacc caacagtgag atatcaagcc
     5221 cttcatcatc aatttgttgc tagtgcaaaa gcggtaaaac taggccatag catcaaccca
     5281 gaattcatga ttggctgcat gattgcttat atgccacgct acccgcgtac ttgcgaacca
     5341 actgatgtct tgttggctaa gcaaacggaa gcaatgcaca gccatttctg cggcgacgtt
     5401 catgtcaaag ggtattatcc tttttatgca aaaacattct ttaaagataa tggtattgag
     5461 cttgaatttg acccagaaga tgaacaagtt ttgcgagaag gcacggttga tttttatact
     5521 tttagctatt atttaacgct ttgtgcatcc aacgatcctg cctataaaaa ttcgggaaaa
     5581 agtgttattg gaggggctga aaatccttat ttaaaaacaa atgattgggg aatgcagaca
     5641 gatcctgtag ggcttcggat tgcactgaat gatttatata ctcgctataa tattccgctt
     5701 atggtagttg aaaatggttt aggagccttt gataaattgg aagacgatgg gacgattaat
     5761 gatccgtatc gaattgatta tttcaaagaa catattcttc aaatgcataa agcaattcaa
     5821 gatggtgtag atttgattgg atttactatt tggggttgta ttgacctagt gagcgcatct
     5881 acaggggaaa tggccaaacg ttatggtatt atttatgtgg ataaatacga tgatggaacc
     5941 ggtgattatt cgcgtaaaaa gaaagcatcc tattattggt ataaagatgt gattagttca
     6001 aatggtgaaa ttggattgag agagtaatat aaaatcccag ctacgaaact agtagctggg
     6061 atttttttat tcaaataaga aatctaaaat cttatcacca atttttttct tctccccttg
     6121 ataagggaag cagtgcatgt gcatcgcggg attgaaatta agctcgatga tagcatgctt
     6181 atcacggtcg attgtttcac gtggaacaat tatgtctacg ccgcaaattt tggcgtcaag
     6241 tacttgtgtc gcacgaatag ctatctcttt gaagtaatcg tccatctctt cagtatagtc
     6301 aatgctgtct ccacctgtgc tgacgttgga gttttcgcga aggtagataa tctcttctgc
     6361 tttaggtatg ctgtcccaag aaaggttttg catagagagc atgagcgttt cttctggacc
     6421 agtacggatt ttttcaagtg gtttcaaatg gtctgttccg cgcaaaggat cagtgttctt
     6481 ttcttcaacc agctcgcgca ctgtatggat tccgtcgccg gttacgttag cggggacacg
     6541 ttttagtaca gcttcaactt tgtcgttaat aactaagaag cggaattcgt cgccaggaat
     6601 gaactcttcg ataataacgg agctatcata gctaaatgcg atatttaaag cttcttggta
     6661 atcttccagc gtgaatttat ttttaaaaat actgataccc cacccgtagt tggtggattt
     6721 tggtttaacg acaatttgtt tatcctcaaa tagggagaaa gcttctagtg caagggcttg
     6781 gtcgctaaaa ctgtcgccaa atggaacgcg aatatcatgt tctgcaagta caagtttagt
     6841 aactacttta ttttccatca ttaaaacgga aacgtagttg tctttggatg ttttgctcgc
     6901 ttgttttaca tactccacat ggtcgccttt ttggaagcga aggaagtttt cggcccggtc
     6961 taatacatcg actttgatgc cgcgcgcgat ggcgtctttc caaatgattt gggtggaaag
     7021 ctccatgtct tctgcgccaa tcaatttgta ggctaaagct tcggtttctt ccatgtaagt
     7081 tttggcttgg tttaaatgga agtcaacgta gccttctttt gttacttgtt gtttcacttg
     7141 tgcagcaatc gttttttcag ggtgtagcag acgttctttt tgtttttcga tgattgcttg
     7201 gagtttggtg tcttctggtc gcaagctttg gatgaaatcg ctcatcttat taagctctaa
     7261 aagcccggcc tctacgacag atatttcttc attatcacaa tttttaaggg caggttgcgc
     7321 gagaccattt agcgcaatat tattttcatt ttcatcggct aattgttggt tgttggagca
     7381 taattcgcga tcttctgaaa gcaaaccttt aattaaaaat aggtgaataa aagcaagctc
     7441 gtctttagaa ataccattcg actctaatgg attcagatca atagagcgaa tttctaaata
     7501 ttccacgccg tgctccgcta aactttcgac tgtttggtcg gtatgcgcat ttttcaaacg
     7561 aatcgggttg taaaattcac gcatactctc gattttccct gcttcgatat agttagagat
     7621 gctagaaata taagcgtcga aagaattgta atcaacgtaa agagcttctt tgtttttata
     7681 accagcatta ctatttcgaa gagaaattcc atcacgaagc gcgctactac cgtccggaag
     7741 ggattcatcg tgcttcgttt tcgagaaatc agcaaggtaa accggacttg cgccagttaa
     7801 ataaataagc aaccagcgat ttttcataaa gtattttgcg acttttaaat atagccgatt
     7861 tttaaaatct tgctttgatt cttctggaag actaattttg tcataaagcc cgtcaattaa
     7921 agcttctggg aatgagaagt tataatgaat gccagataat aattggattt ttttaccgta
     7981 gccttttgct aaatgttcgc ggtattttct gtccgggcta tcaggcgttt tatattcagc
     8041 aattggaata tcttcttcgg ctggtaaaat gggtggattg ctagacggcc aaagtagttc
     8101 gttttctgag cgcaacgaaa cgatattatg aagattttca agccattcat atacagagtc
     8161 aatcgagtcc gttaccgggg taatcatttc aatctgactt tccgaaaaat cggttttaat
     8221 atatgggtta tcctcttttg gaccaaaaat agcgggatgt ggcgtaagag ccaattttcc
     8281 atcagaagtt acgcgaatat tttctttttc taaaccaaaa tgtccagaaa ataaaagctt
     8341 ccggagctta gggtcttctt taaaagaatc aagcatggtc atatcaagtt ttatcatgtt
     8401 ttcacctcag gggttttaaa taagttcata tagggatatt ttaccgcaat atgtgaaatt
     8461 agtataatga ttggtttgta actttttata gcgaattggt agaaaatttt taaaaatgta
     8521 gaaaaaatat tccggagctt atataatgag tgaaagaggt ggaataatga aaattcggaa
     8581 cttaactaaa aagatggacg ataacttggt tttgaaggat gtttcatttg atttaaaagc
     8641 aggggagatt actgcattaa ttggccgcaa tggcgttggg aaaacaactc tattttcaac
     8701 gatgacggga atttatttgc ctgatgaggg cgatgttttc ttaggtgaag agagtatttt
     8761 taagcacccg gaagtgaagc aacagctgtt tttcttggaa gataatatga atcattttaa
     8821 tacatatagt gtacagacgg ttgttaagat atatcgacaa atttatacga cttttgatga
     8881 ggcttttttt aatgaattaa tgcagcgatt tgaactgcca atgaaggcta agttaatgtc
     8941 tttttcaaag ggacggaaag ccttattttt tattatttta gctgtttcac ttaatgttcg
     9001 attcttgctg ctagatgaac cgatggatgg gctagatatc attattaaaa agcagatttt
     9061 agcaacgata aaggacacgg tgaaaaaacg aggaacaagt gtagtgattg cgtctcatcg
     9121 tttggaagaa ctcgaggcta ttgcggatcg agtgattgtt ctaaagggcg cgagcgtgga
     9181 actggattat tatttagaag atatgcggac cgatgcggtg aaaatacaag ttgcatttaa
     9241 aacgaaaaaa atacctgatt ttgtgaaaaa taacgcgcaa ttattgtatc gtaatgggcg
     9301 gatttacacg cttctagtga ctgaaaatgc tagcagtttt cttgccgaat tgcgtttaga
     9361 agaaccggtt ttgctagaag aaatgtcgat ctcgatagaa gacattttca cggtgcattt
     9421 agcaaatgat aaaatagatt attacgagat ttaaaacaga caggagggac aaggctaata
     9481 atgtttaatc gaggtttatg gtaccgagaa tggcgtaata tgagatggat gcttttgggt
     9541 gttgtgatac tatttttctt aggaattact ttgggactaa tgtcagacgc agatagatgg
     9601 aatagtcaaa aagagtacta cgaatcaagt gagtttttaa agcaacagaa agaaaatcct
     9661 gaatttaaaa cttctgatga ggaaatgaaa gctagtttga cagtggcgta tttagcggtt
     9721 ccaatgtata caaattttgt tcaagatgag tttgtagatt acatgccatt tatgttttat
     9781 tttcaagtag aaatgttttt tacattgatt aaggtgagtg tttttatttt aggggttttg
     9841 gcagttattt ttgagcgcta cacaagagcg aatcgtttta cggcatcatt accatataaa
     9901 cggacgcaca tagttggggt taaaatgatg atgggaatag cgaccattgg gctgagttat
     9961 cttatctcga tgggaattgg gttgacatac ttcatgtcgc atgttccaaa agaatatatt
    10021 caattagatg caccaaaatt ttgggtggat atagttggtg gattatttac ttatttactt
    10081 atatttttag tagctatttt aatcggttta ttgataggtt cgcctattgc tgcggctttt
    10141 gtggcatttg gtgtgatgtt actgccgagc gtgttaaatc ctactttaga taacatgtat
    10201 aactttattt ggccgcatgg cggagataaa gggatgtcta aactgctacg atttgaggat
    10261 tatgtgaaca tattttctcc gttttcgttt gagtccgcct cgtttggggc tgtgattttt
    10321 agcgtaatat taagtgtact catggtggtt gctattttaa tcttatataa gaagcagcat
    10381 attgaacgaa gtggttattt atttgcattt tcttgggtta aatggccgtt tttagtgttg
    10441 ttttcgttat ttgttgggat gactgcagct aatttggcag taacagatac agagcttggt
    10501 ttcgttggct atttagcttg gggaattggc gcgacgattg gtagttttat tttagcactc
    10561 tacattttaa acaaaatgcg cgggcttttt caattgtcta aaacgaatta aaaaaatagc
    10621 ttttttatag caggtaagtc cggtataata gaggatagaa tgagcgaggg aggatttagc
    10681 attgacgaca gaaacagaaa cgattaaacc gcagttagct gaattgaaag ctaatttaac
    10741 gaagcggaac ttgcaatatg tgatggaagt agaaaaacat ttgcgagaaa ctcattacag
    10801 cgcagaacaa caagagatta ttgtttatga aatgagcgaa aagattttag ccgaacagaa
    10861 aaaaggcata acagcgagaa aattatttaa tttaacacca acagaatatg ttgtttcttt
    10921 agatgtgaaa gctgctacag tggagcaaaa tacggacaaa tggtggctag tacttgacgg
    10981 tggactcctt gtacttggag cgatgatgct gatttccgga attagtgctt atttccaaaa
    11041 aaacgcgcag actttaggaa ttatcgtgtt attaatcact gcagttgtcg gtggtttcgc
    11101 aatgcttatc ttgcgtaaat acgcttcaaa catgcgtgca ggccaaaaag gtggaacgat
    11161 aaaatactta ctagtagcag ttggagtcat tgcagtgtgg atgtttgtaa tgacgattgt
    11221 acaagtaact attcctccaa atatcaatgt agcgttaagt ccgattgtta acacagttgg
    11281 tggtgcaatt attattgccc tacgtttcta tgtgaagaaa aagaaaaata ttccatcctt
    11341 ataataagat ggacacggac aggtgaccta gattgcataa tgcgagttgg gtcgcctgtt
    11401 tttatttccc gggaaatact gatacagatg aggtgaataa acttatgttt tcgtatgaag
    11461 tgattagaca atttacagag acagagcatc atttataccg gtacataatg gacaatcggg
    11521 acaaagttat gtttatgaga gtgcgcgagc tttcggaagt gacgcacgtc tcgccggctt
    11581 cgattgttcg atttacaaga aaattaggct gtgaaggctt ttcggaattt aaagtgaagc
    11641 taaaacaaga agcgactcgt gaggtaaaga aaaaaaccgc ggatacagtg gaagttttag
    11701 aggaattctt tgaacgaaca atgaaccgtg attatgatca tgtgttagac gcggcggcgg
    11761 agatcatcaa tgaagccgat ttagtcgtgt ttttcggaat tgggacttca gggattttgg
    11821 cagaatatgg cagtcgtttt ttctccaata tgaagaagcg gactttttat attaaagatc
    11881 cattttatcc taacccggga gagcaattta aaaataaagc agtgatgatt atcctttctg
    11941 tgtcaggcga gacggatcag gtgcttgagc aggcgcaaaa tatgcagcag tatggcagtc
    12001 ggattattag tataaccaat acgagccaca atacgctcgc gggcttgtct gatgttaata
    12061 ttccgtatta tgtaactcaa gaaatggttg ataagacgaa tattacgacg caaatcccgg
    12121 tacttttttt actggaagcg atggcgaaga aaaattataa tcaagagcaa gaagaataat
    12181 aaaaagcgtg taggttttca tgacctacac gcttttcttt agcttatttt tttatataca
    12241 tgcacgaact cagtgacaac ttctcttaaa gtttcggttg tgatgagtaa gtcttccgca
    12301 tggattaaaa gtaattggat ttccactttt tcaccggaag cttctttttg gattagctta
    12361 tgatgctcgt ggtgcccatt tgcaagagtt tcgctacctt cttgtagttt tgcttctgct
    12421 tcctcgaaat tgccttcacg agccgcacga agcccttcta agtaactgct tctcgcagaa
    12481 ccaacttggc taatcatgcc aaaaattact gtttccattt cattcatgtc tattttcctc
    12541 ctgtaaaaag tgatacactg cgccgagtag gccagcttgg tttttatgtg ttgctgtttc
    12601 gataattgtg tcacgcagcc caaagctctc catatgatgc tttagctccg tgataaaagt
    12661 agggcgactt gtaattccac caccaataaa gatatgcgtt ggatcgaaca agtaaattaa
    12721 attataaagc cccgtacaaa ttccagtata aaactcagta ataagacgtt ctgagacggc
    12781 gtcgtgtcca tcatacttag caaaaatttc ttcgccagta atctcttcca aagggcgccc
    12841 agtaagttcc gcgtattgtc tgcgaagaac aagcattgtg gtagtctcat ttagcgtata
    12901 tttgccagga cggaaagccc ctggacgttc actaaacata taaccaaact cgccagcccg
    12961 gaaacgacca ccacgaacta atgcgccatt agaaaaaata ccgccgccaa tcccagttcc
    13021 gattgttaga caaagaaaat catccaaatt ttgtccttta ccaagccatt tttcggcaag
    13081 aagggcgcaa ttggcgtcat tttcaatggc aacaggaatt ccggtttccg cttcaagcca
    13141 ttctttcaaa ttaaagttat caaatctacg gatagcgccg cccattgtaa taagtccggt
    13201 ttttgggttc acatagccag gcgcgctgac tgcaattcct gtcacgtccg tattttcagc
    13261 aagaaatagc ttcatttctg ctaaaatctg gtcgccatca ctagcgatta tttcggctga
    13321 ttttgttagt ataatttcac catgcggcaa aacgaccccc attttaaggg ccgttccacc
    13381 gatatcaaaa gctgcaattt tcattttgtc acatcctatt gttccgttga ggctgttgca
    13441 tttttgtcca ttgcagcatc actcgcggca attttgttag atacaagtac gaatggtaga
    13501 taaatgactg tcgcgacggc tagacagagc aagccgacca gaagcgcgag ccagtttcct
    13561 cctgtaccaa gaaatggaat cagtggtcct ggagttgtcc aaggcacttg ataggcgaca
    13621 ggtggaataa gttttgttga gataaagaag taaccaatta atgtattgat tgctggtgta
    13681 atgatgaaag gaataaccat aattgggttt aatacgattg gtaaaccgaa aataactggt
    13741 tcattgatgt tgaaaatccc tggtgcaaga gaaagtttcg cgatatcgcg gtagtctgca
    13801 cgacgagaag cgataaagat agcaatcagt aaacctagag tcataccaga tccgccgtag
    13861 tttgcaaatc cgtcatttag gccagcccat gttgctgggt atggagctcc ccaagcagaa
    13921 ccgtgctgtg ctacgtaaga taagttgtct aagtttggtt cagtgaagat ggtgtcacga
    13981 atagccgcaa cagtgttagg cccgtgaata ccaagaaccc aaagtaagtt agaaacaagc
    14041 ccgatgataa ttacagagaa tacgttagtt cccatgtctt taagtggcgc ttgaataact
    14101 gtgtaaacaa ggtcgtttaa accttctgga gcgattaaag tgattaagta gttaatgaca
    14161 gagaaaagaa tagtgatgat gataactgga attaatactt taaaagaacg agcaactgct
    14221 ggtggtactt ggtcaggcat tttgatcatt aaacgagggg atctagctag acggctaaat
    14281 acttccccag taataatcgc tacaataata gcaacgaaaa gaccttgtgc tcctaagaat
    14341 ttgattgtca tgtaagatgc attgtcaact actgtgtaag gtgtatacac gataaagaat
    14401 gcacctatcg aggtaagtcc acagagcaaa tcatcctgtt taaagaagat ggcgagattc
    14461 cgtgcgacta agaatacgat cagaatggcc ataatattgg tcgaaccttg cattaccggc
    14521 gaaaatacag cctgtgcatc ggctaaatta gggaaaattt tccctaggaa taagattttt
    14581 gcaataaagc catctggtga taatactgcg aagttaatca aagtgataat tgaaccagcc
    14641 ataattaatg ggaaaactaa aataaatgca tcacgaattg ctgcaatatg gcgctgcgag
    14701 ttcaatttat tcgcaactgg tactaaaaca cgttccatgc cgtgttcaaa ttttgacatt
    14761 atactcattt taaaacctcc ctattttgaa tgaatctccc ttaaccaatc tccgcgaaag
    14821 ctttttcaag aacggctttc ccgtttaaca taccataatc tttcatatcg ataacaataa
    14881 caggaatgcg accctgtacg agttcatcta cttgcggttt ttggtaacgg acttgaggtc
    14941 caagcatcac gatatccatt ttgtccacaa cgctgctagc ttctgatact ggtaatgctt
    15001 cgatttcaat ttcttcccca atagaggttg cgtgcgcttt cattttagta acgagtaagc
    15061 ttgtcgacat tccggccgca catacaagta atattttttt cattaaaatt tccctcccaa
    15121 aatggttgaa gcagagagaa caaggcttat ttgccctgtt cttctactaa attagctccg
    15181 tttgcttcga tggtcttttt ataccagtaa aaactatctt ttttatagcg ttttaattct
    15241 ttttcatcgt tttcgtcgcg gtctacatat acgaaaccgt aacgtttttg gtagccgttt
    15301 aaccagctta gtaaatctgt gaagctccaa gtgcagtaac cgagcatctc tacgccgtcc
    15361 gtgattgctt cttggattgc tagagcatgc gcgcgaatgt attcaattcg gtactcatca
    15421 tggattttat ggtcttccgt caagctatca tactcaccaa gaccattttc tgtaatcatg
    15481 attggtaatt tatagcggtt agtaattcta cgtaagccaa tgcgcaagcc agttggatca
    15541 atatcccagt cccaattcgt tttctctaag tatggattat tggtgttttt gtataacccc
    15601 ggtacaccag tttcctcgga agtgcctttt tcgccagttg tattcatttt cccagaacca
    15661 acgccgtctt tcccattaaa tgcatgagtc attgagcggt aatagttaac tcccatgaaa
    15721 tcaggttttc cttttttcag aagctccgta tcgcctggta agatttccgg tgcaagaccg
    15781 tgctcttcta gccagttcca agtagcagtc ggatattcac cccatgtgta aacatccatc
    15841 cagaaatggg cattgaattc ttcggagttt tcagaagcta atacatttgc tgggttagca
    15901 tcgatggagt aacttggtcc ataagcaaaa cttggtccaa tttttccgga tgtacctagc
    15961 tcgcggaatt tagcaattgc agaagcattc gccaagttcg cattgtgatt tgccgcaaac
    16021 atacgcttgt cgtcagaaac gccaggtggg tgatacgcta atttgtaacc gtgtgagata
    16081 aatacgttct gttcattaag tgttacccaa tatttaactc ggccgttaaa gcgttcgaat
    16141 agaagggcag cgtagttagt gaaatcttct acgacttttc gcgactccca tccaccatat
    16201 tcgtcttgaa gcccttgcgg aatatcccag tgataaagtg taacgactgg ctcaattcca
    16261 taagaaagaa gttcatcaat caaattatca tagaatttaa gtcctgcttc gttaacttcc
    16321 ccgttaccat gcgggataac gcgactccat gcgacagaga aacgatatgc ttttaggccc
    16381 tgttcagcca ttagtgcgac atcttcttta taacgatggt aattatccac cgctacatct
    16441 ccgtttgttt ctttgaatgt tgttccagga atacgaacaa attcatccca tacagatggt
    16501 cctttgccat cctcatccca ggcaccttct acttggtacg ctgcagaagc tgatccccat
    16561 agaaaatctt ttgggaaagg tttcaactta ttatgttcca ttatggcacc tccaaaaatt
    16621 atgtgcgatt agtctgtttt agttttgctt gccttattaa tgtaaacggt ttcgactaat
    16681 tggtaaatag attttggtgc tttgggttcg tgtttcatat caatggtata agtttctgag
    16741 ctgaaacgct gtgtttcgtg catgtgattg gaagaacaat tgacatttgg ggaagtatcc
    16801 cttattctat atgtattaat gaaaagaggt gagatgacat gtttcttttg aatgcgcgaa
    16861 ctagtatagc taaatttttg tatattgtcc gtgcaatttt ttccggtatt gcagttacat
    16921 tggcgaagtc tgcccaaaaa actgtataac tagaaaaaat gagagaagca tggagtcacg
    16981 caatcggttt gtatagtgct aaattagtat tatacttata attggcgtcg ggcgcttgtc
    17041 tgacgctttt tttgttgtct gaaaaattgt ttcacgtgaa acaatttgcc atgcttcctt
    17101 ggataaatgg aggataaaat gacaatagta gcaatgaatg atgtagttaa aagttttacc
    17161 ggagatatta ttttagagaa agtatcactt caattagaag aaggtgagcg cgtcggttta
    17221 attggtcgta atggcgaagg gaaaagtact attttgaaga ttttaaaagg aactgagggc
    17281 gttgatagcg ggattgtgac gagcaaaaag ggcgcgaaaa ttgggctttt agagcaatta
    17341 tcgacggtgg atcccaatat aatagtagaa caatatttac gaactagttt tggtgagtta
    17401 gaggagctgg aaaaagaatt acgagcatta gaaggagaaa tggcaacaaa ttccagcgaa
    17461 aaattaatga accgctacgg agataaaatg gctttatttg gcgagcttgg cggctatgag
    17521 atggatgcca atttgaataa agtggtgaat gggcttggta ttggattgct actgtcgcaa
    17581 cgatggggag acttgagtgg tggtgagaag acgaaggctg cattagcgca tttattatta
    17641 cagaaaacag atttattact cttagatgaa ccgacgaacc atttggattt gatggcggta
    17701 gaatggctga ccgcgttttt acaacattat tcgggaaccg tattagttgt atctcatgat
    17761 cgctactttt tagatgaagt agtcgggaaa atggtggagc ttgagaaccg cgaattaatc
    17821 gtttatcata cgaatttttc tggatatttg aaagaacgag aagaacggct attgcgggaa
    17881 ttccaagatt acaaagacca acaaaagaaa atcaaaaaga tgcagcaagc catcaaacga
    17941 ttgcgccagt gggcaatgca agccaatccg ccaaatgatg ccatgttccg aagggcgaaa
    18001 aacatggaac gcgcattaga acggatggaa aaagtaaagc gtccagtgtt aacgcaaaaa
    18061 caaatgcaat tacaattcga tgaagctggt cgaagtggac aagaagttgt ggttatggaa
    18121 aacttaagca agtcatttag cgaaaaagca atcgtacaag atgtttcttt gcaaattagg
    18181 caaggagaac gagtagcgat tatcggtgaa aacggcgccg gcaaatctac tttgcttaaa
    18241 ataatggaag ggaaagttgt tcctgatgtt ggcatgatta aggttggtgc aagtgtgaaa
    18301 atcgcgtcgc tttctcagca aatggaagag ctgaatgaaa agctgactgt actggatgca
    18361 tttcgggata aggttgctgt gacagaagga gaagcacgac aaatgctagc aggcttcatg
    18421 ttttatggag agatggtttt ccgaaaagta gggaacatta gcggcggaga acgtatgcga
    18481 cttaggttag cgcaatttat taatatgcca gtgaatacgc tgatacttga tgagccgact
    18541 aaccatttag atatcgcctc gcgtgaaatt ttagaagaag caattcgagc atttagcggc
    18601 acaattatca ctgtatcgca tgatcgctat tttattgatc agctatgttc taaagtaatt
    18661 tggctggaga ataaacaatt aaccgtttat gaaggtaatt acagttatgc aactagtaag
    18721 cgaagataat cgacttgctg gaaatcactt tcaaaataaa ttagaatgaa gaaaagaggt
    18781 gatggtatgg agataacagt tgtaaaaggt gatattacgg aacaagatgt agatgtcatt
    18841 gtaaatgctg ctaaccccgg acttttaggt ggcggcggag tggatggcgc tatccatcaa
    18901 gcggcgggtc cggatttatt aaaagaatgt caagaggtta ttaatcgcat tgggacttgt
    18961 cctgcgggtg aggcggtcat tacgtctgcc ggcgatttac aagcaagtta cattattcat
    19021 gctgtaggtc cgatttggaa agacggagag catcaagaag cgaataaact ggcatcttgt
    19081 tattggaaag cgctagattt agcggctgga aaagaattaa cttcgattgc atttcctaat
    19141 atttctacgg gtgtgtatgg ttttcctaaa aaactagcag ctgaggtagc gctttatacc
    19201 gttcgcaaat gggcggaaga agagtatgac acaagtattg aagaaatacg ctttgtttgt
    19261 ttcgatgaag aaaatttgaa gttatacaac aaattaataa acagtgaagt cgtttaagat
    19321 aacaatctta ggcggctttt tcaaatgttt cacgtgaaac attttttact atattttctg
    19381 aataaaacaa caacggaaaa ccttcttgac atagctccaa gcttcttgta acatcatatt
    19441 caataactaa aaatatacat tggctatttc agcatgatta tagaagacaa gtcgcatgat
    19501 gtggatattt tccaccattt tttctttatg aaaataagga taagatgatg cgttttttct
    19561 atataaaaaa gcgagtacca ataaaaaagg agtgtttgcg acccatgtgg gaaacaaaat
    19621 ttgcaaaaga aggcttaaca tttgatgatg ttttacttgt tccagcgaaa tcggacgtat
    19681 taccaaatga tgtagattta agtgtagaaa tggctccatc actcaaatta aatgtaccaa
    19741 tttggagtgc cggaatggac acaattacag aagctaaaat ggcaattgca attgcgcgcc
    19801 aaggcggaat cggtgttgtt cataagaata tgagtattga acaacaagcg gaagaaatcg
    19861 agaaggtgaa acgctctgaa agtggcgtta ttattgatcc attttatctg actccagatc
    19921 accaagtttt tgctgcagag catttgatgg gtaaatatcg tatctcaggt gttccaatcg
    19981 tgaacaacga gaaagagcgc aaactagttg ggattttaac taaccgcgat ttacgtttta
    20041 tttccgatta ttctacagta attaaagatg ttatgacaaa ggaaaaccta gtgacagcgc
    20101 cagttggaac tacgctaaaa caagctgagc agattctgca aaaacaccgc atcgagaaat
    20161 tgccacttgt tgacgaagca ggtattctaa aagggcttat cactattaaa gatattgaaa
    20221 aagtaattga attcccgaac tctgctaaag acaagcatgg tagactactt gccgcagcag
    20281 ctgttggaat tacgaatgat acttttgtac gtgtagagaa attaatcgag gcgggtgttg
    20341 atgcgattgt tattgatact gcgcacggac attcagcggg agttattaat aaaatttccg
    20401 aaattcgcca aactttcaaa gatgtagtaa ttgttgccgg aaacgttgca acagctgaag
    20461 gagcacgtgc tctttttgaa gttggcgttg atatcgtcaa agttgggatt ggtcctggtt
    20521 ccatctgtac gacacgtgtt gttgcaggcg ttggggttcc tcaaattaca gcgatttacg
    20581 attgtgcaac tgttgcgcgt gaatttggta aaacaattat cgcagacggc ggcattaaat
    20641 actccggtga tatcgtgaaa gctctagctg ctggaggaaa tgcggttatg ctaggaagta
    20701 tgcttgctgg aacagacgaa agccctggtg aaacagaaat tttccaaggt cgtcaattca
    20761 aaacttaccg tggtatgggt agtttggcag cgatggagca cggttcaaaa gatcgttatt
    20821 tccaagcaga tgcgaaaaaa ttggttcctg aaggtattga aggtcgcgtt ccttacaaag
    20881 gctccgttgc tgatattatc ttccaattag ttggcggtat tcgttcaggt atgggttaca
    20941 ctggctctcc tgatttaaga catcttcgtg aagaagcagc attcgttcgt atgactggcg
    21001 ctggactccg tgaaagccac ccacatgata ttcaaattac aaaagaagca ccaaactata
    21061 gcatttctta aggtcgaaaa agcaggaatc tcttccaaaa gaggtttctg cttttttatt
    21121 tctactataa aaataagaaa gctgcgagaa aacacgaatt tctccaaaaa gcttcaatta
    21181 aagtcataaa accgctatac tgtttctata gaggaggcgt gaaaaaagat aatgatagag
    21241 caagcaagag ctattttaca gcaaaacttt ggttatcaag attttcggaa tggacaagtt
    21301 gacgtcattt cgaaactttg cgcgggagaa gatacgctag caatcatgcc aacgggcggc
    21361 gggaagtcac tttgttacca aatcccagca cttctttttg acggtttgac cattgttgtt
    21421 tctccactaa tttcacttat gaaggatcag gtagatgcgc tagtctcaga ggggattgca
    21481 gctactttta ttaatagtac actgactaat agagaaatag atattcgact ggatgctgca
    21541 ttttcaggtg agttaaagat gctttacatt gctccagaac gcattgaaac gccaggtttt
    21601 cagcgtttaa ttgagcaggt acctatttca ttatttgcga tagatgaggc gcactgtatt
    21661 tcgcagtggg gtcatgattt tcgccctagc tacctgacgc tgtgcgatag tttggataaa
    21721 atgaccagac gtccgctcgt tatcgcgctt actgcgacag cgacgcaggc tgtttcagac
    21781 gatatttgcc gattgctaaa aataggagca gattcagtcg ttaaaactgg attttccaga
    21841 gataatttgg cttttcaagt agtgaaaggg caagataaag ataagtattt gattgattat
    21901 ttaacaaaaa atgtaacgga atccggaatt atttatgctt cgactcggaa agaagtagag
    21961 cggctgcaca ctttcttgct aaaaaaaggt gttgaatctg gtatgtatca tggcggaatg
    22021 accgatttag cacggaaaga ctggcaagag aagtttctat atgatgatat tcgagtgatt
    22081 gtggcgacga acgcgtttgg aatgggaatt aataaatcta atgtgcgttt tgttattcat
    22141 tataatattc cgcgcaatat tgaagcgtac tatcaagagg cgggtcgtgc tgggcgagac
    22201 ggggttccaa gtgattgtat cttgttgttt tccccgcaag atagccgcat ccagcagttt
    22261 ttaattgaac aatccgaaat ggacgatgag cgcaaacaaa atgaattcgc caagctacgc
    22321 caaatgacag ggtatggtta tacggaaatt tgtttacaga aatacatcgt gcagtatttt
    22381 ggagacgacg aggaaaactg cgagaaatgt agtaattgct tagatacaag ggaagccacg
    22441 gacgttacaa ttttagcgca acaagttttt tcttgtataa aaagaatggg tgagcgtttt
    22501 gggaaagtat taattgccaa ggttttgaca ggttctgctg accagaaagt gaaagattgg
    22561 cgctttgacg aactcagtac ttatggattg atgaaagatg cttcccaaaa agatgtgtta
    22621 caactaattg attaccttac agcagaaaaa tatttacaac caactgatag ccaatttcct
    22681 tccttaaaac tgacggatag agccgtttcg gttttacgag gtgagctaaa agtggaaaga
    22741 aaacaagcga aacgggctga aaaagttaaa atagatgtaa atagtgacct tttcgagaag
    22801 ttgcgggaag tgcggcggga actggcagca aaacacaagg tgccgccata tatcattttt
    22861 tcagatgaaa cgttacgtga aatgtgtgca tatatgccgc aaacggaaga tgcactgctt
    22921 gaagtcaaag gcattggtgc gatgaaacgc gataaatacg gtgcagaatt cttggctgta
    22981 ctgcaacaag aggcatcgaa ataaaataga agagagggtt ttgacagatg acaaaaacat
    23041 tagtactggc agagaaaccg tctgtcggta aagatatcgg ccgggtactc ggggctaaac
    23101 aaggtaagaa cggctattta gaaggtggaa aatatgtagt aacttgggcg cttggacacc
    23161 ttgtaacact agctgaccct gagcgctacg attcgaagta taaaaactgg aatatggaag
    23221 atttaccaat gcttccagag aaaatgaagc tagaaccaat caagcaaacg agaaagcaat
    23281 atgaaacggt taagaagtta atgaaccgta cagatataac cacgatcgtt attgcaacag
    23341 atgcaggtag agaaggagaa cttgtagctc gctggattat tgattatgcg aaaatcaaga
    23401 agcctctaaa aagactatgg atctcctctg taacggataa agcgatacgt gaaggcttcg
    23461 aacacttaaa accagggaaa gcttatgaaa atctgtatca ctctgcagtc gctcgttctg
    23521 aagctgactg ggtggtagga atcaatgcta cgcgtgcgtt gacaacgaaa tataacgcac
    23581 aactttcctg tggccgagtg caaacgccaa cccttgcaat gattcaacat cgtgaggaag
    23641 aaattcgtaa ttttaaacca cgtgagtact atggaattac cgcgctaacc gaacaagaaa
    23701 gtttcacgtg gaacaatggg caaacttttg ataaagcttt agcagaaaaa ctagtaaagt
    23761 ctttacaagg ggaaaatgcg gtaatcacag acgtttctat gaaagaaaag aaaaatttct
    23821 caccaggttt atatgattta accgaattac aacgcgatgc gaataataga tatgattttt
    23881 cggcgaaaga aacgctgaat attatgcaaa cattatacga gcgccacaaa gtactaacgt
    23941 atccacgaac agattcgcgc tttatttcaa cagacattgt cccaacacta aaagaacgtt
    24001 tagcggcctg cggggtgggt gaaaatgcaa aagctgctcg tcaaatcagc ggaaaaccaa
    24061 tcaaagcgaa caaatcattt gtagataaca gcaaagtgag cgaccatcac gcaattattc
    24121 cgaccgagca acctgtttcc ctcggagatt taagcgataa agaacggaaa atttatgacc
    24181 ttgtcgtcaa acgcttttta gcagtgcttt cagacccata tatttatgaa gaaacctctg
    24241 ttaaagctaa aatcggccaa gaagaattca ctttaaaagg taaagttgtc aaatcccttg
    24301 gttggaaaag tatttacgga gagtcgcgcg aaccagatca attaactaaa atgaaaaaag
    24361 gcgacactat cccagttaaa cgaatcaatt tagagacggg gaaaacaaaa ccaccagcga
    24421 gatttaacga ggcaacttta ctttcagcta tggaaaaccc atctaagtac atggaaacaa
    24481 cgaacaaggc gctcgccaaa acactgggtg agacaggtgg acttggaaca gttgcaactc
    24541 gtgcagacat cattgaaaaa cttttcaata gcttctcctt agaaaaacaa ggcaaggaca
    24601 ttcatattac ttccaaagga cgccaattgc tagaattagt gcccgaagat ctgaaatccc
    24661 cagaactaac ggcgcgttgg gaacaaaaat tatctaaaat cgcaaaaggc gaactagatt
    24721 atcgtaaatt cactgaagaa atgcgtgact atgcgaaaaa agcagtaact gaaattaaac
    24781 aaaacgataa aaaattccgt cacgataaca ttacttcaca aaaatgccca gactgcggca
    24841 agccgatgct aaaagtgaaa ggcaaacgtg gtacgatgct agtttgtcag gaccgtgaat
    24901 gcggtcatcg tgaatctgtt tcaagaacga cgaatgctcg ttgccctaat tgccataaac
    24961 gaatggaaat gcgcggcgaa ggtgataaac aaatttttgt atgtatttgt ggacaccggg
    25021 agaaactatc tgccttccaa caacgtcgtg acaaacagaa aaataaaaat gtatccaaaa
    25081 cagatgtagc taaattcatg aaaaaacaaa acaagcaaga agatgagccg tttaacaatc
    25141 ctatggcaga agcgcttgcc aaattaaagc tagataaata agaatggaca aagcaaccca
    25201 ctcatattga gtgggtcgct ttgtttgaca tagtctgtcg tatacgaaac aataaaagag
    25261 caatcaatac tgaaaaggag atgtttcacg tgaaacataa tcaattaatt attgaaacgg
    25321 atgtcccagc tgaaatgcgc gatggtgtaa cgctttacgc agatatatat cgtccagcag
    25381 acgcggggga atatccagtt ttacttacaa ggttacctta tagtaaatca tacgggcttc
    25441 actttattcg tcctaatatt ttggcggagc aaggttatgt tgttattgtt caagatgttc
    25501 gtggcagata tacgtcagaa ggagattttg ttccatacat agcagaagtt gacgatggat
    25561 atgatacgat tgagtgggct gcgaacctgc cttatgctaa cggaaatgtc ggcatgtttg
    25621 gtttatctta ttatggttat acgcaaattt tagccgcaat tagcgggaac aaacatttga
    25681 aagccattgc tccaattatg gctcaaaata gcatgacaga tgtttttaat gaccacgacg
    25741 gcgctttaga acttggaatg tgggaaactt ggaatctaga gtccatgctt ccaaacatgc
    25801 tagcccgtac ttataaaacg caagatgaat tagaagaagc agtgaacaca ttaatgaaaa
    25861 atctagacaa tttagacgca ctttatcaat ttaaacctta taaagactgg ccagcaatcg
    25921 gtcaaaatga aatgccttac ttctctgagt tattaaatta tgaaccaaca cataaccatt
    25981 ggcaaaaaat cgatgcaaaa agcaattatg ataaaattaa tgtaccaggt ctccatgtag
    26041 caggctggta tgactgcttt ttagataaaa caatcgctaa ttttcaaaat ggtcacttgc
    26101 gaggtcttgg agataagctc atcattggtc catggacgca tgctaatttc actcagatga
    26161 ttggcgaccg tgattttgga atggcgggca ctaaatgggg agaggcgaat atgcatgcta
    26221 gacatataga atggttcaat cattggctga aaaaagagcc tttaccagca tcagcgcctg
    26281 ttaattattt tgtgatgggg ttaaatgact ggaaaacagc tgaaaactgg cctcctcaaa
    26341 atgcaaatat gacaccatta tattttaaaa atgaaaaagt gagcgcagaa ttcacacctc
    26401 ctacaacatc ttcagaagca aaatttagct atgatccaga aaatccagta ccatcaaacg
    26461 gtggagggac cttacataag gcactaaatg cagatggacc tcgtgaccaa caacaaattg
    26521 aacttcgtga agacgttctt tgctactcaa cggagccact aaaagaagca atcgaagtta
    26581 ccggatcaat tcaagtgaaa ctttgggcca aatcagatgc acctaacacg gattttacag
    26641 cgaaattagt ggatgtattt ccagatggaa cggcttttaa cttagcagat ggcatcatcc
    26701 gggcggccaa gcaacatggc gacaatgtgc aaaataatat taatgaatac actatcgacc
    26761 tttgggcaac aagtaattta ttccaaaaag gtcatcaaat ccgcgttgaa atatcttcta
    26821 gtaattttcc gagatttgat ccaaacccaa atacaggcga taactttatt aattccactg
    26881 aaagccaaat cgccaaccag acgatttatc atagtcctga atttccatca catattcttc
    26941 tgccaatcgt tcgctagaaa ttttggtttt ttgggcgaaa agttttatat acggcactac
    27001 taaatcatgg taaaatatga aagtatccgt caaaaaaatg aaacttattc gaaaagggaa
    27061 tttttatgat aggtttcttt attaaaatat agataaaatg agttaataat ttactcaaat
    27121 gaaggagaag ttgcagtgaa aaacataatt aaaaaaacag ggattgtaat catggcagca
    27181 tcccttgcag taagtggctt cttagtaagc ccgaaagcag cacaagccgc agaagcacca
    27241 aatgtaaatg caaacgcagc aatcgcaatt gaagaaagta ctggtaaaat tttatattca
    27301 aaagacgctg acaagctaat gggcatcgca tccatgacaa aaatgatgga cgaatactta
    27361 ctactggaag caattgacaa aggacaaatt aaatgggacg acaaagtaac catttctgaa
    27421 tatgcttaca aagtttcaca agacacatca ctatcgaacg taccacttag acttggcgaa
    27481 gaatacactg tacaagaatt atatgaagca atggcgattt actctgcaaa cggagcagca
    27541 attgctattt ccgaaaaaat tgcaggttct gaaaaagaat ttgtcgatgc tatgaataaa
    27601 aaagcggacg aacttaatct aggcgagcac caattcgtta acgctacggg ccttaataac
    27661 gaagacttaa aaggcggtca gcaagtaggt ggaccgaaag acgaaaacaa aatgacagct
    27721 cgcggcatgg cgaagttagc aaaacactta ataaatgatt acccagatgt acttaaaacc
    27781 gctagtacaa ctaagaaaga gttccgaaaa ggtacatcag accaaattga tatgacaaac
    27841 tggaactggt tattaccggg cttgatttac gggcgcaaag gtgtagacgg tttgaaaaca
    27901 ggaacaactg attatgctgg aatgtgcttg actgcaaccg ctgtacaaga tggaatgcga
    27961 gttatcacag tcgtactcca tgcaaatggt ggagcgcctg gcgagcatac aagtgctcgt
    28021 tttgatgaaa caaacaaaat gctcgattat gcttttaata atttcaaagt aaaagaagtg
    28081 caaaaagcag gatcaaaagt aaaaaatcct tctacaattg cagtagataa aggaaaagaa
    28141 gatacagtcg gactagttac aaaagatgca gtgaagctag ttgtaccgaa gaatggcaat
    28201 gaacctaagt taaatacaaa ggtaacaatg aaagaaaaaa caatagaagc accagttaaa
    28261 aaaggtacgg aagttggtaa aatggaagta tctctaaaag atggcgacaa gttaggctat
    28321 gttgacggaa aacaaacaga aacaattgac gtactaactg ctagcgacgt tgaaaaagcg
    28381 aactggttca tgctctccgc acaagcggta ggttctttct ttacaggcat tggtaattac
    28441 gtttctgatg gtgtaaaagg gtggtttaat taacagtaga acaattgtag taccgatata
    28501 aataaaagag tcgatttcct gaattaggaa atcgactctt ttattggcta actttagttc
    28561 aatggatttc tttcgcggta tttaacaagt tctaagaagt agctttgtct gcttctatga
    28621 gctatcgtat caaggattaa tccacaaatg aagaacagca tacccattat gattaaacca
    28681 gttgcaagta atgcactcgg aaattttagt accaagccaa tttgagcaaa ctgaattatg
    28741 actggcaaac caactagaac tcctacaagc acaaacaaag aggctaataa attgaaaaat
    28801 aaaaacggac gactattttt aaataatctt acaatcgtca taattacttt gaaaccatca
    28861 gaaaaagtgt ttagttttga ttcactacct tctggacgat cacggtaatc aatttcaatt
    28921 tctttcacta aaaagcgatt ttccaatgcg tgaatgctca tctcagtttc aatctcaaaa
    28981 ccagggctta aaactggcat agtcttaaca aaataacgat caaagccacg gtagcctgtc
    29041 atgatatctc tcaaattact tttgaagata cgattaattg tattacgtac tagtgagtta
    29101 ccaaagtcat gaaaatttct tttattttct tcagtgtagg taccattact cagacgatca
    29161 ccaataacca tattagcttc cttattgcga agcacctcta atatttcatg gcagtattct
    29221 gctggatagg tatcgtcacc atcgaccatt aaatagtaat cagcatctat atccgcgaac
    29281 atagaacgta ctacattacc tttaccttgg cgcatttctt ttcgaacgat agcaccatga
    29341 tctttcgcta tttcaaaggt tttatcttta gaattattgt cgtacacata aatatccgca
    29401 tttggtaatt ctttcttaaa atcatcaatt accttaccaa ttgtaagctc ctcgttataa
    29461 caaggcaaga gtacagctac tttctcattt agaattccca ttattctctc cttaaaattg
    29521 attttctttg taatttttta atttagttgc aaaaaagaca ataggcacgg tgaaaataaa
    29581 actataagaa tatctaaagt ctgttgctgg cattgcgatt gctatagtaa taagtgccat
    29641 tactacaggt gcaaaaataa gaagtttctt tttaggacgt tggaggcaga cggcagcaat
    29701 tgctattatg agcaatacta atggaatggc tccttttaat aaataatttt gccactcatt
    29761 tgttgttttt gcataaatgc tatctgttat tttcttcaga cttggagctt tagatattga
    29821 aataagtgga ttagtagagt catcaatccg tctcttatac tcattgtagc taacagcatc
    29881 ttttccagtt gcatttttgt attcattttg atagacttca tatcctaatt tattaatctc
    29941 ttcttccgat aaaccttctg ggaagaattt ggcgaatgct ctcacatcat atcttgtatc
    30001 ttgaatattc gctgaagtat caaagaatac tttataattt tctggagaat agaattgcca
    30061 aatgactgct gtttgatcta aataagcccc tacataagta ccgaaattag ccgttaagag
    30121 tttgaaccaa tttttaatgt atagtccaaa atcatcttca atgacggatg aattgtattt
    30181 ggtatcatgc ttaattgggt ctacagtata agggttgtaa tcttttttcc aattttcttc
    30241 aggtaatatg gaagtgaaat actcttttaa ttcaggagta aagtttccat cattgtaaaa
    30301 agtagcccca atttgttggg aaggaattgc tagcgcttgg tttaatggat taggttgcgc
    30361 attaagcccg tttgtcataa ccagaccaaa taaaaaattc agtcccaagg ttccaacaag
    30421 aataccggta ataataagac gaaagttttt catgaaaata agcaagcaca gaagcgatac
    30481 gatgataatc atcattccat tgtttcgtaa atttatacaa acaaaagcta ctaaaacaaa
    30541 agcgataagg tgccaccaat ttttcagcca cattccatta gattgtacta tttttaaaat
    30601 taaaacggtg aaaagtaata taaaggctgc aaatggaaaa tctttccatg ctgttgcaga
    30661 ataaaacatt gctgcagggt aaatggcata gccgattgaa atacaaacac caatccaaat
    30721 atgcgcgccc atttttacaa gagtataaat agcaaagcca acgattaatg aaacaacaat
    30781 tatttgagaa aaaatgtaac tcgaaggtga gtcgtaaatc gcacttgttg tttctatcca
    30841 caaagtgtgt aaaagcggat gccactgact atattggcga ataccgtgag ccattcccca
    30901 ttggtaatag gagtcaaatg tcatttttgc tggataatag gctagaaatg aaatcatcca
    30961 gaccacgaat ggaatactcg taaatagtgc gaaaaatggc cattttactt tgcgattcgg
    31021 tcttgcttta tattccgttc gcatttcaag taataaaagt aaaacaaaga tagtgattac
    31081 aagaaaagtt cctgctaaaa taatactatt aaaaacaaaa ttcccgccat atggtccacc
    31141 attgaatgat gaagccatcc aaaataaact aattattagt gaggttatca atgttgacca
    31201 ttgaaattga aagtttttct cttgtctaaa ataa
//
LOCUS       DASDYK010000022        30070 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.022, whole genome shotgun sequence.
ACCESSION   DASDYK010000022 DASDYK010000000
VERSION     DASDYK010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 30070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30070
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.022"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(94..864)
                     /locus_tag="U0308_001019"
     CDS             complement(94..864)
                     /locus_tag="U0308_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM2315991.1"
                     /translation="MLSTAKERQLKIVNRLKVEQFMRIIDLVELVNYSEATVKRDLVE
                     LEKEGLVRRTRGGAMIIDNKKIDLPYLMKMNERSNETSKIRIADIAKSLIRDDMVIFL
                     DSSSTSLHLIDVLSKFDGLQIITNGVMTASMLSEFTNARVSILGGSILTKRYTVNGAK
                     AYNDALTYNADIAFVSCRGIDYDKGATETHEGEALIKQAFRRQSSSLVLLVTEEKVGH
                     KFMHQSLACHDIDYLITDFKLDPDVEEQFKTHQITCLY"
     gene            complement(921..1781)
                     /locus_tag="U0308_001020"
     CDS             complement(921..1781)
                     /locus_tag="U0308_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketose-bisphosphate aldolase"
                     /protein_id="HEM2315992.1"
                     /translation="MLYTMKDLLAVGKEHQFAVPAFNICSFDMLKAIMEEVEANNAPV
                     ILEIHPDEIEYLGDNFVATVREYAHKSKVPVVIHMDHGGTIKDVMRAIRNGYTSVMID
                     ASRASYEENVALTKQVVELAHKVGVSVEAELGTIGNNGSAEGGADTIIYTDPDQAEDF
                     VQRTGIDTLAVAIGTAHGLYPKDKKPELNMPLLKELNKRLDIPFVLHGGSGNPDKEVS
                     ESVQYGVRKVNLSSDLKSVFFEEVRRVLVDNPAMYEPNQVYPSANEKVKEVVRHKLHI
                     LNTTGQRDKY"
     gene            complement(1781..3175)
                     /locus_tag="U0308_001021"
     CDS             complement(1781..3175)
                     /locus_tag="U0308_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HEM2315993.1"
                     /translation="MKIVGVTACPTGIAHTYMSAEKLTITAEALGYEVKIETQGAKVE
                     NVLTKEDIATADYVILAVDKEIDTSRFAGKKIKKVSTSRAIKEADVVIEETISGKGLI
                     SLEAKSSDISSEQPSKASLYNHFMNGVNYMLPFVIAGGILIAISFAFGIDASNPDSDS
                     YNALAAAFSKIGGDTAFGLMVPALAAGIAVSVAGRAGFAPGLVAGTLATVGGSGFLGG
                     MIGGILAGYVAHFFANKVNVTKSLASIYQLIVVPLLGITIVGLAMVFIIDTPIAWVLN
                     ALTGWLNGLGETSGVVFGLLIGVMMAADMGGPINKSISTFSIGLMSAGVTAPIAACMA
                     AGMVPPLGLALATLLFKNKFTKEEKTAGNSCWVLGASYITEGAIPFAVADPLRVIPSL
                     MLGSATAAAISMGAGVTSMAPHGGIWVMFIPNVINHLFIYLLAIAAGTVVTAISVGLL
                     KTPLNKRKNKEEMI"
     gene            complement(3189..3635)
                     /locus_tag="U0308_001022"
     CDS             complement(3189..3635)
                     /locus_tag="U0308_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2315994.1"
                     /translation="MNISNLINEDRIIFDNRIQTKQLLFEKVAEVLGEEGSITNPKKF
                     IRDLYKREEETSTGIEDGFGIPHAKSKYVKEPLIVFVHSGIINDYFGLDDSPIECSFL
                     IGVPKKATDVHLQILSELSRKLMNKEFREKLKNSKNKTEIITILSN"
     gene            complement(3836..4852)
                     /locus_tag="U0308_001023"
     CDS             complement(3836..4852)
                     /locus_tag="U0308_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEM2315995.1"
                     /translation="MLKMGFIGNGKSTNRYHLPFILERDNIEVKTIYNRNPKTATWDK
                     IEGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEA
                     KEIFELAKERDLLVQCYQNRRFDSDFLTAQKVIESAKLGDLLEVEMHYDYFRPEIPES
                     VHEFKFYDSYLYGHGCHTIDQVLSYFGKPDNIHYDVRQLLGEGRMNDYFDLDLYYGVT
                     KVSVKSSYFRIKARPSFVLYGKKGMFTKETKDRQEEHLKLFYMPSNPDFGIDLPEHYG
                     TLTYVDDAGVWHEEKVISEVGDYGRVYDGLYDAIINGKPKQVTDEETLLQMEILEKGV
                     EACK"
     gene            complement(5056..6576)
                     /locus_tag="U0308_001024"
     CDS             complement(5056..6576)
                     /locus_tag="U0308_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavocytochrome c"
                     /protein_id="HEM2315996.1"
                     /translation="MKKRLATTFIMLLSLALIIAGCGSNNTSKSDTEKTKEKEKTEVT
                     SGASKTSYTDPSELKDKYDIVIVGAGGAGMSAALEAKAKGMNPVILEKMPLAGGNTMK
                     ASSGMNASETKFQKEEGINDSNDKFYEETLKGGHGTNDKAMLRFFVDNSASAIDWLDS
                     MDIKLNNLTITGGMSEKRTHRPEDGSAVGKYLVDGLLKNVQEQKIPVFVNADVKEITQ
                     KDGKVTGVKVKLNNKDEKTISSDAVVVTTGGYGANKDMIEKERPDLKGYVTTNQEGST
                     GDGIKMIEKLGGTTVDMDQIQVHPTVQQDKSYLIGEAVRGEGAILVSQEGKRFGNELD
                     TRDNVTASINKLPEKSAYLVFDSGVKDRVKAIAQYEEMGFVEEGKTIDELAGKINVPK
                     EELTKTLDTWNASVKNKKDEAFGRTTAMDNDLSKAPYYAIKIGPGIHYTMGGVKINTN
                     TEVLDKDGKPITGLFAAGEVTGGLHGENRIGGNSVAEIIIFGRQAGDKSAEFVKAQ"
     gene            6813..8339
                     /locus_tag="U0308_001025"
     CDS             6813..8339
                     /locus_tag="U0308_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEM2315997.1"
                     /translation="MTIKKYEPLNLYTNFKKSAERYPEMPIHFDEELVTFPELGLHTT
                     YKKCEEAIIQKAAHLHKFGVRKEEKVIVYKSAKFDSYILAVAISYIGAVPIMVSPHLP
                     ASTIDIFVNRLDQPWLLFDSETSEKSHQLNNLPDSRLINAEQLFKAPLDGYTCEQEEL
                     PKDMIAYMTHTSGTTGVPKLIAHSANSMGWRTKYQRRILNFIKPRGLVAFHISPVHSR
                     FNIGVSSLMSLGFPLLPIANPTKANVEKVLREYKPYVLETHPNHFVQWASLAREKPDV
                     FQSIKFYHSTFDAINKETMAVFLRTSEYKKPIFLQIYGQSECGPMILRGHTLQSIETL
                     NARDMGIGVPGLTEVRIVDQDGNPVPAGVSGNIQMLSKGRALTYYKEEARFEENVYGP
                     WWDSGDYGMKDEQGRLFLQDRQVDLVETIDSTLAIEDKLLDTLTFLDEVVIIRGENGS
                     PQPIIAVHNDGEMNWDAWWKAVSDLPHMNEPMVMKYDEIPRTATMKVQRLQMERELKK
                     "
     gene            complement(8380..10149)
                     /locus_tag="U0308_001026"
     CDS             complement(8380..10149)
                     /locus_tag="U0308_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="InlB B-repeat-containing protein"
                     /protein_id="HEM2315998.1"
                     /translation="MKSKGRLFLYVVLALSIVIGTNVFIKIDAHAAAAPPAAISQIFP
                     DDALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTLILTG
                     NQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTN
                     LKGLGLYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQINNL
                     QGLSNLNNLFLLDLSANQIVDTTPLAGLTKVQTLYVSNNQISDVTGISSLINLDWLDI
                     SQNKISNIRPLNSLTKLTIIQMTNQLIVNEPISFESTVTIPNLIKNIAEQTIDPDTIS
                     DNGVYANEAVTWNLPTYIPKVSYTFIERDTIGNATGNFSGTVEQPLVQYFKATFNIDG
                     QETTENVETGTLLQEPPTPVKEGYTFNGWYDAETGGTKWDFTADTMPANDITLYAQFS
                     INSYTATFDVDGVISTQAVEYQGLLEEPPAPTKDGYTFKGWYDAKTGGTKWDFTNNQM
                     PANDITLYAQFSKDASSGGDGGGTDEGGGNSENSTEGAPNTSDIDTINHIVLPATGDD
                     HVLFPIFIGTFLTSLALLTLRRK"
     gene            complement(10247..10657)
                     /locus_tag="U0308_001027"
     CDS             complement(10247..10657)
                     /locus_tag="U0308_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003729091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2315999.1"
                     /translation="MDYIITTDLPNAEEFVKLRVDAGLSFRSIEVSRQALLKSVYFVG
                     LRSKEDNALIGMGRLVGDGIMFIVSDIAVLPEFQGNGYGKLIMTHIKNYIDSNLDKTA
                     CVTLLADVPADGLYKQFGFRESAPASIGMIYQMK"
     gene            complement(10723..11487)
                     /locus_tag="U0308_001028"
     CDS             complement(10723..11487)
                     /locus_tag="U0308_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM2316000.1"
                     /translation="MFPFERQNKIIHLLDQNSKITVPELSRILDVSISTIRNDLSSLE
                     ESGMIKKVHGGAVLLKSEEKFTNFNDRIIRNIEEKEAIAKEAATLVKNNQTIILDASS
                     TALALAKELHGFSRLTVITSGLYTAIELKDNPNISVILTGGIVTTNSFTLEGILGANL
                     IENIHADLCFMSAKGFTMEEGLTDFNIYETELKRLLAKRTNKLIALLDHTKMGVISTA
                     SITAAENIDLLITDNKINKALYKKFQDAGLPVKIAE"
     gene            11670..12047
                     /gene="dhaM"
                     /locus_tag="U0308_001029"
     CDS             11670..12047
                     /gene="dhaM"
                     /locus_tag="U0308_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HEM2316001.1"
                     /translation="MISIVLVSHSQKITEGLQEMIVEMVGDTVHIISSGGTGDGRLGT
                     NAIMIADNIATCTNSEHIYIFCDIGSAILSAETALELLETDLLEKTTIIDAPLVEGAF
                     TAAVQSLVNPSKEAILQELTNVH"
     gene            12132..12563
                     /locus_tag="U0308_001030"
     CDS             12132..12563
                     /locus_tag="U0308_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316002.1"
                     /translation="MKFFRGMIGFCIAGMIVMSVWTPLAENYGIFGGYLAAFIIIGPM
                     WFMNHYVGLIENDEDAAFVDMAVGIGICGIMRDVFMQGGGELVSSLPTIGLVAIGAVL
                     AGIVAAAIEKDMAKKQEAKQEKTEPGMNMKEEERLNENQLV"
     gene            12579..12920
                     /locus_tag="U0308_001031"
     CDS             12579..12920
                     /locus_tag="U0308_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316003.1"
                     /translation="MSIGIALATIAGGFLFPFAIRMMWGKMVDEWGAIGGWMAAAFIV
                     GTVWTINHGIPKSMIYQSGTVWVDMAVAAGIGVFTASLLTGGKFSKSIVNLAAAVVGG
                     VLGGFLLSLFL"
     gene            12942..13937
                     /locus_tag="U0308_001032"
     CDS             12942..13937
                     /locus_tag="U0308_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HEM2316004.1"
                     /translation="MRRLVNDGYEAVEEMLAGYVAAQGKYVDFAENDKRVIVSKQMSE
                     EPRVRIIVGGGSGHEPLFLGYVGKDFADAAVVGNINTSPSPEPCYNAVKAVDSGKGCL
                     YMYGNYAGDVMNFDMGAEMAADDGIRVETVLVTDDIYSAENVEDRRGVAGDLIVFKAA
                     ASAAAKGLDLDAVKQAAEKANANTFSMGVALSSSTLPVTGKAIFEMKEGEMEVGMGIH
                     GEPGIKRTSIEPADKVVDQIMGYLIEEMKLTADEEVHVLINGLGGLPVMDQYICYRRV
                     DEILKEKGVHIHNPLVGNYATSMDMIGMSITLVRLDDELKDLLDTPCDTPYFKVD"
     gene            13959..14609
                     /gene="dhaL"
                     /locus_tag="U0308_001033"
     CDS             13959..14609
                     /gene="dhaL"
                     /locus_tag="U0308_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit L"
                     /protein_id="HEM2316005.1"
                     /translation="MSELVMDSAFFGHVLQDMGALIEKERDYLTGLDSDIGDGDHGIN
                     LSIGFREVNKQLDELLTASPDIATLLKKSGMILLGKVGGASGPLYGSFFMKCGADVPG
                     KTEVNFDELCGMIINGAAAVQHRGKAELGDKTMMDAFLPGVEVLQNRDTNAAPIETFS
                     AFVDAMHAGAQSTIPLIAKKGRALRLGERAIGHLDPGSESSWMLMNVILENLKKAV"
     gene            14613..15377
                     /locus_tag="U0308_001034"
     CDS             14613..15377
                     /locus_tag="U0308_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEM2316006.1"
                     /translation="MRKPLVGINMKNYINTRAQTSEWLEATIPLLKNFSDVDTFIFPS
                     MGTLETTANLLAGTSFGFGPQNMAPEKSGPLTGEFSVESIIDLNANYVEIGHAERKNL
                     FHEKTSEIAKKIKLALDEKITPVVCVGEEVRANDTNELKNALKKQIEALFQTINLAQW
                     ENVVLAYEPEWAIGKASSAETNYIESAHQALREIIRELGGDETLVRIIYGGSVSKENA
                     AEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG"
     gene            15384..15830
                     /gene="rpiB"
                     /locus_tag="U0308_001035"
     CDS             15384..15830
                     /gene="rpiB"
                     /locus_tag="U0308_001035"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEM2316007.1"
                     /translation="MKIAIGCDEMGYELKQTLITRLKEKNIEFTDFGSFENEKVLYPS
                     IAEKVALEVKNNDYDRGILICGTGIGMAITANKIHGIRAAQIHDSYSAERARKSNDAH
                     IMTMGALVIGPSLAVSLLDTWLDSDFSGGRSQAKVDLMEEIDQKNR"
     gene            15855..16619
                     /locus_tag="U0308_001036"
     CDS             15855..16619
                     /locus_tag="U0308_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-threitol dehydrogenase"
                     /protein_id="HEM2316008.1"
                     /translation="MTFKGFDKDFNITDKVAVVTGAASGIGKAMAELFSEKGAYVVLL
                     DIKEDVKDVAAKINPSRTLALQVDITKKENIEKVVAEIKKVYPKIDILANSAGVALLE
                     KAEDLPEEYWDKTMELNLKGSFLMAQIIGREMIATGGGKIVNMASQASVIALDKHVAY
                     CASKAAIVSMTQVLAMEWAPYNINVNAISPTVILTELGKKAWAGQVGEDMKKLIPAGR
                     FGYPEEVAACALFLVSDAASLITGENLIIDGGYTIK"
     gene            16666..17322
                     /gene="fsa"
                     /locus_tag="U0308_001037"
     CDS             16666..17322
                     /gene="fsa"
                     /locus_tag="U0308_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HEM2316009.1"
                     /translation="MKFFLDTASVSEIKRISELGLVDGVTTNPTIIAKEGRPFEEVIK
                     EICSIVDGPVSAEVIGLEADKMVEEARILAKWAPNVVVKIPMTEEGLKAVHTLTAEGI
                     KTNVTLIFTVSQGLMAAKAGATYISPFLGRLDDIGTDGMILIKNLKKVLDNYGLKAEI
                     ISASIRHIGHLEEAAEAGAHIATIPGSLFPKLWSHPLTDKGIEGFLKDWEAFSQKEGN
                     "
     gene            17324..19321
                     /gene="tkt"
                     /locus_tag="U0308_001038"
     CDS             17324..19321
                     /gene="tkt"
                     /locus_tag="U0308_001038"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEM2316010.1"
                     /translation="MSRIDEQMVNSIRVLSMDMIEKANSGHPGLPMGAAPMAFSLWKN
                     HLKFNPEHPTWFNRDRFVLSAGHGSAMLYSLLHLFGYDLPMSELKNFRQTGSKTPGHP
                     EFGHTVGVDATTGPLGQGFAMGVGMAMAEAHLGAKFNQPEFPVVDHNTYVLCGDGCLM
                     EGISYEAASLAGHLKLGKLVVLYDSNDISLDGDLNESFSEDIELRFRAAGWQTLRVDD
                     GNDLDALDAAIHLAKTEKSRPTLIEVKTVIGYGSPGKAGKSAAHGSPLGEKELKLAKE
                     AYDWQMPPFELPKTVENQKEFYHSKGRASESSWLRTFNAYKQKYPALAESLQQLMDDN
                     LDADWDAELPVFDENADKAVATREVSGIVLQELEKKLPNLFGGAADLASSNKTHLKAS
                     ERFAPGNYAAKNISFGVREFAMGAAVNGMTLHGGVQAFGATFFVFSDYLRSAIRSAAL
                     MGIPSTFIMTHDSIAVGEDGPTHEPIEHLASFRAMPGLHVIRPADGNETVEAYRYAFT
                     QKEQPTMLVLSRQNLPILPNSAAKAQTGLAKGAYILADSPLDKLDIILLASGSEVHLM
                     TAVRDNLAKKGFGARVVSMPSFDLFDKQSPEYKESVLPKAVKNRFAAEMGASYGWHKY
                     LGDTGQILAIDSFGMSGPGDELARRFGFTVENLTELALKQL"
     gene            complement(19441..19629)
                     /locus_tag="U0308_001039"
     CDS             complement(19441..19629)
                     /locus_tag="U0308_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014931136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316011.1"
                     /translation="MEERFEKIYTQGKLNIMEIWVDKETGVQYVYHLSGYAGGMSPLL
                     DADGKPLLADLSKLNGAE"
     gene            complement(19673..19741)
                     /locus_tag="U0308_001040"
                     /pseudo
     CDS             complement(19673..19741)
                     /locus_tag="U0308_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463869.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic pyrophosphatase"
     gene            complement(19889..20265)
                     /locus_tag="U0308_001041"
                     /pseudo
     CDS             complement(19889..20265)
                     /locus_tag="U0308_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009924275.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(20434..20661)
                     /locus_tag="U0308_001042"
     CDS             complement(20434..20661)
                     /locus_tag="U0308_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316012.1"
                     /translation="MEYEQMADSLAYGEEYNFYYKNEEYWLSKNREGHYLTKVSDGET
                     QEFRTSEDLLGTARINGKLIIEIWENIQSQF"
     gene            complement(20740..20970)
                     /locus_tag="U0308_001043"
     CDS             complement(20740..20970)
                     /locus_tag="U0308_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012951181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM2316013.1"
                     /translation="MKQCPVCENYTIEANYDICEVCYWEYDVVAQEYPDEIIGANNIS
                     LKQAKINYAKFCAVEEKYITLVRKPRQDELPE"
     gene            complement(21331..21726)
                     /locus_tag="U0308_001044"
     CDS             complement(21331..21726)
                     /locus_tag="U0308_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012951179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316014.1"
                     /translation="MRYEAKIISENPNIEEELKIKIKDIELLCFVEEYKCSVEVGQEY
                     IVELETVVFDDLDIEKSTLQAKEITQVADSFAYFIRGVFHPSSKKIDSGIEIDLADED
                     ISDFWYLENQFVALNVDRFNIDVIEKVNK"
     gene            complement(21738..23174)
                     /locus_tag="U0308_001045"
     CDS             complement(21738..23174)
                     /locus_tag="U0308_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009928199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LXG domain-containing protein"
                     /protein_id="HEM2316015.1"
                     /translation="MSRIDIAELNDFLHGLRSSNAEAKAMIRKIKEAAMDYAQDNRLK
                     GEAVSTSKRYFSSTYTSICQSIIEALDESEERLAQYIREFGSQVDSSPSARIDAEILQ
                     EAMAKVSQLQRKEEDLHRQLTAPNTKPDMQQVYAVKSRSVHTQLLKAIEKENILERYL
                     AFEQSHGQFFSALDELIRATGRAVQELLHHVTFNDKTGTYSVPKSAVNSLLLMKKALD
                     NARTENDQDPFPKAFEDYTVLAYTYVNDQGETVTMWLLEKDGKRVENKELQDFLEKHG
                     QELDPLLYTNLSGEELERKVNDSWKEGINYLNGQKVSGFSGATLRSSAYVASMKDWTD
                     DAGLTDMALGLGFGIAAARNKAIIPKKSSGLKFDDIEKLENHFTKHGGEFKGAYSNIN
                     EYLKGANNVIKNGEKVQYNYTLKDGTTELRTGYVKFMGNTSKGKAKFEFVGTNLSGDI
                     TTYHVKRGEDVYKLLNGNKHINVINPIE"
     gene            complement(23171..23539)
                     /locus_tag="U0308_001046"
     CDS             complement(23171..23539)
                     /locus_tag="U0308_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P"
                     /protein_id="HEM2316016.1"
                     /translation="MDSAHRQLEQQLQQIKKAKIMAETDVDQTRRKQNEQDWLEEDSH
                     QLTQEKLVLLDFLRSGWQGEEASGFHRFLEEQQHEESQAWRRDLQDKRSDLDTELQEN
                     KARLHTLETKQATLQKEWSK"
     gene            complement(23540..23824)
                     /locus_tag="U0308_001047"
     CDS             complement(23540..23824)
                     /locus_tag="U0308_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3130 domain-containing protein"
                     /protein_id="HEM2316017.1"
                     /translation="MREIKVSEVTFQQHATKLASKSSGRYLPLKNGNMAYSRANSIDQ
                     LRSALIDLVGVVEDFQHVTKQDAGRLKKMGIAYAKQDQVMGQKINQLEVR"
     gene            complement(24037..24561)
                     /locus_tag="U0308_001048"
     CDS             complement(24037..24561)
                     /locus_tag="U0308_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase I"
                     /protein_id="HEM2316018.1"
                     /translation="MNKMIIYSSQYGTSKKYATELSQKKAIPMYSVESIPESIVEADE
                     IIYVGAIYMGKVLGFDKFSKNYKTLSSKLIVISAGMYDPTRKENTDNIELTVKENLQK
                     TNFLLKDIFCLKGRLDTQQLRLKHKMLVNALYKSAKRKKESDLNDNERDIVRAYEDDS
                     QIDLNKLDGILDRV"
     gene            complement(24785..>30070)
                     /locus_tag="U0308_001049"
     CDS             complement(24785..>30070)
                     /locus_tag="U0308_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapB repeat-containing protein"
                     /protein_id="HEM2316019.1"
                     /translation="LGYLAPFDTLLVGADETTVTEDTTVKTAETETATEATESESGSD
                     NEKAEEPKEAEASKETTEKEEKAKTKEPASNIKTEINTDKSQLKQTNLKAVVPAGSTY
                     NSLFPDDNLAKKLAVIITGNAAATGNESVDSAALLAISQLDLSGETGNDPTDISNIEG
                     LQYLENLTSLNLSENNISDLAPIKDLVNLVSLNLSSNRTLVNLSGVEGLVNLQELNVS
                     ANKALEDISQVAALPVLKEISAQGCNIKTLELDNPAGAILPELETFYLQENDLTDLTS
                     LAKLPKLKNLYIKGNASLKSLATLKGATKLQLIDASNCTDLETLGDISGLSELEMIQL
                     SGCSKLKEITSLKDLPNLVNITADSCAIEDLGTLNNLPKLQTLILSDNKDLTNINAIT
                     DMPQLKTLALDGCGITSIGTLDNLPKLEKLDLKENQLTSISEINDLPRLSYLDVSVNY
                     LTTIGELKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNVIRTVGKMTELPSLK
                     EFYAQNNNVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITNTSV
                     IHDLPSLETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKLEILKVTD
                     NYSYLRSLGTMDGVSKLRNLELQNNYLNYTGTEGNLSALSDLTNLTELNLRDNGYISD
                     ISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIEDISALSDLDNLNKLA
                     LSKNKIIDISPAANMVNRGASVTASNQTYTLPTVLSYQSSFTIDNPVVWYDGTPLAPS
                     SIAHSGTYKDGEITWTNMTAASSSTEFNFNRLKDGLTFSGTITQPYKSAVKVTANAEQ
                     TYTIGDTISEEQFLKDVNAKSSDGAPVTSDFATVVDLNTFGEYEVTLTSEKDGIQGDS
                     CKVIVKVLHGAPVISADQTINYDKHATITEKQFLEDVHASTDLNTAITTNFSTAVNLN
                     KGGDYTVALNSENEDGVKAETVYVTVTVDKDPAPIISAKTDITYDKFSKKTEAAFLDD
                     IDADTNDGSIITSNFATAVNLDKAGDYTVTLNSINSDGVASTPTAIIVHVEKEKIATI
                     SANTAQQYEKYAEINETQFLKDVHASINASPTTAVLESDFETVVKLDVPGTYTVTITA
                     TNEDGGVSAPKEVSVIVKKLPAPEITADKEITYPKFDEVSEAEFLSDIHATINEKNVT
                     ITSNFSADVNLNKAGDYTVTLNATNEDGVKATPVEVIVHVQQGERPVITADATISYDK
                     FANITEAKFLEDIHATSSDGQSSTVITSNFETATNFKTAMSYTVTLNAVNEDGISAEP
                     VAVTVTINKEPAATLKADAEVSYAKNEAVTESDFFKDVHLEGAEAPSTAKATSNFDSV
                     VDRSKTGDYTVTINATNEDGAVSTPIEVIVHIGAESAPVITANAEVKYNKHEQTDERR
                     FLYDSDAKIDEANVEIKTDFAEKVDINKVGTYTVTLTATNEDGQAANPVEVSVIVSDA
                     AAEKVNVKYVDENGAEISAAETLTGNLDDAFSIDAKSIAGYKCDATLSGVFSTVEQTV
                     VFHYKAIEPGVVTIKYEDANGKAVAEDKQITGEVGDDFEAEAQTVSGYSCRAIASGKI
                     TEEPQTITFTYTTATPSKKSGEITVQYVDESGKKLADSKKVTGDIDDSYSVEAKAIDG
                     YSVVGDDSAKGVFTEKSQTVTFKYKKNTQVSKDEPKVKGKTNQPPSADTKLKVDNNTL
                     PATGDTENMALAVLIGFNMLLVASIFLFRKPKTNQ"
BASE COUNT         8615 a         6099 c         5360 g         9996 t
ORIGIN      
        1 aatttaatga cattcacttt ttcggaagtt tattggtaat acctgtttta tttttagtac
       61 ttacgattat ttttgcctat ttaagtataa aatctaatac aaacaagtaa tttgatgggt
      121 tttgaactgt tcctctacat ctgggtccag tttgaagtcc gtaattaaat agtcaatatc
      181 atgacatgct aagctttggt gcataaactt gtgtcctact ttttcttcgg tgacaagtaa
      241 aacgagcgaa cttgactggc gcctgaaagc ttgtttgatg agtgcttcac cttcatgtgt
      301 ttccgttgca cctttgtcat agtcgatccc ccggcatgaa acaaaagcaa tatccgcatt
      361 ataagttaaa gcgtcattgt atgcttttgc gccgttcacc gtatatcgct tcgttaaaat
      421 cgatcctcct aaaatactaa ctcttgcatt tgtaaattct gatagcatgg aagccgtcat
      481 gaccccgttt gtaataattt gcagtccatc aaatttactt aaaacgtcga ttaaatgcag
      541 tgatgttgag ctagagtcta agaaaatcac catatcatcg cgaatcagtg atttggcaat
      601 atcggcaatt cttattttac tcgtttcatt acttcgctca ttcattttca ttaaataagg
      661 caaatcgatt tttttattat cgataatcat tgcgccgcct cttgttcgtc tcacaagtcc
      721 ttctttttct aattctacta aatcccgttt aacagtggct tcgctgtagt tgacaagctc
      781 cactaaatca ataatccgca taaattgttc cacttttagc cggttaacga tttttagttg
      841 ccgttccttc gctgtgctta acatgttcct ccactcctta aagggcaaaa gcactataac
      901 tagcgcttct acccttctta ttagtattta tctctttgac cagtagtatt taaaatgtgt
      961 aatttatgtc ttacaacttc ttttactttt tcatttgctg atgggtacac ttgatttggt
     1021 tcatacatcg caggattgtc cactaaaacg cggcgaactt cttcaaaaaa cacacttttc
     1081 agatctgaac taaggtttac tttcctaaca ccgtactgta cagattcact gacttcttta
     1141 tctggatttc ccgaaccacc atgaagtaca aacggaatat ccaagcgttt atttaattct
     1201 tttaaaagag gcatattcag ttctggtttt ttatctttag ggtataaacc atgcgccgtt
     1261 ccaatagcta cggctagcgt atcaatgcca gttctctgta cgaaatcttc tgcttggtca
     1321 gggtcagtat atatgatggt atccgccccg ccttctgctg aaccattgtt cccgattgtt
     1381 ccaagttccg cttcaacaga aacaccgact ttatgcgcaa gttcaaccac ttgcttagtc
     1441 aacgccacgt tctcttcgta actggctctt gaagcatcaa tcatgacaga agtatagcca
     1501 tttctaattg cccgcatcac atctttgatt gttccaccgt ggtccatatg aataacgacc
     1561 ggcaccttac ttttatgtgc gtattctctg actgttgcaa caaagttatc accgagatac
     1621 tctatttcat ccggatgaat ttctaaaatt acaggagcat tatttgcctc cacttcctcc
     1681 attatcgcct ttaacatatc aaaactacag atattaaatg ctggtaccgc aaattgatgc
     1741 tcttttccta ctgctaaaag atctttcatt gtatataaca ttatatcatc tcctctttat
     1801 tttttcgctt gtttaatggg gtttttaata gtccgacaga aattgctgtc acgactgtgc
     1861 ctgctgcaat tgctagtaag tagataaata aatggttaat tacatttgga atgaacatca
     1921 cccaaattcc accgtgaggc gccatcgaag ttacaccagc tcccatcgaa attgcagcag
     1981 ctgttgcaga acctaacatc aaacttggga taacccggag cggatcagca actgcgaaag
     2041 gaattgctcc ttcagtaata taagatgcac ctaacaccca acaagaattt cccgctgttt
     2101 tttcttcttt tgtaaatttg tttttaaata atagtgttgc gagtgctaat ccaagtggcg
     2161 gaaccattcc agccgccata caagccgcaa tcggcgccgt tacacctgct gacattaacc
     2221 caattgaaaa ggttgaaata gatttattaa ttggcccacc catatctgct gccatcatca
     2281 caccaatgag tagtccaaat acgacgccag atgtctcacc aagcccattc aaccaacctg
     2341 tgagtgcatt taaaacccaa gcgattggtg tatcaataat aaataccatc gccaaaccaa
     2401 caatcgtaat ccctaaaagc ggtacaacaa tcaattgata aatcgaagca agtgatttag
     2461 tgacattgac tttattagca aagaaatgtg ccacgtaacc agccaaaata ccaccaatca
     2521 taccgcctag aaatcctgat ccaccaacag tcgccagtgt ccctgccaca agcccgggcg
     2581 caaatcctgc tcgaccagcc acagaaaccg ctatccctgc tgcaagggct ggaaccatta
     2641 aaccaaatgc agtatcccca ccaatttttg aaaatgcagc tgcaagtgcg ttatacgaat
     2701 cagagtcagg gtttgaggca tcaattccaa aagcaaaact aatagcaatt aaaatcccgc
     2761 cagctatgac aaatggcaac atatagttaa caccattcat aaagtgattg tataaacttg
     2821 cttttgacgg ttgttccgaa cttatatccg aacttttcgc ctccaaactg attaaccctt
     2881 taccagaaat agtttcctca ataaccacat cagcctcttt aatcgctctg gaagtggata
     2941 cttttttaat tttctttcca gcgaaccttg atgtatctat ttctttatcg actgctaaaa
     3001 tgacataatc agcagtcgcg atgtcttcct tcgttaaaac attttcaacc ttagctcctt
     3061 gtgtctcgat tttcacttcg taaccaagcg cttctgccgt tatagttaat ttctcggcag
     3121 acatatacgt atgcgcaata ccagtgggac aagcagtaac accaactatt ttcatgtgaa
     3181 acgcctcctt agttcgataa aattgttata atttccgttt tgtttttgga attttttaat
     3241 ttttcacgaa attctttgtt cattaacttc ctcgatagtt cacttaggat ttgcaagtga
     3301 acatctgtgg cttttttcgg aacaccaata agaaaactac attcaatcgg tgaatcatct
     3361 aatccaaaat aatcatttat aatgccagaa tgaacaaaaa caatcaatgg ttcttttaca
     3421 tatttacttt ttgcatgagg gatgccaaaa ccatcttcaa ttccagtaga agtttcttct
     3481 tctcgtttat ataagtcacg tataaatttt tttggatttg ttatagaacc ttcttcacct
     3541 agtacttctg ctactttttc aaataataat tgttttgttt gaatacgatt atcaaaaata
     3601 attcggtctt cattaattaa attcgatata ttcataatcc acatcctctc tcaacaaagt
     3661 aagcgcttca cttgtttgat tacactatat cacgctgaac gacttcattc aatattatgg
     3721 gtgtattatg caaaaagttc atttttagag ctattttggt tgtttatatg aacgaaatca
     3781 atcattttta tccaaaaaaa ttgtccgcaa gcttgctccc gcggacaatt tttcattatt
     3841 tacaagcttc gacgcctttt tctaaaatct ccatttgtag caaggtttct tcgtcagtta
     3901 cttgttttgg tttcccgtta ataattgcat catacaaacc atcataaacg cggccgtagt
     3961 cgccaacctc agagattact ttctcctcat gccaaactcc ggcatcatca acatacgtaa
     4021 gcgttccgta atgctctggt aaatcgattc caaagtctgg attacttggc atgtaaaata
     4081 gttttaaatg ttcttcttgg cggtcttttg tttcttttgt aaacatacct tttttgccgt
     4141 aaaggacaaa gcttggacgg gcttttatac ggaaatagct tgattttacg gatacttttg
     4201 ttacgccata atataaatca aggtcgaaat aatcgttcat tcgtccttcg ccgagcagtt
     4261 ggcgcacgtc ataatggatg ttgtccggtt tgccgaagta agaaagtact tggtcgattg
     4321 tatggcagcc gtgaccgtat aaataactgt cgtagaattt aaattcatga accgactctg
     4381 ggatttctgg acggaaatag tcataatgca tttctacttc caataaatcg cctaattttg
     4441 cactttcaat tactttttgt gctgtaagga aatcggaatc gaaacgacga ttttggtagc
     4501 attgaacgag taaatcacgt tctttagcta gttcgaaaat ttctttcgct tcagcgtatg
     4561 tcatcataaa tggtttttca acaagcacat ttttgccgtt ttctaacacc attttggcat
     4621 agtcgaagtg agagctttgt gttgtagaga tggtaattaa ctggatttct gggtctttta
     4681 acagctcgtc taagtcggtt gtatagtgaa ccccttcaat tttgtcccat gtggctgttt
     4741 tgggatttcg attataaatc gtcttcactt caatattatc ccgctctaaa ataaatggta
     4801 aatgatatct attcgtactt tttccgtttc cgataaaacc cattttcaac atactatttc
     4861 ctccttattt taacaaacta acaaatttag cttaaacgct gctaatttat cagtgtatat
     4921 atctcacttg ttacccatcc atagtactac actaacgcgc tatttagcca ataaaaaact
     4981 tgctaaaacg tctgtttaag gcgtcctaac aagtttttat tttctattaa tcacatcact
     5041 atggtgtatg ggttcttatt gtgcttttac aaattctgct gatttgtcgc cagcttgacg
     5101 tccgaaaata atgatttcag cgacagagtt tccgccaata cggttttccc cgtgcaagcc
     5161 accagttact tctcccgcag caaataggcc tgtgattggt ttaccgtctt tgtctaaaac
     5221 ttctgtattt gtattgattt ttacgccacc cattgtgtaa tgaattcctg gtccgatttt
     5281 gattgcgtaa tatggtgctt tagataaatc attatccatt gcggttgttc tgccgaatgc
     5341 ttcgtctttt ttgtttttca cacttgcatt ccaagtatct aatgttttag ttagctcttc
     5401 ttttggtaca ttgattttgc cggctaattc atcaattgtt ttaccttctt ccacaaagcc
     5461 catttcttca tattgcgcga tagctttgac gcggtctttc acgcctgaat caaatactag
     5521 gtacgcggat ttttctggta atttgttgat ggaagctgta acgttatcac gtgtgtctaa
     5581 ttcgtttccg aaacgtttac cttcttgaga gactaaaatc gcaccttcac ctcgaacggc
     5641 ttcaccgatg aggtaagatt tatcttgttg aacagttggg tgaacttgaa tttgatccat
     5701 atccactgtt gttccaccaa gtttttcgat cattttaata ccgtcgccag tacttccttc
     5761 ttggttcgtt gttacatatc cttttaagtc tggacgttct ttttcaatca tatctttatt
     5821 agctccgtag ccaccagttg tgacaactac tgcatccgaa ctaattgttt tttcgtcttt
     5881 attgtttaat tttactttca cgccagttac ttttccgtct ttttgtgtaa tttcttttac
     5941 gtctgcgtta acgaaaaccg gaattttttg ttcttgaaca ttttttagta aaccgtctac
     6001 taagtattta ccaacagccg agccatcttc aggacggtgc gtacgttttt cgctcattcc
     6061 gcctgtgata gttaagttgt ttaatttaat gtccatggaa tccaaccagt caatggcgct
     6121 ggcggaattg tctacgaaaa aacgaagcat tgctttatcg tttgttccat gaccaccttt
     6181 taatgtttct tcgtaaaatt tgtcgttgct atcattaatt ccttcttctt tttggaattt
     6241 agtttcagag gcgttcatac cagaagaggc tttcattgtg tttccgcctg ctagtggcat
     6301 tttttcaagg attactgggt tcatgccttt cgcttttgct tctagtgctg cggacattcc
     6361 tgcaccacct gcaccaacaa taacgatatc gtatttatct tttaattcgg atggatctgt
     6421 gtaactagtt tttgatgctc ccgatgtaac ttctgttttt tctttttctt ttgttttctc
     6481 cgtgtcactt ttgcttgtgt tattgctgcc acaacctgcg ataattaatg caagcgatag
     6541 tagcatgatg aaagttgtag ctaacctttt tttcattttc gtacctccac ttttttgaaa
     6601 attttcccct agaccaatag tttgtgatta tattaacata ttatatcact aattgagata
     6661 tctttacagg tcatcaggcg aattttccaa aataagaaaa aaagcaattt acagattttt
     6721 ttacaatgat gtaaatgttt tctattacta ctcctcatta tttccacaaa gtgatataat
     6781 agcaacatca aatattaaag gagcatcgcc atatgacgat aaaaaagtac gaaccactta
     6841 acctctatac caatttcaaa aaatctgctg aacgctatcc agaaatgccc atccattttg
     6901 atgaagagct tgttactttt cctgaattag gccttcacac tacttacaaa aaatgtgaag
     6961 aggctattat ccaaaaagca gctcatctac ataaattcgg tgtacgcaaa gaagaaaaag
     7021 taatcgtata taaatctgcc aaattcgatt cttatatttt agcagttgcg atttcttata
     7081 ttggtgccgt gccaatcatg gtttccccgc atcttccagc gtctactatt gatatttttg
     7141 ttaatcgcct tgaccaacct tggttacttt ttgattctga gacttctgag aaaagtcatc
     7201 agttaaacaa tttaccagac agtagattga tcaatgctga acaattgttt aaagcgccac
     7261 tagatggcta cacatgcgaa caagaagaat taccaaaaga tatgattgct tatatgactc
     7321 acacttctgg aacaactggt gtgccaaaat taatcgctca ctctgcgaat tcgatgggtt
     7381 ggagaacgaa ataccaacga cgtattctta atttcatcaa accaagaggg cttgtagctt
     7441 tccatatctc accagtacat tctcgtttta atattggtgt ttcatccttg atgtcgctcg
     7501 gtttcccgct tctgccaatt gccaatccga ctaaagcaaa tgtcgaaaaa gtgctacgcg
     7561 aatacaaacc gtatgtgctc gaaacgcatc caaatcattt tgttcaatgg gcatcgcttg
     7621 ctcgtgaaaa accagacgtt ttccaaagta tcaaatttta tcattctact tttgatgcga
     7681 ttaataaaga aacaatggcg gttttccttc gtacttccga atataaaaaa ccaattttct
     7741 tacaaattta tggacaaagt gaatgtggtc cgatgatttt acgtggtcat acgcttcaat
     7801 ccattgaaac gctaaatgcg cgcgatatgg gaattggtgt tcctggttta acagaagttc
     7861 ggattgttga ccaagatggt aatcctgttc cagctggggt tagtggtaat attcaaatgc
     7921 tttccaaagg tcgcgcgctt acttattaca aagaagaagc tcgttttgaa gagaatgtgt
     7981 acggaccttg gtgggatagc ggcgattatg gtatgaaaga tgaacaaggc cggttattct
     8041 tgcaagatcg tcaagtcgat ttagtagaaa caattgatag tacactcgca attgaagata
     8101 aactgcttga tacgctgact ttcttagatg aagttgttat catccgtggt gaaaacggta
     8161 gcccgcaacc aattatcgca gttcataacg acggcgaaat gaactgggac gcatggtgga
     8221 aagctgtttc tgacttgcca catatgaacg aaccaatggt gatgaaatat gatgaaatcc
     8281 ctcgtactgc aacaatgaaa gtacaacgtt tgcagatgga acgagaattg aaaaaataag
     8341 tttcaaaaaa gcagctgcgt tatgcagctg ctttttcctt tattttcttc taagtgtaag
     8401 taatgctaaa ctcgtaagaa atgttccaat aaagattgga aaaagcacat ggtcatctcc
     8461 tgttgctggt agtacgatgt ggtttatagt atctatatca ctcgtattag gagctccctc
     8521 tgtactattt tcagagttac ctccaccttc atcggttcct ccaccgtccc caccagaaga
     8581 tgcatcttta ctaaactggg catacaaggt tatatcattt gctggcattt gattgtttgt
     8641 gaagtcccat tttgttccac cagttttggc atcataccaa cctttaaatg tataaccatc
     8701 cttagttggc gctggtggct cttccagtaa accttgatac tctaccgctt gagtagaaat
     8761 gacgccatct acatcaaaag ttgcggtata actattaata ctaaactggg catacaacgt
     8821 tatatcattt gctggcatcg tatcggctgt aaagtcccat tttgttccac ctgtttcagc
     8881 atcataccat ccgttaaatg tataaccctc tttgactggg gttggtggtt cttgtaaaag
     8941 tgtccctgtt tcgacatttt ccgttgtttc ttgcccgtca atattgaaag ttgctttaaa
     9001 atattgtact aatggttgtt ctacagtccc actgaaattt ccagttgcat taccaatcgt
     9061 atcacgttca ataaaggtat agctgacttt aggaatataa gtaggtaaat tccatgtaac
     9121 agcttcattc gcatacacac cgttatcgct aattgtatcg ggatcaatcg tttgttccgc
     9181 aatgtttttt attaaattag gaatcgttac agtgctttcg aaacttatcg gttcgtttac
     9241 gattaattga ttagtcattt gaataattgt tagcttcgtt aaactgttta aaggtctaat
     9301 gttactaatt ttattttggc ttatatcgag ccaatctaga tttattaaac tcgaaatacc
     9361 agttacatca ctaatttgat tgtttgatac gtataatgtt tgtaccttag ttaagccagc
     9421 gagtggagta gtatccacaa tttggttcgc tgataaatca agcaagaaaa ggttatttaa
     9481 attacttagc ccctgaagat tgttaatttg gttttcattt gcatatagaa cgcttaaatt
     9541 gcttagcgct tgtagctcat ctaggttcgt aagcttatta ttactaacat ttaaggagcg
     9601 gagttgatgt aaactattta ctccactaag gttctccaat tgattattat ataagcctaa
     9661 accctttaga tttgttaaac cgctcagtgg cgtgatgtca gtaacttgcg cgtcgttaat
     9721 atctagagct tgtaagtttt tcaagttact aagtgcgcta atgtcgctaa tcggatttcc
     9781 actcagctga agcatggtca agttagttaa gcctttaagt ggcgaaatat cgcttacttg
     9841 attaccagtt aaaattaaag ttcctaaatt ggtcaagtag ttcatacctt ctagggagct
     9901 gataccttta gaagtaaggg ttaatgaatt aatagtatct aaatctgttt gagtgacaac
     9961 ctctgctgta ctagactttc cgagtgtagt ttgaatttct gtcgctaaag catcatcggg
    10021 aaaaatctgg ctgattgcag ctggtggtgc agcggctgca tgtgcgtcta tttttataaa
    10081 tacattcgtc ccaataacaa tcgacaacgc caaaacaacg tacaaaaaca gtctcccttt
    10141 ggatttcatc ttgctccccc tgacaaaaag tttaatagta tcttgttccc attttcttat
    10201 caccagaaac ataaaaaaac agcttgaggg cgtccccgag ctgttttcat ttcatttggt
    10261 aaatcattcc gattgaagct ggtgcggact ctcgaaaacc aaattgtttg tataaaccat
    10321 ctgctggtac atcggcaagt aatgtaacac aagcagtttt atctaaattc gaatctatat
    10381 agtttttaat atgggtcata attagttttc cataaccatt accttgaaat tccggaagca
    10441 ctgctatatc agaaacgatg aacataattc catcaccaac gagccgcccc atgccaataa
    10501 gtgcattgtc ctccttcgaa cgtagcccca caaaatacac actcttcaac agagcctgac
    10561 gtgaaacttc aatagatcgg aaactaagac cagcatctac tcgaagttta acaaattcct
    10621 ccgcatttgg taaatcagtt gtaataatat aatccatttt caatctccta tcaaaaaaat
    10681 ctctttgaac caattgtcgc ccaaagagtt tcaatttcta ttttattccg caattttgac
    10741 aggaagtcct gcatcttgga attttttata taatgcttta tttattttgt tatctgtaat
    10801 tagtaaatcg atgttttctg ctgctgtaat gcttgcggtg gagattacgc ccatttttgt
    10861 atgatctaaa agtgcgatca atttgttagt acgtttagca agaagtcgtt ttagttcagt
    10921 ttcataaatg ttgaaatcag ttaagccttc ttccattgta aaaccttttg ctgacataaa
    10981 acataaatcg gcatggatgt tttcaattaa attcgcgcca agaatccctt ccagtgtaaa
    11041 agagttcgtc gtcacaatcc cgccagttaa aataacgctg atattcgggt tgtcttttag
    11101 ttcgattgct gtataaagtc cgcttgttat gacagtcagc cttgaaaaac catgtaactc
    11161 ttttgcaagc gccagtgcag tcgagctggc atctaggata attgtttgat tgttttttac
    11221 taaagttgcc gcttctttcg caatcgcttc tttttcttcg atgttgcgaa taatccggtc
    11281 attaaaatta gtaaatttct cttcgctctt taaaagtacc gcacccccgt gtactttttt
    11341 aatcatcccg ctttcttcta atgaagataa atcatttcgg atggtactaa tcgagacatc
    11401 caagatacga cttaattctg gtacagttat tttgctattt tggtctagta gatgaattat
    11461 tttgttttgt ctttcaaatg gaaacatccg ctcgccctcc ttttacctat caatgatttc
    11521 tttatgtata tacatattac ccaaaaaaat aacaaaacac aaatatattt tataaaacac
    11581 aacaaaagat agcactttac aataaaaaac aagtatgtta ggatataaat agcaattaaa
    11641 cacaattaaa aacagaaagg agcaaccaaa tgataagtat tgttttagta tctcacagtc
    11701 aaaaaatcac agaaggcctc caagaaatga ttgttgaaat ggttggagat acagtacata
    11761 ttatttcttc tggcggaact ggcgacgggc gtcttggcac aaatgcaatc atgatagctg
    11821 ataacatcgc gacttgcact aattctgaac atatttatat tttttgcgat attggaagcg
    11881 ctatcttaag tgccgaaaca gcactcgaat tattagaaac tgacctcctt gaaaaaacaa
    11941 ccatcatcga tgccccactt gttgaaggcg catttactgc cgctgttcaa tctctcgtta
    12001 atccatccaa agaagctatc ctacaagaac tcacaaacgt gcattaaaaa cgtaataaaa
    12061 cgcaattttg taactgggaa ctatgtaaat taatttttac atgacaatac tattttcgaa
    12121 aggagtttat tatgaaattc tttagaggaa tgattggttt ttgtatcgca ggtatgattg
    12181 ttatgagtgt ttggactcca cttgccgaga attatggtat ttttggaggt tatctggcag
    12241 ctttcattat tattggtcca atgtggttta tgaatcacta tgttggttta atcgaaaatg
    12301 atgaagacgc agcgtttgtt gatatggctg tcggaattgg gatttgcgga attatgcgtg
    12361 atgtctttat gcaaggtggt ggcgagttag taagttcgct tccaacgatt ggtcttgttg
    12421 cgattggagc agttctagct ggaatcgtgg ccgcagcaat tgaaaaagat atggcaaaaa
    12481 aacaagaagc aaaacaagaa aaaacagaac ctggcatgaa tatgaaagaa gaagagcgtt
    12541 taaacgaaaa tcaattagtc taaaaaggag tgtaaataat gagcattggt attgcattag
    12601 caacgattgc aggtggcttt ttattccctt ttgctattcg aatgatgtgg ggaaaaatgg
    12661 ttgatgaatg gggcgctatc ggaggttgga tggcagcagc atttatcgtt ggtacagttt
    12721 ggacaattaa tcatggtatt ccaaaatcaa tgatctatca atctggaaca gtttgggtag
    12781 atatggcggt tgcagctggt attggtgtat tcacagcttc ccttttaaca ggcggtaaat
    12841 tttctaaatc gatagtcaat ttggcagcag ctgtagttgg cggcgtgctt ggcggatttt
    12901 tactatcact attcttataa aaatatgaag gaggaagaaa aatgagacgt ttagtgaatg
    12961 atgggtatga agcagtagaa gaaatgttag ctggttatgt tgcggcacaa gggaaatacg
    13021 tagattttgc agaaaatgat aagcgagtaa tcgtaagcaa acaaatgagc gaagaacccc
    13081 gtgtgcggat tattgttggt ggcggttctg gtcatgaacc acttttcctt ggttatgttg
    13141 ggaaagattt cgcggatgcg gcggtagttg ggaacattaa tacttcccct tctccagaac
    13201 cttgttataa cgcagtaaaa gccgttgata gcggtaaagg ttgtctatat atgtacggaa
    13261 attatgctgg cgatgtgatg aactttgata tgggcgctga aatggctgcg gacgacggta
    13321 ttcgcgttga aacagtgctt gtaacagatg atatttactc tgctgaaaat gtagaagatc
    13381 gtcgtggtgt ggctggtgac ttaattgtat ttaaagcagc ggcatctgca gcagcaaaag
    13441 gacttgacct agatgcggtg aaacaagctg ctgaaaaagc taatgcaaat acgttctcga
    13501 tgggtgttgc gctttcttct tctacccttc ctgtaactgg taaagctatt ttcgaaatga
    13561 aagaaggcga aatggaagtt ggtatgggaa tccacggtga accaggaatc aaacgtactt
    13621 ccatcgaacc agctgataaa gtggttgatc aaattatggg ctatcttata gaagaaatga
    13681 aattaactgc ggatgaagaa gtgcatgtac ttattaatgg acttggcggt ttaccagtga
    13741 tggatcaata tatttgttat cgccgcgtcg atgaaatttt gaaagaaaaa ggcgtgcata
    13801 ttcataaccc acttgttggg aactacgcga cttcgatgga tatgattggt atgtcgatta
    13861 cactggttcg tttagacgat gaactgaaag atcttttaga tacaccgtgc gacacaccat
    13921 atttcaaagt ggactaaatt actactggag gaataaaaat gagcgaatta gttatggata
    13981 gcgctttttt cggccacgtt ttacaggaca tgggagcgct aattgaaaaa gaacgtgatt
    14041 acttaaccgg actggactcg gatattggag acggcgacca cggaatcaat cttagtattg
    14101 gctttcgtga agtgaataaa caattagacg aattactcac tgcttctccc gatattgcaa
    14161 cgttgcttaa aaaatccgga atgattctcc ttggaaaagt tggtggcgca tctggcccgc
    14221 tttatggcag tttctttatg aaatgtggcg ctgatgttcc tgggaaaacg gaggttaact
    14281 tcgacgagct ttgcggcatg attataaatg gggccgctgc ggttcaacat cgcggaaaag
    14341 ccgaacttgg tgataaaacg atgatggacg ccttcttgcc tggcgtggaa gtgcttcaaa
    14401 atcgagatac aaatgcagct ccaatcgaaa ctttttccgc atttgtagat gctatgcatg
    14461 ctggcgctca gtccacgatc ccacttattg ctaagaaagg tcgcgcacta agacttggcg
    14521 aacgagcaat tggtcacctt gatcctggct ctgaatcgtc ttggatgtta atgaatgtca
    14581 ttttagaaaa tttaaaaaag gcggtctgat ttatgcgtaa acccttagtt ggaattaata
    14641 tgaaaaacta tattaacact cgggctcaga catctgaatg gttagaagcg actatccctc
    14701 ttcttaaaaa tttttctgat gtggatacgt ttatctttcc ttctatgggc acactcgaaa
    14761 cgaccgccaa ccttttagcg gggacatcat ttggctttgg tccacaaaat atggcgccgg
    14821 agaaatccgg cccgctaact ggtgaatttt cggtggaatc tatcattgat ctaaacgcga
    14881 actatgtcga aattggtcac gcagaacgca aaaacctttt tcatgagaaa actagtgaga
    14941 tagcgaagaa gattaaactt gcattggacg aaaaaatcac tccggttgtc tgtgtgggtg
    15001 aagaagtccg tgcgaatgat acaaatgaat taaaaaatgc gctaaaaaaa caaatcgaag
    15061 cgctgtttca gacaattaat ttagcacagt gggaaaatgt tgttctggct tatgaaccgg
    15121 agtgggcaat tggaaaggcg tcttcagctg agacaaacta catcgaaagc gcgcatcaag
    15181 cgctgcgtga aattattcgc gaactaggcg gcgatgaaac gctcgtaaga attatttacg
    15241 gtggctcggt cagcaaagaa aacgccgcag aaattgtccg tcaaaaaaat gtcgatggtt
    15301 tattcgtcgg aagatttggc cataaaccgc aaaattttgc cgacattgtt tctattgtta
    15361 gcaaaacgaa aggatgagtt agtatgaaaa tcgcaattgg ttgtgacgaa atgggttacg
    15421 aactaaaaca aaccctcatc acacgtttaa aggagaaaaa tattgagttt actgatttcg
    15481 gcagttttga aaacgaaaaa gtactttatc caagtattgc cgaaaaagta gcactagaag
    15541 ttaaaaacaa cgattatgac cgagggatcc ttatttgcgg tacaggtatt ggaatggcca
    15601 ttacagcaaa caaaattcac ggcattcgcg cagcacaaat tcatgattct tattcagcag
    15661 aacgcgcaag aaaaagtaac gacgcacata ttatgaccat gggagctcta gtaatcgggc
    15721 catcccttgc cgtatctcta cttgatacat ggctggatag cgacttttcg ggcggacgct
    15781 cccaagcaaa agtagattta atggaagaaa tcgaccaaaa aaatagataa aaaatttatt
    15841 ggaggtaatg aaaaatgact tttaaaggtt ttgataaaga ttttaacatt acagacaaag
    15901 tagccgtggt aactggggca gcaagcggga ttggtaaagc aatggcagaa cttttttccg
    15961 aaaaaggcgc ttatgttgtc ttgcttgata ttaaagaaga tgtaaaagat gtcgcagcaa
    16021 aaatcaatcc atcaagaacg ctagcacttc aagtcgatat tacgaagaaa gaaaacatcg
    16081 aaaaagtcgt tgccgaaatc aaaaaagtct atccaaaaat cgatatttta gccaattcag
    16141 ctggtgtcgc acttctcgaa aaagcagaag atttaccaga agagtactgg gataaaacaa
    16201 tggaactgaa cttaaaaggt tcgttcctaa tggcgcaaat tatcggtcgc gaaatgattg
    16261 caactggcgg cggtaaaatc gttaatatgg cctctcaagc ttctgttatt gcacttgata
    16321 aacacgttgc ctactgcgct agtaaagcag cgattgtttc tatgacgcaa gtgctagcaa
    16381 tggaatgggc gccttacaac attaatgtca atgcgatttc cccaaccgtt atcttgacgg
    16441 aacttggcaa aaaagcttgg gcaggtcaag tcggcgaaga catgaaaaaa ttaattccag
    16501 ccggtagatt tggttatcca gaagaagttg ccgcatgcgc cctcttttta gtaagtgacg
    16561 cagcgagcct tattactggg gaaaacctaa ttatcgacgg tggttatacg attaaataaa
    16621 gtattcagct ttaaagttca gctgagagaa tggagcgagt aaataatgaa atttttcttg
    16681 gacacagcaa gcgtatcgga aataaaacga attagcgaac ttggtttagt ggacggtgtg
    16741 acaaccaatc caaccatcat cgcaaaagaa gggcgaccat ttgaagaagt aatcaaggaa
    16801 atttgttcta tcgtagacgg tccagttagc gcagaagtta tcggcctcga agcagacaaa
    16861 atggtagaag aagctcgaat tctagcaaaa tgggcgccaa atgtagtagt aaaaattcct
    16921 atgacggaag aaggtttaaa agcagtccat accctcacag ctgaaggcat taaaacaaat
    16981 gttacgctta ttttcactgt ttcccaagga ttaatggctg caaaagctgg cgcgacttat
    17041 attagcccgt tcttaggaag gctagatgat attggtacag acggaatgat tttaattaaa
    17101 aacttgaaaa aagtgcttga taattatggt ctaaaagcag aaatcatttc agcaagtatc
    17161 cgccatatcg ggcatttaga agaagccgct gaagccggag cacatatcgc gactatccca
    17221 ggaagccttt tcccgaaact ttggtctcat cctttgactg ataaaggtat tgaaggattt
    17281 ttaaaagatt gggaagcgtt cagtcagaaa gaaggcaatt aatatgagca gaattgatga
    17341 acaaatggtt aactcgattc gcgtattatc aatggatatg attgaaaaag cgaactccgg
    17401 ccatcccggt ttgccgatgg gagccgcacc aatggctttc tcgctttgga aaaatcattt
    17461 aaaattcaat ccagaacacc caacttggtt taaccgcgat cgcttcgttt tgtcagctgg
    17521 tcacggttcg gcaatgcttt atagtttgct acatctattt ggttatgatt taccaatgag
    17581 cgagctgaaa aacttccgcc aaactggtag taaaacgccc ggtcatcctg aattcggtca
    17641 tacggttggt gtcgatgcaa ctaccggtcc acttggtcaa ggtttcgcaa tgggagttgg
    17701 gatggcaatg gccgaggctc accttggcgc caaatttaac caacctgaat tcccggttgt
    17761 tgaccataat acctacgtgc tatgcggaga cggctgtttg atggaaggca tttcctacga
    17821 agccgcatcc cttgctggtc atttaaaact gggaaaatta gttgttttat atgattcgaa
    17881 tgatatctca ctggatggcg atttaaacga gtctttttca gaagacatcg aactcagatt
    17941 ccgagcagcc ggttggcaaa cgctacgtgt ggacgacgga aatgacttag atgcgcttga
    18001 tgcagcaatc catctcgcaa aaaccgagaa atcccgccct actttaatcg aagtgaaaac
    18061 ggtcatcggt tacggtagcc ctggtaaagc cggaaaatcg gcggcacacg gctccccact
    18121 tggcgaaaaa gaactcaaac ttgcaaaaga agcttacgat tggcaaatgc caccttttga
    18181 attaccaaaa actgtcgaaa atcagaaaga attttatcat tctaaaggtc gcgcgagtga
    18241 aagcagctgg ctccggacat tcaatgctta caaacaaaaa tatccagcac tcgcagaaag
    18301 tttgcaacaa ttaatggatg ataatttgga tgcggattgg gatgcagaac ttcctgtctt
    18361 cgatgaaaat gcggataaag ccgttgcaac ccgtgaagta tcaggaattg ttctacaaga
    18421 attggagaaa aaactgccta acctatttgg tggcgcggcc gatttggcct cctccaataa
    18481 aacccattta aaagctagcg aacggtttgc tccaggtaac tatgccgcca aaaatatctc
    18541 attcggcgtc cgcgagttcg caatgggagc agcagtcaac ggaatgacgc ttcacggcgg
    18601 tgttcaagct ttcggcgcaa ccttcttcgt attctcggat tatctacgtt ccgcgattcg
    18661 ttcagcagct ttaatgggca ttccatccac tttcatcatg acccatgatt ccatcgcagt
    18721 cggtgaagac ggtccaacgc acgaaccaat cgagcatctc gcatccttcc gcgccatgcc
    18781 gggacttcac gtcatccgac cagctgacgg caacgaaacc gtcgaagcat accgctatgc
    18841 ctttactcaa aaagaacaac caaccatgct cgttcttagc cgccaaaacc tgccaatttt
    18901 accaaatagc gcagcaaaag cgcaaaccgg acttgcaaaa ggtgcttaca tcttagccga
    18961 ttccccgctt gataaactag atattatctt actcgcttct ggatccgaag tacacctaat
    19021 gacagctgtc agagataatc tcgctaaaaa aggcttcgga gcacgcgtag tcagcatgcc
    19081 aagctttgat ttattcgaca aacaaagccc tgaatataaa gagtccgttt taccaaaagc
    19141 agtgaaaaat cgcttcgccg cagaaatggg cgcatcatac ggctggcaca aatacctcgg
    19201 cgacacaggc caaatcctcg cgattgattc gtttggtatg tctggcccgg gagatgagct
    19261 agcaagacga tttggcttta ctgtagagaa cttgacggag cttgcgttga agcagttgta
    19321 ggtatggaat aaacttttta acagtaacca atcaagtact cgggcataaa aaagcaggca
    19381 ttctctattt agaaagaaga gaatgcctgt atttatttga ctagaaatca atttcccact
    19441 ttactcagcg ccattaagct tagataaatc agcaagtagc ggtttcccat ctgcatccaa
    19501 aagtggtgac attccacccg cataaccaga caaatggtaa acatattgca caccggtttc
    19561 tttatcaacc caaatttcca taatgttgag ttttccttgg gtataaattt tttcaaatct
    19621 ttcttccatt gttttccgcc tcctgtttta aggttgcacg cattattcca ccctaaatca
    19681 atttaatttc cgaatcaaaa tattgctcaa taaaatgtac tttctctcta atttcctcta
    19741 tttaaagtat cctgttttaa ccaacttaaa gcctacttct ataaatttaa atttttaata
    19801 tcaacaattt ctggcattca cttaattgta ggcaattcct ttttcaaaga gcacatagaa
    19861 tttacaccta attccataga ctaagaaact atttccccaa taaataatct agctcttcat
    19921 ctgtccattg ttgatgaatc aatcccttta tctcatcaga taatcgtaaa acctctttcc
    19981 attctggcgt tgttctcaat gcttttacca cagaattcct ccatcaagtt caaaaagttt
    20041 agtttgcagc tgcttgctta gtaaagaaag ccctctatca attatgtcat tatccaccaa
    20101 caattcccta gtatatggac tcaaagcagc tggataatca attgctaact cttcaaatat
    20161 ttcatattca atttcttcgt cggataaatt aattgtatgc aatcctaaca tacatagcga
    20221 agaaaggtaa tattcaaaag actgttctgt tgttaatttt ttcaattgtt tcacctcatt
    20281 tattttttaa tattatagtc aatggatttg tgtggtgtgc gtgtattatg aatcgtcaac
    20341 tatgtaatct cgtatgttct ttcttagcat ttctaacaaa aaagctataa caactataaa
    20401 acacttgaaa atgaaggtct ctatttcttc aatttagaat tgactttgta tattttccca
    20461 aatttctatt ataagttttc catttattct agctgttcct aataagtctt ctgaagtcct
    20521 aaattcttgt gtttctccat cggatacttt cgttaagtaa tgtccttccc gatttttact
    20581 taaccaatat tcctcatttt tgtagtaaaa attatattcc tcaccatatg ctaaactatc
    20641 agccatttgt tcatattcca tgcttctttc cttctttcag aaacaggttc tctatttatt
    20701 aaaaaagcac attactttaa actccctcta tccgttcaat cactccggta gttcatcctg
    20761 tctcggtttt cgaacaagtg taatatattt ttcctctact gcgcagaatt tcgcataatt
    20821 tatttttgct tgttttaacg aaatattatt agctcctata atttcatccg gatactcttg
    20881 agctaccaca tcatattccc agtagcatac ttcgcaaata tcgtaattag cttcaatcgt
    20941 ataattttca caaactggac actgtttcaa agttattcct cctcatcatt tcggataata
    21001 taaatcaatt tgtttctccc aatattttaa tccagcatta ggtttgaaat atgtagatat
    21061 agatccatac tcgtttataa tcccaaattc atttgtttta gaatcatacc taaaatataa
    21121 taccctacta aatgttcata accttccaat aatccacttg ttgtgaaaaa ccctacatcc
    21181 aataccttat ccattaatat ttttccaaaa agctcataat taaatttgtt aaagtgctca
    21241 aatcatttca tttttctatt ccgtactttc taaaaaataa ggttatcaag gatctacttt
    21301 tacgacgcta attgagatgt ggagtgtttt ttacttattt actttttcta taacatctat
    21361 attgaatcta tcaacattta atgcaacaaa ttgattttcc aaataccaaa aatcagaaat
    21421 atcctcatct gctaaatcaa tctctatccc tgaatctatt ttcttactag aaggatgaaa
    21481 aacgcctctg ataaagtatg caaaactatc tgctacttga gttatttcct tagcttgtaa
    21541 agtacttttc tcaatatcta aatcatcgaa aacgaccgtc tctaactcaa caatatattc
    21601 ttggccaacc tctactgaac atttgtattc ttcaacaaaa cataaaagtt caatatcttt
    21661 tattttaatt ttcaactctt cttcaatatt aggattttct gaaattattt ttgcttcata
    21721 tctcatttat tattctccta ttctattgga tttatcacat ttatatgctt gtttccattc
    21781 aataatttat atacatcctc gccgcgtttc acatggtagg tcgtaatatc tccagataag
    21841 ttagtaccaa caaattcaaa ttttgctttt cctttactag tgttccccat aaacttcaca
    21901 tagccagttc tcaactcggt tgttccatcc ttcaatgtat aattatattg tactttttca
    21961 ccattcttaa ttacattatt cgcccctttt agatattcat ttatattcga atatgcacct
    22021 ttaaactccc ctccatgttt tgtaaaatgg ttttccaatt tttctatatc gtcaaattta
    22081 agtccactgg atttcttagg tattatcgct ttatttctag ctgctgcaat cccaaaccct
    22141 aaacctaatg ccatatctgt caacccagca tcatctgtcc aatctttcat actagccaca
    22201 taagcggatg accgcagtgt ggctccagaa aatccagata ctttttgacc atttaaatag
    22261 ttgataccct ctttccaaga atcattcact tttcgttcga gttcttctcc agaaaggttg
    22321 gtataaagaa gtgggtctaa ttcctgacca tgtttttcta agaaatcttg taattccttg
    22381 ttttctactc gttttccatc tttttcaagt aaccacatcg tcacggtttc gccttgatca
    22441 ttgacataag tataagctaa cacggtgtaa tcttcaaaag ctttcggaaa ggggtcttgg
    22501 tcattttctg ttcgtgcgtt atccagcgct tttttcataa gcaacaagct gtttaccgca
    22561 cttttcggca cggaataagt ccctgtttta tcgttaaaag tcacatgatg tagcaattct
    22621 tgcaccgcac gtccggttgc tcgaatgagt tcgtctaacg cactaaaaaa ctggccatga
    22681 ctttgttcaa aagctaaata tctttctagg atgttctctt tttcgattgc cttcaataat
    22741 tgtgtatgaa cacttcttga tttcactgca tagacttgtt gcatatccgg cttcgtgttc
    22801 ggcgccgtca attgtcgatg caagtcttct tcttttcgct gtaactggct aaccttggcc
    22861 atcgcttctt gtaagatttc tgcatcaatt ctggcagaag gcgaactatc cacttggctc
    22921 ccgaactcgc gaatatattg cgctagtcgc tcttcgcttt catccagtgc ctcaatgatg
    22981 ctctggcaaa tacttgtata ggtactagaa aaataccgtt tggaggtact aactgcttcc
    23041 ccttttaaac gattgtcctg ggcgtaatcc atcgctgctt ctttaatttt tctaatcatc
    23101 gctttggctt ccgcattact acttcgcaaa ccgtggagaa agtcattcaa ttccgcaata
    23161 tctatccggc tcacttgctc cactcctttt gtaaggtggc ttgtttggtt tctaacgtgt
    23221 ggagcctggc cttattttct tgtaattccg tgtctaaatc gcttctttta tcctgaagat
    23281 cacgcctcca agcctgagat tcttcgtgtt gctgctcttc taaaaaacga tgaaaaccac
    23341 tggcttcttc accttgccag ccactgcgta aaaagtctaa taacaccagt ttttcttgtg
    23401 ttaattggtg gctgtcctct tctaaccaat cttgttcatt ttgttttctt ctcgtttgat
    23461 cgacatccgt ttctgccatt attttcgctt ttttaatttg ttggagttgt tgttctagtt
    23521 ggcggtgtgc gctatccaat taacgcacct ccaactgatt gattttttgt cccatgacct
    23581 ggtcttgctt ggcataggca atacccattt tctttaatcg gcccgcatct tgcttggtca
    23641 cgtgttgaaa atcctccact acgcctacca aatcaatcaa tgccgaccgc aattgatcaa
    23701 ttgaattggc tctggaataa gccatgttcc cgttttttaa tggtaagtat cttcccgaac
    23761 ttttacttgc caatttggtt gcgtgttgtt ggaaggttac ttcgctaact tttatttctc
    23821 tcatctgcat gcttcctctc tatgtaaatc cttccccctc attatagcac cggtagcaca
    23881 cctcttttgt gagcattctg tgaaacaatt cattgaaaaa cagcttaaaa tcagcttttt
    23941 aagtgaaaaa attaacattt catcttctaa ctaagtcaat accaaaaagc ctctctttaa
    24001 agacaggctt ttgggctatt ttcttttggt tgtcagctac actctatcta aaataccatc
    24061 taacttattc aaatcaatct gcgaatcgtc ttcataagca cgcactatat ctctttcatt
    24121 atcatttaag tcactctctt tttttctttt tgcactctta tataaagcat tgactaacat
    24181 tttatgtttc aagcggagtt gctgtgtatc tagtctccct tttaaacaaa atatgtcttt
    24241 taataaaaaa ttagtttttt gaaggttttc tttgaccgtt aattcgatgt tatccgtatt
    24301 ttccttgcgt gttggatcat acattccagc tgaaataacg attaatttac ttgacaaagt
    24361 tttataattt ttagaaaact tatcaaatcc gagtactttt cccatataga tcgcaccaac
    24421 ataaatgatt tcatcggctt caacgattga ttcaggaata gattccacag aatacattgg
    24481 aatagctttc ttctgactaa gctctgttgc atatttctta ctggtgccgt attgacttga
    24541 ataaataatc attttattca tcatcttcct gctcccttct ttataagctt ccatattatt
    24601 ataacattca aaaacaaatt gtttgtgtgc atttcatgaa cgttttatag ttcacattag
    24661 aaattagaag gaagcttttc atcattactt cctgttagat ttggttcaat aagtaataaa
    24721 agccttataa aatatcatta tttaatgaat tctataaggc ttctattatt taaagattat
    24781 ccatttattg gttcgttttt ggttttctaa aaaggaatat actagcaacg agtagcatat
    24841 taaaaccgat taaaactgct aatgccatat tttcagtatc tccggtggca ggcaacgtat
    24901 tattgtctac ttttagcttc gtatcagcac ttggtggttg gtttgttttc cctttaactt
    24961 taggctcatc tttactaact tgtgtatttt tcttgtattt aaaagtaact gtttgcgatt
    25021 tttcggtaaa aacaccttta gcagaatcat cgccaactac gctatagcca tcaattgcct
    25081 tggcttctac actataacta tcatcaatat cccctgtaac ctttttagaa tcagccaatt
    25141 tcttacctga ctcatctaca tactgaactg ttatttcgcc tgattttttg gaaggcgttg
    25201 ctgtagtgta tgtgaaagta atagtttgcg gttcttctgt tatcttacca cttgcaattg
    25261 ctcggcatga ataaccactc accgtttgcg cctcagcttc aaaatcatct cctacttcgc
    25321 cagttatttg tttatcttcg gcaactgctt ttccatttgc atcttcgtat ttaatcgtta
    25381 caacaccagg ctcgattgct ttataatgaa acacaactgt ctgctcaact gttgaaaata
    25441 cgccgcttaa agtggcatca catttgtatc cagctataga tttcgcgtca atagaaaatg
    25501 catcatctag attaccagtt aaggtctccg ctgcactaat ttctgctcca ttttcatcta
    25561 catatttcac atttactttt tcagcagcag catcacttac aatgacgctt acttctactg
    25621 gattggcagc ttggccatct tcattcgtag cagtcagtgt gaccgtataa gttccaactt
    25681 tattaatatc tactttttct gcaaaatcgg ttttaatttc cacgttagct tcatcgattt
    25741 ttgcatcact atcatataaa aatcttcttt catctgtttg ttcatgtttg ttatatttta
    25801 cttctgcatt cgctgtaatt actggtgcac tttctgctcc aatgtgaaca attacttcaa
    25861 ttggtgtaga gacagcccca tcttcgtttg tagcatttat cgtaacagta taatctcctg
    25921 ttttacttct atctactacg gaatcaaaat tacttgttgc ttttgctgta cttggggctt
    25981 ccgctccttc taaatgaaca tctttgaaga aatcagattc ggttacagct tcatttttcg
    26041 catagcttac ttctgcatca gcttttaacg tcgcggctgg ttctttattt attgtaacgg
    26101 tcactgctac tggttctgcg ctaatgccgt cttcatttac agcattaagc gtaactgtgt
    26161 agctcatggc tgttttgaag tttgtcgcgg tctcgaaatt agaggtgatt acagttgagc
    26221 tttgaccatc actacttgtt gcatgaatat cttctaagaa cttcgcttcc gttatgttag
    26281 cgaacttgtc ataggaaata gttgcatcgg ctgttataac aggacgttct ccttgttgaa
    26341 catgtacaat tacttcaacc ggtgtagcct ttacgccgtc ttcattcgta gcatttaatg
    26401 ttaccgtgta atcgccagct ttatttaaat tcacatcggc actgaagtta cttgtaatcg
    26461 ttacattttt ttcattaata gttgcatgaa tatcacttaa aaattctgct tcacttactt
    26521 catcaaattt cggataggtt atttccttat cagcagtgat ttctggcgct ggaagttttt
    26581 ttactatgac agaaacttct tttggtgccg atactccgcc atcttcattt gtagcagtaa
    26641 tcgttactgt gtacgttcct gggacgtcta gtttaactac tgtttcaaaa tcactttcca
    26701 aaactgcggt tgttgggctc gcgttaatac tagcatgaac atcttttaga aattgcgttt
    26761 cattaatctc cgcatatttt tcatattgtt gtgccgtatt tgcgctaatc gttgctattt
    26821 tctctttctc cacatggaca ataattgcag ttggcgtaga cgctacacca tcactattaa
    26881 tagaattcag agtaacagta taatcacctg ctttatctaa attaactgct gtagcaaagt
    26941 tagaagttat tatagagcca tcatttgtat ctgcgtctat atcatctaag aaagctgctt
    27001 cggttttttt agagaatttg tcataagtga tgtcagtttt cgcacttata atcggcgccg
    27061 gatctttgtc tacagtaaca gtgacataga ccgtttcagc tttcacgccg tcctcatttt
    27121 cagaatttag cgcaacggta taatctccgc ctttattcaa gttaactgct gtactaaaat
    27181 tagttgtaat agctgtattt aaatccgtac tcgcatgaac atcttctaaa aattgtttct
    27241 ctgtaatagt cgcatgttta tcataattaa ttgtttggtc tgccgaaatg acaggcgctc
    27301 cgtgaagaac tttgacaatt actttgcaac tatccccttg gattccatct ttttcagaag
    27361 ttagagtaac ttcatattca ccaaaagtgt ttaaatccac cactgtagca aaatcacttg
    27421 taacaggtgc accgtctgat gattttgcat taacatcttt taaaaactgc tcctctgaaa
    27481 tagtatcacc aattgtataa gtttgctctg catttgcagt tactttaact gcagatttat
    27541 aaggttgggt gattgttcct gagaaggtta aaccatcttt tagcctatta aagttaaatt
    27601 cagtggaact ggaggctgcg gtcatgttag tccaagttat ttccccatcc ttgtaagtac
    27661 cagagtgcgc tatagatgat ggcgctagtg gtgtgccgtc ataccaaaca accggattat
    27721 ctatggtaaa tgagctttga tatgataata cagttggcaa tgtatatgtt tgattactcg
    27781 cagtaacact cgccccccga ttaaccatat tagcggcagg actaatatca ataattttat
    27841 tttttgatag agctagcttg tttaaattat ccagatcact aagtgctgaa atatcttcaa
    27901 tctggttgtt ttcaagtgtt aattcttgaa gagtcgtcaa attagataag gcagaaatat
    27961 ctttaatttt attggaatct aaatttaagt agattagtct tgatagggtg gaaagcccac
    28021 ttatatcact aatataacca ttatctcgca aatttaattc cgttagattt gttagatcac
    28081 ttaatgcact taagttccct tctgttccag tgtaattaag gtaattgttt tgtaattcta
    28141 aatttctcag cttagaaaca ccgtccatcg ttcctaggct tcttaaataa gaataattgt
    28201 ctgtaacttt taatatttct aacttgggta agtcgccaat tggagcaagt gatggtattc
    28261 tgttgaaaga taaatctaca taagttaatt ctggtaaatt atccatcgta ccaatattgg
    28321 taatcaaatt attttgcgca taaaacgtct ccaaacttgg taaatcatgt ataacggatg
    28381 tatttgtaat tctatttgaa tgcacatcta ggttttgcaa ttttggtaaa ttatcaaagg
    28441 tacctatatt tgtaattaag ttattactcg catccacttt tcttaaattc ggcatatcgt
    28501 gaatcatcga aatatctgat acattgttgt tttgagcgta aaattccttc agtgaaggta
    28561 attcagtcat tttaccgact gtcctaatga cattatttga tacattaata taatttaaac
    28621 tcgggaaatt tgttagtgta ctcacatctg ataacctatt cgaactaaca ttcaaccatt
    28681 ctaatagtgg taattttttt aattccccta ttgttgtaag ataatttaca cttacatcta
    28741 aatagcttaa tcgaggtaag tcgtttattt cacttatact agttagttga ttttccttga
    28801 gatctaattt ttctaattta ggaaggttat caagcgttcc aatagatgta attccgcagc
    28861 catccaaggc taatgttttt aattgtggca tatcggtaat tgcattaata ttggttaaat
    28921 ctttattatc tgagagaatt aatgtctgta atttcggtaa attattcagt gttcctaaat
    28981 cttcaatcgc acagctatct gccgtaatat tcaccaaatt aggcaagtcc ttcaagcttg
    29041 tgatttcttt cagtttacta caaccactta attgaatcat ttcgagttcc gaaagcccgc
    29101 taatatctcc aagcgtttct aaatcggtac agttactcgc atcaatcaat tgaagcttcg
    29161 tcgccccttt taatgtcgct aaacttttta aagaagcatt ccctttaata tagagattct
    29221 ttagttttgg aagttttgct aatgaagtta agtcggttaa atcattttct tgcaagtaaa
    29281 atgtttctag ttctggcaaa atagcgccag ctggattatc taattccaat gttttaatat
    29341 tacagccttg cgcactaatt tcttttaaca ctggtaatgc tgcaacttgt gaaatatctt
    29401 ctaacgcctt atttgcagag acattaagtt cttgcaaatt aactaaaccc tccacccctg
    29461 aaagatttac taatgttcga ttggaagaaa ggttaagtga aaccaggttc accaaatctt
    29521 taattggggc caagtcagat atattattct cacttaaatt caggctcgtt aaattctcta
    29581 aatattgtaa tccttcaata ttggaaatat ccgttgggtc attgcccgtt tccccactca
    29641 aatcaagttg gcttattgct aaaagagctg cactatccac tgattcatta cctgttgcag
    29701 ccgcatttcc tgtgataatc acggctaatt ttttagcaag attgtcgtct ggaaacaaag
    29761 aattatatgt gcttcctgct ggtactactg cttttaaatt agtttgtttc aactgacttt
    29821 tgtctgtatt aatttctgtt ttaatattag aagccggttc ttttgttttc gctttttcct
    29881 ctttttctgt cgtttctttg cttgcttctg cttcttttgg ctcttctgcc ttttcattgt
    29941 ctgaaccaga ttcgctttct gtagcttcag tagcagtttc tgtttctgcc gttttcactg
    30001 tcgtatcttc ggtgacagtg gtttcatctg cacctactaa tagagtatca aaaggcgcta
    30061 aataaccaag
//
LOCUS       DASDYK010000023        29701 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.023, whole genome shotgun sequence.
ACCESSION   DASDYK010000023 DASDYK010000000
VERSION     DASDYK010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 29701)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29701)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29701
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.023"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(16..363)
                     /locus_tag="U0308_001050"
     CDS             complement(16..363)
                     /locus_tag="U0308_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEM2316020.1"
                     /translation="MMVKRGDVYYADLSPVVGSEQGGIRPVLIIQNDIGNRFSPTVIV
                     AAITAKIQKAKLPTHVEATRKDGFERDSVILLEQIRTIDKQRLTDKITHLDEDLMAKV
                     NKALEVSLGVVEF"
     gene            complement(367..645)
                     /locus_tag="U0308_001051"
     CDS             complement(367..645)
                     /locus_tag="U0308_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family ribbon-helix-helix protein"
                     /protein_id="HEM2316021.1"
                     /translation="MLEKEKRMIISVELTQEMIQELDVVVEKEKMGRSEVIMEATQQF
                     LQEKRARELRDEMERGYAEMATINFAIACECTHVEAEAEDRNISILGG"
     gene            complement(851..1957)
                     /locus_tag="U0308_001052"
     CDS             complement(851..1957)
                     /locus_tag="U0308_001052"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEM2316022.1"
                     /translation="MVTGWHRPTWIEIDRAAIRENIKNEQNKLPENVDLWAVVKANAY
                     GHGIIEVARTAKEAGAKGFCVAILDEALALREAGFQDDFILVLGATRKEDANLAAKNH
                     ISLTVFREDWLEELTLEAPLRIHLKVDSGMGRLGIRTTDEARRIETTIAKDNQLQLEG
                     IYTHFATADQLETSYFEQQLAKFQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRF
                     GISMYGLTPSTEIKTSLPFELKPALALYTEMVHVKELAPGDSVSYGATYTATEREWVA
                     TLPIGYADGLIRHYSGFHVLVDGELAPIIGRVCMDQTIIKLPREFQTGSKVTIIGTDH
                     GNTITADDAAHYLDTINYEVTCLLNERIPRKYIH"
     gene            complement(1976..2332)
                     /locus_tag="U0308_001053"
     CDS             complement(1976..2332)
                     /locus_tag="U0308_001053"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEM2316023.1"
                     /translation="MIKGIGLDMIDLERVKQVVEKNPRFIERVLTEKEIKQFEKYEGN
                     RKIEFLAGRFAAKEAYAKANGTGFGKHLSFTDVEILQVEDGRPHVTLPVKSGENVFVS
                     ITHTARSAAAQVIIEI"
     gene            complement(2334..3713)
                     /locus_tag="U0308_001054"
     CDS             complement(2334..3713)
                     /locus_tag="U0308_001054"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HEM2316024.1"
                     /translation="MKHIVIIGGGLSGLAAAYELQKTHPNYTWELVEKDKKLGGKFET
                     VKRDGFLIEKGPDSFLARKPAGVGLVKDLGLEDKLIANATGRSYIYHQKALHPIPEGS
                     VMGIPTDKEALLASTLVSEIGKARALQEPTMERNNQEQDQALGEFFEARFGKELVKTI
                     IEPLLSGIYAGDIYKMSLRATFPQFEQAVKKYGNLMDGLKESSMQTTGTKATIGAFRT
                     LEGGLDALPKAIAAALPKENLHTAKQATNITKKNSSYEISFVDGDKMEADGVIIAATH
                     DALIHLLAEKTTEPFAGQPLTTLATVSLAYNEQDVPILPDGTGYLVARTAPYKTTACT
                     WVQKKWPHMVPENKMLLRGFVGKAGETWLEQASDEAIVSAVLRDYAEMMDLHAAPLFY
                     EVSRMKSAMPQYLVNHQDRLKQLKKNIKADYPGVYFAGMSYEGVGIPDCIAGAQTAAK
                     ELVDYLEEV"
     gene            complement(3863..5338)
                     /locus_tag="U0308_001055"
     CDS             complement(3863..5338)
                     /locus_tag="U0308_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEM2316025.1"
                     /translation="MFEERRLHPIALIKEIITNVRRNIVPIVVGLFSVFRAINSNGYL
                     PDWAVYLIIVIVILLILTPAVLKYITYKYTLEDQGIRIKYGLIFRKNTYIPYERIQTV
                     QKKQWFFFIPFNVCQILIETAGGNGKAEADLVAVPVGVVDELNDLRDGKKRDIQEAVP
                     ETEETTVEVAEAPEKTVMLQTKQLILMAVTSGGVFGTLLIVLAFMQQFREVIPTDWME
                     AQAEELWKMGIIVLIVLIVLILLVLWGISIVTTLFKYFQFKLMKYPNSLVVEKGLLER
                     NHTTISLSRIQGITIIESPLRQMLGLVAVKVTTAGNSGDEKLSGDILLLPIMKKALAL
                     KTLKEMLPDYLFEIEKMERAPKASLRRFLQIYLIWTIIPAAVASILFFPLGLISIILP
                     VLAGIKGVTSYRATGVFTDKHTLLVQSRPIFSKLTHIIRKERIQGLSLRQSIWMEKGG
                     SRHLNVWLKSGSTSAEAYVRYINQDLAIKVYNWYSPSKTIN"
     gene            complement(5331..5813)
                     /locus_tag="U0308_001056"
     CDS             complement(5331..5813)
                     /locus_tag="U0308_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEM2316026.1"
                     /translation="MELDNLEKKLPEKIKTVWRQTEGIAVLTFLLCSVVAAIILYYAG
                     ASVWWSAIGFGLTVLYAAFIYLFIIPFRFARWSYQIKPDEMEIQHGIIFRSRVLIPMI
                     RIQHVETEQGPLLRRQKLVSLSITTAAKTHKIEAVNESESDELRHHILELVKVAKEDV
                     "
     gene            5946..6422
                     /locus_tag="U0308_001057"
     CDS             5946..6422
                     /locus_tag="U0308_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316027.1"
                     /translation="MKKKGYILLIIALLSLTLNWLPEIAHAQKEATGTTYTTATTNEL
                     MDMFLPHSIQNPYIETTKNSAELMFVTEEAATITTETNNQTQSIAGSTENHQFALANL
                     QPGNNLVTITATMTDGTSESKTITINLPEKPKKNSKSFHDHSKNQQVTHRKKGHLL"
     gene            complement(6468..7856)
                     /locus_tag="U0308_001058"
     CDS             complement(6468..7856)
                     /locus_tag="U0308_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM2316028.1"
                     /translation="MKKRWLVFAIICLIITGFLSPKAEAATDYGSSFFTNVSLQNQNG
                     EQTTNFKENSKVRVAYDFVITQPVASGETMTLTIPNQLKLINYGGFPLMDSQGNTIAN
                     ATIDQATGTITLTFTDYVNTHTDLSGSLYYNATFNSKNIQTDQVNPIAFPVKNSTQTI
                     NAFISKVNTGGGTGSPTIVFKQGRMDDKDLSILHWTVTLNNALTPIDNAVYTDTLGSG
                     QNLLGSATIKYRDANKKVITTNIQPITLDADRNFELSIGTLNNQSVVITYDTKITTKQ
                     KSYTNKATLSGDNLEAVSRNATVNDYGSGGQGTGTPPAPPVKEEPPFIPAEKQLIEKT
                     VETDFGPLEIVKDSEQNGKIKVIYKVKDGDTLPGVANKFDVSVAEIKDWNNLTSDTLQ
                     AGQKLQLTIEKTLLSKITIPPVQKVTSTTSVDGVVKATGVLPHTGDSNPFIPFVTGVS
                     LVALGFTFGRRN"
     gene            complement(7974..8741)
                     /locus_tag="U0308_001059"
     CDS             complement(7974..8741)
                     /locus_tag="U0308_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEM2316029.1"
                     /translation="MNIKEKIAVQLYSVRKEMERDLEGTLRKMHEIGFRYVQLDGMRG
                     NDPSEVRRLLQKYELKVIGMHIKHDRFMNDLDGIIEEAYFFDCKTVFDKYIEEEDQTT
                     AGYTATKAALINAAEKLHPLGFRIGLHNPEYDFNECIHGRRVMDYITDPVDGICIYAE
                     PDTYWIRAAGHDETEFIKRYSGRAPIVHMKDFVSGFELEDMDNNLVEIGQGEVDFRAI
                     IEWGEANGVEYYCIEQDRSKRAMFETLEASYQYLLQL"
     gene            complement(8759..9712)
                     /locus_tag="U0308_001060"
     CDS             complement(8759..9712)
                     /locus_tag="U0308_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2316030.1"
                     /translation="MEKIIVNGRKNGQKIEIACSNLVMGAGDFLRADNMDFAGPVLDQ
                     YFEMGGNIFDTARHYRHSEKAIGAWMNMRGNRDSVIIQTKGGHPVREASDVPRVTPEA
                     IHEDISVSLDTLQTDHVELFALHRDNPDVEVGPIMEAMHKEVEDGRVYAIGLSNWELP
                     RIIEANEYAVSHGLTPLSFNSPNFSLAKVNRPRWENCVSASEEMIRWHEATNLPLFSW
                     SSQAGGFFSGRFSEEDTRDTEMVEVYYSEANWERYSRAKQLANQKGCTPIQISLAYVL
                     TQSFPTAAVIGPENATELQSSVAAAGIKLTASEVDWLDLKA"
     gene            complement(9712..10440)
                     /locus_tag="U0308_001061"
     CDS             complement(9712..10440)
                     /locus_tag="U0308_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HEM2316031.1"
                     /translation="MKLIINESEQLVAQTVSQRIIELVKEKPASLICIAGGDTPLLTI
                     EALIKANQTGEVDFSETQFVGLDEWVGLGRETKGSCIQTLYDAFFDRLKNVSSEQICF
                     FDGKATSLTDECARVDKFIDDRGGMDFILLGIGLNGHIGFNEPFVPVDVNCHVVELDD
                     VTKRVMSKYFDTDLPLTHGISLGMQQILAAKEIYLVATGEKKIDIVKQVVEKEPTVAI
                     PATLVKDSNTTLVVDKIAASGVEA"
     gene            complement(10461..11786)
                     /locus_tag="U0308_001062"
     CDS             complement(10461..11786)
                     /locus_tag="U0308_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2316032.1"
                     /translation="MSSKNKQSFMNRFIAFMEKYFEPVAARIEKQRHISSIKNGMIAL
                     ISVLIIGSFSLIISAIGNMFPAGSVVKEFFVQNAAALNLPFQFTFGLLSIYAAITISY
                     SHAKQMKVPVLHSVMAAVMVTLILNTKMVDGVLNTEFLDSRGLFIAIFAALISVELIG
                     LFIRKNITIRIKGLPAGIATTFEAIIPLVVLLFSAVGLSILMQSVTSGQIIPEAFTTM
                     LAPAINSIDTPYAVFLICFLEMLFWFIGLNGYAILIGFVLPFMTQYLGANAAAYAAGE
                     PIPHVFAPNFWDYFMGFSGSGITGALVILALFSKSRELKAVGKVLVVPAIFTISEPVV
                     FGLPICFNPYLFIPFVLGTPILAVGQWFVFHFGWVRPPIANVGGTPIPLAQYLATMDW
                     RAIILIIFVLAAAVCMYYPFFKMYEKSLIKEEEVVSERQAAHDALDLDF"
     gene            complement(11806..12141)
                     /locus_tag="U0308_001063"
     CDS             complement(11806..12141)
                     /locus_tag="U0308_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2316033.1"
                     /translation="MEINQLHVLLVCNLGASTGVMVTKMKEIAQNSEKLTNTDVKIEA
                     HPAGELREHIEDFDVILVGPQIKHQLKHLSEIAAEYNKPIQVIDTKDYGTVNGANILK
                     DAIILKLNK"
     gene            complement(12142..12471)
                     /locus_tag="U0308_001064"
     CDS             complement(12142..12471)
                     /locus_tag="U0308_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2316034.1"
                     /translation="MDIEKISFSLISLAGDSFSKLIEALQAAKESDSELVEQLLKEAD
                     DLMIEAHKVQTEMLIQETRGEQANFSVLLVHAQDTLMNTILASTLIREMIEMHQEIKT
                     LRKEEEK"
     gene            complement(12486..14504)
                     /locus_tag="U0308_001065"
     CDS             complement(12486..14504)
                     /locus_tag="U0308_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2316035.1"
                     /translation="MKLNQQCIQILDFLMEQEDFKNIGYISNALGCSERSVRYSLEKI
                     DIFLHEQTLPALIRHTRKGVLLPEKNIVNPVVRKFKQQITPKKYRYSQEEVQQFLLLK
                     LLLSEEVLPVTYFEEVLFISRSSVLNHLRAIEGELFLNNLDLSHQPRHGFLVTGNLIT
                     KTSLFARSFLRFINIREFYQFLDSENSLSKKGELFFYNLFELEILQEVNREAHSVEEN
                     MTRAMDEQLYLTLIAILLKQHEAKPDFQFTADFMIKDELDQALATIIGSLKQYQYGRE
                     DEAVIEAFVTGICEKMGEIYQVDFVHGDTDFFTQIKAHIKLMIRRVRAGVTIENPIFN
                     EFMRDNREIFMRVKESLDALKPLLPISVSSQEISFLAIYFASEVQRNKQTVEMKPNLL
                     IICPEGVAVSKMIAIQLKRMFEFESIQTIGLRKFKRAMMADFDFVISTVDLPDMQDAK
                     VLRIHSYLQKEDMELLQKHLRMKLIKSDKQIINKFSKILAIIGENTQITNLSKLEFDL
                     LEALISDEGETPKRLIPPFQFTEEAIVMEETCPTWRQAIKLGTKCLEHLEVIEPSYHE
                     KIIHNLKAYGPYMVVAPGVVIAHAGASDGVLMDGIGVTIIEDGIMFFDRYEEPVHVIF
                     TLALKTKEAHLIVEQLMKLALDEEKMQKIKMASSKRDIYHYVKSAIFE"
     gene            complement(14712..15878)
                     /locus_tag="U0308_001066"
     CDS             complement(14712..15878)
                     /locus_tag="U0308_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2316036.1"
                     /translation="MDMKKVNPNLTLLALAISAFGIGSTEFISVGLLPLISSSMGVSI
                     STAGLTVSIYALGVMVGAPVLTTMTAKMNRKNLLLLVMLVFLIGNLVSAFAVSFGMLL
                     TGRVVAAFAHGVFMSIASVIAADVVHPSKRASAIAVMFTGLTVATVTGVPLGTFIGQL
                     FGWRMSFLFIVAIGVIAIIANFFLVPKNLSNGKSISFKAIGQLLVNKKIVMVLLMTAF
                     GYGGTFVVYTYLSPMFSGMGYSTSMIVILLIVYGVMVAIGNTIGGHFANERPAKALFV
                     MFSLQGITLLLLQFTSTNAIFGLMTIMLMGFFAFMNVSGLQLYVVQLAERYLPETVSM
                     ASALNISAFNVGIAVGAFIGGLVTEYIGLGYTPIVGFLMVFIAIILTFYMKKDK"
     gene            16006..16359
                     /locus_tag="U0308_001067"
     CDS             16006..16359
                     /locus_tag="U0308_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2316037.1"
                     /translation="MTKVYNIGVEATLEVIGGKWKPVILCHLREGKKRTGELKRLIPN
                     ITQKMLTQQLRELEKSGVIVRKVYEQIPPKVEYSLSEYGESLSEILNKLCLWGENHVD
                     LLLTKNEDIILLKRD"
     gene            complement(16392..16703)
                     /locus_tag="U0308_001068"
     CDS             complement(16392..16703)
                     /locus_tag="U0308_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2316 family protein"
                     /protein_id="HEM2316038.1"
                     /translation="MTLSKEQIKATKSEFAENLALANLTIAEVAKELNTSEVKIERIL
                     NLKQRSLNDGWILRNYLLRKVAEVGKTPVPFTALSGDYHGYWFLDGEEIDSGILSIGN
                     H"
     gene            complement(16720..17718)
                     /locus_tag="U0308_001069"
     CDS             complement(16720..17718)
                     /locus_tag="U0308_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEM2316039.1"
                     /translation="MKIITIEEHFESEVITNEINKVTGNLVSGQVSPEMFQYMQKELP
                     SAAEMQDTEKRLAFMDQHGIDIQVLSYGNSSPQNLDPKISVALCKRANDELAKVIQQN
                     PTRFAGFAVLPVGSPEDAAIELKRAVEELGFKGALVKGQFENKYFDNRFYYPIFEMAE
                     KLDVPISFHPSFIPETITEQYFASDAWSDVVTGVFSSAGFGWHMDVGIQVVRMILSGI
                     FDKLPNLKIITGHLGEMVPMFLNRMDNTLGHWTTLERKISDYYRTNVYVTPSGLLYQN
                     EWKFLLNELDENHLIYALDYPFVKPENARTFLDTLDLTDEVKAKIAHENAEKLLHL"
     gene            17820..18377
                     /locus_tag="U0308_001070"
     CDS             17820..18377
                     /locus_tag="U0308_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2316040.1"
                     /translation="MNNYVKVHQPLNVDLRTQKTQTKLYTVLERFYVEGRTFESISIK
                     DLCEQARVSRATFYRHHEEIIQVIEVQILRTMQYFSLEFDQIILTKENIQRLILRTIQ
                     KNPLLFQAIFWSRAENIFVDVVSGEILRISLLKEVSFSDSHFIPNYFARMILSLATEI
                     QQSNKDYTNGQLVELIQEAARFLQK"
     gene            complement(18409..18897)
                     /locus_tag="U0308_001071"
     CDS             complement(18409..18897)
                     /locus_tag="U0308_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QueT transporter family protein"
                     /protein_id="HEM2316041.1"
                     /translation="MKMKILTVNAIIAALYVVLGMIVAPIGFMALQFRIPEIFNHLIV
                     FNKKYFWGIIVGVFITNLFFSGLGWIDLVFGVAQSAISLLLMIGISKYVKGIIPRMII
                     NTILFSLTMAIIAWELVIVFDLPFLITWATTAASEFIVMGVGIPLMYLLNKRLNFRKM
                     ID"
     regulatory      complement(18903..18950)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            complement(19045..19221)
                     /locus_tag="U0308_001072"
     CDS             complement(19045..19221)
                     /locus_tag="U0308_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316042.1"
                     /translation="MKINKIIEYIVVAIIVLGWTYFIVIKEILPKNIGFISLVILSII
                     LYFVGKRLNGKHSR"
     gene            complement(19341..20894)
                     /gene="cshA"
                     /locus_tag="U0308_001073"
     CDS             complement(19341..20894)
                     /gene="cshA"
                     /locus_tag="U0308_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase CshA"
                     /protein_id="HEM2316043.1"
                     /translation="MTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIG
                     QAQTGTGKTAAFGLPMIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVL
                     AVYGGSDISRQIRSLKKNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMG
                     FIDDIETILKEVPAERQTLLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQF
                     FVKVHEKEKFDVLSRLLDVQAPELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQ
                     AKRMSVLRKFKEGKIDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRA
                     GKEGMAITFVQPREMGYLRIVEETTKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITE
                     ENLADYKTFANELLEKYDATDIAAAMLKMLAKEPDKTPVHITEERPLPSRGGGGYKGK
                     NGKGGKGGGYRGGSGKGGSYRDRNNSGKGRRSGGGSGSGGGGNRDRRSGGGEQRSGGN
                     KGNYSQKSK"
     gene            complement(21356..23029)
                     /locus_tag="U0308_001074"
     CDS             complement(21356..23029)
                     /locus_tag="U0308_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HEM2316044.1"
                     /translation="MTWQQHLNAWQNADLSDEWRRELQRVEQEQERFDGYLTFGTGGM
                     RGKMGVGTKRINLFTIRRVAKGLGDYVVANGGAEMGVAIAYDSRHHSGAFAQDTAKVL
                     AAQGVKVYLSDTIRPTPALSFCVREKGAFAGVVITASHNPSIYNGFKVYDKNGCQITL
                     GVAQEIAGYLENTTDIFTIPVRELPNPLVMTLGKEMDDAYLKALTAVVSRPDLLADYG
                     NELQICYTPLHGAGKELVMRGLLENGFSETTMIAEQSEPDGDFPTVVSPNPEEENSFE
                     LAKKQAKEIQADIILATDPDADRLGVAVLNKQATYQILTGNQLGALLLQYILEAKTSV
                     TQADTMINTIVTGDLGGRIAHDFGINHIQTLTGFKFIGEKIAEMEGTEKNFLFGYEES
                     YGYLIAPFVRDKDAVQAALLTAEMALFYKKEGTTLLQKLTNLYEKFGYHKEHLHTITL
                     DDSDGTTKMNQVIDDLRKEPTCIPGITVLEDFLTSKRTNLSTMEMTNIELPKENVLKF
                     YLNDNAWFAIRPSGTEPKCKIYFQTIGQTEEIATKAMDELKKCVLAKWD"
     gene            complement(23026..24093)
                     /locus_tag="U0308_001075"
     CDS             complement(23026..24093)
                     /locus_tag="U0308_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 130 protein"
                     /protein_id="HEM2316045.1"
                     /translation="MNIYRYEENPLITPLDVKPIHEGFEVIGAFNAGVAEYNGEVLLL
                     LRVAEKPVSEDPEVVLAPVYNAKSKELELQQFRLDDENYDFEDPRMIRSKAKLEGFSY
                     LTSLSYIRIARSKDGHQFTLDEKPFLYPFNEYQTFGIEDARVTQIGDTYHVNFSAVSE
                     FGVADALVTTKDFENLEYQGNIFAPENKDVLIFPEKINGKYYALHRPSLKSIGNLDIW
                     IASSPDLRSFGDHRHLLGIRPGEYDSGRVGGGCVPIKTEEGWLILYHGATEENRYVMG
                     AALLDLNDPTIVLKRTKTPILEPVADYEKNGFFGDVVFACGAIQEGDTLHMYYGVADT
                     SMAGCDMKISEILHQLEVENK"
     gene            complement(24115..25029)
                     /locus_tag="U0308_001076"
     CDS             complement(24115..25029)
                     /locus_tag="U0308_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1861 family protein"
                     /protein_id="HEM2316046.1"
                     /translation="MNTIENLLQVYRENSAAFGTRITLNGAGDKDVYNITAPFHWLGK
                     EYIAGRVESRDSEFSEVRFFEKIETDKYQLVENTTVLALQDPFVTFVQGELIIGGVEV
                     FPKETDPTMLDWRTNLYRATSLTDFEQILAGPIGMKDLRIKELADGRILVLTRPQGEK
                     GGRGKIGAIVIDSLAELTIEKIEAAPLLKRNFSGEEWGGGNELHLLEDERIGVLGHIA
                     CFDEAGNRHYYACSFRLNEDFSQIEQEKIIAERANFAPSEPKRPDLADVVFSGGLIRN
                     SDGTATLYAGIGDSDAQKLAIPDPFKNN"
     gene            complement(25031..26563)
                     /locus_tag="U0308_001077"
     CDS             complement(25031..26563)
                     /locus_tag="U0308_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucohydrolase"
                     /protein_id="HEM2316047.1"
                     /translation="MEFWRRSVFYEIYMKSFQDSNGDGLGDFKGLTSRLDYLVDLGID
                     GIWLTPFYPSPQVDNGYDVSDYCDINPDYGDMTDFRAFMKAADARGIKVIIDLVLNHS
                     STEHAWFKESRSSKTNPKRDYYIWREKPNNWESFFGGSAWEMDELTGEYYYHSFAKEQ
                     ADLNWANEAVRAEMEQVLAFWLNEGVAGFRLDVINNLTLVLEFTDNPVTSGEMEHVYD
                     RNQSGLEQALEDIASFCRKERDVFLVGEISSDQLAEIARYSSKKMLDVTFNFNFGSVD
                     QLDAKSVFTTLNEMETALNEGQWPTLFFGSHDMSRFRSRLASGDIVKTQLLAFLMLTA
                     KGVPFIYYGEEVGMPDLTFSSVKEMRDIQGTAAYYQALQTGSDEKQALEIAIEKTRDK
                     ARGPMIFPDGKPFTLGEPWIKMATLPEKEARTMWRFYQGLLAFRKENDFKEMEYTFLK
                     LDGEVLSYQRGEFIFLLHFGEEEVTYPLQGNYQLVFGEAVMVGNGIRMGAHTGIALRV
                     EE"
     gene            complement(26579..27412)
                     /locus_tag="U0308_001078"
     CDS             complement(26579..27412)
                     /locus_tag="U0308_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM2316048.1"
                     /translation="MVGHNSKAGKIVRYILTTLLMLVMIYPFIYLVLNSFAAWDQVDK
                     KLIPTEFTTRSWDWLFGNSVVAAPAPWIHAFINTIIVSTIATGLMLLFGLMVGYALAK
                     VDFKGKKIVNNAILFQMFFPAIILLIPQFLMITDFGLLDTYAGMIIPTMLSLWAVFMY
                     TNFFKAIPDTLIEAAKLDGASDLKILFRVVLPMSKSITTVIFLFLFTDRWTNLLWDML
                     VTKSDGTVTLNVLISQMFGPYATYPGPMYAASVLLTLPLIILFLFFSKKFQEGMQFTL
                     K"
     gene            complement(27399..28277)
                     /locus_tag="U0308_001079"
     CDS             complement(27399..28277)
                     /locus_tag="U0308_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2316049.1"
                     /translation="MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSP
                     EINFVGFDNFIKAFTSPAVQAAFFVTYKFLIVFVPMALIISMIVAVLVNGLPKFKGLY
                     LVAFFLPYLSSGVVTSLIVQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMI
                     AWKMSGYYALILISGLASINHEIYEAAAMDGSGRFRTFWKVTVPMLYPALFTVIVLAV
                     SVSFGIFTEVYQLTGGGPNFATNTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIG
                     VIKKMLEKWGQRNGWT"
     gene            complement(28274..29593)
                     /locus_tag="U0308_001080"
     CDS             complement(28274..29593)
                     /locus_tag="U0308_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2316050.1"
                     /translation="MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAP
                     NPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRS
                     FAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWR
                     LDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYD
                     AASKGNAFVEDGKLVADDKAGTELLTFMSELQKNKLLLASKATDPFETGTSIMADNGP
                     WTFPNWDEKFPELKYNENYAITAPLVPDNMANEENVATYADSKGVVMYAQATDKEKEA
                     AMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAANVPYSI
                     PAMDDAKYNDIQQIIGEEAWNPIVRGEKKPAKAWSDMKKAEDGVLQE"
BASE COUNT         8694 a         6559 c         5018 g         9430 t
ORIGIN      
        1 attttttagg atggattaaa attctactac tcctagactg acttcaagtg ccttgtttac
       61 cttggccatt aaatcttcgt ccaaatgtgt aattttgtct gtcaggcgct gtttgtcaat
      121 cgttctaatt tgttctaaaa gaatgacaga atctctctca aagccatctt tacgagtagc
      181 ttccacgtgt gttggcaatt ttgctttttg aatttttgca gttattgctg ccacaatcac
      241 agttggactg aatctattac caatatcatt ttgaatgatg agaacaggcc gtattccccc
      301 ttgctcgctt ccgaccacgg gggaaaggtc cgcgtagtat acgtcaccac gcttcaccat
      361 cagccattaa cctcctaaaa tactaatatt cctgtcttcc gcttctgctt cgacatgggt
      421 acactcgcat gcgatagcga aattaattgt cgccatttct gcatagccgc gctccatctc
      481 gtctcttaat tcgcgagccc ttttctcttg taaaaactgt tgcgttgctt ccattataac
      541 ttcactccgc cccatttttt ctttttctac aactacgtcg agttcttgta tcatttcctg
      601 tgtcagttct acggatatta tcatccgctt ttctttctct aacacgtgtc acacccccaa
      661 agcctcgtac ctgtaagtaa caactatatc gtaccattat cacgccttga agaaaagagt
      721 tatttcgcat tttattgtta agaatattac agttctagct gatatactct cttaagtcct
      781 atatatagct ataaagtttc atatgttaga ttataaacgc ttcttctaaa aaaagcacga
      841 atattacctt ctaatggatg tattttctag gtatacgctc atttaacaga caagtaacct
      901 cataatttat tgtatctaaa tagtgagcgg catcatctgc tgttatcgtg tttccatggt
      961 ccgtgccaat tatcgttact tttgaaccag tttgaaattc gcgcggtagt tttatgatgg
     1021 tttgatccat acaaacgcgt cctataattg gggctagttc cccgtctact aaaacatgaa
     1081 atccgctgta atgacgaatc aacccatctg catagccaat cggtaacgtt gcaacccatt
     1141 ctcgttctgt tgcagtgtag gttgctccgt agctaacact atcacctggt gcgagttctt
     1201 tcacatgaac catttcggta tagagtgcaa gggctggttt aagctcaaat ggtaagctag
     1261 ttttgatttc ggtggaaggg gttaacccgt acatcgatat accaaagcga atcgcatcaa
     1321 acccgatttg tggctgtaat aatgaagcag ctgaattggc tgtatgaaca tacgttgggc
     1381 gattttttaa actcgttaaa atggtttgga acttagctaa ttgttgttcg aaataactag
     1441 tttcaagttg gtcggctgtc gcaaaatgcg tgtagatacc ttctagttgt agttgattgt
     1501 ctttagcaat tgtcgtttcg attcgccttg cttcgtcggt tgtacgaatc ccaagacgcc
     1561 ccataccgct atctactttt aaatgaatgc gaagtggcgc ttctaaggtt agttcctcta
     1621 gccagtcctc tctaaaaaca gtgagggaaa tgtggttttt ggccgctaaa tttgcatctt
     1681 cttttctagt tgcgccaagt acaagaataa agtcatcttg aaacccagct tctctaagag
     1741 ccaacgcctc atctaaaatg gcaacacaga aaccttttgc tccagcttct ttcgctgttc
     1801 tagcaacttc gataattccg tgaccatatg cattagcttt gactactgcc cataaatcca
     1861 cattttctgg aagtttattt tgttcatttt ttatattttc gcgaattgct gcgcggtcta
     1921 tctcaatcca tgtaggacga tgccagcctg tcaccatgat tgttcacttt cctttctaaa
     1981 tttcaattat cacttgagct gcggctgatc tagctgtgtg ggtaatgctc acaaaaacgt
     2041 tttcacctga tttgactggt aaagtaacat ggggtcgccc atcttctact tgcaaaattt
     2101 ctacatccgt aaaacttaaa tgtttgccaa aaccagttcc attcgcctta gcatatgctt
     2161 cttttgctgc aaaacgccca gctaaaaatt cgattttgcg attaccttcg tatttttcaa
     2221 attgcttaat ttctttttct gttaaaacac gttcgataaa gcgtggattc ttttccacga
     2281 cttgttttac acgttctaaa tcaatcatat ctagtccgat tcctttaatc atgttacacc
     2341 tcttccaagt aatctactaa ttccttagcg gctgtttgag ctcctgcgat gcaatcagga
     2401 atacccacac cttcgtagct cattcctgca aaataaaccc ctgggtaatc tgctttgatg
     2461 ttctttttca attgttttag tcggtcctgg tgattaacta agtattgagg cattgcggat
     2521 ttcattcggc ttacttcata aaaaagtggc gcggcgtgaa ggtccatcat ttccgcataa
     2581 tctctcaaaa cagctgaaac gattgcttca tcacttgctt gctctaacca agtttctccc
     2641 gctttcccaa caaagcctcg tagtaacatt ttattttctg gtaccatatg cggccatttt
     2701 ttctgcaccc atgtacaagc agtggtttta tatggggcgg ttctggcaac tagatagcct
     2761 gttccatctg gtaaaatcgg tacatcttgt tcattgtatg ctaatgagac agttgcgaga
     2821 gtcgtaagcg gttgtcccgc gaatggttct gtcgtttttt ctgctaataa atgaattagc
     2881 gcatcatgtg tggcagcgat aatgacgcca tctgcctcca ttttatcgcc atctacaaaa
     2941 gaaatttcgt aagagctatt ctttttcgta atgttcgttg cttgttttgc tgtatgcaaa
     3001 ttttcttttg gaagtgcggc ggcaatggct tttggtaacg catctagccc gccttctaat
     3061 gttcgaaaag caccaatagt agcttttgtc cctgtcgttt gcatgctact ttcttttaag
     3121 ccatccatca aattcccata ttttttaact gcttgttcga attgtggaaa agtggcgcgt
     3181 aaactcattt tgtatatatc tccggcataa attcctgata aaagtggttc gataattgtt
     3241 ttgactaatt ctttaccgaa tcgcgcttca aagaattcgc caagtgcttg atcttgttct
     3301 tgattatttc gttccattgt tggttcttga agtgcgcgag ctttcccaat ttcggatacg
     3361 agtgtactag ctagcaatgc ttctttatct gttggaattc ccatcactga gccttctgga
     3421 atcggatgaa gtgctttttg gtggtaaatg taggatcttc ctgtcgcgtt cgcaatcagt
     3481 ttatcttcga gtcctaaatc cttcactaag cctacaccag ctggttttct tgctaaaaag
     3541 gagtctggtc ctttttcaat taaaaatccg tcccgtttaa ccgtttcaaa tttcccgcct
     3601 agttttttgt ctttttctac taattcccac gtataattcg gatgtgtttt ttgtagttca
     3661 tacgctgctg caagccctga taagccgcct ccgataatga ctatatgttt cactacttaa
     3721 ccaatcctct ctatctactc tttcgtttat tctatctatt ttaccagatt tcagggtaat
     3781 tgaacaaaaa ataaaagaac agccatttcc aaaattacag tcgctattga tcagcgattt
     3841 ttaggaaatg acgtgttctt ttttaattta ttgttttgga cgggctgtac caattgtata
     3901 ccttgatagc taagtcttga ttgatatagc gaacataagc ttcagcgctt gtacttcctg
     3961 atttaagcca aacatttaag tgccttgatc cgcctttttc catccaaatg ctttgtctta
     4021 agcttaaacc ttgaattcgc tctttgcgga taatgtgcgt taacttggag aaaattgggc
     4081 gtgactggac aaggagtgtg tgcttatctg tgaaaactcc ggttgcgcgg tagctggtta
     4141 ccccttttat ccctgctaaa actggcaaaa taatactaat taagccgagt gggaaaaata
     4201 aaatacttgc tactgcggct gggataattg tccagatcaa gtaaatctgc aaaaatctgc
     4261 gcaaactggc ttttggagca cgttccattt tttctatttc aaataaataa tctggtagca
     4321 tttcttttaa tgtttttaaa gccaacgctt ttttcataat aggcaaaagt aaaatgtcgc
     4381 cggatagttt ttcatcacct gagttccctg cagtagtaac tttgaccgct actaagccga
     4441 gcatttgtcg tagtggtgat tcaataatgg tgattccttg aatacgcgaa agtgaaatgg
     4501 ttgtatggtt tcgttctaat agtccttttt ctacaacaag tgaattggga tatttcatca
     4561 atttgaactg gaaatacttg aacaatgtcg tcacaatcga tattccccat aataccaaaa
     4621 gaatcaagac aattaataca attagtacga taatgcccat tttccataac tcttctgctt
     4681 gagcttccat ccagtctgtc gggatgactt ctcggaattg ttgcatgaat gctagaacga
     4741 taaggagcgt cccgaaaacg ccgccggatg ttactgccat taaaataagc tgttttgttt
     4801 gtagcatgac cgttttttct ggtgcttctg ccacttctac tgtggtttcc tcggtttctg
     4861 gcacggcttc ttggatgtct ctctttttac cgtcgcgtaa atcatttaat tcgtctacta
     4921 cgccaactgg gacagcgact aaatcggctt ctgctttccc gttaccgcca gctgtttcga
     4981 ttaaaatttg gcagacatta aatgggataa agaaaaacca ttgtttcttt tggacggttt
     5041 ggatgcgctc gtaaggtatg tatgtatttt ttcgaaaaat caaaccgtat ttgatgcgaa
     5101 tcccttggtc ttcgagggtg tatttgtagg ttatgtattt taagactgcg ggggttaaaa
     5161 tgagtaatat aacgatgaca ataattaaat atacagccca gtccggcaaa taaccgttac
     5221 tattaatggc gcggaaaacg gaaaataaac cgacgacgat aggaacaata ttgcgtctta
     5281 cgttcgtaat aatttcttta atgagggcaa tcggatggag gcgtctttct tcaaacatct
     5341 tctttcgcca ccttcacaag ttcaagaata tgatgtctaa gttcatctga ttcagactcg
     5401 tttaccgctt caatcttatg tgtttttgca gcagttgtaa tcgataaaga aacgagtttt
     5461 tgtcttctaa gtagcggacc ttgctccgtt tccacgtgtt gaatgcgaat catcggaatt
     5521 aagacacgac ttctaaaaat aatgccgtgc tgaatttcca tttcgtctgg tttaatctgg
     5581 tagctccaac gtgcaaaacg aaacggaata atgaataagt aaataaaggc agcataaagt
     5641 accgttaatc caaaaccgat cgcactccac cacaccgaag ctcctgcata atacaaaatg
     5701 attgccgcta caaccgaaca aagtagaaaa gtaagaacag caattccctc cgtttgccgc
     5761 caaactgttt taattttctc cggtaatttc ttttctaaat tatcaagttc cattgctcta
     5821 ctcctttttt cttttatctt acgttaaaaa cagctaaatt ggtagcgatt ttttaaatct
     5881 atcatgtttt attcatagtt tgttcatatt tcttttttat aatataacaa gaagaggtga
     5941 gaaggatgaa gaaaaaaggt tatattctat taataatagc gcttttgtcg ctaacgttaa
     6001 actggcttcc ggagattgcc cacgcgcaaa aagaagcaac aggaactact tatacaactg
     6061 caaccacaaa cgaattaatg gatatgtttc tacctcactc catccaaaat ccttatattg
     6121 aaacgacaaa aaatagcgcg gaattaatgt ttgtaacaga ggaagccgcc acgattacca
     6181 ccgaaacaaa taatcaaacg caatcaattg ctggtagcac cgaaaaccat caatttgcat
     6241 tagctaattt gcaacctgga aataatttag tgacaatcac agcgacaatg acagatggga
     6301 ctagtgagag caaaacaatc accataaacc ttccagagaa accaaagaaa aactctaaat
     6361 cgtttcatga tcattctaaa aaccaacaag tgacgcatcg aaaaaaaggg cacttattat
     6421 aataaaaaag gaagcactca ttcataagaa gagtgcttcc tttttcgtta atttctacgt
     6481 ccaaatgtaa aaccaagtgc tactaaactt acccctgtta caaatgggat aaacgggttc
     6541 gaatccccag tatgaggtaa aacccctgtt gcttttacga caccgtctac gcttgttgtg
     6601 ctagtcactt tttgcacagg tggaatggtg attttggata agagtgtttt ttcaatcgtt
     6661 agttgtaatt tttgaccggc ttgtaaagta tccgatgtga gattgttcca gtctttaatt
     6721 tctgcaacag agacatcaaa cttattagct actccaggta atgtatcgcc atctttcact
     6781 ttatagatga ctttaatttt accattttgt tcggaatctt taacgatttc aagtggacca
     6841 aaatctgttt cgactgtttt ttcaatcagt tgcttttcag ccggaataaa tggtggttct
     6901 tctttaaccg gtggcgctgg cggggttcct gttccttgtc caccgctacc gtaatcattc
     6961 actgtcgcat ttctcgaaac agcctctagg ttatcaccgg atagcgttgc tttattcgta
     7021 tagctttttt gtttcgtcgt aattttcgta tcataagtaa tgacaacaga ttgattattt
     7081 aacgttccaa tagataattc aaaattgcga tctgcatcca gcgtaattgg ctggatattg
     7141 gtagttatca cttttttgtt ggcatcgcgg tatttgattg ttgcacttcc aagcagattt
     7201 tgccctgagc caagcgtatc cgtgtaaacg gcattatcaa taggtgtcag cgcattattt
     7261 aaagtaacag tccaatgtaa aatactcaag tctttatcat ccattcgccc ttgcttaaaa
     7321 acgattgttg gtgagcccgt accgccacca gtattaactt tgctaataaa ggcgtttatc
     7381 gtttgggtcg aatttttcac aggaaaagca attggattta cttgatctgt ttgaatattt
     7441 ttgctgttaa aagttgcgtt ataataaagg ctgccactta aatctgtatg tgtatttaca
     7501 tagtcggtaa aagttaatgt aatggttccc gttgcttgat caatggttgc atttgcgatc
     7561 gtgtttcctt gcgaatccat aagagggaat ccgccataat taattaattt tagctgatta
     7621 ggaatagtaa gcgtcattgt ttctccgctt gcaactggct gtgtaataac gaaatcatac
     7681 gccactcgca ctttactatt ttccttaaaa ttcgttgttt gctccccgtt ttgattttgt
     7741 aatgatacat tagtaaaaaa actgctgccg taatctgttg cagcttctgc ttttgggctt
     7801 aaaaatccag tgataattaa acatataatt gcaaatacta accatctttt tttcattttg
     7861 tttcattccc ccttaaaaca tctatcttta tagttcccac aacttgcttg ttaaaaaccg
     7921 tacaatgatt ttgcgcacaa aaaaacgcca gaacaagtct gacgtttttc tttttatagc
     7981 tgcaataaat attggtaact ggcttctagt gtttcgaaca tagctcgttt ggatctatct
     8041 tgctcaatgc aatagtactc gactccgttt gcttcgcccc attcaataat agcgcgaaaa
     8101 tccacttcac cttgccctat ttcgactaaa ttattatcca tatcttctag ttcaaaaccg
     8161 ctcacaaaat ctttcatatg cacaatcggc gcgcggccgc tgtagcgttt aataaattct
     8221 gtttcatcat gtccagctgc gcgaatccag taagtatcag gttcagcata aatacaaata
     8281 ccgtcaactg ggtcggtaat ataatccatc actctgcgac catgaatgca ttcattgaaa
     8341 tcgtattccg gattatgaag accaatgcga aaacctagtg gatgtagttt ttccgccgca
     8401 ttaattaacg ccgcttttgt tgccgtgtag cccgctgtcg tttggtcctc ttcttcaata
     8461 tatttgtcaa aaacagtttt acaatcaaag aaataagctt cttcaatgat gccatccaaa
     8521 tcattcataa aacgatcatg cttgatgtgc atgccgatca cttttaactc atatttttgc
     8581 agtaaacgac gtacctcgct tggatcattg ccacgcatac catcaagttg cacatatcga
     8641 aagccgattt catgcatttt ccggagcgta ccttctaaat cgcgctccat ttcttttcgt
     8701 acagaataaa gttggactgc tattttttct tttatattca ttgtttctcc gcctttcctt
     8761 atgcctttaa atccagccaa tcaacctcag acgctgttaa tttaatcccg gccgctgcaa
     8821 cggaagattg aagttccgta gcattttccg gaccgatgac agcggctgtc gggaatgatt
     8881 gcgttaatac ataagcaagc gaaatttgga ttggagtgca acctttttgg ttagctagtt
     8941 gcttggcacg actgtatctt tcccagtttg cctcactata ataaacttcg accatttccg
     9001 tatcgcgcgt gtcttcctca gaaaatctac cagagaaaaa tccgcctgct tgtgatgacc
     9061 aagaaaatag tggcaaattc gtcgcctcat gccagcgaat catctcttca ctcgccgaaa
     9121 cacaattttc ccagcgtggt cgattcactt ttgccaaact aaaattaggg ctgttaaagc
     9181 ttagtggcgt caatccatgg ctcactgcat attcattcgc ttcgataata cgcgggagct
     9241 cccagtttga aagtccgata gcataaacgc ggccatcttc cacttcttta tgcatcgcct
     9301 ccataatagg acccacttct acatctggat tgtcgcgatg aagtgcgaat aattcaacat
     9361 gatctgtttg tagcgtatct aaactaaccg aaatatcttc gtgaattgct tccggagtaa
     9421 cccgcggcac gtcgcttgct tcccgaactg gatgcccgcc tttcgtttgg ataatgacac
     9481 tatcacgatt tcctctcata ttcatccacg cgccaatcgc tttttcacta tggcgataat
     9541 ggcgcgccgt atcaaaaata tttccaccca tttcaaaata ttgatctagt actggacccg
     9601 caaaatccat attatctgca cgtaagaaat ctcctgcacc catcactaaa ttagagcaag
     9661 ctatctcgat tttttgtcca ttttttctgc cgttaacgat aattttttcc attatgcttc
     9721 caccccactc gcggcaattt tatcgactac aagtgttgta ttcgaatctt ttacgagtgt
     9781 tgcaggaatc gctactgtcg gttctttttc cactacttgt ttcacgatat caattttttt
     9841 ctcgccagtt gctactaaat atatttcttt cgccgctaaa atttgttgca taccaagaga
     9901 aattccgtgt gttaatggca aatctgtatc aaaatatttg ctcatgacgc gtttcgttac
     9961 atcatcaagt tccacgacat gacagttcac atctactggc acaaatggct cgttgaagcc
    10021 aatatgccca ttaagtccaa tccccagcaa aataaaatcc attccgccac ggtcgtcgat
    10081 aaacttgtct acacgagcgc attcatccgt taagctcgtt gctttcccat cgaaaaagca
    10141 aatttgttca ctagaaacat ttttcaaacg gtcgaaaaat gcatcataga gtgtttggat
    10201 acagctacct tttgtttcgc gtccaaggcc aacccattca tccaaaccaa caaattgcgt
    10261 ctcactaaaa tctacttcgc ccgtttgatt cgctttaata agcgcttcta ttgttagtaa
    10321 aggcgtgtcc ccaccagcga tacaaattaa acttgcaggt ttttctttta ccaattcaat
    10381 gattctttgg ctcactgttt gcgccacgag ttgttcactt tcattaataa ttaatttcat
    10441 tttaaaatca acctttctta ttagaaatcc aagtctagtg catcgtgcgc agcttggcgt
    10501 tctgatacaa cttcttcttc tttaatcaag ctcttctcat acattttgaa gaacggatag
    10561 tacatacaaa cggctgctgc gagaacgaag atgattaaaa taatcgcgcg ccaatccatc
    10621 gtcgccaaat actgcgcgag tggaatcggt gtcccgccaa cattcgcaat cggcggacga
    10681 acccaaccaa agtggaacac aaaccattgc cctactgcta aaattggcgt tccaagtacg
    10741 aatggaataa acaaatacgg attaaaacag attggcaaac cgaatacaac tggttcagaa
    10801 attgtgaaaa tcgctggaac aaccaacact tttccgaccg cttttaattc tcttgattta
    10861 ctaaatagcg caaggataac taatgcacct gtaataccag aaccagagaa gcccatgaag
    10921 taatcccaga agtttggcgc aaatacgtgc ggaattggtt ctcctgccgc atatgcagcc
    10981 gcgttcgctc ctaaatattg tgtcataaat ggaagcacaa aaccaatcaa aatcgcataa
    11041 ccatttagac cgataaacca gaatagcatt tcaaggaaac aaataaggaa aaccgcataa
    11101 ggcgtatcaa tactattaat cgccggagct agcatcgtcg taaaggcttc cggaatgatt
    11161 tgaccgctag tgacactttg cattaaaata cttagtccaa cagcactgaa tagcagtaca
    11221 actagtggaa taattgcttc aaaagtagtc gcaatccccg ccggtaaccc tttaattcga
    11281 atcgtaatat tttttctaat aaataaaccg ataagttcta cagaaatcag cgctgcaaaa
    11341 atggcgataa atagccctct tgaatccaga aattctgtat taagcacccc gtcaaccatt
    11401 ttcgtattga ggatgagcgt caccataaca gctgccatca cactatgtaa cacaggtact
    11461 ttcatttgtt ttgcgtggct ataggaaatt gttatagccg cataaatcga tagtaatcca
    11521 aacgtaaatt gaaacggtaa gttaagcgct gctgcatttt gaacaaagaa ttctttcaca
    11581 acagaacctg ctggaaacat atttccgatt gctgaaataa tcagcgaaaa tgatccaata
    11641 attaaaaccg agatcaaagc aatcatccca ttttttattg aggaaatatg acgttgtttt
    11701 tcaattctag ctgcgacagg ttcaaaatat ttctccataa aagcaataaa acggttcata
    11761 aaagattgtt tgtttttact cgacatgttg tttccctcca cttttttatt tgttcagttt
    11821 aagaataatt gcgtctttta aaatgtttgc gccattaaca gtgccgtaat ctttcgtatc
    11881 gatgacttga attggtttat tatattccgc cgcaatttca cttaaatgtt taagttgatg
    11941 tttgatttga ggaccgacta aaataacgtc aaagtcttca atatgctcgc gtaattctcc
    12001 tgctggatgc gcctcaattt tcacatctgt attcgtgagc ttttcactgt tttgggcgat
    12061 ttccttcatt tttgtaacca ttacccctgt agatgcgcct aagttacaca ctaaaagtac
    12121 atgtaattga ttgatttcca tttacttttc ctcctctttt cttaatgttt taatctcttg
    12181 atgcatttca atcatttctc gaattaaagt cgatgctaag atggtattca ttaaagtatc
    12241 ttgcgcatgt acgagtaaaa cggaaaaatt tgcttgttcc cctcttgttt cttgaatcag
    12301 catttccgtt tgtactttgt gcgcttcaat cattaggtca tctgcttctt ttaaaagttg
    12361 ttctactaat tctgaatctg attcttttgc ggcctgtaat gcttcaatta atttagaaaa
    12421 cgaatccccc gccagtgaaa ttaatgaaaa cgatattttt tctatgtcca ttatgaaacc
    12481 ctctctcatt caaagatagc cgacttaacg taatgataaa tatcacgttt tgagctagcc
    12541 attttaattt tttgcatttt ttcctcgtcc agcgctaact tcattaattg ttccacgatc
    12601 aagtgtgcct cttttgtttt taaagctaag gtgaaaatga catgaaccgg ctcctcgtat
    12661 ctatcgaaaa acatgatgcc atcctcaata atcgtcactc caatgccatc catcaaaaca
    12721 ccgtcacttg cccccgcatg tgcaatgaca acacctggcg caacgaccat atacggcccg
    12781 tatgctttta agttatgaat gattttttca tgataactcg gctcaatgac ttctaaatgc
    12841 tccaaacatt ttgttccaag cttaattgcc tgcctccatg ttgggcatgt ttcttccata
    12901 acaatcgctt cttctgtaaa ttgaaacggt ggtataagcc tttttggtgt ttcaccttca
    12961 tccgatataa gcgcttccaa taaatcgaat tctaatttac ttaaattagt aatttgcgtg
    13021 ttttcgccaa taatcgctaa aatcttactg aacttattaa taatctgttt atcacttttg
    13081 atgagtttca tccgtaaatg cttttgcagt aattccatat cctctttttg caaatagcta
    13141 tgaatccgga gtacttttgc gtcttgcata tctggtaaat ccactgtgct aatcacaaaa
    13201 tcaaaatcag ccatcatcgc gcgtttgaac tttctgaggc caattgtttg aatcgattca
    13261 aactcaaaca tacgctttaa ctgaatcgca atcatttttg aaacagcgac accttccggg
    13321 caaataatca gcaaattcgg cttcatttca actgtttgtt tattgcgttg tacctcagat
    13381 gcaaaataaa tagctaaaaa tgaaatttct tgagagctga cagaaatcgg caataacggc
    13441 ttgagtgcat ccaaactctc cttcacacgc ataaaaattt ctcgattatc gcgcataaat
    13501 tcattaaaaa tcggattctc gatagtaact ccggcgcgaa cacgcctaat cattaattta
    13561 atgtgtgctt tgatttgcgt gaaaaaatcc gtatcgccat gcacaaaatc cacttgataa
    13621 atttcaccca ttttttcgca aatacctgtt acaaatgctt caattaccgc ctcatcttca
    13681 cgcccatatt gatactgctt caaagaccca ataattgttg ctaacgcctg atcaagctca
    13741 tctttaatca taaaatctgc tgtaaactga aaatccggtt tggcttcatg ctgcttcagt
    13801 aaaatcgcaa ttagcgttaa gtaaagctgc tcatccatcg cacgtgtcat attctcctcc
    13861 accgaatgcg cctcacgatt cacctcctgc aaaatctcca gttcaaaaag attataaaaa
    13921 aataactcgc cttttttaga taagctattt tccgaatcta aaaactgata aaattcgcgg
    13981 atattaataa aacgcaagaa acttctagca aaaagcgatg ttttcgtaat taaatttcca
    14041 gtcactagaa agccatgcct aggctgatgc gataaatcta aattatttaa aaaaagttct
    14101 ccttcaatag cacgtagatg atttagcaca gaggatctgg aaataaacag gacttcttca
    14161 aaataagtaa ccgggagcac ttcttcactt aaaagcagtt ttagcagtaa aaattgctgc
    14221 acttcttctt ggctgtaacg atattttttc ggcgtaattt gttgcttaaa tttacgcaca
    14281 accggattta cgatattctt ttccggaagt agcacccctt tccttgtatg tctgataaga
    14341 gctggtaatg tttgctcatg gagaaaaata tcgatttttt ccaaactata acgaacactt
    14401 cgctccgaac aaccaagcgc gttagaaata taaccaatat ttttaaaatc ttcctgctcc
    14461 ataagaaaat ctaaaatttg aatacactgc tgatttagtt tcatcaggta tcactcctct
    14521 ttctaaattc aatttatcat tttcatgata gggcttacaa taagctatat agctattttt
    14581 gtcagatacg tagggacaaa aaaactatcc attttactat aactggaaaa aaaccttgcc
    14641 ggaataggtc ggagctactg aaagcacaaa aaaagccttc tacattcact gtaaaaggcc
    14701 tattatttga actatttatc ttttttcata tagaaagtta aaataattgc gatgaaaacc
    14761 attaaaaatc caacaatcgg ggtataaccc aaaccaatat attccgtaac taatccgcca
    14821 ataaatgcac ctactgctat cccaacatta aaagctgaaa tattaagtgc cgaagccatg
    14881 ctcaccgttt ctggcaaata ccgctctgcc aattgcacga catacaactg caaaccagac
    14941 acattcataa aggcaaaaaa tcccatcaac ataatagtca ttaatccaaa aatcgcgttg
    15001 gtcgatgtaa attgaagtaa taataacgta atcccttgca aactaaacat cacgaacagt
    15061 gccttagccg ggcgctcatt cgcaaaatgc ccaccaatcg tattcccaat cgcaaccatc
    15121 acaccataca caataagtaa aataacaatc atgcttgtag aatagcccat tccgctaaac
    15181 atcggcgaca aatacgtata aaccacaaaa gtaccaccat agccaaacgc tgtcatgagt
    15241 aacaccatca cgattttttt attaactaat aattgtccaa tcgctttaaa tgaaatactt
    15301 tttccattgg ataagttttt cggaacgagg aaaaaattag caataatcgc aatcacgcca
    15361 atcgcaacaa taaacaggaa tgacatccgc caaccaaata gttgcccgat aaacgtccca
    15421 agcggcaccc ctgtcacagt cgccaccgtc aaccctgtaa acatcaccgc aatcgcacta
    15481 gctcgtttgc tcggatgaac cacatcggca gcgataacag aagcaatcga cataaacacc
    15541 ccatgcgcaa acgccgcaac aacacgccca gtaaggagca ttccaaaact cacagcaaat
    15601 gccgagacaa gattccctat cagaaacacg agcatgacta ataataacaa atttttacga
    15661 ttcatcttcg ccgtcatagt tgttaaaacc ggcgctccaa ccatcacacc aagcgcatat
    15721 atcgatacag ttaaaccagc cgtactaatc gacacaccca tactagaaga aatcagcgga
    15781 agcagtccca cactaataaa ttctgttgaa ccaatcccaa acgcactaat cgctagcgcc
    15841 aaaagtgtca aattaggatt tacttttttc atatccacat cgttcccccc taaaaaattg
    15901 caaattgttt cgttctgtta tacagtatct tatataccgt acagaataac aagaaggtac
    15961 ttaaaagtca tatagatact aaaaagtgcc tataggagga ttacgatgac taaagtatat
    16021 aatatcggcg tcgaagctac actagaagtt ataggcggaa aatggaaacc agtcatcctt
    16081 tgccatttac gcgaaggcaa aaaacgaact ggcgaattaa aacgactcat ccccaacatc
    16141 acacaaaaaa tgctcacaca acaattgcgc gagctggaaa aatccggggt tattgtccgc
    16201 aaagtatatg aacaaatccc accaaaagtc gagtattcat tgagtgaata cggcgaatcg
    16261 ttgtcggaga ttttgaacaa actttgctta tggggcgaga atcatgtgga tcttttgctc
    16321 actaagaatg aagatattat tttgttgaaa cgagattaat agaaaaatag ccacctctcg
    16381 ggtggctatt tttaatgatt ccctatactt aatatccctg aatcaatttc ttctccatct
    16441 aaaaaccaat acccatgata atccccactg agcgctgtaa acggaactgg tgtcttccct
    16501 acttccgcta cctttctaag taagtaattc cgcaaaatcc aaccatcatt taaagaacgt
    16561 tgctttaaat tcaaaatccg ttctattttt acttcacttg tatttagttc tttcgctact
    16621 tcggcaattg ttaaattcgc aagcgccaaa ttctccgcaa actcactttt cgttgctttg
    16681 atttgttctt ttgataaagt catttttcag ttccaccttt tataaatgta ataatttttc
    16741 agcattttcg tgagcgattt ttgcttttac ttcatccgtt aaatcaagcg tatctaggaa
    16801 agtcctagca ttttctggtt ttacaaaagg ataatctagc gcataaataa gatgattttc
    16861 atctaattca tttaataaaa acttccattc attttggtat aataagccgc ttggtgtcac
    16921 atacacattc gtccggtagt aatcagaaat tttccgttca agcgttgtcc agtggccgag
    16981 tgtattgtcc attctgttta aaaacattgg caccatttca cctaaatgac ctgtgatgat
    17041 ttttaaattc ggtaatttat caaatatacc tgaaagaatc atccgcacga cttgaatgcc
    17101 aacatccata tgccaaccaa aaccagcaga tgaaaatacc cctgtcacca catcagacca
    17161 agcatcactg gcaaaatatt gttctgtaat agtttctggg ataaacgatg gatggaacga
    17221 aatcggtaca tctagtttct ccgccatttc gaaaatcgga taataaaagc gattatcaaa
    17281 atatttgttt tcaaactgcc cttttacaag tgcacctttg aaaccaagtt cttctacggc
    17341 tctttttaat tcaatagcag catcttctgg tgatcctact ggtaagacag caaaaccggc
    17401 aaatcgcgta ggattttgtt gaatcacctt cgctagttca tcattagctc gcttacacag
    17461 agctaccgaa atttttggat ctaagttttg cggagaacta tttccataag agagtacttg
    17521 gatatcaata ccatgttggt ccataaatgc taaacgtttt tctgtatctt gcatttccgc
    17581 tgctgaagga agttcctttt gcatatattg aaacatttcc ggactaacct gtccacttac
    17641 taaatttcca gtgactttgt tgatttcatt cgtaatgact tcggattcaa aatgttcttc
    17701 tattgttata attttcatgt tcattcctcc ttaagtaaac aatacccctt tttaagttgc
    17761 taaaatagcc acatttcgat acactaataa caattatgta tcataaaaag gagagtttta
    17821 tgaataacta cgtaaaagtg catcaaccgt tgaatgttga tttacgtaca caaaaaacac
    17881 aaaccaaact atatacggtt ttggagaggt tttatgtgga aggtagaaca tttgaatcaa
    17941 tatctataaa agatttatgc gaacaagcgc gagtatcacg agccactttt tatcgtcatc
    18001 atgaggagat tattcaagtg attgaagtcc agattttgcg aaccatgcag tacttctctt
    18061 tggaattcga ccaaattatt ttaacaaaag aaaatatcca acgcttaatc ctccgaacta
    18121 ttcaaaaaaa tccgctttta tttcaagcga ttttttggag ccgggcagaa aatatttttg
    18181 tcgatgtagt gtctggagaa atacttcgaa ttagtttgtt aaaagaagtt tccttttcag
    18241 atagtcactt tattcctaat tattttgcta ggatgatttt aagtttagcg acagaaattc
    18301 agcaatcgaa taaagactat acgaatggtc aattagttga attgatacag gaggcagctc
    18361 gctttttaca aaaataaaaa gagcctaagt tcccttagac tctctcattt aatcaatcat
    18421 tttacggaaa ttcaaccgtt tatttaatag atacattagc ggaatcccga cacccattac
    18481 gatgaattca cttgcggctg ttgttgccca agtaattagg aacggtaagt caaaaacaat
    18541 tactaactcc caagcgataa ttgccatcgt tagcgagaaa agaatcgtat taataatcat
    18601 ccgcggaata attcctttaa cgtatttaga aattccaatc attagtaaaa gcgagatagc
    18661 cgattgtgct acgccaaaaa ctaaatcaat ccaccctaat ccagaaaaga ataaattcgt
    18721 aataaacaca cctacgataa taccccaaaa gtatttttta ttaaagacga ttagatggtt
    18781 aaagatttct ggtattctaa attgtaatgc cataaaccca attggtgcaa caatcatacc
    18841 gagcactaca tacagtgcgg cgataattgc attcaccgtc aaaattttca ttttcattat
    18901 ttttcctcct agttttttta cgtgggatgg tatgaatgaa ccacgtgtgg caattttgcc
    18961 aacatgctat tttctcatat ttggaagtta atgtaaatga attattgcac ataaaaaacg
    19021 gctacttaga gtatagccgt ttttttatct gctatgtttc ccattcaacc ttttgcctac
    19081 aaaataaaga attattgata aaattactaa tgaaataaat cctatatttt tagggagaat
    19141 ttctttaata acaatgaagt aagtccaacc taaaacgatg attgctacta caatatattc
    19201 gataattttg tttatcttca tgacgagcgc cacactcccg tatccttaac attagtattt
    19261 ataaaaaaat agactgtaga taaagttaaa aacttcttta tctacagtct atctatatgg
    19321 taactatttg tctaataatc ttatttagat ttttgtgagt agttgccttt gttgccgccg
    19381 ctgcgttgtt ctccgccgcc actacgacga tcacgattgc caccaccgcc agaaccgctt
    19441 ccgccgccgc tacgacgacc tttgccgctg ttgttacgat cgcggtagct tccgcctttg
    19501 ccgcttccgc cgcgatagcc gccacctttg ccgcctttac catttttacc tttgtagcca
    19561 ccgccaccac gggatggtaa tggacgctct tcagtaatat ggacaggagt tttgtctggc
    19621 tctttcgcta acattttaag cattgctgct gcgatgtcag ttgcatcgta tttttcaaga
    19681 agttcgttag caaacgtttt gtagtcagct aagttttctt ctgtgattgc ttcttgaatt
    19741 ttttcagttg ctacgcgtaa ttggcctgca aatgcttcgt cccaagtagg agcttgaagt
    19801 ggttgcatac gttttttcgt agtttcttcc acaatacgta aataacccat ttcacgaggt
    19861 tgtacgaaag taatcgccat accttcttta ccagcacgac cagtacgacc gatacggtga
    19921 acatagcttt ctggatcttg tggaatatca tagttatata catgtgttac gccggaaata
    19981 tcaagtccac gagctgctac gtctgttgca actagaacat caatttttcc ttctttaaat
    20041 ttgcgtagta cactcatacg ttttgcttgc gtcaagtcac cgtggatacc ttcagccacg
    20101 taaccacgca tatcaagcgc gcgagatagt tcgtctacac gacgtttcgt acgaccgaaa
    20161 acaatagcta gttccggtgc ttgaacgtct aataaacgag ataatacgtc aaatttttct
    20221 ttttcatgca cttttacgaa gaattgttca attaatagtg cagtcatttc tttcgcttta
    20281 atgcgaataa gttctgggct atgcatgaaa cgttcaccga tacggcgaat tggatcaggc
    20341 attgttgcag aaaatagtaa agtttgacgt tctgctggta cttcttttag aatagtttcg
    20401 atatcatcaa tgaagcccat gtttagcatt tcgtctgctt catctagtac aagtgtttcc
    20461 acgtggtcta gtttcagtgt gcgacggtta atatgatcca aaatacgtcc tggcgtacca
    20521 actacgattt gtgggttttt cttaagtgaa cggatttgac ggctgatatc gctaccaccg
    20581 taaaccgcta gcacacgtac atgtttgtca tagctaagtt tataaagctc ttcagaaact
    20641 tggattgcaa gttcacgtgt tggagcaata attaaagctt gtacgttgtt actcttttgg
    20701 tcaattttgt gaatcattgg aagaccaaaa gcggctgttt taccagtacc tgtttgtgct
    20761 tgcccgatta agtctttacc tgctagtcct agtggaattg tcttttcttg gattggtgtt
    20821 gcttcttcaa accccatccg atttactgat tttacaattt tttcgtccag tccgaactcc
    20881 gaaaattttg tcaatgtcat ttctccttta cctgtttaaa gtttggtagg agagctactt
    20941 ttataattca tcacaatacg cttattacga ttgtttgtct gttcatttgc agttgttttt
    21001 atgaaaactg ctatctttca ttttcatttt tctgcaatag aaaagcctgg gcgcaccaag
    21061 caaaatgatt cacggcatca gaaaatttct ctgccattat agcagttcta acgcatcaaa
    21121 taaaaaagcc ctcattaatc actaggctaa atataaacct aataaacttc catctatcat
    21181 cataacacac taacgatttc ttttcaacgt caaaagctta tctttccttg ctattatcga
    21241 ataaaaaaac ttaattcttt ttaaatgtac gcttatccgg gtttttcagc gatttttata
    21301 gataaatctt taaaaaaaag ctgaaaatcg tccgaaaaca atttccagct ttttattaat
    21361 cccatttggc taaaacgcat tttttcaact catccatagc ttttgtcgct atttcttctg
    21421 tttgaccgat tgtttggaaa tagattttgc atttcggttc cgttccagaa ggacgtattg
    21481 caaaccaggc gttatcgttt aagtaaaatt ttaaaacatt ttcttttggt agctctatgt
    21541 ttgtcatttc catcgttgaa agattggttc gcttactcgt tagaaagtct tctaaaaccg
    21601 ttatgccggg aatacaagtt ggctctttgc gcaaatcgtc tatcacttga ttcattttag
    21661 ttgttccatc gctatcatct agcgtaatcg tgtgcaagtg ttctttatga tagccgaact
    21721 tttcatataa atttgttagt ttttgaagaa gtgttgttcc ttctttttta tagaaaaggg
    21781 ccatttctgc tgtaagtaat gctgcctgaa cggcgtcctt gtcccgaaca aatggcgcga
    21841 ttaaataacc gtaactttcc tcgtatccaa aaagaaagtt tttttccgtg ccttccattt
    21901 cggctatttt ttcaccgata aatttgaaac ccgtgagcgt ctggatatga ttaattccaa
    21961 agtcatgcgc gattcttcca cctaagtccc cagtaacaat tgtattaatc atcgtatccg
    22021 cctgagttac cgacgttttg gcttctaaaa tatactgtaa aagcaatgcg cctagctgat
    22081 tccctgttaa aatttgatac gtagcttgct tgtttaaaac agctaccccc agcctatcag
    22141 catccggatc tgtcgccaaa ataatatcgg cttgtatttc tttcgcctgc tttttggcta
    22201 gttcaaaact gttttcttct tctggattag gcgaaaccac tgtcggaaaa tccccgtcag
    22261 gctcactttg ctcagcaatc atggtcgttt ccgaaaatcc attttccaaa agcccacgca
    22321 taacaagttc ttttccagct ccatgaagcg gtgtgtagca aatctgtagt tcattaccgt
    22381 agtcagcaag caaatcaggg cgagaaacga ctgctgttaa agcttttaaa taagcatcgt
    22441 ccatttcttt tcctagcgtc ataacgagtg gattgggtaa ttcgcgcact ggtatggtaa
    22501 agatatccgt tgtgttttct aaatagccag caatttcctg cgctacaccc aatgtgattt
    22561 gacagccatt tttatcatat actttgaaac cattatagat agaaggattg tggcttgctg
    22621 taatcacaac gcccgcaaat gccccctttt ctcgaacgca aaaagatagc gctggtgttg
    22681 ggcgaatcgt atcggataaa taaactttga ctccctgcgc cgccaggacc tttgccgtat
    22741 cctgcgcaaa agcacccgaa tgatgtctcg agtcatacgc aatcgcaaca cccatttcgg
    22801 ctcctccatt cgcgacaaca taatctccca aacctttcgc tactcgtcta atggtaaaaa
    22861 gattgatgcg cttcgttcca acgcccattt taccgcgcat cccgccagtc ccaaaggtta
    22921 aataaccatc aaatcgttcc tgctcctgtt ccactcgttg taattcacgg cgccactcat
    22981 ctgataaatc ggcattttgc caagcgttca aatgttgttg ccaagtcatt tgttttccac
    23041 ttctaactga tgtagaattt cgctgatttt catgtcacag cccgccatag aagtatccgc
    23101 cacgccgtaa tacatatgca gcgtatcacc ttcttgaatg gccccacatg cgaaaacaac
    23161 atcaccgaaa aagccatttt tctcataatc ggcaactggc tctaaaatag gcgttttcgt
    23221 tcttttcagt acaatcgttg ggtcgtttaa atcaagaagc gccgcgccca tcacgtaacg
    23281 attctcttca gttgctccgt gatataaaat taaccaacct tcttctgttt taatcggcac
    23341 acatccgccg ccaactcggc cactatcata ttcaccagga cgaattccaa gcaaatgacg
    23401 atgatcgcca aaactgcgca aatctggaga agaagcaatc caaatatcta aattaccaat
    23461 acttttcaaa cttggacgat gtaaggcata atattttccg ttaatttttt ctgggaaaat
    23521 tagtacatct ttattttcag gagcaaagat atttccttga tactccaaat tttcaaagtc
    23581 ttttgtggtc actaatgcat ccgctacgcc aaactcagat accgcactaa aattcacgtg
    23641 atatgtatcc ccgatttgcg tcacacgagc atcttcaatc ccaaatgtct gatactcatt
    23701 aaacggatat aaaaacggtt tttcatctaa ggtaaactga tgaccatctt tactacgagc
    23761 aattcgaata tatgaaagag aagttaaata agaaaatcct tctagttttg ctttactgcg
    23821 aatcattcgc ggatcttcaa aatcataatt ttcatcatct aatcggaatt gttgtaattc
    23881 taattcttta cttttcgcat tataaactgg cgcaaggact acttctggat cctcactgac
    23941 tggtttttct gccacacgaa gaagtaaaag tacttcgccg ttatattcgg caacaccagc
    24001 gttaaaagcg ccaatcactt caaaaccttc atggattggt tttacgtcca aaggtgtaat
    24061 taatgggttt tcttcataac gataaatgtt catttctact caaaactcct actattagtt
    24121 atttttaaat ggatcaggaa ttgctaattt ttgtgcatca gaatcgccaa tccctgcata
    24181 aagtgtcgca gtaccgtccg aatttctgat taacccaccg ctaaatacaa catccgctaa
    24241 atcaggtctt ttcggctcac taggggcaaa attagcacgt tcggcaatta ttttttcttg
    24301 ctcaatttgc gaaaaatctt cattcaatcg aaaagaacat gcgtaataat gacgattgcc
    24361 cgcttcatca aaacaagcaa tatgaccaag cacgccaatt ctctcatctt ctaacaaatg
    24421 aagctcattt ccgccacccc attcctctcc tgaaaaattc cgtttcaaaa gtggtgcagc
    24481 ttctattttc tctattgtta attctgccag tgagtcaatg acgattgcgc cgattttccc
    24541 gcgaccgccc ttttcgcctt gaggtcttgt taatactaaa atacgtccat cagccaattc
    24601 tttgatacgt aaatctttca taccaattgg cccggcaaga atttgttcaa aatcagtaag
    24661 cgaggttgcc cgatataaat tagtacgcca atctaacata gtcgggtccg tttctttcgg
    24721 aaaaacttct accccgccaa taatcagctc accctgaaca aatgtaacaa atggatcttg
    24781 tagcgctaaa acagtcgtat tttcaaccaa ttgatatttg tccgtctcta ttttttcaaa
    24841 aaagcgtact tccgaaaact cgctatcacg cgactccact cgacctgcaa tatattcttt
    24901 cccaagccaa tgaaatggtg ccgtaatatt gtatacatct ttgtcgccag caccatttaa
    24961 cgtgatacgt gtcccaaacg cagcactatt ttcccggtaa acttgcaaca aattttcgat
    25021 tgtattcatt ctattcctcc actctaagcg caattccagt atgcgcgccc attctaatgc
    25081 catttcctac catcactgct tctccaaaaa caagctgata gttcccctga agcggataag
    25141 ttacctcttc ctcaccaaaa tgaagtaaaa agataaattc acctcgctga taactgagta
    25201 cttctccatc caacttcaaa aaagtatatt ccatctcttt aaaatcattt tctttacgaa
    25261 atgcgagtaa tccttgataa aatcgccaca tcgttcgtgc ttctttttcc ggcaaagtcg
    25321 ccattttaat ccatggttca cctagagtaa atggctttcc atctgggaaa atcatcggcc
    25381 cacgtgcttt gtcacgcgtt ttttcaatag cgatttcgag tgcttgtttt tcatctgaac
    25441 cagtttgtaa agcttgatag tacgcggctg tcccttgaat atcgcgcatc tcttttacgg
    25501 aagaaaacgt taaatcaggc atacccacct cttctccgta gtatataaac ggcacgcctt
    25561 tcgcagttaa cattaaaaat gcgagcaact gggtctttac tatgtctcca gatgcgaggc
    25621 gacttctgaa cctgctcata tcatgacttc caaagaaaag cgtcggccac tgcccttcat
    25681 ttaatgccgt ttccatctca ttcaatgtcg taaatacaga ttttgcatct agctgatcaa
    25741 cactgccaaa attaaaatta aatgtgacat ctagcatttt tttcgagcta tatctagcaa
    25801 tttcagctaa ttggtccgag ctaatttcgc ctactaaaaa cacgtcgcgc tcttttcgac
    25861 aaaaggaagc gatatcctct aacgcttgtt ctaagccact ctgattacgg tcatacacat
    25921 gctccatttc accagatgtg actggattat ccgtaaattc aagtacgagc gttaaattat
    25981 tgataacatc taacctgaat cccgccactc cctcattcaa ccaaaacgct aaaacttgct
    26041 ccatttctgc gcgaacagct tcattcgccc agtttaagtc agcctgttct tttgcaaaac
    26101 tatgatagta atactcgcca gtaagttcat ccatttccca agcagaacca ccaaaaaacg
    26161 attcccaatt atttggtttt tctcgccaaa tataataatc tcgtttagga ttcgtcttac
    26221 tactacgcga ctccttaaac caagcatgct ctgttgacga atgatttaat actaagtcga
    26281 taataacttt tattcctcga gcatctgccg ctttcataaa cgctcgaaaa tcagtcatat
    26341 cgccgtaatc cgggttaata tcgcagtaat cagacacatc ataaccatta tccacttgcg
    26401 gtgaaggata aaatggagtc aaccaaatac catcaatccc caaatccact agataatcta
    26461 atctgctcgt taaaccttta aaatcaccta aaccatcgcc attactatct tgaaatgatt
    26521 tcatataaat ttcataaaac acactacgac gccaaaattc caagttcagt cgctcctttt
    26581 atttcaaagt aaattgcatt ccttcttgga atttcttcga gaagaataag aacaagataa
    26641 taagtggaag tgttagtaac acagatgccg catacattgg cccaggatag gttgcatatg
    26701 gtccaaacat ttgcgagatt agcacattca atgtgaccgt tccatcactc ttcgttacaa
    26761 gcatatccca aagtaaattc gtccatctgt ctgtgaaaag gaataagaaa ataacggtcg
    26821 taattgattt agacattggc agcacaaccc gaaacaaaat cttcaaatca ctcgccccgt
    26881 ccagtttggc agcttcaatt aatgtatctg gaatcgcttt gaaaaagttg gtatacataa
    26941 atacagccca taagctaagc atagtcggga taatcattcc cgcataggta tccaataaac
    27001 caaagtccgt aatcattaaa aactgcggaa tcagcaagat gattgccgga aaaaacattt
    27061 gaaataaaat cgcattatta acaattttct tgcccttaaa atccactttt gctagtgcgt
    27121 agcctaccat taggccgaaa agcaacatca agcctgtcgc aatggtggaa acaataattg
    27181 tattaataaa cgcatgaatc cacggcgccg gtgccgcaac aactgaatta ccaaataacc
    27241 aatcccacga acgagtagtg aattctgtag gaatcaactt tttatctacc tgatcccaag
    27301 cagcaaatga gtttaatact aaataaataa aaggataaat catgactagc ataagtaatg
    27361 ttgtcagtat atagcgaaca attttacccg ctttactatt atgtccaacc atttctttga
    27421 ccccatttct caagcatttt cttaataaca ccaatcgatg caaatgttac agtagcagcc
    27481 attagagaaa tcgctgaagc ataaccagaa ttcaagttaa cgaatgcttg gttaaaaatt
    27541 tccatttgcc atgtatttgt tgcaaagttc ggtccaccac cagtcaattg gtaaacttcg
    27601 gtgaaaatcc caaaactaac gcttaccgct aaaacaatta cggtaaataa agctggatat
    27661 agcatcggaa cagtgacttt ccaaaatgtt ctaaatctac cagaaccatc cattgctgca
    27721 gcttcataaa tttcatgatt aatgctagca agtccagaaa ttaaaatgag cgcatagtaa
    27781 ccagacattt tccaagctat cattagtgaa ataataacga gcgccgacat tggtgtcccg
    27841 agccaatcga tatcccaacc aaaatgcccg cgtaaaaaca cattcagcgc actattgtat
    27901 gaaagtaacc cttgcacaat aagcgaagtt acaacgcctg aagacaaata cggtaggaaa
    27961 aacgcaacca gataaagtcc tttaaatttc ggcaagccgt tcactaatac cgcgacaatc
    28021 atcgaaataa ttaacgccat aggaacaaaa acaatcaaaa atttataagt aacaaaaaag
    28081 gctgcttgaa ctgctggact agtaaacgct ttaataaaat tatcaaagcc aacaaaatta
    28141 atttccggac tcatcatgtt ccaatcagtt acagataacc aaatcgacca aacaagcggt
    28201 actaagaaaa atatcgcagt gaatatgaga tacgggctgg taaatgacca gcccaatttg
    28261 ttatttcgcc gcttcattct tgaagcaccc cgtcctccgc tttcttcata tctgaccaag
    28321 ctttagcagg ttttttctcc ccgcgtacaa tcggattcca cgcttcttca ccaatgattt
    28381 gttgaatatc attatatttt gcgtcatcca tcgcagggat actatatggt acattagctg
    28441 cataaacttc gagttctgga ttttctttaa agaatgctgt gaaagtttcg ttttctgttg
    28501 catcatcacg cgcaggaatt aagttagttg tttctaagaa tttcaagtca tttttgtcat
    28561 cgttataaac aaatttcaag aaatccattg ctgcttcttt ttctttatct gtcgcttgtg
    28621 catacattac aacgcctttc gaatcagcgt atgtagcaac attttcttca ttcgccatgt
    28681 tatctggtac tagtggcgct gtgattgcat agttttcgtt atatttaagt tccgggaatt
    28741 tttcatccca gttagggaaa gtccacgggc cattatctgc catgatgctt gttccagttt
    28801 caaatggatc tgttgcttta cttgcaagaa gtaatttgtt tttttgcaat tcggacataa
    28861 atgttaataa ctctgttcca gctttatcgt ctgctactaa tttgccatct tctacaaatg
    28921 catttccttt agaagctgca tcataaagtg ggaagaaatc aaaccagcgc atccaagcag
    28981 ttggatcaga taaatcacct tttgcccaaa gaactttgtc tggatatttc gcttttaatt
    29041 ttttaccaac ttcaagcgct tcactatatg tttttggcgg tgcatcatag ccaagttctt
    29101 tcagtgtatc taaacgccaa gcaaaaagaa ttggattgga gtaaactggt agcacatatt
    29161 ggtttccgtc agagaatttc caagaatcca ttgtttcgct catgtttcgt tctttgacaa
    29221 catcatcaag tccttttaca tcgttcaaag ggacaatcgc tttactgtca gctaattgtg
    29281 cagcgaaact acgattgata ttttcagaca tggttggtgc cgttttagag gcaatagctg
    29341 attggatagt tgcttccgaa gatgggcttt ctttcatttg ggaaacttca atcgttacat
    29401 ctggattttc tttttcataa gcttttgcca tttcatccca atattttact tgcgttggat
    29461 ttggagctgc ccaaaacgtt acttttgttt taccattatc gtcacttttg ctgtttccac
    29521 caccacaagc agtaagtaat gacccagcaa ccacaacact aagagctgca atagcaattt
    29581 ttctaatctt catatcaata atcctcctaa ttccactttt tgtaattgta agcgcttgat
    29641 tacgattaca ttatcacatt acatttttgt aatgtcaata attactttta taaaacctaa
    29701 t
//
LOCUS       DASDYK010000024        29544 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.024, whole genome shotgun sequence.
ACCESSION   DASDYK010000024 DASDYK010000000
VERSION     DASDYK010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 29544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29544
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.024"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            31..750
                     /gene="budA"
                     /locus_tag="U0308_001081"
     CDS             31..750
                     /gene="budA"
                     /locus_tag="U0308_001081"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HEM2316051.1"
                     /translation="MDTVRKNRLFQHSTMAALVGGLFSGTTSFKELLQHGDLGIGTLD
                     QFDGELIILDGEAFQIRSDGQAYKVKPEDTTPYASTTFFDADTSFSVSEPTSKQAVEE
                     KIAELVQGPNVFYAVKMTGNFRYVDTRVVPKQQRPYPPLIEAVKEQPTYHFEYITGTI
                     VGFWTPAYISGIGVSGYHVHFIDDMRKIGGHVFDYEMLEGTVEVAQQTEFELQLPQTT
                     EFLRSDLSTPDMLEQIEAAEN"
     gene            complement(787..2088)
                     /locus_tag="U0308_001082"
     CDS             complement(787..2088)
                     /locus_tag="U0308_001082"
                     /EC_number="2.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-nucleoside phosphorylase"
                     /protein_id="HEM2316052.1"
                     /translation="MRMVDIISKKRDGKALSTEEIQFFIDGYTNGEIPDYQASALAMA
                     IFFQDMNDQERADLTMAMVGSGDTIDLSAIEGIKVDKHSTGGVGDTTTLVLAPLVAAV
                     GVPVAKMSGRGLGHTGGTIDKLESIEGFHIELDKKDFIDLVNRDKVAVIGQSGNLTPA
                     DKKMYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTDEDAENLA
                     HAMVRIGNNVGRNTMAVISDMSQPLGEAIGNALEVKEAIDTLKGQGPEDLTELVLVLG
                     SQMVVLAKQAETLDEARAKLIEVIENGAALEKFKTFLSNQGGDASIVDHPEKLPQAKY
                     QIEVPAKSSGFVSQIVADEIGIAAMILGAGRATKEDEINLAVGLMLRKKVGDAVKEGE
                     SLVTIFADQEDVENVKAKIYENIQISDHATAPTLVHKVITE"
     gene            complement(2219..3229)
                     /locus_tag="U0308_001083"
     CDS             complement(2219..3229)
                     /locus_tag="U0308_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEM2316053.1"
                     /translation="MAATIREIAEKTGVSITTISQILNGKGERFSDLTREKVLKTAKE
                     MSYKPNFFAKNMIVSHTNTIGMIVPEVTDPFFSQMVKGAEDYLNKEGYMIMLCNSSND
                     KEREDLYVEELLHRAVDGLIIASPNILLSGVIKRMEEKRSPYILLDRQRNPRQEGNIA
                     IDDFKGGYMATEHLIKLGHTRIGIIISDTSFYNVHERYEGYLACMKDYKLTVKDTWIV
                     SGDQTMNGGYVATQKLLQENLSAIFATNDLMAMGTYRAALEKNLHIPTDLSVIGFDDI
                     ELSEYMTPPLTTIRQPIYGIGEIAAELLLKNLQNPTEKLENRLLDISLINRSSTKSID
                     NQ"
     gene            complement(3309..3980)
                     /gene="deoC"
                     /locus_tag="U0308_001084"
     CDS             complement(3309..3980)
                     /gene="deoC"
                     /locus_tag="U0308_001084"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HEM2316054.1"
                     /translation="MTIAKMIDHTALKPDTTKEQILTLTKEAREYGFASVCVNPTWVK
                     LSAEQLAGAESVVCTVIGFPLGANTPEVKAFEVKDAIQNGAKEVDMVINIGALKDKDD
                     ELVERDIRAVVDAAKGKALVKVIIETCLLTDEEKVRACEIAVKAGTDFVKTSTGFSTG
                     GATAEDIALMRKTVGPNIGVKASGGVRTKEDVEKMIEAGATRIGASAGVAIVSGEKPA
                     KPDNY"
     gene            complement(4043..4990)
                     /locus_tag="U0308_001085"
     CDS             complement(4043..4990)
                     /locus_tag="U0308_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HEM2316055.1"
                     /translation="MDKQKEQLSVEVARLYYQADLGQQEIATRLGVSRPTVSRLLQNA
                     KTKGYVKIEVQDPFSNLTELAVALKEKYQLKNVTVAFSQTNDYSEITKQISQSAAEYL
                     EEIIHDGDILGVSWGTTMYKIAQKLAPLKAEIKVVQLKGGVSHSDVNTYAAETLALFG
                     AAYDTAPVSLPLPVVLDNPLAKQMVEADRHIKNIIELGKKANISIFTVGTVRDEALLF
                     RLGYFSDQEKARLKEKAVGDICSRFFTIGGEIADEKMDERTIGIDLQDLKQKETAILV
                     AGGERKIKAIHGALRGGYANHFITDQFTAKQLLEQNFIN"
     gene            complement(5088..5504)
                     /locus_tag="U0308_001086"
     CDS             complement(5088..5504)
                     /locus_tag="U0308_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2316056.1"
                     /translation="MKAIFVCTHGNAAKELIQSAEMICGKQENTSFVPFEVNESAENL
                     QAKIASEVAKLDLTEGILFLTDLKGGTPFNVLVRLLRNFDAVELVAGVNIPLLLEAFI
                     SRETLSLKELANQVAETGRLGIYEYAAPLEEIEEDF"
     gene            complement(5521..6516)
                     /locus_tag="U0308_001087"
     CDS             complement(5521..6516)
                     /locus_tag="U0308_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEM2316057.1"
                     /translation="MLKFDEQKVRENMEGALKLRPQINEVVDQIHDRGFSNICWLGIG
                     GTYASAMQAVVHMKEKTALETFYENAAVFLTTGNKRVTKDTLVVISSVTGSTQEVVDA
                     VKKCNEIGATVFGFIDKAEAELATLVDHLISYPLNEQLKFFMVADRFMYLAGEFEDYD
                     AFYQEMDQHFAEGIVEVEKAADKFGQEFALKHHQDDIHYFVGAGNQWGATYSYAMCYW
                     EEQHWIKTKSIESHEFFHGMFEIVERDTPVTIYVTEDSQRSLSERVVNFIPQICANYT
                     VIDAKDYDMPGISAKFRGALSPFIIHAVNNRIDVHVEKINCHPMEIRRYYRQLDY"
     gene            complement(6539..7603)
                     /locus_tag="U0308_001088"
     CDS             complement(6539..7603)
                     /locus_tag="U0308_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEM2316058.1"
                     /translation="MKNMDYYIRSEQSVYENIIRSRKDLLQKVIQMEKVDYQAIVIFA
                     TGSSSNAAFAAQLYMSDKLAIPVYVEEPSTAGNYMLHLNKNTLYIAISQGGHSYSTIH
                     LVKEIERQGGIVFTLTSDLTSPIAKESTRAIDLGMGIEEMPYVTLGYSATILMLNLMA
                     LELALLQEKMLEEEYQAEIAELKKITANLPKVVEKSAAWVDAHTQELMEAERVFFIGY
                     GAAYGVAREGETKVTETIRITAFGKELEEYMHGPYIGLSEQDYIIFLEPQGLLEDRAE
                     KLKQFLQGHVKKIRTFYADAGGEKTDDLLLGVRAAELLTPLFMTIPVHLLSFEISKKK
                     GINLEVSAFPEFDQITKSKI"
     gene            complement(7616..8437)
                     /locus_tag="U0308_001089"
     CDS             complement(7616..8437)
                     /locus_tag="U0308_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HEM2316059.1"
                     /translation="MKMKSSDVLTKKDLMKVFWRSFTMEWSWNYERQSNLGYGFSMLP
                     ALNKIFKNDKDKRISSYQRHLEFYNVTPWLSTFPLGISIAMEEQSAKDKDFDTDSINN
                     IKVALMGPLSGIGDSFFWGTLRVIATGIGTSLALQGNMLGPILFLLIFNIPAILTRYY
                     GLFIGYNIGANFIEKIQKTGLMDKLSYGASVIGLAVVGAMVATMVNINMPMKFGSGDD
                     AVTIQSVFDGIVPGILALGFTFFIFWLDKKGLKAHWILLLIAGIGILGAFTGLLK"
     gene            complement(8418..9236)
                     /locus_tag="U0308_001090"
     CDS             complement(8418..9236)
                     /locus_tag="U0308_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2316060.1"
                     /translation="MEQFGTAILLALAAMLANGEYLFGSSMLSRPLVTCTLAGLIMGD
                     VQMGIIMGATLELAFVGSFSIGASIPPEIISGSILGTAFAISTGESTAVALALGIPIA
                     SLVLVVKNLCFIFVLPYFVHKADKYALEGNSRGISRMQLLGGFLSINLPIGIIVATSY
                     LVGSPVIQNVLDAIPAFVITGLGIATGLLPAYGFALLLKLMVNKKNAVFFVFGFALAV
                     YLKVPVTGVAIFAACLALILTGYATLKNDNGPKNSNTEPALANDGGINYEDEEF"
     gene            complement(9259..9726)
                     /locus_tag="U0308_001091"
     CDS             complement(9259..9726)
                     /locus_tag="U0308_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2316061.1"
                     /translation="MIQFLRVDHRLLHGQVAVSWFNALDVNTILVANDGVAADDFRKS
                     AIRLAKPEAAKLVMKSIDESIEAINSGVTDKYNMLIVVESVEDAYKLIHGTNGKIPML
                     NLGGTKQREGTANFSKAINLTPEEVAKLKELQKENVDVFMQQVPNEKKVTFEA"
     gene            complement(9746..10447)
                     /locus_tag="U0308_001092"
     CDS             complement(9746..10447)
                     /locus_tag="U0308_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2316062.1"
                     /translation="MGAKKPLFEVIASEIKDSINRDEYKPGMLMPNETALQEIFSSSR
                     TTIRRAVDLLVEEGLVVRKNGVGLYVQPKLTAQNILEMTGVMKTDTNENLKKDIKDFY
                     IRKAGKFYAEKFGIKENELVYSIKFVQKSEHGVTLDRLILPLSLYPDLQAKDFQIINI
                     IELVNSGKYKLFELEQELQLILAGNEQIKNMHIDENDPVFKLSSVFYAENEMPIAIQY
                     HYEDAESTKYVVDFN"
     gene            complement(10449..11180)
                     /locus_tag="U0308_001093"
     CDS             complement(10449..11180)
                     /locus_tag="U0308_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2316063.1"
                     /translation="MEYKDLSPAVQSEEQLRQLIQEKVAAGETSFPSERALENELGVS
                     RTTLRRSLDTLEKEAVIQKRNRKGIEINQKQTINILQMNSMSSQLPGEQKVEVMSQEI
                     VAGKDEVNHFLNLSEDKPVFKLVRRRIVDNKPFSYEISFIDSTRFAGIEKIDLNNSSL
                     YNVLEKQFAIKPTYGREELRFVSANEKLAEALKVPLNTPLFEVVSKAFDQNDEPFEYS
                     KQYLIGNQIKYKINAKNIFDYLEDE"
     gene            complement(11353..12348)
                     /locus_tag="U0308_001094"
     CDS             complement(11353..12348)
                     /locus_tag="U0308_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2316064.1"
                     /translation="MEYVKFGNTGMDVSKICLGTMGFGDKDKWIHKWVLNEANSRPII
                     KKALDLGINFFDTANIYSYGESEKIVGRALKDYANRDDVVLATKVQQTMRPDRPNSGG
                     LSRKTILSEIDHSLKRLETDYVDLYIIHRFDENTPIEETMEALHDVVKSGKARYIGAS
                     AMYAWQFQKAQRVAERNGWTKFVSMQNHYNMIYREEEREMIPFCRDEKIAITPYSPLA
                     SGRLTRDLNETTNRSETDPVQKSKYDDMMNADRGIIERVAELAETHQVSRDKIALAWL
                     LNKDEITSPIIGAQKESHLESAVEALNIQLTAAEVNYLEELYIPHPVVGALPTTK"
     gene            complement(12465..14162)
                     /gene="alsS"
                     /locus_tag="U0308_001095"
     CDS             complement(12465..14162)
                     /gene="alsS"
                     /locus_tag="U0308_001095"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase AlsS"
                     /protein_id="HEM2316065.1"
                     /translation="MAKLEKDQEKVITQGKSGADLVVDSLINQGVTHVFGIPGAKIDK
                     VFDVMEERGPELIVSRHEQNAAFMAAAIGRLTGKPGVVLVTSGPGASNLATGLVTATA
                     EGDPVVAIAGNVTRQDRLKKTHQSMDNAALFRPITKYSEEVVHAESIPEAITNAFRSA
                     AEPNQGAAFVSLPQDIVNEPNVPVKAIRPLAKPENGPASKEQVAKLVARLKKAKLPVL
                     LLGMRASSPEVTGAIRRLLQKTSIPVVETFQAAGVISRDLEDNFFGRVGLFRNQPGDI
                     LLNKADLVITVGYDPIEYDPKAWNASGDRTIVHLDDIRADIDHYYQPVTELVGNIALT
                     LDRVNAKFSGLELAEKELETLKELHAQLEERDVPPESDETNRVHPLSVIQTLRSAIDD
                     NVTVTVDVGSHYIWMARHFRSYEPRRLLFSNGMQTLGVALPWGIAATLVHPGEKVVSI
                     SGDGGFLFSAMELETAVRLRAPLVHLVWNDGSYDMVAFQQKMKYGKEAAVRFGDVDIV
                     KFAESFGAKGLRVTKPSELSDVLKEALETEGPVVVDIPIDYRDNIKLGETLLPDQFY"
     gene            complement(14357..15814)
                     /locus_tag="U0308_001096"
     CDS             complement(14357..15814)
                     /locus_tag="U0308_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEM2316066.1"
                     /translation="MKKKWGVIIASLCLLLGLSACGSDEKADANEVPTLKWYMIGTPQ
                     KDTEEVMKEVNKYTEEKIGVKVEMTQIDWGDYGKRMQTVINSGENFDIAYSAAGEFVS
                     YSQKGAFLPLNKYLDKEGKNMKAELNDVLWEGATIDGNIYGVPSNKEVGEQQVYVFNK
                     NLVDKYKMDVTKVKNFSDLEPMLKTIKENEPSITPIGGNKDFKPAFPYDYLIDNAVPL
                     PFAVNQYEDTGKIVNFYEQPETLDILKSLHSFYQKGYVTKDIATSTDPWSYDKENWFV
                     RIEKYQPYAENIWDKNTGGKYKVVTQPIAETPIIKNNSVTGAIQAVSVTSQHPEEAVK
                     FLDLLNTDEYLRNLVDKGIEGTHYKELDDGKIQDLPARVERYSMPTYALGNHFILKLY
                     EDEPADKWDQFKEFNRKSVASPGLGFYFDSSKVRTEIASITNVCNEFAPALLTGTVDP
                     VEYTEKFKAKLNDAGMKKVMKEMQKQYDEFRASQE"
     gene            complement(15834..16805)
                     /locus_tag="U0308_001097"
     CDS             complement(15834..16805)
                     /locus_tag="U0308_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM2316067.1"
                     /translation="MAEQLEAVSEIEQVRGEMEKPAKNKPAKDIIGFGKKMNVAMNIM
                     LAFLALICIFPFLYIIVISFSSESSLAANGFQLIPKEWSMEAYEYLWKMKGQLLQSYG
                     ITILVTVIGTVCSVAMIALYSYAISRPQFKYRRQFTFIAFFTMLFSGGMVPAYIVMTQ
                     FLHLRNSIWAMILPLAMNAFYIMIMRTFFLRSIPEPILEAARIEGAGELRIFLQMVVP
                     LSLPGLATIALFSTLGYWNDWFQASLYIDNPNLVPLQSLLMKIENNLEFMRQNSEIAY
                     TAGAFKSIPQDGAKMAMVVISTLPIAITYPFFQKYFISGLTIGGVKE"
     gene            complement(16824..17753)
                     /locus_tag="U0308_001098"
     CDS             complement(16824..17753)
                     /locus_tag="U0308_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2316068.1"
                     /translation="MKKVLSQIRANRIWLLMVLPGVLWFLVFSYLPMFGTVIAFKDYK
                     IDGKGFLSSIMSSDWVGLENFKFLFQTNDAFIITRNTVLYNLVFIIVGLFLGVALAII
                     FNSLLNKRGAKIYQTGMLFPHFLSWVVVSYFLFSFLSEDSGLMNNILLAFGQDPISWY
                     NDPKYWPFILIMMNVWKGLGYGSIVYLAAIAGIDRTYYEAAMIDGAGKWQQIRHVTIP
                     ALTPLMVILTILNVGKIFNSDFGLFYQLPRNSGPLYPVTDVIDTYVYRGLTSLGDMSM
                     SAAAGFYQSIVGFILVLLTNYIVKKINPEYGLF"
     gene            complement(17866..19350)
                     /locus_tag="U0308_001099"
     CDS             complement(17866..19350)
                     /locus_tag="U0308_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2316069.1"
                     /translation="MLKIVLVDDEPLILKGLESIIPEFEQSIEIVGTAKNGAIALELF
                     ANQDVDVLLTDIEMPVMNGLELIDEWKKRQPTTKTIVLSGFEDFHYVKRGLSAGIENY
                     LLKPLNEQELKETFIQIEKKQLTDSVIPREEAYYILRDNTIWRWLNLRINKEEWEERL
                     ALYDMILNSKENAVLIQIQPTKEINLTEWKNLSEQYRKDFPFMLLTPENEIIIGITEQ
                     TSISEQILAIHQDVKKRLSNEAFYLFISEKVQGEMMYPQAFRQLTRLLPERLVQEPGS
                     LIAYQKRTKHTWRPKRKQHQLAKLLVMNNEKEIKAWIQHFFKEWNDHKLESDPHQMLH
                     ILNELLVMMAESDPKELSESMGRIAEETSIEGLEEATLAYAIRYYNRKKQTDESKSPI
                     IQNVLSYITEHFAEGMSLKTLGNDFHINAVYLGQLFQKEMGEHFTDYLNRYRVNYAKE
                     ELLQTKDNLTIIAGKSGYTDMAYFYRQFKKHTGETPNRYRKIHQ"
     gene            complement(19350..21089)
                     /locus_tag="U0308_001100"
     CDS             complement(19350..21089)
                     /locus_tag="U0308_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM2316070.1"
                     /translation="MSMTQELPRKRVFKRMLLIFSLTSLFTVSLLLFFIYKYYTNIQL
                     DTNLQRAETIANKQLDALTEKQKALISLTQDIYRNSDLMQDVQIAMTNDYGSYTEQNI
                     DNYFKSKNFYSVDMQTYLHSYFSYDEDIIALQLISDDGSYSYTFPSRYREWKETVDTY
                     GEANIATEASKQGTFYTIENKIVVKQPINDPSTLKQMGYLLLYIDPTFLSKWITKDYQ
                     NSIFQIQNTKGVELYSNHPKKQIQTPEKQGWLHADNKKVYFQKTEDETSGLKNNTFLY
                     RVTDDSAPLIELTLFGIGLLLVIFSISINFVISRRYSKRILTIIGGMNRVEMGTLDAK
                     LPVDNNGDELTMISERFNHMTENLDAYVKKVYSLEMEEQKARLKALQGQMQPHFLYNS
                     LEAIRMNARVEGAKATSDMIYQLATLLRYTANHREITTLGEEINYVKQYVRFMEMRHE
                     QPIKLEINIEKRFNHTQIPRFALQPLIENFFKYAFKENQNPIVVITVTAENDNLQFRI
                     EDNGSGIDAEKLKEVQATIESKDETSHIGLANLNKRLQLLYGENYRLTIKSKANEGTI
                     ILFQVPQNTGGEK"
     gene            complement(21146..21757)
                     /locus_tag="U0308_001101"
     CDS             complement(21146..21757)
                     /locus_tag="U0308_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YesL family protein"
                     /protein_id="HEM2316071.1"
                     /translation="MKLIDKFSVISDWIIRLVWTNLVWLFLVLIGGIVLGFMPATVAL
                     FTITRKWARGDLDVPVWKSAWQTYKQVFVSANLAGAVFALIGIFLYADLRIVFELMQG
                     FWSTILYFFLMFLLFLVGIAFLQYFTVFVHFQMKNVRAYVGQAFLLAITSFKNTFMIV
                     VGLVFCAWLISKMPAFILFISGVLPSYWIMKINLHRFKQMEPK"
     gene            complement(21818..23122)
                     /locus_tag="U0308_001102"
     CDS             complement(21818..23122)
                     /locus_tag="U0308_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 125 protein"
                     /protein_id="HEM2316072.1"
                     /translation="MTNKVPASFNKWIEKVKMTFPENEKLHRMFEKCFTNTYTTTLQE
                     TEEGLPFVITGDIPAMWLRDSTSQIRPYLIVAEEDEEMATVIENLVKLQTNCILHDPY
                     ANAFNKSANGAGFQNDKTAMTDLVWERKYEIDSLCYPIQLAYLLWKSTNRTGHFTEEF
                     RKALHQIIEVFKIEQKHTEQSPYRFERENVRQSDTLNNNGKGTDVSYTGMSWSGFRPS
                     DDACMYGYLVPSNMFLVVVMDYVQEIAAAFYPDDKELLKDSADLRKEVAAGIETYAKQ
                     AHPYYGDVYAYEVDGTGRKLFMDDANVPSLLAAPYLGFCEKTDPAYQATRKLILSREN
                     PYFVEGSVLTGIGSPHTPDHYVWPIALSIEGLTAETEAEKQAVLEMLIAGDGGTDYMH
                     EGVNASNPAEFTRDWFAWSNAMFSEFVLSMCGVYVKGSPLSK"
     gene            complement(23126..25783)
                     /locus_tag="U0308_001103"
     CDS             complement(23126..25783)
                     /locus_tag="U0308_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HEM2316073.1"
                     /translation="MTRKKAHIISHSHWDREWFLPLESLRFRLVTLMDEVEALLDKED
                     GFHHFHMDGQMIMLEDYLAVKPAKREKMKQLVADGKLRIGPWYMLQDAFLTSGEANIR
                     NLQYGLEMAEEFGQVEKIGYFPDTFGLYGQVPQLMRQAGFDTVVFGRGVNPTGFNNQV
                     FDSAFASKYSEMFWESPDGSKVLGILLANWYSNGNEIPVDKEAAKVFWDKKLADVERF
                     ASTDEWLFMNGCDHQPVQTDLAEALEVARELYPEVEFIHSHFEKYQEAVKAGLAPEKL
                     QTVHGELTSQQSDGWSTLANTASSRIYLKQANAKIERLLERLAEPISVMATEAGVQYP
                     HEYLAYAWKLLMENQIHDSITGCSLDEVHREMEARFEKVEQATMAIIQNAARQITEQI
                     TTNEAGIPITVFHAGGLEATRSIELELETDAIHFSEMHFELIPDELAKLPEQSFRLET
                     STGEEIPVVVESLGIRFNYDLPERKFRDSYFARKYKLTFAVENLPAVGYETIYAHPVD
                     LVNESANQTQDLFLENRFLKVEVAANGTYTILDKEKAIEIAGVGAYEDAGDIGNEYMF
                     KETGDNLRINTLHSKPAIRVLREDKLGKTIEINHEIEIPESASSAFAEEKRRLVWHPD
                     RQSERSENFTTFKITTELTLNKHDKQLTIRVKLNNNVDDHRLRVLFPTGKQTETHQVG
                     SVFEVVTRANKQVKEWTNPAKDNRKQGFVASGNIVVASVGLPEYEVSEHGDKLELTLL
                     RAVSEIGDWGDFPAYEAECHREITAEFHVFLTDDSDVANSTIPAQVNACLTPIFAFQH
                     KSATKENILAEKRDFAEWKTEAGFVFSAFKLAKDNQPIIRFFQTASEPKQLQTMQPWQ
                     KSTILEETTGDAKKQFTASPNEIITLKGV"
     gene            26026..29136
                     /locus_tag="U0308_001104"
                     /pseudo
     CDS             26026..29136
                     /locus_tag="U0308_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465539.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
     gene            complement(29205..29405)
                     /gene="cspB"
                     /locus_tag="U0308_001105"
     CDS             complement(29205..29405)
                     /gene="cspB"
                     /locus_tag="U0308_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein CspB"
                     /protein_id="HEM2316074.1"
                     /translation="MQTGTVKWFNSEKGFGFIEVEGGDDVFVHFSAIEGEGFKTLDEG
                     QSVEFEIVEGQRGPQAEKVTKL"
BASE COUNT         8272 a         6271 c         5357 g         9644 t
ORIGIN      
        1 tcatatataa caatgcaagg agtggcaata atggacacag ttagaaaaaa tcgattattt
       61 cagcattcta caatggcagc acttgttggt gggcttttta gcggaacaac gagtttcaaa
      121 gaattattac aacacggtga cctcggtata ggaacacttg accaatttga tggtgaatta
      181 attattttag acggagaagc ttttcaaata cgatcagacg ggcaagctta taaagtaaag
      241 ccagaagata cgacacctta tgcgagcacc actttttttg atgctgatac ttctttttcc
      301 gtttccgaac cgacatcaaa acaagcggtg gaagaaaaaa tcgcagaatt agtacaagga
      361 ccaaatgttt tttatgcagt gaaaatgacc gggaatttcc gttatgtgga tacgcgcgtt
      421 gtaccaaaac aacaaaggcc ttatccgcca ctcattgaag cggtaaaaga acaaccaacg
      481 taccattttg aatatattac gggtacaatt gttggttttt ggacgcccgc ttatattagc
      541 ggtattggcg tttctggcta tcatgtgcat tttattgacg atatgcgtaa aatcggcggt
      601 catgtatttg attatgaaat gctggaaggt accgtagaag ttgcgcaaca aacagaattt
      661 gaactacaat tacctcaaac gacggaattc ttaagaagtg atttaagtac gccggatatg
      721 ttggaacaga ttgaagccgc ggaaaattga taaagaaagc tcccaaatta aattgggagc
      781 tttcttttat tctgtaataa ctttatgaac aagggttggt gctgttgcgt ggtcggaaat
      841 ttgaatgttt tcgtagattt ttgcttttac gttttcgaca tcttcttggt cagcgaaaat
      901 cgttacgagt gattcgcctt ccttaacagc atcgcccact tttttgcgta gcattaaacc
      961 tactgctaga ttgatttcgt cttccttcgt tgcgcgacca gcgcctagga tcattgcagc
     1021 aatgccaatt tcatcggcaa cgatttgact tacgaagcca gatgatttag cgggtacttc
     1081 gatttggtat tttgcttgcg gaagtttttc tgggtgatca acaatgcttg catcgccacc
     1141 ttgattggaa aggaatgttt tgaatttctc aagtgctgca ccgttttcga ttacttcaat
     1201 taatttagcg cgggcttcgt cgagtgtttc cgcttgtttg gctagtacga ccatttgact
     1261 accaagtaca agaactaatt ctgttaaatc ttctggtcct tggcctttta atgtatcgat
     1321 ggcttctttt acttctaaag catttccgat tgcttcgcca agtggttggg acatatcaga
     1381 aatgactgcc atcgtatttc taccaacgtt attaccgatg cgaaccattg catgtgctag
     1441 gttttcggca tcctcgtcgg ttttcataaa tgcaccagca cctgttttta catcaagtac
     1501 gattgcatct gcgcccgctg cgattttttt actcataata gagcttgcaa ttagtggtat
     1561 tgagtttacg gttcctgtta catcacgaag cgcgtacatt tttttatctg ctggtgtaag
     1621 attacctgat tgaccaataa ctgctacttt gtcgcgattt actaggtcaa tgaaatcttt
     1681 cttatctagt tcgatatgga agccttcgat agattctagt ttatcaatgg ttcctcctgt
     1741 atgacctaag ccacggccag acatctttgc aaccggtacg ccaactgctg ctacgagcgg
     1801 agcaagaaca agtgtcgtcg tatcaccaac accgccagta ctatgtttat cgactttgat
     1861 tccttcaatt gcggataggt caatcgtatc gccagagcca accattgcca ttgttaaatc
     1921 tgcgcgttct tgatcattca tatcttggaa aaagattgcc atggctagag cacttgcttg
     1981 ataatctgga atttccccat ttgtatagcc atcaatgaaa aactgaattt cttctgttga
     2041 caaagctttg ccgtcccttt tcttggaaat aatatccacc attctcattt ctcttcaccc
     2101 tttctttttg tccactttag cattttatgt acctttattg agaacggtta cactttttaa
     2161 gtaaaccgtt ttactaaaca agaacatgtg cttaacatgc tcactataac ttactccctt
     2221 actggttgtc aatacttttt gtactactac ggttgattag tgaaatatcg agtaaacgat
     2281 tctctaattt ctcggttgga ttttggagat ttttcagtaa tagttcggca gcaatttcgc
     2341 cgataccata gattggttgc cgaatggttg taagtggcgg tgtcatatat tcggaaagtt
     2401 caatatcatc aaatccgatg acgctaagat cagtaggaat atgcaggttt ttttcaagtg
     2461 cggctcggta ggttcccatc gccattaaat cattggttgc aaaaatggca ctcagatttt
     2521 cttggagtaa cttttgcgtc gcaacataac cgccattcat cgtctgatcc ccgcttacaa
     2581 tccaagtatc ttttacagta agtttatagt ctttcatgca tgccaagtaa ccctcgtagc
     2641 gttcatgtac gttataaaaa gatgtatccg aaataatgat tccgatgcgc gtatggccta
     2701 gtttgattaa atgctcggtc gccatataac cgcctttgaa atcatcaatc gcgatattcc
     2761 cttcttgcct tggattccgc tgacgatcga gtaaaatata cggagaacgc ttctcttcca
     2821 tgcgtttgat aacacctgaa agcagaatat tagggctggc gataattaag ccatcgacag
     2881 cccggtgcaa taattcttct acatataaat cttcacgttc tttatcatta gaagagttac
     2941 agagcataat catgtaacct tctttattca agtaatcttc ggcccctttt accatttgtg
     3001 aaaaaaaagg atccgttact tccgggacaa tcattccgat ggtgtttgtg tgactaacaa
     3061 tcatattttt ggcgaaaaag tttggtttgt aagacatctc ttttgctgtt ttcagaactt
     3121 tttcacgagt taagtcgcta aatcgttccc ctttaccatt caaaatttga gaaatcgtcg
     3181 taattgaaac gcctgtcttt tctgctattt cgcggatggt tgcagccatt taaactcccc
     3241 cagtcagatt atctattctc cttattttgc cacatttaag aataataata aaggggtttc
     3301 atccaaaatt agtaattatc tggtttggct ggtttttcgc cggaaacaat tgcaacacct
     3361 gcgcttgcgc caatacgagt tgcgcctgct tcgatcattt tttctacgtc ttctttcgta
     3421 cgaaccccac cagatgcttt tacgccgatg tttggtccta cagttttacg cattaaggcg
     3481 atatcttcgg cagttgcgcc acctgtggag aatccagtgg atgttttaac gaagtctgtt
     3541 cccgctttta cagcgatttc acatgcgcga actttttctt cgtctgttaa taggcaagtt
     3601 tcgataatta cttttactaa tgcttttcct ttggcagcat cgactacagc gcgaatatca
     3661 cgttctacta gttcgtcgtc tttgtctttt agtgcgccga tattaataac catatccact
     3721 tcttttgcac cgttttggat agcatctttt acttcaaatg cttttacttc aggggtattc
     3781 gctcctagtg ggaaaccgat aacagtacat actacggatt ctgctccagc aagttgttca
     3841 gcggataatt ttacccaagt tggatttacg catacggaag caaaaccgta ttctctcgct
     3901 tcttttgtta gtgttaaaat ttgttctttc gttgtgtctg gttttaaagc agtgtgatcg
     3961 atcattttgg caattgtcat tttaaaaact cctttaaaat tggatttggt ttcatcatat
     4021 cgcactacag aacatttgta aactaattga tgaaattttg ttcaagtagt tgttttgcgg
     4081 taaattggtc ggtaataaaa tgattggcat aaccgcctcg aagtgcgcca tgaatcgctt
     4141 ttatttttcg ttcaccacct gcgacaagaa tggctgtttc tttttgcttt aaatcttgca
     4201 agtcgatacc aatggttcgt tcgtccattt tctcgtcagc gatttcgccg ccaattgtga
     4261 aaaatcgcga acaaatatcg ccgactgctt tttcttttaa gcgagccttt tcttgatcgg
     4321 aaaaatagcc taggcggaaa agcagggcct catcacgcac ggttcctact gtaaaaatag
     4381 agatattggc ttttttacca agctcgatga tattttttat atggcggtcc gcttctacca
     4441 tttgtttagc gagtggatta tcaaggacta caggaagtgg aagtgatact ggcgcggtgt
     4501 cataagccgc accgaataac gctaatgttt cggccgcata cgtattgaca tcagaatgac
     4561 tcacaccacc tttaagttgg acgactttta tttctgcttt tagcggggct agtttttggg
     4621 caattttgta catcgttgtt ccccaactta cgccaagaat atcgccatca tggataattt
     4681 cttctaagta ttcagcggca ctttggctga tttgcttggt gatttcgcta taatcatttg
     4741 tttgactgaa tgcaacggtg acatttttaa gttggtattt ttcttttaaa gccacggcca
     4801 gttctgttag gttagaaaat ggatcttgga cttcgatttt gacgtatcct tttgttttcg
     4861 cgttttggag taatctggaa acggtcggtc tggatacacc taggcgtgtg gcgatttctt
     4921 gctgacctag atccgcctga taataaagtc tcgcaacctc tacgctgagc tgttctttct
     4981 gtttatccat ttcatccctc catcgttttc tttttagtat aacgtaacag cggggatagt
     5041 tcgagagaga agataaaaaa aagacagccg cggctgtctt tttcctatta aaagtcttct
     5101 tctatttctt caagcggcgc ggcatattca taaattccta accgcccagt ttcggcaact
     5161 tgattcgcaa gttcttttaa ggatagcgtt tcacggctga tgaatgcttc taataaaagc
     5221 ggaatattca cgcctgcgac aagttctact gcatcaaaat tccgaagtaa ccgaacgagt
     5281 acattaaacg gagtcccacc ttttaaatca gttagaaata agatcccttc tgttagatcg
     5341 agtttagcta cttcactggc aattttcgcc tgtaaatttt ccgcggattc attcacttca
     5401 aaaggaacaa aacttgtatt ttcttgttta ccgcaaatca tttctgcaga ttgaatgagt
     5461 tcttttgcgg catttccatg ggtacaaaca aaaattgctt tcatttttca aaccgccttt
     5521 ttaatagtct aactgacgat aatatcttct gatttccatt ggatgacagt taattttttc
     5581 cacgtgtacg tcaatgcgat tatttactgc gtggataata aatggtgata acgctcctct
     5641 gaatttggcg gaaatacccg gcatatcgta atcttttgca tcaatgactg tataattggc
     5701 acagatttgc ggaatgaaat taactactcg ctcgcttaaa gaacgctggc tatcttctgt
     5761 cacataaatg gtaaccgggg tatcgcgttc tacaatttca aacatgccat ggaaaaactc
     5821 gtgagactca attgattttg ttttaatcca gtgttgctct tcccaataac acattgcgta
     5881 agaataggtc gcgccccact ggttcccagc accaacgaaa taatgaatgt cgtcttgatg
     5941 atgttttagc gcaaattctt gaccaaattt atccgccgct ttttctactt cgacaatccc
     6001 ttcagcaaaa tgttgatcca tttcttgata aaacgcatcg taatcttcaa attcgccagc
     6061 taaatacata aaacgatctg ctaccatgaa gaattttaat tgttcattta acggatagga
     6121 gattaagtga tctactaaag tcgcaagttc tgcttctgct ttatcaataa acccaaatac
     6181 cgttgcgcca atttcattac attttttcac agcatctacc acttcttgcg tacttccagt
     6241 taccgatgaa atgactacaa gggtatcttt agtaacacgt ttattgcctg tcgttagaaa
     6301 cacagcagca ttttcataaa aagtttctaa tgccgttttt tctttcatat gcaccactgc
     6361 ttgcatggcg gacgcgtatg taccgccaat tcctagccag caaatattac taaagccgcg
     6421 gtcatgtatt tggtcaacta cttcattaat ttgcgggcgt aattttagcg ctccttccat
     6481 gttttctctc actttttgtt catcaaattt tagcactatt cattcctact ttctttggtt
     6541 aaattttgga tttcgttatt tggtcaaatt ctggaaaagc ggatacttct aaattaattc
     6601 cttttttctt ggaaatttca aaggataata aatgaaccgg aatagtcata aacagcggtg
     6661 tcagaagttc tgctgcccgc acaccgagta ataaatcatc tgtcttttcc ccgcctgcat
     6721 ccgcataaaa tgttcggatt ttctttacat ggccttgtaa aaattgtttt aatttttctg
     6781 cgcggtcttc tagtaagcct tgaggttcaa ggaagataat atagtcttgc tcggataaac
     6841 ctatataagg tccgtgcata tattcttcta actccttacc aaaagctgta atccggatgg
     6901 tttctgttac ttttgtttct ccttcgcgcg ctacaccata agcagcgccg tatcctatga
     6961 agaaaactcg ttccgcttcc atcaattcct gtgtatgcgc gtctacccaa gctgctgatt
     7021 tctctaccac ttttggtaaa ttagcggtaa tttttttcaa ttctgcaatt tccgcttgat
     7081 attcttcttc caacattttc tcttgtaaaa gggctagctc aagcgccatt aaattcaaca
     7141 tgagaatggt tgcgctatag ccaagcgtga catatggcat ctcttctatc cccatcccga
     7201 gatcaattgc ccgcgtactt tctttcgcaa tcgggcttgt taagtcgctc gttaaagtga
     7261 aaacaatgcc accttgacgc tcaatttctt ttacgagatg aatagtggaa taactgtgcc
     7321 caccttgtga tatagcgatg tataaggtgt ttttgtttaa gtgaagcatg taatttcctg
     7381 cagtagatgg ttcttccaca tatacgggaa tggcgagttt atccgacata tataactgcg
     7441 ctgcaaatgc cgcattagaa ctagaacctg ttgcaaaaat aacaattgct tgatagtcca
     7501 ctttctccat ttgaatgacc ttttgtaaaa gatcttttcg acttcggatg atattttcat
     7561 aaacactttg ttccgaccgg atataataat ccatgttttt cattttttca cctacttatt
     7621 ttaataaacc tgtgaacgct cctaaaattc caattcctgc gattaataaa agaatccaat
     7681 gtgcttttag tcctttttta tctaaccaga aaataaagaa ggtgaagcca agtgctagga
     7741 ttcctgggac gataccgtca aaaacacttt gaatcgttac tgcatcatca ccagagccaa
     7801 atttcattgg catgttaatg ttcaccatcg tggcgaccat tgcaccaact acggccagcc
     7861 cgataaccga agcaccataa gacagtttat ccattaatcc agttttttga attttttcga
     7921 taaaattagc tccgatattg tagccaataa ataatccata ataacgagtc agaatagctg
     7981 gaatattgaa aataagaagg aacaaaatcg gccctaacat atttccttga agtgctaagg
     8041 aagttccaat acctgtagcg ataacgcgta aagttcccca gaagaacgaa tctccaatcc
     8101 cactcagcgg tcccattaac gctactttta tattattgat ggagtctgtg tcaaaatctt
     8161 tatctttcgc agattgttcc tccatcgcaa tcgaaatccc tagcggaaaa gtggaaagcc
     8221 acggtgttac gttataaaat tctaaatgcc tttgataaga agaaattcgt ttatctttat
     8281 catttttaaa aattttgttt aaggctggta gcatggaaaa tccataaccg agattggatt
     8341 gtcgttcgta gttccatgac cattccatcg tgaacgagcg ccagaaaact ttcattaagt
     8401 ctttttttgt taatacgtca gaactcttca tcttcataat ttatacctcc atcattcgca
     8461 agtgctggct ctgtattcga attctttgga ccattgtcat ttttaagcgt tgcataacct
     8521 gttaaaatta gcgctaaaca tgcagcgaaa atcgctacgc ctgttacagg aacttttaaa
     8581 taaacagcta atgcgaagcc aaatacgaaa aatacggcat tcttcttatt gaccattaat
     8641 ttgagaagta aagcaaaacc atatgctggc agtaaacctg tcgcaattcc aagtcctgtt
     8701 ataacgaaag ccgggatggc atcaagtacg ttttggatga ctgggcttcc gactagatag
     8761 gacgttgcga caataatacc aattggtaag ttgatcgata aaaatccgcc gagcagttgc
     8821 attcgactga ttcctcgtga attaccctcg agtgcgtatt tatctgcttt atgaacaaag
     8881 taaggtaata cgaaaatgaa gcatagattt ttaacgacaa gtacaaggga agcaatcgga
     8941 attccaagtg ctaatgctac cgctgtgctc tcgccagtcg aaatcgcaaa ggctgttcct
     9001 agtatacttc ctgaaataat ttctggagga atagatgctc cgatagaaaa tgatcctaca
     9061 aaagctaatt ccaaagttgc tcccataata atccccattt gtacatcacc catgataagt
     9121 ccggcgagtg tacatgttac cagtggtctt gatagcatcg atgaaccaaa taaatattct
     9181 ccatttgcaa gcattgctgc aagtgcaagc aaaatcgctg ttccaaactg ttccataatt
     9241 tatcccttct ttcgtctttt atgcttcaaa ggttactttt ttctcgttag gcacttgttg
     9301 cataaataca tctacatttt ctttttgaag ttcttttaac ttcgctactt cttcaggtgt
     9361 taaattgatt gctttggaaa aattagctgt tccttctcgt tgctttgttc cgcctagatt
     9421 taacatcggg attttaccat tcgtaccatg gattaatttg taagcgtctt caactgattc
     9481 gacaacaata agcatgttgt atttgtcagt gacgccggaa ttaatcgctt cgatactttc
     9541 atcgatactt ttcatgacta gttttgccgc ctcgggttta gcaagacgta ttgccgactt
     9601 acggaaatcg tccgccgcta ccccatcatt tgccactaaa attgtattta catctaaagc
     9661 attaaaccaa gacacagcta cttgtccatg tagtaaacga tggtccactc ttagaaattg
     9721 aatcattttt tcttcctcct tcgtattagt taaaatcaac tacatatttg gtcgactcag
     9781 catcttcata atgatattgg atggcaattg gcatctcgtt ttctgcataa aagacactac
     9841 tcaatttgaa aacaggatca ttttcgtcta tatgcatatt tttgatttgc tcattcccag
     9901 ctaaaataag ttgaagttcc tgctcaagct caaataattt atatttacct gaattaacaa
     9961 gctcaataat attaataatt tgaaaatcct ttgcttgtaa atcagggtat aaacttaacg
    10021 gtaaaattaa gcgatctagt gtgacaccat gctcactttt ttggacaaac ttgatagaat
    10081 acacaagttc attctctttt ataccaaact tctctgcgta aaattttcca gctttacgga
    10141 tgtaaaagtc tttaatatct ttttttagat tttcattggt atcggttttc ataacacctg
    10201 tcatttctaa aatgttctga gctgttagtt ttggttgaac gtatagccca acaccgtttt
    10261 tacgaacaac taaaccttct tcgactaata aatctaccgc gcggcgaatc gttgtccgac
    10321 tgctagaaaa aatttcttgc aaggctgttt cgttcggcat tagcattccc ggcttatatt
    10381 catcgcgatt aatactatct tttatttctg aagctattac ttcaaaaagt ggctttttag
    10441 ctcccatttc actcatcctc caagtaatca aatatgtttt tcgcattgat tttgtatttg
    10501 atttgattac caattagata ttgtttactg tactcaaaag gttcatcatt ttgatcaaat
    10561 gctttactta ctacttcaaa aagtggcgtg tttagtggta cctttaatgc ttctgctagc
    10621 ttttcattcg ctgatacaaa gcgcaattct tcgcgcccgt aggtaggttt aatagcaaac
    10681 tgcttttcta acacattgta taacgaggaa ttatttaaat cgattttctc aataccagca
    10741 aatctcgtgc tatcaataaa agatatttca taggaaaacg gcttattatc aactattctt
    10801 cgccgaacca atttaaacac cggcttatct tcacttaagt ttaaaaagtg gttcacctcg
    10861 tctttgccgg ctactatttc ttgtgacatt acttctactt tttgttctcc cggcaattgg
    10921 ctgctcatgg aattcatttg caaaatattg attgtttgct tttgattgat ttcgattcct
    10981 tttcggtttc ttttttggat gaccgcttct ttttcaaggg tatcaagtga ccgtctgagt
    11041 gtagttctac tgacacctag ttcgttttca agcgcacgtt ctgatgggaa acttgtttct
    11101 ccggctgcta ctttttcttg gataagctgt cttagttgtt cttcactttg cactgctggc
    11161 gacaagtctt tatattccat atttccacct cttttttcaa atcatctatc tatttcactt
    11221 tttaaaaaga tacagcttca aacattttta ataccacttc attgtaaacg gttgcatttt
    11281 gtttgtcaat agtcttttta cataaaaaaa agcatgagtc agatttttcc atccaactca
    11341 tgctccattt gattatttag ttgtaggtag tgctccaact actgggtgcg ggatatataa
    11401 ttcttctaga tagttaactt ccgctgccgt taattgaata tttagcgcct ctaccgcgct
    11461 ttccagatga ctttcttttt gtgcaccgat gattggcgaa gtgatttcat ctttatttaa
    11521 tagccacgct aaagcaatct tatctcgaga tacttgatgt gtttccgcaa gttcagccac
    11581 acgttcaata atacctctat ctgcattcat catgtcatcg tatttggatt tttgaactgg
    11641 atccgtttcg gaacgattgg ttgtttcatt caaatctcgc gttaatcgtc ctgatgctag
    11701 cgggctgtat ggcgtaatcg caattttttc atcgcgacaa aatggaatca tttctcgctc
    11761 ttcttcccgg taaatcatat tgtaatgatt ttgcatggaa acgaattttg tccaaccgtt
    11821 tctttctgcg acgcgttgtg ctttttgaaa ctgccaagca tacatagcac tcgctccaat
    11881 gtaacgcgct ttcccggact taacgacatc gtgtaaagct tccatcgttt cttcgattgg
    11941 cgtattttca tcaaaacggt gaatgatata taaatctaca taatccgttt ctagtcgttt
    12001 taagctatgg tcgatttcgc tcaaaatggt tttcctggat aagccaccac tattcgggcg
    12061 atccgggcgc attgtttgtt gcaccttggt tgctaacaca acatcatcgc ggttagcata
    12121 gtcttttagt gcacgtccaa cgattttttc actttcaccg taagaataaa tattcgccgt
    12181 atcaaagaaa tttatgccta aatcgagtgc tttttttatg atagggcgac tgttcgcttc
    12241 gttcaaaacc catttatgaa tccatttgtc tttatcaccg aaccccattg tccctaaaca
    12301 gattttcgaa acatccatgc cagtgttgcc aaatttaaca tattccattc aaaaccctcc
    12361 tagttaattt ctagtactat tacagcataa accttgaagt ccactccaag tcaaccttta
    12421 actataaaaa aatctctcgg gaaatccgag agatttttaa cgttttaata aaattggtca
    12481 ggtagtaaag tttcgccgag tttgatgtta tcacggtaat caattggaat atctacaacg
    12541 acgggacctt ctgtttcaag ggcttctttt aacacatcac taagttctga cggtttagtt
    12601 acgcgaagtc cttttgcacc gaagctttcg gcgaatttaa caatatcgac atcaccaaaa
    12661 cgaactgctg cttctttgcc gtatttcatt ttttgttgga aggcgaccat gtcatagcta
    12721 ccgtcattcc atacaaggtg cacaagtggc gcacgcaagc ggacagctgt ttctaattcc
    12781 atggcagaaa ataggaagcc accgtcacca gaaatcgaaa ccactttttc acccggatgt
    12841 acgagtgttg cagcaatccc ccaaggaagc gcgacaccaa gcgtttgcat accgttactg
    12901 aaaagcagac ggcgtggttc ataggaccgg aaatgacgtg ccatccaaat ataatgtgaa
    12961 ccaacgtcga ctgtcacagt tacgttgtca tcaattgccg aacgcagcgt ttgaatgacc
    13021 gacaacggat gtactcggtt agtttcatca ctttctggtg gaacatctcg ttcttctaat
    13081 tgagcatgaa gttcttttaa ggtttcaagt tctttttccg ctaattctaa accgctgaat
    13141 ttcgcattca ctcggtctaa agtaagcgcg atgtttccga ctaattccgt cacaggttga
    13201 tagtagtggt caatatctgc tcggatgtca tctaaatgta caatcgttct atcacccgaa
    13261 gcattccagg cttttggatc atattcaatt ggatcgtaac ctactgtaat aactaaatca
    13321 gctttattta gcaaaatatc ccctggttgg ttgcggaaga gacctacacg cccaaagaaa
    13381 ttatcttcta aatcacgtga gatgacacca gctgcttgga aggtttctac aactgggatg
    13441 cttgtttttt ggagtaggcg acgaatcgca ccagttactt ccgggctaga tgctcgcata
    13501 cctaatagca atactggtaa tttcgctttt ttcaaacgag caacgagttt cgcaacttgt
    13561 tctttggaag ctggaccatt ttctggttta gcaagtgggc gaatcgcttt tactggtacg
    13621 tttggttcat tcacgatatc ttgtggcaaa ctgacaaaag cagcgccttg gtttggttct
    13681 gccgccgaac gaaaagcgtt agtgattgct tccgggatac tttcagcgtg aactacttct
    13741 tcgctatatt ttgtaattgg acggaaaagt gctgcattat ccattgattg atgtgttttt
    13801 ttaaggcggt cttgcctggt tacatttcca gctatcgcaa cgactggatc tccttcagca
    13861 gttgctgtta caagtccagt ggcaaggttc gatgcgccgg gtccactagt tacaagtaca
    13921 acaccaggtt ttccggttag acgaccgata gcggcagcca taaacgccgc attttgctca
    13981 tgacgactga caattaattc tggtccacgt tcttccatca catcgaaaac tttatcaatt
    14041 tttgctcctg gaatcccgaa tacatgcgta acaccttgat taattaagct gtctacaact
    14101 aaatccgctc ctgattttcc ttgtgttatt actttttctt ggtctttttc tagtttcgcc
    14161 atcgttatca tccttttgtt atataaatta tttaaatttt aatagtacag attttataaa
    14221 aacctcattt acaagactaa ttatactact caaaagaatt tttgcaaggt tactgactca
    14281 aaaactgtta tacaattata taaaaactgt tatacaaaaa aagaaggact tagataaact
    14341 aagtcctttc tggtatttat tcttgtgaag cgcggaattc atcgtattgt ttttgcattt
    14401 ctttcattac ttttttcata cctgcatcat ttaacttcgc tttgaatttt tccgtatatt
    14461 caacaggatc aacggttcct gtaagaagtg ccggcgcaaa ttcattacac acattggtaa
    14521 tcgacgctat ttcagttcga actttagagg agtcaaaata gaaacctaag cccggtgatg
    14581 cgactgattt tctattgaac tctttaaatt gatcccattt atctgctggc tcatcttcat
    14641 ataattttag aatgaagtga tttccaagcg catacgttgg catgctgtaa cgttccacac
    14701 gtgctggtag atcttgaatt ttaccgtcat ctaactcttt ataatgggtt ccttcaattc
    14761 ctttatcaac taaattacgt aaatattcat ccgtgttaag taaatcaagg aatttcactg
    14821 cttcttccgg gtgttggctc gtaacagaaa cagcttgaat cgcaccagtt acagagttat
    14881 ttttgatgat aggagtttca gcaattggct gtgtgactac tttatatttg ccgcctgtat
    14941 ttttatccca aatattttct gcatatggtt ggtatttttc gattcgcaca aaccagtttt
    15001 ctttatcgta tgaccacgga tctgtggagg ttgcgatatc ttttgtgaca tatccttttt
    15061 ggtagaagct atgaagcgat tttaggatat ctaatgtttc gggttgctca tagaagttga
    15121 cgattttgcc agtgtcttca tattgattta ctgcaaaagg aagaggtact gcattatcaa
    15181 tcaaatagtc atatgggaaa gctggcttaa agtctttgtt cccgccgatt ggtgtgatac
    15241 ttggttcgtt ttctttaatt gtttttaaca ttggttctaa atcgctaaag ttttttactt
    15301 tcgttacgtc cattttatat ttatcgacaa gatttttgtt aaaaacgtat acttgttgct
    15361 cgccgacttc tttgttcgaa ggaacaccgt aaatgtttcc gtcaatggtt gcaccttccc
    15421 aaagtacatc atttaactcg gctttcatat tcttgccttc tttatctaga tatttattta
    15481 atggcaagaa tgcgcctttt tgtgagtaag aaacgaattc tcccgctgca gagtaagcaa
    15541 tatcaaagtt ttctccggag ttaataacgg tttgcatccg tttaccgtag tcgccccagt
    15601 caatttgtgt catttctact ttgacgccaa ttttttcttc tgtatattta tttacttctt
    15661 tcattacttc ttccgtgtct ttttgtggcg ttccaatcat gtaccatttc agtgtcggaa
    15721 cttcatttgc atctgccttc tcatcgctcc cgcacgcgct taaacctagt agcaagcaga
    15781 gtgatgcgat gattactccc catttcttct tcattaaatt ccctccatct tttttattct
    15841 tttacgccgc caattgtgag tccactaata aagtattttt ggaaaaacgg ataggtgatt
    15901 gcgattggta atgtcgaaat aacaaccatc gccatttttg caccgtcttg tggtatggac
    15961 ttaaacgcgc cggcagtata agcaatttca gagttttgtc gcatgaattc taagttgttt
    16021 tcaattttca taagtagcga ttgtagcggc actaaattcg gattatcaat ataaagtgac
    16081 gcttggaacc agtcattcca gtatcctagt gtagagaaaa gcgcgattgt cgcaagccct
    16141 ggtaaagaaa gtggaacaac catttgtaaa aagatccgta gttccccagc gccttcaatt
    16201 cgagccgcct caagtattgg ttctggaata gaccgtaaaa agaacgtgcg cataatcata
    16261 atgtaaaaag cattcattgc tagtggtaaa atcatcgccc aaatgctatt tcgtaagtgc
    16321 aaaaattgcg tcatcacgat ataggcaggc accatcccgc cactaaatag catggtaaaa
    16381 aaggcaataa atgtaaattg acgacgatac ttaaattgtg gtcttgatat cgcgtaagag
    16441 taaagagcaa tcattgcaac actacatacc gtaccaatta ctgtaactaa aatggtaata
    16501 ccgtatgatt gtaatagttg tcctttcatc ttccataagt actcatacgc ttccatgctc
    16561 cactctttgg gtattagttg aaagccattt gctgccagag atgattcact agaaaaagaa
    16621 ataacaataa tgtacaaaaa tggaaaaata caaatgagcg ctaggaaagc gagcataata
    16681 ttcatcgcta cgttcatctt tttcccaaaa ccaataatgt ctttagctgg tttatttttt
    16741 gctggttttt ccatttcgcc tcggacttgt tctatttcac tcactgcttc aagctgttct
    16801 gccaaagcac ctcgcctcct tttctaaaat aagccatatt ctggatttat ttttttcacg
    16861 atgtagtttg tgagtagcac tagaataaag ccaacgatgg actgatagaa gccagctgcc
    16921 gcactcatac tcatatctcc aagtgacgtt aaacctcggt atacatatgt atcaataaca
    16981 tccgtcacag gataaagtgg tcctgaattt cgcggtagtt gataaaacaa accaaaatca
    17041 gagttaaaaa tcttcccgac attcaaaatc gttaaaataa ccatcagtgg cgttagtgca
    17101 ggaattgtta catgcctaat ttgttgccat ttgccagcgc catcaatcat tgccgcctcg
    17161 tagtaggtcc ggtcaattcc ggcaattgct gccaggtaga caatacttcc ataacccaag
    17221 cctttccaaa cattcatcat gataaggata aacggccagt atttcggatc gttataccag
    17281 gaaatcgggt cctgtccgaa tgcaagtaaa atattattca tcagcccact gtcttcgctc
    17341 aaaaaactga acaagaaata gctgacaact acccatgata aaaaatgggg gaaaagcatt
    17401 cccgtttgat aaatttttgc tcctcgctta tttagtaagc tgttgaaaat aatagcaagt
    17461 gctacaccaa gaaacagccc aacaataata aatactaaat tataaagaac ggtgtttcgg
    17521 gtaataataa aagcgtcgtt tgtttggaat aggaatttaa aattttcaag tcccacccag
    17581 tcgctactca taatactgga taaaaatcct ttcccatcaa ttttgtaatc tttgaatgca
    17641 atcactgtac caaacattgg taagtatgag aaaaccagga accaaaggac gcctggaagt
    17701 accattaaaa gccaaatccg attagctcga atttgtgata aaactttttt caatccattc
    17761 acccctcttt tttgtaagtg ctttcaacat ctttagttta tcgtttttac gtggggttaa
    17821 atagttgcgg atgtttagat ttatagacaa atattagaaa taattttatt gatggatttt
    17881 tcggtagcga tttggtgttt cgcctgtgtg ctttttgaac tggcgataaa aataagccat
    17941 atcggtataa ccagatttcc cagcgataat ggttaagtta tcttttgttt gcagtaattc
    18001 ttcttttgca tagttcaccc ggtagcgatt tagataatcc gtaaagtgtt cgcccatttc
    18061 tttttgaaaa agttgaccga gataaacagc attaatatga aagtcgttac cgagtgtttt
    18121 taaagacatt ccttctgcaa aatgttccgt gatataggaa agcacatttt gaataatggg
    18181 gctttttgat tcatctgttt gttttttgcg gttatagtaa cgaatagcgt aggctagcgt
    18241 cgcctcttcc aatccctcaa tactcgtttc ttcggcaatt ctccccatgg attcgcttaa
    18301 ctctttcgga tccgattccg ccatcatcac aagcagctca ttcaaaatat ggagcatttg
    18361 atgcgggtcg ctttccagct tgtggtcatt ccattcttta aaaaagtgct ggatccacgc
    18421 tttaatttct ttttcgttat tcatcactag aagcttcgcg agttgatgtt gctttctttt
    18481 cggacgccaa gtatgtttgg tacgtttttg ataggcaatt aggctaccag gctcttgcac
    18541 aagtcgttct ggaagcaacc tagtaagttg gcgaaaggct tgcgggtaca tcatttcacc
    18601 ttgtactttt tcactgataa acaggtaaaa agcttcattc gaaaggcgtt ttttcacatc
    18661 ttgatgaatc gctaaaattt gttcggatat cgaagtttgt tcggttattc ctataattat
    18721 ttcattttct ggcgtaagta gcataaatgg aaagtccttc cgatattgtt cagaaagatt
    18781 tttccattca gtcagattga tttcttttgt tggttgaatt tggatgagaa cggcattttc
    18841 ctttgaattt aatatcatat cgtataatgc tagtcgctct tcccattctt ctttgttaat
    18901 tcgtaaattt agccaacgcc aaatcgtatt gtcccgtaaa atgtaatacg cttcttccct
    18961 tggtatcaca ctgtctgtca attgtttttt ctctatttgt ataaacgttt cttttaattc
    19021 ttgttcattt aaaggtttta gtaaataatt ttcgattccc gctgaaagcc cgcgtttcac
    19081 ataatgaaaa tcttcaaatc cggagagaac aatagtttta gtcgttggtt gccgcttttt
    19141 ccattcgtcg attaattcta aaccattcat tacaggcatc tctatatcgg tcaaaaggac
    19201 atctacgtct tgattagcaa ataactctaa ggctattgcg ccatttttag ccgttccaac
    19261 aatttcaatt gattgctcaa attctggaat aatactttct aaacctttga gaataagggg
    19321 ctcgtcgtct actagtacaa tttttagcat tacttttctc ctcccgtatt ttgaggtact
    19381 tgaaacagaa tgatggtacc ttcatttgct ttactcttga ttgttaatcg ataattttct
    19441 ccatataaaa gctgcaatcg tttgtttaaa ttagctagac cgatgtggct cgtctcatct
    19501 ttactttcaa ttgttgcttg cacttctttt aatttctctg catcgattcc cgaaccattg
    19561 tcttcaattc taaattgtaa attgtcattt tctgcagtga ccgtaattac gactattgga
    19621 ttttgatttt ctttaaaagc atatttgaaa aagttttcaa taagcggctg cagagcaaac
    19681 cgtggaatct gcgtatgatt gaaacgtttt tcaatattga tttccagctt aattggctgt
    19741 tcgtggcgca tttccataaa gcggacatat tgtttcacgt aattgatttc ttcacctaaa
    19801 gtggtgattt cacggtgatt agctgtgtag cgcagtagtg ttgcaagttg ataaatcata
    19861 tcacttgtcg ctttggctcc ttctacgcgt gcgttcatcc taattgcttc tagtgaatta
    19921 taaagaaaat gaggttgcat ttgaccttgg agtgccttga gccgcgcttt ttgttcttcc
    19981 atttctaggc tatagacctt cttcacataa gcatcgaggt tttctgtcat atggttaaac
    20041 cgctcactaa tcatcgtcag ctcatccccg ttattatcga ccggaagctt tgcatcaagg
    20101 gtccccattt ccacccggtt catcccgcca ataatcgtta aaatccgctt agaataacgc
    20161 ctactaataa caaaattaat gctaatagaa aaaataacta ataacagccc aataccaaat
    20221 aaagtaagtt cgatgagcgg cgcgctgtca tctgttactc gatataaaaa cgtattgttt
    20281 ttcaagccac ttgtttcatc ttccgttttt tgaaagtata cttttttgtt gtcagcatga
    20341 agccatcctt gtttttcagg cgtttggatt tgtttctttg ggtggttgga atataactcg
    20401 actcccttcg tgttttgtat ttgaaaaatc gagttttgat aatctttcgt aatccatttg
    20461 cttagaaaag tcggatcaat gtaaagaagc agataaccca tttgttttaa tgtgcttgga
    20521 tcattaatcg gctgtttcac aactatttta ttttcgattg tataaaaagt cccttgcttt
    20581 gatgcttcgg tggcgatatt tgcctccccg tatgtatcaa ccgtttcttt ccattcacgg
    20641 taacggctcg gaaatgtata agagtaactc ccatcatccg aaatgagctg cagcgcgata
    20701 atatcttcat catacgaaaa ataagaatgt aaatacgttt gcatatctac agaatagaaa
    20761 tttttacttt taaaatagtt atcgatattt tgctctgtgt agctaccgta atcatttgtc
    20821 atcgcgattt gaacatcctg catcaaatcg ctattacggt aaatatcttg cgttaaacta
    20881 attaatgcct tttgcttctc cgtaagtgca tcgagctgtt tattcgcaat ggtttccgct
    20941 ctttggagat tggtatctag ctgaatatta gtatagtact tataaatgaa aaaaagtaac
    21001 aagctcaccg taaaaagact tgttaaagaa aaaattaaca acatcctttt gaaaacgcgc
    21061 ttgcgtggta attcttgtgt catgctcatt cactgccccc tcttcttttc tgattattgc
    21121 atactatcac caataatgta aggggttact taggctccat ttgcttgaag cggtgtaaat
    21181 tgattttcat tatccaataa cttggtaaaa caccagaaat aaacaaaata aaagcaggca
    21241 ttttcgaaat taaccatgcg caaaaaacaa gaccaaccac aatcataaaa gtatttttaa
    21301 agctagtaat cgcgagcaag aacgcttgcc cgacataagc gcgcacattt ttcatttgga
    21361 agtggacaaa cactgtgaaa tactgcaaaa acgcaattcc cacgagaaaa agcaagaaca
    21421 ttaagaagaa gtataaaatc gtcgaccaaa aaccttgcat taattcaaaa acaatccgca
    21481 aatccgcata aaggaaaatc cctatcagcg caaaaactgc acccgctaaa ttagccgaaa
    21541 caaacacctg tttataagtt tgccaagcag atttccaaac tggtacatct aaatcgcccc
    21601 gcgcccattt tctcgttatc gtaaataaag caaccgttgc cggcataaag ccaagcacaa
    21661 tcccgccgat caatacgagg aaaagccata ctaaatttgt ccagacgagc cggataatcc
    21721 agtcgctaat aactgaaaat ttatcaataa gtttcattct ttttctctcc tttgatagta
    21781 agagaaagcc tgagttttcg cccagacttt tcttttttta tttacttaat gggctgcctt
    21841 ttacgtacac accgcacatg cttaaaacaa attcactaaa catcgcattc gaccaagcaa
    21901 accagtcgcg cgtgaattca gccggattcg aggcgttgac accttcgtgc atataatccg
    21961 ttccgccatc tccggcaatc agcatctcta aaacggcttg tttttccgct tctgtttctg
    22021 ccgttaatcc ttcgatgctg agtgcaatcg gccagacata atgatcaggt gtatgtggac
    22081 taccaattcc tgtaagtaca ctaccttcga caaaataagg attttctcgg cttaaaatta
    22141 gttttctagt cgcttggtat gcaggatcag ttttttcgca aaaaccaagg tatggtgcag
    22201 cgagcaagct tggcacatta gcatcatcca taaataattt acgccctgtt ccatcaactt
    22261 catacgcgta aacatcaccg taatacggat gcgcttgttt cgcataggtt tcaatccctg
    22321 cagcaacttc ttttcgtaaa tctgcgctat ctttcagcaa ttctttatca tccgggtaaa
    22381 acgccgctgc gatttcttgg acgtaatcca tcactacaac taaaaacata ttactcggta
    22441 caaggtagcc atacatacat gcgtcatcac ttggtctaaa gccactccaa gacataccag
    22501 tatagcttac atccgttcct tttccgttat tatttaaggt atctgattga cgcacatttt
    22561 ctcgttcaaa acgatacgga ctttgctctg tatgtttttg ttcgatttta aaaacttcga
    22621 tgatttgatg caatgctttt ctaaattctt cggtaaaatg acctgtacgg ttggtacttt
    22681 tccataatag gtacgctaat tgaatcggat agcaaagtga atcaatttca tattttcgtt
    22741 cccaaaccag gtcggtcatt gctgttttgt cgttttgaaa tcccgcacca ttcgctgatt
    22801 tattaaaagc attcgcgtat gggtcatgca aaatacagtt agtttgtaac tttacgaggt
    22861 tttcaataac agtcgccatt tcttcgtctt cttccgccac aattaaatat ggtctaattt
    22921 ggcttgtaga atcgcgtaac cacatcgctg gaatgtctcc tgtaataaca aatggaagcc
    22981 cctcttctgt ttcttgtaag gtagttgtat acgtattcgt aaaacatttt tcaaacatgc
    23041 ggtgaagttt ttcgttttct ggaaaagtca ttttcacttt ctctatccat ttgttaaaac
    23101 ttgctggtac tttgtttgtc atctattaca ctccttttaa agtgatgatt tcgtttggac
    23161 tagcggtaaa ttgtttcttg gcatctcccg tcgtttcttc caaaatagtc gatttctgcc
    23221 acggttgcat cgtctgtagc tgttttggtt cacttgcggt ttggaagaat cggataatcg
    23281 gttggttgtc tttagcgagt ttaaatgctg agaagacaaa tccagcctct gttttccatt
    23341 ctgcaaaatc tcttttttct gcgagaatgt tttctttcgt tgctgatttg tgttggaatg
    23401 caaaaatagg agtcaagcat gcgtttactt gtgctgggat ggtgctattt gcaacatcag
    23461 aatcatctgt taggaaaacg tgaaactctg ctgtaatctc tcggtggcat tccgcttcat
    23521 atgccgggaa gtcaccccaa tcgcctattt cagatactgc gcgaagcaac gttaattcta
    23581 gtttgtcacc atgttcgctt acttcatatt ctggtaaacc aacacttgcg acaacgatat
    23641 ttccactagc aacaaagcct tgttttcggt tatctttagc aggatttgtc cattctttga
    23701 cttgtttatt cgcgcgtgtt actacttcaa aaacacttcc cacttgatgt gtttctgttt
    23761 gttttccagt cgggaaaagc acgcggagtc gatggtcatc tacgttgtta tttagtttca
    23821 cgcggatagt taattgttta tcgtgtttat ttagcgttaa ttctgtcgtg attttaaatg
    23881 tagtaaaatt ttccgagcgc tccgactgcc ggtcaggatg ccatactagg cgacgttttt
    23941 cttccgcaaa ggcggaactt gcgctttctg gtatttcaat ttcatggttt atttcgattg
    24001 ttttgccgag tttatcctct cgtagtactc gaattgccgg tttggaatgg agtgtattta
    24061 ttcgcaagtt atcgccggtt tctttaaaca tatattcatt accgatgtcg cccgcatcct
    24121 catatgcccc aacacctgca atttctatcg ctttttcttt atctaaaatc gtatacgtcc
    24181 cattcgccgc aacttccact tttaaaaagc gattttctaa aaacaaatct tgtgtttggt
    24241 tcgctgattc attcaccaaa tcaaccggat gcgcgtaaat tgtttcataa ccaaccgctg
    24301 gcaaattttc cacggcaaag gttagtttgt actttctcgc aaaataagaa tcacggaatt
    24361 tccgttctgg taaatcgtaa ttaaatcgaa tgccaagcga ctcaacaaca accggaattt
    24421 cctcgccagt acttgtttct aatcgaaaac tttgctctgg aagtttcgct aattcgtctg
    24481 gtattaattc aaaatgcatc tcagaaaaat gaattgcatc tgtttcaagt tcgagttcta
    24541 tggatctcgt tgcttcaagg ccacctgcat gaaataccgt aataggaatg cccgcttcat
    24601 tcgttgtaat ttgttccgtg atttgacgcg cggcgttttg aataattgcc atagtcgcct
    24661 gttcgacttt ttcaaaacga gcttccattt cacggtgcac ctcatccaaa ctacatcccg
    24721 tgatactatc atggatttga ttttccataa gtaatttcca agcataagct aagtattcat
    24781 gtggatactg gacaccggct tctgtcgcca tcacggaaat cggttcagcc aaacgctcta
    24841 ataaacgctc tattttcgca tttgcttgtt ttaagtaaat acgtgaagat gctgtgttgg
    24901 cgagtgtaga ccatccatct gattgttggc tcgttaattc tccgtgaacc gtttgtaatt
    24961 tttcaggagc aagaccagct ttgacagcct cttgatattt ttcaaaatgg ctatggataa
    25021 actccacctc aggataaagt tcccgtgcca cttccaatgc ttccgctaaa tcagtttgca
    25081 ctggctgatg atcacagccg ttcataaata accattcatc cgtcgatgcg aaccgttcca
    25141 catccgctaa tttcttatcc cagaaaactt ttgcggcttc tttatccacc ggaatttcat
    25201 tgccattgga ataccaattt gcgagtaaaa tccctaatac tttcgacccg tccgggcttt
    25261 cccaaaacat ctccgaatat ttcgaggcaa aagcgctatc aaaaacttgg ttgttaaagc
    25321 cggttggatt gactccacga ccgaaaacga ccgtatcaaa accagcttgg cgcatgagtt
    25381 gtggcacttg gccatataaa ccaaacgtat caggaaaata accaattttc tctacttgac
    25441 cgaattcttc tgccatttct agaccatact gcaaattacg aatattcgct tctccacttg
    25501 tcaaaaaagc atcttgcaac atgtaccacg gtccgattcg cagttttccg tccgcaacca
    25561 gctgcttcat tttttctctt ttagcgggtt tcacagccaa ataatcttct aacataatca
    25621 tttgcccatc catatgaaaa tgatgaaatc catcttcctt atcaagtaat gcttctactt
    25681 cgtccataag tgtaacgagc ctaaatctca aactttccag tggtaaaaac cattctctat
    25741 cccaatgaga atgagaaata atatgcgctt tctttctagt cattttgccc ctccaaatat
    25801 cctttttgta ttcgctttca agctaagtat agtaagggct aaagtgaatt gcaatgctag
    25861 gtgaaaaact actatgaata atccattttc ccttgatttg tccattacaa gaaagcgtaa
    25921 tccttcccac tctaagagaa tctcccagca tacccaaaaa aagccaaatt gacatctttt
    25981 gccgctatga tatattgaaa ccgttctaga caaaatagaa aggatatgag tatacatatg
    26041 tttttcacta aagataaact acgaggccgt ctggatgaag tcgcgcttta tcgttacgaa
    26101 aaaacttatc ctatccgtaa tttccaagca gccgaggata tggatggaga aatcgctgca
    26161 cgaccaaata acgtcttgta tgataacgaa ttgactatcg gggaaaactg gtcaggtagg
    26221 gaccgttatg tctggctcaa aacaaccatt acttttccag acaccaaaac tgacacgcgc
    26281 ttgattggct actttgactt tgggaatacc ggcgacggcc acaattccgg ctttgaatca
    26341 ctattatttg ttaatgggga accatatcaa ggcgtcgatc aaaatcaccg cgaagttctt
    26401 ttcccagata gttttgctgg aaaaaaggtg gaactggtct tccgtttatg gtccggactg
    26461 gaaggcggcg gcactcctac tatccagaca caccagttaa aagaagcctt tattggatac
    26521 ttaaatctcg tcattgatga tttgtatttc acgagtaaag caactttaaa aacactcgac
    26581 caactcgaag aaaaaaatcc aacccatgcg ccgctcctcc aagcgattaa tcgcgcttac
    26641 cttgcaattg attggagtac accaggatcc gaacaaaacc ttgcctcgat ggcaacagcc
    26701 aaccaaatct tacaagccgc actggaaaaa atgccgaaaa attttcctat caaagtggcg
    26761 gctgttgggc atacacatat agatgtagca tggctatggc gcttaaagca tactcgcgaa
    26821 aaagccgcac gatcattttc gactgtgctt catttaatgg aagactatcc tgaatactta
    26881 tttctccaat cgcaaccgca actttacgcc tatatcaaag aagattaccc agaaatttat
    26941 gcgaaaatca aaacgaaaat tagcgaagga aactgggaag ctgacggtgg aatgtggctt
    27001 gaagcagatt gtaatattcc tagcggtgaa tccctcgtac ggcaaatgct ctacggtcag
    27061 aaatttttac gcgaagaatt tggtaaacct tctagttttc tatggttgcc ggatgtattt
    27121 ggctatagct gggctttacc acaaatcctt cgtaaatcag gcataaagac ttttatgaca
    27181 accaaaataa gctggaatca atataatcgt atgcctcatg atacgttcca gtggcgcgga
    27241 attgatggta cagaaatttt gacccatttc atcactgcac cagaaaaaaa tagccgcatt
    27301 tcaacctata atggcaaaat gacagcacga gaacttgttg gtctttggga caaatatcaa
    27361 gataaagagg taaaccaaga attactactt gcttacggct acggagatgg tggtggcggt
    27421 gtgaaccgag aaatgctaga gatgcgccgt cgttatgata cgatgccagg aattcctgaa
    27481 gtaaaaccaa aaagtgctac ttcttatttc aacgatttac acgaaacgat aaatacgaca
    27541 gaccaatatg ttcatacttg gaacggcgaa ctttacttcg aatatcaccg cggaacttat
    27601 acgagccaag cctttacgaa aaaaatgaat cgaaaaatcg aactcggctt acgaaatagc
    27661 gaatggcttt ccgttttagc aaatctaaaa caaggaacgt cttacccaac tgaaaaatta
    27721 gcaggcattt ggcaaatttt acttcgaaat cagtttcatg atattattcc cggctcttcc
    27781 atcaaagaag tttatgacga cgctctaatt gagtacacgg aagctatgac ggaaaataat
    27841 acgttaattt ctaatcaatt gaccaattta actacagatg ccgatgaaaa aataacactt
    27901 tggaatagtt ccacttggtc cagaccgcga tacatcgaaa tttcacccga caatcaatcg
    27961 aaccatttag ccttttatga tgaaaataat gctccactgc ctgcgcaaaa attggtaaat
    28021 aatgcctggc ttatccagca tccaaacata cctgcgcttg gtgctacaac tatttctgtt
    28081 aaagaaacag caaacatttt agaacaacca tcttttcact acaaaaataa ccaattggaa
    28141 acacccttct atcaaatcaa atggaataaa gccggacaat tcacgtccat ttttgacaaa
    28201 aaaaataacc gccaagtaat agcggaaaat gcgcgaggta atgtatttca attatttgaa
    28261 gataagccga tgtggcatga cgcctgggat atcgacctat tctatcaata aaaacaaaaa
    28321 gaaatcagcg cgctagattc agttgaaata accgagaacg ggccactcca attcactatg
    28381 aagcaagtgc tacattccga aaaatctcaa atcactcagt ggattcattt ttatcacgag
    28441 agccctgaaa tcagatttga aaccgaggtc gactggcgag atcgtaacca gttgcttaaa
    28501 gtcgccttcc ctgtcgctgt gcatgccagt gaagctagct atgacatcca attcgggaac
    28561 gtcaaacgcc caacgcactg gaatacaagt tgggattatg ctcgctttga aaccgttgga
    28621 catcaatggg ctgatctttc ggagaaaaat tacggcgtca gtttgttaaa tgattccaaa
    28681 tacggctatg atattaaaga ttcaactatc cgccttacac ttctgaaagc agccggttat
    28741 ccagatccag atgccgattt aggaatccac caattcactt attcgctcta tccacatcaa
    28801 ggtgattttt tagacgggga aacagttcaa gcagcatggg aattgaataa tccaattttc
    28861 acttccaagg gggaaattga aactttttct cttttccaag tgaccaatcc ttacgtgatg
    28921 attgatagca ttaaacaagc cgaggacggt gatggtatca ttttacgatt gcatgaattt
    28981 gcgggaactc acggcgaagt aacaatcaca agtggttacc cgattacctc aatcacagaa
    29041 tgcaacttac ttgaggaaaa cgaaacatcg ctttccaatc cgacctttgc agtagctcca
    29101 tttgaaataa aaacataccg aattcattta gcataaaaaa acacgcagca aggcttctcc
    29161 ctaagaagtc cgctgcgtgt ttttattagt ttaacgtgaa cagattaaag tttagtaact
    29221 ttttctgctt gtgggccacg ttggccttca acgatttcaa attcaacgct ttgaccttcg
    29281 tctaaagttt tgaatccttc accttcgata gcgctgaagt gtacgaatac atcatctccg
    29341 ccttctactt cgatgaaacc gaagcctttt tcactgttaa accatttaac tgtacctgtt
    29401 tgcatatttc acaaacctcc aaaaattttc ttaatatgtt tcttttacta acgaaaaaga
    29461 tgttaacaac aagctaatca ttttttcaat tacaaaattc acatattagc aaagatactc
    29521 actccacatc aatatccttg ataa
//
LOCUS       DASDYK010000025        29493 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.025, whole genome shotgun sequence.
ACCESSION   DASDYK010000025 DASDYK010000000
VERSION     DASDYK010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 29493)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29493)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29493
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.025"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(347..1282)
                     /locus_tag="U0308_001106"
     CDS             complement(347..1282)
                     /locus_tag="U0308_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEM2316075.1"
                     /translation="MAGKMKLFSVTSERPLATKIADYLDIPLCEVELQKFSDGEVKIN
                     IEESIRGTNAYVVQSMNSNVNERLMELLIMVDALKRASVHSINIIMPYYGYARQDRKA
                     RSREPITAKLMANLIQRAGADRLITVDLHAAQIQGFFNIPIDHLSAIPLIGDYLIENY
                     GEKDVVVVAPDHSGVVRARRIADRLNAPIAILNRKPRPHEDEIMSVIGDVKGKVAIVV
                     DDIIDTGVRATTSADILLEKGAVEVIACATHSVMAGNATERLQNSNIKEVITSDSIDL
                     PEDKQFDKLTTISIGRILGRAIEGVQENRSLHPLF"
     gene            complement(1422..2693)
                     /locus_tag="U0308_001107"
     CDS             complement(1422..2693)
                     /locus_tag="U0308_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HEM2316076.1"
                     /translation="MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLT
                     VGVGFVGLGVITSLMLTTITPVTKALVENYNFKLTATDIGWGVGSSLAWGTEVVPFVF
                     VAIIATNILMIAFKWTKTMDVDIWNYWQPLFIASALYLTTGSMIIAILSSIINMAIIF
                     KIADWTQKDVENVLGLEGISLPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQS
                     RLGIFGEPMLMGLIIGGGLAAIAQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVI
                     SEAAHEFMEKRFPGRELFIGLDSAVGIGHPFVLSLGLLMIPITLILAFILPGNKVLPL
                     ADLTALPFYMIFAIVPSKGNLFRGIFTGIVIVIITLYLSGAAAPLMTELAGQIGYNIP
                     KDAVEVTSLAVGTQWYTWIVYYGLHWFGGIL"
     gene            complement(2708..3001)
                     /locus_tag="U0308_001108"
     CDS             complement(2708..3001)
                     /locus_tag="U0308_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2316077.1"
                     /translation="MKKKKIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQE
                     VASKVSTSKPDIIVSSTTVTGDVGDVPVVIGRSFLTGLKKQEAIDEILAILQD"
     gene            complement(3017..4063)
                     /locus_tag="U0308_001109"
     CDS             complement(3017..4063)
                     /locus_tag="U0308_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HEM2316078.1"
                     /translation="MKALKLYGKRDLRYEEADMPTIEQPDDVILKVKTVGICGSDISR
                     YSKLGPYVPGMVWGHEFSGEVIEVGSEVTDIEIGDRAAGCPALYCGECEYCKKGEFAR
                     CRKLTVIGARHPGAYAEYIKLPAENVVKIPDELDYEAAALVEPSAVVVHGFYHTKLQA
                     GDDVVVVGSGNIGLLAIQWAKVFGAKRVIAIDVDDKKLALAKEVGADVVINSLKEDPL
                     EVVAAHTDGLNADLVVEAAGSPITSAQVFAYAKKGGGVVFLGIPYADVTIERFYFEKI
                     VRSELTVWGSWNAISAPFPGKEWQTTIHFLANKQINIEPMITHRLSLAEGPEVFERIY
                     ERNEFFGKVLFFPE"
     gene            complement(4060..4710)
                     /gene="rpe"
                     /locus_tag="U0308_001110"
     CDS             complement(4060..4710)
                     /gene="rpe"
                     /locus_tag="U0308_001110"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEM2316079.1"
                     /translation="MAKIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFVPNI
                     AFGPDQIKMMKKGTKLQFDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQL
                     IKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKA
                     YIGNRPIQIEVDGGVNAELAKECTLAGADLIVVGSYLFEGDIEANLEKLSKGVLTE"
     gene            complement(4721..5119)
                     /locus_tag="U0308_001111"
     CDS             complement(4721..5119)
                     /locus_tag="U0308_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316080.1"
                     /translation="MGSFFASFVDWLIGSPGRFVVNLIEDNMLIFMFVVMIYATTILY
                     AKWTLAYYLPKKMNQLAEMKTWELDELYAAWQTEKKALPWYILVPSRNEFWVKSARNA
                     PESTKLLHFSQQKLKLSDKEKLQKIIEIQS"
     gene            complement(5136..5603)
                     /locus_tag="U0308_001112"
     CDS             complement(5136..5603)
                     /locus_tag="U0308_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2316081.1"
                     /translation="MDVLEYFKEEMVRFSNEQDKEKLLTEMAEQLCEVGAVKPSYKDA
                     VIKREKVFPTGLLTAHAGVAIPHTDSEHVIRPVVAVRILKKPVSFIEMASDNEAIDVR
                     IVFMMALRSADEQLDMLQTLIHLIQDEEVMTTLLKAQETGDVLSAIEHFSKNN"
     gene            complement(5631..6233)
                     /locus_tag="U0308_001113"
     CDS             complement(5631..6233)
                     /locus_tag="U0308_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEM2316082.1"
                     /translation="MDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECT
                     GKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGG
                     NTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTM
                     AVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK"
     gene            complement(6237..8297)
                     /locus_tag="U0308_001114"
     CDS             complement(6237..8297)
                     /locus_tag="U0308_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2316083.1"
                     /translation="MYLDNRSKTLFQEVIKNPNITNKQLEVKYKLSRYQISYSFQKVN
                     EWLKWKNYPEVKRSKNGRFILEPELTALFSEKETRDPSVEYLPSENERANLILLMLLT
                     AKEELSLAHFTTKIQVSKNTILRDLKVAQKLLPKETTVTYSRASGYQLAGSEWELRKV
                     LTQVVSSVKEMFRGEHYFLSYSGIEKVQLMEIRRTLEEAEAMMQIKFTYEQIELLPYL
                     LSVMFLRIRDRRLIDTAFHIDEKSLSDTREYHITDILLEKTGPVPEQERLFITLQLLT
                     TNIFSGEILTEKLTEDLEKVVLTCLDLFEKKALVSLKNKHILIEKLLLHLKPAYYRIK
                     YQMNLEDTLYEKFNQEFEALNFIVKEAFDPLAKFIGREIPAGEIFFISLFIGSDMIPQ
                     NDIYHKQKRAIVLCPSGVTFSKIMENILVKLFPEIHFYPTISVREYAFFKAEVDIVFS
                     SIPLKDGENVFVVQPFMNDIEKTQLRQHVLQNLFGMGNQLTSIDKIMEVVERNADIKD
                     PNAIRDGIIDILSANTATDENKRVKKVYLHDLITEDNIMICEDVKNYQEAIRLASQPL
                     LLQQAITANYVKTMIDNHKFHDPYIIIGEDIAIPHAMPNAGVNRLAMSLLVVKNGVYF
                     SETEQVHFVIVIAPVDKEQHIEALYQIVHLAENHQILDDLLENVTKEKVMQTINQLVI
                     REDE"
     gene            complement(8405..9055)
                     /locus_tag="U0308_001115"
     CDS             complement(8405..9055)
                     /locus_tag="U0308_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TalA family protein"
                     /protein_id="HEM2316084.1"
                     /translation="MHLDSANLEDVKKIQASSIFKGITTNPTILVKEKCNRQTAINRI
                     LELTDKQVFVQTVGFSYEEILADARMLLAMFGKEKIAIKIPAHEAGINVIDTLKKEDK
                     TIQILGTAIYSADQAIAAALAGADFVAPYVNRMSAANIDPFKEIAGMRHFFDKKALKT
                     QIMAASFKHSGQVMQAYESGADTVTIPYEIYSQMTNKVLAVEAIRVFNEDATLYEK"
     gene            complement(9062..9730)
                     /locus_tag="U0308_001116"
     CDS             complement(9062..9730)
                     /locus_tag="U0308_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEM2316085.1"
                     /translation="MKMIAASIMCSDSLHLADELRALEQANVKMLHCDVMDGVFVENA
                     AMGAYVLQDIKNNTDMLLDIHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATIKH
                     IRALGIKPSIAISPDTEIEQIYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQR
                     ELESHTNKPLIEVDGNIFEETVRLLEPIGADVYVVGTAALFNDKAGSYTEKLAPLREI
                     IQER"
     gene            complement(9727..10176)
                     /gene="rpiB"
                     /locus_tag="U0308_001117"
     CDS             complement(9727..10176)
                     /gene="rpiB"
                     /locus_tag="U0308_001117"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEM2316086.1"
                     /translation="MEIAIAADHGGFQLKEKIRAHLIESGYTVKDFGCYSLESVDFPE
                     YAAKVGHFVATENSLGVLCCGTGIGMSMAANKIKGVRAAVVSDAFSAMMTRRHNNSNV
                     LCLGERVLGDSLALLLLDTWLAAEFEGGRHNTRLAKLAELEEPEEDK"
     gene            complement(10343..10567)
                     /locus_tag="U0308_001118"
     CDS             complement(10343..10567)
                     /locus_tag="U0308_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 domain-containing protein"
                     /protein_id="HEM2316087.1"
                     /translation="MKLLLKNINELAAKQKSEGLTAFEKERQAALRQEYLKKIRGTVQ
                     DNLHHVTIIDPLGDDVTPKKLKEIQAELRG"
     gene            complement(10642..11601)
                     /locus_tag="U0308_001119"
     CDS             complement(10642..11601)
                     /locus_tag="U0308_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEM2316088.1"
                     /translation="MQKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFR
                     IFTAAITVIIILFITKKLRLPTKWEFGLIFLASIFNIVIHHFFLSNGLKLTTGTNAGL
                     ILGSAPIVVAIFSVVFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIF
                     IAMASQAFSFIIIKKLAGSMDTGLMTGYMLFLGSVMLFGLSRFMEPGGMSELVAVHSW
                     KLWLLFVVSAVVATAFGNFVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKI
                     PQLVGFGFIIIGVLLGSGALMDLIYERKKTKVRDPEKLLEKEV"
     gene            complement(11787..12380)
                     /locus_tag="U0308_001120"
     CDS             complement(11787..12380)
                     /locus_tag="U0308_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEM2316089.1"
                     /translation="MKKLLFLGDSVTDAGRDFENDRELGHGYVKIIADQLEQEDVTVI
                     NRGVSANRVADLHRRIEADAISLQPDVVTIMIGINDTWFSFSRWEDTSVTAFKEVYRV
                     ILNRIKTETNAELILMEPFVLPYPEDRKEWRGDLDPKIGAVRELAAEFGATLIPLDGL
                     MNALAIKHGPTFLAEDGVHPTKAGHEAIASTWLEFTK"
     gene            12572..14332
                     /locus_tag="U0308_001121"
     CDS             12572..14332
                     /locus_tag="U0308_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEM2316090.1"
                     /translation="MTAKITEKTLFSPSFEYVDNGIEHGVLSPFETKEIILEKGQQIA
                     EGFKPLDCSIKMLKDVPVKMRDGITIYTDIYLPITEEKVPTLIAWSPYGKSAGTAPRY
                     KNLFNMLGMGNAWNSGLTKFEAPDPAYWCAHGYAVCNPDMRGIAHSEGNTTMIGSQEA
                     EDGYDLIEWLAKQSWSNGKTALTGTSYLAFSQWYIAAEQPPHLTCINPTEGLADGYRD
                     LAFIGGIPDPNFIERLQINHVSAKNSQREDLTKEMEAYPLADSAIWKDKVADPSKITI
                     PAFVIASYSNTLHTMGTFRSWRSLGSKEKWLRIHDRQEWPYYYDENNVEELRRFFDYY
                     LLGKENNWTDTPTVRYALIDFQGGNQTDLPSEVFPPTNSENKRYYMNGLLRTLQETPT
                     SDDFKVSYTTENLPGRASFQMTFDKETHFVGYPKAKLFMEVDGYDDLDVFVWLQKLDK
                     FGNVLSEFVVPNHGAALQDFTQEGASALRYKGAWGRLRASMRQLDSQVSTDEIPAYSF
                     DKVEKLSSGEIVELDIILSPIGLTYKAGETLRVVVSSKDELGSVMPGTPGCTPNNKGM
                     HILHTSKEHPSYIQLPIINK"
     gene            14407..15315
                     /locus_tag="U0308_001122"
     CDS             14407..15315
                     /locus_tag="U0308_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2316091.1"
                     /translation="MKLSNLKYFVDVAMEGSFTRASEKLFISQPTLSRRIKELETELG
                     VELFIRNRHSLELSSAGQQFLIEVNDILNRVNKLSHMFDNQKTADEAGQLLKIGYLSN
                     FNMNAMYELLESFKQSHPHVQFSLKPDTPMNLAEGLSNGQYDLVFNLSAYFQPNMSIE
                     EVLFIKNHLQIAIPADHRFRKKKKVYFNDLKQEIVILLERKQSPIIVDYVVSQCTKHG
                     FNLKANSYVKDLDEGLAMTSVGEGLAFLYSGMNDGTLEDKYNIKIMDIQEERNDQNIV
                     AAINKQSEITLLQELFSFIKSSLLTK"
     gene            complement(15384..16142)
                     /locus_tag="U0308_001123"
     CDS             complement(15384..16142)
                     /locus_tag="U0308_001123"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEM2316092.1"
                     /translation="MNKVVVKNVTFGEGAPKICVPMVGKTVAALKEEAEMLQTIDLDV
                     VEWRVDFFEDVKDLAKVEAALDEIRTILPETPILFTFRSAKEGGELAVGDEFYFELNE
                     TLASTGKIDLVDVELFNEEADVLRLIETAHKNNVKVVMSNHDFDKTPAKEEIVSRLTR
                     MEALGADLPKIAVMPKSAGDVLTLLDATNTVSEKANQPIITMSMAGTGVISRLAGEVF
                     GSAMTFGAAKKASAPGQIDVNELRHVLDLLHKQF"
     gene            complement(16208..17083)
                     /locus_tag="U0308_001124"
     CDS             complement(16208..17083)
                     /locus_tag="U0308_001124"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEM2316093.1"
                     /translation="MTNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYV
                     YLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN
                     DDGVLTGHITDGTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIF
                     NRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFE
                     GETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIW
                     THKEMPVDYIKEILF"
     gene            complement(17183..19177)
                     /locus_tag="U0308_001125"
     CDS             complement(17183..19177)
                     /locus_tag="U0308_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEM2316094.1"
                     /translation="MTDYPSIFEPLTVKRMTIKNRVIMPPMGTNLAGLNGEFLEEHMN
                     YYEQRAKGGTGLITIENACVDFPYGTNGTTQLRIDNDQYIPGFYKLTERLHKHGTCVS
                     IQINHAGASAYPARLNGLQPVSASDIPSKKGGTVPRPLTVEEIYEIVNKYGDAARRAQ
                     QAGFDAVEIHGGHSYLLCQFLSPLYNKRTDEFGGSPENRARIVKLILEKVRAEVGPFF
                     PIVLRFSADEFTEGGNHLEDILELLDYCQEEADILNVSAAINDNLYLQIDQMNLEDGW
                     RSYLAKAVKDKFNKPTITSGNIRSPKAAEKILSEGYADLLAMGRGLIAEPNWVNKVAT
                     GQEDMLRKCISCNIGCADHRISKSKPIRCTVNPDIIHEDKYKETKVTRPTNVVVIGGG
                     TAGLEAACTAAEVGCNTTLIEASEQTGGLARAIANLPDKSRIADFPNYLANRAEKLTN
                     LKVITGTKADTALIDTFNPDVVVNATGSKPLLPPIKGLHDVIDKEGSKVHSIFGLISN
                     IDDFTEFSNKKVAVIGGGAVGLDVVEYFSERGSDVTIVEMMPLLGKDLDMITRLSMMD
                     IIEKNNVDVQTETALTEVAADHFKVKHDGVDAEIPFDYGFVCLGMRPERPLMEELAAY
                     GKEKQIEIVNIGDSAATRKILEGVREGRNILTTLEKIGSL"
     gene            19375..20268
                     /locus_tag="U0308_001126"
     CDS             19375..20268
                     /locus_tag="U0308_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2316095.1"
                     /translation="MNLRQLYYFKKLAEKEHYTIAAAELSITQPSLSHSIAELERELG
                     VYLFEKQGRNIRLTKYGRFYLTYVEKSLAELEKGEKLLHELTSPSHGNIDLGFIYTMG
                     AHTVPELVQNFTKVESHKDITFSFFQGATKSIIPDLKNEKFDLAICSYVENEPDIEFL
                     PLTKQELVVVVAENHPLAKHDSIDLKDTADYSYIFFSDTSGLRPLIDSLFAEINIQPK
                     IGCYVEEDTAMVGLVSVDYGISIMPKISSLAHYNVKVLSINEPKHDRFIYLASLKNHY
                     ISPASKAFKDFALRYGKKHFL"
     gene            complement(20305..21033)
                     /locus_tag="U0308_001127"
     CDS             complement(20305..21033)
                     /locus_tag="U0308_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM2316096.1"
                     /translation="MTEEFVNKEDALKNYNAKEFRTPDGYTSDMILTTVKELNGKPTL
                     HILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESADQAAARELEEETSLTGIPLIPF
                     GVFDKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAADIGLFSMTEALELPLAFDHL
                     DMLKKAYSAITEEFLLTTAIRDFLPETFSAELLYQTLDGCTKPGILPDEVEFMENIEY
                     LPYLEKVGELYRFNADAEAGSIYF"
     gene            complement(21125..21295)
                     /gene="rpmF"
                     /locus_tag="U0308_001128"
     CDS             complement(21125..21295)
                     /gene="rpmF"
                     /locus_tag="U0308_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEM2316097.1"
                     /translation="MAVPARRTSKAKKNKRRTHKGLTTPGLSRDSETGEYRMSHRISP
                     DGTYKGRTILEK"
     gene            complement(21360..21935)
                     /locus_tag="U0308_001129"
     CDS             complement(21360..21935)
                     /locus_tag="U0308_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEM2316098.1"
                     /translation="MIEKTIKERRSIKKANDAPISRETVNTILEQAAYAPFHSKVEPW
                     NVYVLHTLAEKERYIEKIIEFNEREQGVSFSEAEIADLKAGYAKKIITPPYLLIVTTN
                     IIGHGKKDFESIGATSAFIQNIQLLGWEAGIGMIWRSNRFIFDAKFAEDLGIPSEQKI
                     VGTLHLTSLAEVPEAKPRRPLNEWVKNLADL"
     gene            complement(22169..22546)
                     /locus_tag="U0308_001130"
     CDS             complement(22169..22546)
                     /locus_tag="U0308_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316099.1"
                     /translation="MKNTVHDSEILSYHADFENSQLIMFVKDEENRKYKVIFEGLLTF
                     CFEHQMSNSIILDIVKGEVSSFISEKSILLSEGKNYFWPLDYESEDELLNYLNEKKLN
                     YYELQASYGLNGWILCSHYHIEL"
     gene            complement(22559..23860)
                     /locus_tag="U0308_001131"
     CDS             complement(22559..23860)
                     /locus_tag="U0308_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LXG domain-containing protein"
                     /protein_id="HEM2316100.1"
                     /translation="MSRIDIGEIQDFAFQLRAANQTGRKIIQGVKTTVTNYVEDGSLK
                     GKAVEASKNYFQMTYIPLCDTIIEAMNESEERLKRYIQDFHDQVDLSPNAKIDADGLY
                     ELGQMIDRIESKKEALYQRMNSSTEGQMQTYRSQLATAYKQENILEKYLAFEQSHGAF
                     FDHLTDLVQGIQQTVRELQSNIQFDSQTGSYDLSKLNFATVNRMRKTLGKASATDTTV
                     YNFASYSKVKQGVMWILSKDGKVDIKATEAYNTASFNGELPKESKQATEEGELLKATL
                     ESLKQNKDPITGQEISKAQSFGILTSLVFGYTTKGYQGKKLTISKNTLIKLRQADKTV
                     IERIKKTSRIDYEEIVKKGSKMPKHIIVENKQSLPGKAMPSSSADLLNPDGSVKQRRY
                     YDEKGRAKEDIDFNHSDDGTHEFPHRHEWDWDRKPPRKPSK"
     gene            complement(23857..24225)
                     /locus_tag="U0308_001132"
     CDS             complement(23857..24225)
                     /locus_tag="U0308_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA double-strand break repair Rad50 ATPase"
                     /protein_id="HEM2316101.1"
                     /translation="MDSNNEKLKQQLQTLQKQQKDAELSLYMLKHEQNERIWLEEDFE
                     RICYEERESLELMREVWQGDQARNFGYYLEDLQADEKNKWCQTFQAEEEKRQEKINTY
                     QKNIYQLESKQQDIQKELFQ"
     gene            complement(24353..24718)
                     /gene="isdG"
                     /locus_tag="U0308_001133"
     CDS             complement(24353..24718)
                     /gene="isdG"
                     /locus_tag="U0308_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme oxygenase IsdG"
                     /protein_id="HEM2316102.1"
                     /translation="MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGF
                     ELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSFKKAHGRTKDTREQREDRKGIVG
                     NAIARFEVVHVQNPVIVEK"
     gene            complement(24876..25355)
                     /locus_tag="U0308_001134"
     CDS             complement(24876..25355)
                     /locus_tag="U0308_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM2316103.1"
                     /translation="MEVEIVERNAFTAVGKKRTFSVENDAQKEKISQFWQEANTNGDA
                     ERINELAEFATIDGILGVCKMNGDKMDYYIAIESELTPPADMEKLIIPASKWAIFKSV
                     GPLPSAIQKVWEYIYGEWFQTSNYAHGNAPELEVYTEGDTTAADYYSEVWIPVVEKE"
     gene            complement(25445..26548)
                     /gene="rlmN"
                     /locus_tag="U0308_001135"
     CDS             complement(25445..26548)
                     /gene="rlmN"
                     /locus_tag="U0308_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEM2316104.1"
                     /translation="MEKSSIYGLTWTKLTEWLEAHGQKKFRATQVWDWLYRKRVKTFE
                     EMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKYLFKLSDGNLIETVMMKQEYGL
                     SVCVTTQVGCNIGCTFCASGLLKKSRDLTAGEIVEQIMNVQHYLDGRNLEERVSHVVV
                     MGIGEPFDNYDNVMDFLRVINHDKGLAIGARHITVSTSGLAPRIIDFANEDFQVNLAI
                     SLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEAL
                     ELAALLGEHRHLAYVNLIPYNPVDEHIDYERSTKEDVLAFYDTLKKNGINCVIRREHG
                     TDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE"
     gene            complement(26699..28399)
                     /locus_tag="U0308_001136"
     CDS             complement(26699..28399)
                     /locus_tag="U0308_001136"
                     /EC_number="4.2.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oleate hydratase"
                     /protein_id="HEM2316105.1"
                     /translation="MKNKKRTLVALTGAAIGTGIAAKKISEQKAAEKERAVDEAIKAR
                     YYGDKQVYFVGGGIASLAGAVYLIRDANFDGKNIHIIEGMHILGGSNDGAGSVEHGFV
                     CRGGRMLNEETYENFWDLFSSIPSLDMPNFSVTEEILNFDHLHPTHAQARLVDKDRNI
                     LDAHSMGFNNNDRMLMTKLLATPEEKLDNLTIRDWFDEHFFETNFWFMWQTTFAFQKW
                     SSLFEFRRYMNRMMLEFSRIDTLEGVTRTPLNQYESLILPLKTFLDKHHVDFTINQTV
                     EDIDFKDAPGITATALHLSDGSTIKLGPDDDVIMTNACMTDSATLGDMNTPAPKPEEK
                     PISGELWYKVAQKKPNLGNPEPFFAHEEETNWQSFTVTCHGDKLLKRIERFTGNIPGS
                     GALMTFKDSNWLMSTVVAAQPHFKAQDANTTIFWGYGLYPDRVGDFVKKPMKECTGEE
                     ILYELMCHLNWQDDFEEIKADIINVIPCYMPYIDAQFEPRAMSDRPAVVPEGSTNFAM
                     ISQFVEIPKDMVFTEEYSVRAARIAVYTLLDIDKKICPVTPHNRDPKVLAKATQTMFR
                     "
     gene            complement(28509..29069)
                     /locus_tag="U0308_001137"
     CDS             complement(28509..29069)
                     /locus_tag="U0308_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2316106.1"
                     /translation="MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFY
                     YHFTDKYDLLTWTYENDFFHCLADGITLENWDKHVLKMLESIKENADLYKNTVSADAS
                     ILSFCFSKLTNSLFMDLFEKIDTNGAVNEADRVFYAEFFSYGCSGVLIKWITRGFKEA
                     PEMIANQLFRLAKDTEFLANSMYREN"
     gene            complement(29321..>29493)
                     /locus_tag="U0308_001138"
     CDS             complement(29321..>29493)
                     /locus_tag="U0308_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316107.1"
                     /translation="GYLTKIVFKDDPNLKYEYSYDERYEFPHHIYVLVFKDGSSQEDD
                     QVKHPPLQEQND"
BASE COUNT         8329 a         6289 c         5172 g         9703 t
ORIGIN      
        1 aagcaattaa aatgaaagtc attacttttg gttattttgc tgcttctgca tttacaattc
       61 acaatgagta agtaaacaat actacacgct attgttgttt tccaaaggaa ccaaatttat
      121 atttcacatt aagtaactaa aactttcaaa ggtaatccct tcatcatgac tgaggagtcc
      181 atttacattt caaaataagt agctaaaacc cgctaacttt tcttcttact cccatcttac
      241 ctcaaagagc tatttctgac gattcccggt gtttttcacg ctactcaagg tcgacagata
      301 acaaaaaaac agcaactcta ctaagttact gttttttgct tattctttaa aacaacggat
      361 gcaacgagcg gttttcttgt acgccttcga ttgcgcggcc taagattcgt ccgatggaga
      421 tggttgttag tttgtcgaat tgtttatctt ctggaagatc gatggagtcc gatgtgatga
      481 cttctttgat attggaattt tgtaagcgtt cggttgcatt tcctgccatg acggagtggg
      541 ttgcgcaagc gataacttct acggcacctt tttcaagtaa aatatcagct gaagtagtgg
      601 cacggacgcc ggtatcgata atatcatcga caacgattgc gactttgcct ttcacatcgc
      661 caatgacact cataatttcg tcttcatgtg gtcttggttt acggtttaaa atggcgattg
      721 gcgcgtttag tcggtccgcg attctgcgtg cgcgaactac gccactgtga tccggcgcga
      781 caactaccac gtctttttca ccgtaatttt ctatcaaata atcaccaatt agcggaattg
      841 ctgaaagatg atcgattgga atgttgaaaa agccttgaat ttgagctgcg tgtaaatcta
      901 ctgtgattaa acggtcggct ccagctcttt gaattagatt tgccattaat ttggcggtaa
      961 ttggttctct tgagcgagct tttctgtcct gacgagcata gccataataa ggcataatta
     1021 tattgatgga atgcacggaa gcgcgtttta aggcatctac catgattaaa agttccatta
     1081 gacgttcgtt tacgttggaa ttcattgatt gcacaacata cgcattcgtt ccacggatac
     1141 tttcctcaat attaattttc acttctccat cactgaactt ctggagctcc acctcacata
     1201 aaggtatatc tagataatct gcaatttttg tcgcaagtgg tctctcactc gtcacagaaa
     1261 aaagtttcat tttgcctgcc attgctatct ccttccgccg tactaatttc ttctccttat
     1321 tattatatag aactgtcaat gtgttgtcta ctagctaaaa atcattagtc caaataaaac
     1381 aagcattagc gcaaactaat gcttgtttca ttaaattgca attatagaat acctccgaac
     1441 caatgaagtc cgtaatatac aatccacgta taccactgag tcccaactgc tagagaggtt
     1501 acttctacag cgtctttcgg tatattataa ccaatttgac ctgcaagttc tgtcattaaa
     1561 ggtgccgctg ctcctgatag gtagagggtg ataatgacga taacgatacc tgtgaaaatc
     1621 cctctaaata aattcccttt ggatggaaca atagcaaaaa tcatgtagaa tggaagcgcc
     1681 gttaaatcag ctaaaggtaa tactttattt cctggcaaaa tgaacgctaa aatcaaagta
     1741 atcggaatca tgagtaagcc aagcgaaagc acaaatggat gaccaatccc caccgctgaa
     1801 tctagtccga taaatagttc gcgacctggg aaacgttttt ccatgaattc atgggcagct
     1861 tccgagataa ccgtaagacc gtccattaga agggaaacca tccgcggaat aagtactaaa
     1921 ctagcggcaa tcgttactcc ggtttgcagt acttggctca gcggcatttg agcaatggca
     1981 gcaagtccac caccaataat taagcccata agcatcggtt cgccgaaaat acctaaacgt
     2041 gattgcactt tctctgtgga ccaattaatt tttctaacgc cgggaatttt tccgagtagc
     2101 cagttcattg gataaccaac aagcgcccac ccggtagttt gaatttgtgg taaagaaatc
     2161 ccctctaatc ctaaaacatt ctccacatct ttttgtgtcc agtcagcgat tttgaagata
     2221 attgccatat tgataatcga actaagaatc gcaataatca tgcttcctgt tgttaagtaa
     2281 agtgcactgg cgatgaaaag tggttgccag taattccaaa tatctacgtc cattgttttc
     2341 gtccatttaa aggcaatcat taaaatattg gttgcaataa ttgcgacgaa aacaaatggt
     2401 acgacttctg ttccccatgc gagtgatgac ccaactcccc aaccgatatc cgttgcggtt
     2461 aatttaaaat tataattttc tacaagtgct tttgtaactg gtgtaatagt cgttaacatg
     2521 agtgaagtga taacgcctag tccaacaaac ccaacaccaa ctgttagccc cgctttaaaa
     2581 gctacactaa tttttttgcg gaaaatcaca cctagaatgg taatgataat cggcatcata
     2641 actgttacac caagcccgat aatatattta aagaaatcta gaataatatc cattttgtgc
     2701 cctcccttta atcttgaagt atcgcgagta tttcatcgat tgcttcttgt ttttttaggc
     2761 ctgttaaaaa tgatcttcca atgacaactg gtacatcacc aacatcacct gtaactgttg
     2821 ttgaactaac aataatgtct ggcttagatg tgcttacttt tgacgctact tcttgaaccg
     2881 tacattgact aatttcatat ggaatgcgct tttcgtctag taccgcacgc acttttttgg
     2941 aaataacagt ggaagttgca attccagtcc cacaacaaac ataaattttc ttctttttca
     3001 tcctaaaatc cccctattat tctgggaaaa ataatacttt cccgaaaaat tcatttcttt
     3061 catagattcg ctcaaaaact tctggtcctt cagcaagtga aagacgatgt gtaatcattg
     3121 gttcaatgtt gatttgttta ttagctaaga agtgaatggt tgtttgccat tcttttcctg
     3181 gaaatggtgc agaaattgca ttccatgagc cccaaacagt aagctcactc cgaacaattt
     3241 tttcaaaata gaaacgttcg attgttacat cggcgtatgg aatccctagg aaaacgacgc
     3301 ctccaccttt tttcgcatag gcaaaaactt gggcagatgt aataggtgat ccagcagctt
     3361 ctacaactaa atcagcgttt agaccatctg tatgtgctgc gactacttct aatggatctt
     3421 cttttaaaga attaataacg acgtctgctc ctacttcttt tgcaagagct aactttttat
     3481 cgtctacatc aattgcaata actctttttg cgccaaaaac ttttgcccat tgaattgcta
     3541 gcaaacctat attgccgctt ccgacaacga cgacatcatc gcctgcttgt aatttcgtat
     3601 gataaaaccc atgaacgacc actgcggaag gctcgacaag tgcagcagct tcataatcta
     3661 attcgtctgg tatttttact acattttctg ctggaagttt gatatactca gcataggctc
     3721 cgggatgtct tgctccgatt actgttagct tccgacagcg ggcgaattcg ccttttttac
     3781 agtattcaca ctctccgcaa tagagtgctg ggcatccggc agccctatca ccaatctcaa
     3841 tatctgtaac ctcactacca acctcaatca cttctcctga aaattcatgt ccccacacca
     3901 ttcctggtac atacggacca agtttactgt atctcgaaat atcagatccg caaatcccaa
     3961 ccgttttcac tttcaaaatc acatcatctg gctgttcgat tgttggcata tccgcttctt
     4021 cataacgcaa atctcttttt ccatataatt ttaaagcttt cattctgtta aaactccttt
     4081 cgataacttc tccaaattcg cttcgatatc tccttcaaat aagtaagatc ctacaacgat
     4141 taaatccgcg cctgcaagtg tgcattcttt cgcgagttca gcatttactc cgccatctac
     4201 ttcaatttga ataggacgat ttccaatata tgctttggtt tttctgattt tttctaaact
     4261 tgattggaag aatttttgac cacctaagcc tggatttaca gtcataagca aaatacagtc
     4321 aatatcatct aacacgtatt ccaaagtgct tggtggtgta ccaggattta ataccactcc
     4381 cgcgcgaact ccgtaacttt taattagttg aattgtacga tgcaaatgag ttgttgcttc
     4441 ttggtggact gtaatcatat gtgcgcctgc ttccactaat cttggaatat aacggtctgg
     4501 ttcatacacc atcatatgaa catcaaattg aagcttcgtg ccttttttca tcattttgat
     4561 ttgatctgga ccaaaagcaa tgttcgggac gaacgagcca tccatcatat ccacatgtaa
     4621 taaatcaatg ccatttttct ctagaacctc taactgttca ttaattctgc cgatgtctgc
     4681 tccaaaaaca gacggaacta tttttgccac tattatcacc tcaagattga atttctatga
     4741 ttttttgtaa cttttctttg tcacttagtt ttaatttttg ttgactaaaa tggagtaatt
     4801 tagttgattc tggtgcattt cgggctgatt ttacccaaaa ttcatttcgg cttggcacga
     4861 gaatgtacca cggtagagct tttttctctg tttgccacgc tgcatataat tcgtccagct
     4921 cccacgtttt catttctgct aactgattca tttttttcgg taagtagtat gcgagtgtcc
     4981 acttggcgta taaaatggtg gtggcgtaaa tcattactac gaacatgaaa attaacatat
     5041 tatcttcaat taagttaacg acaaatctac ctggacttcc tattagccag tctacaaaac
     5101 ttgcaaaaaa actccccatc tattcccgac ctcccttaat tattcttaga aaaatgttct
     5161 attgcggaaa gaacatctcc cgtctcttgc gctttaagta aggtcgtcat cacctcctcg
     5221 tcttgaataa gatgaataag tgtttgcagc atatctagtt gttcatcggc actccttagc
     5281 gccatcataa agacaattct gacatcgatt gcttcgttat cagaggccat ttcaataaat
     5341 gaaacgggct tcttgagtat tcgtacagcc accactggcc gaataacatg ttcgctatct
     5401 gtatgcggaa tggcaacccc ggcgtgcgcg gttagtaatc cggttggaaa aactttttcc
     5461 cgtttaatta ctgcatcttt atagcttggc tttactgcgc ccacttcaca caactgttcc
     5521 gccatttctg taagtaattt ttctttatct tgttcgtttg aaaatcgaac catttcttct
     5581 ttaaaatatt ctaatacatc caaattgcat ccctccgact ggctgcttgt ttatttattt
     5641 aataatttgt ttccaacggc accaccagga tggatgacgg aaaactgctc ttttgtataa
     5701 ttcatatagg tcattaagca aacaataact gcatcaaaac ttgcaataac agccattgta
     5761 cttgccgttg ctaacatatt aaacggatct ggttctttgc ttacactcac tgggaaaaag
     5821 atatctgctt ctttggcgat aacggaatct gggttttctg ttacaccaat cagtgtgctt
     5881 ccttttgttt tacaagcagg aattaaatta agtaattcgc ctgtatttcc accttttgaa
     5941 atgagaatca atatatcttc tttttgaagt acaccgagag ttccatgcac agcatctgat
     6001 ggtgttaaaa agactgctgg acgttcgata cagttgaaag agtgtactaa ttttttcgca
     6061 gcgacgccgg atgttccaca accagctacg acaattttcc cagtgcactc ggcgattttt
     6121 tcaaccgttt taacgagagc ctcttcactt gttacttccg gcaaacggga aatcgcgttt
     6181 gcttcttctt gccatgtttg gtgaatatta tctaaaatag cttgtttatc caaaatttat
     6241 tcatcctctc taattactaa ttggttgata gtttgcatga ctttttcttt ggttacattt
     6301 tcgagcaaat cgtctaaaat ttggtgattt tcggctaaat gaacgatttg gtaaagtgct
     6361 tcaatgtgtt gctctttatc cactggtgcg ataactatta cgaaatgaac ttgctctgtt
     6421 tctgaaaaat atacgccatt tttcacgact aaaagagaca tagcgagtcg attcaccccc
     6481 gcattaggca tagcgtgtgg aatggcaata tcttcaccga taataatgta cggatcgtgg
     6541 aacttatggt tatcaatcat ggtctttaca tagtttgctg taattgcttg ttgtagtaac
     6601 agcggctgac ttgctagacg aatcgcttct tgatagtttt taacatcctc acaaatcatg
     6661 atgttatctt cggtgattaa atcatgtaaa tagacttttt tcacgcgttt attttcatct
     6721 gtagctgtgt tagccgacaa aatatcaata attccatctc gtattgcatt cggatccttt
     6781 atatcggcgt tacgttccac tacttccatg attttatcaa tactcgtgag ctggtttccc
     6841 attccaaata aattttgcaa gacgtgttgc cgcagttgcg ttttttcgat atcattcata
     6901 aatggctgaa caacaaagac attttcgcca tcttttaacg gaatggatga aaaaacaata
     6961 tcaacttctg ctttaaaaaa ggcatattcc cgaacagata tagttggata aaaatggatt
     7021 tccgggaata gtttcactaa aatattttcc atgatttttg aaaaagtaac cccgctcgga
     7081 caaagcacaa tcgcacgttt ttgtttatga taaatatcgt tttgcggtat catgtcgctc
     7141 ccaataaaca aagaaatgaa gaaaatttcg ccggctggaa tttcgcgacc aataaatttc
     7201 gcaagtgggt caaatgcttc tttcacaatg aagtttaacg cttcgaattc ttggttgaat
     7261 ttttcataaa gcgtatcttc taaattcatt tggtatttaa tccggtaata ggctggtttt
     7321 aaatgtaaga gtaatttttc gattaagata tgtttgtttt taagagaaac aagtgctttt
     7381 ttctcgaata agtctaagca tgtgaggaca actttttcca agtcttctgt taatttttca
     7441 gttaaaattt cgccggaaaa aatgtttgtt gtaagaagtt gtaatgtgat gaaaagtcgc
     7501 tcttgttctg gaactgggcc agttttttcg agcaaaatat cggtgatgtg gtattctcgc
     7561 gtgtctgaaa gtgatttctc gtcaatatga aaagcagtgt cgattaagcg ccggtctctg
     7621 attcttaaga acatcacgga tagcaaatag ggtaataatt cgatttgctc ataggtgaat
     7681 tttatttgca tcatcgcttc tgcttcttcg agtgtgcggc gaatttccat tagttggact
     7741 ttttcaattc ctgaatacga taggaaatag tgctctcctc ggaacatctc tttcacacta
     7801 cttacaactt gtgtcagaac cttgcgaagt tcccattcac tccctgctaa ctgataaccc
     7861 gatgctctac tataagtgac agttgtttct ttaggaagta atttttgcgc tacttttaaa
     7921 tcacgaagaa tggtgttttt gcttacttga atcttcgttg taaaatgggc gagggatagt
     7981 tcttctttgg ctgttaaaag cattagcaaa attaaattgg cacgttcatt ttcagaaggt
     8041 aagtattcta cgctcggatc tcgagtttct ttctcagaaa atagcgctgt aagctcgggt
     8101 tctaatataa atcggccgtt tttggaacgc tttacttctg gataattttt ccacttgagc
     8161 cattcgttta ctttctgaaa actatagctg atttggtaac gcgataattt atactttact
     8221 tcgagttgtt tatttgtaat gttcggattt tttataactt cttgaaatag tgttttactt
     8281 ctgttatcca gatacatgcg tctccccctt tgatagccta attatagcat agggtttggc
     8341 gcttaagaat gcgctttcat cacaagtttt ctccacacac ttccacaaca tgagaaggag
     8401 attgttactt ttcgtacaat gtagcatctt cgttaaagac acgaattgct tctactgcta
     8461 aaactttgtt ggtcatttgc gaataaattt cataaggaat agttaccgta tctgcgccac
     8521 tttcataagc ttgcattact tgcccgctat gtttaaagct cgctgccata atttgtgttt
     8581 taagtgcctt tttatcaaaa aagtgacgca tcccagcaat ttctttaaaa ggatcgatgt
     8641 tcgctgcgct catcctattc acatatgggg caacaaaatc tgcaccagcc aaggcagccg
     8701 cgattgcttg atcagccgaa taaatagcag tccctaagat ttgaatggtt ttatcctctt
     8761 ttttgagtgt atcaatcaca ttaataccag cctcatgtgc cggaatctta atagctattt
     8821 tttctttccc aaacatcgct agtaacatgc gcgcatctgc caaaatttcc tcatagctaa
     8881 aaccaactgt ttgtacaaaa acttgtttat ccgtaagttc taaaatacga ttaatcgctg
     8941 tttgtcgatt gcatttttct tttactaaaa tggttgggtt cgttgtaatt cctttaaaaa
     9001 tggagctggc ttgaattttt ttcacgtctt ctaaattagc tgaatctaaa tgcattttcc
     9061 ctcacctttc ttggataatt tctctgagtg gcgccaattt ttctgtataa ctacctgcct
     9121 tgtcgttaaa taatgcggct gttccaacga catagacatc tgcgccaatt ggttcaagca
     9181 accgaactgt ttcttcaaaa atattaccgt ctacttcaat taatggttta ttggtgtgac
     9241 tttcaagctc tctttgaagt ttcttgattt tttctaggac atgatgctga aatttttgtc
     9301 cggcgaatcc tgggttaacg gtcatcatta aaaccatatc gactttatct aaaaatggat
     9361 aaatctgttc aatctctgta tccgggctga tggcgatgga cggtttgatt cctagcgcac
     9421 gaatatgctt tatagtcgca tcgacatcag gtgaagcttc tacgtggaaa gacatataag
     9481 ccggctttat cgccgcatac aaatccacaa atttatcagg gttcactgta gctaagtgga
     9541 tatctagtag catatctgta ttgtttttta tatcttgaag gacataggcg cccattgctg
     9601 cattttctac aaaaacacca tccatcacat cacaatggag catttttaca tttgcttgtt
     9661 cgagtgcgcg aagttcgtca gcgagatgaa gcgagtctga acacataatg gaagccgcaa
     9721 tcattttcat ttatcttcct ccggttcctc aagctccgcc aatttcgcga gccttgtatt
     9781 atgtcttcca ccttcaaatt ctgccgcaag ccacgtatca agtaagagta acgccagact
     9841 atcgcccaga acacgttcac caagacaaag aacattacta ttattatgtc gcctcgtcat
     9901 cattgctgaa aaagcatctg aaacaacagc agcacgaaca ccttttattt tgttggctgc
     9961 catagacatt ccaatccctg ttccgcaaca gagcacacct aaactgtttt cggttgcaac
    10021 aaagtgtcct actttagcgg catactctgg aaaatccacg ctttctaatg aataacaacc
    10081 aaaatctttt actgtgtagc cgctttcaat taaatgcgcg cggatttttt ctttcaactg
    10141 aaatccgcca tggtcagctg caattgcaat ttccatgtta tcctctcctt tctcaccttg
    10201 attgtagcac cggccttcct caaactgtta gaactgttcg gcaccatttt tctctactcg
    10261 aatccgcaag atggtaaatt agctctatca acaaaaaaag gctgaaaaag caatgagctc
    10321 tttcaacctt ctatgactta tatcagcctc ttaattcggc ttggatttct tttagttttt
    10381 taggagttac gtcgtctcca agtggatcaa tgattgttac gtgatgtaag ttatcttgaa
    10441 cagttcctcg aatttttttc aaatattctt gacgaagggc agcttgtctt tctttttcaa
    10501 aagcagttaa tccttcactt ttttgttttg cagcaagttc attaatattt tttaataaca
    10561 atttcatgct atccctccta tcattatcta gttactttta ataagtaact aaccaaatta
    10621 taatataaag gtcaacaaaa gtcaaacttc tttttcgagc agtttttcag gatcgcgtac
    10681 ttttgttttt ttgcgttcat aaataagatc cattaatgcg cccgaaccaa gtaggacgcc
    10741 aataataata aaaccgaagc caactagctg ggggatttta attgcttctc caaggaaaag
    10801 taatgcgcca attagtgaaa ataatggatt gaaattcata aaaatagccg agcgtgacgg
    10861 cccaattttc ccaaccgcat aattataaac gaaattgcca aatgccgttg caactacagc
    10921 tgaaacaaca aacaagagcc acagtttcca tgaatgaacc gccactaatt ctgacatgcc
    10981 acccggctcc atgaagcgac ttaaaccaaa caacataacc gaaccaagaa atagcatata
    11041 tccagtcatc agccccgtgt ccattgatcc agcgagcttt ttaataataa taaaactaaa
    11101 tgcctgagaa gccatcgcga taaagatgtc gatatctccc agtgaaatcc cgcttatccc
    11161 cgtcccattt gaaagaacaa ccaaactcac gccaaaaatc cctgctaaaa agccgagcgc
    11221 acgccaagct ccaattcgtt cacggagaaa aaccacagaa aaaatcgcca ccacaatcgg
    11281 cgcagaacca agaataagcc cagcattcgt cccagtcgtc agcttcaacc cgttcgacaa
    11341 gaaaaaatga tgaataacaa tattaaaaat actcgcgaga aaaattaaac caaattccca
    11401 ttttgtaggc agacgtaatt tttttgtgat aaataaaata ataataacgg ttatagctgc
    11461 ggtgaaaatt cgaaaagatg tcatcgtaac agtcggaaaa tagctaacta atactttcgt
    11521 catcgtgaca ttaaaacccc aactcgccat cactgcaatt aataaaaaat aaagtcctat
    11581 cggtgctttc tctttctgca aaacaaacac tcctttttta tagaaaaatg ccccttaaat
    11641 tactttaagg ggcatttcat agcgtcatct tccgcagcct tccacaaagc tataacgcgg
    11701 aaaatggggc agtgatactt aagtcactgc ttgtaggctc atcgcataga cccaactata
    11761 gcatggataa ttttttctgt aaagcgttat tttgtaaatt ctaaccaagt agaggcaatt
    11821 gcttcatgtc ctgctttggt cgggtgcacc ccgtcctcag ctaaaaaggt cggcccatgt
    11881 ttgatagcga gggcgttcat tagcccatca agcggaataa gcgttgcacc aaattctgcc
    11941 gcaagttcgc gcacagctcc aatttttgga tccaaatcac cacgccactc tttccgatct
    12001 tccggatatg gtaatacaaa cggctccatc aaaatgagtt ccgcatttgt ttctgtttta
    12061 atccgattca aaatcacacg atacacttct ttaaacgccg tcaccgaagt atcttcccat
    12121 ctgctaaaac taaaccacgt atcatttatc ccaatcataa tcgtaactac atctggttga
    12181 agtgaaattg catccgcctc aatacgacga tgcaaatccg ccacacggtt cgcactaacg
    12241 ccacgattta taaccgttac atcttcttgc tcaagctggt ctgcaattat tttcacataa
    12301 ccatgtccta attcgcggtc attttcaaaa tctcgccccg catctgtcac actatcacct
    12361 aaaaaaagca acttcttcat ttagttccgt ctcctttaaa attcctgatg ccttattata
    12421 acaaaaaaac ttcaatttag ttgtattcat tttttgcata gcttattttt ttaggagaga
    12481 ttatccaaaa ttacaattgt acagacctcg cgatactacc tatacttaaa agtgttaaaa
    12541 cttattaaaa aaataatcgg aggtaattta tatgactgca aaaataacag aaaaaacgct
    12601 tttcagccct tcttttgaat acgtggataa tggcatcgag catggagtgc taagtccatt
    12661 cgaaacaaaa gaaatcattt tagaaaaagg acaacaaatt gctgaaggtt tcaaaccact
    12721 ggattgttcc attaaaatgt taaaagatgt accagttaag atgcgtgacg gtataaccat
    12781 ttataccgat atttatttac caataacaga agaaaaagtt cctactctta tcgcctggag
    12841 cccttatgga aaaagtgctg gaacagctcc tcgatacaaa aatctattta atatgctagg
    12901 aatggggaat gcctggaatt ctggccttac taaatttgaa gcacctgatc cagcatactg
    12961 gtgcgcacat ggatacgctg tctgtaatcc tgacatgcgt ggcattgctc atagtgaggg
    13021 taatactaca atgattggct ctcaagaagc tgaagatggc tatgatttaa ttgaatggtt
    13081 agctaagcaa tcttggagta atggaaaaac agctctaaca ggaacatctt atttagcctt
    13141 ttcccagtgg tatattgcag ctgagcagcc ccctcaccta acatgtatca atcctactga
    13201 aggattagca gatggttatc gtgacttagc ttttattgga ggcattccag atcctaattt
    13261 tattgagcgt ttgcaaatca accatgtcag tgctaaaaat tcgcaaagag aagatttaac
    13321 aaaggaaatg gaagcatatc ctttagctga tagtgctatt tggaaagaca aagttgcaga
    13381 tccaagtaaa attacaatac cagcttttgt tattgcaagt tattctaata cgcttcacac
    13441 aatgggtaca tttcgttctt ggcgttcact tggttctaaa gaaaaatggc ttcgtattca
    13501 tgatcgccaa gaatggccat attactatga cgaaaataac gtagaagaat tgcgacgctt
    13561 ttttgattat tatttacttg gcaaggaaaa taattggaca gatacaccaa ctgtgcgcta
    13621 tgcattaatt gactttcaag gtggcaatca aactgactta ccatccgaag tttttccacc
    13681 taccaatagt gaaaacaaac gttattatat gaatggccta ttacgtactt tacaagaaac
    13741 acctacttca gatgatttta aagtatccta tactactgaa aacttgccag ggagagcatc
    13801 gttccaaatg acgtttgaca aagaaacgca ttttgttggt tatccaaaag caaaattatt
    13861 tatggaagta gatggatacg atgacttgga tgtttttgtt tggcttcaaa agctagataa
    13921 attcggcaac gtactaagtg aatttgtcgt gccaaatcac ggggctgcac ttcaggattt
    13981 cacacaagaa ggggcatctg ctttacgcta taaaggcgct tggggaagac ttcgcgcatc
    14041 catgcgacaa ctagattctc aagtttcaac agatgaaatt cctgcttata gctttgacaa
    14101 agtagaaaaa ctctcttccg gagaaattgt agaactagac attattttga gtcccattgg
    14161 tctaacttat aaagcaggtg aaacactcag agtagtcgtg agtagcaaag atgaacttgg
    14221 ctcagtaatg ccaggaacgc ccggatgcac acctaataat aaaggtatgc atatccttca
    14281 tacgagtaaa gagcacccat cctatattca gctaccaata atcaacaaat agaaaagctt
    14341 gtcaatggag tctaataact ttatactaaa gctactattt acaatctttc attgaatgga
    14401 gcaattatga agttatccaa tttgaaatac tttgttgatg tggctatgga aggaagtttt
    14461 acccgagcat ctgaaaaatt atttatttca cagcctaccc ttagtagacg aataaaagaa
    14521 ttagaaacag aattaggtgt agaactgttt attaggaatc gtcattcgct ggagttatca
    14581 agtgcaggtc aacaattttt aatagaagta aatgatattt taaatcgagt caacaagcta
    14641 tcccatatgt ttgataatca aaaaacagca gatgaagctg gacaattatt aaagattggt
    14701 tatctctcga atttcaatat gaacgcaatg tatgagctgc tcgaatcatt caagcaaagt
    14761 catccacatg ttcaattctc attaaaaccg gatacaccaa tgaatttagc tgaaggtctt
    14821 tctaatgggc aatatgattt agtttttaat ttatccgctt atttccagcc gaacatgtct
    14881 atagaagaag tattatttat aaaaaatcat ttgcaaattg ctatacccgc ggaccatcga
    14941 ttccggaaaa agaaaaaagt atattttaat gatttgaagc aagaaatagt tattttgctc
    15001 gaaagaaaac agtctcccat cattgtagac tatgttgtta gtcaatgtac taaacatggt
    15061 tttaatttaa aagcgaattc gtatgtaaaa gatctggatg aaggactagc aatgacatct
    15121 gttggagaag gattagcctt tttgtattcc ggcatgaatg atggaacatt agaagataag
    15181 tacaatatta aaattatgga tattcaagaa gaacggaatg accaaaatat tgtcgcagcc
    15241 attaataaac agagcgaaat tacactgctt caagaattat tttcgtttat aaaaagcagt
    15301 ctattaacaa aataattcat tctagataaa aaaagtagca agtttctttt catcaaagaa
    15361 acttgctact tttttagtat ttattaaaat tgtttatgca gtaaatcaag aacgtgacgt
    15421 aactcattaa catcaatttg cccaggagcc gatgcttttt tcgcagcgcc aaatgtcatt
    15481 gcagagccaa atacttcgcc agcaagacgg ctgatgacac cagttccagc cattgacatc
    15541 gtaatgattg gttgattagc tttttcagat acagtattcg ttgcatctag taaagttagt
    15601 acgtctccag cagattttgg catgacggcg attttcggaa ggtccgcgcc aagtgcttcc
    15661 atgcgagtta atcgagaaac gatttcttcc ttcgcaggtg ttttatcaaa atcatgattc
    15721 gacataacta cttttacatt gtttttgtgg gctgtttcga ttaaacgtaa aacatccgct
    15781 tcttcattga aaagttccac gtcaactaaa tcaattttgc cagtgctagc tagtgtttca
    15841 tttaattcaa aataaaattc gtcaccgaca gctaactcgc cgccctcttt tgcactgcgg
    15901 aaagtgaata aaatcggtgt ttctggtaaa attgtgcgaa tttcatctag cgcagcttcc
    15961 actttagcta aatctttgac gtcttcaaaa aagtcaacgc gccattcgac aacgtccaaa
    16021 tcgattgttt gtaacatttc tgcttcttct ttaagcgcag caaccgtttt accgaccatt
    16081 ggtacacaaa tttttggcgc accttcacca aacgtaacat tctttacgac tactttattc
    16141 atgtataatt ctcctcattc gatattatgt cttaagatta gcgataacct tgttcttttg
    16201 caagttttta aaataggatt tctttaatgt aatcaactgg catttctttg tgtgtccaaa
    16261 tttcgaaagc tttcgcacct tgccaaagca tcatgcctaa gccgttaagt gtttgacagc
    16321 cttgttcttc agcgatttca agcaatctag ttttagttgg tttgtagaca acatccgaaa
    16381 cgattaattc tggacgaagc atatcggcac ttggtaaaag tgtttcgcct tcgaaaggtt
    16441 tcatcccaac gccagtcgcg ttcgtgaaaa taacactttc tgcgatttct ttacgtaatt
    16501 gttcgtggtc ttcgatatca aataattgtg ctttacaatc tgttttcgaa ttgatttttt
    16561 ctactgtttt ttctgcattc gcgtaaaaat cgtcttttct gttgaaaata gaaatttctt
    16621 ttacgccgtc aagagcagct tggatacaaa tagctgttgc cgcaccacca gcgccgcaaa
    16681 tcgtcatttt tttgccgata atatcatgtc cagcttcttt taacgcacgc atataaccag
    16741 tgccgtctgt aatgtgtcca gttaacacgc cgtcatcatt aacaactgta tttactgccc
    16801 ctacaagttc agctgctgga gaaagtttat ctaaatattt atggatattt gttttatttg
    16861 gcatggaaac gttccagccg cgtaagttca ttgcgcggaa tccttgtaca acatctttca
    16921 gttctttgtc tccaacttca aaagcaaggt atacataatc aagcccgagt tttgcaaaag
    16981 cttcattatg cattgttggt gataaactgt gtctgattgg agtggcgatt aaaccgatta
    17041 attctgtgtg tcctgtaatt ctttctgtga ttttgtttgt cataataaca tcgttccttt
    17101 ccaaattaag gtttatttgt gaaaatgtga acttatataa agagcgaatg tggcaagacg
    17161 gactccgcct tgccagttcg gattacaaag agccaatttt ttctaatgta gttaaaatat
    17221 ttcttccttc gcgaacgcct tccaagattt ttcttgtcgc agcgctgtcg ccaatattta
    17281 cgatttcaat ttgtttttct tttccgtatg ccgcaagttc ttccataagt gggcgttctg
    17341 gtcgcattcc taggcagaca aagccgtaat caaatggaat ctcggcgtct actccgtcgt
    17401 gcttcacttt gaaatgatcc gctgctactt cggttaatgc agtttctgtt tgcacatcaa
    17461 cattattctt ctcgataatg tccatcatcg aaagacgtgt aatcatatct aagtcttttc
    17521 caagaagtgg catcatttct acaattgtaa catccgagcc gcgttctgag aagtactcga
    17581 ccacatcaag tccaactgca ccaccgccga taactgcaac ttttttgtta ctaaattcgg
    17641 taaagtcatc gatatttgaa ataagtccaa aaatcgaatg aaccttactg ccttctttgt
    17701 caatcacgtc atgcaaacct ttaatcggtg gaagtaatgg tttggatcct gtggcattga
    17761 ctaccacatc aggattaaat gtatcaataa gcgcagtatc agctttagtg cctgtaataa
    17821 cttttaaatt ggttaatttt tctgctcggt tcgctaaata attagggaaa tcggcaattc
    17881 tacttttgtc tggaaggttg gcaatggcac gcgccaagcc accagtttgt tcactcgctt
    17941 caattagcgt tgtgttacag ccaacttcag ccgccgtaca agctgcttca agccctgctg
    18001 ttccgccgcc aattacgaca acattggtcg gacgagtcac ttttgtttct ttgtatttat
    18061 cttcatgaat aatatcagga ttcaccgtac aacggattgg cttcgacttg gaaattcggt
    18121 gatccgcgca accgatatta caagaaatac attttcgaag catgtcttct tggccagttg
    18181 ccactttgtt cacccagtta ggctcagcga ttaagccacg tcccatcgca agcaagtccg
    18241 catatccttc tgacaaaatt ttctctgccg cttttggact gcgaatgtta ccggaagtaa
    18301 tcgttggttt gttaaattta tctttcaccg cttttgcaag gtagcttctc cagccatctt
    18361 ccaagttcat ttggtcaatt tgcaagtata ggttgtcatt tattgccgct gatacattca
    18421 aaatatccgc ttcttcttgg caataatcta gcagttccaa aatatcttct aagtggttgc
    18481 cgccttctgt aaattcatct gcactaaaac gaagtacgat tgggaaaaat ggaccaactt
    18541 ccgcgcggac tttttccaaa attagtttga cgatacgggc gcgattttca ggcgagccac
    18601 caaattcatc cgtacgtttg ttataaagtg gcgataagaa ttggcatagt aagtacgagt
    18661 gtccgccgtg gatttcgact gcatcaaacc cagcttgttg ggcacgtcta gctgcatcac
    18721 catatttatt gacgatttca taaatttctt ctaccgtaag cgggcgcggt acagtaccac
    18781 cttttttaga tggaatatct gacgcggaaa ctggttgaag tccattcaaa cgtgctggat
    18841 aagctgatgc accagcgtgg ttgatttgga tggatacaca agttccatgt ttatgaagac
    18901 gttctgttaa tttgtaaaat ccagggatgt attggtcatt atcgattcga agttgcgttg
    18961 ttccgtttgt cccataagga aaatctacac aagcgttttc aatagtgatt agacctgttc
    19021 caccttttgc gcgttgttcg tagtaattca tatgttcttc taaaaattcg ccatttaatc
    19081 cagctaggtt tgtccccatt ggtggcatta tcacacggtt tttaatggtc attcttttta
    19141 cagttaatgg ttcaaaaata ctcggataat ctgtcataat aagcctcctg cgactataat
    19201 ctcagcaaat gatttgttac attattcacg ttcaataatg cacaatctta tttctctttc
    19261 attataagtc aggaataatt attaatctaa tgtatatttt tcgatttatc catagatttt
    19321 ttctatacaa tcgcttacaa tagagttatc aaggcattcc gaggaggtag tttcatgaat
    19381 ttgcgtcaat tatactattt taaaaaacta gctgaaaaag agcattacac gatcgcagcc
    19441 gccgaactct ccattaccca gcctagctta agccattcta tcgcagaact tgagcgagaa
    19501 cttggtgtct atttatttga aaaacaaggc cgcaatattc gtttaactaa atacggtcgc
    19561 ttttatttaa cttatgtgga aaaatccctc gccgaactag aaaaaggtga aaaactttta
    19621 cacgaattaa cgagcccatc gcacggaaat attgatttag ggtttattta caccatgggc
    19681 gcccatacgg ttccagagct cgtccagaat ttcaccaaag tcgaaagcca taaagacatc
    19741 acattttcct ttttccaagg tgccactaaa tcaattatcc ctgatttaaa aaatgaaaaa
    19801 ttcgacctag cgatttgctc ctacgtcgaa aatgaacctg atattgagtt tttaccatta
    19861 acaaaacaag agttagttgt tgtcgttgcc gaaaaccacc cacttgccaa acatgattcg
    19921 attgatttaa aagacaccgc agattattcg tatattttct tttctgacac cagtgggctg
    19981 agaccgctta ttgattctct ttttgcggaa ataaatattc aacctaaaat cggctgttat
    20041 gtagaggagg ataccgcaat ggttgggctt gtgagtgttg attacggtat ttctatcatg
    20101 ccaaaaatct cctcattagc acactacaat gtcaaagtat tatccatcaa cgaaccaaaa
    20161 cacgatcgtt ttatctatct agcaagtttg aaaaaccact acatttcgcc tgcttccaag
    20221 gcttttaaag atttcgcatt acgttatggt aaaaagcatt tcctataaaa aaaggagcca
    20281 accaaatcgg tggctccttt tctattaaaa ataaatactt cctgcttcag catccgcatt
    20341 aaatcggtat aactcaccaa ctttttctaa ataaggtaaa tactcgatat tctccataaa
    20401 ttctacttca tccggcaaaa tacctggctt cgtgcaacca tctaacgttt ggtaaagtag
    20461 ttcggctgag aaagtttctg gcaagaaatc acgaattgct gttgtcagta aaaactcttc
    20521 cgtaatcgca ctatacgctt ttttaagcat atctaaatgg tcaaaagcaa gtggcagttc
    20581 caaagcttct gtcattgaga ataggccgat atccgccgcg tcatccccag ccgcgcgttt
    20641 ctctaaagct tctggtggca caatcgcata aaatgcccgc gaaataatcc aaccgcgcgg
    20701 atcacgaccc ggtttatcaa ataccccaaa cggaatcaac ggaataccag tcaaacttgt
    20761 ttcttcttct agttcacgcg cggcagcttg gtccgcagat tcattttcat cgacaaatcc
    20821 gcccggaacc gcccattttc cgccttccat atttggtttt ccttctgcgt ttgtaaggct
    20881 tcgtttaatt aataaaatat gtaatgttgg tttcccgttc aactctttta ctgtagttaa
    20941 aatcatatcg ctcgtatagc catctggtgt acgaaactct tttgcattat aatttttcag
    21001 cgcatcttct ttgttcacaa attcttctgt catgtcaaaa tcagactcct ttttgtgtat
    21061 ttagctcttt ccattatagt atcacaaaaa aaagaatttg ttccaatcac tggaacaaat
    21121 cctcttattt ttcgagaatt gtgcgacctt tataagtgcc gtctggtgag atgcggtgtg
    21181 acatacggta ttcgcctgtt tcactatcgc gactcaaacc tggtgttgtt aagcctttat
    21241 gcgtacggcg cttgtttttc ttcgctttgg acgtacgtct agctggaact gccatattgc
    21301 tcgcctcctt atttcttaca cttgtatcat tgtaacgcta atcacacgaa acatcaatct
    21361 tacaaatcgg ctaaattctt cacccattca ttcaaaggac gacgcggttt tgcttctggc
    21421 acttccgcta agctagttaa atgcaaggtt ccaacaattt tttgctcaga agggatacct
    21481 aaatcttccg caaacttcgc atcaaaaata aatctattcg accgccaaat catcccaatt
    21541 cccgcttccc agccaagtaa ttggatattt tggataaatg cactagttgc cccgattgat
    21601 tcgaaatcct ttttcccgtg accgataata ttcgtcgtca caatgagtaa gtatggcggc
    21661 gtaataattt tcttcgcata gcctgctttt aaatccgcaa tctctgcttc agaaaaacta
    21721 accccttgtt cgcgctcatt aaattcgatg attttctcga tgtatcgctc tttttcagca
    21781 agtgtatgca gcacgtatac attccacggc tctactttgc tatgaaaagg cgcataggca
    21841 gcttgctcta aaatggtgtt caccgtttct cttgaaattg gcgcgtcgtt cgctttctta
    21901 atgctacgac gttccttaat tgttttttca atcatgttta attccccctt aaatgataaa
    21961 cgttatcatt tagagaatta tagcatgatt ggtttgtggg ttgctagtaa aggggctttt
    22021 ggggtttagc atatgtgttt attttgttca gatgattctc tatagaccaa aacctgtttt
    22081 ctaattctat ggctgattca taatatgttt tttcaaataa aaccatttat ttcccgcttt
    22141 ctatctcacc atatttctta gaaaataact ataattcaat atgatagtga gaacataata
    22201 tccaaccgtt taacccatat gaagcttgta actcataata atttaatttt ttctcgttta
    22261 aataatttag tagttcgtcc tcactttcat aatctagtgg ccaaaaatag tttttgcctt
    22321 cagaaagtaa aattgacttc tcacttataa agctgctaac ctctcctttt actatgtcta
    22381 aaatgatact attagacatt tggtgttcaa agcagaaagt taaaagcccc tcaaatatga
    22441 ctttatattt tctgttttct tcatccttaa caaacatgat taattgagaa ttctcaaaat
    22501 ctgcatgata agacaatatt tcgctatcat gaactgtatt tttcataatt aacactcctt
    22561 atttagatgg ctttcttggc ggttttctat cccaatccca ctcatgtcta tgtggaaatt
    22621 cgtgagttcc gtcgtctgaa tggttaaaat ctatatcttc tttagctctg cccttttcat
    22681 cataatatct tctttgtttt acacttccat caggatttaa caaatcagcc gaggaactgg
    22741 gcatagcttt tcccggaaga ctttgtttgt tttccacgat gatgtgttta ggcattttac
    22801 tacctttttt aacaatttct tcatagtcaa ttctgctagt tttcttaatc ctttctataa
    22861 ccgttttatc agcttgtctc aattttatca atgtattttt cgatattgtc agtttcttcc
    22921 cttgataccc tttcgtcgtg tagccaaaaa caagtgaggt taaaatccca aaactttgag
    22981 ctttgcttat ttcttgacca gttatcggat ctttattttg cttcagtgat tctagtgtgg
    23041 cttttaacaa ctcgccttct tcagtggctt gcttactttc ttttggtagc tcaccgttaa
    23101 aactggctgt attataagcc tccgttgctt taatatccac tttcccatct tttgaaagaa
    23161 tccacataac gccttgtttt actttgctat aactcgcaaa attatagact gtcgtatcag
    23221 tggcactcgc ttttcctagc gtttttcgca ttcggttcac agtggcaaaa tttaatttac
    23281 ttaaatcata gctgcccgtt tgactatcaa actggatatt tgattgtaac tctcgaacag
    23341 tttgctggat accttgcact aaatccgtca aatggtcgaa aaaagcccca tgactttgtt
    23401 caaaagccag atatttctct aaaatatttt cttgcttata tgcggttgct aactgggaac
    23461 gataggtttg catttggcct tctgtactgc tgttcattcg ttggtacagt gcttcttttt
    23521 tgctttcaat gcggtcaatc atttggccga gttcatataa accatctgca tcaattttag
    23581 cattaggaga aaggtctact tggtcgtgaa agtcttggat ataccgcttc aacctttcct
    23641 cactctcatt cattgcctcg attatcgtgt cgcagagtgg aatgtatgtc atttgaaagt
    23701 aatttttgga cgcttccacg gccttccctt ttaaactacc atcttctacg tagtttgtca
    23761 cggtggtttt gacgccttgg atgatttttc ttcctgtttg gttggctgcg cgtagttgga
    23821 atgcaaaatc ttgtatttct ccgatgtcga ttcggctcac tggaacaact ccttttgtat
    23881 atcttgttgt ttactttcca attggtagat gtttttttgg tatgtattta ttttttcttg
    23941 gcgtttttct tcctcagctt gaaaggtttg gcaccattta tttttctcgt ctgcttggag
    24001 gtcttctaaa tagtagccga aattgcgagc ttgatcgcct tgccagactt ctctcatcaa
    24061 ctccaaagac tcgcgttctt cgtaacaaat ccgctcaaaa tcttcttcta gccaaattcg
    24121 ctcattttgt tcatgtttga gcatatataa ggataattcc gcatcttttt gttgtttttg
    24181 gagagtttgt agttgttgtt tcaatttctc gttgtttgaa tccacttaaa tccatccctg
    24241 cttttttatt cttaatatac cgcataagat ataaaaattc aataattatc tgaaaattcg
    24301 agcgcgcaaa aaaacaagcc atctacctcg aaacggcttg ttcattcact tcttattttt
    24361 caacaatcac agggttttgc acgtgaacca cttcaaaacg agcgattgca tttcctacga
    24421 tgcctttgcg gtcttctctt tgttctctag tgtcttttgt tctgccgtgt gcttttttga
    24481 aggaatcgct tttcacccaa ttgcgttggg cttcttcact ttcccatttg cttgttacga
    24541 ctacttcttc atagtctttg tcttctggtt tgctgtgcca tagttcgaag cctaggaaac
    24601 cttctacttc tgcgatatct tttgttggat gtccgtcgcc atttgcgcct gtgaactgac
    24661 ggataacgtg ctctgctgcg cctttttcta ccttaatcgt attagttaca ataatcattc
    24721 ttaaatcccc cttggataat tgtattgtat gtataatagg ctggttcctt ccattatatt
    24781 gataatgatt ctcaatgtca attttaggga atgggcttgg agtgggattt aaaaagaaca
    24841 aatttcacaa tcaatgaaat ttgttcttta gtttgctatt ctttttcaac caccggaatc
    24901 caaacctccg aataataatc agcggcagtt gtgtcacctt ctgtgtagac ttctagttct
    24961 ggagcgtttc cgtgcgcgta gttgcttgtt tggaaccatt cgccgtaaat gtattcccac
    25021 actttttgga ttgcgcttgg tagtgggccg actgatttga agatggccca tttacttgct
    25081 gggatgatta gtttttccat gtctgctggt ggagtgagtt cggattcaat cgcgatataa
    25141 tagtccattt tgtcgccgtt cattttacaa acgcctaaaa taccatcaat tgttgcaaat
    25201 tcagctaact cgttgattcg ttcggcatca ccatttgtgt ttgcttcttg ccaaaattgg
    25261 ctgatttttt ctttttgcgc atcgttttca accgaaaaag ttcgtttttt ccccacagct
    25321 gtaaaagcat ttcgttcgac aatttctact tccatgattt ttgtcctcct tcaattgctt
    25381 tcggtacttt aagtataaac aaaaactatc caatctccaa atggaaacca gatagtttga
    25441 attattattc ttccgctgct gcttgttttt gtttcatccg ttcgcgcacg ccaactcgtt
    25501 tgatttgttt actacgaagt tgcccacacg cggcatcaat atccgtcccg tgttcgcggc
    25561 gaataacaca attaatacca tttttcttca atgtatcata gaaagcgagt acgtcttctt
    25621 ttgtgctacg ttcataatcg atatgctcat ccaccgggtt gtaaggaatc aagttaacat
    25681 aagctaaatg gcgatgttct ccgagaagtg ccgccagttc gagcgcttct tttttgtggt
    25741 cgtttacacc ttttagcata atgtattcaa acgtgattcg gcggttagtt ttgttaacgt
    25801 aataatggat tgcttccatc aatttctcaa ttgaataggt cttgttaata cgcataatac
    25861 tcgtccgcag ttcattgttc ggcgcatgga gggaaatcgc taagttaact tggaaatcct
    25921 cattggcaaa atcaataatg cgcggtgcaa gaccacttgt cgaaacagtg atatggcgcg
    25981 cgccgattgc gaggcctttg tcatgattaa tcacacgcaa gaaatccatc acattatcgt
    26041 aattatcaaa cggttccccg attcccatta caaccacgtg actcacgcgt tcttccaaat
    26101 tacgtccatc caaataatgc tgcacattca taatttgttc cacaatttcg ccagcggtta
    26161 agtcgcgact ttttttcaaa agcccactcg cacaaaaagt acagccgata ttacaaccaa
    26221 cttgagtcgt tacacaaacc gacaagccat attcttgctt catcatcacg gtttcaatta
    26281 agttcccgtc actcagctta aataaatatt tcgttgtgcc gtctgtcgat tcttgtacca
    26341 cttgttcttc taaagtgttc atcacaaaat tcgctgttaa aagttcaatt gtttcttttg
    26401 gaacgttact catttcttca aaagttttga cacgttttct ataaagccag tcccacactt
    26461 gtgttgcgcg gaatttcttt tgaccgtgtg cttctagcca ttctgttaat tttgtccatg
    26521 ttaatccata aatggagctt ttttccattg ttcagcctct tttcaggtct tgttttcgtc
    26581 tataaagatt atagctgttt tatggttcac aagcaatgct atttcgtaaa tatcagccgt
    26641 ttgtcctgtc tcgcacaaaa aaagtagcta ttctgtcaca aatagctact ttctcacttt
    26701 atctaaacat ggtttgggtt gctttcgcta gcacttttgg atcacgatta tgtggtgtta
    26761 ctgggcagat ttttttgtca atatcaagta acgtatacac ggcgattcta gcagcacgaa
    26821 cggaatattc ttcggtgaaa accatatctt ttggaatttc cacaaattgg ctaatcatcg
    26881 caaagtttgt actaccttct ggaacaacgg ccggacgatc actcattgcc cgtggttcaa
    26941 attgcgcatc gatgtatggc atgtagcacg gaattacatt gataatatcc gctttaattt
    27001 cttcaaaatc gtcttgccag ttcaaatgac acattaattc atataaaatt tcttccccgg
    27061 tacattcttt catcggtttt ttcacgaaat cacccacgcg gtctggatat aatccgtaac
    27121 cccagaaaat cgtagtgttt gcatcttgcg ctttaaaatg aggttgtgcg gcaacaacag
    27181 tactcattaa ccaattagag tctttgaaag tcatgagcgc accacttcct ggaatgttcc
    27241 ctgtgaagcg ttcaatgcgt tttaataatt tatcaccatg acaagtgacg gtaaaacttt
    27301 gccagtttgt ttcttcttca tgagcgaaga atggctctgg attgcctaaa tttggtttct
    27361 tttgagcgac tttgtaccaa agctcaccag aaattggttt ttcttcaggt tttggtgccg
    27421 gtgtattcat atcaccaaga gtcgcgctat ctgtcataca agcattcgtc ataatcacat
    27481 catcatctgg gccaagtttg atagtggatc catccgataa atgaagtgct gtcgctgtaa
    27541 ttccaggcgc atctttgaaa tcaatatctt ccaccgtttg attaattgta aaatcaacat
    27601 ggtgtttatc taaaaatgtt tttaaaggta aaatcaagct ttcgtattgg tttagagggg
    27661 ttcttgttac accttccagc gtatcaatcc gactaaattc taacatcatc cgattcatat
    27721 aacgtctaaa ttcaaacaag ctgctccatt tttggaaagc aaaagtggtt tgccacataa
    27781 accaaaaatt cgtttcaaaa aagtgttcgt caaaccaatc acgtatcgtt aaattatcca
    27841 gtttttcttc cggagtagcg agcagtttcg tcatcaacat ccggtcatta ttattaaatc
    27901 ccatcgaatg cgcatcgagg atattgcgat ctttatcaac taatctcgct tgcgcatggg
    27961 ttggatgtaa atggtcaaaa ttcaaaatct cttctgtaac actaaagttc ggcatatcaa
    28021 gagacggaat actactaaat aaatcccaga aattttcata agtttcttca ttcaacatcc
    28081 gaccaccgcg acaaacaaag ccatgttcca cgcttccggc tccatcatta cttccgccta
    28141 aaatatgcat accttcaata atatgaatat ttttcccatc aaaattggca tcccgaatta
    28201 aataaacagc gcccgccaaa ctagcaatcc cgccaccgac gaaatacact tgtttgtcac
    28261 cataatagcg cgccttaatt gcttcatcca ctgcccgttc tttttcagcg gccttctgtt
    28321 cagaaatttt ctttgcggca atacctgttc caattgcagc cccagttaga gcgactagcg
    28381 tacgtttttt atttttcatc actatctcct ccaatttctt gatacagata gtataccgct
    28441 tgtcgttcgc ttttaatctg ggcaaaagaa cgcttatgtc tggtttttag acaaattagc
    28501 catattgtct agttttcgcg gtacatgctg tttgctaaaa attccgtatc ctttgcaagt
    28561 cgaaatagct ggttcgcaat catttccggt gcctctttga aaccgcgcgt aatccattta
    28621 atcagtactc ccgagcagcc gtaagaaaag aattccgcat aaaatactcg gtctgcctcg
    28681 ttcacggctc cattcgtatc aattttctca aataaatcca taaacagcga attcgttaat
    28741 ttagaaaagc aaaaagaaag gatactcgca tccgccgaaa ccgtgttttt atataaatca
    28801 gcattttctt taatcgattc cagcattttc agtacatgct tatcccaatt ttcaagcgta
    28861 atcccatccg ccaaacaatg gaaaaagtca ttttcatacg tccaagtaag caaatcgtat
    28921 ttatctgtaa aatgatagta aaaagtttgc cgattaagtc cacaaatatt cgtaatatcc
    28981 gcaatactaa tcttttcaaa ccgcttgtgc tgacaaagct ccatcagccc accagcaatc
    29041 gcttttttag taatgagtga ttccgccatg gcatccgccc cgtttcgttt gtttgggtta
    29101 attgtatctc aggtggggtt ggaattgcta gggaaagcat gggagatgtt ggtgctttat
    29161 tatctccttg aatgaaaatg acagatttta gttgaactaa tccaaagttt tttgtcttct
    29221 cgactagctc tcgtgcatta aggtgtctca agttatttag taaattcact ttgggacctt
    29281 agccggcttg atcattcgat tggcgtgatg cttttttgtt ttaatcattt tgctcttgta
    29341 gtggtggatg cttcacttga tcgtcctctt gactcgagcc atctttaaaa acaaggacat
    29401 aaatatgatg cggaaactcg tatctttcat catagctata ttcatacttt agatttggat
    29461 catctttaaa aactatcttt gtaagataac cac
//
LOCUS       DASDYK010000026        29032 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.026, whole genome shotgun sequence.
ACCESSION   DASDYK010000026 DASDYK010000000
VERSION     DASDYK010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 29032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29032
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.026"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            131..898
                     /gene="recO"
                     /locus_tag="U0308_001139"
     CDS             131..898
                     /gene="recO"
                     /locus_tag="U0308_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEM2316108.1"
                     /translation="MEKCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSR
                     LAAVTQLFTNGYFTFFGSNGLGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATE
                     ERQPNPYLYELTFQILRDINEGYDPQILTQIFEMKMLPVLGLYPTMDKCAICGETTGH
                     FDFSTSSNGIICHRCFEKDRYRMHLPENVVKLLRLFFIFQLDRLGNIDVKPETKEWLQ
                     KAIDTYYDEYSGLYLKSRKFLREMDKWENMLKKDSDD"
     misc_binding    939..1112
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            1180..2070
                     /gene="glyQ"
                     /locus_tag="U0308_001140"
     CDS             1180..2070
                     /gene="glyQ"
                     /locus_tag="U0308_001140"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEM2316109.1"
                     /translation="MNLQTMIRTLQDYWSEQGCIMLQSYDVEKGAGTMSPYTFLKAIG
                     PEPWKAGYVEPSRRPADGRYGENPNRLFQHHQFQVVMKPSPDNIQELYLGSLEKLGIN
                     PLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGLECFPVTSEITYG
                     VERLASYIQDKENVFDLEWTEGISYRDIFFQAEFENSTYAFETSNTDMLLTLFDTYER
                     EATRQMQDGLVFPAYDYVLKCSHTFNLLDARGVVSVTERAQYIGRIRNLARRIAKTFY
                     ESREKLGFPLVKEEGGKRHE"
     gene            2063..4129
                     /locus_tag="U0308_001141"
     CDS             2063..4129
                     /locus_tag="U0308_001141"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEM2316110.1"
                     /translation="MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEI
                     KTYSTPRRLTVLVEEMAEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPE
                     DLTFREIKGVEYIYIKKEVIGEKTTALLPSLEKVVTSMTFPVSMHWGSNDLRYIRPIK
                     WLIAMFGEEIIPFEITGVSTSNTSRGHRFLGKTATINQPSDYPNALLEQFVVVNASER
                     KQAIVEQLRELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITT
                     MKEHQRYFPVFSQEGELLPHFVTVRNGNHENLDTVARGNEKVLRARLSDADFFYQEDL
                     KITIDEAVAKLQNIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQDIIRLTNIY
                     KFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLPQTDLGSL
                     IAIADKLETLIGFFCVNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEVVSRIVD
                     MERAEGATELPSSDVIKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNMIPQLIDR
                     AQILNKHADAEWFRPTIEALTRVVNISKKYEDGVEVDPSLFENEYEQALFDKLEKLKF
                     DFAGLKIVDRLKAFADLRTTIDAYFDNTLVMTDNDELKNNRLALLFELASFIKEFAQM
                     DEINVK"
     gene            4164..4988
                     /locus_tag="U0308_001142"
     CDS             4164..4988
                     /locus_tag="U0308_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HEM2316111.1"
                     /translation="MTQPAVYVVSDSTGETAELVTRAALSQFGQTPKFIHRFHHVDSS
                     HMIEEIVDLVAVNNGIIVHTIVLESVREELNKTAQAFGVPIIDLFGPLLNQLEETYKI
                     KPLSEPGRVRSMDEAYFNKVAAIEFAVENDDGRNPRGILQADYVLIGISRTSKTPLSQ
                     YLALKGLKIVNIPIVPEAQIPDELFEIDPKKIIGLKISKQKLTKIRQERLISIGLPGA
                     GTYASNQRIDEELAIFNKLASKLNCFVLDVTNKAIEETANEILIHIGEIVDENLEL"
     gene            5176..5616
                     /locus_tag="U0308_001143"
     CDS             5176..5616
                     /locus_tag="U0308_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HEM2316112.1"
                     /translation="MPKILVDADACPVKAEIKQVAEHFQLDVIFVASFNHYSVNTNGE
                     NWIFVDTGKESADMRMMNLAKKGDIIVTQDIGLASILLAKGTFVFSNRGELYREEEMS
                     LMLDIRYRHAKDRQQGKYSKGPKAMSDQDRSLFKDRLTTFLQNK"
     gene            5636..7516
                     /locus_tag="U0308_001144"
     CDS             5636..7516
                     /locus_tag="U0308_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEM2316113.1"
                     /translation="MARIPEEVIDQVRNQADIVDIIGNYVQLKKQGRNYSGLCPFHGE
                     KTPSFSVSPEKQMFHCFGCGKGGNVFSFLMEHDGLNFVESVKKVADMSHLDVAIKLPE
                     ERDTSNLPKETSETAKMVEMHQLTAKLYHYILMETEEGTAALTYLKERGMSEQMMTTF
                     QIGFAPNHHATITAFLEKRGMDLQLAGRAGLLSERDDGQMVDRFRNRIMFPITNDRGQ
                     IIAFSGRLFDRDDGPKYLNSPETPVFNKRRILFHFSEARQAIRKQEEITLMEGFMDVI
                     SAEEAGVQNAVASMGTSLTEEHADLIKRLTNRAIICYDGDRAGIEAAYKAGTLLVERN
                     RLDVFVLQLPAGKDPDDFIRASGPEKFKEVYKQQRMTWTAFKIHYLRRERNLQNETDQ
                     IGYIDDCLREIAKLDQAVERELYLKQLADEFELTIETLKQQLQQSLKNSQKSRQMASY
                     NEPPIDDSFMGMMPQEETEMLFSFEQPTQKLSAHTTSEQQLMKAMMESRDNFLLIKQL
                     LGDTTFYHDNYKALYTYLIGYFAEGNDADPTKFMDSVPDATMKGLISSLEMVISPDEQ
                     GKTQFEDYIRSLKRFKLEQKKKELEQELATLNRENDKDNEIRVMLEIVQLNRQLNSGQ
                     LD"
     gene            7611..8735
                     /gene="rpoD"
                     /locus_tag="U0308_001145"
     CDS             7611..8735
                     /gene="rpoD"
                     /locus_tag="U0308_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEM2316114.1"
                     /translation="MSDKTKNTKPVAELSVEQVKEALIEEGKKKGILTYAKIAARLAP
                     FTLDSDQMDEYLEHVGEAGIEVSDDADDEDPDETELVKEETESFDLTDMSVPPGVKIN
                     DPVRMYLKEIGRVDLLTADEEIALAKRIEAGDIEAKGRLAEANLRLVVSIAKRYVGRG
                     MLFLDLIQEGNMGLMKAVEKFDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHM
                     VETINKLIRVQRSLLQDLGRDPSPEEIGEEMDLPTEKVREILKIAQEPVSLETPIGEE
                     DDSHLGDFIEDQDATSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRT
                     LEEVGRVFGVTRERIRQIEAKALRKLRHPSRSKQLKDFLE"
     gene            8803..9507
                     /locus_tag="U0308_001146"
     CDS             8803..9507
                     /locus_tag="U0308_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenine-N(1))-methyltransferase"
                     /protein_id="HEM2316115.1"
                     /translation="MNEEQLSKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTAS
                     FAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGGTLI
                     RTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLA
                     PSEKPVTWTKQEIFFGPCLLKEQSAIFKSKWRHEANTWQNIIQTISNNQPVSTENQAK
                     IRELEHKIALVEDVLK"
     gene            9504..10625
                     /locus_tag="U0308_001147"
     CDS             9504..10625
                     /locus_tag="U0308_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEM2316116.1"
                     /translation="MKVANGYEYTAIMEKIAPKKLAMEGDPIGLQVGDLSRKVRKIMF
                     TLDVLEEVVDEAIEKKVDLIIAHHPFLYRPTQHIDTTTKQGKMIKKLIKHDITVFAAH
                     TNLDIAQGGVNDILADLLHLQETTMIEETYSEPYCKIAVYVPENELESIRLALVNNGA
                     GQIGTEYTECTFHTTGIGSFKPGANANPTIGEKEALTSVPEVKIEAIFPQYLTHTITK
                     AVKIAHPYEEPAIDVYTLEMQTYKEGLGRVGMLPKKLGMVSFIDKLKTAFAIDNVRFI
                     GDLKTTVHKVAIIGGDGNKFIHQAKATGADVFITGDVYYHTGHDLLAINLPTIDAGHN
                     IEKVMKGYLKNKMEEQAKILDYEAEFIVSEVNTDPFQFC"
     gene            complement(10671..11666)
                     /locus_tag="U0308_001148"
     CDS             complement(10671..11666)
                     /locus_tag="U0308_001148"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEM2316117.1"
                     /translation="MEIIKISPRGYCYGVIDAMVIAKNASLDPNLPRPIHILGMIVHN
                     KHVTDAFESIGIYTVDGANREEILDKITTGTVIFTAHGVSPSVKAKAAAKGLTTIDAS
                     CPDVLHTYNLILEKQAAGYEIIYIGKKGHPEPEGAYGTAPDVVHLVETKADIDALSLL
                     SDNIFVTNQTTMSKWDVADLMDYIKEKFPKAIQHQEICMATQVRQEAVAVQAKGADLT
                     IVVGDPRSNNTARLAQVSIEKAGTKAYRIADITELDIEWIKDAKKVAVTAGASTPTQL
                     VREVLLFLEQFDAADKTTWKRAHNKDFERILPKMKNKYMAEKRRQRLAHLKNGGS"
     gene            11812..13119
                     /gene="cshB"
                     /locus_tag="U0308_001149"
     CDS             11812..13119
                     /gene="cshB"
                     /locus_tag="U0308_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD-box ATP-dependent RNA helicase CshB"
                     /protein_id="HEM2316118.1"
                     /translation="MTKKSRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGES
                     IIGQSQTGTGKTHTFILPIINNVNPEKEAVQAVITAPSRELATQIYNEIRKVTKYSEK
                     EIAVQLVIGGTDKQRAIDKLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADM
                     TLDMGFLNDVDHIAGKMPANLQMLVFSATIPQKLKPFLSKYMENPRYEHIQPKVAASK
                     TVEHRIMATRSRNKLDLLKNVLVGSQPYLAIVFTNTKTTADEVANGLIERGLKVAKIH
                     GDVNPRERKRTMKQIENLDYQYVVATDLAARGIDIQGISHVVNYELPDDLDFYIHRTG
                     RTGRAGHSGIALTLFEPADEDRLNQLEKMGIEFKHVDWKNKEFVTLEDRNRRAKREAK
                     RETADPREIGMRKKAKQKGKPNYKKKINYKMNEIKRRERRKKR"
     gene            13135..14028
                     /locus_tag="U0308_001150"
     CDS             13135..14028
                     /locus_tag="U0308_001150"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HEM2316119.1"
                     /translation="MLRLGSHVSMSGKKMLLGASEEAASYGSNTFMIYTGAPQNTRRK
                     PIEELNIEAGLEHMKAHDMADIVVHAPYIINIGNSVKPETFELGVNFLQSEIERTRAL
                     GAKQIVLHPGAHVGEGADKGIKQIIQGLNEALIHDQDVQIALETMAGKGSECGRTFEE
                     IAQIIDGVTHNELLSVTFDTCHTHDAGYDIVNDFDGVLNEFDKIIGVDRLKVLHINDS
                     KNERGAHKDRHANIGFGHIGFDALHYIVHHPQLADVPKILETPYVGEDKASKKAPYKW
                     EIAMLRNGEFDPDLLNKIQNS"
     gene            14045..14971
                     /locus_tag="U0308_001151"
     CDS             14045..14971
                     /locus_tag="U0308_001151"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-dependent inorganic pyrophosphatase"
                     /protein_id="HEM2316120.1"
                     /translation="MTKTLVFGHKNPDTDTICSAISYAELKKAQGADIEAVRLGELNS
                     ETAFVLDYFQVTAPRLVQTVANEVSEVALVDHNERQQSVDDIDDVTVTAVVDHHRIAN
                     FETSDPLYYRAEPVGCTTTILLKMFRENEVEVSKTVAGLMLSAIISDTLLFQSPTCTQ
                     EDKVAAQKLAQIADVDIQSYGMEMLKAGADVSKKTVAELLLDAKEFNMNDNKVEIAQI
                     NVVDVNDVLSRRAEVEALMTQNIVDKGLDLYLFVITNILTNDSVGIAIGSKTAVVEEA
                     YGVKFVENQAPLKGVVSRKKQVVPILTDTFAK"
     gene            15116..15889
                     /gene="zurA"
                     /locus_tag="U0308_001152"
     CDS             15116..15889
                     /gene="zurA"
                     /locus_tag="U0308_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZurA"
                     /protein_id="HEM2316121.1"
                     /translation="MNKIIEVNNVSYHYDKEHALENIHFQVAKGSFTGLIGPNGSGKS
                     TMLKLILGVLKKQQGSISLFGEKQADFKDWVKIGFVSQKSNAFNSAFPATVKEVVASG
                     LTKKKGLFKTLNNKDKEDIDYALKRVEMTDYLHRNIGELSGGQQQRVFIARALVSRPE
                     LLILDEPTVGVDVENVKAFYELLAELNRTEEMTLLLVTHDLMAVNTYVNHVISINKRI
                     IFDGSAHEYQHYLADRELEILAEQRRREDACLDCDASPV"
     gene            15864..16742
                     /gene="zurM"
                     /locus_tag="U0308_001153"
     CDS             15864..16742
                     /gene="zurM"
                     /locus_tag="U0308_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease ZurM"
                     /protein_id="HEM2316122.1"
                     /translation="MIATLLQYDFIRNTFIVGLVIGIVAPLLGSFIVVRKLSLMADAL
                     SHVTLGGIAVSLFLSKTYLPLAALNPLYLGFGFSVVGSLLMEKLRNVYKHFEELAIPI
                     IMSAGMGFSVIFISLANGFNTDLFSYLFGSVSAVSRTDMITIVVTAIIVFIVILSLYK
                     ELFLLSFDEEYAKVSGLKAKVFDVIFMVLVALVIASSMRIVGILLVSSLMTLPVAAAI
                     RIAKGFKQTILLSILFGEIAVIGGLFTAYYLNLAPGGAIVIISVLLLIVTILYQKIRQ
                     KILISKRGEENGTYSN"
     gene            16723..17148
                     /gene="zurR"
                     /locus_tag="U0308_001154"
     CDS             16723..17148
                     /gene="zurR"
                     /locus_tag="U0308_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ZurR"
                     /protein_id="HEM2316123.1"
                     /translation="MGLTATEALMKMKEKGYKHTDKREFLINLLARKNKYLTAKDVLE
                     NMKDDFPGISFDTIYRNLSLFVELGIFEETDLSGERNFRLACTHEHHHHHFICMKCGK
                     TKEIMMCPMDFLTEALPGYQIDGHKFEVYGECPECLQAS"
     gene            17283..18167
                     /locus_tag="U0308_001155"
     CDS             17283..18167
                     /locus_tag="U0308_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEM2316124.1"
                     /translation="MTKLKKVMISVIAATLLLLAGCGSSAVVKTDAGSVTQDELYEAM
                     KTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSF
                     KENLEYNLLVQKATEANMNVSESKLKTYYKTWEPDITVRHILVDDEATAKEIQTKLKN
                     GEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYG
                     YHLIQLVKKTEKGTYAKEKANVKAAYIESQLTTENMIAALKKELKAANIDIKDSDLKD
                     AFADYTSTSSTSSTTTSN"
     gene            complement(18249..18575)
                     /locus_tag="U0308_001156"
     CDS             complement(18249..18575)
                     /locus_tag="U0308_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HEM2316125.1"
                     /translation="MALSSYTLFVIVGCGLVTFIPRVLPFIFVRKLQLPDVVIRYLSY
                     VPLCILTALFVQSLLITRENGFPGINIENLLASLPTILTAILTKNLMWIVIIGIISMA
                     MIRLFA"
     gene            complement(18566..19273)
                     /locus_tag="U0308_001157"
     CDS             complement(18566..19273)
                     /locus_tag="U0308_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEM2316126.1"
                     /translation="MEKENELSFYDGVRACLPTVLGYAGIGIAAGVVGKASHLSLLEV
                     TLLAIIVYAGAAQFIISGLLLLQSPISAIIFTTFLINSRHFLMSMAEAPHFKKYSLWN
                     NIGIGALLTDETFGVSMNQIGNKKPVSAKWMHGINVTAYLAWIVACIVGAFIGNWLPN
                     PEQFGLDFALSAMFIGLLYLQVVSDKSKKISTSLFVMILVAVFLILFMRVMTPELAIL
                     TATLLGCLMGVIIERWR"
     gene            complement(19309..20415)
                     /gene="ispG"
                     /locus_tag="U0308_001158"
                     /gene_synonym="gcpE"
     CDS             complement(19309..20415)
                     /gene="ispG"
                     /locus_tag="U0308_001158"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEM2316127.1"
                     /translation="MNERIFREKTRPVQVGNLTIGGSEELTIQSMTTTKTHDVEATVA
                     EIHRLEEVGCQIVRVACPDERAANALSAIKKRIHIPLVADIHFDYRLALKAIDAGVDK
                     IRINPGNIGRRDRVEKVVNASKAKNIPIRIGVNAGSLEKKIIQKYGYPTAEGMVESAL
                     AHIKILEDLDFYDIIVSLKASDVNLAIEAYDKASRAFNYPLHLGITESGTQFAGGIKS
                     AAGLGAILSLGIGNTLRVSLSADPVEEIKVAREVLKSFGLSSNAAMLISCPTCGRIEI
                     DLIRIANEVENYIATIKAPIKVAVLGCAVNGPGEAREADIGIAGSNGEGLLFRHGKII
                     RKVPEAIMVEELKKEIDILAEEYFEKKTDLESLR"
     gene            complement(20527..21327)
                     /locus_tag="U0308_001159"
     CDS             complement(20527..21327)
                     /locus_tag="U0308_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1189 domain-containing protein"
                     /protein_id="HEM2316128.1"
                     /translation="MNIFKRFWKSLYSPADIASFRNDKIRKSIVYIIVLSFVTFLPLA
                     YFTNITTKNALKVGEETITNEIPDFKVTDGKLVLTDKNAKNIPISIDQDELHIYFDAS
                     GTLDKDDVDNKIASYDSAVAFLSDSIYITAAGVSQSVSYDTAGISDKSDLVHLYNSIE
                     SLAKYFIPIALLVLFIFTLGSVFFRVALYALFGFILSGFGRTGIAFRQNWMIASYSIT
                     LAAVFTMIMEALQIIVPFGMEINMVVSMIFVFLAIRSIPPSDPTILEK"
     gene            21629..22237
                     /locus_tag="U0308_001160"
     CDS             21629..22237
                     /locus_tag="U0308_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEM2316129.1"
                     /translation="MTYELPKLPYTYDALEPNFDKETMEIHYTKHHNTYVTKLNEAVA
                     GHPELASKSVEELVANLDSVPEDIRGAVRNHGGGHANHTLFWSILSPNGGGAPTGNLK
                     AAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNDGKLEIVSTANQDSPLSDGKTPV
                     LGLDVWEHAYYLKFQNRRPEYIDTFWNVINWDEANKRFDAAK"
     gene            22367..24532
                     /locus_tag="U0308_001161"
     CDS             22367..24532
                     /locus_tag="U0308_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEM2316130.1"
                     /translation="MKLNFRKKKKDSTKKKRAIIPLRLNILFFIIFILFSVLILRLGI
                     VQIVQGDTYKRQLEETDNVTVSKNVPRGSIYDRNYNLLVGNSAVKSITYTRSQQTQTA
                     ETLHVAQTLEKLITVEPEKLTDRDLKDYWILTHQTESLNRLSAKEQALDSSKAYKIQV
                     DKVTKEDIASLTSEDLKVATIYKKMTTGYAMTESVVKNKDVTDEEIARVSENMDSLPG
                     VDTTTDWNRYYTYDETLRSILGSVSTAKEGLPKDKAEYYLSQGYSRNDRVGKSYLEAQ
                     YESVLAGSKSQSESVLDSKGNIIETVNKYEGSKGKDLVLSVDVEFQKAVEEILKKNIK
                     QGKQYAGSDLFDRAFVVAMDPYSGEVLALAGQKLNDKGEFEDYSLGTFTTAYAMGSAV
                     KGSTILGGIMDGAITNKTVFTDQPIVLKGTKPKSSWFNRTGAGNRPLDPVGALEISSN
                     SYMYQVAMKMGGANYVPNGPLRAPLSTFDDMRYYYNQFGLGVKTGIDLPGEQTGYKGD
                     DQTIGKILDFAIGQYDSYTPLQMAQYVSTIANGGSRIAPSMVKEIRNPSTNGDSVGTL
                     ATANEPKVLNKIGVSESDIKTVQQGFYEVTHGSTGTARTVFTSSDYDVAGKTGTADAF
                     YDGPKEGNKMASVWNTTFVGYAPVEKPEIAISVVVPWIYRPYGTDQKTNMKISKEVFD
                     KYFELKKERSESKKDTSKVEQPINNKEAAAKAQSEQTEN"
     gene            24730..25773
                     /locus_tag="U0308_001162"
     CDS             24730..25773
                     /locus_tag="U0308_001162"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEM2316131.1"
                     /translation="MTKSYHVAVVGATGAVGTQMIELLEEAATFKIKQVSFLSSIRSA
                     GKKLSFRGEEVTIQEATPESFEGVDIALFSAGGSVSKALAKEAVKRGAIVIDNTSAYR
                     MDPTVPLVVPEVNEKALFSHKGIIANPNCSTIQMVAALEPIREAFGLNRIIVSTYQAV
                     SGSGVSAIQELKDGSRAVLDNKEFTPQIMPVKGDKKHYPIAFNALPQIDVFTENDYTY
                     EEMKMINETKKIMEDNTIKVSATCVRIPVVSGHSESVYIEVDKEGITAKEIQNELKNA
                     PGIVLEDDPANQVYPQAVQAAGKKEVFVGRIRADIDDPKGFHMWIVSDNLLKGAAWNS
                     IQIAESLVKLAII"
     gene            25785..26996
                     /gene="dapG"
                     /locus_tag="U0308_001163"
     CDS             25785..26996
                     /gene="dapG"
                     /locus_tag="U0308_001163"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEM2316132.1"
                     /translation="MKIIVQKFGGTSVQNEKSRLMAFNHIKQVLKEGYKVVVVVSAIG
                     RYGDPYATDTLLELIGAKNTKLTAREQDTLLSVGETISASVFTNMLKEANIKAEAFSG
                     GQAGIITSDDHLNAKITEVDTARLKDALTNLDVAVVAGFQGITANGDISTLGRGGSDT
                     SAAALGVSLQADYIDIFTDVDGMMTADPRIVEHARSLPRVSYNEVSNMAYQGAKVIHP
                     RAVEIAMTAKIPMRIRSTYLESTGTLVTSLTNDSDHFDVKERIVTGVAHVTNLTQISV
                     QTDTVKAQQLAFEILADAGISLDFINISTNSVIFTVPEEKSHVVKQLLEDADLQTTVR
                     QACAKVSIVGAGITGVPGVTAKIVGALSEKNIPILQSADSHTTIWVLVKEEDLISAVN
                     ALHDVFCLEIK"
     gene            27011..27892
                     /gene="dapA"
                     /locus_tag="U0308_001164"
     CDS             27011..27892
                     /gene="dapA"
                     /locus_tag="U0308_001164"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEM2316133.1"
                     /translation="MDLGKVITAMVTPIHPEKDKVCKKRIHHLVNHLIKNGSDGLVIA
                     GTTGESPTLSHDEKIKLFRQVIETNDGRAKLIAGTGSNNTAETIAFTKEVAELGGIDA
                     VLIVAPYYNKPNQDGLYAHFAAVSEASDLPVVIYNIPGRSVVNIEPETIIRLAKLPNI
                     VGVKESSGNLDNISKIIAETSDDFQVYSGDDSLTLPILAVGGNGVISVASHVVGNEMQ
                     EMIQAFERGEVQKAAQIHRELLPLMNGLFSVPNPAPTKYLLNQQGISVGPVRLPLVDL
                     NAEQGTKLQAILEGLSK"
     gene            27912..>29032
                     /locus_tag="U0308_001165"
     CDS             27912..>29032
                     /locus_tag="U0308_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEM2316134.1"
                     /translation="MTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPE
                     NELLGIDIVIPDFKYLEENKDRVKAVFLTHGHEDAIGALPYLLQKIKAPVYGTELTIA
                     LAKSALKEHRKLRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIV
                     YTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRH
                     AFRMADGRIIVACVASNLIRLQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIE
                     EDLIVPLKELKKYSDDEITIIETGNLGEPIQSLQLMTKGNHPQFNIKPGDTVYITTTP
                     SPSLETMMAKTMDMLYKAGAKVLTMSNNLFISGHASQED"
BASE COUNT         9959 a         5191 c         5623 g         8259 t
ORIGIN      
        1 aaatcctctc tgacttaccg ttttctctat tttacaatag gcatccgtgg aaagatagca
       61 aaaaatataa aaagacataa tcattaagaa aatgttataa taagacgtgt aaaaaaggga
      121 ggcttaccac atggagaaat gcgaaggaat cgtgatacgg caaacgagtt accgtgaatc
      181 agataaaatt gtccgaatgt atacacgtga atttgggaag attggtgtgg tggctcgtgg
      241 ggcaaaaaaa acgaaaagca gattagctgc agtaactcaa ttatttacga atggttattt
      301 tactttcttt ggtagcaatg gccttggtac gcttcagcaa ggggaagtca tagaaaattt
      361 ttcttctatt cagcaagata tttttatgac tgcttatgcg acttatgttt gcgaattgct
      421 tgataaagcc actgaagaac gccaaccgaa tccatatcta tatgaattaa cttttcaaat
      481 tttgcgagat ataaatgaag gatatgatcc gcaaattctc actcaaattt ttgaaatgaa
      541 aatgttaccg gtgcttggtc tttacccaac aatggataag tgcgccattt gtggtgaaac
      601 aacaggtcat tttgattttt caacaagtag taatggcatt atctgtcatc gttgctttga
      661 gaaagaccgt tacagaatgc atttgccaga aaatgtcgta aaattgctgc gtttgttttt
      721 catcttccaa ttagatagac taggaaacat cgatgtgaag ccagaaacga aagaatggct
      781 tcaaaaagca attgatacat actacgatga atactctggt ttgtatttaa aaagcaggaa
      841 atttttgcgc gaaatggaca aatgggaaaa tatgttaaaa aaagatagcg atgattgact
      901 ttttagcaaa aatacagtat cttttaatat atcaactaat aggtacgttg aaggaaaata
      961 gtaacaaaaa gctctatttt tagcgagtcc gggtttggtg tgagccggat atttaacttt
     1021 ttgtgaaggc gttctggagt acagcgaaat caaggtggga attgttttaa ttccaaatag
     1081 ggtggaaccg cgagctaact ctcgtcccta tatgctttaa atcagcatat agggacgaga
     1141 gtttttatat tggctgaatt atttttggag gtggaagcaa tgaatttaca aacaatgatt
     1201 agaacattac aagattattg gtccgaacaa ggttgtatta tgttgcaatc gtatgatgtg
     1261 gaaaaaggtg ctggcacaat gagtccgtat actttcttaa aagcaattgg tccagagccg
     1321 tggaaagcgg gttacgtaga gccgtcgcgt cgtcctgctg atggtcgtta cggagaaaat
     1381 ccaaacagat tattccaaca tcaccaattt caagtagtga tgaagccttc tcctgacaat
     1441 attcaagagc tttacctagg ttctttagaa aaattaggta tcaatccgtt agaacatgat
     1501 atccgttttg tagaggataa ctgggagaat ccatctcttg gttgtgcggg ccttggttgg
     1561 gaagtatggt tagatggaat ggaaatcaca caattcactt atttccaaca agtaggtggc
     1621 ttagaatgtt tccctgttac ttccgaaatc acttacggtg tggaacgttt agcaagctat
     1681 attcaagata aagagaatgt atttgattta gaatggacag aaggtattag ctaccgtgat
     1741 attttcttcc aagcagaatt cgaaaactcg acatatgctt ttgaaacttc gaatacagat
     1801 atgctgttga cactttttga cacatatgaa agagaagcca ctcgccaaat gcaagacggc
     1861 cttgttttcc cagcatatga ttacgtattg aaatgttcgc atacgtttaa cttactagat
     1921 gctcgcggcg ttgtttcagt aactgaacgc gcacagtata tcggtcgtat cagaaactta
     1981 gcaagacgta tcgccaaaac attttatgaa tcacgagaaa aacttggctt cccattagtc
     2041 aaagaagagg gaggaaaacg tcatgagtaa agacttttta ttagaaattg gtttagaaga
     2101 aatgccagca aaatatgtga ctagctctgt actacaactg gaaaaacgag taactgattg
     2161 gttaaaagac aaccaaatcg aatttaaaga aattaaaact tattctacac caagacgttt
     2221 aactgtccta gtagaagaaa tggctgaaga acaagctaat cgtgtggaag aagcaaaagg
     2281 ccctgcaaaa aaaatcgctc tagacgacga aggcaactgg tcaaaagcag cattagggtt
     2341 tgcaaaaagt caaaaagttg cgccagaaga tttaactttc cgcgaaatta aaggtgttga
     2401 atatatttat attaaaaaag aagtaatcgg cgaaaaaaca acggcgttac ttccaagctt
     2461 agaaaaagta gtaacaagta tgactttccc agtaagtatg cactggggta gtaatgattt
     2521 acgttatatt cgtccaatca aatggcttat cgcaatgttt ggcgaagaaa ttattccatt
     2581 tgaaatcact ggtgtctcaa ctagtaatac atcccgtgga catcgtttct taggaaaaac
     2641 agctacaatc aaccaaccga gcgactatcc aaatgcatta ttagaacaat ttgtcgttgt
     2701 taatgctagt gaacgcaaac aggctattgt agaacaatta cgtgaactag aaacgatgga
     2761 aaattggcaa atcagagaag atgacgactt attagaagaa gtaactaatc ttgtcgaata
     2821 tccaactgta ctagcaggta attttgaaaa agaatatctg gaactacccg aagaagtttt
     2881 aattacgacg atgaaagaac accaacgtta cttcccagtt ttcagccaag aaggagaatt
     2941 gttgcctcat tttgtaaccg ttcgtaatgg taaccatgaa aatctagata cagtggcacg
     3001 aggaaacgaa aaagtactac gcgctcgttt gtcagatgct gatttcttct atcaagaaga
     3061 tttaaaaata accattgatg aagcagttgc taaattacaa aatatcgttt tccatgaaaa
     3121 attaggcact ttgacagaaa aaatgaaacg agtgcaaaaa gtggcattaa tgcttgctga
     3181 ttatttaaat tggcaagaag aagataaaca agacattatc cgcttaacaa atatttataa
     3241 atttgattta gtaaccaata tcgttggtga attccctgaa ctacaaggtt taatgggcga
     3301 aaaatatgca ttgttgcaag gcgaaaaacc agcaatcgca acagctattc gtgaacatta
     3361 tttaccaagc tcagcagaag gcgatttacc acaaacagac ttaggttcac ttatcgctat
     3421 tgcagataaa ttagaaacat taattggctt cttctgtgta aatattgcac caacaggctc
     3481 tgctgatcca tttggtttac gtcgtagtgc ttttggagcg gtgcgtatta tccaagcaaa
     3541 tggttgggac attccaatgc ttgaagtggt ttctcgtatt gtggatatgg agcgtgcaga
     3601 aggggctaca gaactaccaa gttcagatgt aataaaagaa gtgcagactt tcctaaaaaa
     3661 tcgtttgcgt gttattttac aaggccatca tattcgccat gatattattg acgctgttat
     3721 cggcggcgat cctaatatga ttcctcaatt gattgatcgt gctcaaatat tgaataagca
     3781 tgcggacgca gagtggttcc gcccaactat cgaagcctta acacgagtag ttaatatttc
     3841 taaaaaatac gaagatggcg tagaagtgga tccgagccta tttgaaaatg aatacgagca
     3901 agccctattt gataaattag aaaaactaaa atttgatttt gctggtttaa aaattgttga
     3961 cagactaaaa gcatttgcag atttacgtac aacaattgat gcatatttcg ataacacgct
     4021 agttatgact gataatgatg aattgaaaaa taatcgtctt gcactattat tcgaacttgc
     4081 aagctttatt aaagagtttg ctcaaatgga tgaaattaat gtaaaataaa aggaagattt
     4141 tgagcaaaga ggaggaagta tgtatgactc aaccagccgt atacgtggtt tccgattcaa
     4201 caggagaaac ggccgaacta gtgacaagag cagcactaag tcaatttggt caaacaccga
     4261 aatttatcca tcgttttcac cacgtcgatt cttctcatat gattgaagaa attgttgact
     4321 tagtggcagt gaacaatggc ataatcgtgc acaccattgt actcgaaagc gtccgtgaag
     4381 agcttaataa aactgctcaa gctttcggcg taccgataat tgacttattt gggccgcttt
     4441 taaatcagtt agaagaaacc tacaaaatca aaccactttc tgaacctggc cgcgttcgtt
     4501 ctatggatga agcttatttc aataaagtag ccgcaatcga atttgccgta gagaatgacg
     4561 acggccgtaa tccaagaggt attttacaag cggattatgt tttaatcggt atttcaagaa
     4621 cttcaaaaac tcctttatcg caatatttgg cgcttaaagg attaaaaatc gtcaatattc
     4681 caatcgttcc agaagcacaa atcccagatg aactttttga aattgaccct aaaaaaataa
     4741 ttggtctaaa aattagtaaa caaaaattaa cgaagattag acaagagcgt ttaatatcga
     4801 ttggtttacc tggtgctggt acttatgcaa gtaatcaacg aattgatgaa gaattagcga
     4861 tttttaataa actagccagt aaattaaatt gtttcgtgtt agacgtgact aataaagcca
     4921 ttgaagagac tgcaaacgag attttaatcc atattggtga aattgttgat gaaaatttag
     4981 aattataaga aggactttta ctttttatgg cgaatatata tattatacgg ggaaaactgc
     5041 ttgtaaaaat tagttacttc ccgtataatc taaattcgcg tgtgaaaaag ccaaatctac
     5101 gaataatatt aaaaaaacgg gttaaaaact cgttttttaa cttgccttca tagattttaa
     5161 gagaggatgg aatatgtgcc aaaaatttta gttgatgccg atgcttgccc ggtaaaagca
     5221 gaaataaaac aagtcgccga acattttcag ttagacgtta tttttgtggc ttcttttaac
     5281 cattactctg taaatacaaa cggagaaaat tggatttttg tggatactgg aaaagaatca
     5341 gcggatatgc gaatgatgaa tttagccaaa aaaggcgata ttatcgtaac acaagatatt
     5401 ggcctagcta gtattctact tgcaaagggt acatttgtct tttctaatcg cggcgaactt
     5461 taccgagaag aagaaatgtc attaatgtta gatattcgct atagacatgc caaggacagg
     5521 caacaaggta aatatagcaa aggtccaaaa gcaatgagcg atcaagatcg ttctcttttc
     5581 aaagaccgat tgacgacatt tttgcaaaat aagtaaatag gagttgactg tcaaaatggc
     5641 gcggattcct gaagaagtaa ttgatcaagt ccggaatcaa gcggatatag tcgatattat
     5701 cggtaattat gttcagttaa aaaaacaagg acgtaattat tctggcttat gtcctttcca
     5761 cggtgaaaaa acgccatcct tttctgtctc accagaaaaa cagatgttcc attgttttgg
     5821 ttgtggtaag ggagggaatg ttttttcttt tctaatggag catgacggac tcaattttgt
     5881 tgaatcggta aaaaaagtgg cagacatgag tcatttagat gtggctatca agctccctga
     5941 agaacgagat acaagtaatt tgccaaaaga aacttctgaa acagcaaaaa tggtggaaat
     6001 gcaccagctt actgccaaac tttaccatta tattttaatg gaaactgaag aaggtacagc
     6061 agcattaact tatttaaaag agcgtggtat gtctgaacag atgatgacca ctttccaaat
     6121 tggttttgcc cctaatcacc atgcaacaat tactgctttt ctagaaaaac gtggcatgga
     6181 tttacaatta gctggcaggg ctggactttt gtccgaacgt gatgatgggc aaatggtgga
     6241 tcgttttcgt aatcggatta tgtttccaat tacgaatgat cgtggacaaa ttattgcctt
     6301 ttctggccgc ttatttgatc gtgatgatgg tcctaagtat ttaaatagcc ctgaaacacc
     6361 tgttttcaat aaaagacgaa tattgtttca tttttcagaa gcaagacaag ctattagaaa
     6421 acaagaagaa attacgctca tggaaggatt tatggatgtt atttccgcag aagaagcagg
     6481 tgttcaaaat gcggtagctt cgatggggac aagcttaacg gaagaacatg cagatttaat
     6541 taaacggctt actaaccggg cgattatttg ttatgacggt gacagagccg gaattgaagc
     6601 agcctataag gcgggcacac ttctagttga acggaatcgt ttagatgttt ttgttttgca
     6661 acttccagct ggaaaagatc ccgatgactt tattcgagca agtggtccag aaaaattcaa
     6721 agaagtttat aagcaacaac gaatgacttg gacagctttt aaaattcatt atttacgtag
     6781 agaacgtaat ttacagaatg agacagatca aattggttat attgatgatt gtttacgcga
     6841 aattgcgaaa ctagatcaag ccgtcgaacg cgaattatac ttaaaacaac tagcagatga
     6901 atttgaatta acgatagaaa cattaaaaca acaactacag caatcactaa aaaatagtca
     6961 gaaatcacga caaatggcta gttataatga accaccaata gatgattctt ttatgggaat
     7021 gatgcctcaa gaagaaacag aaatgctatt ttctttcgag caaccaaccc aaaaactatc
     7081 tgcccataca acctcagagc aacaactcat gaaagcaatg atggagagcc gagataattt
     7141 tcttttaatt aagcaacttc ttggtgacac tacgttttat catgataatt acaaagcgct
     7201 ttatacctat ctaattggtt attttgcaga aggtaatgat gcagatccaa cgaaatttat
     7261 ggatagtgtt cctgatgcta caatgaaagg acttatcagt agcctcgaaa tggttattag
     7321 tcccgacgaa caagggaaaa cccagtttga agactatatt agaagtctaa agcggtttaa
     7381 attagaacaa aagaaaaaag aacttgagca agagctagcg actttaaatc gtgaaaatga
     7441 caaagataac gaaattcgtg tcatgctcga aatcgtccaa ctcaaccgtc agttaaacag
     7501 cggccaattg gattaataac gttttaaaac cgctaaatga tggtattatt acctaagaga
     7561 agccttttaa taaggttagc ggcattttgg aaggaggaat acaggcagtt atgagtgata
     7621 aaacaaaaaa cacaaaacca gttgctgaac taagtgttga gcaagtaaaa gaagccctga
     7681 tagaagaagg taagaaaaag gggattttaa cttatgcaaa aatcgctgcc agattagctc
     7741 cattcacttt ggattccgat caaatggatg agtatttaga acatgttggt gaagcaggaa
     7801 ttgaagtttc tgacgatgca gatgatgagg atccggatga aacagaactt gtaaaagaag
     7861 aaaccgaatc ctttgattta acagatatga gtgtaccacc aggcgtaaaa attaatgacc
     7921 ctgttcgcat gtatctgaaa gaaattggtc gagtagactt acttacagcg gatgaagaaa
     7981 ttgccttagc aaaacgtatc gaagctggcg acattgaagc caaaggacgt cttgcagaag
     8041 ccaacctgcg ccttgttgta agtattgcaa aacgttatgt tggtcgcggt atgttattcc
     8101 ttgatttaat tcaagaaggt aacatgggac taatgaaagc cgttgagaaa ttcgacttca
     8161 ataaaggatt taaattcagt acctatgcaa cgtggtggat tcgtcaagcg ataacccgtg
     8221 cgattgcgga ccaagctaga acaatccgta ttccggtgca tatggttgaa acaatcaaca
     8281 aactaatccg tgtacaacgc tccttattac aagatttagg ccgcgatcct tcaccagaag
     8341 aaattggtga agaaatggac ttaccaactg aaaaagttcg ggaaatcctt aaaatcgcac
     8401 aagagccagt ttcccttgaa acaccaattg gtgaagaaga cgattcacat ctaggcgatt
     8461 ttatcgaaga ccaagatgca acttcaccat ccgatcacgc agcatacgaa ttactaaaag
     8521 aacaattaga agatgtgctt gatacattaa ctgaccgtga agaaaatgta cttcgcttac
     8581 gttttggtct agatgatggt cgtacgcgca ctttagaaga agttggtcgt gtatttggtg
     8641 taactcgtga acggattcgt caaattgaag ccaaagcttt acgtaaatta cgtcatccga
     8701 gccgtagcaa acaactaaaa gacttcctgg aataaagcac aaccgggcag gaggacaaac
     8761 cgttctcctg cctttttaat gaaaatgaaa gtagggaacc aaatgaacga agagcaatta
     8821 tcgaagcgac tcgaaaaagt ggcttcttac ataacaaaaa atgaacgaat cgcagacatc
     8881 ggaagcgatc atgcttattt accttgtttt gcagttaaaa atcaaacggc ttcgttcgct
     8941 attgctggcg aagtagttga tggacctttt caatctgcac aaaaacaagt tcgttcttct
     9001 ggcttaacag aacaaattga cgttagaaaa gggaacggtt tagctgttat cgaaaaaaag
     9061 gatgcgattg atacaattgt gattgcaggc atgggtggca cgttgatacg tactatttta
     9121 gaggaaggtg cagcaaaatt agccggtgta accaaactaa ttttacaacc taatattgca
     9181 gcctggcaat taagagagtg gtccgaacaa aacaattggc ttattacttc tgaagcaatt
     9241 ttacgcgaag ataataaagt ttatgaaatc atggtgttag ctccgtctga aaaaccagtt
     9301 acttggacta agcaagaaat atttttcgga ccatgcttat taaaagaaca aagcgccatt
     9361 ttcaaaagca agtggcgcca tgaagcaaat acatggcaaa atattattca gactatttct
     9421 aacaaccaac cagtttcaac agaaaaccaa gcgaaaattc gtgaattaga acataaaatc
     9481 gcattagtag aggatgtgct aaaatgaaag tcgcaaatgg ctatgaatac acagcaataa
     9541 tggaaaaaat cgcacccaaa aaacttgcaa tggaaggcga tcctattggt ttgcaagtag
     9601 gagatttatc gagaaaagta agaaaaatca tgtttacctt agatgtattg gaagaagttg
     9661 ttgatgaagc tattgagaaa aaagttgatt taattattgc tcaccatccg tttctatatc
     9721 ggccaacgca acatatcgat acgacaacta aacaaggaaa aatgattaaa aaattaatca
     9781 aacatgatat tactgtattt gccgcacaca caaacctaga tattgctcaa ggtggtgtaa
     9841 acgatatttt agcagattta ctccatttac aagaaacaac gatgattgag gaaacctatt
     9901 cagaaccata ttgcaaaatt gctgtttatg ttccagagaa tgaattagaa agcattcgtt
     9961 tagctcttgt aaataatggt gccggacaaa tagggacaga atatacagaa tgcacattcc
    10021 acacgaccgg gattggttct ttcaaaccag gagcaaacgc taacccaact atcggcgaaa
    10081 aagaagcact gacttctgtt cctgaagtta aaatagaagc tatattccca cagtatttaa
    10141 cccatactat cactaaagca gttaaaattg ctcatccata tgaagaacct gcgattgatg
    10201 tatatacgct tgaaatgcag acttataaag aaggattagg tcgcgttgga atgcttccaa
    10261 aaaaactcgg catggtttca tttattgata aattaaaaac tgctttcgct attgataatg
    10321 tccgttttat tggggattta aaaacaacag tccataaagt agcaatcatt ggtggcgatg
    10381 gaaataaatt tatccatcaa gcaaaagcca ctggtgcaga tgtttttatt accggtgatg
    10441 tttattatca cacgggacat gatttattag ctattaatct tccaactatt gatgctggcc
    10501 ataatatcga aaaagtgatg aaaggctatc ttaaaaataa aatggaagaa caagcaaaaa
    10561 ttttggatta tgaagcagaa tttattgtat cagaagtaaa tacagatcca ttccaatttt
    10621 gttgataaaa aaaccgagta actcccttaa ataaaggagt tgctcggttt ttagcttccg
    10681 ccatttttta agtgagctag ccgttgacgt cttttttcag ccatgtactt attcttcatt
    10741 ttgggaagaa tacgctcaaa gtccttatta tgcgcacgtt tccaagtagt tttatctgcc
    10801 gcatcaaact gctccaaaaa caatagcact tcacgaacaa gttgtgttgg cgtacttgct
    10861 ccggctgtaa ctgctacttt ttttgcgtct ttgatccact ctatatctaa ttccgtaata
    10921 tcggcaattc ggtacgcctt tgtgccagct ttctctatcg aaacttgggc taaacgagca
    10981 gtattattac ttctaggatc gccgacaaca atagttagat cagcaccttt ggcttgtact
    11041 gcaacagctt cttgccgcac ttgagtggcc atacatattt cttgatgttg aatagctttc
    11101 gggaattttt cttttatata atccattaaa tcagcgacat cccatttgct catcgttgtt
    11161 tggttcgtca caaaaatgtt atcggaaagt aatgaaagag catcaatgtc tgcttttgtt
    11221 tctactaggt gaacaacatc aggcgctgtt ccgtatgcgc cttctggttc aggatgtcct
    11281 ttttttccta tataaataat ttcatagcca gccgcttgtt tttctaaaat taaattatag
    11341 gtatgaagta catctgggca ggatgcgtcg attgtcgtta agccttttgc tgctgccttc
    11401 gctttgacag aaggagagac accatgtgcg gtaaatataa ccgttccagt ggttatttta
    11461 tctaaaattt cttctcgatt agcgccatct actgtataaa taccaatgga ttcaaatgca
    11521 tcagtaacat gtttattatg aacaatcata cctaaaatat gaattggtcg aggcaagttc
    11581 ggatcaagtg atgcattttt agcaatcacc atcgcatcga tgactccgta gcaataacca
    11641 cgaggagata ttttgataat ttccattcga aaacatcctc atttctgttt tagattcttt
    11701 atttagtata atagacttag cctgttttga caaagttgtc ttaacacgcg cacgaatgtc
    11761 caattatgtg ctataatggc tactaggtat agaacggagt ggaaatattt tatgacgaag
    11821 aaatcaaggt ttgaccaatt tggctttcaa ccttttattg gacttgcaat agataaatta
    11881 ggattctatg agccaacaga agtacaacag aagctaattc caggcatttt aaaaggggaa
    11941 agtatcattg gccaatctca aacaggtaca gggaaaaccc atacttttat tttgccaatt
    12001 attaacaatg tgaatcctga aaaagaggca gtacaagcag ttattacggc accaagtcgt
    12061 gagcttgcta ctcaaattta taatgaaatt cgcaaagtaa ccaaatacag tgaaaaagaa
    12121 atcgctgtac aacttgttat tggtggcaca gacaaacaac gtgcgattga taaactgaaa
    12181 aagcaaccac aaatcattgt cggaacgcct ggtcgtatca atgacttaat tcgtgagcaa
    12241 gcgttatttg ttcatacagc gaaaacgctc gttattgacg aagcagatat gacacttgat
    12301 atgggcttct taaacgatgt cgaccatatt gctggaaaaa tgccggctaa tttacaaatg
    12361 cttgtttttt ccgctacaat tccgcaaaaa ttaaaaccat ttttaagcaa atatatggaa
    12421 aatccacgtt atgagcatat tcagccaaaa gtggctgctt caaaaacagt ggaacatcgc
    12481 attatggcca ctcgtagccg taataaactt gatttactta aaaatgtttt agttggttca
    12541 cagccttatt tagcgattgt ttttacaaat acaaaaacaa cagctgatga agtagcaaac
    12601 ggtttaatcg aacgtgggct aaaagtagcg aaaatccatg gtgatgtaaa ccctcgtgaa
    12661 cgtaaacgga cgatgaaaca aatcgaaaac ttagattatc aatatgttgt tgcgacagat
    12721 ttagctgctc gtggtattga tattcaagga attagtcatg tcgtgaacta tgagttgccc
    12781 gatgacttag atttctacat tcaccgtact ggtcgtactg gtcgtgccgg acattctggt
    12841 attgcactta cattatttga accagctgat gaagaccgct taaaccaatt agaaaaaatg
    12901 ggaatcgaat ttaagcacgt tgactggaaa aataaagaat ttgttacact tgaagaccgc
    12961 aaccgccgtg ccaaacgtga agcgaaacgc gaaacagctg accctcgtga aatcggtatg
    13021 cgtaaaaaag caaaacaaaa aggtaaacca aactataaaa agaaaattaa ctacaaaatg
    13081 aacgaaatca aacgtcgtga aagacggaaa aaacgataag tgaggaatga atttatgcta
    13141 agattaggtt ctcatgtatc aatgagtggt aagaaaatgc ttcttggcgc aagtgaagag
    13201 gcagcttctt atggctcaaa tacgtttatg atttatactg gcgctccgca aaacacgcgt
    13261 agaaagccaa ttgaagaatt gaatattgaa gccggcttag aacacatgaa agcacatgat
    13321 atggctgaca tcgtcgttca cgcgccgtat atcatcaata ttggcaattc agtgaagcca
    13381 gaaacctttg aactaggtgt taatttcttg caatctgaaa ttgaacgtac gcgtgcgctt
    13441 ggtgccaagc aaatcgtact tcatcctggc gctcatgttg gtgaaggggc agacaaaggg
    13501 attaaacaaa ttatccaagg tcttaacgaa gcattaatac atgatcaaga tgtacaaatt
    13561 gctttagaaa caatggctgg aaaaggttct gaatgcggac gtacttttga agaaattgct
    13621 caaattattg atggcgtaac gcataatgaa ttattatccg ttactttcga tacttgtcac
    13681 acacatgatg ctggttacga tattgtaaat gattttgacg gggtgttaaa tgaattcgat
    13741 aaaattatcg gtgttgatcg cttaaaagtg ttacatatca atgatagcaa gaacgaacgt
    13801 ggtgcacata aagaccgaca cgctaacatt ggtttcggtc acattggctt tgacgcactt
    13861 cattatattg tgcatcatcc gcaattagcg gacgtcccga aaatccttga aacaccttat
    13921 gttggtgaag ataaggcatc gaaaaaagca ccatataaat gggaaatcgc gatgttaaga
    13981 aatggcgaat ttgacccaga tttattaaat aaaatccaaa atagttaaaa aggagacgaa
    14041 aataatgaca aaaacacttg tattcggtca taaaaatcca gatacagata cgatttgttc
    14101 tgccattagt tacgcagaat taaaaaaagc acaaggagca gatattgaag cggttcgttt
    14161 aggagagctt aatagtgaaa cagcttttgt tcttgattat ttccaagtaa cagctccacg
    14221 cctagttcaa acagttgcaa atgaagtttc tgaagttgca cttgttgatc ataatgaacg
    14281 ccaacaaagc gtagacgata ttgacgatgt aacagttaca gctgtagttg accatcaccg
    14341 tatcgcaaac ttcgaaacat ctgacccact ttattaccgt gctgaaccag ttggatgtac
    14401 aacaacaatt cttctaaaaa tgttccgcga aaatgaagta gaagtaagta aaacagttgc
    14461 aggtctaatg ctttccgcaa ttatttcaga cacacttctt tttcaatcgc caacgtgcac
    14521 gcaagaagac aaagtagctg ctcaaaaatt ggcgcagatt gcagatgttg atattcaatc
    14581 gtatggcatg gaaatgctaa aagcaggagc agatgttagc aaaaaaacag tagctgaact
    14641 cctacttgat gcgaaagaat ttaacatgaa cgataacaaa gtagaaattg ctcaaatcaa
    14701 tgtagtggac gtaaacgatg tgcttagccg tcgcgcagaa gtggaagcac ttatgacgca
    14761 aaatattgtg gataaagggc ttgatttata tctattcgtc atcactaata tccttactaa
    14821 tgactctgtt ggaatcgcta ttggttcaaa aacagcagtc gtagaagaag catacggtgt
    14881 taaatttgtt gaaaaccaag caccacttaa aggcgttgta tctcgtaaaa aacaagttgt
    14941 tccaatttta acggacacat ttgctaaata attatattaa cctggaaaag ctaagcaact
    15001 tttccaggtt ttcttgtcta attttttaat tcgaagtaat tacgatttac attttctcta
    15061 ttattttata tactagtaaa agcggctagc aaatgctgtc aaaggagaaa catgaatgaa
    15121 caaaatcata gaagtaaata atgtaagcta tcattatgat aaagaacatg ccttagaaaa
    15181 cattcatttt caagttgcaa aaggcagttt tactggttta attggcccta atggttcagg
    15241 taaatcaact atgttaaagc taattcttgg tgtactcaaa aaacaacaag gaagcatctc
    15301 cttatttgga gaaaaacaag cagatttcaa agactgggtc aaaatcggct tcgtttctca
    15361 aaaatcgaac gcctttaact ccgcattccc agccactgtg aaagaagttg tcgcaagcgg
    15421 attaacaaag aaaaaaggct tatttaaaac attaaacaat aaagataaag aagacatcga
    15481 ttacgcttta aagcgagtag aaatgacaga ttatctgcat cgcaacatcg gggagctctc
    15541 tggtggccaa cagcaacgcg tttttattgc acgtgcgcta gttagcagac cagaactttt
    15601 aattctagat gagccaaccg ttggagtgga tgtcgaaaat gtcaaagctt tttatgaact
    15661 tttggccgaa ttaaaccgga cagaagaaat gacactttta ctcgtgacac atgatttgat
    15721 ggcagtgaat acgtatgtca atcatgttat tagcattaat aagcgtatta tttttgacgg
    15781 ttccgcacat gaatatcaac attatttggc tgaccgcgaa cttgaaatat tagcagaaca
    15841 gcgtagaagg gaggatgctt gccttgattg cgacgcttct ccagtatgat tttattcgta
    15901 atacatttat tgtaggactt gtgatcggta ttgtagctcc attacttgga agttttatcg
    15961 ttgttagaaa actttcttta atggcagatg cactgagtca tgtgacgctt ggtgggattg
    16021 cagtaagttt atttttaagt aaaacttatt taccattagc tgcccttaat ccgttatatc
    16081 ttggctttgg tttttccgtt gtaggatctt tattaatgga aaaacttcgc aacgtctata
    16141 agcattttga ggaactagca attccaatta ttatgtcggc tggtatgggt ttctctgtta
    16201 tttttatttc cttagcaaat ggctttaata cagatttgtt tagttattta tttgggagtg
    16261 ttagtgctgt tagccgcacg gatatgatta caattgtcgt tactgcgatt attgtattta
    16321 tcgttatttt atctttatat aaagaactat ttctgttatc atttgatgaa gaatatgcca
    16381 aagtttcagg tctaaaagcc aaagtattcg atgttatatt tatggtatta gtcgctcttg
    16441 taatagcgtc ttctatgcga atcgttggta ttttacttgt ttcgtcttta atgacattgc
    16501 ctgttgcagc agctattcgt attgctaaag gatttaaaca aaccatttta ttatcgattt
    16561 tatttggtga aattgccgtt atcggtggtc tgtttaccgc ttattacttg aatttagcgc
    16621 cgggtggagc catcgttatt atatccgtgc tacttttaat cgtcaccatt ttatatcaaa
    16681 aaatacgtca aaaaatctta atttcaaaac gaggtgagga aaatgggact tacagcaact
    16741 gaagcactca tgaaaatgaa ggaaaaaggc tataaacaca cagataaacg tgaatttcta
    16801 attaacttac tagcgaggaa aaataaatat ttgacggcaa aagatgtctt agaaaatatg
    16861 aaagatgatt tcccgggaat aagttttgat actatttacc gcaatctctc tttatttgta
    16921 gaattaggta tttttgaaga aacagatctt tctggtgaac gcaatttccg tttagcttgt
    16981 acacacgagc atcaccatca tcattttatt tgcatgaaat gtgggaaaac aaaagaaatt
    17041 atgatgtgcc caatggattt tttaaccgaa gctttacccg gttaccaaat tgacggtcat
    17101 aaattcgagg tttacggcga atgtccagaa tgtttacaag cctcttaata gcaaaaggtc
    17161 cgaattccgg gcctttttta ttttatgcgt aatgttcaca gttatttcat atttgtttct
    17221 tattctggac actttttatc gctaaagtaa gaagtagccg aaagacgaag gagaggaaca
    17281 gtttgacaaa attaaaaaaa gtgatgattt ccgtaatagc agctacatta ctactactcg
    17341 ctggttgtgg aagcagtgct gttgttaaaa cagatgcagg aagtgtcaca caagatgagc
    17401 tttacgaagc gatgaaaacg acttatggaa atgaggtcgt gcaacaactt actttcaaaa
    17461 aaatcttaga agataaatac accgtaacag aaaaagaagt aaatgcagaa tacaagaaat
    17521 acgaagaaca atacggtgac tcatttgaat caacgttatc ctctaataat ttaacaaaaa
    17581 cttctttcaa agaaaattta gagtataatt tacttgttca aaaagcaaca gaagcaaaca
    17641 tgaatgtaag tgaaagcaag ctaaaaacct actacaaaac ttgggaacca gatattactg
    17701 tgcgccatat tttagtagac gatgaagcta cagcgaaaga aattcaaacg aaattaaaaa
    17761 atggtgaaaa attcactgat ttagctaaag aatattctac agatacagca actagtacaa
    17821 atggtgggct tttagatcca tttggtcccg gtgaaatgga cgaaacattt gaaaaagcag
    17881 cctatgcatt agaaaataaa gatgatgtaa gtggcattgt gaaatctacc tacggatatc
    17941 acttgatcca attagtgaag aaaacagaaa aaggcactta cgctaaagaa aaagcaaacg
    18001 taaaagccgc atatattgaa tctcaattaa ccacagaaaa tatgatagct gcactcaaaa
    18061 aagagttaaa agctgctaat attgatatta aagatagtga tttaaaagat gcatttgcag
    18121 attacacaag tacatcttca acaagttcca caacaacatc taactaatat tacttcggat
    18181 ccacctatac aaaaagccct ttactggttt tgattcccgt caaaaacaca ctccagtaaa
    18241 gggcttttct atgcaaataa acgaatcatt gccatggaaa taattccaat aatcacaatc
    18301 cacattaaat ttttagtcaa aatagctgtt agaatggtag gaagtgatgc aagtaaattc
    18361 tctatattaa ttcctggaaa accattttcc cttgtaatta ataaactttg aacgaacagc
    18421 gcagtgagga tacaaagggg gacatacgat aaataacgaa tcactacatc tggaagctgt
    18481 aatttacgca caaatataaa cggcaagaca cgcggtataa acgtcacaag tccacatcca
    18541 acaatgacaa ataaagtata ggaacttaac gccatctctc tataatcact cccatcaaac
    18601 atccgagtaa ggttgcagtt aaaatagcta gttctggcgt catcacacgc ataaagagaa
    18661 ttaaaaatac agcgactagt atcatgacga acaaactcgt acttattttt ttgcttttat
    18721 cactcactac ttgtaaatat agcaaaccga taaacattgc agacaacgca aagtctaaac
    18781 caaattgttc tggatttggg agccagttgc caataaatgc cccaacgata caagcgacaa
    18841 tccatgccaa gtaggcagtt acatttattc cgtgcatcca tttagcacta acaggttttt
    18901 tattaccaat ctgattcatc gaaaccccaa acgtttcatc cgtcagaagg gcaccaatcc
    18961 caatattatt ccacaaagaa tacttcttaa aatgaggagc ttccgccata ctcattaaaa
    19021 aatgccttga attaattaaa aaagtagtaa aaatgattgc tgatatcgga ctttgtagta
    19081 ataacaaacc agaaataata aattgcgccg cacctgcata aacgataatc gcaagtagcg
    19141 tcacttctaa aaggcttaaa tgggatgctt ttcctactac tcctgcagcg ataccaatcc
    19201 cagcataacc aaggacggta ggaaggcagg ctctaacacc atcataaaaa ctaagctcat
    19261 tttctttttc caacaaaaat cccccttgaa acaaaaaccc caatacgatt atctaaggct
    19321 ttccaaatct gttttctttt caaaatattc ttctgccaaa atatcaattt ctttcttaag
    19381 ttcttctacc ataatggctt ctggtacttt tcggatgatt ttaccatgtc taaaaagaag
    19441 gccttctcca tttgaaccag caattccgat atctgcttcg cgagcttctc cgggaccgtt
    19501 gaccgcacag ccaagcacgg ctactttaat cggagcttta atcgttgcta tgtaattttc
    19561 cacttcatta gcgatacgaa tcaaatcaat ctctattcga ccgcaagtag ggcaggagat
    19621 aagcatggcg gcattcgagg aaaggccaaa cgattttaaa acctcccggg ccacttttat
    19681 ctcttccaca ggatcagcac tcaaagatac ccgtaatgta tttccaatgc ccaaactgag
    19741 tatcgctcct aaaccagcag cactttttat tcctccagca aactgcgtac cagattctgt
    19801 aattccaaga tgtagaggat aattaaatgc gcgactagct ttatcataag cttcaattgc
    19861 taaattcaca tcagaagctt tcaaagaaac aatgatatca taaaaatcta aatcttcgag
    19921 aattttaata tgggcaagtg cactttctac cattccttca gcagtagggt aaccgtattt
    19981 ttgaataatt ttcttttcta aactaccagc attaacccca atacggattg gaatattttt
    20041 tgctttagaa gcattaacca ctttttccac ccgatcacgg cgaccgatgt taccaggatt
    20101 aatccggatt ttgtcaacac ctgcatcaat agctttaagt gctagtcggt aatcaaaatg
    20161 aatatctgcc acaagaggaa tatgaatcct tttcttgatg gcactaagag cattggctgc
    20221 acgctcatca ggacaagcaa ctcgcacaat ctgacaaccc acctcttcta atcggtgaat
    20281 ttccgctact gttgcttcga catcatgtgt ctttgtagta gtcatgcttt ggatagttaa
    20341 ttcctcacta ccaccaatag ttaaattacc tacttggact ggccgagttt tttcgcgaaa
    20401 gattctttca ttcaaagaga ccgctccttt agactagctt ttatttttta tcataccatt
    20461 ttcatgaaac aaaatcacgt gaatgatgcc acaaaaaagc cacctacgtg agcaagtggc
    20521 tatcatttat ttctctaaaa ttgtagggtc gcttggagga attgaacgaa tcgcaaggaa
    20581 aacaaaaatc atactcacga ccatattaat ttccattcca aaaggaacaa taatttgtaa
    20641 agcctccata atcatagtga aaactgctgc cagggtaata ctgtaagaag caatcatcca
    20701 attttggcgg aaggcgatac cagttcggcc aaatccagaa aggataaatc cgaaaagtgc
    20761 atacagtgct actcggaaga agaccgagcc taacgtaaag ataaagagca ctagtaaagc
    20821 aattggaata aagtatttag ctaaagactc aatcgaatta tataaatgaa ctaaatctga
    20881 cttatcacta attcctgctg tgtcataact aacagattgc gaaacaccag ctgcagtaat
    20941 ataaatacta tctgaaagaa aagctaccgc gctatcataa gaagcgattt tgttatctac
    21001 atcatcctta tccagtgttc cagaagcatc aaaataaata tgtagttcat cttgatcaat
    21061 cgagataggt atattctttg catttttatc tgttaacact aatttgccat cagtcacttt
    21121 aaaatcgggg atttcattgg tgatagtttc ttcgccaact ttaagtgcat tttttgttgt
    21181 aatgtttgta aaatatgcta atggaaggaa tgttacaaat gataaaacaa taatgtacac
    21241 gatacttttc ctaattttat catttcgaaa cgatgctata tccgcagggg agtataaact
    21301 cttccagaag cgtttaaaaa tattcattct tttttcaaca cctcgcctaa tggtttaact
    21361 tttgagtttc agggaaaaag atacatgtat gtgcaaaaga acgtactttt tccacctaaa
    21421 cttaatcata gctcgaaatg gttgcaaaat caatgttgaa acatcactga gcagaaaaat
    21481 tgcaagcatt tcaggagcat ggtaggctaa atggtgtaag aagaaactgt ttttaaggtt
    21541 gatagtagtt ctattgaaat gggacatgaa acttttgcct tatacgtcat ttcttttcac
    21601 gtaaaaacaa tacaaggagg aatttttaat gacttacgaa ttacctaaat taccttatac
    21661 ttatgatgct ttggagccga attttgataa agaaactatg gaaattcact atacaaagca
    21721 ccacaatact tatgtgacaa aactaaatga agcggttgct ggtcatcctg aacttgcaag
    21781 caaatctgtg gaagaattag tagctaactt agatagcgtt cctgaagata ttcgcggcgc
    21841 tgtccgtaac cacggtggcg gtcatgctaa ccatacatta ttctggtcta ttcttagccc
    21901 aaatggtggc ggcgctccaa ctggtaattt aaaagcagca atcgaaagcg aattcggtac
    21961 ttttgacgaa tttaaagaaa aattcaatgc agctgctgca gcacgttttg gttctggctg
    22021 ggcttggcta gtagttaatg atggcaaatt agaaatcgtt tctacagcta accaagattc
    22081 tccactaagc gatggcaaaa cacctgttct tggcttagat gtttgggaac atgcttacta
    22141 ccttaaattc caaaatcgtc gtcctgaata tatcgacaca ttttggaatg ttattaactg
    22201 ggatgaagct aacaaacgtt ttgacgcagc taaataataa tcacaagact cacttcggtg
    22261 ggtctttttt tatttctaat gaatttctaa tgaacttaca gtggaaaaat catgttattt
    22321 cagctacaat agggaaaggt attattgaaa agtgaggtaa ctatgcgtga aactaaattt
    22381 tagaaaaaag aaaaaagatt ccactaagaa gaaacgcgcc atcattccac tacgtttaaa
    22441 tattctattc tttattattt ttatattatt ctccgtgtta attttacgtc ttggtattgt
    22501 tcaaattgtg caaggggata cgtacaaacg tcaattagaa gaaacagata acgtaacagt
    22561 ttccaaaaac gtaccacgtg gtagcattta tgaccgaaat tacaatttgc tggttggtaa
    22621 ttcagcggtt aaatctatta cttacacacg tagtcaacaa acacagactg cagaaactct
    22681 acatgtagcc caaacattag aaaagctaat tactgtcgag cctgaaaagt taactgaccg
    22741 tgatttgaaa gattactgga ttttaacgca tcaaaccgaa tcgctaaacc gcttatcagc
    22801 gaaagaacaa gcgcttgatt catctaaagc ctacaaaatc caagttgaca aagtgacaaa
    22861 agaagatatc gctagcttga ccagtgaaga cttaaaagta gcaaccatct ataagaaaat
    22921 gacaactgga tatgctatga ctgaatctgt tgtgaaaaat aaagatgtaa cagacgaaga
    22981 aatcgcacgt gtcagtgaaa atatggacag tttacctggt gtagatacta ctacagactg
    23041 gaatcgttat tacacatatg atgaaacttt acgctcaatt ttaggttctg tttccacagc
    23101 taaagaaggt ctaccaaaag acaaagcgga atactactta tctcaaggat atagtcgtaa
    23161 tgatcgcgtt ggtaaaagct atctagaagc tcaatatgaa agtgtgctcg ctggatcaaa
    23221 atctcaatca gaaagcgtac ttgattctaa aggtaatatt attgaaactg tcaacaaata
    23281 cgaaggctcc aaagggaaag atttagttct ttctgttgat gttgaatttc aaaaagcagt
    23341 agaagaaatt ctcaaaaaaa acatcaaaca aggtaaacaa tatgctggtt cagatttatt
    23401 tgaccgcgca ttcgttgttg ccatggatcc atattccgga gaagtccttg cactagcagg
    23461 acagaaacta aatgacaagg gtgagtttga agattattcc cttggtacat ttacaactgc
    23521 ctacgcaatg ggctctgctg tcaaaggttc tactatcctt ggtggtatta tggacggcgc
    23581 tattacaaac aaaactgttt tcactgacca accaattgta ctaaaaggaa caaaaccaaa
    23641 gagctcatgg tttaacagaa ccggagctgg taatagacca cttgatcctg taggagcttt
    23701 agaaatttct tctaactcct atatgtacca agttgcaatg aaaatgggtg gcgcaaacta
    23761 tgtaccaaac ggacctctta gagcaccact tagcaccttt gacgatatgc gttactacta
    23821 caaccaattc ggtctaggtg taaaaactgg catcgacctt ccaggtgaac aaactggtta
    23881 taaaggggac gaccaaacaa tcggtaaaat tctcgatttc gctatcggac aatatgactc
    23941 ctacacacca cttcaaatgg ctcaatatgt ttctactatt gccaatgggg gctcaagaat
    24001 cgctcctagt atggtaaaag aaattagaaa tccaagtact aatggtgact ctgttggaac
    24061 acttgcaaca gctaatgaac caaaagtatt aaataaaatc ggtgtttctg aaagtgatat
    24121 caaaacagta caacaaggct tctatgaagt aacacatggt tcaacaggta ccgcaagaac
    24181 tgttttcact tcaagtgatt acgatgtcgc tggtaaaaca ggcaccgcag atgcgttcta
    24241 tgatggacca aaagaaggta acaaaatggc cagtgtttgg aatacaacat tcgtcggtta
    24301 tgcgccagtg gaaaaaccgg aaatagcaat ttccgttgtt gttccttgga tttatcgtcc
    24361 atatggtacg gaccaaaaaa caaatatgaa aatctccaaa gaagtattcg acaaatactt
    24421 cgaacttaaa aaagaacgct ctgaatcgaa aaaagatact tcaaaagtag aacaaccaat
    24481 taacaacaaa gaagctgctg cgaaagcaca atcagaacaa accgaaaatt aatcaaaaac
    24541 cactttcatt tatttggaag tggttttttt atttcaaact aacaaacaat ttaaaaaaat
    24601 agttgctaat gcgtagaaaa aactgcgaaa aggctttgtt tatggtatga taaagtaagt
    24661 gtaaaattaa ccagatttct gtttttaggc aggaatacga ggattaaatt gaaggaggaa
    24721 ttgtaaacta tgacaaaaag ctatcatgtc gcagttgtag gtgcaactgg tgcagttggt
    24781 acccaaatga ttgaattact agaagaggcg gcgactttta agataaagca agtttcattc
    24841 ttgtcttcta ttcgttctgc tggaaaaaaa ctatccttcc gtggtgaaga agtaactatt
    24901 caagaagcca cacctgaaag ttttgaaggc gtagatatcg ctttatttag cgctggtggt
    24961 tctgtatcga aagcacttgc gaaagaagca gttaaacgtg gagctatcgt tattgataac
    25021 acgagtgcat atcgtatgga tccaacagtt cctttagtcg ttccagaagt gaatgaaaaa
    25081 gcacttttct cacataaggg tattattgct aatcctaact gttccactat tcagatggta
    25141 gcagccctcg aaccgattcg agaagcattc ggcttaaatc gtattattgt ttccacttat
    25201 caagctgttt ctggctctgg tgtaagcgcg attcaagaat taaaagatgg tagcagagca
    25261 gttttagata acaaagaatt cactccacaa atcatgcccg ttaaagggga caaaaaacat
    25321 tatccaattg cttttaatgc attgccacaa attgacgttt tcacagagaa tgactataca
    25381 tacgaagaaa tgaaaatgat caatgaaaca aaaaaaatca tggaagacaa cacaataaaa
    25441 gtttctgcta cgtgcgttcg tatcccagta gttagcggac actctgaaag tgtttatatc
    25501 gaagtggata aagaaggcat aactgctaaa gaaatccaaa atgaactaaa aaacgcacct
    25561 ggtattgtcc tagaagatga cccagcaaat caagtttacc cacaagctgt tcaagctgca
    25621 ggtaagaaag aagtcttcgt tggtcgtatt cgtgctgaca ttgacgatcc taaaggtttt
    25681 catatgtgga ttgtttctga caacttacta aaaggtgccg catggaattc gattcaaata
    25741 gctgaaagtt tagttaaact agcgattatt tagaggtgta agtaatgaaa attattgtcc
    25801 aaaaatttgg cggaacatcc gtacaaaatg aaaaatcacg tttgatggca ttcaatcata
    25861 tcaaacaagt actaaaagaa ggatataaag ttgttgttgt cgtttcagcc attggtagat
    25921 acggagatcc ttatgcgaca gacacactat tagaacttat tggtgctaaa aatacaaagc
    25981 taacagcaag agaacaagat actttactct cggtaggcga aactatttca gcatctgtat
    26041 ttaccaatat gttaaaagaa gcaaatatta aagcagaggc gttttctggt ggtcaagcag
    26101 gcatcattac atcagacgac catttaaatg caaaaatcac agaagtggat acagctcgtt
    26161 tgaaagatgc attaacgaac cttgatgtag ctgtagttgc tggcttccaa ggtattactg
    26221 caaatgggga tatttccaca ttaggacgcg gaggaagtga tacatccgca gcggctctag
    26281 gagtttcgtt acaagcagac tatattgata tctttacaga tgtagatgga atgatgacag
    26341 ccgatccacg tattgtagaa cacgcacgtt cacttccacg agtaagttac aacgaagtaa
    26401 gcaatatggc gtatcaaggt gcaaaagtga tccatccacg tgcagttgag atagcgatga
    26461 ctgcaaaaat accaatgcga atccgttcta cttatttgga aagcactgga acacttgtta
    26521 cttcattaac caatgattca gatcattttg acgtgaaaga acgaatagta accggcgtag
    26581 ctcatgtaac caatttaaca caaatatccg tacaaacaga tacggtaaaa gcgcaacaac
    26641 tcgcttttga aatattagca gatgcaggaa tcagccttga tttcattaac atctctacca
    26701 actctgtcat ttttacggtg ccagaagaaa aatctcatgt agtaaaacaa ctattagaag
    26761 atgcagactt acaaacaact gtacgacaag cttgtgcgaa agtttctatt gttggcgccg
    26821 gaatcacagg cgttcccggt gttactgcaa aaatcgttgg cgcattatct gaaaaaaata
    26881 tccctatttt acaatcagcg gatagtcata ctactatttg ggtattagta aaagaagagg
    26941 acttaatttc agcagtcaat gcccttcatg acgtattttg tttggaaatt aagtaaggag
    27001 gaaatgaaag atggatttag ggaaagtaat tacagcaatg gtgacaccaa ttcacccaga
    27061 gaaagataaa gtatgcaaaa aaagaattca tcatctcgtg aatcacttaa tcaaaaatgg
    27121 ctcagacggt ttagtaatcg ctggaacaac tggcgaatct ccaactttat cccatgatga
    27181 aaaaataaaa ttattccgcc aagtaattga aacaaatgac ggacgtgcaa aattaattgc
    27241 tggaacaggc tccaataaca cagctgaaac aattgctttt acaaaagaag ttgctgaact
    27301 cggtggaatt gacgctgttt taatcgttgc accgtattac aataaaccaa atcaagatgg
    27361 gttatacgcg cactttgctg cggtttctga agcttctgat ttacctgtag ttatctataa
    27421 tattccgggt cgtagtgttg ttaatatcga gccagaaaca attatccgcc tagcaaaatt
    27481 acctaatatt gttggtgtaa aagaatctag cggtaacttg gataatataa gtaaaatcat
    27541 tgctgaaacc tcagacgatt tccaagtata cagtggggat gatagcttaa ctttaccaat
    27601 ccttgcagtt ggtggaaacg gcgttatttc tgttgctagc catgttgtag gaaatgaaat
    27661 gcaagaaatg attcaagcat ttgagcgtgg agaagttcaa aaagctgctc aaatccaccg
    27721 agaattattg ccactcatga acggtttatt ctctgtacca aacccagcac cgacaaaata
    27781 tttactcaat caacaaggca ttagcgttgg gcctgtaaga ctaccacttg tagatttgaa
    27841 tgctgaacaa ggaacgaaat tacaagctat attagaagga ctttctaaat agttcaaagg
    27901 aggtctacgc tttgacaata aaaaaagcga aaaacataaa aatcattcca ctcggcggtg
    27961 tcgatgaaag tggcaaaaat ttatatgtag tagaaataga cgaagatatc tttatattag
    28021 atgcgggctt aatgttccca gaaaatgaat tactaggaat tgatattgtt attccagatt
    28081 tcaaatattt agaagaaaat aaagatcgtg taaaagctgt tttcctaaca cacggtcacg
    28141 aagatgcaat tggagcattg ccatacttgc ttcaaaaaat caaagcacca gtttatggta
    28201 cagaattaac gatagcactg gcaaaatcag cacttaaaga acaccgtaaa ctacgcttca
    28261 agaatttcca tgtcgttaac gaagaaacaa ctttatcctt ttcaaaaatt gatgtttcct
    28321 ttttccgtac aacgcacact attcctgatt ctgttgggat tgttcttgaa acaagcgaag
    28381 gatctattgt ttatacaggg gatttcaaat tcgatcaatc agcgaaggac ggctatgctt
    28441 ctgatttaag ccacattgca gaatttggcg aaaaaggggt actagcttta ctttcagata
    28501 gttcagaggc tgagcaccct ggaacaacgt ctagcgatag tttaattgaa gaagaaatta
    28561 gacatgcgtt ccgaatggca gacggcagaa ttatcgtcgc ttgtgtagct tctaatttaa
    28621 ttcgcttaca acaagtactc gatgcatccg ttgcaaccaa acgtaaagtc gctattgttg
    28681 gtaaagaatt agagcgcgtt ttcgaaattg ctggcagttt aggtaaaatc gtcattgaag
    28741 aagacttaat tgttccgtta aaagaactta aaaaatatag cgatgacgaa attactatta
    28801 ttgaaacagg taatctagga gaaccaattc aatcattaca attaatgact aaaggaaatc
    28861 atccacaatt caacatcaaa cctggtgata ctgtttacat tacgacgacg ccatcaccat
    28921 ctcttgaaac aatgatggct aaaacaatgg atatgctcta taaagcaggt gcgaaagtgc
    28981 taactatgag caataatcta ttcatctctg gtcatgcaag tcaagaagac tt
//
LOCUS       DASDYK010000027        26391 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.027, whole genome shotgun sequence.
ACCESSION   DASDYK010000027 DASDYK010000000
VERSION     DASDYK010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 26391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26391
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.027"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..100)
                     /locus_tag="U0308_001166"
     CDS             complement(<1..100)
                     /locus_tag="U0308_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall teichoic acid glycosylation protein
                     GtcA"
                     /protein_id="HEM2316135.1"
                     /translation="MSKIRQLLNKIPWYTDQVHSIFMYLIMGGFTTI"
     gene            complement(133..1404)
                     /gene="rho"
                     /locus_tag="U0308_001167"
     CDS             complement(133..1404)
                     /gene="rho"
                     /locus_tag="U0308_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEM2316136.1"
                     /translation="MAKLSIAYLESLTIKEIYALAKEHKITYYSKLTKRELIFALLKS
                     NAEKEGFFFMEGVLEIIPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDKVSGK
                     VRPPKENERYFGLLHVEAVNGENPEVAKERVHFPGLTPLYPDRQIHLETGKNPISTRT
                     IDLISPIGFGQRGLIVAPPKAGKTVLLKEIANAITTNHPESELIVLLIDERPEEVTDI
                     ERSVKADVVSSTFDEVPENHIKVAELVLERAMRLVEQKRDVVILMDSITRLARAYNLV
                     IPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEF
                     KGTGNMELHLDRQLAERRVFPAIDMRRSGTRKEELLLSKERLEQLWKIRKAMPKQSDG
                     LDISERFVRYLKKTENNEAFYELLQEEMFKK"
     gene            complement(1509..2780)
                     /locus_tag="U0308_001168"
     CDS             complement(1509..2780)
                     /locus_tag="U0308_001168"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEM2316137.1"
                     /translation="MTDKLIIRGGKKLAGTLQVDGAKNSAVALIPAAILAESEVVLEG
                     LPDISDVHTLYNILEELGGTVRYDNKTAVIDPTDMISMPLPSGNVKKLRASYYLMGAM
                     LGRFKKAVIGLPGGCYLGPRPIDQHIKGFEALGAKVTNEQGAIYLRADELKGARIYLD
                     VVSVGATINIMLAAVRAKGKTVIENAAKEPEIIDVATLLTNMGAIIKGAGTDTIRITG
                     VEHLHGCHHTIIPDRIEAGTFMVLAAASGKGVRIENVIPTHLEGIIAKLTEMGVPMDI
                     EEDAIFVGEVEKIKKVDIKTYAYPGFPTDLQQPLTALLTRAEGSSVITDTIYPSRFKH
                     IAEIERMGGKFKLEGRSAVINGPVQLQGSKVTATDLRAGAALVIAALLADGETEIHGV
                     EHIERGYSKIIEKLSAIGANITRSSAAETKL"
     gene            complement(2897..3970)
                     /locus_tag="U0308_001169"
     CDS             complement(2897..3970)
                     /locus_tag="U0308_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012580737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase-like domain-containing protein"
                     /protein_id="HEM2316138.1"
                     /translation="MSGGAKKNLFNIAIVLAISIGFIIWQFQGVDISTFFASMLKVNP
                     WWLSAAFAAMFIYWFLEAVVLQTASKPANKDQRFFSSFRITMIGQFFNTITPMATGGQ
                     PAQLVMLTKQGMDAGRGSSVLLVKFIIYQAMVVLNFLVILIFGIHYLMTGVTQLKFLV
                     LLGFGVHVIVIAALILVGRSQKFTTKLVHVLLIPTRLFMKKEKVSNLRNTLDEKIITF
                     HEESSRIGKDWKLIVRCCFYTTLQLWIYFSIPFFILQAIGVTGIGLYMAITYHAFIIM
                     FATVMPTPGGAGGAEYTFTLLFGMLLGPAKLLMALVLWRIITYYSCIVFGAGALLIKD
                     TASKKIKPRIKALAKAPAKNIPQ"
     gene            complement(3977..5002)
                     /locus_tag="U0308_001170"
     CDS             complement(3977..5002)
                     /locus_tag="U0308_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEM2316139.1"
                     /translation="MIKLTMLSSAEKVKGQGVASAYRELVNLLEERYKNEIDMKINSF
                     EKSDITHYHTVDFRFFLSTFFKKKRGVRVGYVHFLPETMEGSLKLPWIARVVFYKYLI
                     GFYKRMDEIVVVNPSFIPKLTAYNIPAEKIHYIPNFVSKKSFFPISKGEKELARAKYE
                     IPADKFTVIGIGQVQHRKGVLDFIEVAKQLPDVQFVWAGGFSFGKITSGYEELKKIYD
                     NPPSNVKFIGIVDRSEMNSCINMADVFFMPSYNELFPMAILEAMSCDVPILLRNLDLY
                     EEILDGYYVKEVDNPGFIRAIERLENDTNYYNEMLQASKRGAAYYSEDRLAEIWLDFY
                     QGLLTKE"
     gene            complement(4995..6278)
                     /locus_tag="U0308_001171"
     CDS             complement(4995..6278)
                     /locus_tag="U0308_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEM2316140.1"
                     /translation="MNIGIFTDTYSPQISGVATSIMIMENELRKQGHTVYIFTTTDPN
                     ADRESEEGRVFRLPSIPFVFFPERRVAIAGMNKFIKLVGRLDLDIIHTHTEFSLGLLG
                     KRIAKKYHIPSIHTYHTMYVDYLHYIAKGKILTPSMVGKMTKSFCDSYDAIITPTAKV
                     RHHLEEQGIHKLMYTVPTGTDISSFAPVEKQRILNLKKLLGIGENDPVILSLGRIAHE
                     KNIDAIINAMPEVLQTKTTAKLVIVGDGPVRKDLEKLVEEKQLADHVIFTGAVDWENI
                     SLYYQLGDLFVSASTTETQGLTYAEAMAASLPVVAKRDESIEGFLSDRETAFLFNEDD
                     ELASLLINILSDKNTATLVATNGRVKVESISADQFGINIESTYNEVREIYRVKRQNGT
                     IKVKPTLIKSKIASQVFSLSSSTHVQRKERSSRRD"
     gene            complement(6599..7453)
                     /gene="fba"
                     /locus_tag="U0308_001172"
     CDS             complement(6599..7453)
                     /gene="fba"
                     /locus_tag="U0308_001172"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-1,6-bisphosphate aldolase"
                     /protein_id="HEM2316141.1"
                     /translation="MPIVNMTDMLKKALAGKYAVGQFNINNLEWTQAILKAAEAEKAP
                     VILGVSEGAAKYMGGFKTVVKMTEGLVEDLKITVPVAIHLDHGSSFDSCKAAIDAGFS
                     SVMIDGSHHPIDENIAMTKQVVDYAHAKGVSVEAEIGTVGGDEDGVTGGINYADPQEC
                     LRVVKEANIDALAAALGSVHGPYHGEPVLGFDEMKEISELTGAPLVLHGGSGIPEHQI
                     KKAIELGHSKINVNTECQIVWTAAVREKLATDDKVYDPRKVIGPGVDAIIKTVTEKIQ
                     EFGSNGKA"
     gene            complement(7621..8541)
                     /locus_tag="U0308_001173"
     CDS             complement(7621..8541)
                     /locus_tag="U0308_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family lipid kinase"
                     /protein_id="HEM2316142.1"
                     /translation="MQKKAMIIYNPAAGKNKFRKLLPDAEKILTEADFEVTLVPSTPA
                     PKSTTFIAKQAAEAGFDVVIAAGGDGTVNEVVNGLMQVDTPPKLGVLPVGTTNDYARA
                     LNFAKNPLEALRIIAKQETIRVDIGKANETEFFINNAAGGKITEITYAVKESMKSKWG
                     RLAYLFSGLTVLPKLSPVYVEIAYNDKIFKGEILLFFVNKSNSVGGMETLCPPAELNS
                     GMFELLILKKVSPKTLFQLFASIKKGTHLSSPHVIHARTNKVTINSEADLNVSYDGVY
                     GGKAPYTLEVIPEALEVFADTNRISSRLRG"
     gene            8858..11170
                     /locus_tag="U0308_001174"
     CDS             8858..11170
                     /locus_tag="U0308_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2316143.1"
                     /translation="MKKLVKSAVVFASLVFIGTSATMITEKASAASIDPVQKADGQAT
                     YIPKGVRDGTATEEHDGFEDGTNSVLQQVPLLRATTGYPDVNAYIKSNKFSTAKIEKQ
                     LKSQFPKFNYRNGYGKPEGIVIHETANNSSTITGEINYMSTNYNNAFVHAFVDKSRII
                     QIHPTENGVWGAGQYANARFIQVELVRSKTFDEFARSINNYAYYAAYLLDQYNLPVDS
                     AHSDGKGTVWSHDAVTRYLGGTTHTDPVSYFNQWGYNFNSFVTLINEKYKAIQASKVT
                     YDKIEYDKGVTAYARVKTAPGNAVWTKPYRTEGSKLVNQLSVYQGKNMRILREAKTPI
                     TTWYQFSIDGKVIGWVDTRALDTFYKQSMEQPANLTRYVASNKTGEAYYKVPVVDADV
                     KWGTLAAYKDQKLTVDKQATVEGQLWYRVRTSTTFIGWTKASNLTATSPFDKIEYDKG
                     VTAYARVKTAPGNAVWTKPYRTEGSKLVNQLSVYQGKNMRILREAKTVITTWYQFSID
                     GKVIGWVDTRALDTFYKQSMEKDTNLTRYVIANKVNEAYYKVPVVDADVRWGTLAAYK
                     DQKLTVDKQATVEGQLWYRVRTSTTFIGWTKASNLTTTTPYDKIEYDKGATAYARVKT
                     APGNAVWTKPYRTEGSKLVNQLSVYQGKNMRILREAKTVITTWYQFSIDGKVIGWVDT
                     RALDTFYKQSMEKDTNLTRYVIANKVNEAYYKVPVVDADVRWGTLAAYKGQKLTVDKQ
                     ATVEGQLWYRIRTSSTFIGWTKASNLSATK"
     gene            complement(11223..12821)
                     /locus_tag="U0308_001175"
     CDS             complement(11223..12821)
                     /locus_tag="U0308_001175"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEM2316144.1"
                     /translation="MTKYIFVTGGVVSSIGKGITAASLGRLLKNRGLSVTIQKFDPYI
                     NVDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFIDINLNKYSNVTTGKVYSEVIKKE
                     RRGDYLGGTVQVIPHITNELKDRVFRAARMTNSDIIITEIGGTVGDIESLPFLEAIRQ
                     IKSDVGAENVLYIHTTLIPYIKAAGEMKTKPTQHSVKELRSLGIQPNIIVVRTEQPVS
                     QEMKDKIALFCDIKASEVIESRDEETLYNVPLSLQKQKMDDIVLEHLQLEAPQAEMTD
                     WKNLVHRVKNLSKKVRIGLVGKYVSLQDAYLSVAEALRHAGYDHDAEIEIDWIDSEKV
                     TKENVAEIMKDVDGILVPGGFGDRAIEGKIAAIEYARVNKVPYFGICLGMQLATVEFA
                     RNVLGLEGAHSAEIEPETKHNIIDLLPEQKNIENMGGTLRLGLYPARIKQGTKAEAAY
                     GTTLVEERHRHRYEFNNEYREQMEEAGMIVSATSPDGRLVEVVELADHPWFVACQYHP
                     EFISRPNRPQSLFKDFVGAALNNK"
     gene            complement(13186..13722)
                     /locus_tag="U0308_001176"
     CDS             complement(13186..13722)
                     /locus_tag="U0308_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit delta"
                     /protein_id="HEM2316145.1"
                     /translation="MDLKNLTQEERSELSLIDVAHFILEQRKETILFPELVKEIQAFL
                     GLKDAEIRERLVQFYTDMNIDGNFISLGNNTWGLRAWYPMDAIDEEVQTQTTPKKKRK
                     SDDDDDEDEEILDDDVDYDDEEIVEELGEEEISLADVLLDEDEDDDDHLPDGIEGDLA
                     TVEDDYTDGDYTEDPEDK"
     gene            complement(14088..15758)
                     /locus_tag="U0308_001177"
     CDS             complement(14088..15758)
                     /locus_tag="U0308_001177"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEM2316146.1"
                     /translation="MNVMQENQIKLIEHIKQGVVQAVGLEEAEVPEILLEVPKDKKHG
                     DYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTD
                     LVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAG
                     FDVSREYYINDAGNQINNLVLSAEARYFEALGLDSEFPEDGYRGADIISLGKDLAAKY
                     GDKYVHTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWFSETSLYEENKVLPAL
                     ERLRENGYIYEQDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDV
                     LIDIWGADHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVT
                     MRDLIEEVGLDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRS
                     GKEQGLEVTKDADMSLLQTEAEYDLLKVLGEFADVVAEAATKRAPHRIVRYLNDLASS
                     FHRFYNSNKVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM"
     gene            complement(15755..16204)
                     /locus_tag="U0308_001178"
     CDS             complement(15755..16204)
                     /locus_tag="U0308_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1934 domain-containing protein"
                     /protein_id="HEM2316147.1"
                     /translation="MTANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRY
                     LHYEEKQLAGTIRTVLKIADNELLLMRSGAVNMRMHFFRDNRRSTASVDSGAGKLQLE
                     SELVSMEELYENKPDVLSEVAFQYDLLSHGEYIGSYTVLMKIEEDAE"
     gene            complement(16282..16935)
                     /locus_tag="U0308_001179"
     CDS             complement(16282..16935)
                     /locus_tag="U0308_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEM2316148.1"
                     /translation="MPSFLAYPLEMIPYVLVTLLIAFTIHEWAHALVALAFGDDTAKN
                     EGRLSLNPVVHIDLFGLLMILIAGFGWAKPTPVNRFKLKKRRLGSILVSLAGPVSNLL
                     LAMVGVGLYALFLNYSFFTYGSVAETFLMIFVQLNLVLFVFNLIPLPPLDGYQILVEF
                     LPMSTRSKLEPLERYAMLIFLVVALTPISEFTIQPIFNTVIPFVLNVILTIFGLTSF"
     gene            16970..17194
                     /locus_tag="U0308_001180"
     CDS             16970..17194
                     /locus_tag="U0308_001180"
                     /EC_number="5.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase"
                     /protein_id="HEM2316149.1"
                     /translation="MCYNEKNVDRGEKMPFVTIQFLEGRTDDQKKALVSEVTEVVAKN
                     LKAPKENIHVILEEMKKTDYGVGGVRKSDI"
     gene            complement(17229..18551)
                     /locus_tag="U0308_001181"
     CDS             complement(17229..18551)
                     /locus_tag="U0308_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEM2316150.1"
                     /translation="MSYLTEKLREEKVFKDPVHGYVHVSDKIIWDLIATKEFQRLRRI
                     HQLGTTSLTFHGAEHSRFNHSLGVYEIVRQIIDVTFANEPQLDPEERMVALCAALLHD
                     LGHGPFSHAFEKVFGTDHESYTQEIIIGDTEVNKILMRAGEEFPLKVAAIIKKNYPNQ
                     TLVKLISSQIDADRMDYLLRDAYYTGVSYGKFDLERILRVLRPSPDGNGVIVKYSGMH
                     AVEDYIMSRYQMYQQVYFHPVSRSGEVLLWKILERAKKLYCAGYEFQATPIQVLPFFL
                     NEVSLKDYIVLDDIVLMYYFSIWQEEEDPILSDLCSRFLNRRLLRYINYDPKEDAELY
                     AELKGLLEKADIDPSYYLVIDSSSDLPYDYYLPGVGSGKDPIKLLMGNGELRELSTES
                     PVVEAIGRERRTDIKLYYPLDFIESGHVEEAITERMIALIHAHSLKEK"
     gene            complement(18566..19402)
                     /locus_tag="U0308_001182"
     CDS             complement(18566..19402)
                     /locus_tag="U0308_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl-[GcvH]:protein N-lipoyltransferase"
                     /protein_id="HEM2316151.1"
                     /translation="MNIEDTLLKQDVWRFIDNTTINPAFDAIQSFATDDTLCRSVGAR
                     MAPSTVRGWVHEKTVSLGIQDSKLPDIDKGIAFLQEQGYRVVVRNSGGLAVVLDSGVL
                     NLSMVLPDAERGIAIERGYETMFTLIKDMFVDCNEVIEAKEIEDSYCPGSYDLSIQGK
                     KFAGISQRRMAKGVAVQIYLAIDGDQTTRSELIRDFYTISGKAKQTKYTFPDVNPNVM
                     GSLSDLMKNDISLNGTLVRLFNSLRHYAGELVSGTLTSEELDLFPAYYERLIARNDKV
                     LT"
     gene            complement(19720..19920)
                     /locus_tag="U0308_001183"
     CDS             complement(19720..19920)
                     /locus_tag="U0308_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316152.1"
                     /translation="MNSFWKIFFTVILGFIALNIVLDIVGITLHFLFPVLILGGIGYL
                     LYRMWGNSPKRSSRDNEDRYNW"
     gene            complement(19943..20266)
                     /locus_tag="U0308_001184"
     CDS             complement(19943..20266)
                     /locus_tag="U0308_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HEM2316153.1"
                     /translation="MKKGLFGLLAAIFVLTMVVIEFSAPIGSAANTYYVTIKNDGKEV
                     TKSKFKGYSFRESCLDNQGNSHKVNFMSTTQLKKNKQYKIVVQDNELLVQAKEINSVP
                     LASSK"
     gene            complement(20420..22081)
                     /locus_tag="U0308_001185"
     CDS             complement(20420..22081)
                     /locus_tag="U0308_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2316154.1"
                     /translation="MHKTARKMVVALSLLCLLALTACQSGNKGENEKVTSDKKSKVVN
                     IMETSGIPNASPTLADNSVSFRVINQIFEGLYRLDKNGKPALALAASEPEEKDGGKTL
                     IFKIREDANWSNGDPVTAHDFEYAWKKVVDPKTAAAYGPQMEEIVKNATQILKGEMSP
                     DELGIKALDDKTLQIELENPVPIFKELLTTGTFFPQNQAFVEKQGDRYGTKSDTLISN
                     GPYKLENWNGTNMTWDYVKNPTYWDKKNVPTKKIHVTVVKDTNAALNLYNTNKLDRVE
                     LDGEFVKQYKDDKNFHKEATGRSVYMKMNQGKDGVKTDLANLNLRRGLAMAIDKTGMV
                     NTLLANGSKALNGDVPGDIMFDPETKEDFRKQNGDLLKFDQQEATNAWKQGLKEIGKT
                     ELTLTLTSGDTSLQRKQTEFIQNQLEENLPGLTIKLKNVTNQASFQADVTQDFELLLG
                     GWGGDYQDPLTYLNLFLTNSPGNHTGFSDAKYDELVLGAKGKLSADPEKRWQALLEAE
                     QILLKDNAVLIPLYQGGRAYLQKSNLKNYTTYPIGSENYKWIEKN"
     gene            complement(22216..22830)
                     /locus_tag="U0308_001186"
     CDS             complement(22216..22830)
                     /locus_tag="U0308_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SdpI family protein"
                     /protein_id="HEM2316155.1"
                     /translation="MRKVGIFPSMIILFTVGISAVLYPLLPSEVAVHFGTDFSPDMFM
                     QKWLGLILIPFLMIMFTGTEYYGKEKVNQESLLEFEYCFRLLLVLLTIIQMSIIVYAL
                     GYDIPTGRFSLVTAGAFMFVVAAYIQYSKKLFKFLTMIGFKKIDAWSRNLLRKITTVT
                     LNIAGTICFILALFMRNDPSYLMLAMLMTMCVIVVGSGVYLNKK"
     gene            complement(22854..23486)
                     /locus_tag="U0308_001187"
     CDS             complement(22854..23486)
                     /locus_tag="U0308_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HEM2316156.1"
                     /translation="MKIAAFDIDAQKGFTPLCPDELPVSGGDKIVPELNFMASLASLR
                     IGSKDAHPQNAVWVVDSKDEMLAELEYPNADRTWVRHCEPGTKGFELLDGLPVVTDYD
                     YFIWKGMEPDIHPYGACYHDIVEQLSTGVLEYLREQKVDLVLVGGLAFDFCVKTTVIQ
                     LSRAGFSVLVYLPATRALSEQGFDETKEQLANTEKVQLIETREELVAYCQ"
     gene            complement(23487..24011)
                     /locus_tag="U0308_001188"
     CDS             complement(23487..24011)
                     /locus_tag="U0308_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEM2316157.1"
                     /translation="MSEKQVALYIAVSLDGYIADENGSVEWLESIDSEGDAGYEAFFD
                     NVDTVVMGRTTYQQIFSLTDTFPYSKKDVYVFSNTKAGTKDEYADFVAGTVDTWLNNI
                     DGEKIWLVGGAKLVQQFLKEKAIDRFVITIAPIILGKGIPLFEEDREHALELEEVTRF
                     GQFAQLTYKNLEEN"
     gene            complement(24014..25012)
                     /locus_tag="U0308_001189"
     CDS             complement(24014..25012)
                     /locus_tag="U0308_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HEM2316158.1"
                     /translation="MKAVGLTRASTDFVDIEIDKPVPENHDLLVRIKAISINPVDTKQ
                     REATKLSGDEVRILGWDAVGEVVDTGSEVALFQTGQDVYFAGDVTRQGAYAEYTLIDE
                     RLVGLKPHNLNVEEAAAMPLTTITAWEALFDRLTITENDKGKSILIINGAGGVGSIAT
                     QLAAHAGLEVIATASRPETVEWTKSHGANYVINHRENIPEQLEELGFEQGVDFILCLH
                     NTSAHWDEMQEAIRPQGKICSIVELAEPVKMTLLKDKSATFSYEFMFTRSKYDTTDKI
                     RQHEILTEAAHMLDAGELTTTLNQVLSPVNAATIEEAHKIISSGKMIGKLVVKGFE"
     gene            complement(25109..25381)
                     /locus_tag="U0308_001190"
     CDS             complement(25109..25381)
                     /locus_tag="U0308_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316159.1"
                     /translation="MEEQVDLGHFLKKTFIALVAVTLVFIGVLAMFTIIGVIIAIPLL
                     KKASKMLLSKKEASDHTHSHGGKLKIKCPACHAKMKFKDSELLDEK"
     gene            complement(25430..26341)
                     /locus_tag="U0308_001191"
     CDS             complement(25430..26341)
                     /locus_tag="U0308_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM2316160.1"
                     /translation="MAHNHDHAHGHNHNHAHNANKKSLFISFILIATFMVVEVIGGIM
                     TNSLALLSDAGHMLSDAVALGLSLAAFKFGEKAASSDKTYGYKRFEILAAFLNGLTLV
                     GISVFIFYEAIGRFFDPPQVIGAGMMTISVIGLLINILVAWILMKGDTSENLNMRSAF
                     LHVLGDLLGSVGAIIAALLIIFLGWNIADPIASVIVAALILVSGWRVLKDAIHILMEG
                     KPANVDTEEIKTFFQQQDGVKEVHDLHVWAITSDFNALTAHLTVCEDADRDKILADIE
                     HYLQENFSLEHSTIQLEGNHAHHHHCN"
BASE COUNT         7870 a         5527 c         4527 g         8467 t
ORIGIN      
        1 taatggtagt aaatccaccc attattaaat acataaaaat actgtgtacc tgatctgtgt
       61 accacggaat tttatttaat aattgtctta ttttgctcat aaaataactt ctttctatgt
      121 gaaatttttg atttattttt taaacatctc ttcttgtagt aactcataaa aagcttcatt
      181 attctccgtt ttcttcaaat aacgtacaaa tcgttctgaa atatctagtc catcgctttg
      241 tttcggcatc gctttgcgga ttttccagag ttgttcaaga cgctctttgg atagtagtaa
      301 ttcttctttt cttgtgccgg agcgacgcat atcgatagca ggaaaaacgc gacgttctgc
      361 aagttggcga tcaagatgta actccatgtt gcctgtccct ttgaattctt cgtaaataac
      421 atcgtccatt cgagaacccg tgtcaactaa tgctgtggca agaatggtta agcttccacc
      481 ctcttcaata ttacgagcag ctccaaagaa gcgcttcggt ctatggaatg cagcaggatc
      541 aatcccccct gaaagtgttc gaccacttgg cggaatcact aggttatagg ccctcgcaag
      601 tcgcgtaata ctatccatta aaatgaccac atcgcgtttt tgttctacta aacgcatcgc
      661 tcgttcaaga accagttctg ctactttaat gtgattttca ggtacctcat caaatgtgga
      721 actgacaaca tcggccttta cagaacgttc gatatcagtt acttcttccg gacgctcatc
      781 aattaacaag acaatcaatt ctgactctgg atgattagta gtaatcgcgt tcgcaatttc
      841 tttaagtaat accgttttac ctgcttttgg tggagctaca ataagtccgc gttgaccaaa
      901 accaattggt gaaatcaaat caatcgttct tgtggaaata ggatttttgc ctgtttctaa
      961 atgaatttga cgatctggat aaagcggtgt tagtcctggg aaatgcactc tttctttagc
     1021 cacttcagga ttttctccat tgacagcctc aacatggagt aagccaaagt aacgttcatt
     1081 ttctttcgga ggacgaactt ttccagaaac cttatcccca gttcttaact cgaaacgtct
     1141 aatttgggaa gcagagatgt aaatatcttc cgaactagat gaatagttga tagggcgtaa
     1201 gaagccaaaa ccttcatttg gaataatttc taatacacct tccatgaaga aaaatccttc
     1261 tttttctgcg tttgatttta ataaagcaaa aatcaattct cgttttgtta atttactata
     1321 gtaagtaatt ttgtgttctt ttgctaaggc atatatctct ttgattgtta aactttctaa
     1381 gtatgcaatg gacagtttag ccatatatgt accacctttt tgagttaata aatagtattt
     1441 aggaataaat gataatggag ggatttagag ggaaggctga aacgacttga ttcgttcagc
     1501 ctcatttttt ataattttgt ttctgctgcg ctactacgag taatatttgc gccaatagca
     1561 gataattttt caataatctt actgtaacca cgttcgatat gttccacccc gtgaatttca
     1621 gtttctccgt cagctaaaag tgctgcaatt acaagcgctg caccggcgcg taaatctgtc
     1681 gctgtcactt tagaaccttg aagttgcaca ggaccattta tgacagccga acgaccttca
     1741 agtttaaact taccgcccat tcgttcaatc tccgcaatgt gtttaaaacg gcttggataa
     1801 attgtatcag tgatgacact actaccttcc gcacgtgtta aaagagcagt taacggttgt
     1861 tgtaagtccg ttgggaagcc tggataagcg taagttttaa tatctacttt ttttattttt
     1921 tctacttccc caacaaaaat agcatcttct tcgatatcca ttggaacgcc catttctgtg
     1981 agctttgcaa tgattccttc taaatgggta ggaataacat tttcgattcg tactcccttc
     2041 ccagaagctg ctgcaagtac catgaatgtc cctgcttcga ttcggtctgg aataattgta
     2101 tgatgacaac catgtaaatg ctctacccca gtgattcgaa tagtatcagt tcctgcacct
     2161 ttaataattg ctcccatatt tgttaaaagc gttgcaacat caataatttc tggctctttt
     2221 gctgcatttt cgataaccgt ttttcctttt gcacgaacag ccgctagcat gatattgatt
     2281 gtcgctccaa cacttacaac atctaaataa atccgtgcac ctttgagttc atcggcacgc
     2341 aaataaatcg caccttgctc gttcgttact tttgcgccta atgcttcaaa accttttata
     2401 tgttggtcga ttggacgtgg ccctaagtaa caaccgcctg gaagtccaat aaccgctttt
     2461 ttaaatcggc ctaacattgc acccattaaa taataggacg cacgtaattt cttcacattt
     2521 cccgatggaa gtggcataga aatcatatct gttggatcaa taactgctgt tttattatca
     2581 tagcgaaccg tgccgccaag ctcttctaaa atattataaa gtgtgtgaac atccgaaata
     2641 tctggtaaac cttctaaaac cacttcagac tccgccaaaa ttgccgctgg aattaatgcc
     2701 accgcactat tttttgcgcc atccacttgc aaagtaccag ctaatttttt accgcctcga
     2761 ataatcaatt tatccgtcac aaatgtaccc ttctttcttg aagcatgtaa tactgtttca
     2821 ttatccatta atttgtttta ctttgcaaga aatgctttcc ctaaaaagct gggaacatta
     2881 cgtcccaagc ttttaatcat tgtggtatat ttttggctgg tgcttttgcg agtgctttga
     2941 tacgcggttt aatttttttc gaagctgtat cttttattaa taatgcgccc gccccgaaaa
     3001 cgatgcagct ataataagta ataatccgcc ataaaacaag tgccattagg agttttgccg
     3061 gaccgagtaa cataccgaat aacaaagtga aagtatactc agctccccca gccccacccg
     3121 gcgttggcat gactgtcgca aacataataa taaaagcatg atacgtaatc gccatataca
     3181 ggccaattcc tgtcacacca atcgcttgta aaataaagaa agggattgag aagtaaatcc
     3241 aaagttgcaa cgttgtataa aaacaacaac gaacaattaa tttccaatct ttaccaattc
     3301 ggctactttc ttcatggaaa gtaataattt tctcatctaa tgtatttctt aaattagaaa
     3361 ctttttcttt tttcataaat aaacgtgttg gtataagtaa aacgtgcact aattttgtcg
     3421 tgaacttttg gcttcttcct actaaaataa gcgcagcgat gacaataaca tgcacaccaa
     3481 accctagtaa aacaaggaat ttcaattgtg tcacgccagt cattaaataa tgaataccaa
     3541 aaatcaagat aactaaaaag ttcagtacga ccatcgcttg gtaaataatg aattttacaa
     3601 gtaagactga acttcctcgc cccgcatcca tgccttgctt cgtcaacata acgagttgcg
     3661 caggctgtcc gccagtcgcc attggagtaa tggtattaaa aaattggcca atcattgtaa
     3721 tccggaatga cgaaaaaaaa cgttggtcct tattcgctgg tttagatgca gtttgtaaaa
     3781 caaccgcttc taaaaaccaa taaataaaca ttgcagcaaa ggcagccgag agccaccaag
     3841 ggttcacttt taacatcgaa gcaaaaaaag tggagatatc tacgccttga aattgccaaa
     3901 taatgaagcc gatgctaatg gctaatacaa tcgcaatatt aaataggttt ttctttgcgc
     3961 ctccactcat tacctttcac tccttcgtta ataatccttg ataaaagtcc aaccatattt
     4021 cagccagtcg atcctctgaa taataagccg ctcctcgttt tgatgcttgt aacatttcat
     4081 tataataatt tgtatcattt tctaaacgtt cgatagccct aataaaacca gggttatcta
     4141 cttcttttac ataatagcca tctaaaattt cttcatacag atctaaattt cgtaataata
     4201 tcggaacatc acaactcatc gcttccaaaa tcgccattgg aaataattcg ttgtaagatg
     4261 gcataaagaa cacatctgcc atattaatac atgaattcat ttcagaacga tccacaattc
     4321 caatgaattt cacattactt ggtggattat catagatttt cttcaattcc tcgtagccag
     4381 aagtgatttt accaaaagaa aatccgcctg cccaaacaaa ttgaacatca ggaagttgtt
     4441 tagcaacctc aataaaatca agcacacctt tacgatgttg cacttgacca attccaatca
     4501 cggtaaattt atccgccgga atttcatatt ttgcccgagc aagttctttt tctccttttg
     4561 aaatggggaa aaagctcttt tttgaaacga aattcgggat ataatgaatt ttttctgctg
     4621 gaatattata agccgtaagt ttgggaataa aagagggatt tacaacaaca atctcatcca
     4681 ttcgtttata aaaaccaatc aaatatttat agaaaactac gcgggcaatc caaggtaatt
     4741 tgaggctccc ttccattgtt tcgggtaaaa aatggacata tccgacccga acgcctcgtt
     4801 tcttcttaaa aaaagtcgaa agaaaaaaac ggaaatcaac ggtatggtaa tgcgtgatat
     4861 ccgatttctc aaaactatta atcttcatat caatttcatt cttatatcgt tcttctagca
     4921 aattcacaag ttcgcggtaa gctgatgcca caccctgacc ttttactttt tctgccgaag
     4981 atagcattgt caacttaatc acgccgcgat gacctctctt tcctttgaac gtgtgtagaa
     5041 gatgatagtg aaaatacttg tgaagctatt ttacttttta tcagcgtggg ctttacttta
     5101 atcgtcccat tttggcgctt tactcggtat atttcacgaa cttcattgta tgtagattca
     5161 atgttgattc caaattgatc cgcagaaatg gattccactt ttactcggcc attcgtagcg
     5221 accaatgtgg ctgtattttt gtctgaaagt atatttatta acagtgatgc aagctcatca
     5281 tcttcattga ataaaaaggc tgtttctctg tcgcttaaaa agccttcaat actttcatca
     5341 cgtttggcaa caactggtaa agaagcggcc attgcttctg cataagtcaa accttgtgtt
     5401 tctgtcgttg aagcactcac aaacagatcc cctaattgat aatataaact aatattttcc
     5461 cagtctactg caccagtgaa aataacatga tctgctaatt gtttttcttc tactaatttt
     5521 tctaagtctt tgcgcacagg accatcgcca acaataacca atttggctgt ggttttggtt
     5581 tgaaggactt ctggcattgc attaataatc gcatcgatat ttttttcatg cgcaattctt
     5641 ccaagtgata gtatcactgg atcattttct ccaataccaa gtagtttctt caagtttaga
     5701 attcgctgtt tttcaactgg cgcgaacgat gaaatatctg tgcctgttgg aacagtgtac
     5761 attaatttgt ggataccttg ctcttctaag tgatgcctta cttttgcagt tggagtgatt
     5821 atggcatcat agctatcaca gaacgatttt gtcattttac ccaccataga aggtgtcaaa
     5881 attttacctt tcgcaatata atgcaagtaa tcgacataca ttgtgtggta ggtatggata
     5941 gatggaatat gatatttttt agcaattcgc ttacctaata gacctaatga aaactccgta
     6001 tgtgtgtgaa ttatatctaa atccaagcgc cctactagct taataaactt attcattcca
     6061 gcaattgcta cgcgacgttc tgggaaaaag acaaacggaa tacttggtaa acgaaacaca
     6121 cggccctctt cgctctctct atcagcgttt gggtcggttg ttgtaaatat atacacagtg
     6181 tgcccttgtt ttcttagttc gttttccata atcattatcg atgtagctac accgctaatt
     6241 tgcggactgt aggtatccgt aaaaatccct atattcatta ctatcgccta ctctcttcct
     6301 cgttggttca ttcatcattt aatatattat tataacataa ctatagtaag tcgtatcaca
     6361 taactaacta cattatggct catttattta gataaaacat gcgcctgaag catgattttt
     6421 tatcgggaaa tttagattga ttcagtctat taaatgaaag ctatagttat cataccatat
     6481 tagtcttaat aacgataatt aaattccctc tatactaacc ctcgcaatac ataaaaaata
     6541 actggtaaaa tcaacaagtg atcctaccag ttatttttat atcatcataa agttcgtctt
     6601 acgctttacc gttagaacca aactcttgaa ttttttctgt tacagttttg ataatcgcgt
     6661 ccacaccagg gccgattact ttacgtggat cataaacttt gtcatcagta gctaattttt
     6721 cgcgaacagc tgcagtccaa acgatttggc attcagtgtt aacgttgatt ttactgtgac
     6781 ctagttcaat tgcttttttg atttggtgtt caggaattcc agaaccaccg tgaagtacaa
     6841 gtggagcacc tgtaagttcg gagatttctt tcatttcgtc aaaaccaaga acaggttcgc
     6901 cgtggtaagg accgtgaaca gaacctaatg ctgcagctag tgcatcaatg ttagcttctt
     6961 taactacacg taaacattct tgtggatcag catagttgat tccgccagta actccgtctt
     7021 cgtctccacc aacagttcca atttcagctt caacagatac gcctttagca tgcgcatagt
     7081 caacaacttg tttagtcatt gcaatgtttt cgtcgattgg gtggtgagag ccgtcgatca
     7141 ttacagaaga gaatcctgca tcgatagccg ctttacaaga atcaaagctt gaaccatgat
     7201 caagatgaat cgcaacaggt acagtgattt tcaggtcttc tacaagtcct tcagtcattt
     7261 ttacaactgt tttgaatcct cccatgtatt tagcagctcc ttcagaaact cctaaaataa
     7321 ctggtgcttt ttctgcttct gcagctttca aaatagcttg agtccattca aggttgttga
     7381 tgttgaattg accaacagca tattttccag ctaatgcttt tttcagcatg tctgtcatgt
     7441 taacgatagg cataatacaa tttcctccct caggaattta ggaaaaccat tttgattttc
     7501 cctaagattt gaatttccgc cgtgaaaaat agtggcagct attttcccct aacaaacata
     7561 tgataacaga tttgtgatga atttaccata aaaactagaa aattttctag tgtaaacgct
     7621 ttagcctcta agacgggaag aaatccgatt tgtatcagca aatacttcta atgcttctgg
     7681 gattacctct aatgtatacg gtgcttttcc tccatataca ccatcatagc taacatttaa
     7741 atctgcttcg ctgtttatag taactttatt tgttcgcgca tggattacat gcggactact
     7801 taagtgtgta ccctttttta tagaagcaaa taattgaaat aatgttttag gagagacttt
     7861 ctttaaaatt aataactcaa acattccact atttaattca gcaggaggac acaatgtctc
     7921 cataccaccg accgagttgg acttatttac aaaaaacagc aaaatctcac ctttaaatat
     7981 tttatcgtta tatgcaattt cgacgtacac tggtgatagt tttggaagaa cagttaaacc
     8041 gctaaacaga taagcaagtc tgccccattt ggatttcatt gattctttta cagcataagt
     8101 tatttcggtt attttcccac cagctgcgtt attaatgaaa aattcggtct cattggcttt
     8161 accgatatcg acacgaattg tttcttgctt ggctataatt cgaagtgctt cgagtggatt
     8221 tttagcaaaa tttaacgctc tcgcataatc attcgtcgtt ccaaccggta acactcctag
     8281 tttcggtggg gtatcaactt gcatcaaccc attaacaact tcatttactg taccatctcc
     8341 acctgctgca attacaacat caaaaccggc ttctgcagct tgtttggcaa taaatgtagt
     8401 acttttaggt gctggagttg atgggactaa agttacttca aaatctgctt ctgttaaaat
     8461 tttttctgca tccggaagta attttctaaa cttattttta cccgctgccg gattgtatat
     8521 tatcatcgct ttcttttgca aattgccgct ccctctttcc tatatatata atttagtttc
     8581 ctattttggc cttaggatgt caacttgttt gactgaaaga aaacgctagt taaattgaag
     8641 ggctttttac ctattacaat tcacatacat taaattagtt aaaattacat tttgggacac
     8701 catatcgaaa ttttattgct tttacagaaa aaaacatacg taaataggtt cattgttacc
     8761 aatatccatt gactacaacc aggcgtgttg tcataattag aaatagaata cttttattta
     8821 atataaaaag tagtgcagtt aggagaggat ttaaactttg aaaaaattag taaaatcggc
     8881 ggttgttttt gcaagccttg tttttattgg cacctccgct actatgatta cagaaaaagc
     8941 aagtgctgct tccattgatc cggtgcaaaa agcagatggt caagctactt atatccccaa
     9001 aggagttaga gatgggactg caacggaaga acatgacggc tttgaagatg gaactaatag
     9061 cgtactacag caagtccctt tgcttcgcgc aacaacagga taccctgatg ttaatgccta
     9121 tattaaatca aacaaatttt caacagcaaa aatagaaaaa caattaaaaa gccaatttcc
     9181 taaattcaac tatcgtaatg gttacggcaa accagaagga atagttattc atgaaacagc
     9241 aaataattca tctactatta caggtgaaat caattatatg agtaccaact acaacaatgc
     9301 ctttgttcac gcttttgtag acaagtctcg tataatccaa atccatccta ctgaaaatgg
     9361 tgtttgggga gcaggacaat atgctaatgc tcgttttatc caagttgaat tagttcgttc
     9421 gaagacattc gatgaatttg ctcgttctat taataactat gcctattatg ctgcgtacct
     9481 tttagatcaa tataaccttc ctgttgatag cgcgcacagt gacggcaaag gaacagtctg
     9541 gtcccacgat gcagttacac gttatttagg cggaacaacc catactgatc ctgtttctta
     9601 tttcaaccaa tggggttata atttcaatag ttttgttaca ttgattaatg aaaagtacaa
     9661 agcgattcaa gctagcaaag ttacttacga caaaatcgaa tacgataaag gcgtcacagc
     9721 ctacgctaga gttaaaactg cacctggtaa tgcagtttgg acaaaacctt acagaacaga
     9781 aggctcgaaa ctagttaatc aactttctgt ctaccaaggt aaaaacatgc ggatcttgcg
     9841 tgaagctaaa acaccaatta ctacttggta tcaattcagc attgacggga aagtaatcgg
     9901 ttgggttgat actcgtgcac tcgatacgtt ctacaaacaa agcatggaac aaccagctaa
     9961 tttaactcgc tatgtcgctt ccaacaaaac tggtgaggcc tactacaaag tacctgttgt
    10021 tgatgcggat gtcaaatggg gcactttagc tgcttataaa gatcaaaaac taaccgtgga
    10081 taaacaagca acggtggaag ggcaactttg gtatcgcgtt agaacaagca ctacctttat
    10141 tggttggacg aaagcttcca acttaacagc tacctctcca tttgataaga ttgaatacga
    10201 taaaggtgtc acagcctatg ctagagttaa aactgcacct ggtaatgccg tttggacaaa
    10261 accttacaga acggaaggct ctaaacttgt caatcaactt tcggtctacc aaggcaaaaa
    10321 catgcggatc ttgcgcgaag ctaaaacagt aattactacc tggtatcaat ttagtattga
    10381 tgggaaagta atcggttggg ttgatactcg tgcactcgat acgttctata agcaaagcat
    10441 ggagaaagat actaatttaa ctcgctatgt gattgcgaac aaagtaaacg aagcgtacta
    10501 caaagtgcct gttgtggatg cggatgttag atggggcact ttagctgctt ataaagatca
    10561 aaaactaacc gtggataaac aagcaacggt cgaaggacag ctttggtacc gcgttagaac
    10621 aagcactact tttatcggtt ggacaaaagc ttcgaactta acaacaacta cgccatacga
    10681 taaaattgaa tatgataaag gcgccacagc ctatgctaga gtaaaaactg cgccaggcaa
    10741 tgccgtttgg acaaaacctt acagaacgga aggctctaaa cttgttaatc aactttcggt
    10801 ctaccaaggt aaaaacatgc gaatcttgcg cgaagctaaa acagtaatta ctacctggta
    10861 tcaattcagc attgacggga aagtaatcgg ttgggttgat actcgtgcac tcgatacgtt
    10921 ctataagcaa agcatggaga aagatactaa tttaactcgc tatgtgattg cgaacaaagt
    10981 aaacgaagcg tactacaaag ttcctgttgt agatgcggat gttagatggg gcactttagc
    11041 tgcttacaaa ggtcaaaaac taaccgtgga taaacaagca acggtcgaag ggcaactttg
    11101 gtatcgaata agaacaagct ccacctttat tggttggaca aaagcttcga accttagtgc
    11161 tactaaataa taataataaa aatctcccag ccaattatgg ctgggagatt tttattatta
    11221 ccttatttat tattaagtgc agcgccaaca aaatctttaa acaagctttg cggacgattt
    11281 ggacgagaaa tgaattctgg gtgatattga caagcgacaa accaaggatg atcagctaat
    11341 tcaactactt caactaaacg accatctgga cttgttgcag aaacaatcat accagcttct
    11401 tccatctgct ctctatattc gttattaaac tcataacgat gacggtgacg ctcttcaaca
    11461 agagttgtac cataagcggc ctcggcttta gtaccttgct taatacgcgc tggataaagt
    11521 cctaaacgaa gtgttccgcc catgttttcg atgttctttt gttctggtaa taaatcaatg
    11581 atgttatgtt ttgtttctgg ttcgatttct gcagaatgag ctccttcaag accaagaaca
    11641 ttacgggcaa attcaacagt tgctagttgc attcctaaac aaataccaaa ataaggcact
    11701 ttgtttacgc gtgcatattc aatagcagca attttacctt caatggcacg gtcgccgaaa
    11761 ccaccaggaa ctaagatacc atcaacgtct ttcatgattt cagcaacatt ttcttttgtt
    11821 actttttcgg aatcaatcca gtcaatttcg atttctgcat catgatcata tcctgcatga
    11881 cgaagtgctt ctgctacaga aaggtaagca tcttgcaagg aaacatattt accaactagg
    11941 ccaatacgaa cttttttgga aagatttttc acacgatgta ctaagttttt ccaatccgtc
    12001 atttccgctt gtggtgcttc taattgtaag tgctcaagga cgatatcatc cattttttgt
    12061 ttttgtagag aaagtggtac gttataaagt gtttcttcat cgcgagattc aataacctcg
    12121 gaagctttaa tatcacagaa tagcgcaatc ttatctttca tttcttgtga aactggctgc
    12181 tctgtgcgaa caacgataat gtttggttga attcctaagc tacgaagctc ttttacacta
    12241 tgttgtgttg gtttagtttt catttcgcca gctgctttga tgtaaggaat taaagttgtg
    12301 tggatataaa gtacgttttc tgcaccaaca tcacttttaa tttggcgaat tgcttctaag
    12361 aatggtaaag attcgatatc cccaactgtt ccaccaattt cagtgatgat aatatctgaa
    12421 ttggtcatgc gcgctgcacg gaaaacacgg tcttttaatt cgtttgtaat gtgtggaata
    12481 acttgcactg ttccacctaa gtaatccccg cgacgttctt ttttaataac ttccgagtaa
    12541 actttaccag ttgtcacgtt gctgtattta tttaagttaa tatcgataaa acgttcgtaa
    12601 tggccaaggt ctaggtccgt ttccgcgccg tcatctgtca cataaacttc cccgtgttgg
    12661 tatggactca ttgttcctgg atctacgttg atgtatggat caaatttttg aatggttaca
    12721 ctaagtccac gatttttcag caaacgtccg agtgatgctg ctgtgattcc ttttccgatt
    12781 gacgaaacta cgccacctgt aacgaaaata tactttgtca tgttaaaaaa atctactcct
    12841 tcctgaaatg aaaaacttgc agggtctgac gattttcctg ctggggtggg aaattgccag
    12901 ataaaacaat attgtgatta tctctctagc acacaaatca caatttcaag tattttgtaa
    12961 accaaaataa aaaacactcc gcctactttt aaaagtaagg gagcgctgat tctcataaat
    13021 atccgtccct ataaaaggga gcccaaataa aatactacta atgatggcga tagaagtcaa
    13081 gtctttattt tatgaaaccg ccatcaatcc attaagtagg ctaaaaaaaa tcagacagac
    13141 acttttccac aaaaatggac gcatctatct gattaaaatt agttattatt tatcttctgg
    13201 gtcttctgta taatccccgt ccgtataatc atcttctaca gttgctaagt cgccttcgat
    13261 tccgtctggc aagtgatcat cgtcatcttc gtcttcatca agtaagacat ctgcaagaga
    13321 aatttcttct tcaccaagct cttccacgat ttcttcatca tcgtagtcca cgtcatcatc
    13381 caagatttct tcatcttcat cgtcatcatc gtctgattta cgttttttct tcggtgttgt
    13441 ttgtgtttga acttcttcat caatcgcatc cattggatac catgcacgaa gtccccacgt
    13501 gttgtttcct agtgaaataa agtttccatc aatattcata tctgtataaa attgaacaag
    13561 acgctccctt atttctgcat ctttcaaacc taggaacgct tgaatctctt tcactaattc
    13621 agggaaaaga atagtttctt tccgctgttc caaaataaaa tgtgcaacat caattaaaga
    13681 tagttcacta cgttcttctt gcgttaagtt ctttaaatcc aaaactggca cgccctttct
    13741 atcgtaattc caatttattt agctgttatt ttttcgttca gcccaacttc actattttac
    13801 atgttatttc tggcaagtac aacctaaatt ttcttaatta catcaattct tcttgactat
    13861 ttgatatccg atgtaaaaga aaaggatggc cattaaaaga attgggattg atccaagttg
    13921 aaagtcgtag agaatataga ttgcgacgca cagaaacacg aaaagcagcg ccaaaattat
    13981 taatcgcttc atcatatgct ctccccgttt tttcaattac ctatgtttct attaacttta
    14041 gtacattttg gttatgacgt caacgagtaa cctataaatt taggatatca cattttttct
    14101 ggtgctgata cacctaaaag cgtcaaacca tttctaaggg taatttgcgc agtcttaata
    14161 agtgctagtc ttgcttttgt tacttctaaa ttatccatat caagtacttt attgctattg
    14221 tagaaacggt ggaaggaaga cgctaaatca tttaagtagc gaacgatacg gtgtggcgct
    14281 ctttttgtag cagcttccgc aacaacatcc gcgaactcac ctaacacttt taataaatca
    14341 tattctgctt ctgtttgcag taagctcatg tctgcgtctt ttgttacctc tagaccttgt
    14401 tctttaccag aacgtaaaat gctagaaatt ctggcgtgcg catattgtac ataataaact
    14461 ggattatcat tagatgtaga tttcgctaag ctcatatcaa agttcatatg tgtatctgaa
    14521 ctacgcattg caaagaaata tcttgttgca tccagtccaa cttcttcaat taagtcacgc
    14581 attgtaactg atttaccagt acgtttactc attttaactt gaacaccgtc ttcaaataag
    14641 tgaactagct gaatgatttc tacttctaat tgatttggtg agtagccaag cgcttcaatt
    14701 gcagcacgca tacgaggaat atagccgtgg tgatcagctc cccaaatatc aattaacaca
    14761 tcaaagccac gctctaattt gtttaagtgg tacgcgatat ctggtaagaa atacgtataa
    14821 ctaccatctg atttgattaa aacacggtct ttgtcatctt caaaatcagt cgttcttaac
    14881 catgtcgcgc catcttgctc ataaatatag ccattttcgc gtaaacgttc taacgctggt
    14941 aatactttat tttcttcgta taaagaagtt tctgagaacc actcatcaaa ggaaacgcgg
    15001 aattcttcta agtcagcgcg taattttcct gtttcaaacg ctaatgcatc tacacggaaa
    15061 acggaacggc gctcttcttc gcttgtgtgc acatatttat cgccgtattt agcagctaaa
    15121 tctttcccaa gcgaaataat atccgcacca cggtagccat cctctgggaa ttcagaatct
    15181 aaacctagtg cttcaaagta acgcgcttct gctgaaagaa ctaaattatt aatttgattt
    15241 ccagcatcat taatgtagta ttctcttgaa acatcaaatc cggccatttt cataatattt
    15301 gctaacgagt cgccaattgc tgcgccacga gcatgtccta aatgcaagtc accagttggg
    15361 ttcgcggaaa caaattcaat ttggaatttt tctcctttac caaaatcaga ctctccgtat
    15421 tttttatctt cggttaaaat cacaggaact aaatcagtta aataagcatt atctaggtag
    15481 aagttgataa aacccggccc agcgatttct acttctttaa ttaatttgtt gtcttttttt
    15541 agttctggaa cgatactttc ggcaatttgg cgaggggctt tcttagctac tctagcaagt
    15601 tgcatcgcta tattagtcga ataatctcca tgctttttat cttttggtac ttctagtaaa
    15661 atttctggta cttccgcttc ttctaaacca accgcttgaa caactccttg tttgatatgt
    15721 tcaattaatt tgatttggtt ctcttgcatg acattcattc tgcgtcctcc tctattttca
    15781 ttaaaacagt atatgagcca atgtattcgc cgtggcttag caaatcatat tgaaatgcga
    15841 cttcactcag tacatcaggc ttattttcat atagttcttc cattgatact agttctgatt
    15901 ctaattgtaa tttccctgct ccggaatcaa cagacgcagt acttctccta ttatctcgga
    15961 aaaagtgcat tctcatattt acggcaccac ttctcattaa aagtagttcg ttgtcagcaa
    16021 tttttagaac cgtacgaatt gttccagcta attgtttttc ctcataatgc agataacgat
    16081 tgcctttatc gcggtaaaaa acacccgaaa cagacatatc ggatttctct tctgcatcca
    16141 tctgacggat gacattggtg atatgaatag ttactttttt tcgttccatt tggttggcag
    16201 tcatatcgct tatttacccc tttccggtca gaagaataga cgcattatat tatagtgaaa
    16261 aataacatga aaagcaacag gttaaaatga tgtcagacca aatattgtca aaatcacatt
    16321 taaaacaaat ggaataacgg tattaaaaat tggttgaatc gtaaattctg aaataggtgt
    16381 taatgcaact actaagaaaa taagcatcgc atagcgttca agtggttcca gcttagacct
    16441 ggttgacatt ggcagaaact ccactagtat ttgataccca tcaagcggcg gtagcggaat
    16501 caagttaaac acaaacaaga ctagatttaa ttgcacaaaa atcattaaaa aagtttccgc
    16561 aacggagcca tatgtaaaga aggaataatt tagaaataaa gcatataacc ccacaccaac
    16621 catcgcaagt agtaaattac ttactggtcc tgcaagcgaa acaagtatac ttccaaggcg
    16681 gcgttttttt aatttaaatc gatttaccgg ggtcggctta gcccaaccaa agcctgcaat
    16741 taatatcatt agcaaaccga ataaatcaat atgtacaacg gggtttaaag agagtctccc
    16801 ctcattttta gctgtatcat ctccaaatgc gagagcaacc aaggcgtgtg cccattcatg
    16861 aatagtaaaa gcaattaata atgtaactaa aacatacggt atcatttcga gtggatacgc
    16921 gagaaaacta ggcataggag cctcctttat cttttattga gcaattttta tatgctataa
    16981 tgaaaaaaac gttgatcgag gtgagaaaat gccatttgtt accattcaat ttttagaagg
    17041 tcgtacggac gatcaaaaga aagctttagt tagcgaagtg acggaagttg ttgccaaaaa
    17101 tctaaaagca ccaaaagaaa acattcatgt gattttagaa gaaatgaaaa aaacggatta
    17161 cggtgttggc ggcgtaagga aatctgatat ttaagtgtgt aagaagcaag gcatttcgcc
    17221 ttgctttttt atttttcctt taacgaatgc gcatggatga gggcgatcat tctctcggtg
    17281 attgcttctt ccacgtgtcc actttcgata aaatcgagcg gataatataa tttaatatcg
    17341 gtccggcgct ctcgaccaat cgcctcaaca accggagact cggtcgataa ctcacgcaat
    17401 tccccatttc ccatcaatag tttaattggg tctttgccac ttcccactcc aggaagatag
    17461 taatcataag gtaaatcgct ggaagaatca attactaaat aataagacgg atcaatatcg
    17521 gccttttcaa gaagtccttt tagttctgcg taaagttctg catcttcttt cggatcgtag
    17581 ttaatgtatc gtagcaatct tctattcaaa aagcgactac ataaatcact caaaatcgga
    17641 tcttcttcct cttgccaaat agaaaaatag tacatcaaca caatatcatc aagcacaata
    17701 taatctttta aactcacttc atttaaaaag aatggtagca cttgaatagg ggtagcttga
    17761 aattcatatc cagcacaata taactttttg gcacgctcaa ggattttcca taatagcact
    17821 tcaccgctac gactaactgg atgaaaatac acttgttgat acatttgata acgactcata
    17881 atataatctt ctaccgcatg catgccagaa tattttacaa taacaccatt gccatctggg
    17941 cttgggcgta gaactcgcaa aatccgctct aaatcaaact ttccatagct cactccagta
    18001 taataggcat ctcgcagcaa ataatccatt cggtcagcat caatctgact cgaaatcaac
    18061 ttcaccaatg tttgattcgg ataatttttc ttaataatag cagcaacttt aagcggaaat
    18121 tcttctcctg ctctcatcaa tattttatta acttccgtat ctccaataat tatctcttgc
    18181 gtgtatgatt catggtccgt tccaaatact ttttcaaaag cgtgagaaaa tggtccgtga
    18241 cctaaatcat gcaaaagcgc tgcacacaat gccaccatgc gctcctctgg atccagttgt
    18301 ggttcattcg caaatgtgac atcgattatt tgccgaacaa tttcgtaaac gcctaacgaa
    18361 tgattaaaac ggctatgttc cgccccatga aaagtaagtg aagttgtccc caattgatgg
    18421 atacgccgca aacgctgaaa ctcttttgta gcaatcaaat cccaaattat cttatcagaa
    18481 acatgtacat atccatgaac cgggtctttg aatactttct cttcccttag tttctctgtt
    18541 aaataactca tacaacctcc tcctctcaag taagcacttt atcatttcgg gcaattaaac
    18601 gttcataata ggctgggaaa agatctaact cttcagacgt aagcgtacca gatacaagct
    18661 cacctgcgta atgccgcaaa ctgttgaaaa ggcgtactaa cgttccattt aaacttatat
    18721 catttttcat taagtccgaa agcgaaccca taacattcgg attcacatct ggaaaagtat
    18781 attttgtttg ctttgctttt ccgctaatcg tatagaaatc gcggatcagt tctgagcgag
    18841 tagtttgatc cccatcaata gctaaataaa tttggaccgc tacccctttt gccattctac
    18901 gctgagaaat accagcgaat tttttccctt gaatactaag gtcgtaacta ccaggacaat
    18961 aagagtcttc tatttctttt gcttcaatta cctcattaca atctacgaac atgtctttga
    19021 taagcgtaaa catcgtttca taaccacgct caatcgcaat tccgcgttct gcatctggga
    19081 gcaccataga caaattaagt acccctgaat caaggacaac tgctaaacca ccggaatttc
    19141 taactacaac acggtagcct tgttcttgta aaaaggcaat tcctttatct atatcaggca
    19201 acttagaatc ttgaattcca agggaaactg ttttttcatg cacccagccg cgaacagtag
    19261 atggcgccat tcttgctccg accgagcgac atagcgtatc atctgtcgca aatgattgaa
    19321 tggcatcgaa agccggatta atcgttgtat tatcaataaa tcgccacaca tcttgtttta
    19381 gtaaggtgtc ttctatattc atctctatgt cctccatgat tttctttttg ttattatagc
    19441 ataccgacag caaaattaga tgcaaatggc ttaaaatagc catttaatca tgaataacaa
    19501 tttttgagcg gttatttgac ttttttacgc ttaatgttga aaactatggc tgtaatgatt
    19561 gatataacaa ctgatttgag aattatatct tttttcattt tcatcgcctc atttcctcct
    19621 cttattataa caaacttacc atacaaaaaa acctaacttc tgtaaaagaa attaggttca
    19681 atatatctaa aagcctaggg agctttttta gcaaatgtat taccagttgt agcggtcttc
    19741 attgtcgcgg ctcgagcgtt ttggagaatt accccacata cgataaagca gatatccaat
    19801 accacctagt ataagtactg ggaataagaa gtgaagcgtg attccaacga tatcaagtac
    19861 gatattaagt gcgataaatc ctaaaataac tgtaaaaaat attttccaaa aactattcat
    19921 gattttttcc tcttttctaa ttttatttac tacttgcaag tggaacactg tttatttcct
    19981 tggcttggac gagtaattca ttgtcttgaa cgacgatttt gtactgttta ttctttttaa
    20041 gttgtgttgt tgacatgaag ttaactttgt gactgtttcc ttgattatct aaacacgatt
    20101 cccggaatga gtacccttta aattttgact tggtaacttc ttttccatcg tttttgattg
    20161 taacgtaata tgtatttgct gccgatccaa ttggtgctga aaattcaatt acaaccattg
    20221 ttaatacaaa aattgcagcc agtaaaccga aaagtccctt tttcattgtt tttaccgtcc
    20281 ttttttgttg ataggtttat tatagaggag atcaaaaaaa ggaacgaacg gctctaggct
    20341 gaaaattggt acatcctaag tcttattttc tttcgggtat aaaaatagag cctagtttgg
    20401 ttaactagac tcttttaaat taattttttt caatccattt gtagttttct gaaccgattg
    20461 gatacgtggt gtagtttttc aggttgcttt tttgcaagta cgcgcggcca ccttggtata
    20521 gcgggataag cacggcgtta tctttaagta aaatttgttc tgcttctagt agtgcttgcc
    20581 atcttttttc tgggtctgcc gaaagtttac ccttggctcc taggactaat tcatcgtatt
    20641 tagcatccga gaagcctgtg tggttccccg ggctgtttgt taagaatagg ttgaggtatg
    20701 tgagcggatc ttgataatcg ccaccccatc cacctagtaa cagttcaaaa tcttgtgtca
    20761 catctgcttg gaaactcgct tggtttgtga cattttttaa tttgattgtt agtccaggca
    20821 gattttcttc taattgattt tggataaatt ctgtttgttt gcgttgcaag gacgtgtcgc
    20881 cacttgttaa cgtaagtgtt aattcggttt tcccgatttc tttcaagcct tgcttccatg
    20941 cgtttgtagc ttcttgttgg tcaaacttga gtaagtcgcc gttttgttta cggaaatcct
    21001 cttttgtctc tgggtcaaac atgatatcac cgggaacatc cccgtttaat gctttagatc
    21061 catttgcaag tagtgtattg accatgccag tcttatcgat agccatcgct aaaccgcgac
    21121 gtaagtttaa gttagctaaa tccgttttca cgccatcttt gccttggttc attttcatat
    21181 aaacagagcg tccagttgct tctttatgga agtttttatc atctttgtat tgtttaacaa
    21241 attcaccatc aagctctacg cggtccaatt tatttgtatt gtataagttt aaagccgcat
    21301 tagtatcttt tacaacagtt acatggattt ttttagttgg aacgttcttt ttatcccagt
    21361 aagtaggatt tttaacgtaa tcccatgtca tatttgttcc attccaattt tctaatttat
    21421 acgggccgtt ggaaatcaat gtgtcgcttt tagtcccata acggtcacct tgtttttcta
    21481 caaacgcttg gttttgtggg aagaacgtgc ccgtcgttag gagttctttg aatattggca
    21541 ccgggttttc tagttcgatt tgtagtgttt tgtcgtctaa cgctttgatt ccaagttcat
    21601 ccggtgacat ttcacctttt aaaatttggg tagcattttt gacgatttcc tccatttgcg
    21661 gtccgtatgc agcggctgtt tttggatcca ccactttttt ccaagcgtat tcaaaatcat
    21721 gcgccgtcac tgggtcgcca ttggaccaat tagcatcttc gcgaatttta aaaataagtg
    21781 ttttcccgcc atctttttct tcaggttcac tggcagctag agcgagtgcc ggtttcccgt
    21841 ttttatctaa tcgatataat ccttcaaaaa tttgattgat tactcggaaa cttacgctat
    21901 tgtctgcgag tgttggactt gcattcggaa ttccactcgt ttccatgatg ttaaccactt
    21961 tggatttctt gtcggatgtt actttttcat tttccccttt attgccagac tgacatgctg
    22021 taagtgctag taaacataat aaactgagtg ccactaccat ttttctggct gttttatgca
    22081 atatttctcc tcctcttttg taagcgcttt ttgattacgc aaaaaaatga cggacttcct
    22141 gccaaattcg cgcagaactt ccgccaccat tataaaccga aactgtatca attgtaaata
    22201 aaaactgtta tatttttatt tcttattaag gtaaactcct gacccaacaa caataacaca
    22261 catcgtcatc aacattgcta gcattaagta actgggatca ttgcgcataa acaaagcaag
    22321 aataaaacag attgtaccag ctatattaag tgtaacagtt gtgatttttc taagtaggtt
    22381 tcttgaccat gcatcgatct ttttaaaacc aatcatcgtt aaaaatttaa agagtttttt
    22441 cgagtattga atgtaggccg caacaacgaa catgaatgct cctgctgtga ctagagaaaa
    22501 tctaccagtc gggatatcgt aacctagcgc gtatacaata atactcattt gaatgattgt
    22561 taacagcact aacaacagtc taaaacaata ttcaaattcc aacaaactct cttgattcac
    22621 tttttctttt ccgtaatatt ccgttcccgt aaacataatc attaaaaaag gaatcagaat
    22681 taagccaagc cacttttgca taaacatatc tggggagaag tccgtaccga aatgcaccgc
    22741 cacttcagaa ggtagtagcg gatataacac agcagaaatt cctactgtga aaagaattat
    22801 catactagga aatataccaa ctttcctcat tcccctcacc tcttccaata taattactgg
    22861 caataggcga caagttcctc ccttgtttcg ataagttgca ctttctcggt atttgctaat
    22921 tgctctttcg tttcatcaaa accttgttca gatagtgcac gtgtcgctgg taaataaact
    22981 aatacagaaa agcctgccct acttaactgt ataaccgtag ttttcacaca aaaatcaaaa
    23041 gctaaacctc caacaagaac taaatcgact ttttgttccc gtaaatattc tagaacacct
    23101 gttgaaagct gttcaacaat atcgtggtaa caagcgccgt acggatgaat atccggctcc
    23161 atacctttcc aaataaagta atcataatca gtcacaactg gtaaaccatc taataattca
    23221 aaaccttttg tacctggttc acagtgcctt acccaagtac ggtctgcatt tggatattcg
    23281 agttcagcca gcatttcgtc tttggaatcc actacccata cggcattttg cggatgggcg
    23341 tccttactac caattcgaag agaagcaaga cttgccataa aattaagttc tggcacaatt
    23401 ttgtctccgc ccgaaaccgg taattcatcg ggacaaagcg gcgtaaaacc tttttgtgca
    23461 tcaatatcaa aagcagcaat tttcatttaa ttttcctcca agtttttata cgttagttgg
    23521 gcaaactggc cgaaacgagt tacttcttct agctctagcg cgtgctctct atcttcttca
    23581 aagagtggaa ttccttttcc taaaataatg ggcgcaatcg ttatcacaaa ccgatctatc
    23641 gccttctctt ttaaaaattg ttgcactaat tttgcgccac ctacaagcca gattttttca
    23701 ccatcaatgt tattcagcca tgtatcaaca gtcccagcta caaagtcagc atactcatct
    23761 tttgtcccag ctttcgtgtt ggaaaaaacg tagacatctt ttttactgta agggaacgtg
    23821 tcagtaagcg agaaaatttg ttgatacgtc gtccggccca ttacaactgt atctacgttg
    23881 tcaaagaaag cttcataacc cgcatcccct tcactatcaa tagattctaa ccattcgaca
    23941 cttccgtttt catctgcaat ataaccgtcc aaactaaccg cgatatatag cgcaacttgt
    24001 ttttcactca ttattactca aatcctttca ctactaattt tccaatcatt tttccggatg
    24061 agataatttt gtgagcttct tctattgtcg ccgcgttcac gggtgataaa acttgattta
    24121 atgtcgttgt taattcgccc gcatctagca tatgagctgc ttctgttaaa atttcatgct
    24181 gtctgatttt atctgttgta tcatatttcg aacgagtaaa catgaattca tagctgaaag
    24241 tagcactctt gtcttttaaa agagtcattt tcactggctc tgcaagttct acaatagagc
    24301 aaattttccc ttgtgggcga atcgcttctt gcatctcatc ccagtgagca ctcgtgttat
    24361 gcaaacataa aataaaatca actccctgct caaatccaag ttcttccagt tgttctggga
    24421 tgttttctcg gtggttgata acatagttcg cgccgtggct cttagtccat tctactgttt
    24481 ctgggcgtga ggccgtggcg atgacttcaa gaccagcatg tgcagctagt tgggtcgcaa
    24541 tagaaccaac accaccagcg ccattaataa ttaaaattga tttaccttta tcattttcag
    24601 taatagttaa acgatcaaac aatgcttccc aagctgtaat agttgtcagt ggcatcgcag
    24661 cagcttcctc tacgttcaag ttatgtggtt tcaaaccaac taaccgctca tcaattaaag
    24721 tgtattctgc gtacgctcct tgccttgtga cgtcacctgc gaaataaacg tcttgcccgg
    24781 tttgaaataa tgcaacttca ctcccagtat ctactacttc tccaaccgca tcccaaccta
    24841 aaatccgtac ttcatctcca gatagcttcg ttgcttcacg ttgtttagta tctaccggat
    24901 tgatggaaat cgctttaatt ctaactagta aatcatggtt ttctggtact ggcttgtcga
    24961 tttctatatc cacaaaatcc gttgacgctc tcgttaatcc tacagctttc atttgacaac
    25021 acctctcgtt tccttttccc gaatttctta aaataatgca catttagata aaaaagcctt
    25081 ctcaaactca ctgagaaggc tttaaaactt atttttcgtc gagcaattcg ctatctttga
    25141 atttcatttt tgcatggcag gccgggcatt tgattttcaa cttgccaccg tgtgaatgag
    25201 tatggtcgct agcttctttt ttggaaagaa gcattttgct agcttttttt agtagcggta
    25261 tagcgataat tacaccgatg attgtgaaca ttgctagaac cccgataaac actaaggtta
    25321 cggcaactaa agcgataaaa gtttttttca aaaaatgtcc taaatcaact tgttcttcca
    25381 tctaaaccaa ctcctctaat tgatacttta atcatatcat gaagcggcat taattgcagt
    25441 gatgatggtg agcgtgattt ccttcaagtt gaatcgtact atgttctaat gagaaatttt
    25501 cttgcaaata atgctcaata tctgccaaaa tcttatctcg gtcggcatct tcgcatacgg
    25561 tcaaatgagc tgtaagagca ttgaaatccg aagtaatcgc ccatacatgt aaatcatgca
    25621 cttctttgac accgtcttgc tgttggaaaa acgttttgat ttcttctgta tccacattcg
    25681 ctggttttcc ttccatcaaa atatgaatcg catctttcag tacacgccaa ccactaacta
    25741 agataagtgc cgcaacaata acactcgcaa tcgggtcagc gatattccag ccaaggaaaa
    25801 taatgagtaa cgcggcaata atcgcaccaa cagagccaag caaatctcca agcacatgca
    25861 agaacgcact acgcatattc aaattttcgc tagtgtcacc tttcattaaa atccaagcga
    25921 ccaaaatatt aataagcaat ccgataacag aaatagtcat cattccagct ccaattactt
    25981 gtggcggatc aaagaagcga ccaatcgctt catagaatat aaaaacagaa atcccaacga
    26041 gcgttaatcc attaagaaat gcagctaaaa tttcaaatct tttatagcca tatgttttat
    26101 cggagcttgc tgctttttcg ccaaatttaa atgcagctaa acttaaacct agcgccacgg
    26161 cgtcagagag catgtgcccc gcatcagaaa gtagcgccaa actattggtc ataattccac
    26221 caataacttc gactaccata aatgtagcaa ttagaataaa actgataaat aatgattttt
    26281 tgttggcatt atgcgcatga ttatgattgt gtccatgagc atgatcgtgg ttatgtgcca
    26341 tatgattact tcccctctgt aagtagctaa tttccttata tgcatatgtt a
//
LOCUS       DASDYK010000028        25846 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.028, whole genome shotgun sequence.
ACCESSION   DASDYK010000028 DASDYK010000000
VERSION     DASDYK010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 25846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25846
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.028"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..270)
                     /locus_tag="U0308_001192"
     CDS             complement(<1..270)
                     /locus_tag="U0308_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEM2316161.1"
                     /translation="MKIWNSIVGKIWSTIILLLIGILVISGFLVAMIYEKNNITQITN
                     ELEDKTASIITVMQENNEVISAENNNDSALILLDDTMGVIIEQNGK"
     gene            complement(371..1087)
                     /locus_tag="U0308_001193"
     CDS             complement(371..1087)
                     /locus_tag="U0308_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2316162.1"
                     /translation="MSEQVRVLVVDDEDRIRRLLKMYLERENYRIEEASDGDQALSMA
                     LNNNYEVILLDLMMPGKDGIEVCRELREFKSTPVVMLTAKGEEANRVQGFEVGADDYI
                     VKPFSPREVVLRVKAVLRRAKQSSEESAGGTPGDIITFPHLKIDNEAHRVIVDGKEIG
                     LTPKEYDLLYYLARSPDKVFDRESLLKEVWRYEFFGDLRTIDTHVKRLREKLHDVSED
                     AARMIVTVWGLGYKFEVPED"
     gene            complement(1270..2004)
                     /locus_tag="U0308_001194"
     CDS             complement(1270..2004)
                     /locus_tag="U0308_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEM2316163.1"
                     /translation="MERLQKVIANAGITSRRKAEKLIQEGKVTVNGKVVTELGVKVSG
                     TERIEVEGIQLTKEEHRYFLFYKPRGTVSAVTDDKGRTTVADYFADIPERLYPVGRLD
                     YDTSGLLLMTNDGDFANLLMHPKNEVSKTYIARIKGIPEREVIRQLERGVVIDGRKTA
                     PAKVKVRSSDKTKDKAIVEITIHEGRNRQVRKMFEAVGFEVQKLSREEYSFLNLRGLN
                     AGERRELSHHEVKQLKTEARFGKNKK"
     gene            complement(2007..2603)
                     /gene="scpB"
                     /locus_tag="U0308_001195"
     CDS             complement(2007..2603)
                     /gene="scpB"
                     /locus_tag="U0308_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEM2316164.1"
                     /translation="MNREEQLGVLESLLFAAGDAGLSTEQLTEVMEITHIEALNLLEL
                     LSDRYNGSADRGLILLELAGTFQLATKKAHAEFLRKLVEVPSNTVLSQASLETLAIIA
                     YRQPVTRMEVDEVRGVQTDGPIRTLVAKGLVTDKGRVDGAGRAKLYVTTSEFLDAFGL
                     NSLEDLPKLADPATDEPDQNEMDLFFDRFNQSKEQEEE"
     gene            complement(2600..3349)
                     /locus_tag="U0308_001196"
     CDS             complement(2600..3349)
                     /locus_tag="U0308_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEM2316165.1"
                     /translation="MVEMNFKVDAFEGPLDLLLHLIGQLEVDIYDIPMAEITDQYMEF
                     VHTMQEMELDVASEYLVMAATLLAIKSKMLLPKQELEIDYDTLEEEEDPRDALVEKLM
                     EYKRFKEAAKELKEKEAERSFYFSKPPMDLAEYDDGTKVAELDVSLNDMLSAFNKMLR
                     RKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELFEEQTKEQLVVTFLA
                     LLELMKRKLVEVEQAESFADLYVQGKGEEIS"
     gene            complement(3365..4675)
                     /gene="lysA"
                     /locus_tag="U0308_001197"
     CDS             complement(3365..4675)
                     /gene="lysA"
                     /locus_tag="U0308_001197"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEM2316166.1"
                     /translation="MTFERLGTMNVNAEGHLEIGGVDTLKLTEKYGTPLYVYDVALIR
                     DRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSGGELYTAIKANF
                     PPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEKASVLIRVTP
                     GIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIFET
                     TGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEV
                     RDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRP
                     ALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGA
                     YGYAMASNYNRIPRPSVVFVENGVDKLIVARETYENLVQNDLSL"
     gene            complement(4856..5674)
                     /locus_tag="U0308_001198"
     CDS             complement(4856..5674)
                     /locus_tag="U0308_001198"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEM2316167.1"
                     /translation="MSLEKVNEAVAKIRESYNGTPKIGLILGSGLGVLADEVNNPTKL
                     SYSEIPHFPVSTVEGHAGQFVFGELENKEVVAMQGRFHFYEGYSMQDVTFPVRVMKEL
                     GVEVLVVTNAAGGVNELYSAGDLMLISDHINFTGTNPLIGPNDEHFGPRFPDMSEAYN
                     LALRVDARLIAQELNLTIREGVYAGFSGPTYETPAEIQMMRTLGADAVGMSTVPEVII
                     ANHAGLRVLGISCITNMAAGILDQPLSHTEVIETTDQVRSTFLQYVKAIVAKIS"
     gene            complement(5693..6877)
                     /gene="deoB"
                     /locus_tag="U0308_001199"
     CDS             complement(5693..6877)
                     /gene="deoB"
                     /locus_tag="U0308_001199"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HEM2316168.1"
                     /translation="MPDKFKRVHVVVMDSVGIGEAPDAAKFGDFDVDTFGHIAKHVGG
                     LKMPEMGKLGLSNIREIDGIKKAEKPLAYYTKMQEASNGKDTMTGHWEIMGLYIDTPF
                     RVFPDGFPDDLINQIEEKTGRKVIGNKPASGTEIMAELGEEHVKTGALIVYTSADSVL
                     QIAAHEDVVPLEELYEICEFCRKITLDDPYMLGRIIARPFVGEPGAFVRTPNRHDYAL
                     KPFKPTVMDALKDGGKDVIAIGKISDIFDGEGVTESIRTKSNMDGMDQFIAVLDKDFN
                     GMSFLNLVDFDALFGHRRDPQGYADALVDFDGRLVEVMEKLTDDDLLIITADHGNDPT
                     YSGTDHTREFVPLLVYSPRFKNGGSELELRKTFADLGATVADNFEVKMPEYGTSFLKD
                     LK"
     gene            complement(6906..7799)
                     /gene="xerD"
                     /locus_tag="U0308_001200"
     CDS             complement(6906..7799)
                     /gene="xerD"
                     /locus_tag="U0308_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEM2316169.1"
                     /translation="MNDLIEDFLHFLIVERGLSANTIKAYERDLRYFVSYMDVAKGLT
                     DPNTLERSDIVGFMAFARQEGKSARSVARYIASLRSFFHYLMHDGKMSHDPMIQIETP
                     KQAQGLPKVLNLDDVEKLLSSSDTSTPLGLRDQAMMEILYATGLRVTELVSLKMDDLH
                     LHMGFIQTIGKGDKERIIPLGKTATTVLEKYLEEARPKLRRPKYRNDFVFLNHHGQGL
                     TRQGFWKILKGIAKESGIEKPITPHTLRHSFATHLLENGADLRSVQELLGHADISTTQ
                     IYTHVTKLRLKDVYKQFHPRA"
     gene            complement(7954..8406)
                     /gene="fur"
                     /locus_tag="U0308_001201"
     CDS             complement(7954..8406)
                     /gene="fur"
                     /locus_tag="U0308_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HEM2316170.1"
                     /translation="MEGRIGRIKAQLHDASYKLTPQREATVRVLLENEKDHLSAEEVF
                     LRVKDIAPDTGLATVYRTLELLTELRVVDKINFGDGVSRYDLRQEGAKHFHHHLVCLE
                     CGSVEEIQEDLLEDVEKIVESKWNFLVKDHRLTFQGICTDCRQKSKKE"
     gene            complement(8648..9670)
                     /locus_tag="U0308_001202"
     CDS             complement(8648..9670)
                     /locus_tag="U0308_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEM2316171.1"
                     /translation="MYMTTAEKRKKSRRVWTLIILSVLIFCTFTYSVNAGYSKLPFLE
                     VIKSFFGMADAGTQLIVTEFRLPRIVIALLVGAGLAVSGTILQGISGNGLADPGILGI
                     NNGAGLAVMLYISFFPSTMDVPVLFMPFIGFVGAILTAFVVYGLSYSRSEGLLPNRLL
                     LTGIAVAAAIAALITLLTVRLDPQNYQRYAEWMAGNIWASSWQYVYALLPWLIVLGAI
                     AFMKVKTLDVLSFGDQVATGLGVRVEREKFVLLIVAVGLAAACVSVSGGIAFIGLIGP
                     HIARKLVGSAHRWVMVTAALSGGLLLLLADTIGRLIIQPSEIFAGIVVAIIGAPYFLF
                     LLAKAK"
     gene            complement(9670..10695)
                     /locus_tag="U0308_001203"
     CDS             complement(9670..10695)
                     /locus_tag="U0308_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEM2316172.1"
                     /translation="MDKSKQIKMNTRPTVAKFILSGGILLLLILALFGIAVGAADINL
                     STVWDALFHYNSSDTQHQIIRSLRVPRVVADMAIGAAFAVAGAIMQGITRNPLADSGL
                     LGLNAGSTFMVAVCFAFMPWLSYNSLILFSFVGAAIGAFLVFGVSSLAGSAMSPTRLV
                     LAGAAVSSLLTALSEGLAIYFQLSQDLAFWYAGGVAGVKWSQLAAIWPWLLGALIAAI
                     LLSRSITILSLGDDIAVGLGEKTTFVKIASMVVVLILAGLAVSVVGPVGFIGLIVPHL
                     VRFLVGVDYRWIIPCSAVVGAFLTLAADIVARTINPPYETPISVIFALIGVPFFLYVA
                     RKERRNL"
     gene            complement(10797..11738)
                     /locus_tag="U0308_001204"
     CDS             complement(10797..11738)
                     /locus_tag="U0308_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-hydroxamate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEM2316173.1"
                     /translation="MKKGIILLVSMLLIAVVLTACGDNKSAGKEKVEMRTYTMANGKK
                     VEIPAHPKRIVASEYLGNIVLLGMKPVGARAKQMENPFLKGRVDGIADIGDPVSAEKV
                     AELKPDLIIVSNDDEFEAMSKIAPTVLIPYATSKNVEEDVRQIADLVGEKKAGEAWLD
                     KFHQKAKESRAKLAGKLDPNETVGIYEVQDKDFYVMGQNMGRGGQAIYNALQLKAPAK
                     IQKDVLDGQDWQKISLEVLPEFAADRMFVTSTSSGSAKDGEKTLKDLTNSPIWKNLPT
                     FKAGNVYQMDFDTMFYYDPLAVEGQLDIIVEKLLASN"
     gene            11903..12727
                     /locus_tag="U0308_001205"
     CDS             11903..12727
                     /locus_tag="U0308_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316174.1"
                     /translation="MKDLHTDNLQISYDKRIIVDGLDIAIPANKITALVGANGSGKST
                     ILKTMSRLMKPSKGAVYLDGKTIHSQPTRDVAKQLAILPQNPSAPDGLTVFELISYGR
                     SPHQSSFKSITAKDREIIFWSLRVTNLMELADRPIDSLSGGQRQRAWIAMALAQETDV
                     LFLDEPTTFLDMTHQLDVLNLLKQLNQSENRTIVMVVHDLNHASRYAHHMIAIKEGKV
                     IAEGTPTNVMTEQTLEDVFNIKADILIDPRSGVPLCLPYETCNGCEIVKELDSSAK"
     gene            12717..13715
                     /locus_tag="U0308_001206"
     CDS             12717..13715
                     /locus_tag="U0308_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM2316175.1"
                     /translation="MPNEVYDVTIIGGGPIGLFSAFYSGLRSMKTKIIDAEPAVGGKV
                     RYFFPEKIIRDIGGIPAITGENLVANLKQQAETFHPTIVCSERVVDVTKLSDGTFQLT
                     SHNGSIHFSKTIVIATGSGTFEVNKLEALHAEDFPFAIHYDVKNIEQFRDKVVVVSGG
                     GNSAIDWAQTLEPIAKQVHLIYRGEDFKAHEESVRELQNSRVEIHIHHEINELIGTNN
                     QLTKINVCCNKTQATKTIQTDALFINHGVKVDLGTMAEWGFEQADFGIVVDDEMKTTV
                     PGIFACGDSATYPRKIRIIAAGLHEGPIAINSAKKYLEPTAADEAMISTHHESFIG"
     gene            complement(13731..14351)
                     /locus_tag="U0308_001207"
     CDS             complement(13731..14351)
                     /locus_tag="U0308_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2316176.1"
                     /translation="MDEKRLKILEVAMGEFTEKGYQAASTNKICAKAGVSKGLIFHYF
                     GSKEKLYIAAVSYAVDFATKEVRLEGEHWGDFVEMAIWSTKMKLDFNRKYPAVFGLIM
                     QAYGNPPVALKDKLEGFFDKAIERSEAQMNQVLSEMKLKKDVNMDAARKVMAALFKHI
                     TEISTVYLQSHPNATMEDFVPLAKDFTEMMRIVEFGICEEKKDLGE"
     gene            complement(14351..15166)
                     /locus_tag="U0308_001208"
     CDS             complement(14351..15166)
                     /locus_tag="U0308_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2316177.1"
                     /translation="MNILHIEWKTRIKSLVVWAVVVIVILGVFMAFFPSMQSSGMQDL
                     VNTKMNALPQDMMKILHMDSMADLTNIDAYFAYVFQYIFIAACVYAALIGAQALIKEE
                     TDGTIEFLYAQPITRSSLVFWKMIGNLLSFVAFWVITFVASVALVLFLKPSGVDGGNL
                     VMELVRVFSSELLVAAVFMSAGFMVSSVLRSAKQASPVALALVFLTYILGIMAGLNDK
                     VDFFQYFSPINYAIPSEIMDKGITGTNALISCGVIVVMVAMTFVLYKKKDLKV"
     gene            complement(15163..16050)
                     /locus_tag="U0308_001209"
     CDS             complement(15163..16050)
                     /locus_tag="U0308_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316178.1"
                     /translation="MEAIKVESLTKNYHKKRAIENVNLSVNEGELYGFIGPNGAGKST
                     TIKVLLNFIYATSGSATVLGKDVVKDSAEIKKMVGYVPSEVRYYPQMTANDIIHYAAK
                     FHHIENATQKMNKYYEMFSIDPKKRFGEMSLGNKKKVAIVAGLITEPELFILDEPTNG
                     LDPLMQHYLFKEMTERNKEGMTIFLSSHNLREVQEYCTRAAFIRNGNIIAVEDIANQQ
                     MTGKVIALKGTNLPLEKLTNAGARIIEKEAGKARLIFDDDIKTILPLLQEKEITDLTI
                     TNQELEDKFMTLYEGGEIK"
     gene            complement(16524..17081)
                     /locus_tag="U0308_001210"
     CDS             complement(16524..17081)
                     /locus_tag="U0308_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM2316179.1"
                     /translation="MDSLEEKTLHTEKIFSGNIIELQVDDVELPNGEKGKREIVKHPG
                     GVAIIPFSADGRMYLVEQFRKPLEKNIIEIPAGKMEPGEDPLVTAKRELEEETGFQSD
                     DLTYLTSFYTSPGFASELLYIYVARDLRKMEHPLAQDADEFINLVKVTLEEAEQLIAQ
                     QCIHDAKTMYAIQYWKMQLLIEENE"
     gene            17355..18014
                     /locus_tag="U0308_001211"
     CDS             17355..18014
                     /locus_tag="U0308_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-bromo-4-chloroindolyl phosphate hydrolysis
                     family protein"
                     /protein_id="HEM2316180.1"
                     /translation="MTVFKKILAFTGSIFLVMLLAGILTSLIHSGLVIAAIVIAVAAI
                     LFFFSSKAGDRAQMIATGLTKKEYKYIRTNLEEARVKIIRLQKIMTQNKALYSFQERN
                     KTLLLTKRIYGIVKDEPKRFYEAEDFFFSHLDSLVELTEKYAFLEKQPVKDKKIYQTL
                     SDTRTLLNDLSRVIEKDLFTLLNQDVNNLDFELEVAKNSISKQKKKFERGTKDDREQA
                     K"
     gene            17992..19191
                     /locus_tag="U0308_001212"
     CDS             17992..19191
                     /locus_tag="U0308_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HEM2316181.1"
                     /translation="MTENKPSEETNELKDLVVEKEFNQTLDDLLANPFGSDGESAASI
                     VNNETDAAPRLVDMLTETNKKQALELSKQIEPGNQAAILGYGAPAQAKLHDFSHSMLA
                     HVQKQDVGPIGDIISDLMYRLQEADPDELAARNKNVFTKMFHRVKQSINEITSKYQKI
                     GTQIDRIALKLEHSKKRLMEDNSFLEQLYDKNKDYFQALNIYIAAGELKLEEINTKML
                     PELRKKAEQTGDQMDYQEVNDLTQFADRLDKRVYDLRLSRQITIQQAPQIRLIQNTNQ
                     ALAEKIQSSIMTAIPLWKNQVAIALTLLRQQQAVAAQRQVSETTNELLKRNADMLKTN
                     AIETARENERGIVDIETLKETQSSLIETLQETLKIQQEGRAKRAVAEKELVTMEQELK
                     ERLLEMK"
     gene            complement(19228..20298)
                     /gene="dinB"
                     /locus_tag="U0308_001213"
     CDS             complement(19228..20298)
                     /gene="dinB"
                     /locus_tag="U0308_001213"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEM2316182.1"
                     /translation="MDTSRKIIHIDMDAFYASVEQRDHPEFRGKPLIIGGDPNKRGVV
                     ATCSYEARKFGVHSAMPTRQAAKLCPNGIFIHGNMAHYVEVSNQIREIFSRYTDIIEP
                     LSLDEAYLDVTENKKGMKSATMVAREIQQTIYQELGLTASAGVSFNKFIAKIASDFKK
                     PAGITVVTPEEAEAFLEQIPVTKFYGVGKVTAEKLHRLGIETGADLKKWSEWDLIREL
                     HKHGYHLYRHVRGRSNNIVNPHRDRKSVGKETTFEFNVLDSRVLEQSLMQFAKKVEER
                     LIKLQKHGKTVVLKLRYSDFTTITKRLTLNEYTNDASQIYQAAALLLRESYTGQDSIR
                     LIGLTVTNLKPVYFENLRLEGL"
     gene            complement(20407..21198)
                     /locus_tag="U0308_001214"
     CDS             complement(20407..21198)
                     /locus_tag="U0308_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2316183.1"
                     /translation="MNPFLKNKTVLITGASNGLGAEIARQVAMSGGNVIITARSTKKL
                     IELQKDIHDNFSVEATYFTLDMTDFEQVKQVSAEINASYQIDVLVNCAGFGLFENAVD
                     IPFETIEKMFDTNVLGLIQLTQLILPQMQARKAGHIINIASQAAKIATPKSTVYSATK
                     YAVLGFSNALRLELMPDKIHVTTINPGPIATNFFDVADKSGNYLETVGKLVLKPEKVA
                     RKTVQIMGTKRREINLPFVMNIATRLYQVMPQVIEFFGKGAFLKK"
     gene            complement(21203..22123)
                     /gene="rnz"
                     /locus_tag="U0308_001215"
     CDS             complement(21203..22123)
                     /gene="rnz"
                     /locus_tag="U0308_001215"
                     /EC_number="3.1.26.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HEM2316184.1"
                     /translation="MELVFLGTGAGVPSRGRNVTSIALSMLNERNTIWLFDCGEATQH
                     QIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYVET
                     SLRLSGTRLTYKINFEEIEPGLIFEDEMFLVTADDLDHGVRSFGYRIVEKDKQGALNA
                     EKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKIISIFGDTKETANE
                     LELALNADILVHEATFEGDKAKMAGEYMHSTTLQAANLAKTANVKKLILTHISSRYDR
                     DASKELLIEAKTIFENTEIAYDLAVFPIGE"
     gene            22424..23899
                     /locus_tag="U0308_001216"
     CDS             22424..23899
                     /locus_tag="U0308_001216"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEM2316185.1"
                     /translation="MTDELEQKALITIFGGTGDLANRKLYPSLYHLYSKGSLGDNFAV
                     IGTARREWSNDFFRDKVKESIKDIDGSEKDADAFASHFYYQSHDVTNKESYVTLKDLS
                     DELDAKYELGGNRLFYLAMAPNFFGTIASRIKSEGFVDTDGFHRLIIEKPFGHDLASA
                     EELNNSLRQAFKEDEIYRIDHYLGKEMIQNISVIRFANSIIESLWNNRYIDNIQVTLT
                     EVLGVEDRGRYYDESGALRDMVQNHILQIVSLLAMEPPINLTTREIRHEKVRALRSLR
                     VFEGKEVHQNFIRGQYGPGEVGGKELKGYRQEDNVDPHSNTETFVAAKLEIDNFRWAG
                     VPFYIRTGKRLAKKTTQIAIQFKDVPLNLFGQQQSLGGNVLVIHIQPDEGITLHLNVK
                     EPGQGMVTMPVNLNYIHSSPDGMNTPEAYEKLILDCLRGDATYFSHWDEVSLSWNFID
                     HIADVWTNTKDHFPNYKSGSMGPKEADDLIQRDGFQWFPID"
     gene            24018..24449
                     /locus_tag="U0308_001217"
     CDS             24018..24449
                     /locus_tag="U0308_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1694 domain-containing protein"
                     /protein_id="HEM2316186.1"
                     /translation="MAENIDDYLEKGMYGAKEINPAEKKKYLGTYRERVLVALTKEEV
                     LTQEYLPELEKAILENSDSKLLLNGLLHYNSLRPYIKLAEKCKHEFSIVTRLEGETDI
                     YLVLACQKAVNKEDIHLYKEAEVEQEEEPVSLLEKVRKLFN"
     gene            24481..24618
                     /locus_tag="U0308_001218"
     CDS             24481..24618
                     /locus_tag="U0308_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316187.1"
                     /translation="MLHIITLSLAILMALQTIYFFIRKNVNMGVMFLLITAALLLLST
                     I"
     gene            complement(24601..25086)
                     /locus_tag="U0308_001219"
     CDS             complement(24601..25086)
                     /locus_tag="U0308_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316188.1"
                     /translation="MGISNKTNLIIIASGKPKIWDKSPDIGPVKASEVYTGTFHRLSR
                     AYAEQFANEYLILSPKYGFLRPDDIISKTYDVRFTMKGTSADTIQLEELKEQWQKLQI
                     NPTEPIPMLGGKKFRGLLTSITDGKQVFNFPLDGASGIGVMQRNLKQAIETGIPLNRT
                     E"
     gene            complement(25059..25586)
                     /locus_tag="U0308_001220"
     CDS             complement(25059..25586)
                     /locus_tag="U0308_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2316189.1"
                     /translation="MDNLETDRLILINYTLEMIQATINGTEALEKASGYHVSPDWPGI
                     DFFFYLPYVLENVKKDDRMIKWTRLVVLKEENKIIGEIGGQGNPDETGEIEIGYSIVP
                     DYQNKGYMSEALIGMIAWLEEQPAIHRIFARSYEQNMASIQVLKHNHFVHIKEKDTEE
                     KQGRVMMWEYPIKRT"
BASE COUNT         7895 a         5655 c         4228 g         8068 t
ORIGIN      
        1 ttttccattt tgttcgataa tgacgcccat cgtatcatca agtagtatca gtgcagaatc
       61 attattattt tcagcagaga ttacttcatt attttcttgc attacagtga tgatactagc
      121 tgttttgtct tctaattcat ttgttatttg agtaatgtta tttttttcat aaatcattgc
      181 aactaaaaat ccagaaataa ctaaaatccc tatcagtaag agaataatgg tactccaaat
      241 tttcccaaca atactattcc aaatcttcat ctattctcac ctcggtcctc gcaaaaaaat
      301 aacgaacaaa gcacgtgcgg cataacactt gccgattaaa cgtctttgcc cgttatctta
      361 gtctggttta ttaatcttct ggaacttcaa atttatatcc aagaccccaa actgttacaa
      421 tcattctagc agcgtcttct gatacatcat gcaatttttc gcgaagtctt ttaacgtgtg
      481 tatcaattgt tcgcaaatcg ccaaagaatt cataacgcca tacttctttt aaaagagact
      541 cgcggtcgaa tactttatcc ggagatctcg ctaaataata aagcaagtca tattctttcg
      601 gtgtcaaacc gatttctttt ccgtcgacaa taacacggtg agcttcgtta tcaattttca
      661 aatgtgggaa ggtaataatg tctcccggtg ttcctcctgc tgattcttct gaggattgtt
      721 tggcgcgacg aagaacagct ttcacgcgaa gcacaacttc tcttgggcta aatggtttta
      781 cgatgtaatc atctgcacca acttcaaagc cttgtactcg gttagcttcc tctccttttg
      841 cagtcaacat gacaacaggt gtggatttaa actctctcag ttcacgacaa acttcgatgc
      901 catctttacc aggcatcatt aaatcaagta ggattacttc ataattattg ttcagcgcca
      961 tgcttaatgc ttgatcacca tcactagctt cttcaatacg atagttttct ctttcaagat
     1021 acatcttaag aaggcgtcgt atccggtcct catcatccac aacaagcact ctaacttgtt
     1081 cactcataag tactcatccc ctaactctca tttacataaa acgatcattt acattcaatc
     1141 agataaatgg aatcttccgt acccacatac gaaaaaacca tacaattgcc tataccaaat
     1201 ttcctacgat ttaaattata catgtttttc acaaaacacg ctattagaaa gtatattttg
     1261 tatgaaaagt tactttttat ttttaccaaa tcttgcttct gtttttaatt gttttacttc
     1321 atgatgtgat aattctctac gctcacctgc gtttaaaccg cgtaaattca agaacgagta
     1381 ttcttccctt gataattttt gcacttcaaa accaacagcc tcaaacattt tacggacttg
     1441 acgatttcta ccttcatgaa tcgtgatttc tacaatagct ttatctttcg ttttatcaga
     1501 agaacgtact tttacttttg ctggggctgt tttgcgacca tcaatcacca caccacgttc
     1561 taactgacga atcacttcac gttcaggaat acctttgatt cgtgcgatat atgttttgga
     1621 aacttcattt ttcggatgca ttagtaagtt agcgaaatcc ccatcattgg tcattaataa
     1681 taaaccagat gtatcataat caagtcgccc tactgggtat aatctttcag gaatatctgc
     1741 aaaataatcc gctacagttg tacgaccttt atcatctgtt acagccgaaa ccgttcctct
     1801 tggcttataa aaaaggaaat agcgatgttc ttcttttgtt agttgaattc cctcaacttc
     1861 aattcgctcc gtaccactaa ctttcacacc taattctgtg actactttcc cgttcactgt
     1921 tactttacct tcttgaataa gcttttctgc ttttcttctt gaagtaatac ctgcatttgc
     1981 aatcactttt tgtaaacgtt ccattcttat tcctcctcct gttctttact ttggttaaac
     2041 cggtcaaaaa acaggtccat ttcattctga tctggttcat ctgtcgctgg atcagcaagt
     2101 tttggtaaat cctctagaga attaagtcca aaagcatcta aaaactcact tgtagtaacg
     2161 taaagttttg ctcgtccagc tccgtcgaca cgacctttat ccgttacaag tcctttggct
     2221 actaaagttc gaatcggtcc atctgtttga acgccgcgaa cctcgtctac ttccattctt
     2281 gtaactggtt ggcggtaagc aataattgct aatgtctcta atgatgcttg cgataaaacg
     2341 gtgttgcttg gaacttcgac taatttacgt aaaaattctg catgcgcttt tttcgtagct
     2401 aattgaaatg ttccagcaag ctccaaaaga attaaacctc tgtcagcact tccgttgtat
     2461 cgatcactta aaagttctag taaattgagt gcttcaatgt gcgtaatttc catgacttca
     2521 gttaattgtt ccgttgaaag ccccgcatct cccgccgcaa aaagcaaact ctctaatacg
     2581 cctaattgtt cttctctgtt cacgatattt cttccccttt accttgcaca tataaatccg
     2641 caaaactttc cgcttgttct acttcgacca attttcgctt cattaattct aacaaagcca
     2701 aaaacgtaac gacaagttgc tctttcgttt gttcttcaaa taactcgtca aatcgcaagc
     2761 gatgattgac ttgtaaattt aatttttcta aaacagaatc cattctttga tcaatggaga
     2821 tttcttgtgt tgtaattctt gtatggagag gtttatttaa ctttttccga cgtagcattt
     2881 tgttaaaagc acttagcata tcgtttaatg atacgtccag ttctgccacc ttagtaccat
     2941 catcatattc tgctaaatcc attggaggtt tactgaaata aaagctccgt tccgcctctt
     3001 tttcttttaa ttcttttgcg gcttctttga atcgtttgta ttccattagt ttttcgacta
     3061 aagcatcacg aggatcctct tcctcttcta gtgtatcata atcgatttcc agttcttgct
     3121 ttggaagtag catcttactt ttaattgcta gtaaagttgc tgccatcact aaatattcac
     3181 tcgcgacatc taattccatt tcttgcattg tatgaacaaa ttccatgtat tggtccgtaa
     3241 tttcagccat agggatgtca taaatatcga cttctagttg tccaattaaa tgaagaagta
     3301 agtcaagcgg tccttcaaac gcgtccactt taaaattcat ttctaccata tctgtcccgc
     3361 cctactataa tgaaagatca ttttgcacta aattttcata tgtttcgcgg gcaacgatta
     3421 atttatcgac tccgttttcc acaaaaacaa ctgatggtct tgggatacgg ttataattac
     3481 ttgccatcgc ataaccatag gctccagtac aaaataccgc caaaacttca ccggcgtttg
     3541 atttcggtag tggtaagtcc catattaaca tatcaccaga ctcacagcat tttcctgcga
     3601 tagccactgt ttcttctgcg actttctctg ggtttgccgc aagaacagca tcgtaatgcg
     3661 catcatataa cgctggacgg atattatcag acatgccgcc gtcaactgcg atataattcc
     3721 gaattcccgg aacttcttta cgcgatccaa ctttataaag tgttgtacct gcttcaccaa
     3781 caagggaacg acctggctca atccaaattt ctggaatatc aatatcgtta ttattagcca
     3841 catcccgcac ttcatccata atttggcgca catattcgct aggttcaaga ggttcatctt
     3901 ctgccgtata acggacaccg aaaccgccac caagattaag tactttggaa tcaaatccca
     3961 gagtttggtg ccattcaact aatttatcca taatacgacg agccgctaat ttaaaacccg
     4021 ttgtttcaaa aatttgcgac ccaatatgac agtgtaggcc aattaaatca aaggacgcac
     4081 ttgcatgaag cacttgttta atcgcttttt cagcttgtcc atttgtaagt ccaaatccaa
     4141 atttcgaatc atcttggcct gttaaaatat agtcatgtgt atgagcttct atccccggtg
     4201 tcacgcgaat taaaaccgat gccttttcat ttcgttctat taatatatct tctaataaac
     4261 taatttcata ataattatcg ataacaaaac aaccgatgcc atagtcaagc gccatatgta
     4321 tttcttctgc acttttatta tttccgtgaa aatgaattct ctcaggagga aaatttgctt
     4381 taattgctgt ataaagttct ccgcctgaaa caacatctag tgataaacct tcttcggcca
     4441 tcagctgata aatcgctact gcagaaaatg ctttgctcgc ataagccact tgtgctttta
     4501 cgcctagctc ttcgaatgtt ttcttaaatc ctcttgctcg gtcacggatt agcgctacat
     4561 cataaacgta cagtggcgta ccatattttt cagtaagctt taaagtgtcc acccctccaa
     4621 tttcgagatg tccttctgca tttacattca ttgttccaag ccgttcaaac gtcacgccaa
     4681 tcccaccttt acattataga tttttaaaag ttcttttata tagtagcaca ctaagaagcc
     4741 gagcgacaat aactatctga aaatattatc aaatacgtaa aaaactcagc ccaaatctat
     4801 tatctccttg cttcagaaaa taacaaattt ggactgagat tagctaccaa ttattttaag
     4861 aaattttagc aacaatggct tttacatatt gtaaaaacgt gctgcgaact tgatctgttg
     4921 tttcaataac ttccgtatga gaaagtggtt gatccagaat tccggctgcc atattggtaa
     4981 tacaagaaat acctagcact cgtaatccag cgtggttcgc aatgattact tccggtacag
     5041 tggacatccc aactgcatct gcaccaagtg tgcgcatcat ttgaatttca gcaggtgttt
     5101 cataagttgg accgctaaat ccagcataaa caccttcacg gatagtcaaa ttaagttctt
     5161 gagcaataag tctagcatcc acacgtagag ctaaattata cgcctcggac atatctggga
     5221 aacgcggtcc aaaatgctca tcatttggtc caataagcgg gttcgttcca gtaaagttaa
     5281 tgtgatcaga aatcaacatt aagtctccag cagaatataa ttcatttacg ccacctgccg
     5341 cattcgtcac aacaagcact tctacaccaa gctctttcat cacacgaact gggaaagtaa
     5401 catcttgcat tgaatagcct tcataaaagt ggaaacgtcc ttgcattgca acaacttctt
     5461 tattttccaa ctcaccaaaa acaaattggc cagcatgtcc ttctactgtc gaaacaggaa
     5521 aatgtgggat ttcgctataa gaaagttttg tcggattgtt tacttcatcc gcaagcacac
     5581 ctaaacctga accaagaatc aaaccaattt ttggtgtacc attgtaactt tctctaattt
     5641 tcgcaactgc ttcatttact ttttctaaac tcatttttgt tcctcccttt tcctatttca
     5701 agtcttttaa gaaacttgtt ccatattcag gcattttcac ttcaaaatta tccgcaactg
     5761 ttgcgccgag atcggcaaat gttttgcgta attctaattc tgaaccacca tttttgaagc
     5821 gtggtgagta tacaagtaat ggtacaaact cacgtgtgtg gtctgtgcca gagtatgttg
     5881 ggtcatttcc gtgatcagct gtaataatta atagatcatc atctgttaat ttttccatta
     5941 cttctactaa acgaccgtca aaatcaacga gcgcatctgc ataaccttgt ggatcacgac
     6001 gatgtccgaa aagtgcatca aagtctacta aattcaagaa actcataccg ttaaaatctt
     6061 tatctaacac agcgataaat tgatccattc cgtccatatt tgatttcgta cggatagatt
     6121 ccgtaacacc ttcaccatca aaaatatcag aaattttacc aatggcaatc acgtctttac
     6181 cgccatcttt taaagcatcc attacagttg gtttaaatgg ttttagcgca tagtcatggc
     6241 gatttggcgt tctaacaaac gcacctggtt cgccgacaaa tggacgagcg ataatacgac
     6301 caagcatgta cgggtcatct agtgtaattt tacggcagaa ttcacagatt tcatataatt
     6361 cttccaaagg tacgacatct tcatgtgctg caatttgtaa aactgagtca gctgatgtgt
     6421 aaacaataag cgcacctgtt ttcacatgct cttctccaag ttcagccata atttctgttc
     6481 cgctcgctgg tttatttcca attactttac gtcctgtttt ttcttcaatt tggttgatta
     6541 aatcatccgg aaatccatct gggaatacgc ggaaaggcgt gtcaatgtat aggcccatga
     6601 tttcccagtg acccgtcatt gtatctttac cgttcgaagc ttcttgcatt tttgtatagt
     6661 aagcaagtgg tttttctgct tttttaattc cgtctatttc tcgaatattc gatagaccta
     6721 atttgcccat ttcaggcatt tttagtccgc cgacgtgttt ggcaatatgt ccaaatgtat
     6781 ctacatcaaa atcaccaaat ttagcagcat ctggtgcttc tccaatacca actgaatcca
     6841 ttacaactac atgtactcgt ttaaatttat ctggcatatt tactcatcct tttcaactat
     6901 attttttaag cgcgcgggtg gaattgtttg tagacatctt tcaaccgcag ctttgttacg
     6961 tgtgtataaa tttgtgtagt ggagatatcg gcgtgaccaa ggagttcttg aaccgacctt
     7021 aaatcagccc cattttcaag taaatgagtg gcaaatgaat gacgcaaggt gtgcggtgta
     7081 atcggctttt caatgcctga ttctttcgca atacctttta aaattttcca gaaaccttgt
     7141 cttgtgagtc cttggccgtg atgatttaaa aacacaaaat catttcggta tttcggtcta
     7201 cgaagttttg gtctcgcttc ctctaaatac ttctctaaca cagttgttgc cgtttttcca
     7261 agcgggataa ttctttcttt atctccttta ccaatcgttt gaataaaacc catatgaaga
     7321 tgtaaatcgt ccattttcag gctgacaagt tccgttacac gaagccctgt cgcatataaa
     7381 atttccatca ttgcttggtc ccttaatcca agtggtgtac tcgtatcaga ggaactaagt
     7441 aacttctcga catcatcaag gttcaaaact tttggtaatc cctgggcttg tttcggcgtt
     7501 tcaatttgaa tcattgggtc atgtgacatt ttcccatcgt gcattaaata atgaaagaaa
     7561 gatcgcagtg aagcaatata gcgcgccaca cttcttgctg atttcccttc ttgtcttgca
     7621 aatgccataa aaccaactat atcgcttcgt tcaagtgtat tcggatctgt taatcccttc
     7681 gctacatcca tataagaaac aaaatagcgt aaatctcgtt cataagcttt gattgtattc
     7741 gcggataaac ctctctctac aattaaaaaa tgtaaaaaat cttctattaa atcattcata
     7801 agcgtttcct ccacaaatcc tattctacca tgttacactc ccactgaaaa cgtttaatta
     7861 atagaaaaag acttataata cttttcgcgc aattcagtcc atctttttta atcataaaaa
     7921 aaagtttgag ataaattatc ccaaactctt gtattattct tttttagatt tttgtctgca
     7981 atctgtgcaa atcccttgga aagtcagacg atggtcttta acaagaaaat tccacttcga
     8041 ttcgacgatt ttctccacat cttctaataa atcttcttga atttcttcta cagaaccaca
     8101 ctctaaacat actaaatgat gatggaaatg tttggcgcct tcttgtctca agtcataccg
     8161 agaaacaccg tcaccaaaat taattttatc aaccacgcgt aattcggtta aaagttccaa
     8221 cgttctataa acggttgcaa ggccagtgtc aggtgcaata tctttcacac gcaagaaaac
     8281 ttcctcggca cttaaatgat ctttttcatt ttccagtaaa acgcgaacag tagcttctcg
     8341 ctgtggggtt aatttataac tagcatcatg aagttgtgct ttaatgcgtc caatacgacc
     8401 ttccattatg gttcctccct tggttgctac aacaagttgt ctttctaaat tatcatcatt
     8461 atcatttaac aataaataca gtttataata attataaata aaatgcaagt taggaattca
     8521 ctttttttag taaaaatggc acgtagtcaa ttcctattgc ttatgtttac taagatatca
     8581 taaaagcaat aggctgtcta caatgattat caattactaa ttaatttctc gttatcaata
     8641 ataattatta tttagctttt gcaagcaaga acaagaaata aggtgcaccg ataattgcca
     8701 caacgatacc agcaaatatt tcggatggtt gaataatcaa tcgtccaatc gtatccgcaa
     8761 gtaataatag tagccctcca gaaagtgccg ccgttaccat cacccagcga tgtgcggatc
     8821 caactaattt tctagcaata tgcggaccaa ttagaccaat aaatgcaata ccgccactaa
     8881 cggatacaca agcagctgcc aaaccaactg ctactattaa aagcacaaat ttttctcgct
     8941 caacccgaac gccgagtccg gttgccactt ggtctccaaa agagagcaca tccaacgtct
     9001 ttactttcat aaaagcaatt gcacctaaaa caataagcca tggcaaaaga gcataaacat
     9061 attgccagct tgaagcccaa atatttcctg ccatccattc agcatagcgt tgataatttt
     9121 gcggatcaag ccgaaccgta agcagtgtga taagtgccgc aatcgccgcc gcaacagcaa
     9181 tccccgtaag aagcaatcga ttaggcaaca atccttcgct tctactataa gaaagtccgt
     9241 aaacaacaaa cgcagttaaa attgccccga caaatccaat aaatggcata aataaaaccg
     9301 gaacgtccat cgtggaagga aaaaaggaaa tataaagcat aaccgcaagt cccgcgccat
     9361 tattaatccc aagaattccc ggatcagcta atccgtttcc agaaatccct tgtaggattg
     9421 ttcctgaaac cgcaagccct gcaccaacta atagcgcaat aactatccgt ggcaaacgaa
     9481 actccgtcac aataagttgt gttcccgcgt ccgccattcc aaaaaacgac ttaatcactt
     9541 ccaaaaatgg caatttcgaa taaccagcat tgacactata tgtaaatgta caaaaaatta
     9601 acacgcttaa aataattaac gtccaaactc gccgcgattt ttttcgtttt tctgccgttg
     9661 tcatatacat tataagttcc tcctttcttt acgtgctaca tataagaaga aaggaacccc
     9721 gattaatgca aaaataacac tgattggcgt ttcatatggc ggattgattg ttctcgccac
     9781 aatatccgcc gctaatgtca gaaaggctcc aacaaccgcc gagcaaggga taatccagcg
     9841 ataatctact ccaactaaaa atcgtaccaa atgcggtaca atcaagccga taaacccaac
     9901 cggaccaaca accgacacag caagccccgc caaaatcaac accacaacca tcgaagcaat
     9961 tttaacaaaa gtagtttttt cacctaaacc aacagcaata tcatcgccta agcttaaaat
    10021 ggtaatcgat ctacttagca aaatcgccgc aataagcgct ccaagtaacc aaggccaaat
    10081 cgccgcaagc tgactccatt tcacaccagc aaccccgccc gcgtaccaaa aggccaaatc
    10141 ctgacttaac tgaaaataaa tcgcgagtcc ttcactaagc gcagtaagca atgaactaac
    10201 cgccgctcca gcaagcacta gcctcgttgg cgacattgcg ctccctgcaa gagaactaac
    10261 gccaaatact aaaaatgccc caattgccgc cccaacaaaa gaaaataaaa tgagcgaatt
    10321 ataactaagc caaggcataa atgcaaaaca aactgctacc ataaacgtcg atccagcatt
    10381 caacccaagc aagcctgaat cagcaagtgg attccgagtg attccttgca taatcgctcc
    10441 agcaaccgca aaagcagccc ctatcgccat atccgcaacc acccgaggaa cacgtaaact
    10501 acgtataatc tggtgctgcg tatccgaact attataatga aaaagtgcat cccaaaccgt
    10561 acttaaatta atatcggctg caccaaccgc aatcccgaat aacgctaaaa tgagaagcaa
    10621 caaaatccca cccgaaagta tgaatttagc aacagtcggt cttgtattca tttttatctg
    10681 ttttgactta tccatctgca catgttcctt ccatctaaat tatccgctca ttttaagtga
    10741 taataattat caatcgcaaa gaaaattata tcaatatcat tcactaagcg caatcattag
    10801 ttggacgcaa gtaacttctc tacaataata tccaactgtc cttctaccgc taatggatca
    10861 taataaaaca tcgtgtcaaa gtccatttgg taaacattcc ctgctttaaa cgtcggcaga
    10921 tttttccaaa ttggcgagtt cgttaaatct tttaatgttt tctcgccgtc tttagcactc
    10981 ccagaagaag tgcttgtaac gaacattcta tcggccgcaa attcaggtaa aacttccagt
    11041 gaaatctttt gccaatcttg cccatctaaa acatctttct gtatttttgc tggtgctttt
    11101 agttgtaaag cattataaat cgcttgacca cctcgcccca tattttgtcc catcacataa
    11161 aaatctttat cttgtacttc ataaatccct actgtttcat tcggatctaa cttgccagcc
    11221 aacttcgctc tactttcttt ggctttttga tgaaacttat ctagccacgc ctctccagcc
    11281 tttttttctc caactaagtc cgcgatttgg cgaacgtctt cctccacatt ttttgaagtt
    11341 gcgtacggaa ttaacaccgt tggcgcaatt ttcgacattg cctcaaattc gtcatcgttt
    11401 gaaacaatga ttaaatcagg ttttaattcc gccacttttt ctgctgaaac tggatcacca
    11461 atatctgcaa tcccatccac acgccctttc aaaaacggat tttccatttg tttcgctcta
    11521 gcccccacag gcttcattcc aagcaaaaca atattcccta gatattccga agccacaata
    11581 cgtttcggat gtgctggtat ttctactttc tttccatttg ccattgtata tgtacgcatc
    11641 tcgaccttct cttttccagc cgatttgtta tctccacaag cagttaaaac cactgcaatt
    11701 aaaagcattg acacgagtaa aatgataccc tttttcaatt gaacccctcc agtaattgat
    11761 aataattctc aattagtata gcaactttat tcacaaagtg caaatcattt cggcaaagta
    11821 acgcttgcat cttcaccata aaaactctat acttaaccat tgagaatgat tatcacctta
    11881 cctttaaatt ggagcgatga aaatgaaaga ccttcatacc gataacttac aaatttcata
    11941 cgacaaacga atcattgttg atggtttaga tatagccatt ccagcgaata aaataaccgc
    12001 tttagtaggt gcaaatggct cagggaaatc gactatttta aaaacgatgt cccgcttaat
    12061 gaaacctagc aaaggcgctg tgtatttaga tggcaagacg attcatagtc agccaacgag
    12121 agacgttgcc aaacaactag ctattttgcc acaaaatcct tctgcacctg atggtttaac
    12181 ggtgtttgaa ttaatttctt atggacgttc cccacatcaa agtagcttta aatcgattac
    12241 cgcaaaagat cgcgaaatta ttttttggtc attgcgcgtg acgaatttaa tggagttagc
    12301 ggatcgacca attgatagtt tatcaggtgg acaacgacag cgtgcatgga ttgccatggc
    12361 gcttgcccaa gaaacagatg tactatttct tgatgaaccg acgacctttt tagatatgac
    12421 gcaccaacta gatgtactta atttattgaa acaattaaat caatcagaga accgcacaat
    12481 tgtgatggtt gttcatgatt taaatcacgc atctcgttac gctcaccata tgatcgctat
    12541 taaagaaggg aaagtcatcg cagaaggaac accaaccaat gtcatgactg aacaaacttt
    12601 agaggatgtt tttaatatca aagcagatat tttaattgat ccccgcagcg gtgtccctct
    12661 ttgcctcccc tacgaaactt gcaacggatg cgaaattgta aaggagcttg attccagtgc
    12721 caaatgaggt ttatgatgta accattatcg gcggcggtcc cattggccta ttctccgcat
    12781 tttatagtgg gcttcgttcc atgaaaacaa aaattatcga tgctgaacct gctgttggcg
    12841 ggaaagttcg ctactttttt ccagaaaaaa tcattcgcga tatcggtggt attcccgcca
    12901 ttaccggcga aaatcttgtc gcaaatttaa aacaacaagc agaaaccttt catccgacta
    12961 ttgtttgcag tgagcgagtt gtcgatgtga caaaactatc agatggcact tttcaattaa
    13021 cttcgcataa cggttcgatt catttttcaa aaacgattgt cattgctaca ggtagtggca
    13081 cgtttgaggt caataaactt gaagctctac atgctgaaga ttttccattt gcaatccatt
    13141 atgatgtcaa aaatatcgag caattccgcg ataaagtagt agtggtttct ggtggtggaa
    13201 attccgctat cgactgggct cagacactcg aacccattgc caaacaagta caccttattt
    13261 accgtggcga agattttaaa gcacacgagg aaagtgtccg agaacttcaa aattctcgcg
    13321 tcgaaatcca tatccaccat gaaatcaatg aactaatcgg aacaaacaat cagttaacca
    13381 aaatcaatgt ttgctgcaat aaaacccaag ccacgaaaac aattcaaaca gacgcacttt
    13441 tcattaatca cggggtaaaa gtagaccttg gaaccatggc ggaatggggc tttgaacaag
    13501 cagattttgg cattgtcgtg gatgacgaga tgaaaacgac ggttcctggt attttcgctt
    13561 gtggagatag tgcgacttac cctcgaaaaa tacgcattat cgcagcggga cttcatgaag
    13621 ggcccatcgc gattaatagt gcgaaaaaat atttagaacc aactgccgca gatgaagcga
    13681 tgattagcac gcatcacgaa agctttattg gttaaaaaaa ggatttgggc tcactcgccc
    13741 aaatcctttt tttcttcgca tatcccaaat tcgacaattc gcatcatttc cgtaaaatcc
    13801 ttcgcaagcg gaacaaaatc ttccatcgtc gcatttggat ggctctgcaa ataaactgta
    13861 ctaatctccg taatatgttt aaaaagagcc gccatcactt tacgcgctgc atccatattt
    13921 acatcttttt tcaacttcat ttcacttaaa acttgattca tttgcgcctc tgatcgctca
    13981 atcgccttat caaaaaagcc ctcaagttta tctttcaatg caactggcgg atttccataa
    14041 gcttgcataa ttaagccaaa cacagcagga tatttgcgat taaaatccag tttcatcttc
    14101 gttgaccaaa tcgccatttc gacaaagtct ccccaatgtt ccccttccaa acgaacctcc
    14161 ttggtcgcaa aatcaaccgc ataactaaca gccgcaatat aaagcttttc tttagaacca
    14221 aaatagtgaa aaatcagccc tttggaaaca ccagcttttg cgcaaatttt attcgtacta
    14281 gccgcctgat atcctttttc cgtaaattct cccattgcta cttctaaaat ttttaatcgt
    14341 ttttcatcca ttatactttc aaatcctttt tcttataaag aacaaatgtc atagcaacca
    14401 tcacaacaat taccccacaa gaaatcagtg cattggttcc tgtaatccct ttatccataa
    14461 tctcagacgg aattgcatag ttaattggtg aaaaatattg gaagaaatcg accttatcat
    14521 tcaacccagc cataattcct aaaatatacg ttaagaacac aagcgcaagt gcaaccggag
    14581 aagcttgctt agcggaacga agcaccgatg aaaccataaa accagcactc ataaatacag
    14641 cagccactag caactcacta gaaaacactc gtacaagctc cattactaag tttcctccgt
    14701 caaccccact cggcttcaag aaaagaacta gcgccactga agctacaaat gtaatcaccc
    14761 aaaaagccac aaatgacaat aaattcccaa tcattttcca aaaaacaaga ctagaccgcg
    14821 taattggttg cgcatataaa aattcaattg ttccatccgt ttcttctttt atcaaggcct
    14881 gcgcaccaat taatgctgca tacacacaag ctgcaataaa aatatactga aaaacatacg
    14941 caaaataggc atcaatattc gttaaatccg ccattgaatc catatgcaaa attttcatca
    15001 tatcttgcgg aagtgcattc atcttcgtat tcactaaatc ttgcattcca ctactttgca
    15061 tactagggaa gaaagccata aacaccccta aaatcacaat caccacaaca gcccaaacaa
    15121 ccagactctt tattcgcgtt ttccactcaa tgtgtaggat attcacttga tttctccccc
    15181 ttcgtatagc gtcataaatt tatcttccag ctcttgatta gtaatcgtta aatccgtaat
    15241 ttctttttct tgtaataatg gcaaaatcgt cttaatatca tcatcaaaaa taagccgcgc
    15301 ttttcccgct tccttttcga taattcttgc gcccgcattc gttaattttt ccagtggcaa
    15361 attcgttcct ttcagcgcga ttactttacc cgtcatttgt tgattagcga tatcttccac
    15421 cgcgataata ttcccatttc gaataaaagc agctcttgta caatattcct gaacctcacg
    15481 taaattatga ctagaaagaa aaatcgtcat tccttcttta tttcgctcag tcatttcttt
    15541 aaataaataa tgttgcatta acggatcaag gccattcgtc ggttcatcca gaataaataa
    15601 ttccggctca gtaataagtc cagcaacaat cgccactttt ttcttatttc caagcgacat
    15661 ttctccaaag cgttttttcg gatcaatcga aaacatttca taatatttat tcattttttg
    15721 cgttgcattt tcaatatgat ggaacttggc agcgtaatgg ataatatcat ttgctgtcat
    15781 ttggggataa tagcgaactt cacttggcac ataaccgacc attttcttaa tttcagcaga
    15841 gtctttcacc acatctttcc cgagaaccgt cgcactccca cttgttgcgt aaataaaatt
    15901 cagtaagact ttaattgtcg ttgatttccc cgcaccattc ggaccgataa aaccataaag
    15961 ttctccttca tttacagaca aattcacatt ttcaattgct cgctttttat ggtaattttt
    16021 tgtgagcgac tccactttaa ttgcttccat gttctctcct ccacactcaa attgaccact
    16081 tagtcaacta gagtataatc ccttttgacc aggtagtcaa ttaagaacca taacacaata
    16141 aaaatctgta agactgtatc cagtaaaagt attcaaatta ctgttttcat gttagctctt
    16201 tcaacatgaa agggggatgc ctatgacttt tttgttagga actcctggaa aggataaccc
    16261 atgaccgttt atgaagcact ctcttttgca gtcgctttta caactttaat gttgttacta
    16321 aacagtcaaa ataacacaaa aaaataacca ctcataaact ttggcgagtt tagtggttat
    16381 ttttatacca tattagacta gctgccacct taaatggggc ttacatttga gggtcatgtt
    16441 cttgcatgac tctcttttca tgtttatgat accacatttc cattctttat gccaagtatt
    16501 cccaaatgag tttttcatcc gatttattca ttttcttcta ttaatagttg cattttccag
    16561 tactgtatcg cgtacattgt ttttgcgtca tgaatgcatt gttgtgctat taattgttct
    16621 gcttcttcca gcgttacttt gactaaatta ataaattcat ctgcatcttg cgccaatgga
    16681 tgctccattt tccggaggtc acgcgctaca taaatatata aaagttcact agcaaaccca
    16741 ggtgatgtat aaaaagaagt gagatacgtt aaatcatcgg actgaaaacc agtttcttct
    16801 tctagttccc gttttgcggt cacgagcgga tcttcccctg gctccatttt gccagctgga
    16861 atttcgataa tgtttttttc gagtggcttt cggaattgct ctactaagta cattcttcca
    16921 tctgctgaaa aaggtataat tgccacacca ccgggatgct tgacgatttc gcgcttgccc
    16981 ttttccccgt ttggtaactc cacatcatct acttgcaatt caataatatt tccgctaaaa
    17041 atcttttctg tatgaagcgt tttttcctct agtgagtcca tttctgccac ctacctctca
    17101 tttttttcat tataacataa ctaagtccga gtttaattta catcgcacga ctgataacat
    17161 ctattttcta aatatggtat gataagaaca aataaaggac aatttctaaa atataaaaac
    17221 cattcagctt gcctagtttt cgcttacaaa atatacttaa atggtaggtt aatttccatc
    17281 aatctttatt ttagaaaaat ttactataag aaaagcggac cttttaaaca ggtacttaaa
    17341 ggagaagatg tataatgacc gtttttaaaa agatattagc attcacaggt tccattttcc
    17401 ttgtcatgct tttggctggt atcctcactt cactaatcca tagtggtttg gtaattgcag
    17461 caattgttat cgctgttgcg gctatcctat ttttcttttc atctaaagct ggggaccgtg
    17521 cgcaaatgat tgcaactgga ttaaccaaga aagaatataa atatattcgc actaacttag
    17581 aagaggcacg tgtgaaaatt atccgccttc aaaaaatcat gactcaaaac aaagcgttat
    17641 attctttcca agagcgtaac aaaacacttt tacttacaaa aagaatttat ggcattgtaa
    17701 aagatgagcc aaaacgtttt tatgaagcag aagatttctt tttctcccat cttgactctt
    17761 tagtggagct aacagaaaaa tatgctttct tagaaaaaca acccgtaaaa gacaaaaaaa
    17821 tctatcaaac actttctgat acgcgcacac ttttaaatga tttaagtcgt gttattgaaa
    17881 aggatttatt tacacttttg aatcaagatg tgaacaacct tgacttcgaa ctagaagtag
    17941 cgaaaaactc catttctaaa cagaaaaaga aatttgaaag gggtacaaaa gatgaccgag
    18001 aacaagccaa gtgaagaaac aaatgaatta aaagatttag tagttgagaa agaattcaac
    18061 caaacgttag atgatctcct tgctaacccg tttggatcag atggtgaatc agctgcaagt
    18121 atcgtaaata atgaaacaga tgcagctcct cgccttgtcg atatgcttac tgaaacaaat
    18181 aaaaaacaag cattagagtt atccaaacaa atcgaacctg gaaatcaagc agcgattctt
    18241 ggatacggag ctccagccca agccaaactc cacgattttt ctcattcaat gttagcacat
    18301 gtacaaaagc aagatgttgg accaattggc gatattatta gcgatttaat gtatcgttta
    18361 caagaagcgg atcccgatga acttgccgct cgtaataaaa atgttttcac taaaatgttc
    18421 caccgagtaa aacaatccat caacgaaatt acttctaaat atcaaaaaat tggtacccaa
    18481 attgaccgca tcgcgttgaa actggaacat tccaaaaagc gtttaatgga agataactct
    18541 ttcctagaac agctttatga taaaaataaa gattacttcc aagcacttaa catctacatt
    18601 gctgctggag aattaaaatt agaagaaatt aatacaaaaa tgctcccaga acttcgcaaa
    18661 aaagcagaac aaactggcga ccaaatggat taccaagaag tgaatgactt aacgcaattt
    18721 gctgaccgtc tggataaacg agtatatgat ttacgtctaa gccgtcaaat cactatccaa
    18781 caagcaccgc aaatccgctt aatccaaaat acaaaccagg cacttgctga aaaaatccag
    18841 tcttccatta tgactgcgat tccactttgg aaaaaccaag tagctatcgc gcttaccttg
    18901 ctccgtcaac aacaagccgt agcagctcag cgccaagttt ctgaaacaac gaacgaactt
    18961 ctaaaacgaa acgccgatat gctaaaaaca aacgctatcg aaacagcgcg tgaaaacgaa
    19021 agaggtatcg tagacatcga aacacttaaa gaaacgcagt ccagcttaat tgaaaccttg
    19081 caagaaacgc ttaaaatcca acaagaaggc cgtgctaaac gtgccgtagc agagaaagaa
    19141 cttgtaacaa tggaacaaga acttaaagaa cgtttactgg aaatgaaata atcaaaaagg
    19201 ctagcaccta aatcgtgcta gcctttttta tagtccttct aaacgtaaat tttcaaaata
    19261 aacgggtttt aaattggtta cagtaagccc aatcaaacga atactatcct gaccagtata
    19321 gctttctctt aaaagaaggg ccgccgcttg ataaatttga cttgcatcat tggtatattc
    19381 gtttaaagta agccgcttag taatggttgt aaagtcactg tagcgtagtt ttagtactac
    19441 cgtcttacca tgtttttgta gtttaatgag ccgttcttct acttttttgg caaattgcat
    19501 gaggctttgt tcgagaactc ggctatctaa cacattaaat tcaaaagtag tttctttacc
    19561 aacggacttg cgatcacgat gcggattcac aatgttgtta gaacgacctc gaacatgtcg
    19621 atataaatga tagccatgtt tgtgtaattc gcgaataagg tcccactcgc tccacttctt
    19681 caaatctgct cccgtttcaa ttcctaaacg atgcaatttt tctgcggtta ctttccctac
    19741 cccataaaat ttagtgactg gtatttgttc taaaaaggct tctgcttctt ctggtgtaac
    19801 taccgtaata ccagcaggtt tcttaaaatc agaagcgatt tttgcgataa atttattaaa
    19861 tgatacgccg gcagaagcag ttagaccaag ctcttggtaa atcgtctgct gaatctcgcg
    19921 tgcaaccatt gtggcggatt tcattccttt tttgttttca gttacatcca gataagcttc
    19981 atctaaagag agcggttcga taatatccgt atatctggaa aagatctcgc ggatttgatt
    20041 agaaacctct acataatgag ccatattgcc gtgaataaaa ataccgttcg gacaaagttt
    20101 agcagcttgc ctggtgggca tagctgaatg cacaccgaat ttgcgcgctt cataagaaca
    20161 agtcgcaaca actccgcgtt tattagggtc tccaccaata ataagtggct tccctcgaaa
    20221 ctcaggatgg tcgcgttgtt ccacagatgc ataaaaagcg tccatatcaa tatgaataat
    20281 ttttctactc gtatccataa ctgcatctcc tctgaaacga acaaacgttc ttattcaatt
    20341 ataaaggtta tcctcattaa ttacaagaaa aaaataccct attttcataa gatattttct
    20401 tctgttttat ttctttaaaa atgcaccttt accgaagaat tcgataactt gtggcattac
    20461 ttgataaagt cgtgttgcaa tgttcattac aaaaggtaaa ttgatttcgc gacgcttagt
    20521 tcccataatt tgtactgttt tacgcgcaac cttttctggc tttaacacta atttgccaac
    20581 tgtttctaaa tagtttcctg atttatccgc tacatcgaaa aagtttgtgg caatcgggcc
    20641 aggattaatc gttgtaacat ggattttatc tggcattagt tctaaacgaa gtgcattaga
    20701 aaagcctaaa accgcatatt tcgtggctga ataaacggtt gatttaggtg tagcgatttt
    20761 agcggcttgg gaagcaatat taataatatg tccagctttg cgcgcttgca tttgcggtaa
    20821 aatcagttgt gtgagttgaa ttaagccaag tacattcgta tcaaacattt tttcaattgt
    20881 ctcaaatgga atatctaccg cattttcaaa taaaccaaaa cctgcacagt tgactaacac
    20941 atcaatttga taggatgcat ttatctctgc gctgacttgt ttcacttgct caaaatcagt
    21001 catatctaaa gtaaaataag tcgcttctac tgaaaaatta tcatgtatat ctttttgtaa
    21061 ttctattaat tttttcgtac ttctggctgt tataataaca ttaccaccgg acatagcaac
    21121 ttgtcttgcg atttcagctc caagaccgtt agaagctccg gtaattaaaa ccgttttatt
    21181 cttcaaaaaa gggttcattt tgtcactctc caattggaaa aacagctaag tcataagcta
    21241 tttcagtatt ttcaaaaata gtttttgctt ctattaatag ttctttactt gcatctcgat
    21301 catatcttga gctgatatgg gttaaaatta attttttgac attggcggtt ttagcaagat
    21361 tggctgcttg aagcgttgta gaatgcatgt attctcctgc catttttgct ttatcgcctt
    21421 caaacgttgc ttcatgaacc aaaatatcgg cattcagtgc tagttctagt tcgttagcag
    21481 tttcttttgt atcaccaaaa atactaataa tcttcccttt ttgcggctct ccgatataat
    21541 ttttaccatc aatgacgcgt ccatcagcta atgttacgat ttcgccgttt ttcagctttt
    21601 gaaaaaccgg tcccgcttcg acgccgtccg cttttaattt ttcagcattg agtgcacctt
    21661 gtttatcttt ttcgacaata cggtaaccaa agctacgtac gccatgatca agatcgtcag
    21721 ctgtaactaa aaacatttca tcttcaaaaa tcaaacctgg ctctatttct tcaaaattaa
    21781 ttttatatgt aagccttgtt ccactgagtc ttaaggaagt ttcgacatat tctgctattc
    21841 cggcaggacc gtaaatagtc aaattagagt cccctccttg aaaagaacga ctacttaata
    21901 agcctggcag tccaaaaatg tgatctccgt gcatgtgagt aataaagatt ttttctagtt
    21961 tactaagttt aatttggctt cgcatgattt ggtgttgtgt tgcctctccg caatcaaata
    22021 gccaaattgt atttcgttca tttaacattg aaagtgcgat ggatgtgaca ttacggcctc
    22081 gcgacggtac gcctgctcca gttcctagaa aaacaagttc cataatctgt ttcattccct
    22141 tcccagttcg tgtcttattt tatcatattc ttaaacgaac aggaaataaa catttctaag
    22201 aaaaaaccct tataattcag aaataactgt caaattaaaa aaatattcaa accaaacagt
    22261 tgcacaaatg cttctttatg gataaaatag tatggactaa tgaggaaaat taatagctca
    22321 tttaataagg cctttttttg tggggttctt ttcaaactaa gaaatctttt tcttagcagt
    22381 taatttttgc cattaagaga ataagaaaga gggtaaatga cgtatgacag atgagttaga
    22441 acaaaaagca ctgattacta tttttggcgg tacgggagat ttggcaaatc gcaaacttta
    22501 cccttcgcta tatcatttgt acagtaaggg atctcttggc gacaattttg ctgttattgg
    22561 aacggctcgt cgtgaatgga gtaacgattt cttccgtgat aaagtaaaag agtctatcaa
    22621 agacattgac ggttccgaaa aagacgcgga tgcatttgct tctcacttct actatcaatc
    22681 tcatgatgtg acaaataaag aatcttatgt aactttaaaa gatttgtctg atgaattaga
    22741 tgcaaaatac gaattaggtg gcaatcgcct cttctatctt gcaatggcgc cgaatttctt
    22801 tggaactatc gcaagtcgca ttaaatctga aggatttgta gatacagatg gctttcatcg
    22861 tttaattatc gaaaaaccat ttggtcacga tttagctagt gcagaagaat taaataattc
    22921 gcttcgtcaa gcatttaaag aagatgaaat ttatcgtatt gaccattatt taggaaaaga
    22981 aatgatccaa aatatctcgg ttattcgttt tgcaaattct atcattgaat cgctttggaa
    23041 taatcgttac atcgataaca tccaagttac tttaactgag gtgcttgggg ttgaagatcg
    23101 tgggcgctat tacgatgaaa gtggcgcgct tcgagacatg gttcaaaacc atattctcca
    23161 aatcgtttct ctacttgcga tggagccacc aattaactta acgacacgcg agattcgtca
    23221 tgaaaaagtt cgcgcgcttc gttccttacg cgtttttgaa ggtaaagaag ttcaccaaaa
    23281 ctttattcgt ggtcagtacg gtcctggtga agtaggtggc aaagaactca aaggctatcg
    23341 tcaagaagat aatgtggatc ctcattccaa tacggaaaca tttgttgcag ccaaactaga
    23401 aatcgataac ttccgctggg ctggcgttcc attttatatt cgcacgggta aacgtcttgc
    23461 gaagaaaacg acccaaattg cgattcagtt caaagatgta ccgctgaatt tatttggtca
    23521 acaacaatcg cttggtggta atgtgcttgt tattcatatc caaccggacg aaggtattac
    23581 acttcatttg aacgtcaaag aacctggtca aggtatggtt acaatgccag tcaacttaaa
    23641 ttatattcat tcctctccag acggcatgaa cacacctgag gcttacgaaa aattgattct
    23701 agactgtctt cgcggtgatg cgacttactt ctctcactgg gatgaagtat cactatcatg
    23761 gaactttatt gaccatatag cagatgtttg gacaaatacg aaagatcatt tcccgaacta
    23821 caaatccggt tcgatggggc ctaaagaagc agatgacctc attcaacgcg acggattcca
    23881 gtggttccca atcgattaat caaaaaacca gaaatatggc taccctagcc tatttctggt
    23941 tttctttgtt tacttgcaaa aacccctatg catgttagaa tagagaggaa aactaactag
    24001 ttaaaggagc tcatataatg gctgaaaata ttgatgacta cttagaaaaa ggcatgtatg
    24061 gggcaaaaga gattaatccc gctgagaaga aaaaatattt aggaacttat cgcgaacgtg
    24121 ttttagttgc actcacaaaa gaggaagttt tgacccaaga gtatcttcca gaactagaaa
    24181 aagcaatact agaaaacagt gactccaagc ttcttttaaa cggattactc cattataatt
    24241 ctttacgccc ttatattaaa ctagcagaaa aatgtaaaca tgaattttcg attgttactc
    24301 gtttagaagg tgaaacagat atttacctcg tcctcgcctg tcaaaaagcg gtaaacaagg
    24361 aagacattca tttatataaa gaagcagaag tagaacaaga agaagaacct gtctcgttac
    24421 ttgagaaggt tcgtaaactg tttaattaag tttaccgctt actatttagg aggtcgattt
    24481 atgctacaca ttatcactct gtcactcgct attttgatgg cgttacaaac gatttatttc
    24541 ttcatccgta aaaatgttaa tatgggcgtt atgtttttgc tcataactgc tgcacttctt
    24601 ttactcagta cgatttaatg gaattcctgt ttcgatagct tgctttaaat ttcgctgcat
    24661 gacaccaatt cctgatgccc cgtcaagtgg gaaattaaat acttgcttac catccgtgat
    24721 gctcgtcaat aaccctctga actttttgcc gcctaacatc ggaattggtt cggtagggtt
    24781 tatttgtagt ttctgccact gctcctttaa ttcctcgagt tgaatcgtat cagcactagt
    24841 ccctttcatg gtgaagcgga catcatatgt ttttgaaata atatcgtccg gtcgcaaaaa
    24901 accatatttg ggggataata ttaaatattc atttgcaaac tgttccgcat aggctctact
    24961 taaacgatga aatgttccag tatacacttc gcttgctttt actggaccaa tatctggcga
    25021 cttatcccat atttttggtt ttccagatgc aataataatc aggttcgttt tattggatat
    25081 tcccacatca tcactcttcc ttgtttctct tctgtatctt tttctttgat atgtacgaaa
    25141 tggttgtgtt ttagtacttg tatggatgcc atgttctgct cgtagcttct ggcaaatatg
    25201 cgatgaatgg cgggctgttc ttctagccaa gcaatcatac ctataagcgc ttctgacata
    25261 taacctttat tttgataatc tggtacgatg ctgtagccaa tttcgatttc gcccgtttcg
    25321 tccggatttc cttgtccacc aatttcgccg ataattttat tttcttcttt taaaacgact
    25381 aggcgtgtcc atttaatcat tctatcgtct tttttcacgt tttctaatac atatggtaaa
    25441 taaaaaaaga aatcaattcc tggccagtca ggtgacacat ggtagccact tgctttttcc
    25501 aaagcttctg tcccattaat cgttgcctga atcatttcta gtgtgtaatt aattaatatt
    25561 aatcgatctg tctctaaatt atccacaaca ataacccggc tttcctacta atttattact
    25621 ttcaatttag cagaattaga tagaagaacg caactaatgt gtgatttttt atccgaatta
    25681 ttaaataaat aatagaaaac tataaaaata aaactattct gactatatac ttgacctttc
    25741 atttttgaat gcgcttccat ttaagttata cttcaaatat aagacctggt actaatttca
    25801 gctaaaagtg taagttgctt gaattgtgca aactgacgga aaactt
//
LOCUS       DASDYK010000029        25290 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.029, whole genome shotgun sequence.
ACCESSION   DASDYK010000029 DASDYK010000000
VERSION     DASDYK010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 25290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25290
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.029"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            89..613
                     /locus_tag="U0308_001221"
     CDS             89..613
                     /locus_tag="U0308_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2179 domain-containing protein"
                     /protein_id="HEM2316190.1"
                     /translation="MDNGIFIVATIFIVNILYVTIYTVRLLLTMKGYRYLAALSSVFE
                     MIIYVVALSLVLDNLNNIANVLAYAIGFGVGIIVGMKIEERIALGYITVNVITKEYNL
                     DLPNQIRDLGYGVTSWLASGRDGERMMLEILTQRKNERKLYKHIIEIDNGAFIVSSEP
                     KQIHGGFWVKQVRK"
     gene            819..1307
                     /gene="purE"
                     /locus_tag="U0308_001222"
     CDS             819..1307
                     /gene="purE"
                     /locus_tag="U0308_001222"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEM2316191.1"
                     /translation="MPAVIGVIMGSTSDWDTMKKACDVLDELEIAYEKKVVSAHRTPD
                     LMFQYAEQARERGLKIIIAGAGGAAHLPGMIAAKTTLPVIGVPIKSKALNGMDSLLSI
                     VQMPGGVPVATVAIGESGAVNAGLLAAQILSITDDAITNRLQKRRATLEETVLESSDY
                     LG"
     gene            1300..2424
                     /gene="purK"
                     /locus_tag="U0308_001223"
     CDS             1300..2424
                     /gene="purK"
                     /locus_tag="U0308_001223"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEM2316192.1"
                     /translation="MDKKFLLTNSTIGIIGGGQLGRMLALAAKAMGYRIIVLDPTADC
                     PAAQVSDEQIIADYDDKVALRELSEKADVVTYEFENIDYDALKMTQNLVSVPQGSELL
                     SITQDRILEKAYLESANINIAPYAVIVEQDEIENEIKSIGYPAVLKTAQGGYDGKGQV
                     VIHDARDIETAARLLRYGSCVLEAWIPFEKEISVVVARNLEGQIETFPVAENVHVNNI
                     LHTTTAPADVADDVHEEAEEIARKLADVLQLCGVLAVEMFVTKSGAIYVNELAPRPHN
                     SGHFTIEACSISQFTQHIRAIVGLPLVKPELLKPALMINILGQHVDAVNKQMVNYPHW
                     FVHYYGKKEAKINRKMGHVTVLADEPKAVIQDLEETQIWK"
     gene            2443..3735
                     /gene="purB"
                     /locus_tag="U0308_001224"
     CDS             2443..3735
                     /gene="purB"
                     /locus_tag="U0308_001224"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEM2316193.1"
                     /translation="MLERYTRKEMGNIWTEQNRYQAWLEVEILACEAWAELGDIPKED
                     VAKIRANAKFDVDRIHEIELETRHDVVAFTRSVSESLGAERKWVHYGLTSTDVVDTAN
                     SYLLKQANEILRKDLENFIAIIGEKAKEHKYTVTMGRTHGVHAEPTTFGLKLALWYEE
                     MKRNLERFNFAADGVEFGKISGAVGTYANIDPFVEAYVCEKLGTTPAPISTQTLQRDR
                     HAEYLATLALIATSVEKFAVEVRALQKSEVREVEEFFAKGQKGSSAMPHKRNPIGSEN
                     VTGLARVIRGHMVTAYENVPLWHERDISHSSAERIILPDSTILLDYILNRFGNIVKNL
                     TVFPENMKRNMDRTLGLIYSQRVLLALIDKGLAREAAYDVVQPRAMEAWEKQVPFREL
                     VEQDATIIENLSAEEIADCFDYNYHLKNVDLIFDRLGL"
     gene            3816..4529
                     /locus_tag="U0308_001225"
     CDS             3816..4529
                     /locus_tag="U0308_001225"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEM2316194.1"
                     /translation="MTNELVYEGKAKRLFKTEEAGVLRVAYKDDATALNGVRKESFAG
                     KGELNNQITSLIFSHLAGAGIESHFIRAISETEQLVKEVSIIPLEVVVRNVMAGSLAK
                     RLGKEEGELIPNAIVEFYYKDDALDDPFINDDHVLYLELATTSEMDIIRQAARSINKV
                     LQELFNQMNITLIDFKLEFGRDATGNILLADEISPDTCRLWDKETNQKLDKDVFRRNI
                     GNLTDVYTEVLNRLKQVQN"
     gene            4541..4786
                     /gene="purS"
                     /locus_tag="U0308_001226"
     CDS             4541..4786
                     /gene="purS"
                     /locus_tag="U0308_001226"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEM2316195.1"
                     /translation="MYNVKVYVTLKKSVLDPQGVAVKDAAKSMGYEEVEDVRIGKFME
                     LKVVKSDRDIHEVLNEMCDKLLTNPVMEDYRYEIEEA"
     gene            4790..5473
                     /gene="purQ"
                     /locus_tag="U0308_001227"
     CDS             4790..5473
                     /gene="purQ"
                     /locus_tag="U0308_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HEM2316196.1"
                     /translation="MKFAVIQFPGSNCDLDMLHAIRDSLGEEAEYVWHAETSLAGFDA
                     VLLPGGFSYGDYLRTGAIAKFSSIMPEVLRFAEMGKPVLGVCNGFQILTEIGLLPGAL
                     IRNNNLHFICKTVPLRVANASTMFTGLYKEGEIIQVPVAHGEGNYYCDDETLLKLKDN
                     NQIVFTYDSVNPNGSRADIAGIVNERGNVLGMMPHPERAVEEIIGGTDGLRLFESVVK
                     AWKEEQVNA"
     gene            5466..7685
                     /gene="purL"
                     /locus_tag="U0308_001228"
     CDS             5466..7685
                     /gene="purL"
                     /locus_tag="U0308_001228"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HEM2316197.1"
                     /translation="MPNMEPTTKEIKEQKIYQEMGLTDSEYELVCSILGREPNYTETG
                     LFSVMWSEHCSYKNSKPVLRKFPTEGKQVLQGPGEGAGIVDIGDGLGVAFKVESHNHP
                     SYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTPHAKYLVSEVVAGIAGY
                     GNSIGIPTVGGEIQFDPCYTKNPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTG
                     RDGIHGATFASVEFSEEGEQQRSAVQVGDPFMEKLLLEACLDVIRDHSDILVGIQDMG
                     AAGLVSSSSEMASKAGAGLELIMDDVPQRELNMTPYEMLLSESQERMLLCVKKGHVEE
                     IQALFERYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAEDAPVYHKPSKEPARY
                     QAFQEEESFVPVMEDVVGVWKELLAQPTIASKRHIYEQYDYQVRTDTAVVPGSDAAIV
                     RVRGTEKAIAMTTDCNSRYLYLDPEVGGAIAVAEAARNIVCSGGKPLAITDGLNFGNP
                     EKPEIFWEIEKAADGISAACLELDTPVISGNVSLYNETDGTGIYPTPVIGMVGLVEDL
                     AHITTQDFKNSGDVIFLIGETKAEYSGSELQKLQQGKISGRAPELDLTTEKKYQQLLL
                     TAIQEGLVASSHDLAEGGFGVALAEATFKAGLGADVEVPFELNQLFSESQSRFLVSVK
                     PENEAAFAQLMELEKVYRLGVVTEDDTIRVKHKENQVTAKTTELRSIWEGAIPCLLK"
     gene            7670..9097
                     /gene="purF"
                     /locus_tag="U0308_001229"
     CDS             7670..9097
                     /gene="purF"
                     /locus_tag="U0308_001229"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEM2316198.1"
                     /translation="MLAEVKGLNEECGIFGIWDHPNAAEITYYGLHSLQHRGQEGAGI
                     VSTDGETLKGHRNLGLLADVFKHGELDDLKGKAAIGHVRYATAGQKNLGNVQPFLFHF
                     HSSSLALAHNGNLVNAKSLRRELEEEGAIFQTSSDTEVLAHLIKRSHTGDFVEDLKVA
                     LNKVKGGFAYMLLTEDTMYAALDPNGFRPLSIGRIGDSYVVASETCAFETVGAEFVRD
                     VEPGELIIINDDGLRIEKFTENVTHSICSMEYIYFARPDSNIAGINVHSARKRSGKRL
                     AKEAFIDADVVTGVPDSSISAAIGYAEEAGLPYELGLIKNRYVARTFIQPSQELREQG
                     VRMKLSAVRGVVEGKRVVMIDDSIVRGTTSKRIVQLLREAGAAEVHVRIASPPLAYPC
                     FYGIDIQTRNELIASNYSVDEICRIIGADSLEYLSEEGLVDSIGRPYPNEPYGGLCMA
                     YFNGDYPTPLYDYEAEYLASLEAEK"
     gene            9116..10165
                     /locus_tag="U0308_001230"
     CDS             9116..10165
                     /locus_tag="U0308_001230"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEM2316199.1"
                     /translation="MAENAYSKAGVDVEAGYQVVERIKKHVARTERLGAMGALGSFGG
                     MFDLSSLHLKEPVLVSGTDGVGTKLLLAIEADKHDTIGIDCVAMCVNDILAQGAEPLF
                     FLDYIATGKTDPVKMEQIVKGVADGCEQAGAALIGGETAEMPDMYGAEDYDLAGFTVG
                     AVEKQKLITEGAVKEGDTLIGIPSSGIHSNGYSLVRKIFFKDNELTLDAEISELDVPL
                     VEELLKPTRIYVKPVLEVLKEVDVHGITHVTGGGFVENLPRMLTNDLAVKVELGSWPV
                     LPIFDVMKKYGQLSELEMYEIFNMGIGMVLAVAKADVERTLEVLVQNGEAAYVIGEVT
                     TRENDAVIFTGGTKG"
     gene            10162..10728
                     /gene="purN"
                     /locus_tag="U0308_001231"
     CDS             10162..10728
                     /gene="purN"
                     /locus_tag="U0308_001231"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEM2316200.1"
                     /translation="MNIAIFASGNGSNFQALVDDAFIKPHVKLLVCDKPNAYVLERAN
                     THQIPVFLFEAKNYPDKEAFETEILLELRGLEIDLLVLAGYMRLIGPTLLAEFPEQIV
                     NLHPSLLPEFKGKDAIGQAIQANVSETGVTAHFVDAGMDTGPIIDQVKVPIEHAETVD
                     TLAGKIHQVEHIFYPKVIRGLIQNGGND"
     gene            10734..12263
                     /gene="purH"
                     /locus_tag="U0308_001232"
     CDS             10734..12263
                     /gene="purH"
                     /locus_tag="U0308_001232"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEM2316201.1"
                     /translation="MKRALISVSDKNGIVPFAEKLVELGVEIISTGGTKAAFEQAGVP
                     VTGIEEVTEFPEMLDGRVKTLHPAIHGGLLARRDTAEHMEAIAAHDIKPIDLVVVNLY
                     PFQETIQKSGVTLEEAIENIDIGGPSMLRSAAKNYAAVTVVVDTADYDTVLTELEEHG
                     ATTFETRQRLAAKVFRHTAAYDALIAEYLTNITGETFPEKVTLTYNRKQVLRYGENPH
                     QDAAFYTEPGTVENSISSAKQLHGKELSYNNIRDADAALKIASEFTEPVAVAVKHMNP
                     CGVGVGENIEEAYLKAYEADETSIFGGIVALNKEVDAKTAEHMSKIFLEIIIAPSFSE
                     EAFAILAKKKNIRLLTVPFAGSVKGFEKTSVNGGLLIQASDSVIEDTASYEVVTEKQP
                     TEAEMKALIAQWKIVKHVKSNAIVVGSDKQTLGIGAGQMNRIGSALIALKQAGEKAKG
                     AVLASDAFFPMDDTVEAAAKAGITAIIQPGGSIKDKESIEMANKYGISMVLTHVRHFK
                     H"
     gene            12288..13550
                     /gene="purD"
                     /locus_tag="U0308_001233"
     CDS             12288..13550
                     /gene="purD"
                     /locus_tag="U0308_001233"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEM2316202.1"
                     /translation="MNLLVVGSGGREHAISKKLLESNNVENVYCAPGNDGMRLDNIQL
                     VAISETDKAGLIDFAKKAEIAFVIVGPEVPLLEGVVDALEEAGIKAFGPKANAALIEG
                     SKDFAKQFMEKYAIPTAASKTFTDYAEAKAYLDERGVPIVIKADGLAAGKGVTVALEM
                     EEAVLALKDMMLEEKFGDASLKVVIEDFLAGEEFSLMAFVNGEEVYPMAIAQDHKRAY
                     EGDKGPNTGGMGAYSPVPHISETVVDEAVEKILLPAAKGMVKEGRYFRGILYAGLILT
                     AEGPKVIEFNARFGDPETQVVLPRLESDFAALIDALLHNEKPDVRFKKSGITLGVVLA
                     SAGYPEHYEKGNKLTGLNDVAEDVAIYHAGTKQDENDDFISDGGRVLLLAKEAETMTD
                     ARTLLYPEMQKLDNPNFFYRIDIGTKAE"
     gene            13689..13985
                     /locus_tag="U0308_001234"
     CDS             13689..13985
                     /locus_tag="U0308_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM2316203.1"
                     /translation="MQIEKLRGQGLDEFFQGILTLENLEECYAFFDDVCTVNEIQSMA
                     QRFQVAKMLHDGKTYNVIESETGASTATISRVKRSLHYGNDMYDVVFSRMTKPE"
     gene            14002..14256
                     /locus_tag="U0308_001235"
     CDS             14002..14256
                     /locus_tag="U0308_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316204.1"
                     /translation="MKKFNSKTYQIVIISILALAVIYFVINMIATGTGLDFSLLWHWV
                     FIICFIFTTLANVREKRAIGTAIGLSGILICVTSIVLMAI"
     gene            complement(14299..15654)
                     /locus_tag="U0308_001236"
     CDS             complement(14299..15654)
                     /locus_tag="U0308_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEM2316205.1"
                     /translation="MQENREEWGSKVGFILASAGSAIGIGAIWKLPYVAATAGGGAFF
                     LLFLVLTLLVVMPLLIAEFVIGRGSGGDAVQAYKTLAPGTKWNLLGKLGVVGASILFS
                     FYSVVGGWIITYLIKTLAGGIAGENQASLLHDFQVTTANPWISVGATILFILLNVIVI
                     SRGVVSGIEKMSKFMMPALFILFIVLIIRSLTLPGAMEGVAFFLRPDFSHFTAQTVLI
                     TLGQAFFSLSVGISVMVTYSSYLNRSTSLPQSAISVSLMNVFVSLLAGLAIFPAAFSF
                     NITPDAGPGLLFVILPSIFNQMPFGMLFFIIFLILFLFAALTSSFSMLEATVAPLMNA
                     GVNRKKASLWMGLVIVLMAIPSALSFGVWSDVQIFGLSIFDAADYLVSNIVLPVGALF
                     IAIFVGYRLPRELLLKEFTTSSHFGKKVFILWLFLIKYIAPIAIIFVFLSATGLIDFL
                     F"
     gene            15861..16538
                     /locus_tag="U0308_001237"
     CDS             15861..16538
                     /locus_tag="U0308_001237"
                     /EC_number="2.5.1.n9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenylglyceryl phosphate synthase"
                     /protein_id="HEM2316206.1"
                     /translation="MKHLFKLDPAKNLPMNDLTKLVHSGTNGFIIGGTDNVQIEAVQK
                     LYELLGETDLPIFLEISNESMILPEADHFLIPVVLNTENSKWTHGLHQELIKEMGAFI
                     PWKRVTAEGYVILNKDAKVAHLTEAKTDLTDEDIVAYARLAENIFHLPIFYVEYSGMY
                     GDPEVVRKASAALSNTKFWYGGGIRSKEQAAEMVKYADTIIVGNIIYEDLEKALETAT
                     IFRKKTV"
     gene            16603..18798
                     /gene="pcrA"
                     /locus_tag="U0308_001238"
     CDS             16603..18798
                     /gene="pcrA"
                     /locus_tag="U0308_001238"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase PcrA"
                     /protein_id="HEM2316207.1"
                     /translation="MNAKELVDGLNPEQRRAVESTEGPLLIMAGAGSGKTRVLTHRIA
                     YLVRERGVNPYNILAITFTNKAAREMKSRIGNLMGGEAESIWISTFHSMCVRILRRDI
                     DRIGYERNFTILDGSDQLSVIKGILKEKNVDPKKFEPRGILASISNAKNELITASEYI
                     KEASGFYDKMVGEVYEKYEKKLKKNQALDFDDLIMVTIQLFERVPDVLEYYQRKFQYI
                     HVDEYQDTNHAQYLLVKQLASRFKNLCVVGDSDQSIYGWRGADISNIMSFEKDYPNAK
                     TILLEENYRSTKRILEAANRVIENNGNRKPKNLWTSNAEGKKIFYHKALTEKEEAAYV
                     VMKIQEEVNNSNRPLSDFAILYRTNAQSRVMEEYFMKSNMAYTMVGGTKFYDRKEIKD
                     ILAYLRLISNNEDDISLTRIVNVPKRGVGPGTLDKLNNVATTYDLSLFEVLNRIELAG
                     ISPKISKDLVAFHDLIRGFTQMQDFLSVTELVEEILEKTGYRAMLKNERTIEAQTRLE
                     NIDEFLSVTQNFEKENDDKTLIAFLTDLALVADVDKLEEDNEEQNGAVTLMTLHSAKG
                     LEFPVVFLVGMEEGIFPHSRAIYEEDEMEEERRLAYVGITRAEEELFLTSAYSRMLYG
                     RPSSNQESRFIGEIPRDLLELGNENKLKADKPYAKPRMPQKTTTAYKSSGAETLGWTV
                     GDKASHKKWGVGTVVSVKGEGSGMELDIAFPSPTGVKRLLAEFAPIEKV"
     gene            18824..20839
                     /gene="ligA"
                     /locus_tag="U0308_001239"
     CDS             18824..20839
                     /gene="ligA"
                     /locus_tag="U0308_001239"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEM2316208.1"
                     /translation="MADKKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKI
                     EEAHPEWVTPESPSKRVGGEVLEGFKKVAHDTPMLSLANAFNQEDLADFDRRIRDKVG
                     DDIAYMCELKIDGLAVSLQYENGKYKQGATRGDGTIGEDITANLRTIRSIPMKLQKDY
                     SIEVRGEAFMPKRSFQKLNEIREEEGQMLFANPRNAAAGSLRQLDTKIAASRNLDIFL
                     YAVADFGEMGVETHSAGLDMLETLGLKVNKERRLCNSLEEVYAYIEEWTEKRAGLAYD
                     IDGIVLKLNNLEQQRQMGNTVKSPRWSIAYKFPAEEVPTKLLDIELNVGRTGVITPTA
                     VLEPVRVAGTTVSRASLHNEDLITEKDIRIGDTVLIKKAGDIIPEVIKSITEKRSGSE
                     EPFHMPKNCPACDSELVRLEEEVALRCINPKCPAQIKEGLIHFVSRNAMNIDGLGEKV
                     IIQLFSQHLIKDVADLFFLSKEKLLELERMGEKSVTNLLASIQASKQNSLEKLLFGLG
                     IRHVGAKAAKSLAIHFDTMDNLKVADKETLTSINDIGEKMADSIVTYFANEEVHDLLE
                     ELKRAGVNMTYTGPKLEDMSEEELVFAGKTVVLTGKLEKLTRNDAKALIESLGGNVSG
                     SVSKKTDVVVAGSDAGSKLAKAEELAIPIWSEEDLIEYLPDEGGLNE"
     gene            20836..21951
                     /locus_tag="U0308_001240"
     CDS             20836..21951
                     /locus_tag="U0308_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CamS family sex pheromone protein"
                     /protein_id="HEM2316209.1"
                     /translation="MKKIIIAALGLTLVLSGCAPKLDSNDKVVQKDDSKAETGIMTKN
                     QISSNYYKTVLPYKASKSRGLVVSNIYSRYDINELESGLMRVSQNKYSPDNYLFQEGQ
                     YLDKETLEKWLDRKSDKNPNGLNPASNGNGENRNPIYLAHILEQDYLKQTDKDTVALG
                     GISIALAMNSVDYYQKEKYGDTYEQPISNSELLAQGKEMSTTVLNRIRQTKGLENVPV
                     TIAIYKQGARDAVAPGNYIAYATANGDSLSNWKDIDEKNYVLPSTESAKDHKTDNDNF
                     LNFKKAIEDYYPNFTGVVGRGRYEDGQLAELNIDIPLQFYGEAEIIGFTQYVTDLVGQ
                     HIPKTADLQVNISTSDGPAALITRKANEDAATAHIYD"
     gene            22076..22369
                     /gene="gatC"
                     /locus_tag="U0308_001241"
     CDS             22076..22369
                     /gene="gatC"
                     /locus_tag="U0308_001241"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEM2316210.1"
                     /translation="MSNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNT
                     LDTTNVEPTSHAIDVSNVLREDVATKGLDRKEVLKNAPDEQDGMFKVPTIMEQ"
     gene            22393..23844
                     /gene="gatA"
                     /locus_tag="U0308_001242"
     CDS             22393..23844
                     /gene="gatA"
                     /locus_tag="U0308_001242"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEM2316211.1"
                     /translation="MGLFDFSVKELHDKLVKKEISPFDLVSESFNRIESVEDKVGSFI
                     TLNKEAAFGVAEELGDAGIDPNNMLSGLPIGIKDNIVTKNLRTTAASKILENFDPIYD
                     ATVVSKLKNAQTINIGKLNMDEFAMGSSTETSYFHKTHNPWDLSRVPGGSSGGSASAV
                     AAGEVLFSLGSDTGGSIRQPAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNV
                     EDNAYLLEAISGLDANDSTSINQPVERFSNSLTGDIKGLRIGVPKEYLGEGVDPGVKQ
                     AVLDALKTLEKLGATWDEVSLPHSEYGVASYYILASSEASSNLSRFDGVRYGYRSPNA
                     TTLEELYTKTRSEGFGDEVKRRIMLGTYALSSGYYDAYYKKAQQARTLIKQDFVNVFE
                     NYDVIIGPSSPTTAFKIDGMINDPITMYSNDILTVPINLAGVPAISVPCGFSDGLPVG
                     LQIIGNYFEESLLYKVAHAFEQETTFHKEKPNL"
     gene            23856..25286
                     /gene="gatB"
                     /locus_tag="U0308_001243"
     CDS             23856..25286
                     /gene="gatB"
                     /locus_tag="U0308_001243"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEM2316212.1"
                     /translation="MNFETVIGLEVHVELKTNSKIFSSAPAHFGAEPNTNTTVVDLGM
                     PGVLPVLNKRAVEFGMKAAMAINCEIAKHTKFDRKNYFYPDNPKAYQISQFDKPIGEH
                     GWIEIEVGGKKKKIGITRLHLEEDAGKNTHTSHGYSLVDINRQGTPLIEIVSEPDIRS
                     AEEAYAYLEKLKSIIQYTGVSDVKMEEGSMRCDANISIRPIGQEEFGVKTELKNLNSF
                     NNVRKGIEYEEKRQAEVLKSGGIIDQETRRFEEATGKTSLMRIKEGSDDYRYFPEPDL
                     VDLFIDDAWKERIRAEIPELPDKRQIRYINDLGLPAYDAMVLTLTKEMSDFFEATLAA
                     GADAKQASNWLMGEVSAYLNAEQKELHETGLTPENLAGMIKLIEAGTISSKIAKKVFR
                     ELAQNGGDAEQVVKDKGLVQISDEGALRTIISEILDNNEQSIVDFKNGKDRAVGFLVG
                     QVMKATKGQANPPMVNKLLLEEMNKR"
BASE COUNT         8309 a         4241 c         5698 g         7042 t
ORIGIN      
        1 aagtgtttct tttgtcagct atcttaatgg atgttatatt agtaaaagac tcagtggaat
       61 gtagttttta ggtggagggg ttattttagt ggataacggt atatttatag tggctactat
      121 ttttattgta aatattttgt atgtgacgat ttatacggtg aggttacttt taacgatgaa
      181 aggttatcgt tacttagctg cactttcaag tgtgtttgaa atgattatct atgtagttgc
      241 tcttagtttg gttttggata acttaaataa tattgccaat gttttagcat atgctattgg
      301 atttggtgta ggaattattg ttggtatgaa aattgaagag cgaattgctt taggctatat
      361 tacagtgaat gttattacca aagaatataa cttagactta ccaaatcaaa ttcgagatct
      421 aggttatggg gttactagtt ggcttgcgag tggacgtgat ggtgaacgga tgatgcttga
      481 aattttgact caaagaaaga atgagcggaa attatataaa cacattattg aaattgataa
      541 tggggcattt attgtttcct ctgagccaaa acaaattcac ggtggttttt gggttaaaca
      601 agttcggaaa tgaagaggag cttacctttg atggtagctt ctttttttat ttatttagtg
      661 aaattagata cataatgcta gtaaaaagag caaatacgac ctaaacacga acgttaataa
      721 aatgtaacaa ttaaatgttc gatttttcgt tgacatttat cgtgcctatt gttagaatga
      781 aggagtcgaa aagagattat taaggagttg atcacgtaat gcctgctgta attggtgtca
      841 ttatggggag tacctcagat tgggatacaa tgaaaaaagc atgtgatgta ttagatgaat
      901 tagaaatagc ttatgagaaa aaagtggttt ctgctcatcg tacaccagat ttaatgtttc
      961 aatatgcaga acaagcgcgg gaacgtggtt tgaaaattat tattgccggt gctgggggcg
     1021 cggcgcattt gccaggtatg attgcggcaa agacgacttt gcctgttatt ggtgtgccaa
     1081 ttaaatcaaa agcgttgaat ggaatggatt cgttactttc tattgtacag atgcctggag
     1141 gtgttccggt agcgacagtt gctattggag aaagtggtgc tgtaaatgct ggccttctag
     1201 cggcgcaaat tttatccata acggacgatg caattactaa cagattacaa aaaagacgtg
     1261 ctacactaga agaaacagtt ctagaaagta gtgattatct tggataaaaa atttttactg
     1321 acaaatagta ctattggtat tattggtggc ggacaacttg gacgtatgct tgctcttgcg
     1381 gcgaaagcga tggggtatcg tattattgtt cttgatccta ccgctgattg cccagctgct
     1441 caagtaagtg atgaacaaat tattgctgac tatgatgata aagtagcatt acgcgaactt
     1501 tccgaaaaag cagatgtagt tacatatgaa tttgaaaata tcgactatga tgctttgaaa
     1561 atgacgcaaa acttagtatc tgtcccgcaa ggatcggaat tgctttcgat tacacaggat
     1621 aggattttgg aaaaagctta tctggaatca gctaatatta acattgcgcc gtatgcggtt
     1681 atagtggaac aagatgaaat tgaaaatgaa attaaaagta ttggatatcc tgctgtttta
     1741 aaaacggcac aaggtggata cgacgggaaa gggcaagtgg ttattcatga tgcaagggat
     1801 attgaaacag cagcgagatt gttgcgatac ggctcttgtg tactagaagc ttggattcct
     1861 tttgaaaaag agatttctgt ggttgtcgct cgtaatttag aagggcaaat agaaactttt
     1921 ccagttgcag aaaatgtaca tgtaaataat attttgcata caactacggc tcctgcagat
     1981 gtggcggatg acgtgcatga ggaagcggaa gaaattgcga gaaagttagc agatgtactt
     2041 caattatgtg gtgttttagc agtagaaatg tttgtgacaa aatcaggggc tatttatgta
     2101 aatgaacttg ctccaagacc tcataattct gggcatttta caattgaagc ttgttctatt
     2161 tctcagttta cgcagcatat tcgagcgatt gttggattgc cacttgtaaa accagaactc
     2221 ttaaaaccag ccttaatgat taatatttta gggcaacatg tcgatgcagt gaataaacaa
     2281 atggtgaatt atccacattg gtttgtacat tattatggaa aaaaagaagc gaaaatcaat
     2341 cgcaaaatgg gtcatgttac tgtgcttgct gatgaaccaa aagcggttat acaagattta
     2401 gaagaaacgc aaatttggaa gtaactggag gaatttaaaa ggatgttaga acgttatact
     2461 cgtaaagaaa tgggcaacat ttggacagaa caaaatcgtt atcaggcttg gctagaagtg
     2521 gagattttgg cttgtgaagc atgggcagag cttggtgata ttccgaaaga agatgttgcg
     2581 aagatccgtg ctaatgcaaa gtttgatgtg gatcggattc atgagattga actagaaacg
     2641 agacatgatg ttgtggcatt tactcgttca gtttctgagt cgcttggtgc ggaacgtaaa
     2701 tgggttcatt atggcttaac ttcaacagac gtagtggata cagcgaattc ttatttactt
     2761 aaacaagcga atgagatttt gcgtaaggat ttggaaaatt tcattgcgat tattggcgaa
     2821 aaagcaaaag aacataaata taccgtaaca atgggacgta cacatggtgt tcacgcggaa
     2881 cctactactt ttggcttgaa gcttgctcta tggtacgagg aaatgaaacg taacctagaa
     2941 cgttttaatt ttgcagctga tggtgtggaa ttcgggaaaa tctctggtgc ggtcgggacg
     3001 tatgcgaata ttgatccttt tgtggaggct tacgtatgtg aaaaattagg aacaactcct
     3061 gcgccgattt ctacacaaac gttgcaacgc gatcgccatg cagaatattt ggcaacactt
     3121 gcattaattg caacttctgt agaaaaattt gcggtagaag tacgtgcact gcaaaaaagt
     3181 gaagtgcgtg aagtggaaga attctttgca aaaggacaaa aaggttcatc tgcaatgccg
     3241 cataaacgta atccaattgg ttcggaaaat gtaactggat tagcgcgcgt tattcgcggt
     3301 catatggtta ctgcttatga aaatgtgcca ctttggcatg aacgtgatat ttctcatagc
     3361 tcagcggaac gaattattct gccagattcc actattttac ttgattatat tttgaatcgt
     3421 tttggaaata tcgtgaaaaa cttgacggtg ttcccagaaa atatgaaacg caatatggac
     3481 agaacactgg gacttattta ttcacagcgt gtattactgg cacttattga taaaggttta
     3541 gctcgtgagg cggcgtatga tgtcgtacaa ccaagagcaa tggaagcttg ggaaaaacaa
     3601 gtacctttcc gtgaattagt agaacaagat gcaaccatta ttgaaaacct atctgcggaa
     3661 gaaattgcag attgctttga ttacaactat cacctgaaga atgtcgactt aatttttgat
     3721 cgtttaggat tataattacg ggcagaatac aacctaacct ctttgatatt tattttttca
     3781 aagaggttaa gtaatttata aggagataaa ttatcgtgac taatgaactg gtttatgaag
     3841 gaaaggcaaa acgacttttt aaaacagaag aagcaggtgt cttgcgtgtt gcctataagg
     3901 atgatgcgac agcgctaaac ggggtgcgaa aggaatcttt tgctgggaag ggtgagctta
     3961 ataaccaaat tacatcgctt attttttctc atttagcagg agcgggaata gagagtcatt
     4021 ttattcgagc gatttcggaa acggagcaat tggtgaaaga agtatcaatt attccacttg
     4081 aagtggttgt tcgcaatgtg atggctggga gtcttgcgaa acggcttgga aaagaagaag
     4141 gcgagctaat tccaaatgcg atagtagaat tttactataa agatgatgcg ttagatgacc
     4201 cgtttattaa tgatgaccat gtgctttatt tagagcttgc gacaacgagt gagatggata
     4261 taattcgcca ggctgctcgt tcgattaata aggtgttaca agaattattc aatcaaatga
     4321 atattacgct aattgatttt aaattagaat ttggtcggga tgcgactggg aatattttac
     4381 tagcagatga gatttcgcct gatacatgta gactttggga caaggaaaca aatcaaaagc
     4441 tcgataagga tgtctttcgt cggaatattg gcaatttaac agatgtgtat acagaagtat
     4501 tgaatagatt aaagcaagtt caaaactagg aggccacaaa atgtataatg tcaaagttta
     4561 tgtcacttta aagaaaagcg tattagatcc acaaggtgtt gcagtaaaag atgcagcgaa
     4621 aagcatgggt tatgaggaag tagaagatgt tcgtattggt aaatttatgg aactaaaagt
     4681 tgtgaaatca gatcgagata ttcatgaagt attgaatgaa atgtgcgaca aactgctaac
     4741 aaatccggtg atggaagatt accgatatga aatagaggag gcttaaacga tgaaatttgc
     4801 tgtcattcag ttcccaggtt ctaattgtga tcttgatatg ctacatgcga ttcgcgattc
     4861 tcttggcgag gaggcggaat atgtatggca tgcggaaaca agtcttgcag gctttgacgc
     4921 ggttttactt ccaggtggat tttcttacgg agattacttg cgaactggtg cgattgcgaa
     4981 attttcaagt attatgccag aagttttacg ctttgctgaa atgggaaaac cagtgcttgg
     5041 tgtgtgtaac ggattccaaa ttttaactga aattggttta ctgccaggtg ctttaattag
     5101 aaacaataat ttgcatttta tttgtaagac ggtgccgctt cgtgtggcga atgcaagtac
     5161 gatgtttacc gggctttata aagaaggcga aattatccaa gttccagttg ctcacgggga
     5221 aggtaattat tactgtgacg atgaaacact tttaaaatta aaagataata accaaattgt
     5281 gtttacatat gatagcgtga atccgaatgg tagccgtgcg gatattgcgg ggatcgtaaa
     5341 tgagcgcggt aatgtgcttg gaatgatgcc acacccagaa cgcgcggtag aagaaattat
     5401 tggcggtaca gatggtttaa gacttttcga gtccgttgta aaagcttgga aggaggaaca
     5461 agtaaatgcc taacatggag ccaacgacaa aagaaattaa agaacaaaag atttatcaag
     5521 aaatgggctt aactgatagt gaatatgagc ttgtttgttc gattcttgga cgcgagccta
     5581 attatacaga aactgggctt ttctctgtta tgtggtcgga acattgtagc tataaaaatt
     5641 ctaaaccagt acttcggaaa tttcctacag aaggcaaaca agtattacaa ggacctggtg
     5701 aaggcgctgg gattgtcgat attggcgatg gtttaggtgt tgcttttaaa gtggagagtc
     5761 ataatcatcc atcctacgtg gagccgtatc aaggggctgc gactggggtc ggcgggatta
     5821 tccgtgatgt gttctcgatg ggagctagac cgattgcaat gcttaactcg cttcgttttg
     5881 gtgagttaga tacaccccat gcgaaatact tagttagtga agtcgttgcg ggaatcgcag
     5941 gatacggtaa ctccattggg attccaacgg ttggtggcga aatccaattt gatccttgtt
     6001 atacaaaaaa tccgctagtt aatgcaatgt gtgttggttt aatcgaggcg aaagatattc
     6061 aaaaagggca agcaaaagga attggtaatc cggtgatgta tgttggcgct aaaactggtc
     6121 gtgacgggat tcatggtgct acttttgctt ctgtagagtt tagtgaagaa ggcgaacaac
     6181 aacgctctgc tgtacaggtt ggcgatcctt ttatggagaa attgttgctt gaagcatgtt
     6241 tagatgtgat tcgtgatcat tcagatattt tagtgggaat tcaagatatg ggggctgcag
     6301 gtctcgttag ttcaagttct gaaatggcct caaaagcggg cgctgggcta gaattaatta
     6361 tggatgatgt gccgcaacga gaactaaata tgacgcctta tgaaatgttg ctttctgaat
     6421 cgcaagaacg gatgcttcta tgtgtgaaaa aagggcatgt ggaagaaatc caagcgttat
     6481 ttgaacgtta tggtttagag gctgttgtga ttggtcaagt aacagatgat aaaatgtaca
     6541 aaattattca tcatggtgaa gtagttgcga acgttcctgt agatgcgctt gcagaagatg
     6601 cgccagttta tcataaacct tccaaagagc cagctcgtta tcaagctttc caagaagagg
     6661 aatcgtttgt gccagttatg gaagatgtgg tcggtgtttg gaaggaactg cttgctcagc
     6721 caacgattgc tagtaagcgc catatttatg agcaatatga ttatcaagtt cggacggata
     6781 cagctgttgt acctggttca gatgcggcga ttgttcgtgt gcgtgggacc gagaaggcaa
     6841 ttgccatgac aactgattgt aactcacgct atttgtatct tgatccagaa gtaggcggag
     6901 cgatagcggt tgcggaagcg gcgcgcaata tcgtttgttc tggcgggaaa ccactagcga
     6961 ttacagatgg actgaacttt ggaaatcctg aaaaaccaga aattttttgg gaaattgaaa
     7021 aagcggctga tggtattagt gcggcttgtt tagaacttga tacgcctgtt atctctggta
     7081 atgtatcgct ttataatgaa acagatggta ccggaattta tccaacgcca gtcattggaa
     7141 tggttggttt agtagaagat ttggcacata ttacgacaca agattttaaa aatagtggcg
     7201 atgtgatttt cttaattggt gaaacaaaag ctgaatatag tggttcggaa ttgcaaaaat
     7261 tgcaacaagg gaaaattagc ggacgtgcgc cggaattaga tttaacgaca gagaaaaaat
     7321 accaacaatt acttctaacg gcgattcagg aaggtctagt tgcttctagt cacgatttgg
     7381 cagaaggtgg atttggtgtt gcccttgcgg aagcgacttt taaagcaggg cttggtgcgg
     7441 atgtagaagt accgtttgag ttgaatcaac tattcagtga atcgcaatca cgtttcttag
     7501 tatcggtaaa accggaaaac gaagcagctt ttgcgcaatt aatggaactg gaaaaagtat
     7561 accgccttgg tgtagtaacc gaggatgata cgattcgtgt gaaacataag gaaaatcaag
     7621 ttacagcgaa aacaacggaa ttacgatcca tttgggaagg ggctattcca tgcttgctga
     7681 agtaaaagga cttaacgaag aatgtggtat ttttggtatt tgggatcatc ctaatgcagc
     7741 ggaaatcacc tattatgggt tgcatagttt acaacatcgc ggtcaagaag gtgccggaat
     7801 tgtttcgaca gacggtgaaa cactaaaagg tcaccgaaat ctcggccttt tagcagacgt
     7861 atttaaacat ggtgaactag acgatttaaa aggtaaagca gccattggcc acgttcgata
     7921 tgcgacagct ggtcaaaaaa acttagggaa cgtacaacca tttttatttc actttcatag
     7981 ttcttcttta gcacttgcgc ataatggaaa tttggttaat gcgaaaagtt tacgccgtga
     8041 actagaagaa gaaggcgcta tttttcaaac gagttcggat acagaagtgt tagcgcattt
     8101 aattaaacgt agccatacag gtgattttgt ggaagattta aaagtggctt tgaacaaggt
     8161 taagggtggc tttgcgtaca tgcttctgac ggaagacacg atgtatgcgg cgcttgaccc
     8221 gaatggtttt agaccgcttt cgataggtcg cattggtgat tcttacgtag ttgcttcgga
     8281 aacatgtgcc tttgaaacgg ttggcgctga gtttgtccgc gatgtggagc caggtgaact
     8341 aattattatt aatgatgacg ggcttcgaat tgaaaaattc acggaaaatg tgacgcattc
     8401 gatttgcagt atggaataca tttattttgc gcgacctgac tctaatattg ctggaattaa
     8461 tgtccactcg gcaagaaaac gttctgggaa aagattagca aaagaggctt ttattgatgc
     8521 agatgtggtt acaggtgtac cagattccag tatttctgca gcgattggtt atgcggagga
     8581 agctggtctt ccttacgaac ttggtctcat caaaaataga tatgtggcaa gaacttttat
     8641 ccagccatca caagaactta gggaacaagg cgttagaatg aaactttctg ccgtgcgcgg
     8701 ggttgtggaa ggaaaacgcg ttgtcatgat tgatgattcg attgttcgcg ggacgacaag
     8761 taaacgcatt gtccagcttt tacgtgaagc aggagcggcg gaagttcatg taagaatcgc
     8821 ttctccacca cttgcttatc cttgttttta tggaattgat atccaaacgc gaaatgaatt
     8881 aatcgcttct aattattctg ttgatgaaat ttgtcggatt attggggctg attctttaga
     8941 gtatttgagt gaagaaggtt tagtagattc cattggcaga ccttatccga acgaacctta
     9001 cgggggactt tgtatggctt atttcaacgg cgattaccca acccctttat atgattatga
     9061 agcggaatat ttagcgagct tagaagcaga aaaataatga ggagtgacaa atcgaatggc
     9121 agaaaatgca tatagtaaag caggcgtgga cgtagaagct ggctatcaag ttgtagaacg
     9181 tatcaaaaaa catgtggcta gaacagagcg attaggcgcg atgggggcac ttggttcatt
     9241 tggtggaatg tttgacttaa gtagtttgca tttaaaagaa cctgtccttg tttctggtac
     9301 ggatggtgtt gggacaaaat tacttttggc aattgaagca gataagcatg ataccatcgg
     9361 gattgactgc gtggcaatgt gtgtgaatga cattttagct caaggcgccg agccattatt
     9421 tttcttagat tatatcgcta ctggaaaaac agatccagtg aaaatggaac aaattgttaa
     9481 aggcgtggct gacggctgtg aacaagctgg tgcggcttta attggcggcg aaactgctga
     9541 aatgcctgat atgtacggcg cggaagatta tgatttagct ggttttactg ttggggctgt
     9601 agagaaacag aagctaatta cagaaggcgc agtcaaagaa ggagatacac tcattggtat
     9661 tccatcaagc ggaattcata gtaatggtta ctcccttgtg cgtaaaattt tctttaaaga
     9721 taacgaattg acactcgatg cggaaatcag tgaactagat gtaccgcttg tggaagagct
     9781 acttaaaccg acacggattt atgtgaagcc agttttagaa gtattgaaag aggtagatgt
     9841 gcacggaatt acgcatgtga cgggtggcgg atttgtagag aatttaccgc ggatgttaac
     9901 aaatgattta gctgtcaaag tggagctagg ttcatggccg gtgttgccga tttttgacgt
     9961 tatgaagaaa tacggccaat tgagcgaact tgaaatgtat gaaattttca atatgggcat
    10021 tggtatggtg ttggcagttg cgaaagcgga tgtggaaaga acattagaag tactcgttca
    10081 aaacggggaa gcggcttatg ttattggaga agttacgaca cgtgaaaatg atgcggttat
    10141 tttcacagga ggcacaaaag gatgaatata gccatttttg cttcgggtaa cggttcgaat
    10201 tttcaagctt tagtggatga tgcgtttatt aagcctcatg tgaaactact ggtatgtgat
    10261 aaaccaaatg cttatgtttt agaacgcgca aacacacatc agattccggt gttccttttt
    10321 gaagcgaaaa attatccgga taaagaagct tttgagacag aaattttact agaacttcgc
    10381 gggttggaaa ttgatttgtt agtgctagca ggatatatgc gtttgattgg gccgacttta
    10441 ttagcagaat ttcccgagca aattgtcaac ctgcacccat cgttgttacc tgaattcaaa
    10501 ggaaaagatg caattggtca agcaattcaa gcgaatgttt cagaaactgg tgtcaccgcg
    10561 cactttgtgg atgcgggaat ggatactgga ccaattattg atcaagtgaa agtaccgatt
    10621 gaacatgcgg aaactgtaga tactttagct ggaaaaattc atcaagtaga acatattttt
    10681 tatccaaaag tgattcgagg attaattcaa aatggaggga acgattaatt atcatgaaaa
    10741 gagcgcttat tagtgtgtca gataaaaacg gcatcgtgcc atttgcagaa aaattagtag
    10801 aacttggagt agaaattatt tcgacaggtg gaacaaaagc ggcatttgaa caagctggcg
    10861 taccggtaac aggaatagaa gaagtaactg aatttccaga aatgcttgat ggtcgcgtta
    10921 aaacacttca tccagcaatt catggtgggt tactggcaag acgcgataca gctgaacata
    10981 tggaagctat tgcggcacac gatatcaagc caattgattt agtcgttgta aatttatatc
    11041 ctttccaaga aacgattcaa aaatctggtg ttactttaga agaagcgatt gaaaatattg
    11101 atattggcgg accttcgatg ttacgctcag ctgcgaaaaa ttatgcagcg gtaactgttg
    11161 tagttgatac agcggattac gatacggtac ttacagaact agaagaacac ggcgcaacta
    11221 cttttgaaac gcgccaacgt ctagctgcga aagtttttcg gcacacagcg gcctatgatg
    11281 ctttaattgc agaatactta acgaacatca ctggagaaac tttcccagaa aaagtaacat
    11341 taacttacaa tcgaaaacaa gttttgcgtt atggtgaaaa tcctcaccaa gatgccgctt
    11401 tttatacaga acctggcacg gtagaaaatt caattagttc cgcgaaacag ttgcacggta
    11461 aagagttatc ttacaacaat attcgggatg cagatgcagc acttaaaatt gcaagtgaat
    11521 ttacagagcc ggtcgcggtt gcagtaaaac atatgaatcc atgcggcgtt ggtgttggag
    11581 aaaatattga agaagcttat ttgaaagctt atgaagcgga tgaaacgtct atttttggag
    11641 ggattgttgc cttaaataaa gaagtggatg cgaaaacagc cgaacatatg agcaaaattt
    11701 tcttagaaat tattattgcg ccaagtttct ctgaagaagc gtttgccatt ttagcgaaaa
    11761 agaaaaatat tcgcttgtta actgttccgt ttgccggttc cgtaaaaggt ttcgagaaaa
    11821 catctgtaaa tggtggactt cttattcaag cgagcgattc tgttatagaa gatacagcga
    11881 gttatgaagt agtaacggaa aaacaaccta cagaagcgga aatgaaagca ttaattgctc
    11941 agtggaaaat tgtgaaacat gtaaaatcca atgcgatagt agtaggatct gataaacaaa
    12001 cacttggaat tggtgcagga caaatgaatc gaatcggttc cgcgttaatt gcacttaagc
    12061 aagctggcga gaaagcaaaa ggtgctgtac ttgcctcgga tgcctttttt ccaatggatg
    12121 atacggtcga agctgcggca aaagcgggaa tcacagcgat tattcagcct ggtggatcca
    12181 ttaaagacaa ggaatccatt gagatggcaa acaaatatgg tatttccatg gttctaactc
    12241 atgtacgaca cttcaaacat taatcctcaa aaaggacgtg taaataaatg aacttattag
    12301 tagttggtag cggtggtaga gaacatgcta ttagtaaaaa attattagaa tccaacaatg
    12361 tcgaaaatgt atactgtgct ccgggaaacg acggaatgcg tttagacaac atccaactcg
    12421 tagctatttc tgaaacggat aaagctggtt taattgattt tgctaaaaaa gcagaaattg
    12481 cttttgttat tgttgggcct gaagtgcctc ttttagaagg cgttgtcgat gctctcgaag
    12541 aagctggaat taaagcattc ggtccaaaag caaatgcagc attaattgaa ggcagcaaag
    12601 attttgcgaa acaatttatg gagaaatatg ctattccaac cgcagcatca aaaaccttca
    12661 ccgattatgc ggaagcgaaa gcatacttgg atgagcgcgg tgtgccaatc gtcattaaag
    12721 cagatggact cgctgctgga aaaggagtca ctgtagcgtt agaaatggaa gaagcagttc
    12781 ttgcattaaa agatatgatg ctagaagaaa aattcggtga cgcatctctc aaggtcgtta
    12841 tcgaggactt tttagcggga gaagagtttt cattgatggc gtttgtaaat ggggaagaag
    12901 tttatccaat ggctatcgcg caagatcata aacgcgctta tgaaggcgat aaaggaccaa
    12961 atactggcgg aatgggagct tattctccgg taccacatat ttctgaaaca gtagtagacg
    13021 aagctgtcga aaaaattctt cttccagctg caaaaggaat ggtaaaagaa ggtcgttatt
    13081 tccgcggaat tctctatgct gggcttatct taaccgcaga aggcccaaaa gtaattgagt
    13141 ttaacgcacg ctttggtgat ccggaaacac aagttgtttt gcctcgttta gagagtgatt
    13201 ttgcagcact gatagacgct ttactccata acgaaaaacc agatgtgcgc tttaaaaaat
    13261 cagggattac gctaggagtt gtcctagcaa gcgccggtta tccagagcat tatgaaaaag
    13321 gaaacaaatt aactggtcta aatgatgttg cagaagatgt agcgatttat catgcaggta
    13381 caaaacaaga tgaaaatgac gattttattt ctgatggtgg acgcgtcttg ctactagcaa
    13441 aagaagcaga aacgatgact gatgcacgca cattacttta tccagaaatg caaaaactag
    13501 ataacccgaa tttcttttat cgaattgata ttggcacaaa agcagaataa ttgaaaagta
    13561 ctatctcaag gataaattcc tagatagtac tttttttgtt cattaagtga agagaaacgt
    13621 ttgtgtttta cgcgttggta cgttaaaata tgaaagtagg atatatgaga ttatttggag
    13681 gtaaagatat gcaaatagag aagttgcgtg gacaaggatt ggatgaattc ttccaaggga
    13741 ttttaacgct cgagaattta gaagaatgtt atgctttttt tgatgatgtt tgtacagtga
    13801 atgaaataca gtccatggct caacgtttcc aagtagcaaa aatgcttcat gatggaaaaa
    13861 catataatgt gattgaatct gaaactgggg caagtacagc aactatttca cgtgtaaaac
    13921 gttcacttca ttatggtaat gatatgtatg atgtagtatt ttcaagaatg acgaagccag
    13981 aataagattg tagggattat attgaaaaag tttaatagta aaacctatca gattgtcatc
    14041 atctctattc ttgcgcttgc agttatttat tttgtgatta atatgattgc cactggcacg
    14101 gggcttgatt tttctttact gtggcactgg gtctttatta tttgttttat tttcacgaca
    14161 cttgctaatg ttagagaaaa acgagcaatt ggtacggcga ttggccttag tggaatcttg
    14221 atttgtgtaa caagcattgt ccttatggca atataagaaa agcaatctcg ctaaaaactt
    14281 agcggattgc tttttttgtt aaaacagaaa atcgattaaa ccagttgcgg agaggaagac
    14341 gaaaataatc gcgattggtg caatatattt aataagaaag agccaaagaa taaacacttt
    14401 ttttccaaaa tggctgcttg tggtaaattc ttttaaaagt aattcacgag gtaatcggta
    14461 accaacgaaa attgcgataa ataaagcacc aactggcaag acaatattcg acacaagata
    14521 atcggcagca tcaaaaatac ttagtccgaa aatctgaaca tcgctccaaa cgccaaaact
    14581 aagcgcactt ggaatagcca tcaagacaat cacgagcccc atccaaagac ttgctttttt
    14641 acgattaaca cccgcattca tcagtggcgc aaccgttgct tcaagcatcg agaaactaga
    14701 ggttaatgcg gcgaataaga ataaaatcaa gaaaataata aagaacaaca tcccaaaggg
    14761 catttgattg aaaatcgaag gtaaaataac gaatagcaat ccaggtcccg catctggtgt
    14821 aatattaaac gaaaatgctg ccgggaaaat ggccaatccc gcaagaagcg acacaaacac
    14881 attcataagc gaaaccgaaa tggcagactg cggtaaacta gtcgaccgat ttaaataaga
    14941 actataggtc accattactg aaatccccac actgagtgag aagaaggcct gaccaagcgt
    15001 tataagaacc gtttgcgctg tgaaatgact aaaatctgga cgtaagaaaa atgcgacacc
    15061 ttccatcgca ccaggtagtg ttaaggacct gataattaaa acaataaata aaataaatag
    15121 agctggcatc ataaacttac tcattttttc aattccacta acaactccgc ggctaataac
    15181 aatgacattt agtaaaataa agagaatcgt tgcgccaact gatatccacg ggttagctgt
    15241 cgtcacttgg aaatcatgca gcagacttgc ttgattttcg ccagcaatcc cgccagcaag
    15301 tgttttaatt aagtaagtga taatccaacc accaactacg ctataaaacg aaaataaaat
    15361 acttgcgcct acaacgccta attttccaag taaattccac tttgttccgg gcgcgagtgt
    15421 tttataagct tgaacagcat ctccgccaga gcctcgtcca atcacaaatt ctgcaattaa
    15481 aagtggcatc acaacgagta aagttaaaac taaaaacaat aagaaaaatg cgccacctcc
    15541 tgcagttgca gccacataag gcagtttcca aatcgcacca attcctattg cggacccagc
    15601 ggatgctaat ataaacccga cttttgagcc ccattcttct ctgttttctt gcataatatc
    15661 cccatttcct tttttctatg taaatactca gaagtcttaa taaaatcaaa ttttcctcat
    15721 cataccataa aataaaagct atcccaacag caactggtaa aaaaagctta aaaaaagtta
    15781 aaatttttgg tcgtaagggt gcgatgaaat gtaactaatg ctataataag atatcccatt
    15841 atagagactt ggaggagcaa atgaagcatt tattcaagtt agacccagca aagaatttac
    15901 caatgaatga tctaacgaag ctcgtccatt ctggaaccaa tggatttatt attggtggga
    15961 cggataatgt acaaatcgaa gcagtccaaa agctctacga attattaggt gaaacggact
    16021 tgccgatttt ccttgaaata agcaacgaat ccatgatttt acctgaagca gaccattttt
    16081 taattccagt agtgttgaat acagaaaata gtaaatggac acacggttta caccaggagt
    16141 taatcaaaga aatgggagca tttattcctt ggaaacgagt cacagcagaa ggctacgtta
    16201 ttttaaataa agatgcaaaa gtggctcatt taacagaagc gaagaccgat ttaacggacg
    16261 aagacatcgt tgcctatgcg cggttagcag agaatatatt tcatctgccc attttttatg
    16321 tcgaatatag cggcatgtac ggagatccag aggttgtaag aaaagcaagc gccgcattaa
    16381 gtaatacaaa attttggtat gggggcggaa tacgttcaaa agaacaagct gctgaaatgg
    16441 taaaatatgc ggatacgatt attgttggca atattattta tgaagattta gaaaaagcac
    16501 tagaaaccgc aactattttt aggaagaaaa cggtttgatt ataaagtgta gtatgataaa
    16561 ataagaacaa atgtttgtat ggtggtgtat aggagaatgc aattgaatgc aaaagaatta
    16621 gtggacggat tgaatccgga acaacgaaga gcagtagaaa gtacagaagg acctttatta
    16681 attatggctg gtgccggaag tgggaaaaca cgagttttga cccatcggat agcttattta
    16741 gtgagagaac gtggtgtaaa tccttataat attttagcga ttacgtttac gaacaaagcg
    16801 gctcgcgaga tgaagtcacg gattggcaat ttaatgggcg gagaagcaga atctatttgg
    16861 atatctactt ttcactcgat gtgcgtacga attttacgtc gcgatattga ccggattggc
    16921 tatgaacgta attttactat tttagatggc agtgaccaat tatcggttat taaaggcatt
    16981 ttgaaagaaa agaatgtcga ccctaagaag tttgagccac gggggatttt ggcttctatt
    17041 agcaatgcca aaaatgaact gataactgca agcgaatata ttaaagaagc aagtggtttc
    17101 tatgacaaaa tggtcggcga agtctacgaa aaatacgaga agaaacttaa gaaaaatcaa
    17161 gcactcgatt ttgatgattt aattatggtc accattcaat tatttgaacg tgtgcccgat
    17221 gttttagaat attatcaacg taaatttcag tatattcacg tggatgagta ccaagatacc
    17281 aaccacgcgc agtatttact cgtgaaacag cttgcttctc gtttcaaaaa cttatgcgtc
    17341 gtaggtgact cggatcaatc tatttatggt tggcgcgggg cggacattag taacatcatg
    17401 tccttcgaaa aagattaccc caatgcgaaa accattttgc tagaagaaaa ttaccgttcg
    17461 acaaaacgta ttttagaagc ggcaaaccgt gttatcgaaa ataatggtaa tcgtaaaccg
    17521 aaaaatcttt ggacaagtaa cgcagaaggg aaaaagattt tttatcataa agcattaacg
    17581 gaaaaagaag aagcagccta tgtagttatg aaaattcaag aagaagtaaa taactcgaat
    17641 cgaccacttt ctgactttgc gattctttat agaactaacg cccagtcccg tgtcatggaa
    17701 gaatatttca tgaagtcgaa tatggcgtac acgatggtcg gcggcacgaa gttctatgac
    17761 agaaaagaaa ttaaagacat tttggcgtat ttacgtctta ttagtaataa tgaagatgat
    17821 attagtttga cacgtatcgt taacgttcca aaacgcggcg ttggaccagg tactttagat
    17881 aaactaaata atgtggcgac cacgtatgat ttgagcttgt ttgaagtcct taaccgcatc
    17941 gaactagcgg gaatttcgcc taaaataagc aaagacttag ttgcgtttca tgatttgatt
    18001 cgcggcttca cgcaaatgca agatttctta tccgtaaccg aactcgtaga agaaatcctt
    18061 gaaaaaacag gctaccgcgc aatgctaaaa aatgaacgaa ccattgaagc gcaaacacgt
    18121 ttagaaaata tcgacgagtt tttatctgta acacaaaact ttgaaaagga aaatgacgat
    18181 aaaacgttaa ttgccttttt aactgattta gcactcgttg ctgacgtcga taagttagaa
    18241 gaagacaatg aagaacaaaa cggggctgtc acactgatga cacttcactc tgccaaaggg
    18301 ctagaattcc cagttgtctt tttggttggg atggaagaag ggattttccc acattctaga
    18361 gccatttatg aggaagatga aatggaagaa gagcgtcgac ttgcttacgt tggtattact
    18421 cgagcggaag aagaactttt cctaacgagc gcttactcac ggatgcttta tggtcgtccg
    18481 tcctctaatc aggaatctcg ttttattgga gaaatacctc gagacttact tgagttaggt
    18541 aatgaaaaca aattaaaagc agacaaacca tatgccaaac cgcgtatgcc acaaaaaaca
    18601 actactgcgt ataaatcctc tggagcagaa acgcttggtt ggacagtcgg cgataaagcc
    18661 agtcataaaa aatggggcgt aggaacagtc gtcagtgtca aaggggaagg tagcggaatg
    18721 gaactagata ttgcattccc aagcccaact ggcgtcaaac gattgctcgc agaatttgcg
    18781 ccaattgaaa aagtataaat ttggaaaaag caggtgaaga atgatggctg ataaaaaaag
    18841 gtatgaggaa ctaatcaaca tacttgatca gtacagctat gattattatg taattgataa
    18901 tccaacagta gaagatgccg aatacgatca gaagatgcaa gaattactta aaatagaaga
    18961 agcgcatccc gagtgggtta cacctgagtc tccgtcaaaa cgagttggcg gggaagtttt
    19021 agaaggtttt aaaaaagtag cacatgacac gccgatgtta agtcttgcca acgcttttaa
    19081 ccaagaagac ttggcagact ttgaccgccg aattcgcgac aaagtgggcg atgatattgc
    19141 ttatatgtgc gaacttaaaa ttgacggact agcagtatcc cttcaatacg aaaatggtaa
    19201 atacaaacaa ggtgctactc gtggtgatgg aaccattggg gaagacatta ctgctaactt
    19261 gcgtacgatt cgctccatcc caatgaaact tcaaaaggac tattccattg aagttcgcgg
    19321 tgaagctttc atgccaaaac gctccttcca aaaactaaat gaaattcgcg aagaagaagg
    19381 ccagatgtta tttgccaatc cacgaaatgc tgcggctggc tcgcttcgac aattggacac
    19441 aaaaatcgca gcgtcgagaa atctcgatat cttcctttat gcagtagcag attttggtga
    19501 aatgggcgtt gaaactcata gcgcaggctt agatatgctt gaaacacttg gtcttaaagt
    19561 caataaagaa cgccgacttt gcaacagttt agaagaagtt tatgcgtaca ttgaagaatg
    19621 gacagaaaaa cgcgccggat tagcatacga tattgacggc attgttttaa aattaaacaa
    19681 cttagagcaa caacgccaaa tgggaaacac cgttaaatcg cctcgttggt cgattgctta
    19741 taaattccca gccgaagaag taccaactaa gttactcgat atcgaattaa atgttggtag
    19801 aactggtgtg ataactccca ccgccgtgtt agaaccagtg cgagtggcag ggacaaccgt
    19861 tagccgcgct tcgcttcata atgaagacct aattacagag aaagatatcc gcattggcga
    19921 caccgtttta atcaaaaaag ctggcgatat cattccagaa gtcattaaaa gcatcaccga
    19981 aaaacgtagc ggaagtgaag aacctttcca tatgccaaaa aattgtccag cgtgcgatag
    20041 tgaattggtt cggttagaag aagaagtggc gttaagatgt attaatccta aatgcccagc
    20101 tcaaataaaa gaaggactta tccactttgt ctccagaaat gcgatgaaca ttgatggcct
    20161 cggcgaaaaa gtaattatcc agctattttc acagcattta attaaagatg tagcagattt
    20221 gtttttcctt tcgaaggaga aactgttaga attagaaaga atgggtgaga aatcggtaac
    20281 taatttactg gcatccatcc aagcaagtaa acaaaactcg cttgaaaaat tacttttcgg
    20341 cttaggcatt cgccatgttg gtgcaaaagc cgccaaatca cttgccattc atttcgatac
    20401 aatggataat ttgaaagtag cagacaaaga aacactgaca agtattaacg acattggtga
    20461 aaaaatggca gacagtattg tcacttattt cgcgaatgaa gaagtacatg atttattaga
    20521 agaactaaaa agggctggcg tcaatatgac ctatacaggg ccaaaactag aagatatgtc
    20581 cgaggaagaa cttgttttcg caggtaaaac cgttgtctta actgggaaac tagaaaagtt
    20641 aacgcggaat gatgcaaaag cattaatcga atccctcgga ggaaatgttt ctggaagcgt
    20701 cagtaagaaa acggatgttg ttgtagctgg cagtgatgct ggttctaaat tagccaaagc
    20761 ggaagaacta gccattccta tttggtcaga agaagactta atagagtact taccagacga
    20821 aggtggatta aacgaatgaa aaaaatcata atagcagcgc tcggcttaac gcttgtgctc
    20881 tctggctgtg ccccaaaact tgactcaaat gataaagtgg tacaaaaaga tgattcaaaa
    20941 gcagagacgg gcatcatgac aaaaaatcaa atctcatcca attattacaa aaccgtacta
    21001 ccatacaaag caagcaaatc ccgtggactt gtcgtatcga atatttattc acgatatgat
    21061 attaacgaat tagaatctgg tttaatgcgt gtttcgcaaa ataaatactc cccagataat
    21121 tatcttttcc aagaagggca atatttggat aaagaaacgt tagaaaaatg gttagataga
    21181 aaaagcgata aaaatccgaa tggtttaaac ccagccagta atggtaacgg tgagaatcgt
    21241 aatccaatct atctagcaca tattttagaa caagattatt taaaacaaac ggacaaagat
    21301 acggttgctc ttggtgggat ttctattgcc cttgcgatga attcggtcga ttattaccaa
    21361 aaagaaaaat acggagacac ctatgaacaa ccaattagta atagtgaatt attagcacaa
    21421 gggaaagaaa tgtctaccac tgtgttaaat cgaattcgcc aaacaaaagg tttagaaaat
    21481 gttcctgtaa cgattgccat ttacaaacaa ggagctcgtg atgcggtagc tccaggaaat
    21541 tacattgctt atgcaactgc aaatggggac agtctttcta attggaaaga tatagatgaa
    21601 aaaaattatg ttttaccatc aactgaatct gctaaagatc acaaaacaga taatgacaat
    21661 ttcttgaatt tcaaaaaagc aattgaagac tattatccaa actttacagg tgtcgttggt
    21721 cgtggtagat atgaagacgg tcaactagca gaattaaaca ttgatattcc gttacaattt
    21781 tatggtgaag cagagattat cggctttaca cagtatgtga cggatttagt cggacaacat
    21841 attccgaaga cagctgattt gcaagtcaat atttctacat ctgatggtcc agctgcattg
    21901 attacaagaa aagcaaatga agatgcagca actgctcaca tttacgatta ataaaaaaca
    21961 atgcgaattg ttctttcctg ttgtataatt atgcaggaga ggacagttct tcccattttt
    22021 aacaggcggg aagcactacc gcgtagtaag taccactaaa aaggaggatg gcattttgtc
    22081 aaatatatca aaagaaacag tagaaaaagt agcaaatctt gccaaactag aagtatcaga
    22141 aacagaagca acagccttcg ctggtcagct tggtaaaatt attgagctag tagagcaatt
    22201 aaatacatta gatacaacga atgtagaacc taccagccat gcaatcgacg tatcaaacgt
    22261 attacgtgaa gatgtggcaa caaaagggtt ggatcgcaaa gaagtactaa aaaatgcgcc
    22321 tgatgaacaa gatggcatgt tcaaagtacc gacaattatg gaacaataaa taggctaagg
    22381 agggaaaata ttttgggttt atttgatttt tcagtaaaag aactacatga taaattagtt
    22441 aaaaaagaga tttcaccatt cgatttagta tcagaatctt tcaaccgaat tgaatctgta
    22501 gaggacaaag ttggttcttt tattacttta aataaagagg cagcatttgg tgtagcagaa
    22561 gaacttggag atgcgggcat agatccaaac aacatgcttt ctggtcttcc aattgggatt
    22621 aaagataata tcgtgacaaa aaacttacgt acaacagcag caagtaaaat tttagaaaac
    22681 ttcgatccaa tttatgatgc gaccgtcgtt tctaaattaa aaaatgcgca aacaattaat
    22741 atcggaaaat taaacatgga tgaatttgcg atgggatctt cgacagaaac atcgtatttc
    22801 cacaaaacac ataacccatg ggatttatca agagttcctg gtggttcttc aggtggtagt
    22861 gcatccgcag ttgcagcagg cgaagtttta ttctcgcttg gtagtgacac tggtggatcg
    22921 attcgccaac cagcagcttt ttgtggggta gtcggaatga aacctacata tggccgtgta
    22981 tctcgttttg gtttaattgc ctttgcgtct tctttagacc aaatcggccc aattacaaaa
    23041 aatgtagaag acaacgctta tttattagaa gctatttctg gtttagatgc gaatgattct
    23101 acatcgatta accaaccagt tgaacgcttc tcaaatagct taacaggaga cattaaaggc
    23161 ttacgcatcg gtgttccaaa agaatatctt ggcgaaggcg ttgatcctgg cgtaaaacaa
    23221 gctgtattag atgcgcttaa aacactcgaa aaactgggcg ctacttggga tgaagtttct
    23281 ttacctcatt ctgaatacgg tgtagcaagt tattacattt tagcatctag tgaagcttct
    23341 tctaatctat ctcgttttga cggcgttcgt tacggatacc gttctccaaa cgcaactact
    23401 ttagaagaac tttatacaaa aactcgttct gaaggctttg gcgatgaagt aaaacgtcgt
    23461 attatgcttg gaacatatgc gttaagctct ggttattacg atgcttacta caaaaaagcg
    23521 caacaagcgc gtacgttaat taagcaagac tttgttaatg tatttgaaaa ctatgatgtt
    23581 attatcggac ctagttcccc gacaacagca tttaaaattg acggaatgat taatgatcca
    23641 attacaatgt attccaatga tattttgact gttccaatta acttagcagg cgtaccagct
    23701 atttctgttc cttgtggatt ctcggatggt ttaccagttg gcttgcaaat tatcggtaac
    23761 tactttgaag aatccttact ttacaaagta gcgcatgctt ttgaacaaga aacaacattc
    23821 cataaagaaa aaccaaactt ataggaggcg tagcaatgaa ttttgaaaca gttattggac
    23881 ttgaggttca cgtagagtta aaaaccaatt caaaaatatt ttcttctgcg ccagctcatt
    23941 ttggagcaga accaaataca aatacaaccg tggtagactt aggtatgcca ggtgttttac
    24001 cagttttaaa taaacgtgca gtggaatttg gtatgaaagc ggctatggcg attaactgtg
    24061 aaattgctaa acatacaaaa ttcgaccgta aaaactattt ttatccagat aatccgaaag
    24121 cataccaaat ttctcaattc gataaaccaa ttggcgaaca tggctggatt gaaatcgaag
    24181 ttggcggtaa aaagaaaaaa attggcatca ctcgtcttca tttagaagaa gatgctggga
    24241 aaaataccca tacttctcat ggttattcgt tagtggatat taaccgtcaa ggaacaccac
    24301 ttatcgaaat cgtttcagaa ccagacattc gttctgcaga agaagcttat gcctacttag
    24361 aaaaattaaa atctatcatt caatacactg gcgtatccga tgtgaaaatg gaagaaggtt
    24421 caatgcgctg tgacgccaat atttctatcc gaccaatcgg ccaagaagaa tttggcgtaa
    24481 aaacagaact taaaaaccta aactccttca acaacgtacg taaaggtatc gaatatgaag
    24541 aaaaacgcca agctgaagtg cttaagtctg gcgggattat cgatcaagaa actcgtcgtt
    24601 ttgaagaagc aactggaaaa acctctttga tgcgaattaa agaaggatcc gacgattatc
    24661 gttatttccc agaaccagat ttagtagatt tatttattga tgacgcttgg aaagaacgta
    24721 ttcgtgcaga aattcctgaa cttccagaca aacgtcaaat tcgttacatt aacgatcttg
    24781 gtttgccagc atatgatgca atggttctca cgcttacaaa agaaatgtct gacttttttg
    24841 aagcaactct tgcagctgga gcagatgcga aacaagcatc aaactggcta atgggcgaag
    24901 tttctgccta cttaaacgca gaacaaaaag aacttcatga aacaggacta actcctgaaa
    24961 atcttgctgg catgattaaa ttaatcgaag ctggtactat ttcttctaaa atcgctaaaa
    25021 aagttttccg cgaattagcg caaaatggtg gcgatgcaga gcaagtagta aaagacaaag
    25081 gacttgtcca aatttccgat gaaggagctt tacgcactat cattagcgaa attctagata
    25141 acaatgagca atctattgtc gacttcaaaa atggtaagga tcgtgcggtt ggattcttag
    25201 ttggccaagt aatgaaagca accaaagggc aagcaaaccc accaatggtt aataaattat
    25261 tactagaaga aatgaacaaa cgttaaacaa
//
LOCUS       DASDYK010000030        25022 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.030, whole genome shotgun sequence.
ACCESSION   DASDYK010000030 DASDYK010000000
VERSION     DASDYK010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 25022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25022
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.030"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            229..1089
                     /locus_tag="U0308_001244"
     CDS             229..1089
                     /locus_tag="U0308_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GRP family sugar transporter"
                     /protein_id="HEM2316213.1"
                     /translation="MNIMIALIPALLWGTVPLIITKFGGSTRQQTMGMTLGALTFAVI
                     VFFFTDPVYTLKTVGISFITGCLWTVGQMFQLQAFKIIGVSKAMPISTGMQLVGTTLC
                     GVILFHEWDTTLRIILGFIALALIVGGIFLTSYAEKEEDGTNALKQGLITLFISACGY
                     VGLVVLIQGFKIDGINAILPQAIGMVLSALIMTHSGGTEKRFNKRTLLLTIPGIIWAA
                     GNVAMVHANQLVGVATGFSLSQLGVVISTIGGIVLLKEKKTQKEMFFVIVGVVLVVLG
                     GILIGVAKGA"
     gene            1158..3155
                     /gene="metG"
                     /locus_tag="U0308_001245"
     CDS             1158..3155
                     /gene="metG"
                     /locus_tag="U0308_001245"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEM2316214.1"
                     /translation="MLPEEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKG
                     YDVFYLTGTDEHGQKIQAKAKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQD
                     RHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAP
                     SGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAV
                     SRTTFDWGIKVPGNPKHVVYVWIDALSNYITALGYNTDNDTKFQKYWPADVQIVGKEI
                     VRFHTIYWPIMLMALDLPLPKMVFGHGWILMKDGKMSKSKGNVVDPYMLIDRYGLDAL
                     RYYLLREVPFGSDGLFTPEDFVDRVNFDLANDLGNLLNRTVAMINKYFDGEIPAYQGN
                     VTEFDQTLVDFKNNVVKEYEGSMDHMQFSVALNQLWSLISRTNKYIDETAPWTLAKDE
                     DKRTELASVMTHLAENLRIIAVLLQPFLTRTPGEIFLQLGLQEENLKKWDSIYGYGEI
                     PAGTTVVKKGTPIFPRLEAEVEVTYIQDEMKGSAPAPAKEAAEVEALETPQIGIEDFD
                     KIDLRVAEVKQVDKVKKADKLLCFQLDLGEGKLRQVLSGIAEFYQPEELIGKKVIVVS
                     NLKPVKLRGLMSEGMILSGEKDGKLSVIEASSALPNGAKVK"
     gene            3319..4533
                     /locus_tag="U0308_001246"
     CDS             3319..4533
                     /locus_tag="U0308_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family transcriptional regulator"
                     /protein_id="HEM2316215.1"
                     /translation="MDILRKGNKDLIKDINRYTVLNLIREKGEITRTEIAKKCDFGMS
                     TLTYILDDLQQEGIILEGAETSSTGGRRAKLVRFNKDYGFVVSVKVEEEQLLFALTDL
                     NAEIMENTSIPFSSEKKPEEAIELIAKNVKKMCENRDMNHLLGVGIAISGLVNRRKGT
                     VIRSTMLGWENVALEAMLHAYFPDIPVYVDKNINCYTLAELWLGEGKQSNNFATVSVG
                     AGLGLSVVINRQIYYGAQGGAGEFGHTTIQPGGYKCHCGQKGCLEMYASEFYFRNRGE
                     ELKEAYPTSELKDFHFDKVAKSARAGDEMATELMGKMGEYLGYGIRNIINTFNPEKVI
                     IVGEGLHHRDLFLTKIDEIASQNFFSGAGFETEITTTSLEDPAWLQGAALLVIHQLFQ
                     VPIYEEEQTLLR"
     gene            4569..5447
                     /locus_tag="U0308_001247"
     CDS             4569..5447
                     /locus_tag="U0308_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2316216.1"
                     /translation="MVGMTRKKTLFWLCIFLLPNLLGFLIFIAIPILGSLGISFTDWD
                     LVSTIHFTGFENYKRLFNDPEFWKSFRNTITFIIGYLPSVMILGLACALMLNQKIKLR
                     PFFRAVYFLPVITSWVAVSLVWKWLFNPSYGLINYFLSLIGIAGPNWLTDPQTAMIAV
                     IITSAWKDIGFVMVLFLGGLQNISPSYYEAANMDGASKLRQLFSITIPLLTPTTFFVT
                     IISLINSFQVFDQVMIMTEGGPSGATMTLVQNIYNHAFRYFEMGYASAMSWILFIVIF
                     IITIIQNKLQKRWSNY"
     gene            5447..6295
                     /locus_tag="U0308_001248"
     CDS             5447..6295
                     /locus_tag="U0308_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM2316217.1"
                     /translation="MKTEKSGSPKWQLFKNILTYTIICLGGIIMLMPFVWMVSTAFKT
                     GAANMVLPPQFIPKEPTTANFTQVFEMFPMLRFLVNSVVVAVVTTLGQMLFCSMAAYA
                     FARIPFWGRDKLFLLYLATMMVPAQVTMIPQFILMKQFGWLDSYAGLIVPALFSVFGT
                     FLLRQAFMGIPKELEEAAFMDGANHFTIFRKVILPLAKPTFATLGILTFMQSWNSYLW
                     PLIVTSSQEMATLPLGLSLLQGRYGTNYGLMMAGVLISVIPILAVYLFAQKYFIQGMA
                     MSGMKE"
     gene            6323..7579
                     /locus_tag="U0308_001249"
     CDS             6323..7579
                     /locus_tag="U0308_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEM2316218.1"
                     /translation="MKKGLLLLMVVVLSVFGLSACGGGSSSGDKTEITYYQFSAPADG
                     KALDEMVKEFEKQNPDIKVNVQTIAFNDYFTKLQTQIAGGDAPDAFELNYETFMQYAE
                     KGVLADLTSYIEKDKDFDPSTLNKQAYDAFKYDGKQYGMVESFSNVVTIYNKDLFDKA
                     GVEYPTADWTWKDEEAAAKKLTDAKNKVWGTSQPVTMNEFYKVAAQNGGSIFNEDLTK
                     TTINSPENVAALTHLTNEVTDSKVAPSPADLSGQLPEDLFMNGQIAMLHTGIWLFDMF
                     QDAPFKWDVQVEAGNTQKATHFFANGIGVSKDSDKKEAAFKFASFMSANEEAAKIRID
                     NNWELPATENKEILQPYLDATPPDNREAVFESLQYMVLPPVVKDWNKISDYTNSEFEK
                     VLNGDSTPEKALKNSEDNINKTMGFK"
     gene            7740..10964
                     /locus_tag="U0308_001250"
     CDS             7740..10964
                     /locus_tag="U0308_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009925034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 31 protein"
                     /protein_id="HEM2316219.1"
                     /translation="METKPNFTTDSVLETASWLWLSSKINHYDREEVEPVIAFLVENW
                     NRPEKSIWGSAENDIYLATISSVYSALLDVKNTFPKPELQQTITIIRDYCFDNLLKGD
                     SILTGFNTRKVSTDQLLSVLPFGLFSPEDLVMVAAVGKMEQQLVQDDGVLPYSGAPRV
                     NSFATALMALYFLEKSDQDKALHYLNMAMKMEDNDELGAIFIEINQAFRAMESEVTAH
                     ISHDPFGHENRYEQQLTERTPHYPETEMHFSAACEVISEVEPIQVELVLKEKDWTILC
                     EKKEKNDVQIWEALVPPLEEVGEYTYYFRATMKDQTTLTSDDYTVEPIWKHWSEEAAV
                     CETEQGLMVLFKENPSSIIPVEFAAKSDELVIGLKPSFEASNVKTKSSGQLKKDDLEI
                     IVSNNPVRLEVHFKGNLILESHKIYPALQWYTDKAGAINKVKLHLDAPKEEEYYGFGE
                     RYNALGQRGNVLDCFVYNQYRDQGTRTYIPMPFYHTNRDYSVFVDTARYTSFDLGNQL
                     ADKHTITVEINGCDTDICLLMGDIRSAVANYMKKTGKPAMVPVWALGPWMSSNNWDRE
                     SVVRTEVETTQELQIPSTVVVLEQWSDEATYYMFNDAEYDEKAPSEAYNYDEIRFPSW
                     GRWPDPKGMVDYIHDNKMKLILWQIPIQKYLNRQQHPLKDREEAYMIEKGYVVKNPDG
                     SPYRIPENWFTESLIMDFSNEEGKKWWFDKRQYLIDIGVDGFKTDGGEFVFGEGLQFA
                     DGRRGDEMRNLYPNDYVEAYYQFAQQNDGMTFSRAGYTGAQNFPAHWAGDERSTFDAF
                     RRSLIAGLSAGFSGIPFWSFDFAGFNGDIPTAELFIRSAEMATFCPIMQYHAESKAEF
                     NQDRTPWNIASRTGDDSVIPIYRHFANVRMNILPYIYNESLKCVETGLPMMRALLLDY
                     KEDPRVSDMYDQYLFGEAMLIAPVIEDGVRSREVYLPEGTWYDFWNGTKVNGPTLRKC
                     KADKEEIPVFIRGGKAVLCNVDATLKLGSWVGNTVEEYDTPLLKIYVDGDFTEEMTDH
                     LSEKWLVKVTENADEVVVSVQTNTPAYEVEVIGTTKKVQIKKGR"
     gene            10967..13258
                     /locus_tag="U0308_001251"
     CDS             10967..13258
                     /locus_tag="U0308_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 31 protein"
                     /protein_id="HEM2316220.1"
                     /translation="MDASTSFAILPSNVKQKTAFERKVNQVKTASWANNCLTGTLDIG
                     QFSCYFVNEKIARVTVNPFGEVDLTPSIAAIHDTEKQAAKFTETTDGYELHFADKEII
                     ICKNPFQIIMKQAGKRIFQTEGLAINRYKEHQISIQSEPGTAIFGLGEKTGALNKAGS
                     IISMWNTDVYSPHNKDTVELYQSIPFMIADTAETTYGLFYDNSHRTEFDFQSFEEMYT
                     ILAEGGQANLYVIFGEDTKEVVANYTDLTGKTPLPPKWSLGYHQSRYSYTSEEEVERI
                     ANTFKEKKIPLDCVFMDIHYMDDFRVFTFNPDTFPNGPELIARLREQNIDVVPIVDPG
                     IKKDVDYSVYQEGIKHNYFCTKLEGSIYYGDVWPGVSAFPDFLSTTVQHWWGGLHKFY
                     TDLGIRGIWNDMNEPSVFNESKTMDLDVVHNLDGKNVTHKEAHNLYGLYMSKATFEGL
                     KRLVPNERPFSLTRAGYAGVQRYSAVWTGDNRSHWEHLEMSLPMIMNLGLSGVAFTGA
                     DVGGFSSDCTKEMLIRWTQAGAFLPYFRNHCVQDSIYQEPWAFGADAEKIVKQYIELR
                     YAFLPYIYTEFQKTAESGLPLVRPLYMEFKDERDLIQVNDQFMLGENILVAPIVREGQ
                     VKRLVRLPRGLWFNYWTKEQFVGGDYIIADAPIDTMPIYIKAGTILPVGSSVQNTKET
                     QDLTLEVYLDGDVASGYVYNDDGKSYHYESGAASKTTLTATFKNGEVLINATHQGEAN
                     LQHKVTTIQVFGEKTDKITRAGI"
     gene            13262..14923
                     /locus_tag="U0308_001252"
     CDS             13262..14923
                     /locus_tag="U0308_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HEM2316221.1"
                     /translation="MKEKDWWKKSVVYQIYPKSFNDSNGDGVGDIQGIIEKLDYLKEL
                     GVDVIWLSPVYDSPQDDNGYDIRDYQKIYEEYGDMATFDQLLQGLHDREMKLVMDLVV
                     NHTSDEHKWFEESRKSKDNPYRDYYFWREENEINNWGSIFSGPAWELDEKTGEYYLHL
                     FSKKQPDLNWENPKLRQDVYNMMKFWLDKGIDGFRMDVINFISKNTDFPDGPVPDGQI
                     YGDAGNDFCNGPRIHEFLQEMNQEVTSKYDVMTVGEMPGASTTDAQIYTNPANNEVDM
                     IFTFEHMNLDSDGDNKWDLKPIYLPDLKENMSEWQVALQENGWNSLYWNNHDQPRIVS
                     RFGNDNRFRVRSAKMLATCLHMMKGTPYIYQGEEIGMTNVHFETLDDYRDIETLNMYK
                     ERKEQGHSHESIMQSIYTKGRDNARTPYQWDNSENAGFTTGTPWLKVNPRYTEINNEE
                     ALKNPDSIFYYYQNLIKLRKTTEIITTGNYRLLLPKDEAIFAYERYTENEKLVVLCNF
                     TEEEQVISDENILNEIQKGSVLVNNVPNIIEGTLRPYEAIVYQIK"
     gene            14996..15793
                     /locus_tag="U0308_001253"
     CDS             14996..15793
                     /locus_tag="U0308_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEM2316222.1"
                     /translation="MILLGGILLLFDTHVHLNDEAFDDDIEEVIKRAQENDVTRMAVV
                     GFNKETIDRALELAEKYDFISLIVGWHPTDAITFTDEDLEWLRDLALTHPKVVALGEM
                     GLDYHWDTSPKETQFEVFRKQIRLAKEVNLPIVIHNREATEDVVRILQEEHAEEVGGI
                     MHCFGETVEVMEACLAMNFYISFGGTVTFKNAKLPKIAAQAIPIDRLLIETDAPYLAP
                     TPNRGKRNEPGYVKLVAEKIAELKEMKYSEIATHSTENAKKLFKIKD"
     gene            16085..17299
                     /locus_tag="U0308_001254"
     CDS             16085..17299
                     /locus_tag="U0308_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="resuscitation-promoting factor"
                     /protein_id="HEM2316223.1"
                     /translation="MTMENSSNVAQSSKWKLPIMIAGFVIVVALVFYFVFEGTKNDIT
                     IVNAGEKIESRTHAKTVSEALDEAGIKVSERDEIAPGKNAEIKDGMEIKYLPARQITI
                     NDNGTKKDVWSTKANVADLLKDENITTRPQDVLNVALDTKLKNGLEVNINRAIQLSLQ
                     NGAKKDTVWTTKTKVSDLLAEKNIKLDQDDRVSPAKDSNLKEKMTVEVTYVNSKAEKK
                     NEQVKFETVYKEDDSLNKGVEKVVQEGKNGEKVVEYKVTFENGKEKKRDVIKENVTSK
                     KTDKVVVRGTKEKVVATPVSNVSTPSTTSSSSSTPSGGKTYRMESTAYSGGGTTAYGI
                     NLSANPGLKVIAVDPRIIPLGSKVWVEGYGEAIAGDTGGAIKGNIVDVYFPNESQCYS
                     WGRRMVTVKVLN"
     gene            17401..17976
                     /gene="rnmV"
                     /locus_tag="U0308_001255"
     CDS             17401..17976
                     /gene="rnmV"
                     /locus_tag="U0308_001255"
                     /EC_number="3.1.26.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease M5"
                     /protein_id="HEM2316224.1"
                     /translation="MNGKPVIHEFIVVEGRDDTTAINRSVIADTIETNGSALSQETIE
                     KIRHAQELRGVIIFTDPDFPGEKIRKQIDSAVPGCKHAFINRQDALPKAGRGLGVEHA
                     SSANIREALENFHTSGTPAEKQFISKDILIHLGLLGGAGAKERREKIGNILKIGYTNG
                     KQLQTRLESFAISEDQLVAACQKIMQEEENE"
     gene            17969..18856
                     /gene="rsmA"
                     /locus_tag="U0308_001256"
     CDS             17969..18856
                     /gene="rsmA"
                     /locus_tag="U0308_001256"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEM2316225.1"
                     /translation="MSKDIATPGRTTEILKKYGFLFKKSLGQNFLIDSNILTRITDTA
                     EITKETNVIEIGPGIGALTEQLAKTANEVVAFEIDQRLLPILDDTLSAYNNIQVVHGD
                     VLKADVEEVIAEQFAKPDLPLKIVANLPYYVTTPIILKLLHDNIPADSMTFMLQKEVA
                     DRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKEPLAE
                     VNDEEFFFEVTRASFAQRRKTLWNNLASKFPALKPRKDDLVEGLNAIGIDLIRRGETL
                     DIPEFAKLSNFLGDFLKGK"
     gene            18976..19233
                     /locus_tag="U0308_001257"
     CDS             18976..19233
                     /locus_tag="U0308_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Veg family protein"
                     /protein_id="HEM2316226.1"
                     /translation="MPKTIASIKTNLDSRLGKALTLKANGGRKKTIERCGILAETYPS
                     VFIVELDQDENNFERVSYSYTDILTDAVELVFTDDNKELAL"
     gene            19372..20253
                     /locus_tag="U0308_001258"
     CDS             19372..20253
                     /locus_tag="U0308_001258"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEM2316227.1"
                     /translation="MKISITAPAKINLSLDALYKREDGYHEVEMVMTTIDLADRLYLE
                     RLDEDKIVLDVKAHFIPEDRRNLIYQAALLLKKRFDVKMGVRITIDKHIPVSAGLAGG
                     SSDAAAALKGLNVIWELGLSIEELAEISSEIGSDIAFCVYGGTALATGRGEKISALPN
                     IPGCWIVLAKPSISVSTPTIYKELQVDNVEHPDTQKMIESIKNGDLDGIFASTGNVLE
                     SVTLEKNPQVKRIKDRMLAFGAEAALMSGSGPTVFALIKQYSRAKRVYNGLRGFCEEV
                     YMVRPWSEGENDTNINN"
     gene            20275..21012
                     /gene="chbG"
                     /locus_tag="U0308_001259"
     CDS             20275..21012
                     /gene="chbG"
                     /locus_tag="U0308_001259"
                     /EC_number="3.5.1.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitin disaccharide deacetylase"
                     /protein_id="HEM2316228.1"
                     /translation="MKIIFNADDFGISPGAVYGILESYKRGVVKSTTLLANSPAFDLA
                     VEVAKENPGLDIGAHLTLTFGSPVLQGLETLTDDDGRFRRNYTSLENGLADVDMNEVE
                     RELTAQIEKILDAGITISHFDTHHSIEPLIYPVQHKLAEKYGVSIRRHSDVSDFGAIK
                     TPDLFATEFYADGVSFETIKKLVQKHIGTNDVVEVMTHPAFIDETLREISSYVEPRIK
                     EVSILTSRELQAYLGQQEVEIISFRDL"
     gene            21176..21994
                     /gene="purR"
                     /locus_tag="U0308_001260"
     CDS             21176..21994
                     /gene="purR"
                     /locus_tag="U0308_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pur operon repressor"
                     /protein_id="HEM2316229.1"
                     /translation="MKIRRSERLIDMTQFLLSHPRKLVPLTMFAERYGSAKSSISEDL
                     VIIKKTFEDRGIGTLETVPGAAGGVQYISIAGNDDVLDFVHTLCNRIAEPNRLLPGGY
                     LYLSDLLGEPVTLKAIGKILATKFNNQKIDAIMTVATKGIPIAQAVAEHLSVPFVIVR
                     RDSKVTEGSTVSINYVSGSSKRIEKMELSKRSLAEGSNVVIVDDFMKAGGTINGMKNL
                     LEEFNAHLVGIGVLVESEYAEERLVDDYVSLVKIKNVNMKEKQIEVVDGNYFNS"
     gene            22169..22846
                     /locus_tag="U0308_001261"
     CDS             22169..22846
                     /locus_tag="U0308_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEM2316230.1"
                     /translation="MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQ
                     GDMKINATGTGAISPVNTQVPDYDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTY
                     TGKVKEIAEQGQVQNGVSSFSVIISLDKTDDLKAGMTADASILVNEKKDALYVPIEAV
                     QKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETS
                     TVPGAPS"
     gene            22895..23587
                     /locus_tag="U0308_001262"
     CDS             22895..23587
                     /locus_tag="U0308_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316231.1"
                     /translation="MPKPLIDMKNLTKTYTLGGETFKALDDVTFTVEQGEFLSIVGPS
                     GSGKSTLMNMIGCLDVPDEGSYHLDDVDVFKLSDNKLSEIRNKKIGFIFQQFNLLPKL
                     SAFENVELPLIYAGLSVSAREKAAIECLEKVGLLEKRRNLPTQLSGGQQQRVAIARAL
                     AGKPQILLADEPTGALDSKTGKEVMGILQELNRAGNTIVMITHDPTIASYGTRSIRIQ
                     DGKLFHEEATQA"
     gene            23584..24792
                     /locus_tag="U0308_001263"
     CDS             23584..24792
                     /locus_tag="U0308_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2316232.1"
                     /translation="MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVASVILLVSLGNG
                     VTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNAT
                     FDYKNSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGD
                     PIGETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETK
                     SAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTL
                     TTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVI
                     SVCGGIIGIIIGVSGALIFGSVAGISSGITAGTIIFSFVFSLCIGVIFGIAPANKASK
                     LRPIDALRSE"
BASE COUNT         8419 a         4304 c         5279 g         7020 t
ORIGIN      
        1 tagcactcga ttttggggcg ttagtttaat tctagtagca ttaatatggt atattttgtc
       61 gaaataatga ctaatgagaa tcataaaaag gtaaatcgtt aatttaaact ttaacagtta
      121 gcgctattaa gtacttttac tcagaaaacc tctaccatct tcttgttatt tcagctataa
      181 tgaagtaatt gaaaactaaa ttaaaggatt aacaaggagg aaaacgattt gaacattatg
      241 attgcgctga ttcctgcatt actctgggga acagtaccgc taattattac aaaatttggc
      301 ggttcaacaa gacaacaaac gatgggaatg acactagggg cactcacttt tgcggtaatc
      361 gttttcttct ttactgaccc agtttatacg cttaaaacag taggaattag ttttataaca
      421 gggtgtttat ggactgtggg tcaaatgttc caactgcaag cattcaaaat tatcggtgtt
      481 tcaaaagcaa tgccgatttc tacagggatg caattagtcg gaacaacact ttgtggggta
      541 atcttatttc atgaatggga tacgacactt cggattattt taggttttat tgcacttgca
      601 ctaattgttg gcgggatttt cttaacatcc tatgctgaaa aagaagaaga tggaactaac
      661 gcattaaaac aaggtttaat cacattattc atatctgctt gtggttatgt tggcttagtc
      721 gttctaattc aaggtttcaa aatcgatgga attaacgcaa tcttgccgca agcgattggg
      781 atggttttaa gtgcgctaat tatgacgcat agcggtggta cggaaaaacg tttcaataaa
      841 cgaacactct tacttactat tccagggata atctgggcgg ctgggaacgt tgcgatggtt
      901 cacgctaacc aacttgttgg cgttgcgact ggtttttcac tttcgcaact cggagttgtt
      961 atctcaacta ttggcggaat cgtactttta aaagaaaaga aaacacaaaa agaaatgttt
     1021 tttgttattg tgggcgtagt tttagtcgtt ctcggcggga ttttaatcgg cgttgcaaaa
     1081 ggtgcttaat taattatttc gtttagcgcg aaaaatgata taatgatact aattgtttta
     1141 tttttaagga gggaattgtg ttgcctgaag agaaaaatac gttttatatt accacaccaa
     1201 tctattatcc aagcggaaaa gcgcatatcg gccatgctta tacgactgtt gcgggggacg
     1261 cgatggctcg ttataaacgc ttaaaaggat atgatgtgtt ttacttaact ggaacagatg
     1321 agcacggtca aaaaatccaa gcaaaagcga aagaacgcgg aatttctgaa caagaatacg
     1381 tggatgaaat cgcagaaggt ttccaagaac tttggaaaaa actagaaatt tctaatacgg
     1441 attttattcg tacaacacaa gaccgtcata aaacatcggt tgaaaaaatc tttgaacaac
     1501 ttttagaaca aggcgacatt tacttaggtg aatacgaagg ttggtactct gtttctgatg
     1561 aagaatactt tacagaaaca cagttagaag aagtatataa agatgaaaat ggtaaagtaa
     1621 tcggcggaaa agccccaagt ggcaatgaag tcgaactagt gaaagaagaa tcctacttct
     1681 tccgtatgag caaatatgcg gaccgtttag tagaatatta taattcccat ccagaattta
     1741 tccttcctga atctagaaaa aatgaaatga ttaataattt catcaaacct ggtttggaag
     1801 atttagctgt atctagaaca acttttgatt ggggtattaa agttcctggc aatccaaaac
     1861 acgttgttta tgtatggatt gacgcgcttt ctaactatat tactgcgctt gggtataata
     1921 cggacaatga cacgaaattc caaaaatact ggcctgctga tgtacaaatc gttgggaaag
     1981 aaatcgttcg tttccacacg atttattggc caattatgct gatggcacta gacttaccac
     2041 ttccaaaaat ggtgttcggc cacggctgga ttctaatgaa agatggtaaa atgtctaaat
     2101 ccaaagggaa tgtagtagat ccttatatgc tgattgaccg ctacggccta gatgcgcttc
     2161 gttattactt attacgcgaa gttccatttg gttcagatgg tttatttaca ccggaagact
     2221 ttgttgatcg tgtgaacttt gatcttgcca acgatttagg aaacttactt aatcgtacag
     2281 tagcaatgat taataagtac tttgatggcg aaattccggc ttatcaaggc aatgtaacag
     2341 aattcgatca aaccttagtg gatttcaaaa acaatgtggt gaaggaatat gaaggtagca
     2401 tggatcacat gcaattctct gtagctttaa accaactgtg gtcactaatt tctcgtacaa
     2461 ataaatatat cgatgaaacc gctccatgga cacttgccaa agacgaagat aaacgcacag
     2521 aacttgcgag cgtaatgact catttagcag aaaacttacg tattatcgca gtgcttttgc
     2581 aaccattctt aacaagaact ccaggcgaaa tcttcttaca actaggttta caagaagaaa
     2641 acttgaaaaa atgggatagc atctatggat acggtgaaat tccagctggc acaacagtgg
     2701 tgaaaaaagg tacgccaatt ttcccaagac ttgaggcaga agtagaagtt acttatatcc
     2761 aagatgaaat gaaaggctct gcgccagctc ctgccaaaga agcggcggaa gttgaagcgc
     2821 ttgaaacacc gcaaatcggc attgaagatt tcgataaaat cgatcttcgt gttgcagaag
     2881 taaaacaagt agataaagtg aaaaaagcag ataaacttct ttgtttccaa ttagacttag
     2941 gggaaggaaa actgcgccaa gtgctttcag gcattgcaga attctatcaa ccagaagaac
     3001 taatcggcaa aaaagttatc gtcgtttcta acttaaaacc tgtaaaactt cgcggactaa
     3061 tgagtgaagg aatgatactc tcaggcgaaa aagatggtaa gctaagtgta atcgaagcaa
     3121 gtagcgcact tccaaatggt gcaaaagtaa aatagtaaaa acgagtccta attcatttga
     3181 gttagggctc ctttttttcg cctaaaaaaa cttttaaaaa aagattgcat attgcaaacg
     3241 attacaatat aatgtaacta tacttactta attcattgaa cgaagtaagt ggtcggacag
     3301 aagtaaagga gcttgaaaat ggatatctta agaaaaggga ataaagactt aattaaagac
     3361 ataaaccgct acaccgtgct gaatttaatc cgtgaaaaag gagaaatcac gcggactgag
     3421 atagccaaaa aatgcgattt tgggatgtct acattaacgt atattttaga tgatttacag
     3481 caagaaggca ttattttgga aggtgccgaa acatcatcta ctggaggcag acgtgccaag
     3541 ttagttagat ttaataaaga ttatggattt gttgttagtg tcaaagttga agaggaacaa
     3601 cttctttttg cgttgaccga tttaaatgca gaaatcatgg aaaatacttc tataccattt
     3661 tcctcagaga aaaaaccaga agaagcgatt gagttaattg ctaaaaatgt gaaaaagatg
     3721 tgtgaaaaca gagatatgaa ccatttgcta ggagttggaa ttgcgatttc cggcctagtt
     3781 aatcgtagaa aaggaacagt tatccgctct actatgttag ggtgggaaaa tgtcgcttta
     3841 gaagcaatgc tacatgctta cttcccagat attccagtgt acgtagataa aaatataaac
     3901 tgctacacac tcgcggaact atggttaggt gaaggaaaac aatcaaataa ttttgcaaca
     3961 gtttccgttg gagctggact tggtttatcc gttgttatta atcgtcaaat ttattatggt
     4021 gcacagggtg gagccggtga atttggacat acaacgattc aaccgggcgg atacaaatgt
     4081 cactgtggtc aaaaaggatg cttagaaatg tacgcatccg aattttattt ccgaaatcgt
     4141 ggcgaagaat taaaagaagc ttatccaaca tcagaattaa aggattttca ttttgataaa
     4201 gtagcaaaaa gtgctcgagc tggagacgaa atggcgacgg aacttatggg taaaatgggt
     4261 gaatatttag gatacgggat tcgaaatatc attaatacct tcaatccaga aaaagttatc
     4321 attgtcggtg aaggtttgca ccatagagac ttattcttaa ctaaaattga tgaaattgct
     4381 tcacaaaact ttttttcagg ggctggcttt gaaacggaaa ttactacaac ttctttagag
     4441 gatcctgcat ggttacaagg tgcggcttta ctagtcattc accaattatt ccaagtgcca
     4501 atctatgaag aagaacaaac gttactacgt taaaaagaac ataaactatt tcaggaggtt
     4561 atttttacat ggttggtatg actagaaaga aaacactctt ttggctatgc atattcttgc
     4621 tacccaattt actaggtttt ctcattttta ttgcaatccc aatccttggc tcgcttggta
     4681 ttagttttac cgattgggac ttagtgagta ctattcactt tactggattt gaaaattaca
     4741 aaaggctatt taatgaccca gagttttgga aatcgtttag aaatacaatc acgttcatca
     4801 tcggttattt gcctagtgta atgattcttg gcctagcgtg tgccttgatg ttgaaccaaa
     4861 aaatcaaact aagaccattt ttccgagcag tgtacttctt acccgtaatc acttcatggg
     4921 tagctgtttc actcgtttgg aaatggctgt tcaatccttc atacggtttg atcaattact
     4981 tcttatcttt aattggtatt gcagggccca actggttaac agatccacaa acggcgatga
     5041 ttgcagttat tattactagt gcgtggaaag atattggttt cgttatggta ctattccttg
     5101 gtggattgca aaatatttca ccatcgtatt acgaagctgc caatatggac ggagcatcaa
     5161 aacttcgcca attattctct attactatcc cgcttcttac tcctactaca ttctttgtga
     5221 cgataatttc gcttatcaac tcattccagg tgtttgacca agtgatgatt atgacagaag
     5281 gtggtccaag tggagcgaca atgaccctag tccaaaatat ttacaaccat gcatttagat
     5341 acttcgaaat gggctatgct tccgcgatga gttggatatt gtttattgtt attttcatca
     5401 ttacaattat tcaaaataaa cttcaaaaaa ggtggtccaa ttactaatga aaacagaaaa
     5461 aagtggttca ccaaaatggc aactatttaa aaatattctt acctatacaa tcatctgtct
     5521 tggtggaatt atcatgctta tgccgtttgt ttggatggta tcaactgcat tcaaaacagg
     5581 cgcagcgaac atggtattac cgccgcaatt tattcctaaa gaaccgacaa ctgcgaactt
     5641 cactcaagta tttgaaatgt tcccaatgtt gcgattttta gttaactccg tggtcgttgc
     5701 agttgtaacg acacttggtc aaatgctgtt ttgttcaatg gcagcgtatg cttttgccag
     5761 aattcctttc tggggtcgcg ataaattatt tttactttac ttagcaacaa tgatggtgcc
     5821 agctcaagtt acaatgattc cgcagtttat cttgatgaaa caatttggct ggttggattc
     5881 gtatgctggt ttgattgtac ccgcactatt cagcgttttt gggacattct tattacgtca
     5941 agcattcatg ggaattccga aagagctaga agaagctgca ttcatggacg gtgccaatca
     6001 ttttactatt ttccgaaaag ttatcttacc acttgcaaaa cctacttttg cgacactcgg
     6061 aattttaact tttatgcaat cttggaacag ttatttatgg ccattaatcg tgacaagttc
     6121 acaagaaatg gcaactttac ctttaggatt atctctttta caaggtagat atggaacgaa
     6181 ttatggctta atgatggcgg gtgtactaat tagtgttatc ccgattctag cagtgtacct
     6241 ttttgctcaa aaatatttca tccaaggaat ggcaatgagc ggaatgaaag aataaaaaac
     6301 caacaaaaaa ggagtgttac aaatgaaaaa aggtttatta ttgttaatgg tagttgtact
     6361 gtctgtattt ggtctttcgg cttgcggcgg tggcagtagt agtggcgata aaacagaaat
     6421 aacgtattat caattctctg caccagctga tggaaaagca cttgatgaaa tggtaaaaga
     6481 atttgaaaag caaaacccgg atattaaagt aaacgttcaa acaatcgcat ttaacgacta
     6541 tttcactaaa ctacaaacac aaatcgcagg tggagatgct ccggatgcct ttgaacttaa
     6601 ctacgaaaca ttcatgcaat atgctgaaaa aggtgtactt gcagatttaa caagctatat
     6661 cgaaaaagat aaagattttg atccatctac acttaacaaa caagcctacg atgctttcaa
     6721 atatgatggc aaacaatacg gtatggtaga aagtttctcc aacgttgtaa caatttacaa
     6781 taaagacctt tttgataaag ccggcgttga atatccgaca gctgactgga cttggaaaga
     6841 cgaagaagcg gcagcaaaaa aattaacaga tgctaaaaat aaagtttggg gaacttccca
     6901 accagtaaca atgaacgaat tctacaaagt agcagcgcaa aatggtggtt cgattttcaa
     6961 cgaagactta acgaaaacaa ctatcaacag tcctgaaaat gtggcagcat taactcactt
     7021 aacaaatgaa gtaacagatt caaaagtggc gccttcacca gctgatttat ctggccaatt
     7081 accagaagat ttatttatga atggtcaaat cgcaatgctt cacaccggta tttggttgtt
     7141 cgatatgttc caagatgctc cgttcaaatg ggatgtacaa gtagaagcag gaaacacgca
     7201 aaaagcaact cacttcttcg caaacggcat tggtgtttct aaagactccg ataaaaaaga
     7261 agcagctttc aaattcgctt ccttcatgag cgcgaacgaa gaagcagcga aaatcagaat
     7321 tgataataac tgggaacttc cagcgactga aaacaaagag attttacaac catatttaga
     7381 tgcaactcct ccagataaca gagaagcagt attcgaatct ctacaatata tggtattacc
     7441 tccagttgta aaagattgga acaaaatcag tgattataca aactctgaat tcgaaaaagt
     7501 attaaatggc gattctactc cagaaaaagc actgaaaaac agcgaagaca acatcaacaa
     7561 aacaatggga tttaaataag taaaacgagt ggcagggacg tttgtaagta tctttacaaa
     7621 ttagactgcc actttagtat atccaagaaa ggaaatagaa catgtctaaa ttcacaaaat
     7681 taatgcaggg ttacttgcat ttaatagaag gaaaaaacga aaaaatcaaa ccaatcctgc
     7741 tggaaacaaa acctaacttt acaactgatt cagtccttga aaccgcttct tggctatggc
     7801 ttagcagtaa aatcaatcat tatgatagag aagaagtaga gccagtaatt gcatttttag
     7861 ttgaaaactg gaatcgtcct gaaaagtcta tttggggttc agctgaaaat gatatttatt
     7921 tagcaactat ttcaagtgta tactctgcat tattagatgt gaaaaacact tttccaaaac
     7981 cggagttaca acaaacgatt acaattatcc gcgactattg ttttgataat ttattaaaag
     8041 gcgatagcat tcttactggt tttaacacgc ggaaagtgtc aaccgaccag cttttatccg
     8101 tgcttccgtt tggtctattt tcgcctgaag atcttgtaat ggtggcggct gttggcaaaa
     8161 tggaacaaca attagtgcaa gatgatgggg tattgcctta ttcaggagca ccaagagtta
     8221 attcctttgc aacggctcta atggcgctat atttcttaga aaaaagtgac caagataaag
     8281 ctttacacta tttgaatatg gcaatgaaga tggaagataa tgacgaactt ggcgcgattt
     8341 ttattgaaat taaccaagca ttccgggcga tggaaagtga agtgacagcg catatttcac
     8401 acgatccttt tgggcatgaa aatcgctatg agcaacagtt aactgaacgc acgccacatt
     8461 atcccgaaac agaaatgcat ttttcggctg cgtgtgaagt tatttctgaa gtcgaaccaa
     8521 tccaagtcga actcgtctta aaagagaaag actggaccat tctatgtgag aagaaagaaa
     8581 aaaatgatgt ccaaatctgg gaagcgctcg ttccaccgtt agaagaagtt ggcgagtata
     8641 cgtattattt ccgggcaaca atgaaagacc aaaccacttt gacatcagat gattatacag
     8701 tcgaaccaat ttggaaacac tggtcagagg aagcggcagt ttgtgaaaca gagcaaggct
     8761 taatggtttt atttaaagaa aatccatcaa gtatcatccc ggtcgagttc gccgcgaaat
     8821 cagatgaact tgtaatcgga ttaaaacctt catttgaagc gagcaatgtt aaaacaaaat
     8881 catccggcca attgaaaaaa gatgatttag agattatcgt ttcaaacaat ccagtgcgtc
     8941 tcgaagtaca ttttaaaggc aacttaattc tagaatcgca taaaatttac ccagcgttac
     9001 agtggtatac agataaggct ggcgcaatca acaaagtgaa actgcattta gatgccccga
     9061 aagaagaaga gtattacggc ttcggtgaac gatacaatgc attaggtcag cgcgggaatg
     9121 tgcttgattg ttttgtttat aatcaatacc gtgatcaagg aacaagaacc tacatcccga
     9181 tgccgtttta tcatacgaat cgtgattata gtgtgttcgt tgataccgct cgttacacaa
     9241 gttttgattt aggtaaccaa ctagcggaca agcatacaat tacagtagaa ataaatggct
     9301 gtgacacaga tatttgtctt ttaatgggag atattcgtag tgcagtagca aattatatga
     9361 agaaaactgg gaaaccggcg atggtgccag tttgggcgct tgggccgtgg atgtctagta
     9421 acaactggga ccgtgaatct gtcgttcgaa cagaagtgga aacaacgcaa gaattgcaaa
     9481 tcccatcaac cgttgtcgtg ttagaacaat ggagcgatga agcgacttat tatatgttca
     9541 atgacgccga atatgacgaa aaagccccat ctgaagcata taattacgat gaaattagat
     9601 tcccttcatg gggtagatgg ccagatccaa aagggatggt tgactatatc catgacaaca
     9661 aaatgaagtt aattctttgg caaattccga ttcaaaaata cttaaatcgc caacaacacc
     9721 cactaaaaga ccgcgaagaa gcctatatga ttgaaaaagg ctatgtggtg aaaaatccgg
     9781 atggctcgcc ataccgtatt ccagaaaatt ggttcacaga aagcttgatt atggatttct
     9841 ccaatgaaga aggaaaaaaa tggtggtttg acaaacgaca atacttgatt gatattgggg
     9901 tcgatggctt taaaacagac ggcggcgaat tcgtctttgg tgaaggtttg caatttgctg
     9961 atggtagacg tggtgatgaa atgcgtaatc tttatccaaa tgactatgtg gaagcttact
    10021 accaatttgc acaacaaaat gatggcatga catttagtcg tgctggctac actggcgcgc
    10081 aaaacttccc ggcgcactgg gctggagacg aacgttccac ttttgatgca tttagaagat
    10141 cgctcattgc tggactttcc gctggatttt cgggaattcc gttttggagt tttgactttg
    10201 caggttttaa cggcgatatt ccgacggctg agctattcat tcgttctgct gaaatggcta
    10261 ctttctgccc gattatgcag tatcatgctg aaagtaaagc ggaatttaat caagaccgga
    10321 caccgtggaa cattgcttca cggactggtg acgactcggt catccctatt taccgccatt
    10381 ttgcgaatgt tagaatgaat attttacctt atatttataa tgaatcatta aaatgtgttg
    10441 aaactggctt gccaatgatg cgtgcgcttc tgctggacta taaagaagat ccgcgtgttt
    10501 ctgatatgta tgaccaatac ttattcggag aagcaatgct gatcgcacca gtaattgaag
    10561 acggcgtgcg ctccagagaa gtttatctgc cagaaggaac ttggtatgat ttctggaatg
    10621 gaacaaaagt gaacggacca actttacgaa aatgcaaagc ggataaagaa gaaattccag
    10681 ttttcattcg tggtggaaaa gcagtgctat gtaatgtgga cgctacattg aaactcggct
    10741 catgggttgg caacacagtg gaagaatacg atacaccact acttaaaatt tatgtggacg
    10801 gtgatttcac agaagaaatg acggatcact tatccgaaaa atggctagta aaagtaacgg
    10861 aaaatgcgga cgaagtagtt gtttctgttc aaacaaacac accggcatat gaagttgaag
    10921 taatcggcac gaccaaaaaa gtacaaataa agaaagggag ataatgatgg atgcttccac
    10981 aagttttgcg attctaccat ctaatgtaaa acaaaaaaca gctttcgaaa gaaaagtaaa
    11041 tcaagtgaaa acggctagtt gggcgaataa ttgcctgact ggcacacttg atatcggtca
    11101 gttcagttgc tattttgtta atgaaaaaat tgctcgcgtg acggtgaacc catttggaga
    11161 agtggattta acgccttcga ttgctgcgat tcacgatacg gaaaaacaag cggctaaatt
    11221 tacagaaaca acggacggct atgagcttca ttttgcggat aaagagatta ttatttgtaa
    11281 aaatcctttc caaattatta tgaaacaagc tgggaagcgt attttccaaa cagaaggatt
    11341 ggcaattaat cgctataaag aacaccaaat ttcgattcaa agcgaaccag gaaccgcgat
    11401 ttttggttta ggtgaaaaaa cgggtgcctt gaataaagcc ggttccatta ttagtatgtg
    11461 gaacacggat gtatacagtc cacataataa agatacagtg gagttatacc agtccattcc
    11521 tttcatgatt gcggatactg cggaaacaac ctatggctta ttttatgata attcgcatcg
    11581 tacagaattt gatttccaaa gttttgaaga aatgtatacg attttagcag aaggtggaca
    11641 agcgaattta tatgttattt ttggtgagga cacgaaagaa gttgtcgcga attacactga
    11701 tttaactggt aaaacaccac ttccaccaaa atggtcatta ggttatcatc aatcaaggta
    11761 tagctacacc tcggaagaag aagtggaacg gattgcgaat acttttaaag aaaaaaagat
    11821 tccgcttgac tgtgtattca tggatataca ttacatggat gatttccgcg tattcacttt
    11881 taacccggat acttttccaa atggaccaga attgattgcg cgtcttcggg aacaaaatat
    11941 tgacgttgta ccaattgtcg atccgggaat taaaaaagat gttgattatt ctgtttatca
    12001 agaggggatc aaacataatt atttctgcac taaattagaa ggttcgattt attatgggga
    12061 tgtttggccg ggtgtcagtg ctttccctga ttttctaagt acaactgttc aacattggtg
    12121 gggcggttta cacaaatttt acacagattt aggtatacgc gggatttgga atgatatgaa
    12181 tgagccgtct gtattcaatg aaagtaaaac gatggattta gatgttgtgc ataatctgga
    12241 cgggaaaaat gtaacccata aagaagcgca taatttatat ggattgtata tgagtaaagc
    12301 tacttttgaa gggttaaaac ggcttgtgcc aaatgaacgt ccattttcac tcactcgtgc
    12361 tggttatgcg ggtgttcagc gttattcggc ggtttggaca ggagataatc gtagtcactg
    12421 ggagcatttg gagatgtcgc tgccgatgat tatgaattta ggattatcgg gcgttgcgtt
    12481 taccggtgct gatgttggtg gattttcttc agattgtacg aaagaaatgt tgattcgttg
    12541 gacgcaagct ggggcttttt taccatattt cagaaatcac tgtgtacaag atagtattta
    12601 tcaagagcca tgggcgtttg gcgcggatgc agagaaaatt gtgaaacaat atattgaatt
    12661 gcgctatgcc tttttaccgt atatttatac agaattccaa aaaacggcag agagtggttt
    12721 accgctcgtt cggccgcttt atatggagtt taaagatgaa cgcgatttaa ttcaagtgaa
    12781 tgatcaattt atgctaggtg aaaatatcct cgttgcgcca atcgttcgtg aaggccaagt
    12841 gaagcgtcta gttcgtttgc caagagggct ttggtttaat tattggacaa aagagcagtt
    12901 cgtgggcggc gactatatta tcgcagacgc gccgattgat accatgccaa tttacattaa
    12961 agcggggaca attctgccag ttggtagcag cgttcaaaat acaaaagaga cgcaagattt
    13021 gacattagaa gtttacttag atggcgacgt agcaagcggt tatgtgtata atgatgatgg
    13081 taaaagttac cattatgaaa gcggcgcagc atccaaaaca acactcacag ctactttcaa
    13141 aaatggcgaa gtactaataa atgctaccca tcaaggtgaa gcaaacttac aacataaagt
    13201 aactactata caagtttttg gagaaaaaac agacaaaatt acaagggcgg gaatttaatc
    13261 tatgaaagaa aaagattggt ggaaaaaaag cgtagtgtac caaatctatc caaagagttt
    13321 taatgattca aatggtgatg gagttggtga tattcaagga attatcgaga aattagatta
    13381 tttaaaagag ctaggtgtgg acgttatctg gttgtcccca gtatacgatt cgcctcaaga
    13441 tgacaatggt tacgatattc gcgattatca aaaaatttac gaagagtatg gagatatggc
    13501 gacttttgat caattacttc aaggtttaca cgaccgcgaa atgaaacttg taatggatct
    13561 tgttgttaac catacttctg atgaacacaa gtggtttgag gaatccagaa aatccaaaga
    13621 caacccgtac agagattact atttctggcg cgaggaaaac gaaatcaata actggggctc
    13681 gattttcagc ggtccagcat gggaattgga cgaaaaaaca ggtgagtact atttacacct
    13741 gttctccaaa aaacagcctg atttaaactg ggaaaaccct aaattacgcc aagatgtata
    13801 taatatgatg aaattctggc tagataaagg cattgatggc ttccgcatgg atgtaattaa
    13861 ttttatttcc aaaaatactg atttcccaga tggtccagta ccagatggtc aaatttatgg
    13921 cgatgctggc aatgattttt gtaatggacc gcggattcat gagttcttgc aagaaatgaa
    13981 ccaagaagtt acttctaaat acgatgtgat gactgttggc gaaatgcctg gtgctagtac
    14041 aaccgacgcg caaatttaca cgaatccagc aaataatgaa gttgatatga tttttacatt
    14101 tgaacatatg aacttagatt ccgatggcga caataaatgg gatctaaaac caatctactt
    14161 accagattta aaagaaaata tgtctgaatg gcaagtggcg cttcaagaaa acggttggaa
    14221 tagcttatat tggaataatc atgaccaacc gcgtatcgtt tctcgttttg ggaatgacaa
    14281 tcgtttccgc gttcgttcag cgaaaatgct tgcaacttgt ttgcatatga tgaaaggaac
    14341 gccatatatt tatcaaggtg aagaaattgg gatgacgaat gttcattttg aaacgctaga
    14401 tgattaccgt gatatcgaaa cgctaaacat gtacaaagag cgtaaggagc aaggacacag
    14461 ccatgaaagc atcatgcagt cgatttacac aaaaggccgt gacaatgcga gaacgccgta
    14521 ccagtgggat aatagcgaga atgctggctt cacaaccgga acgccttggc ttaaagtcaa
    14581 cccgcgctat acagaaatca acaacgaaga agcgctgaaa aacccagatt ccattttcta
    14641 ctactaccaa aatcttatta agttacgaaa aacgactgaa atcatcacaa ctggtaatta
    14701 tcgtttgtta ttacctaaag atgaagcgat tttcgcatat gaacgctaca cagaaaatga
    14761 aaaattagtg gttttatgta atttcacaga agaagaacaa gttatttctg atgaaaacat
    14821 tttgaacgaa atccaaaaag gttccgtgct tgtaaacaat gttcctaata ttatagaagg
    14881 aactttacga ccttacgaag caatcgttta tcaaatcaag taaatctcag gaaagccacc
    14941 aattgttagg tggctttttt tgtatgcgtc aaaaattata gtataataga aggaaatgat
    15001 tttattagga ggaattctct tgctatttga tacgcatgta cacctcaatg acgaggcttt
    15061 tgatgatgat atagaagaag taataaaacg cgcacaggaa aacgatgtga ctcgcatggc
    15121 cgtggtgggc tttaataaag aaacaattga ccgagcgctt gaattagccg agaaatatga
    15181 ttttatctca ttaatcgtcg gctggcatcc cacagacgct attaccttca cagatgaaga
    15241 tttagaatgg ctccgcgatt tagcacttac acacccgaaa gtagttgctt taggcgaaat
    15301 gggcttagat tatcactggg atacttcgcc aaaagaaacg caatttgagg tttttagaaa
    15361 acaaatccgt ttagcgaaag aagtgaattt accgatagtt attcacaacc gcgaagcaac
    15421 agaagatgtt gttcgtattt tgcaagaaga gcacgctgaa gaagtaggtg gaattatgca
    15481 ttgctttggt gaaactgtcg aagtaatgga agcatgtcta gcgatgaatt tttacatttc
    15541 attcggagga acagtcactt ttaaaaacgc aaaattacca aaaattgcag ctcaagctat
    15601 accaattgac cgtttattaa ttgaaactga cgcgccgtat ctcgctccaa ccccaaatcg
    15661 cggaaaaaga aatgaacccg gatacgtcaa gttagttgcc gaaaaaattg cagaactgaa
    15721 agaaatgaaa tatagtgaaa tcgctacgca ctcaacagaa aacgcaaaaa aactatttaa
    15781 aataaaagat tgattgtaac acaattgtaa tataagggcc agtctgtaac ccaatcttaa
    15841 gcttcacgga gataaaaatg atgactggga caaaaaccct tattttatgc ctacgaccag
    15901 agatgtagaa aaatgacaca tttctgttac atttgacact ttaaaagaat aatattttta
    15961 aaaacggctc tatatcaacg ttttttgtta aagtttgcga aggtgtgaac aatctgtata
    16021 aaaaattgac agttcttccc tcccctgtat ataatcacta gcgaagtaga aaggggagaa
    16081 atacatgacc atggaaaaca gcagtaacgt agcccaatca tcaaaatgga aattaccaat
    16141 catgattgca ggatttgtta ttgtagtagc attggttttt tatttcgttt tcgaaggaac
    16201 taaaaacgat atcactatag taaatgctgg tgaaaaaatt gaatcaagaa cacatgcgaa
    16261 aactgtttca gaagcattag acgaagcagg tattaaagta agtgaacgcg atgaaattgc
    16321 gccaggcaaa aatgcagaaa tcaaagacgg catggaaatt aaatatttgc cagctcgtca
    16381 aattacaata aatgataatg gtactaaaaa agacgtttgg agcacaaaag caaacgtagc
    16441 agacttgctt aaagatgaaa atattacaac tcgtccgcaa gatgtattaa acgtagcatt
    16501 agatactaaa ttgaaaaatg gccttgaagt taacattaat cgtgccattc aactttcctt
    16561 acaaaacgga gcaaaaaaag atacagtatg gacaacaaaa acaaaagtta gtgatttact
    16621 agctgagaaa aatattaaac ttgatcaaga tgaccgtgtg tcacctgcaa aagacagtaa
    16681 cttaaaagaa aaaatgactg tagaagttac atatgtcaat tcaaaagcag aaaagaaaaa
    16741 tgaacaagtt aaattcgaaa cagtatataa agaagatgat agcctaaaca aaggcgttga
    16801 aaaagtcgtt caagaaggta aaaacggcga aaaagttgtt gagtataaag taacatttga
    16861 aaatggcaaa gagaaaaaac gtgatgtcat taaagaaaat gtcacttcta aaaaaactga
    16921 taaagtagtt gtacgtggca cgaaagaaaa agtggtagca acaccagttt ctaacgtatc
    16981 tactccaagt acaacgtcat catcatcatc aactccatca ggtggtaaaa catacagaat
    17041 ggaatctact gcatattcag gtggcggtac tacagcttat ggtatcaacc taagtgccaa
    17101 ccctggacta aaagtaattg cggttgatcc acgaattatt ccacttggct ctaaagtttg
    17161 ggttgaggga tacggagaag caatcgctgg agatactggc ggcgctatca aaggaaatat
    17221 cgttgacgtg tatttcccaa atgaaagtca gtgctattca tgggggagaa gaatggtgac
    17281 tgtcaaagtg ttaaactaaa ttcgtataaa aacgaggctg actcataggg cctcgttttt
    17341 tctttgtcca aaatgtggta tgatatattt acttatttta taaaaaagga tgtagtaatt
    17401 atgaacggga agcctgtaat acatgaattt atagtcgtag aaggacggga cgatacaacg
    17461 gcaattaatc gttcagttat tgctgatacc attgagacta atggatctgc cctttcacaa
    17521 gaaacaatag aaaagattag acatgcacaa gaacttcgcg gcgttattat ttttacagat
    17581 ccagattttc ccggtgaaaa aatccgaaaa caaattgact cagcggtacc tggctgtaaa
    17641 cacgctttta tcaatcgcca agacgctttg ccaaaagcag gtcgtggcct tggagtggaa
    17701 catgccagta gcgctaatat tcgggaagca ctcgaaaact tccatacaag tgggacgcct
    17761 gcagaaaaac aatttatctc caaagatatt cttattcatc tcggtcttct tggaggagcg
    17821 ggagcgaaag aacgccgaga aaaaatcggt aatatactaa aaattggcta tacaaacgga
    17881 aaacaactgc aaaccagact agaatcattt gcaatcagtg aagaccagtt agtagccgcg
    17941 tgccaaaaga ttatgcagga ggaagaaaat gagtaaagat attgcaactc ccggaagaac
    18001 gacagaaatc ctaaagaagt atggtttctt atttaaaaaa agtctgggtc aaaacttttt
    18061 aatcgacagt aacattttga cacggattac agatacagcc gaaataacaa aagaaacaaa
    18121 tgtcatcgaa atcggaccag gtatcggcgc gctaacagaa caattagcaa aaacggcgaa
    18181 cgaagtagtt gcttttgaaa ttgatcaacg tttactgcca attcttgacg atacgctaag
    18241 tgcatacaat aatatccaag tggtccacgg agacgtgcta aaagcagatg tggaggaagt
    18301 tatcgcagag caattcgcga agccggatct accactgaaa atcgtagcca accttccgta
    18361 ttacgtaact acaccgatta ttttaaaatt actccatgac aatattccgg cagattcgat
    18421 gacgtttatg ctccaaaagg aagttgcgga ccggataagc gcagttccaa gcacgaaaag
    18481 ctacggaagc ctaacaatcg ctatccaatt ttacatggaa gcagaactag cctttatcgt
    18541 gccaaaaact gtcttcatgc cgcaaccgaa tgttgattcc gcagtaattc atctgaagcg
    18601 tcgcaaagaa ccattagctg aagtaaacga cgaagaattt ttctttgaag taacaagagc
    18661 ttcgtttgct cagagaagaa aaacgctttg gaataattta gcttcaaaat tcccggcttt
    18721 aaaaccacgc aaagacgatt tggtagaagg tctaaatgct attgggatag acttaatccg
    18781 tcgcggagaa acgttggata ttccggaatt tgctaaatta agcaactttt taggtgattt
    18841 tttaaaggga aaataatttt tttcaaaaaa agcgctttct tagttgacag ttagcccttc
    18901 caactgttaa aatatttggt tattgatttc ggagccgaac tatgctataa tggatattag
    18961 tgaggtggaa aataaatgcc aaaaaccatt gcaagcatta agacgaattt agattctaga
    19021 ttaggtaaag cattgacatt gaaagcaaac ggtggtcgta agaaaacgat tgaacgttgc
    19081 ggtatcctag ctgaaacata tccatccgtt ttcattgtgg agcttgatca agatgaaaac
    19141 aactttgaaa gagtatccta tagttacacg gatatcttaa cagacgcagt agaacttgta
    19201 tttacagatg ataataaaga attagcttta taataaagct gaagtagccg aaccatatag
    19261 cgtggttcgg tttttgctat acatagaagt tgttttgggc cgctagctac atattttttc
    19321 tttcatatga tagaatagaa aaagagattt tgaacgcgga ggccaagaaa aatgaaaata
    19381 agcattacag caccagctaa aattaatctt tcacttgatg cgctgtacaa acgtgaggac
    19441 ggctatcatg aagtggaaat ggtgatgaca acaatcgacc ttgctgatag attatactta
    19501 gaacgcttag acgaagacaa aattgtgctg gatgtaaaag cacactttat tccagaagat
    19561 cgtcgcaatt taatttatca agcagccctc cttttaaaga agcgttttga cgtaaagatg
    19621 ggtgtgcgca ttacaattga taagcacatt cctgtttctg cgggtcttgc tggtggtagt
    19681 tcagatgcag ctgcagcgct caaaggatta aatgtcattt gggaacttgg tctttcaata
    19741 gaagaattag ccgaaattag ttcggaaatt ggttctgata tcgctttttg cgtatacggc
    19801 ggaacagcgc tagcaactgg gcgcggggaa aagatttctg cgttacctaa tattcctggt
    19861 tgttggattg tgcttgctaa accgagcatt agcgtgtcta ccccgactat ctataaagaa
    19921 cttcaagtag ataacgtaga acacccagac acacaaaaaa tgattgaatc cattaaaaat
    19981 ggcgatttag acgggatatt tgcgtctaca ggaaatgtat tagagtctgt gacattagaa
    20041 aaaaatccgc aagttaaacg aataaaagat cggatgttag cgtttggtgc tgaggcggcc
    20101 ctaatgagtg gtagcggtcc gacagtgttt gcgcttatca aacagtactc cagagcaaaa
    20161 cgtgtctata acggcttgcg tggcttttgt gaggaagttt atatggttag accatggagt
    20221 gaaggcgaga acgatacaaa tataaataat taatgaatga gaggggtcaa agaaatgaaa
    20281 attattttta atgcagatga ttttggaatt agcccgggag cagtttatgg tattttagag
    20341 tcttataagc gaggcgttgt gaaatctacc acgcttcttg ctaatagccc ggcatttgat
    20401 ttggcagttg aagttgcgaa agaaaaccca ggtctcgata ttggtgcgca tttgaccctg
    20461 acgttcggtt ctccagtcct tcaaggttta gaaacgctaa cggatgatga tgggcgtttc
    20521 cgcagaaatt atacctcact tgaaaacggc ttagctgatg tagatatgaa tgaggtggag
    20581 cgcgagttaa ctgcacaaat cgagaaaatt ttagatgcag gaatcactat ttctcatttt
    20641 gatacacatc attcaattga gccgctaatt tatcccgtac aacataaact tgcggaaaaa
    20701 tacggtgtga gcattcgacg tcattctgat gtttcggact tcggtgctat aaaaactcct
    20761 gacttattcg ctacggagtt ttatgcagac ggtgtatctt ttgaaacgat taaaaaatta
    20821 gtacaaaagc atatcggaac gaatgatgta gtcgaagtga tgactcatcc ggcatttatt
    20881 gatgaaacgt tgcgcgaaat atctagttac gtagagccgc gcatcaaaga agtttcaatt
    20941 ctaacttcaa gagaactaca agcatattta ggccaacaag aagtagagat tattagtttc
    21001 cgcgatttat aagagcatgg gcctgtcaaa ggatgtttat ttggcaggct tttcgttagg
    21061 ttaaaataat aaatgttgtc aattttatag aaaacgtttt ataatagaga aaatacggac
    21121 aaaatacgtg aaatagcttt ttaatatacg gaattttatc aaagggagag agattatgaa
    21181 gattcgtcgc agtgaacgat taattgatat gacgcagttt ctattatcgc atccgcgaaa
    21241 gttagtgccg cttacgatgt ttgctgaacg ttatggctca gctaagtctt ctattagtga
    21301 agatttggtt atcataaaga aaacatttga agacagaggg attggtacgc tcgaaactgt
    21361 tccgggtgct gctggtggtg tgcaatatat ttcgatagcg ggaaatgacg atgtgctgga
    21421 ttttgtgcat acgctatgta atagaattgc ggaaccaaac cgtttgcttc cagggggcta
    21481 tttgtactta tctgatttac ttggagaacc agtaacgctc aaagcaattg gtaaaatttt
    21541 agcaacgaaa ttcaataacc aaaaaataga tgcgattatg actgttgcga caaaagggat
    21601 tccgattgca caagcggttg ctgaacattt aagtgtcccc tttgttatcg tacgtcgtga
    21661 tagcaaagtg acagaaggct caactgtaag cattaactat gtttcaggtt catccaaacg
    21721 aatcgaaaaa atggaattat ccaaacgaag cttagctgaa ggctctaatg tagtaattgt
    21781 ggatgacttt atgaaagctg gaggaacaat taatggtatg aaaaatctgc tagaagaatt
    21841 caacgcgcat ttagttggaa ttggcgtgtt agttgaatcc gaatatgcgg aagagcgctt
    21901 agtggatgat tacgtatctc ttgtaaaaat aaaaaatgtg aacatgaaag aaaaacaaat
    21961 cgaagttgtt gatgggaatt actttaatag ttgattctaa accctggaaa atattctggg
    22021 gtttttcttt tttgggggcg aattgctact aaaaacaaat cagtcttccg atgtacttca
    22081 ctcagttaac ttttatggta gaatgaattc tatcgttact acataaaatt caaggcttct
    22141 agactttagg agcagaagga gaacattcat gaaaaagtgg gttaaatggt taattgttat
    22201 cgtaattatc gcagtagtag ccgttggtgc ggttttcttg ctgtcgaaaa atagtggctc
    22261 cgtaacacaa gaaaaattag ttacagccaa agtaaaacaa ggagatatga aaatcaatgc
    22321 tacaggaaca ggcgcgattt ctccggtaaa cacacaagtt ccagattacg atgaacttca
    22381 attagtagcg caaatggacg aacttgatat tcctaacatc aagaaagacc aagaagtaaa
    22441 agtcacagta acagcactac ctgacaaaac ttatacagga aaagtgaaag aaatcgcaga
    22501 acaaggtcaa gtacaaaatg gtgtgtctag cttctctgta atcatttctc ttgataaaac
    22561 agacgattta aaagcgggta tgactgctga tgcttccatt ttagtaaatg agaaaaaaga
    22621 tgcactatac gttccaattg aagctgttca aaaagacagt gacgacaaat attacgtatt
    22681 agttccagaa gaaaaagaca atgggaaaac gaaaaaagtg aagaaatttg tagaaactgg
    22741 tcttcataat gaagataata tcgaaatcac taaaggtgtt aaaaaaggcg aaaaagtaat
    22801 ccttcctaca caagaaactt ctacggttcc tggtgctcct agctaagttt tttgtaagta
    22861 caaatcagac aaattgtatg aaggagggat aaacatgcca aaaccgctaa ttgacatgaa
    22921 aaatttaaca aaaacgtata cgctaggcgg agaaactttt aaagcattag acgatgttac
    22981 ttttaccgtt gagcaaggcg agtttttatc catcgttggt ccgtccggtt ccggtaaatc
    23041 cactttaatg aatatgattg gttgtttgga tgttccggat gaaggcagct atcaccttga
    23101 tgatgtagat gtttttaaac tgagcgataa taaactatcc gaaatcagaa ataaaaaaat
    23161 cggctttatt tttcagcagt ttaatttgct tccaaaatta tctgcctttg aaaatgtgga
    23221 actaccacta atttatgcag gactaagtgt ttctgcacga gaaaaagccg caatcgaatg
    23281 tttagaaaaa gtaggcttac ttgaaaaacg tagaaactta ccaacgcaac tttctggtgg
    23341 ccaacagcaa cgtgtggcta tcgcaagagc actcgccggc aaaccgcaaa ttttgctagc
    23401 agatgagcca actggtgcgc tcgattcgaa aacaggtaaa gaagtaatgg gaatcctaca
    23461 agaattgaat cgtgctggaa acaccatcgt tatgattacg catgatccaa caatcgcctc
    23521 atacggtaca agaagtatcc gtattcaaga tggtaaatta ttccatgagg aggcgacgca
    23581 agcatgaatg ttctccaaag catgaaaatg gcatggaaac aattaaaggc aagtaaatta
    23641 aggtcttttc taaccatgct aggtattatt attggtgtcg catccgttat tcttttagta
    23701 tctctaggga atggtgtaac gcaagaagtt gatgaccaaa tgggcgattt gggttcgaat
    23761 ttaattacag tagttaatag ctctgttaat ccaaacgaca aatatacgta tgatgaagta
    23821 atgaaatatc aaaacattga tggagtcaaa agcgtttctc cagaattatc tggacaagtc
    23881 aatgcaactt ttgattataa gaattcaagt aataaggtga taggcacgaa tgaccaatat
    23941 aaggccgcgc gtagcctaga aatgaaagaa gggcgtttcc tactaccgat tgataccgaa
    24001 tatggccaga aagtagctgt aataggctct acggtagcaa gtgatctatt tggttttggg
    24061 gatccgattg gcgaaaccat tagattaaac ggaatgcctt acaaagttgt tggtgtcttg
    24121 aaagaaaaag gcgcgtctat gatgggatcg agcgatgacc aaatctttat tccgatttct
    24181 tccgctcaaa ggctcctaaa agatacaaat gtccgtacaa tctatgtaga aacaaaatct
    24241 gccgaagatg ttgattttgt agtaaacaca ctagaatcac gtcttgcgat taaatttggt
    24301 gacgaaaaag aacaagaaaa aaatgcgtca tccgcacaaa tgggaccatc ttatcaagtc
    24361 attaatcaac aagagattct caatgctttc aacacgatta gtacaacgct aactactgcg
    24421 cttggtgcga ttgctgctat ttcacttgtt gttggtggta ttggaattat gaatattatg
    24481 ctagtttctg ttagtgagcg aacgagagag attggtataa gaaaagcgct cggagctaaa
    24541 aaacgagcca tcctgttaca attcctaatt gaatccattg ttattagtgt ctgtggtggg
    24601 attatcggta ttattatcgg ggtctcagga gcgctcatat ttggctcagt cgcaggtata
    24661 tcgtcaggaa taactgcagg aaccattatc ttctccttcg tattctcact atgtatcgga
    24721 gtgatatttg gtatcgcacc tgctaataaa gcttcgaaat taagaccaat tgacgcatta
    24781 agatccgaat aaataaaaga agcctgaaat aagctgtttc gggcttcttt ttttactaaa
    24841 attagctact aagttgtctt gtcatctata tttaatcttt ttgtcacaat taaacgcttt
    24901 caatagccgg ttttggtaaa aaatttagaa taaaaataaa attaattctc gcaacatgca
    24961 ttagaatggg gttttggggg aatatagtct ctgttggtta attagagtaa atgggataga
    25021 ga
//
LOCUS       DASDYK010000031        24858 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.031, whole genome shotgun sequence.
ACCESSION   DASDYK010000031 DASDYK010000000
VERSION     DASDYK010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 24858)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24858)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24858
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.031"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(237..704)
                     /locus_tag="U0308_001264"
     CDS             complement(237..704)
                     /locus_tag="U0308_001264"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEM2316233.1"
                     /translation="MAEKMNVESFNLDHTKVKAPFVRLAGTKVGVHGDEIYKYDVRFK
                     QPNKEHMEMPALHSLEHLMAELARNHTDKLVDISPMGCQTGFYVSFINHSDYDDALEI
                     IATTLTDVLAATEVPACNEVQCGWAASHSLEGAKALAAEFLDKRDEWKNVFGE"
     gene            complement(788..3247)
                     /gene="parC"
                     /locus_tag="U0308_001265"
     CDS             complement(788..3247)
                     /gene="parC"
                     /locus_tag="U0308_001265"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEM2316234.1"
                     /translation="MSNPEQHIQDLALEEVMGDRFGRYSKYIIQERALPDVRDGLKPV
                     QRRILFAMNVEGNTAEKGFRKSAKTVGNVIGNYHPHGDSSVYEAMVRMSQDWKVRNML
                     IEMHGNNGSVDGDPPAAMRYTEARLSPISAELLRDIEKETVDFIPNFDDTSSEPTVLP
                     ARFPNLLVNGSTGISAGYATDIPPHNLTEIIEAVIKRLDNPLSTTDDIMKIVKGPDFP
                     TGGIIQGIDGIRKAYQTGKGRVVVRSKTEIEDIRGGRKQITIHEIPYEVNKANLVKRM
                     DELRIEKKIEGISEVRDETDRTGLRIAVELKKDANAEGVLNYLFKNTDLQVSYNFNMV
                     AINKKRPELMGIIPMLDAYIEHQKEIITKRSEYDIRKARARQHILEGLIKALSILDEV
                     IKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSLQLYRLTNTDIHELQSEAKSLAEQI
                     SVLEKILGDEAELIAVLKEELAEIKKKYKTARRTEVQAEITEIKIDTEVLVANEDVIV
                     SVTKEGYVKRTSQRSYAASNGAELAMKEADHAIFIQKMNSLDSLLLFTSKGNFIYRPV
                     HELPDIRWKNLGDHVSHLASDLSAGEEIRSAIAIQAFTEEKRFLFVTKNGMTKQSAIT
                     NYKPQRYSKSMMAIKLKGDDELLNVHLIDGTEDIFLATKNGYGLRYSITEIPESGART
                     AGVKAINLKQDDIVIGGIVLMPNEQKHILLATQRGSLKQMKASEFEPISRAKRGLLML
                     RELKSNPHRFIGITLADNNDHLFIETNTDQIVEIDVANLRITDRYSNGSFVLDETMEG
                     EPTSIWLAIPEIKDTSDAKDE"
     gene            complement(3244..5211)
                     /gene="parE"
                     /locus_tag="U0308_001266"
     CDS             complement(3244..5211)
                     /gene="parE"
                     /locus_tag="U0308_001266"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEM2316235.1"
                     /translation="MNRNEYNDDSIQVLEGLEAVRKRPAMYIGSTDVRGLHHLVYEIV
                     DNSVDETLAGFGKKIVVTLHVDGSVSVSDEGRGMPVGMHKTGKSTVEVILTVLHAGGK
                     FGQEGGYKTSGGLHGVGSSVVNALSEWLVVTINRDGATYQQKFKDGGKPDGTLKKIGK
                     SKATGTTIRFKPDPAIFPTTSFNYETLSERLRESAFLLKGMLIELIDERVGMAEAFHF
                     EEGVKNFVEYINEGKDVLHPVASFEGENATIEVEMAFQFNDGYSENILSFVNNVRTRG
                     AGSHESGMKAAMTRIFNDYARRVNLLKEKDKNLEGSDIREGLSAVLSIRVPEKILQFE
                     GQTKEKLGTQEARQAVDAVVAEHLAYFLAENPETSSLLVKKAVKAREAREAARKAREE
                     TRNGKKKKRSETLLSGKLTPAQSRNPNKNELYLVEGDSAGGSAKQGRDRRFQAILPLR
                     GKVINTEKAKLQDILKNEEISTIIHTVGAGVGTEFDVEDCNYDKVVIMTDADTDGAHI
                     QVLLLTFFYRYMRPLVEAGKVFIALPPLYKVSRGSGKKEVIEYAWTDEELDSAIQKIG
                     KGYMIQRYKGLGEMNADQLWETTMNPDTRTLIRVRVDDSARAERRVATLMGDKVEPRR
                     QWIEKHVEFSMEDSQNILENENMMVEEAKDI"
     gene            complement(5392..5799)
                     /locus_tag="U0308_001267"
     CDS             complement(5392..5799)
                     /locus_tag="U0308_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEM2316236.1"
                     /translation="MQNPTKEEIQQILKKAKVIAVIGLSDKPDRTSYRVSQIMQQAGY
                     KIIPVNPNADEILGEKAVKRLTDIKEHVDIVNVFRRSEFLPEIAEAFDQIDADVFWAQ
                     LGIANQEAFDFLTEKGYPTVMDYCIKVAYQEMD"
     gene            5957..6553
                     /gene="plsY"
                     /locus_tag="U0308_001268"
     CDS             5957..6553
                     /gene="plsY"
                     /locus_tag="U0308_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEM2316237.1"
                     /translation="MTINLILLSLLAYVIGSIPSGLWIGKIFYKKDIRDFGSGNLGAT
                     NSFRVLGIKAGSIVTVMDILKGTVATLLPFFFQLNVDHHFWLLTGAFAIIGHSFPLFA
                     GFRGGKAVATSAGVILAYAPLLFVAALVVFLVTLKLSKYVSLSSMIGALAALIISLFM
                     GDWILIILVACIALFVIWRHRANITRIRNGEEPKIKWM"
     gene            complement(6595..7467)
                     /locus_tag="U0308_001269"
     CDS             complement(6595..7467)
                     /locus_tag="U0308_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
                     /protein_id="HEM2316238.1"
                     /translation="MIKLENEVLLVEMKTAGAELTRIFHKDTGLEYLWNADSKFWGRH
                     SPVLFPTVGRLVEDTYLVDGKPYHLGQHGFARDRDFQVIEQTEKSVRFELDADEDSLA
                     VYPYKFKLSIIYTIEKNTVAVSYEVENTDNKRIYFSIGAHPAFNLPLTDGTTFEDYYL
                     DFGTEENLETLCLEGPYRSGEIKKVVDKPAQYLPLSYDLFKNDALIFEALKQKEMTIK
                     SDKTPHFVKVSFPEFPFVGVWTAKPGTPFLCIEPWYGIADGAGESVELRDKAGIEHLE
                     PEAVFASEYEITVG"
     gene            complement(7470..7781)
                     /locus_tag="U0308_001270"
     CDS             complement(7470..7781)
                     /locus_tag="U0308_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316239.1"
                     /translation="MAFGVKRDEMELWKEKAARGEIAIITHYWLDDRFPESKTVTKVA
                     CVDLKKLQQWGKQYGLAPDWIDNRRKNFPHYDLFGEMQLVVLKKEKAFEQIERFHLEE
                     K"
     gene            complement(7804..8223)
                     /locus_tag="U0308_001271"
     CDS             complement(7804..8223)
                     /locus_tag="U0308_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEM2316240.1"
                     /translation="MEIAETTIEVRYAETDQMGVVYHNNYLVWMEIGRTRLIEKLGFR
                     YFDMEEAGYLSPVLDVHIHYVKPLRYGQKAVVKTWIKGYDGLRVTYGYEICYEDTNEV
                     AITGETQHVCVTKEDFRPVSLRRTFPNWHEAYLKALE"
     gene            complement(8327..9106)
                     /gene="codY"
                     /locus_tag="U0308_001272"
     CDS             complement(8327..9106)
                     /gene="codY"
                     /locus_tag="U0308_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-sensing pleiotropic transcriptional
                     regulator CodY"
                     /protein_id="HEM2316241.1"
                     /translation="MTLLEKTRKINAMLQNAAGKTVNFKEMADTLTDVIEANTYIVSR
                     KGKLLGYSEALPIENDRMKQMLTERQFPEEYTQSLFNVGETSSNLEVSSQYTAFPIEN
                     SELFTKGLTTIVPIVGGGERLGTLILSRLESNFTDDDLLLAEYGGTVVGMEILHEKAE
                     EIEEEARSRAVVQMAISSLSYSELEAIEHIFDELNGKEGLLVASKIADRVGITRSVIV
                     NALRKLESAGVIDSRSLGMKGTFIRVLNDKFLVELEKLKNN"
     gene            complement(9127..10536)
                     /gene="hslU"
                     /locus_tag="U0308_001273"
     CDS             complement(9127..10536)
                     /gene="hslU"
                     /locus_tag="U0308_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HEM2316242.1"
                     /translation="MTNITLMNQLTPKQIVEKLDQYIIGQTGAKKSVAVALRNRYRRQ
                     LMDESIRDEIIPKNILMIGPTGVGKTEIARRIAKIVRAPFSKVEATKFTEVGYVGRDV
                     ESMVRDLVEVSVRLVKEEKMQLVRVKAEKNAEKRLIKLLAPSQKKKQTTSQNPLEALF
                     GGMNQPDESPEEEVDQELKNKRSQIEWRLQNGELDDEIVTVEVKEQQNPMLDMMRGAG
                     MDQMNGMQDALSGMFPAKKKKRKVTVREAKKILFEDEASKLIDADELAAEGIHRAEQM
                     GMIFIDEIDKIASKEGGGNAQVSREGVQRDILPIVEGSQISTKYGTVNTEYILFIAAG
                     AFHMSKPSDLIPELQGRFPIRIELDKLTQEDFYKILTEPDNALIKQYKALLKTEGIDL
                     IFTKEAVERIAEIAFQVNQDSDNIGARRLHTILEKLLEDLLFEAPEINMESIKVTENY
                     VNEKLAPIMQNKDLTQFIL"
     gene            complement(10550..11089)
                     /gene="hslV"
                     /locus_tag="U0308_001274"
     CDS             complement(10550..11089)
                     /gene="hslV"
                     /locus_tag="U0308_001274"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEM2316243.1"
                     /translation="MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLF
                     HDKVIAGFAGSVADAFTLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLI
                     VMDKDTLLLVSGTGEVIEPDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHAL
                     EIASEICVFTNDHITVEEL"
     gene            complement(11110..12012)
                     /gene="xerC"
                     /locus_tag="U0308_001275"
     CDS             complement(11110..12012)
                     /gene="xerC"
                     /locus_tag="U0308_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEM2316244.1"
                     /translation="MIQEGKLEQQFFDYLHSERNYSVNTSTAYENDLLDFRRFLNEQS
                     ITTYQQVTFLDVRIYLTELKQKSFSRTTVARKISSLRSFYTFLLRENVINENPFTYVS
                     HAKNQLRLPKFFYSEEMEALFQVVYEDNETLTLRDRVLLEVLYGTGIRVSECAGILLP
                     DLDTSYQAILIRGKGNKERYVPFGVYAEDAITDYLPERANLMSRYKKSHDALLVNHYG
                     DPLTTRGIRYCLSKIISKASLTRKIHPHMLRHTFATDLLNNGADMRTVQELLGHASLS
                     STQIYTHVTKEHLKSTYMKHHPRA"
     gene            complement(12295..13599)
                     /gene="trmFO"
                     /locus_tag="U0308_001276"
     CDS             complement(12295..13599)
                     /gene="trmFO"
                     /locus_tag="U0308_001276"
                     /EC_number="2.1.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FADH(2)-oxidizing
                     methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-
                     methyltransferase TrmFO"
                     /protein_id="HEM2316245.1"
                     /translation="MEKSVNVIGAGLAGSEAAWQLVKRGVKVDLYEMRPVKQTPAHHT
                     DKFAELVCTNSLRANGLTNAVGVIKEEMRILDSIIIEAADKASVPAGGALAVDRHEFS
                     GYITDKVKNHPLVTVHTEEVTTIPEGPTIIATGPLTSPALADEIKQLTGEEYLYFYDA
                     AAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMSEEEFNAFYEALVTAETAALKEFEK
                     EVFFEGCMPIEVMAKRGIKTMLFGPLKPVGLEDPKTGKRPYAVLQLRQDDAAGTLYNM
                     VGFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLF
                     FAGQMTGVEGYVESAASGLAAGINAANFVEEKELVVFPAETAIGSLAHYITSASKKSF
                     QPMNVNFGLFPELETKIRAKQERNEKLAERALNAIKRVAEQL"
     gene            complement(13662..15740)
                     /gene="topA"
                     /locus_tag="U0308_001277"
     CDS             complement(13662..15740)
                     /gene="topA"
                     /locus_tag="U0308_001277"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEM2316246.1"
                     /translation="MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGV
                     DTEHDYEPRYITIRGKGPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLANSLELDQ
                     SDKLRVVFNEITKEAVKESFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKK
                     GLSAGRVQSIALRIIIDREKEINNFKPEEYWTIDGNFLKGKKKFQANFYGVNGKKKKL
                     STADDVKEVMSAIKGKSFDVTDVTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMM
                     LAQQLYEGITLGKQGTVGLITYMRTDSTRIADSAILEASNYIKETYGPEFSRNHKRSD
                     KNAKGAQDAHEAIRPTSAMRSPQEVKEFLTRDQLRLYRLIWERFIASQMTPAVLDTMR
                     VDLDNNGVNFRANGSKIKFHGFMKVYVESNDDNTEEKENILPDLKKGDKVQSESLEQR
                     QHFTQPPPRYTEARLVKTLEEIGIGRPSTYSPTLDTIQRRNYVSLTNKRFIPTELGEI
                     VNEMIEEYFPEILDVKFTANMESELDEVEHGEVEWVKVIDEFYKRFEPNVIKADAEME
                     KIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACSRFPDCRNTKAIVKEIGVTCPKCEK
                     GHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERACPKCEKRALVEKKLKKGVQVQCT
                     NCDYKESTQQ"
     gene            complement(16013..16873)
                     /gene="dprA"
                     /locus_tag="U0308_001278"
     CDS             complement(16013..16873)
                     /gene="dprA"
                     /locus_tag="U0308_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEM2316247.1"
                     /translation="MDFKQRHTWLKIASCKSISAKKRASIWQKLTEFDQYEMTTQTFA
                     ESFFPVDKLAQILMELETAEACFFDDVTLIWILDDAYPALLREIYEAPPILFCKGNID
                     LLQQQAIAIVGTRQMSEYGRKACMKIASELAENKLTIVSGMAIGIDSTAHRATLNKQG
                     TTIAVLGSGVNKVYPKKNELLAKEIVKEGLLLSEYLPDEEAKRWHFPERNRIISGLAI
                     GTVIIEAAERSGSLITADIALEQNRQVFAVPGNIFIDTWQGTNYLIQEGAKLVMNSNN
                     IIEEFIQIKP"
     gene            complement(17007..17792)
                     /locus_tag="U0308_001279"
     CDS             complement(17007..17792)
                     /locus_tag="U0308_001279"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEM2316248.1"
                     /translation="MSDSISVIREKLNQVTSEHDPFFRKCMQDERKGVEKLLETTRRK
                     WEKEAQLRNKLEEMKQYETDLFQQGYKYIAGVDEVGRGPLAGPVVAAAVILPADFSVV
                     GINDSKQLSEAKRDALFETIKKEAIAIGVGIIEHDVIDQVNIYEATKLAMREALDQLT
                     PEPDFVLIDAMPLRYTEAELSLIKGDTKSISIAAASIIAKVTRDRLMQMYDEKYPGYD
                     FANNMGYGTKKHLLGLDTIGICPIHRISFAPVKEAKLHFDSLK"
     gene            complement(17789..18652)
                     /gene="ylqF"
                     /locus_tag="U0308_001280"
     CDS             complement(17789..18652)
                     /gene="ylqF"
                     /locus_tag="U0308_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HEM2316249.1"
                     /translation="MTIQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPML
                     EEIIHQKRRVIILNKADTADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEK
                     LMAEKFDRLRSKGMKPRAIRAMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQW
                     IKVGKTLELLDTPGILWPKFEDQEIGYKLALTGAIKDDLLQMEEIAGYGLRFLEKHYP
                     DRLQNWLKVETVSEDPIETLAFIAEKRGLLDRYNDPDYSRAAETVVREIRQQKLGRMS
                     FDFPNWEDEVE"
     gene            complement(18662..19204)
                     /gene="sipZ"
                     /locus_tag="U0308_001281"
     CDS             complement(18662..19204)
                     /gene="sipZ"
                     /locus_tag="U0308_001281"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I signal peptidase SipZ"
                     /protein_id="HEM2316250.1"
                     /translation="MKEKNLKRLWSWIWAAVLAVLIAVIIRFYLFVPILVDGISMMPT
                     LHSDDRVIINRFGNVDRFDVIVFRESDGKEYIKRVIGLPGDTVEYKEDQLYINGKKYN
                     EPYLDTYKEKLKDGYLTDDYSSKDQLDGGKIPKDTYFVLGDNRRASKDSRIIGPIPFS
                     KVLGTTPICYWPIEDAKLID"
     gene            complement(19306..19875)
                     /gene="sipY"
                     /locus_tag="U0308_001282"
     CDS             complement(19306..19875)
                     /gene="sipY"
                     /locus_tag="U0308_001282"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I signal peptidase SipY"
                     /protein_id="HEM2316251.1"
                     /translation="MTDQYDKKPKKKSGAHQLLSWVLVIVAALAIALVIRNFVVAPVK
                     VEGTSMVPTYQDGDRIFIEKISKPDRFDIIVFDEPPMIGSGEHFIKRVIGLPGDKIAF
                     KNGELYLNGKRKVENYLPEGTLTLWNPDPTQKPYIADYTLEDMTGESTVPKGKLFVLG
                     DNRGGSSDSRVFGFIDDSMVNGTVIQFGK"
     gene            complement(19910..20476)
                     /gene="sipX"
                     /locus_tag="U0308_001283"
     CDS             complement(19910..20476)
                     /gene="sipX"
                     /locus_tag="U0308_001283"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I signal peptidase SipX"
                     /protein_id="HEM2316252.1"
                     /translation="MKSENKFFSGAFGWIKIILIALILAFGIRYFLISPVTVNGKSMD
                     PTLHDGEHLFINKVSDPKRFDIIVFPAPDEENAEYIKRVIGLPGDKVEYKEDQLYING
                     KKYDEPYLDSEKEALKNGYLTTDAEGDPNFTMADIPNSDGSLTVPKGELFVLGDNRQV
                     SKDSRYIGFISQDTVLGKVISFGKSLER"
     gene            complement(20595..21854)
                     /gene="clpX"
                     /locus_tag="U0308_001284"
     CDS             complement(20595..21854)
                     /gene="clpX"
                     /locus_tag="U0308_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HEM2316253.1"
                     /translation="MFKFNDEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCNE
                     IIEEELGISEFVDFGEVPKPQEIRHILSDYVIGQERAKKALAVAVYNHYKRINSNETK
                     EDEVELSKSNICLIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENIL
                     LKLIQSADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVA
                     SVPPQGGRKHPHQELIQIDTGNILFIVGGAFDGIEQIVKNRMGEKVIGFGTDNAKLKD
                     DETYLSRVVPEDLLKFGLIPEFIGRLPVIATLEQLDEAALVSILTEPKNALVKQYKRM
                     LELDDVELEFEPTALIEIAKEAIERKTGARGLRSIIEQIMLEVMFEIPSRDDITKCII
                     TEKAARGEEEPQLQLEDGSIIPIKTSA"
     gene            complement(22039..23322)
                     /locus_tag="U0308_001285"
     CDS             complement(22039..23322)
                     /locus_tag="U0308_001285"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEM2316254.1"
                     /translation="MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGF
                     RKGKVPRQIFNQRFGEEALFQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESMEKGE
                     TWVLTAEVTVKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPA
                     ENGDTVILDFEGFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELT
                     FPEEYHAEDLAGQPVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRL
                     QEAKEESVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELY
                     YQFTGQTEEAMHAQMEKDAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGM
                     EKDAVRAALGDMSELKSDLKIRKAIDVLLDSAVEK"
     gene            complement(23437..24375)
                     /locus_tag="U0308_001286"
     CDS             complement(23437..24375)
                     /locus_tag="U0308_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316255.1"
                     /translation="MSGSGAFFPMSVKKFLEKGITSLSEEEKMSTLHYLENAYHQEPC
                     NEEIVHRLIQFYNQTDKTKKAQEIGQNFLTMNGYDKEILGELSVTFMKEDNMDTYFTL
                     VRHYMEEEKKEATEEIADNVIPFPKQFVPRRDIREFASWHTTEQLEFLQEARFLEIDS
                     FLPAFKAFLADDSFSPFVQSMIFELMQEKEINEDITVQKIDKHGIFNPSLVPMLADNK
                     FAEAIFAGLAEMLEHSNPSLLEQVIGIIQQHLFMLYPFELEPQEVDVWINAYYKWANA
                     MYGNYCVISDDVNHLAVEEAISIIEELEIRQQNYFI"
     gene            complement(24637..>24858)
                     /locus_tag="U0308_001287"
     CDS             complement(24637..>24858)
                     /locus_tag="U0308_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316256.1"
                     /translation="KNMEKGEEYTLFLEKNPDGENYILSNAVISKFPVEELPEEELFL
                     DGGQTTEETDSIEEIYQEVYQEVLEEFGE"
BASE COUNT         6785 a         5257 c         4057 g         8759 t
ORIGIN      
        1 tactaatttt tctgtttgcg ttgatttgac tatactagtt ttcaaaacag agatggctgt
       61 atctccagaa cattagaatc agatagactg atctgggcaa atcacaaaaa atacaagtga
      121 ttgcatggca agtctccgtt agtattccat acgacattta aattcgttat taattttgat
      181 aaaaatatgt tatttataaa aagcatctac cgatattccg atagatgctt tcatttttat
      241 tcaccaaata catttttcca ttcgtctcgt ttgtctaaaa attctgctgc aagcgctttt
      301 gcaccttcta aactatggct tgctgcccaa ccgcattgga cttcattgca tgcaggaact
      361 tctgtcgcag ctaaaacatc cgttagtgtt gtggcgatga tttctagtgc atcatcatag
      421 tcgctatgat taatgaagga aacataaaag ccagtttggc atcccattgg actaatgtct
      481 actaatttgt cagtatgatt tcttgcaagt tctgccatca aatgttctaa agagtgtagc
      541 gctggcattt ccatatgttc tttattgggt tgtttgaagc gaacatcata tttgtatatt
      601 tcatctccat ggacgcccac tttcgttccc gccagtctca caaaaggtgc ttttactttc
      661 gtatggtcca aattaaaact ttctacattc attttttctg ccatgcgtat ccctcctctt
      721 attctttgtt attatatcaa aaaaaaagaa tccttgcata tttctataca agaactcttt
      781 ttcttcctta ttcatctttt gcatctgagg tatcttttat ttcgggtatt gctagccaaa
      841 tagaagttgg ttcgccttcc attgtttcat cgagtacgaa ggatccgtta gaatagcgat
      901 ccgttattcg tagattggca acgtctattt caacaatttg gtctgtgttt gtttcgataa
      961 ataggtggtc gttattatca gcaagagtta taccaatgaa gcgatgtgga ttgcttttca
     1021 gttcgcgtaa catcaataag ccacgtttcg ctcttgagat tggttcaaat tcgcttgctt
     1081 tcatttgttt gagtgagcca cgttgtgtgg caagaagaat atgtttttgt tcgttcggca
     1141 taaggactat accgccaata actatatcat cttgttttaa gttaatcgct tttacacccg
     1201 ctgttcttgc acctgattct ggaatttcag taatagaata acgaaggccg taaccatttt
     1261 ttgttgctaa gaaaatatct tctgtgccat caatcaaatg aacatttaac agctcatcgt
     1321 caccttttaa tttaattgcc atcatggatt tagaatagcg ttgtggtttg taattcgtaa
     1381 tagctgattg cttggtcatg ccgtttttag taacgaataa aaagcgtttt tcttccgtaa
     1441 aggcttgaat tgcaatagca gaacggattt cttcacctgc cgataaatca ctggccaagt
     1501 gacttacgtg atctccgagg tttttccagc gaatatctgg caactcatgt actggtcgat
     1561 aaatgaaatt ccctttgctc gtgaataaca ggagcgaatc aagtgaattc attttttgga
     1621 taaagatggc atggtctgct tctttcatgg ctagttccgc accgtttgat gctgcataag
     1681 aacgttggct cgtacgtttc acatagcctt cttttgtcac agaaacaatc acatcttcat
     1741 tcgcaacaag tacttctgta tcgattttga tttctgtaat ttctgcttgc acttctgtac
     1801 ggcgagcagt tttatatttt ttcttaattt ccgctagctc ttcttttaac acagcgataa
     1861 gctctgcttc atcacctagg attttttcaa gaacactaat ttgttctgct aaggattttg
     1921 cttcactttg aagttcatgt atatctgtat ttgttaaacg ataaagttgt aaagatacaa
     1981 ttgcttctgc ttgtttttcg ctgaaatcat attttgtttg aagatttagt tttgcatcgc
     2041 gtttgtcttt tgaaccacga attaatttaa tgacttcatc taaaatagac aaagctttaa
     2101 ttaaaccttc taaaatatgt tggcgagcgc gcgctttacg aatatcgtat tcagagcgct
     2161 tcgtaataat ttctttttgg tgttcaatat aagcgtcaag cattgggata atgcccatta
     2221 gctccggacg ttttttatta atagcaacca tgttaaaatt atagcttact tgtaaatctg
     2281 tatttttaaa caggtagttc aaaacacctt cagcattggc atcttttttt agttcaacag
     2341 caatacgaag tcctgtgcgg tcggtttcat cacgtacttc tgaaatacct tcaatttttt
     2401 tctcaattcg aagttcatcc atgcgtttaa ctaaattagc tttatttact tcatatggaa
     2461 tttcatgaat tgtaatttgt tttctaccgc cacgaatatc ttcaatttct gttttagaac
     2521 gaacgacaac gcgtcctttt ccagtttgat aagcttttcg aataccatca atcccttgaa
     2581 taatcccacc tgttgggaaa tctggacctt tgacaatttt cataatatca tccgttgtgg
     2641 aaagtgggtt atctaatcgt ttaataacag cttcgatgat ctctgttaaa ttatgcggcg
     2701 gaatatctgt tgcataacca gcggagatac cggtagaacc attcactaaa aggtttggaa
     2761 aacgtgctgg taaaacagtt ggctcactag atgtgtcatc aaagttagga ataaagtcaa
     2821 ctgtttcctt ttcaatatcg cgtaaaagtt ctgctgatat aggagaaagg cgagcttctg
     2881 tataacgcat tgctgcaggc ggatccccgt cgacactacc gttattacca tgcatttcaa
     2941 tcagcatatt acgtactttc cagtcttgac tcatccgtac cattgcttcg taaactgaag
     3001 agtcaccatg tggatggtag ttaccaataa cgtttccgac cgttttagca gatttacgga
     3061 aacctttctc agcagtattt ccttcgacat tcatcgcgaa taaaatacga cgttgtacag
     3121 gtttcagtcc gtcacgaaca tctggaagcg cacgttcttg aataatatat ttactatatc
     3181 taccaaaacg gtcgcccata acttcttcta gcgctaagtc ttggatatgt tgttctggat
     3241 tactcaaatg tctttcgcct cctcaaccat catgttttca ttttctaaaa tattttggct
     3301 atcttccata gaaaactcga catgcttttc aatccattgt cgtcttggtt ctactttgtc
     3361 gcccatcagt gtggccacgc ggcgttcagc gcgtgcagaa tcatctaccc gtacacgaat
     3421 taacgtgcgc gtatcaggat tcatcgttgt ttcccaaagt tggtcagcat tcatctcacc
     3481 aagacctttg tatcgttgaa tcatgtagcc tttaccaatt ttttggatgg cagagtctaa
     3541 ttcttcatct gtccaagcat attcgattac ttctttttta ccagaaccac ggcttacttt
     3601 gtaaagtggt ggtaaggcaa taaatacttt acctgcttcc actagtgggc gcatataacg
     3661 atagaaaaag gttaatagta atacttgaat gtgtgcgcca tcggtatcgg catcggtcat
     3721 gataactact ttgtcatagt tacaatcttc tacatcgaac tccgtaccaa ctcccgcacc
     3781 aactgtatgg ataatcgtac taatttcttc atttttcaag atatcttgta gtttggcttt
     3841 ttctgtattg attacttttc ctcgaagtgg caaaattgct tggaaacgac ggtcacgacc
     3901 ttgtttagct gatccccccg ccgagtcacc ttcgactagg taaagttcat ttttattagg
     3961 atttcgcgat tgtgccggtg ttaattttcc agaaagaagt gtttcggaac gtttcttttt
     4021 cttgccgtta cgtgtttctt cgcgcgcttt tctggcagct tctcttgctt cgcgggcttt
     4081 aacagccttt ttaactagaa gagagcttgt ttctgggttt tcggcaagga agtaagctaa
     4141 atgttctgct acaactgcat caaccgcctg acgagcttcc tgcgtcccta gtttttcttt
     4201 cgtttgacct tcgaattgaa ggattttttc tggaacacgg atagaaagta cagctgataa
     4261 accttcacga atatcgctac cttcaaggtt tttatctttt tcttttaaaa gattcacacg
     4321 acgagcataa tcattgaaaa tccgcgtcat tgccgctttc attccagatt catgcgagcc
     4381 tgctccgcga gttcgaacgt tattaacgaa actcaagata ttttcagaat aaccatcatt
     4441 gaattggaac gccatttcta cttcaatggt cgcattttcc ccttcaaagc tagctacagg
     4501 atgaagcaca tctttacctt cattaatata ttcaacaaag tttttcacac cttcttcaaa
     4561 gtggaaagcc tctgccatgc caactcgttc atcaattaat tcaattaaca tcccttttaa
     4621 aagaaatgct gattctctta gacgttctga taaggtttca tagttaaatg aagtcgttgg
     4681 aaaaattgct ggatctggct taaagcgaat cgttgtccca gtagcttttg attttccgat
     4741 ttttttcagt gttccatctg gctttccgcc gtctttaaat ttttgttggt aggttgcgcc
     4801 gtcacgatta attgtaacta ctaaccattc agagagcgca tttacaacgg atgaaccaac
     4861 accgtgaagc ccaccacttg ttttatatcc gccttcttgg ccgaacttac caccggcgtg
     4921 aagaacagtt aaaataactt ctaccgtaga cttacctgtt ttgtgcatcc caacaggcat
     4981 cccacgacct tcatcgctaa cactaacact gccatccacg tgaagtgtca caacaatttt
     5041 cttaccaaaa cctgcaaggg tctcatcgac cgagttgtcc actatttcat atactaaatg
     5101 gtgcagcccg cgtacatctg ttgaaccgat atacatcgct gggcgtttcc ggaccgcttc
     5161 cagtccttca agcacctgaa tagaatcatc attatactca ttccgattca tatttcaaaa
     5221 ctcccttcat tccgtcaatc tacaactttc acgttgttat tcgcttaaaa ccactttatc
     5281 agaatagcat taactagctg attaataaag tgatagttta gtgacaaatt ccttttcata
     5341 aaaaaacagg ctctgctata agaacctgct tccttcaaaa atggtgttta attaatccat
     5401 ttcttgataa gcaaccttaa tgcaataatc catgacagta ggatatcctt tttctgtcaa
     5461 aaaatcaaat gcttcctgat tagctatgcc aagctgtgcc caaaatacat ctgcatctat
     5521 ttggtcaaaa gcctccgcta tttcaggtaa aaactctgag cgacgaaaga cattcacaat
     5581 atccacatgt tccttgatat ccgttaaacg cttgacggct ttttcgccaa gaatttcgtc
     5641 tgcattaggg ttcactggta taattttgta cccagcttgc tgcattattt gactcactcg
     5701 gtaacttgtg cggtctggtt tatcactcaa accaatgact gcgattactt ttgccttctt
     5761 taagatttgc tggatttctt cttttgttgg attttgcatt agtctaatcg ccccctacta
     5821 ttctttctaa tcataagcta tttttgcggt tttttcaact tttcatcgtg atttgtccta
     5881 acaatttagc caatcttctt cattttgtgc tataattctt tatggaaaac atcatttctt
     5941 cttgaggggt ttaaaaatga caattaattt aattctgctt tctttattag cctatgtgat
     6001 tggttcgata ccgtctggtt tatggattgg caaaattttt tacaaaaagg atattcgcga
     6061 tttcggtagt ggtaatttag gcgcgacgaa ttcattccgg gttctcggaa tcaaagccgg
     6121 tagtatcgtg acagtgatgg acattttaaa agggactgtc gcaacgttgc ttccattttt
     6181 ctttcaattg aatgtagacc atcatttttg gttgctaact ggagcatttg ctattattgg
     6241 gcatagtttc ccgcttttcg caggatttag aggcggaaaa gcagttgcta cttcggcagg
     6301 tgtcatcctt gcctatgcac cattactctt tgtagccgca cttgtagtct tcttagttac
     6361 acttaaactt agcaaatatg tatcgctcag ctcgatgatt ggagcacttg cagcgttaat
     6421 tatttctctt ttcatgggag actggatttt aattattctt gttgcttgta tcgcactctt
     6481 tgtcatctgg cgtcaccgag caaatatcac tcggattcgt aacggcgaag aacccaaaat
     6541 aaaatggatg taataaaacc cagaagatgc atttcgctct tctgggtttt cgttttaacc
     6601 tactgtaatt tcatattcgg aagcaaagac agcttctggc tctaaatgct ctattcccgc
     6661 tttatctcgc agttcaacag attctccagc accatctgca attccgtacc acggttcaat
     6721 acataagaaa ggggtccccg gttttgccgt ccaaacacct acaaatggga attctgggaa
     6781 agatactttt acaaaatgag gtgttttatc tgatttgatg gtcatttctt tttgttttag
     6841 tgcttcaaaa ataagtgcat cgtttttaaa taaatcatag ctcagtggta agtattgtgc
     6901 tggtttatcg acaaccttct taatttcgcc actgcggtat ggcccttcta aacaaagtgt
     6961 ttctaaattc tcttctgttc cgaaatccaa ataataatct tcaaatgtcg tcccgtctgt
     7021 taatggtaaa ttaaaagctg ggtgcgcacc aatagagaaa taaattcgct tgttatccgt
     7081 attttcaact tcgtaggaaa cagctaccgt atttttttct attgtataaa taatcgatag
     7141 tttaaatttg tagggataaa ctgctaatga atcttcgtct gcatccaact caaaacgtac
     7201 cgatttttct gtttgctcga ttacttgaaa atcacggtca cgggcaaacc cgtgttgccc
     7261 taagtggtac ggctttccat cgactaagta agtatcttct acaagccttc caactgttgg
     7321 aaatagaaca ggtgaatgac gcccccaaaa cttgctatca gcattccata aatactcaag
     7381 tccggtatct ttatggaaga ttcgcgttaa ttctgctcca gctgttttca tttctacaag
     7441 caatacttca ttttccagtt taatcattgt tatttctcct ccaaatgaaa ccgctcgatt
     7501 tgttcaaagg ctttttcttt tttcagtaca acgagttgca tctcgccaaa caaatcataa
     7561 tgcggaaagt tttttcgacg gttatcaatc caatctgggg ctaaaccata ttgtttcccc
     7621 cattgttgta gttttttcaa atctacacat gcaactttgg ttacagtttt tgattcagga
     7681 aaacgatcat ctagccaata atgggtgata attgcaatct ctccacgggc tgctttttct
     7741 ttccataact ccatttcatc acgttttaca ccaaaagcca ttttttatca ctaccagtct
     7801 tatttattct aaagctttta gataggcttc atgccaattc ggaaatgttc ttcttaacga
     7861 tacagggcgg aaatcttctt tcgttacaca tacatgctgt gtttctcctg taatggctac
     7921 ttcattcgta tcttcatagc aaatttcata accataagta acacgaagtc catcataccc
     7981 ttttatccat gtttttacaa ctgccttctg tccgtaacgc agtggtttta cgtaatgaat
     8041 atgcacatct aataccggag aaagataacc agcctcttcc atatcaaaat aacgaaaacc
     8101 taatttttca attaatcttg ttcggccgat ttccatccat acaaggtaat tgttatgata
     8161 aacaacgccc atttgatcgg tttctgcata gcgtacttca atggttgttt cagcgatttc
     8221 cattctaaat tcctccagtc acacaagttc tactttctta ttttaccaaa gcaaaccaaa
     8281 aaaagctctc cccgaatatt ttcagagaaa gcttttctac ttttttttag ttgtttttca
     8341 atttttctag ttctacaagg aatttatcat taagtacacg gataaatgta cctttcattc
     8401 ctagtgagcg agaatcaata acgcctgcac tttctaattt acgaagtgca tttacgatta
     8461 cagaacgtgt aatgccgaca cggtccgcga ttttagaggc aacaagaaga ccttctttac
     8521 cattcaactc atcgaaaata tgctcaatag cttctaactc actgtaagaa agagagctaa
     8581 tcgccatttg cacaacggca cggctacgag cttcttcttc aatttcttct gctttttcat
     8641 gcaagatttc cattccaaca actgttccac catattccgc taaaagtaaa tcatcatcag
     8701 tgaaattgct ttctaagcga gataggataa gtgttccaag acgctcacca ccacctacga
     8761 taggtacgat agttgttaaa ccttttgtga ataattcact gttttcgatt ggaaaagcag
     8821 tatattggct tgatacttct aagttagaag aagtttcgcc tacattgaaa aggctttgcg
     8881 tatattcttc tggaaattgg cgttctgtta gcatttgttt catacgatca ttttcgattg
     8941 gaagtgcttc agaatagcca agtaatttac ctttacggct tacgatatat gtgtttgctt
     9001 caatgacatc tgtaagtgta tctgccattt ctttgaagtt tactgttttt cctgcagcat
     9061 tttgtaacat agcattaatt tttcttgttt tttctaataa agtcattatt agatcctcct
     9121 agtattttat aaaataaatt gtgttaaatc tttattctgc ataattggtg caagtttttc
     9181 attaacatag ttttctgtta ctttaataga ttccatattg atttctggtg cttcaaatag
     9241 taaatcttct agtaattttt ctaaaatggt atgaagtctt cttgctccga tattatctga
     9301 atcttgatta acttggaatg caatctcggc aattctttct acggcttctt tggtgaaaat
     9361 caagtcaatt ccttctgttt tcagtaaagc tttgtattgt ttaattagtg cattgtctgg
     9421 ttctgttaag attttgtaga aatcttcttg agttaattta tccagctcaa ttctaattgg
     9481 gaaccggcct tgaagctctg gaattaaatc gcttggttta gacatatgga aagcccctgc
     9541 tgcgataaat aaaatgtact ccgtgttgac tgtaccatat ttagtagaaa tttgcgaccc
     9601 ctccacgatt ggaagaatgt ctctttggac gccttcccgc gaaacttgtg catttccgcc
     9661 gccttcttta ctagcaattt tatcaatttc atcgataaaa atcataccca tttgttccgc
     9721 acgatgaatg ccctctgctg caagttcatc tgcatcaatt aattttgatg cttcatcttc
     9781 aaaaagaatt ttcttcgctt cacgtacggt tactttgcgt tttttctttt tcgctgggaa
     9841 catgcccgaa agcgcatcct gcataccatt catttggtcc attccagcgc cgcgcatcat
     9901 atcaagcatt ggattttgct gttcttttac ttctactgtt actatttcat catcaagctc
     9961 gccgttttgt agacgccatt caatttggct acgtttattc tttaattctt gatctacttc
    10021 ttcctcagga gattcatctg gttgattcat gccgccgaaa agcgcttcta acggattttg
    10081 cgatgttgtt tgttttttct tttggcttgg cgctaaaagt ttaatcagac gtttctctgc
    10141 atttttttct gctttaacac gaactaattg cattttttct tcttttacta aacgaacaga
    10201 tacctccact aagtcacgaa ccattgattc tacatcgcga ccgacatagc caacttccgt
    10261 gaatttagta gcctctactt tggaaaaagg agcacgaaca attttggcaa ttcgacgtgc
    10321 tatttctgtt ttaccaacac ctgttggtcc aatcatcaga atgtttttcg gaataatttc
    10381 atcacggatt gattcatcca ttagttgtct acggtaacga tttcttagtg ctactgcaac
    10441 tgatttcttc gctccggttt gtccaataat atattgatcc agtttttcaa caatttgctt
    10501 tggtgtcaac tggttcatta acgttatatt tgtcaaatta accactcctt caaagctctt
    10561 ctactgtaat atgatcattt gtaaacacac aaatttcaga agcgatttct agcgcatgac
    10621 gagcgatatc ctttgcttcc atttgaccac cattatgtct tttaagtgct cgcccagcgg
    10681 ctagcgcata attacctcca gaaccgatag ctaaaatacc atcgtctggt tcaataactt
    10741 ctcctgtccc tgaaactaaa agtagtgtat ctttgtccat cacgattagc atagcttcta
    10801 attttcttaa aacactgtca ctgcgccatt gttgagcaag ttcgactgat gctctttcta
    10861 agttaccatt atattcattc aatttcgctt caaatttttc aaataaagta aaagcatctg
    10921 cgactgaacc tgcaaatcca gcaattactt tatcatgaaa aagacggcga acttttttgg
    10981 cggtatgttt cattacgacc gattcaccaa gcgtcacttg accgtctcca gccatcgctg
    11041 cttttccgtc atgttgaacc gcaaatatcg ttgtagcgtg caattccatt tctttaacct
    11101 cctccaaatt taagccctag gatgatgttt catataagta gactttaaat gctcttttgt
    11161 cacgtgcgta tagatctggg tggatgataa gctagcgtgc ccaagtaact cttgtaccgt
    11221 ccgcatatcc gccccgttat taagtaagtc tgttgcaaat gtgtggcgta acatatgcgg
    11281 atgaattttc cgagttaatg aagctttact aattattttc gacaagcaat acctaatgcc
    11341 cctggtcgtc aaaggatcac cgtaatgatt cacaagtaaa gcatcatgtg actttttata
    11401 gcgagacata agattggcac gttctggcaa ataatctgta atcgcatctt ctgcatacac
    11461 cccgaatggc acatatcgtt ctttattccc ttttccgcgt atgaggatgg cttgataaga
    11521 tgtatctaag tcaggcaaca gtattccagc acattcactc acccgaattc ccgtaccata
    11581 taacacctct aaaagcactc tatctcgcaa tgtaagcgtt tcattatctt catagaccac
    11641 ttgaaacaaa gcttccattt cttctgaata gaaaaatttg ggaagcctta actgattttt
    11701 cgcatgtgat acgtaagtaa acggattttc gttaataaca ttctctctta aaagaaaagt
    11761 gtaaaaactc cgtaaacttg aaatttttct agctacggtt gtacgagaaa aagatttttg
    11821 ctttaattcc gtcaaataaa tacgcacatc tagaaaagta acttgctgat atgtggtaat
    11881 agattgttca tttaaaaagc ggcgaaaatc aagtaaatca ttttcataag ctgtactagt
    11941 gttcactgaa taattacgtt ctgagtgaag atagtcaaag aactgttgct ctaacttccc
    12001 ctcttgtatc atacgtatac acctctcaaa cactatcatg ttaacatatc aatatccacg
    12061 ttgcaataat tttatacatt tttcgcaact ttttgaatta atctgcattt acaatcaatt
    12121 taaataaaac acttaacttt tgtgaaaaaa ccaacattta ttaacaaaat ctgtctagac
    12181 catttatcgg aaagaaaaac tgtctttcca ccactatcaa ctctcttgaa ataccaaagt
    12241 agccatcgtg atgaaaagaa cagcaaagaa tagtcctcaa ttattatagt gtttttatag
    12301 ttgttctgca acccttttta ttgcatttag cgctctttca gctaattttt cattacgttc
    12361 ttgttttgca cgaatttttg tttcaagctc tgggaagagt ccaaaattaa cattcattgg
    12421 ttggaacgat tttttactag cactcgtaat gtaatgggct agactaccaa tcgccgtttc
    12481 tgccgggaaa accactagtt ctttttcctc tacaaaattg gccgcattaa tccccgccgc
    12541 aagtccacta gccgcggatt caacatatcc ctctacacct gtcatttgtc cagcaaagaa
    12601 caaatcattg cgtgttttca gttggtaagt tggttcaagc acagttggcg agttaataaa
    12661 tgtgttacga tgcattacac cataacgtac gatttcagca ttttcaagtc ctggaatcat
    12721 tccgaaaaca cgtttttgct caccccattt aaggtgcgtt tggaaaccta ccatgttgta
    12781 aagtgttccc gctgcgtcat cttgtctaag ttgcaacaca gcataaggtc ttttcccagt
    12841 ttttggatct tccaaaccaa cgggctttaa tggaccaaat aacatcgttt taattccgcg
    12901 ttttgccatt acttcgattg gcatacatcc ttcgaaaaac acttcttttt caaattcttt
    12961 taaagcagcc gtttctgccg ttactaatgc ttcataaaaa gcattgaatt cttcttctga
    13021 catcgggcag tttaagtaag cagcttctcc tttatcatag cgggatttca aataaacttt
    13081 atccatatca atgctatctt tttcaattat tggtgctgct gcatcataaa agtaaagata
    13141 ctcttcccct gttaattgtt taatttcatc agcaagcgca ggacttgtaa gtggaccggt
    13201 cgcaataatt gttggacctt ctggaatagt agttacttct tccgtatgca ctgttacgag
    13261 tggatgattt ttcaccttgt ctgtaatata accagaaaat tcatgtcgat caaccgcaag
    13321 tgcccctcca gctggtacag atgctttgtc agcggcttca atgataatag aatcaagtat
    13381 ccgcatttct tctttaataa ctcctacagc attcgttaga ccgttagctc gcaaggaatt
    13441 cgtacatact agctctgcaa atttatctgt atgatgtgcc ggagtttgtt ttaccggtct
    13501 catttcgtat aaatccacct ttaccccacg ttttactaac tgccatgctg cttcacttcc
    13561 tgctaaacct gctccaatta cattaacact cttttccatt tgtccgcctc ctcgcgcaac
    13621 aatggcaaca caagaacgat ccaagtgttg ccattttccg attattgttg ggttgattct
    13681 ttgtaatcac aatttgtaca ttgtacttgt acaccttttt tcaatttctt ctcgactaat
    13741 gctcgtttct cacatttcgg acaagcccgt tcgaccggtt tatcccatga tacatagtca
    13801 caatctggat aacgatcaca accgtaaaaa atacgctttt tcttactttt tctttctatt
    13861 acatgtcctt tctcacattt cggacacgta acgccgattt ctttcacgat tgctttcgta
    13921 ttacgacaat caggaaatct gctacaagct aggaacttac cgtatttacc cattttgtaa
    13981 accattggag ctccacaaag atcacagtca attccggctg gttcatcttt aatctcgatt
    14041 ttttccattt ctgcatctgc ttttataaca tttggttcaa atcgtttata aaattcatca
    14101 atgactttca cccattcgac ttctccgtgc tctacttcat cgagctcact ttccatgttg
    14161 gcagtgaatt tgacatctaa aatttctggg aaatattctt caatcatttc attaacgatt
    14221 tcacctaatt cagttggaat aaagcgttta ttcgttaaag aaacataatt tctgcgctga
    14281 attgtgtcga gtgtcggcga ataagttgat ggtcgaccaa taccaatttc ttcgagcgtt
    14341 tttactaatc tagcttctgt gtaacgtgga ggtggctgtg tgaaatgttg ccgttgttcg
    14401 agtgattcgg actgtacctt atctcctttt ttcaaatctg gtaagatatt ttctttttct
    14461 tccgtattat catcgttact ttctacatag actttcatga agccgtgaaa tttaatttta
    14521 gatccatttg ctctgaagtt cacgccattg ttgtctaagt caacgcgcat tgtatcaaga
    14581 actgctggcg tcatttggct cgcgataaat ctttcccaaa tcaaacgata taagcgaagt
    14641 tggtcccgtg ttaaaaattc ttttacttct tgaggacttc tcattgcact tgtaggtctg
    14701 attgcttcat gggcatcttg agcaccttta gcatttttat ctgaacgttt atgattacga
    14761 gaaaattcgg gtccataggt ttctttaatg taattgcttg cttctagtat agcggaatcg
    14821 gcaatacgag tggagtctgt acgcatatac gtaattaagc cgactgtccc ttgtttacca
    14881 agtgtaattc cttcatacaa ttgttgggca agcatcattg tttttcttgt acgataattt
    14941 agttttcgag ctgcttcttg ttgcaaactt gaagtagtga atggtgcagc tggatttcta
    15001 agtctttctt ttttcgttac atctgttacg tcaaatgatt ttccttttat tgcagacatt
    15061 acttctttta catcatctgc agtggaaagc tttttctttt taccatttac accataaaaa
    15121 ttggcttgga attttttctt ccctttaagg aagttaccgt caattgtcca gtattcttca
    15181 ggtttgaaat tattgatttc tttttctcta tcaataatga ttcgaagtgc gatagactga
    15241 acacgccccg cactcaaacc tttcttcact tttttccata gaataggact gatattatat
    15301 ccaactaaac ggtccaaaat tctgcgtgct tgttgcgcat tgactaaatc catgtcaatt
    15361 ttacgtggtg ttttgaaaga ttcttttact gcttccttcg ttatttcgtt aaatactaca
    15421 cgtagtttgt ctgattgatc taactctagg ctattggcta agtgccatgc aattgcttct
    15481 ccttcgcggt ctggatcggc tgcgagatag acttttttcg cttttttggc tgcttgtttt
    15541 aattctttta aaacagggcc ttttccgcga atcgtaatat aacgaggttc gtagtcatgc
    15601 tctgtgtcta cacccatttg actcttaggt aagtcacgaa catgtcccat tgaggctttc
    15661 actttaaatt tcttacctaa atacttttca attgtttttg cttttgcagg tgactctaca
    15721 atcactaaat aatctgccat atctattata ttcctccctg atttgggtca atacacgggc
    15781 tttactcgtt gtcttaatcc tattacagtc ttagcctcgc gttcaataag ttttcaatgc
    15841 tgattgttca cataattcag tagtaaatat tagcccttcc tactgggttt gtcaatggct
    15901 tttatgaaaa agtccatttt ttgatgtttt atatcagctt tctttagcaa acttatctca
    15961 aaaaatcagg aaatgcaagt caaatcactt aaaaaagata atttcagtat atttatggct
    16021 taatttgaat aaattcttct attatattgt tcgaattcat aactaacttg gcaccttctt
    16081 gaattaaata gttcgtcccc tgccatgtat caataaaaat atttcctgga acagcaaaaa
    16141 cttgtctgtt ttgttctaaa gctatatcag cagtaatcaa cgaaccgctt ctttcggcag
    16201 cttctattat tactgttcct atagccaagc cgctaataat tcgatttctt tctggaaaat
    16261 gccatctttt cgcttcttca tcgggtaaat actcacttaa taacaaacct tctttgacaa
    16321 tttctttcgc tagaagttca tttttctttg gataaacttt gttgacacct gaacctagta
    16381 ctgcaatcgt tgtaccttgt ttatttaaag tggctctatg ggctgtagag tcgattccga
    16441 tagccatccc gctaactata gtcagcttat tctcagcaag ttcactagca attttcatac
    16501 aagctttcct accatattca ctcatctgcc ttgtaccaac gatggcaatt gcttgttgtt
    16561 gtaataaatc aatatttcct ttacaaaata aaattggcgg cgcttcataa atttctctta
    16621 aaagcgctgg ataggcatca tctaaaatcc atattaaggt aacatcatca aaaaagcacg
    16681 cttctgctgt ctctagctcc attagaatct gtgcgagttt atccacagga aagaaagatt
    16741 ctgcaaatgt ttgtgttgtc atttcatact ggtcgaattc tgttaatttt tgccaaatgc
    16801 tggctctttt tttagcagaa atagacttac aagaagcaat tttgagccat gtatgtcgtt
    16861 gtttaaaatc catctgttgc acctccctaa tagttactcc cagtgtacaa acattgggct
    16921 tttttgtaaa atgaccaaaa cctataaaac ggcataaaaa aacgtatttt ccatgttgaa
    16981 aatacgtttt tctctatatg atttagttat tttaaactat caaaatgcaa ctttgcttct
    17041 tttacaggcg caaaacttat acgatggata ggacatatac caattgtatc taaaccaagt
    17101 aaatgttttt ttgtgccgta gcccatattg tttgcaaaat catacccggg atacttttca
    17161 tcgtacatct gcattaatct atctcttgtt acctttgcga tgatagacgc tgcagcaatc
    17221 gaaatgcttt ttgtatcccc tttgataaga gatagttctg cctcggtata tcttagtggc
    17281 attgcatcta ttagaacaaa atcaggttct ggtgttaatt gatctaacgc ttcacgcata
    17341 gcaagtttcg ttgcctcata aatatttact tgatcaatta catcatgttc tataatccct
    17401 actccgatag caattgcttc tttttttatc gtttcaaaca aagcatcacg ttttgcttca
    17461 ctcaattgtt tagaatcatt tattccgaca acagaaaaat cagctggtaa aatgacggct
    17521 gctgctacaa ctggtcctgc gagaggccca cgtcccactt catccactcc agcgatatac
    17581 ttgtatcctt gttggaataa atctgtttca tattgtttca tttcttcaag cttgttccgt
    17641 aattgcgctt ctttttccca ttttctcctt gtagtttcca gaagtttttc tacaccttta
    17701 cgctcatctt gcatgcattt ccgaaaaaag ggatcatgtt ctgatgtgac ttggtttagt
    17761 ttttctcgga taacggatat ggaatcgctc attcgacttc atcttcccaa tttgggaaat
    17821 caaacgacat tctccctaac ttttgctgac gaatttctcg aactaccgtt tcggctgcgc
    17881 gagaataatc tggatcattg tatcgatcta gaagccctct tttttcagca ataaaagcaa
    17941 gtgtttcgat aggatcttca gagactgtct ctactttcag ccagttttga agtctgtcgg
    18001 gataatgttt ttctaaaaag cgcaaaccgt aaccagcgat ttcttccatt tgtagtaaat
    18061 catctttaat tgcaccagta agagctaatt tgtagccaat ttcttgatct tcaaatttag
    18121 gccaaagaat ccctggtgta tccagaagtt ctaatgtttt tcccacttta atccattgct
    18181 gtgctttagt tacaccaggt ttattacctg tccgtgcaat attttttttc gctagtcgat
    18241 tgattaatgt tgatttacca acattcggaa tacctaaaat catcgcacga attgctcttg
    18301 gcttcatacc tttacttctt aaacggtcga atttttcagc cattaatttt tcggcggctt
    18361 gttctatttt gaatagtcct ttaccttctt gagcattcac agcaactgct ggcaagcctt
    18421 tctcagcaaa gtagtcaatc cattcttttg ttgttttttc atcggcagta tctgctttat
    18481 ttaaaataat cactcgtctt ttttggtgga taatttcttc tagcatggga ttagaggaag
    18541 agagcgggat acgcgcatct accaattcaa aaatcacatc tactagtttt aatttttctg
    18601 ttacctcacg gcgagctttg gccatatgac ctggaaacca ctgaattgtc attatatact
    18661 cctaatctat aagtttggca tcttcaatcg gccagtaaca aatcggtgtt gttcctaaca
    18721 ccttgctaaa tggaattggc ccaattatcc gactgtcttt gcttgctctt cgattgtcac
    18781 ctaaaacaaa ataagtatct tttggaattt tgccaccatc tagttgatct ttcgaactgt
    18841 aatcatctgt taaatagcca tcttttaact tttctttgta agtatccaaa tatggttcat
    18901 tatacttttt accattgatg taaagttggt cttctttgta ttctactgta tcacccggca
    18961 aaccgatcac tcgcttgatg tattcttttc catctgattc tcggaaaaca atcacatcga
    19021 aacgatctac atttccgaag cgatttataa ttacacggtc atcgctatga agtgtaggca
    19081 tcattgatat cccatcgacg agaataggga caaataaata aaaacggatt ataacagcta
    19141 ttaacactgc tagaacagcc gcccaaatcc atgaccataa ccgttttaaa ttcttctcct
    19201 tcaaaaaatc gcaccgccct attttatact aacagtctta ttataaacga aaaaacgctc
    19261 atttaataga gaaatccgcg aaaaagtatc ttcacggact tcacattatt ttccaaattg
    19321 tatcactgta ccgtttacca tggaatcatc aataaatccg aaaacgcgac tatctgaact
    19381 cccgccgcga ttatctccaa gtacaaatag tttccctttc ggaacagtac tttcgcctgt
    19441 catatcctcc agcgtataat ccgctatgta tggtttttgc gttggatctg gattccaaag
    19501 ggttaatgtt ccttctggca agtaattttc tacttttcgt tttccattta aatataattc
    19561 accgttttta aatgctattt tatctcccgg caaaccaatc actcgcttga tgaaatgctc
    19621 tcctgaacca atcattggag gttcatcaaa cacaataatg tcgaaacgat caggcttgga
    19681 aattttttca atgaaaattc tatcgccatc ttgatatgtt ggaaccatag atgttccttc
    19741 tacttttact ggtgcaacta caaagttacg aatcacaagt gcaattgcaa gcgctgcaac
    19801 gataactagc acccagctta ataattggtg cgccccgctt tttttcttgg gctttttgtc
    19861 atattgatct gtcatctatg tctcctccta gacttcctgt agggtcacat taacgttcta
    19921 aggattttcc aaatgaaatt acttttccaa gcacggtatc ctgtgatata aagccaatgt
    19981 agcgactatc tttacttact tgacgattat ctcctaaaac aaaaagttct cctttaggga
    20041 cagtgagaga gccgtcagag tttggaatgt ctgccatcgt aaaattagga tcgccttctg
    20101 catcagtggt taaataaccg ttttttagag cttctttttc tgaatctaaa taaggttcat
    20161 catatttttt tccattaata taaagttgat cttctttgta ctccacttta tctcctggaa
    20221 ggccaatgac gcgtttaatg tactctgcat tttcctcatc aggcgcagga aatacaataa
    20281 tgtcaaaacg cttcggatct gataccttgt taataaataa atgttcccca tcatgaagtg
    20341 ttgggtccat tgatttccca ttaacagtaa ctggagaaat taaaaaatag cgaataccaa
    20401 aagcaagtat aagcgcgatg agaattattt ttatccatcc aaatgcccca gaaaaaaatt
    20461 tgttttcact tttcatgtct ttttatcctc tccaattaat attaataaag tatagcacga
    20521 aacaagtcag atattacagt aaaacaagct ggtttgatag aaaaaatgcg cgccaattac
    20581 gacgcgcatt ctaatcatgc agatgtttta attggaataa tagaaccatc ttctaattgc
    20641 agttgcggtt cttcttcacc acgagctgct ttttcagtaa ttatacactt cgtaatgtca
    20701 tcacgagaag gaatttcgaa catcacttca agcataatct gttcgataat cgaacgaaga
    20761 ccacgcgctc cggttttgcg ttcaatcgct tctttcgcaa tttcaattag agcagttggt
    20821 tcgaattcaa gttctacatc atcaagctct aacatacgtt tgtattgttt tactaaagca
    20881 ttcttcggtt ctgtcaaaat ggaaacaagc gcagcttcat ctaattgttc aagcgttgct
    20941 ataaccggta aacggccgat aaattcagga attaaaccga atttcagtaa atcttctgga
    21001 acaacgcgag ataaataagt ttcatcatct tttagtttcg cattatctgt gccaaagcca
    21061 atgacttttt cacccattcg atttttaacg atttgttcga ttccatcaaa agctccacca
    21121 acgataaata gaatatttcc tgtatcaatt tgaattaact cttgatgagg atgttttcta
    21181 ccgccttgag gaggaacgct tgcgacagta ccttccaaaa ttttcagtag cgcttgttgt
    21241 acgccttcac cggaaacgtc tctagtaata gatgggtttt cggatttgcg agcaactttg
    21301 tcaatttcgt caatatagat aatacctttt tcggcttttt ccacatcgta atctgctgat
    21361 tgaatcagtt taagaagaat attttctaca tcttccccaa cgtaaccagc ttctgtaagt
    21421 gaagtcgcat ctgcaatagc aaatggaaca ttgagaattc gcgctaatgt ttgagcaaga
    21481 agtgttttac cactaccagt tggaccaatt agacaaatgt tacttttcga aagttctact
    21541 tcatcttctt tcgtttcatt ggaattaata cgtttgtagt gattgtaaac tgctacagca
    21601 agtgcttttt tagcacgttc ttgaccaata acatagtcac ttaatatatg acggatttct
    21661 tgaggttttg gtacttcacc aaaatcaaca aattcagaaa tacctagctc ttcttcaata
    21721 atttcattac aaagctcgat acattcatca caaatataaa cacctggacc ggccactaat
    21781 ttacgtactt gatcttgagt ctttccgcaa aaggagcatt taagttggcc tttttcgtcg
    21841 ttaaatttaa acaaaatatt tcaccccttc gcataggtat gttgcttata ggcgattttt
    21901 tcatctccta tgtgtgttaa taatatcatt tgtttattag aaatgccaat catctgtatt
    21961 catatttcta cattcagaag gacacgagta taactcatgc cccccatttt ttaatgaaat
    22021 tattaaatca gtcgtagctt atttttccac tgcactatct aataaaacgt cgatagcttt
    22081 gcggatttta agatcagatt taagttcgct catatcgcca agtgcagcac gaactgcgtc
    22141 tttttccata ccatattttt cagctaatgt agaaatttct tcgtcaatag cttcttccgt
    22201 tggctcaatg ttttcagctt ccgcaattgc ttcaagcact aagttcattt tcacgcgttt
    22261 ttcagcgtct ttttccattt gtgcgtgcat agcttcttct gtttggccag tgaattggta
    22321 atataattca ggagttagac cttgtgcttg taaatcttgt gcaaagtgat tcattaaatg
    22381 atcagcttca tggtgaacca ttgcgtgtgg aatgtccact tctgcatttt caacagcttt
    22441 cgcaataact tcttcttgtt tagcttgagc aacagattct tcttttgctt cttgtaaacg
    22501 tttagagatt ttttctttta attcatctaa agtttctact tcttcgtcga tgtcttttgc
    22561 aagctcatcg tcaagagctg gaacttcttt tgttttgatt tcgtgtaatt tcactttgaa
    22621 aactacaggt tgtccagcta aatcttccgc atgatattct tccgggaaag ttagctcgat
    22681 atccgcttcg tcgccagctt ttaagccaac taatttttct tcaaaaccag gaatgaattg
    22741 tccgcttcca agttctagag aatgattttc agcttgtcca ccttcgaaag ctacgccgtc
    22801 tttaaatcct tcaaaatcaa ggataacagt gtcaccgttt tcagctggtg catcttcttt
    22861 aacaactaat tcagcttgac gctcttgtaa ttgttttaat tccgcttcta attcttctgt
    22921 tgtaagttct gtttcacgtt tttctacttc aagacctttg taatctccaa gtttcacttc
    22981 aggttttaca gtaacttctg ctgttaaaac ccaagtttcg cctttttcca tagactcaat
    23041 gtttacttga ggagtatcca ctggatcaat accagcttcg tcaattgctg cagaatatac
    23101 ttctggaagc aagatatcaa gcgcatcttg gaaaagagct tcttcaccaa aacgttgatt
    23161 gaaaatttga cgtggaactt tccctttacg gaagccaggc acattaagag ttttacgcac
    23221 ttttacgaaa gctctatcta aaccttcttt tactttttct tgttcaattt caaaagtaag
    23281 ttttccaaca ttaccttctt gtttttccca ttttactgac atggtataat tccctccatc
    23341 atctatttag ttcaatttaa ttactctcat gacaagtttc agccatactc actaataata
    23401 acacagatat ccctgacttg aaaacaagaa atatcattat ataaaataat tttgctgcct
    23461 aatttctaac tcttcaataa tggaaatagc ttcttctact gctaagtgat tcacatcatc
    23521 cgaaataaca caataattac cgtacattgc attcgcccat ttatagtatg cgtttatcca
    23581 aacatctact tcttgaggct ctaattcaaa tggataaagc ataaatagat gttgctgaat
    23641 aataccaatc acttgctcta aaagacttgg attactatgt tcgagcatct cagcgagtcc
    23701 agcaaaaata gcttccgcaa atttgttatc agcaagcatt ggcacaagac ttggattaaa
    23761 aataccgtgc ttatctattt tttgaactgt aatatcttca tttatttctt tttcttgcat
    23821 taattcgaaa atcatcgact gaacaaacgg ggaaaaacta tcatccgcta gaaaagcttt
    23881 aaaagctggc aaaaatgaat ctatttctaa gaaacgagct tcttgtaaaa actccaattg
    23941 ttccgtcgta tgccaagacg caaattcacg aatgtctctt cttgggacaa actgtttggg
    24001 aaaaggaata acattgtcag ctatttcttc cgttgcttct tttttttctt cttccatata
    24061 atgcctaact aatgtgaagt acgtatccat attatcttct ttcataaatg ttacagatag
    24121 ctctccaaga atttccttat catagccatt catcgtcaaa aagttttgtc caatttcttg
    24181 cgctttcttc gttttatctg tctgattata aaattgaatt aatctatgta caatttcctc
    24241 gttgcaaggc tcttgatgat acgcattctc caaataatgt agcgtactca ttttttcttc
    24301 ttcggacaac gaggtaatcc ctttttccag aaatttttta acactcattg gaaaaaaagc
    24361 accacttcca ctcatcgttt tatctccttt tagttgaaaa agctttattt atactaactg
    24421 gatttaccct tattgttaaa aatctaacca tttctagcaa aaatgttgat ttggtttgat
    24481 tcattctact tgtatagtct ggttctgtca agaggctttt atggtgtttt atcacgaaaa
    24541 actgtctaga ttaaacttca ttttttatca aatttttatt tcaaaaaaat tagacctcga
    24601 tttttacacc gaggtcttac gggcgtttaa acttttttat tcaccgaatt cttccaaaac
    24661 ttcttgatag acctcctgat aaatttcttc aatgctatct gtttcttccg ttgtttgccc
    24721 tccatctaag aacaattctt cttcaggtaa ttcttccact gggaatttac ttataactgc
    24781 atttgatagt atataatttt caccatctgg atttttttct aagaaaagtg tatattcttc
    24841 tcccttttcc atattttt
//
LOCUS       DASDYK010000032        24671 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.032, whole genome shotgun sequence.
ACCESSION   DASDYK010000032 DASDYK010000000
VERSION     DASDYK010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 24671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24671
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.032"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..481
                     /locus_tag="U0308_001288"
     CDS             <1..481
                     /locus_tag="U0308_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Rgg/GadR/MutR family transcriptional regulator"
                     /protein_id="HEM2316257.1"
                     /translation="LSEADELFWNDILILRNIFFIFENETAQHIVNRLISQLKKYRYL
                     YPTLSIEISLHVNRATYLILDEEYELALHYIELSIKIAKHNHYYLQFCMAIAKKGIVL
                     YKLGQKQKGKHFMQRALRVAKVLEEERILNGIKNEIDYFLHDELQNLSLNEFTKIDI"
     gene            complement(537..1001)
                     /gene="smpB"
                     /locus_tag="U0308_001289"
     CDS             complement(537..1001)
                     /gene="smpB"
                     /locus_tag="U0308_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEM2316258.1"
                     /translation="MPKGDGKLVAQNKKARHDYAIEETFEAGIVLQGTEIKSVRNARV
                     NLKDSYARIDKGEIFLHNMHISPYEQGNRYNHDPLRTRKLLLHKKQISRLIGETKESG
                     YSIVPLKMYIKDGYAKVLIGVARGKKKYDKRQDLKQKEAKRDIERAFKERQQ"
     gene            complement(1017..3398)
                     /gene="rnr"
                     /locus_tag="U0308_001290"
     CDS             complement(1017..3398)
                     /gene="rnr"
                     /locus_tag="U0308_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEM2316259.1"
                     /translation="MEQKQMEEKIMNLLTSAPDKTFALEDLEIEIALNNADDFKLMVK
                     ALVKLEDSGTIVRSRKNRYALPEKMDLVKGTFRAHERGFGFVLPEEKEMDDIFIPPNE
                     VKDAMNGDLVFATITKRKGDNLAEGTIKKIVERKTTQIVGTYMEDLAGTPIVMPDDKR
                     LFGEVEIDLEDGLKPVDGHKVIVELTEYATGHARARGVVKSIIGHRNDPGVDILSIIH
                     KHGISIGFPEEVMEQVSKAPDVVDDSDIGNRRDLRDQMIITIDGADAKDLDDAVTVKQ
                     LPNGNWKLGVHIADVTHYVTEGSPLDVEAQERGTSVYLVDRVIPMLPHKLSNGICSLN
                     PQVDRFTMSCEMEIDEEGHVVNHEIFESIIKTTERMTYTDVNDILVEKDEALREKYAP
                     IVPMLEKMQDLAEILRRKREKRGAIDFDFKEARVVVDEDGHPEAVVMRERSAGEHLIE
                     EFMLAANETVAEHFHWMDVPFIYRIHEDPKEDKLARFFEFITNFGLIVKGTANDIHPA
                     ALQQVLEEVKGKPEEMVVSTVMLRSMQQAKYDTVSAGHFGLSTDFYTHFTSPIRRYPD
                     LIVHRLIREYLINGDVRPETLEKRAEELPEIAEHSSKMERRAVEAERETDELKKTEFM
                     VDKVGERFIGIISSVTNFGLFIELPTTIEGLVHVSAMKGDYFKFHQNQLAMIGERTGQ
                     IYRIGDEVEVEVTKVDVDAREIDFALRSEGKPGPVSDKQKRQREKPIDKTRNFKSNQK
                     KGRNKRRAGKSEDVKPKSERKEDEWHTKPKKKKKKKPFYQGVAKESPKKKKRR"
     gene            complement(3432..4178)
                     /locus_tag="U0308_001291"
     CDS             complement(3432..4178)
                     /locus_tag="U0308_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="HEM2316260.1"
                     /translation="MKITPPQPFLFEKGKRAVLLLHGFTGSSADVRILGRFLQENNYT
                     CYAPQYRGHGVSPDLLLKTGPNDWWEDVLEAYDHLKSLGYTEIAVAGLSLGGLFSLKL
                     GFSRPLKGIIAMSTPTRMDSSSPIIQGFLDYVRNYKKLEGKTPEQIDAEMVAYKDAPM
                     NTIAKLKDEINGVVAEIDMIYAPIMVVQGEKDDMVDVSGAQLIYDTVESTKKELHWFK
                     ESGHVITLDKERKEVNQAILTFLDSLDWQE"
     gene            complement(4434..4667)
                     /gene="secG"
                     /locus_tag="U0308_001292"
     CDS             complement(4434..4667)
                     /gene="secG"
                     /locus_tag="U0308_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEM2316261.1"
                     /translation="MSTVLTVLLIIVSVLLITVIILQPGKSAGLSGAISGGAEQLFGK
                     QKARGLELILHRTTIVLSVVFFAILIALAYFVQ"
     gene            complement(4757..5500)
                     /locus_tag="U0308_001293"
     CDS             complement(4757..5500)
                     /locus_tag="U0308_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="HEM2316262.1"
                     /translation="MSADRSFTLKAGNRAVLLLHGFAGTTEDVRELGEILAENGYTVH
                     APNFRGHGDEPAIFLKTTPEMWYEDAVAGYRQLEKDGYNEIAIVGVAMGGVFALKMAE
                     SFSPKAIVPLCANVNRKMRYIPIENYLTKQLKKQGIVEQEADQMLKNYLPEIDVMTEA
                     RATFYKNVARDIEKIHVPTMIGQGCQDEEIDADNANYIFKHIHTNDKQLCFYAGSGHD
                     IVNDCEKDILEEDLIYFLDDLVWLEEKVV"
     gene            complement(5683..6402)
                     /locus_tag="U0308_001294"
     CDS             complement(5683..6402)
                     /locus_tag="U0308_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2316263.1"
                     /translation="MIAEINGINLFYQIIGKGEPILLIHGNGQNHRSLKRMIDDLSTN
                     HQVIAVDSRAHGKSEAGNTPLDFEVMALDMLSLLDYLKIDKYKVIGYSDGGIVALVMG
                     KLQPNRQIASVVIGTNYHVNQIRFLPDLFCRVAYGAAFLLAPFSRFFERMKRQLALTI
                     YHPHMSEADLQKISAPLLAVVGEYDLISSKDTKKMVHSVQHGEMVIVRNGLHYLPRQK
                     PKQLLQLIHSFFSNLSAEIHK"
     gene            complement(6535..6708)
                     /locus_tag="U0308_001295"
     CDS             complement(6535..6708)
                     /locus_tag="U0308_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316264.1"
                     /translation="MLMKVKNSQASKVLETPKIKDAVVHEKSHPLAEKHSVQKKIINA
                     DMPQQQFHRRLMK"
     gene            complement(6811..8103)
                     /gene="eno"
                     /locus_tag="U0308_001296"
     CDS             complement(6811..8103)
                     /gene="eno"
                     /locus_tag="U0308_001296"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEM2316265.1"
                     /translation="MSIITEVYAREVLDSRGNPTVEVEVYTEAGAFGRALVPSGASTG
                     EYEAVELRDGDKARYLGKGVLKAVENVNDIIADKIIGFDVTDQIGIDKAMIELDGTPN
                     KGKLGANAILGVSLAAARAAADELGVHLYEYLGGVNGKVLPVPMMNILNGGEHADNNV
                     DVQEFMVMPVGAPNFKEALRMGAEILHALKAVLKGKGLNTGVGDEGGFAPNLKSNEEA
                     LETIMQAIKDAGYKPGEEVKLAMDAASSEFYNRETGKYELKGEGVTRTSEEMVTWYEE
                     MITKYPIISIEDGLDENDWDGFKLLTERIGDRVQLVGDDLFVTNTTKLKEGIEKGIAN
                     SILIKVNQIGTLTETLDAIEMAKRAGYTAVISHRSGETEDSTIADIAVATNAGQIKTG
                     APTRTDRVAKYNQLLRIEDNLADLAEYHGNETFYNLKK"
     gene            complement(8239..9771)
                     /locus_tag="U0308_001297"
     CDS             complement(8239..9771)
                     /locus_tag="U0308_001297"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEM2316266.1"
                     /translation="MSKSPVAIIILDGFGKRAETVGNAVAQANKPNFDRYWANFPHGE
                     LKAAGLDVGLPEGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEFQENKALNNAFT
                     HTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSS
                     LEYLETLQKAISDLNYGAIATVSGRFYAMDRDKRWERVEKAYKAIVNAEGEKFEDPIE
                     LVKASYANDKNDEFVVPAIITKDGKPVATVKDNDAVIFFNFRPDRAIQLSNAFTDKEW
                     DHFDRGANHPKNIKFVTMTLYNPSIDAEVAFEPIEMKNVIGEVLSNEGLSQLRIAETE
                     KYPHVTFFMNGGRNEEFPGENRILINSPKVETYDLQPEMSAYEVTDALVEDIKNDKHD
                     AIILNFANPDMVGHSGMLEPTIKAIEAVDENLGRVVDLILEKGGSAIIFADHGNSETM
                     STPEGKPHTAHTTVPVPVIVTKKGVTLREGGRLADVAPTMLDLLGVKKPAEMTGESLI
                     QK"
     gene            complement(9773..11764)
                     /locus_tag="U0308_001298"
                     /pseudo
     CDS             complement(9773..11764)
                     /locus_tag="U0308_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004081072.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
     gene            complement(11899..12909)
                     /gene="gap"
                     /locus_tag="U0308_001299"
     CDS             complement(11899..12909)
                     /gene="gap"
                     /locus_tag="U0308_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEM2316267.1"
                     /translation="MTVKVGINGFGRIGRLAFRRIQNVEGIEVVAINDLTDAKMLAHL
                     LKYDTTQGRFDGEVEVHDGFFNVNGKEVKVLANRNPEELPWGDLGVDIVLECTGFFTA
                     QDKAELHIKAGAKKVVISAPATGDMKTIVYNVNHETLDGTETVISGASCTTNCLAPMA
                     KVLEDKFGVVEGLMTTIHAYTGDQNTLDAPHPKGDFRRARAAAENIIPNTTGAAKAIG
                     EVLPTLKGKLDGAAQRVPVPTGSLTELVTVLDKKVTVDEVNAAMEAASDPETFGYTSD
                     QVVSSDIKGMTFGSLFDETQTKVLTVGDQQLVKTVAWYDNEMSYTAQLVRTLEYFAKI
                     AK"
     gene            complement(12942..13988)
                     /locus_tag="U0308_001300"
     CDS             complement(12942..13988)
                     /locus_tag="U0308_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HEM2316268.1"
                     /translation="MSDLINIQKKLLPDVLMIMQKRYQILRSIYFSEPVGRRTLAGML
                     GMSERVLRGEVEFLKAQGLVEIASSGMTVTKEGLVVFRDLENVMNQLSGLHSMEEQLA
                     KKLQIKKCLVVQGDSDDTPWVREEMGRVAVEQLDMALTEKRNIVAVMGGSTMATVAEM
                     MTTDFAKGRELLFVPGRGGIGEDLDNQANTICDKMATKTNTKHRVLYVPEQLGEEAYR
                     SLLKEPAIQEGLRLVQSANAIILGIGDALAMAKRRHTGEDVLEKIIRRKAVGEAFGYY
                     FDEQGEVVHKVPTFGLQFEDLAQIPHIIAVAGGTSKAKAIKSYMKSAPKNTILITDEG
                     AAKSLLKGSNTLLK"
     gene            complement(14429..15772)
                     /locus_tag="U0308_001301"
     CDS             complement(14429..15772)
                     /locus_tag="U0308_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEM2316269.1"
                     /translation="MRLESNFVQKQQQKQSQKLNMTQQLSQSIAMLQFATADLVAFLE
                     DKALENPLIEVIPGSDFATDFSYSSRKSAGSSDDTDWLEQIADNKLTLADALKEQLHL
                     MDVTQTQKIIVLYLIESLNDNGYLQIDLKDVSAALLMDDSSVLEGLEILQSMEPAGVG
                     ARDARECILLQIERSPDAPYIAYDVIQKFFTEFAEKKWKKIAAEMDVSLQDIQEVSDY
                     IQTLNPKPGSEFESERVQYVVPDLILLQHEDEFAVSLAKQFLPQVRFQEAYYETMRAT
                     EEKDVAQFLREKAGEFDWIKKGIEQRENTLQRVGEAIVNHQKAYFLDNSAHLQPLTLK
                     EVAEELGVHESTVSRAVNGKYMETTNGVYELKRFFASGLQKKSSENENTGDISSTTIK
                     KLVQEFVAAEDKLKPLSDQKIVDMLAEKEIQVSRRAIAKYRLELNIPSSSKRKRF"
     gene            complement(15932..16858)
                     /locus_tag="U0308_001302"
     CDS             complement(15932..16858)
                     /locus_tag="U0308_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEM2316270.1"
                     /translation="MRVIDTHCDALYKLQAGKGKYTFQDAEELDVNFERLIEAKMLLQ
                     GFAIFLDEDIPVEHKWKKAVEQVNIFKQHVLHKGGIIHHVKKWCDLENLPEDKIGAML
                     TLEGIEPIGRDLDKLTQLLDGGVLSVGLTWNNANLAADGIMEERGAGLTRFGKDIIHL
                     LNERKVFTDVSHLSVKAFWETLEQAEFVIASHSNAKAICSHPRNLDDEQIKAMIEHDA
                     MIHVVFYPLFTTNNGVADTEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKGLEHVG
                     KYQSFLETLEKHYTKEEIEGFASRNFLNHLPK"
     gene            complement(16937..19099)
                     /locus_tag="U0308_001303"
     CDS             complement(16937..19099)
                     /locus_tag="U0308_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEM2316271.1"
                     /translation="MKDGFLSKIASGVGGKKGRFITLGIWIIAIIILQFFFPKAADYK
                     DDAAKDLPNSEPSVVAQKLIDDKFAGTDGVPALITWYRSTGLTTEDLVNIQKYSKELT
                     ENPVDYQKMAVPYDKMPPVALKQQVSKDGTTFIQTVIMKDSATSDQLTESFKQLESAA
                     KTTIGENPFAQKVSADDALVARTTGPAGISVDASGLFKDADVSLLIGTVLLVLVFLLV
                     IYRSPILALIPLIAVGFAYLVITPILGLLAKEGIITYGSQGLSIMTVLLFGAGTDYCL
                     FLISRFRSHLHTEKNRFQAFKEAFSGTAGAIALSGLTVMAALLLLLAAEYGSFHNFAV
                     PFSLAIFIMMISSLTLVPALLGIFGRVSFWPFVPRTLEMEETRAKKKGKTPKHHKENR
                     FWHKIGEMSAKHPVRILIITLIILIGCGIFTTQVKYTYDTLSTFPEDMPSREGFTLIS
                     DHFGAGMLAPMEVVVNSKESMKSSLENVDGVASVTGPERSKGYQKYTLILKDNPYSNE
                     AMDVVPKVRAAADKGNDVYIAGQTATQYDDRAVTEHDEKVIIPLVIALIAILLLCYLR
                     SITAMLYLVATVLLSFVGALGLGWVIIHYAMGVEAISGLIPLYAFVFIVALGEDYNIF
                     MISSIWKNSKKMPLRKAITEGVGQTGGVITSAGLILAGTFGVLTTLPIQLLVQFGLIT
                     AIGVLLDTFIVRPFLVPSITVLLGKWAFWPGKQHKMTK"
     gene            complement(19179..19787)
                     /locus_tag="U0308_001304"
     CDS             complement(19179..19787)
                     /locus_tag="U0308_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2316272.1"
                     /translation="MEKKRTRAEELGITRRKILNTARDLFMEKGYRAVSTREIAKIAN
                     ITQPALYHHFEDKESLYIEVVRELTQNIQVEMHPIMQVTKAKEEQLHDMLIMLIEEHP
                     TNILLMIHDILNEMKPENQFLLYKLWQKTYLEPFQLFFERLENAGELRDGVSAETAAR
                     YCLSTISPLFSGKGSFAQKQTTTEQIDELINLMMFGICKKEV"
     gene            complement(19804..20202)
                     /locus_tag="U0308_001305"
     CDS             complement(19804..20202)
                     /locus_tag="U0308_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316273.1"
                     /translation="MAASLKDRLEKEVRTYSADNNLTVQTIDFLYAGPHMRGRHSLIL
                     AFTEAGIFTFVFKLSDAEMHFLDGETVQQIALEKKKLVYRLYIRAVTEEGELEEGKYL
                     VSKRVLGRKWHKETLEKLINKNLPLLTATK"
     gene            20435..20770
                     /locus_tag="U0308_001306"
     CDS             20435..20770
                     /locus_tag="U0308_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003739727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316274.1"
                     /translation="MGELGNIETRNGRTSFFDGGLLQYIGWTILGTLVTICTIGICYP
                     WALCMVYGWKINHTVIEGRRLKFQGSAVGLFGHWIKWLFLTIITIGIYGFWVFIKLED
                     WKVKNTIFK"
     gene            complement(20827..20898)
                     /locus_tag="U0308_001307"
     tRNA            complement(20827..20898)
                     /locus_tag="U0308_001307"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(20863..20865),aa:Arg,seq:ccg)
     gene            complement(21018..22454)
                     /locus_tag="U0308_001308"
     CDS             complement(21018..22454)
                     /locus_tag="U0308_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic polysaccharide monooxygenase"
                     /protein_id="HEM2316275.1"
                     /translation="MKKMTKIGMFFAVFTLAVVLFQTTASAHGYISKPASRVYLANKG
                     INVGVGSAQYEPQSVEAPKGFPASGPADGSIAGGGKYSLLDAQTANRWAKVDIQSGPL
                     TVEWTLTAPHRTSSWQYFITKKGWDPNKPLTRASLEPLTTIEADGSVPNALTKQEINI
                     PDDRSGYYVILGVWNIADTGNAFYQVIDANIINSSVAPAVDNEAPTEPTNLAATTTAK
                     NVSLTWTVSTDNVGIKGYEILRDGVVLGESQTASYEDTAVESNTAYTYTVRAKDFAGN
                     KSTLSDSIDVTTKEAPAVDNEAPTAPKSLMSHGQTETTIALCWQASTDNVEVKNYEIY
                     RNNTKIATSTKTMFEDTKLASNKSYNYKVYAVDTSGNRSLVSNEITIKTKPLDPLNTW
                     KSDQIYHAGDQVYYNGVAYTAKWWTKGNTPDTSDVWQTASRDIQIWNAQKAYNGGDKV
                     TYNGKTYQAKWWVRGEKPDSSSIWTLLN"
     gene            22611..23207
                     /gene="clpP"
                     /locus_tag="U0308_001309"
     CDS             22611..23207
                     /gene="clpP"
                     /locus_tag="U0308_001309"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEM2316276.1"
                     /translation="MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSI
                     VSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSF
                     LLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQ
                     PYEVIARDTDRDNFMTAQEAKDYGLIDDIIINKSGLKG"
     gene            complement(23256..24647)
                     /locus_tag="U0308_001310"
     CDS             complement(23256..24647)
                     /locus_tag="U0308_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEM2316277.1"
                     /translation="MTKVNSFFRKKSFHNPATDKHHLNKTLGAFDLTMLGVGAVVGGG
                     IFILPGQVASVIAGPGIIISFIIAGIACCLAALCYSEFASKLPVAGSAYTYSYHVFGE
                     GVAWILGWSLILEYGLAVAAIASGWSSYMKSLLAGFDLHIPTVISSAYDPSAGTYFDL
                     LAFVVVMVIGILLSFGIRESTRVNNIMVLVKIAVVVLFILVGAFYVKPDNWTPFLPFG
                     VQGVITGASTVFFAYIGFDAVSSAAEEVKNPQKNMPIGIISSLAICTLLYILLSAVLT
                     GVVPYTDLVDVSAPVAFALQAINQNWIAGLLSVGAIVGMTTVVLVMSYGGTRLLFAMG
                     RDGLLPKSFSKISKNDTPVRNTMIFATVMGLIASTVPMADLAQLINIGTLFAFAMVSI
                     GIFFLRRNPDLNQKGFRTPFYPVVPALSFLLCVYLMINLSKTTWIAFGIWFVIGILVY
                     TFYGRKHSALRVK"
BASE COUNT         6897 a         5209 c         4375 g         8190 t
ORIGIN      
        1 actttcggaa gcggatgaat tattttggaa tgacatatta attttaagaa atattttctt
       61 tatttttgaa aatgaaaccg ctcaacatat tgtaaatcgc cttatctctc aacttaaaaa
      121 atatcgttac ctatatccaa ccctttcgat tgagatttca cttcatgtta atcgtgctac
      181 ttatttaatt ttagacgaag aatatgaact agctttgcac tacattgaat tatctataaa
      241 aatcgctaag cataaccatt actacttaca attctgtatg gctattgcga aaaaaggaat
      301 tgtgctgtat aagctcggcc aaaaacaaaa aggtaaacac tttatgcaac gagcacttag
      361 agtggctaaa gtgcttgaag aagagcgtat tctaaatggt atcaaaaatg aaatagatta
      421 ttttcttcac gatgaacttc aaaatctctc tttaaacgaa ttcaccaaaa tcgacatata
      481 aaaaaagcct aaatctagct tctccaactt ttggttgaat gactagattt aggcttttat
      541 tgttggcgct ctttaaaagc gcgttcgata tcacgttttg cttctttttg ttttaagtct
      601 tggcgtttat cgtatttctt tttacctcga gctacaccga tgagtacttt tgcgtagcca
      661 tctttaatat acatttttag cggaacaatc gaataaccgg actctttcgt ttctccaatt
      721 aaacggctga tttgcttctt atgtaaaagc aatttgcgcg ttcttagtgg atcatgattg
      781 tagcggttcc cttgttcata aggactaata tgcatattgt gtaagaaaat ttcccctttg
      841 tcgatacgtg cataggaatc ttttaagttt acccgtgcgt ttcttacgga tttaatttca
      901 gtaccttgca ggacaatgcc agcctcaaaa gtttcttcaa ttgcgtaatc gtggcgcgct
      961 tttttatttt gcgcaactag cttaccatca ccttttggca taactcccca tcctttctag
     1021 cgacgttttt tcttcttcgg gctttctttt gctacacctt gataaaaagg ttttttcttc
     1081 tttttctttt taggttttgt atgccattcg tcttctttac gttctgattt tggtttcacg
     1141 tcttctgatt taccagctct acgtttgtta cgaccttttt tctggttact cttgaaattt
     1201 cttgttttat caatcggttt ttcgcgttgg cgtttttgtt tatcgctcac tggacctggt
     1261 ttaccttcac tacgaagcgc aaaatcgatt tcacgagcat ccacgtctac tttagttact
     1321 tcgacttcca cttcatcacc aatacgataa atttggcctg tcctttcgcc aatcatcgct
     1381 aattgatttt ggtggaattt gaagtagtcg cctttcattg cgctcacatg aactaaacct
     1441 tcaatcgtag ttggaagttc gataaataag ccaaaattgg ttaccgaact aatgattccg
     1501 atgaaacgtt cgcccacttt gtcgaccata aattccgttt tcttcagttc gtctgtttcg
     1561 cgctctgctt caacggcacg gcgctccatt ttcgagctgt gttcagcaat ctcaggaagc
     1621 tcctcagcgc gtttttctaa cgtttccgga cgaacatccc cgttaattaa atactctcta
     1681 atcaacctgt gaacaatcaa atccgggtac cgacgaattg gtgacgtgaa atgtgtataa
     1741 aaatcagtag acaaaccaaa gtgtccggcg cttactgtgt catacttcgc ttgttgcatc
     1801 gaacgcagca taacagtcga aacaaccatc tcttccggtt taccttttac ttcttctagt
     1861 acttgttgta aagcagctgg gtgaatatcg ttagcagtcc ccttcacaat caaaccaaag
     1921 ttcgtaataa attcaaagaa ccgcgctaat ttatcttctt ttggatcttc atggatacgg
     1981 taaataaatg gtacatccat ccagtggaaa tgctctgcaa ctgtttcatt ggcagcaagc
     2041 ataaattctt caatcaaatg ctctcccgct gaacgttcgc gcataacgac tgcttctgga
     2101 tgaccgtctt catcaacaac tacacgtgct tctttaaagt caaaatcaat cgcgccacgt
     2161 ttttcacgtt tacgacgaag tatttcggcc aaatcttgca tcttttcaag cattggaaca
     2221 attggcgcat atttttcccg taaagcttcg tccttttcaa ctaaaatatc atttacatcc
     2281 gtatacgtca tacgttctgt tgttttaata atactttcaa aaatttcgtg attaaccaca
     2341 tgaccttctt catcgatttc catttcacaa ctcatagtaa aacgatctac ttgtgggtta
     2401 agcgagcaaa ttccgttcga tagtttatgt ggcaacatcg gaattacgcg gtcaaccaaa
     2461 taaacactcg ttccacgttc ttgcgcttcg acatcaagcg gcgagccttc tgtcacataa
     2521 tgcgttacat ccgcaatatg aacgcctagc ttccagttgc cattcggtag ttgcttaaca
     2581 gtaacagcat catctaaatc cttagcgtct gccccgtcaa ttgtaataat catttggtca
     2641 cgaagatcac gacggttacc aatatccgaa tcatccacca catccggcgc tttacttacc
     2701 tgctccatta cttcttccgg gaacccgatt gaaataccgt gtttatgaat aatcgataaa
     2761 atatccactc ctggatcatt acggtgaccg atgattgatt taacaacccc tcttgcacgc
     2821 gcatgcccag ttgcatattc cgtcaattca acaataactt tatgcccatc aactggtttt
     2881 aagccgtctt ctaaatcaat ttccacttca ccaaaaagtc gcttgtcatc tggcatcaca
     2941 attggagtac cagctaagtc ttccatataa gttccgacga tttgtgttgt cttccgttcg
     3001 acaattttct taatcgtacc ttctgccaaa ttatcgcctt tacgtttcgt gattgttgca
     3061 aaaactaaat caccgttcat tgcatcttta acttcatttg gcgggataaa aatatcgtcc
     3121 atttctttct cttctgggag aacaaagcca aaacctcgtt catgtgcacg aaatgttcct
     3181 tttactaagt ccattttttc tggtaatgca taccgattct tccttgagcg gacaatagtt
     3241 ccggaatctt ccagtttcac taaagctttc accattaatt taaagtcatc cgcattgttt
     3301 aaagctattt ctatttccaa atcttcaagc gcaaatgttt tatcaggcgc tgaagttaat
     3361 agattcataa ttttttcttc catttgtttt tgttccactt ctgtccctcc tctctctgtt
     3421 ttaaaaattg tctattcttg ccaatctaaa ctatctaaaa atgttaaaat ggcttgattt
     3481 acttcttttc gttctttgtc taatgtgatg acgtgcccag attctttaaa ccagtgcaat
     3541 tctttcttcg ttgactctac tgtatcataa attagctgtg ctccgctcac atcaaccata
     3601 tcgtcttttt caccttggac gaccattatt ggcgcataaa tcatatctat ttcagccacg
     3661 acgccattta tctcgtcctt tagtttagcg attgtgttca ttggggcgtc tttataggca
     3721 accatttcag catcgatttg ttcaggtgtt ttaccttcta attttttata attacgcaca
     3781 taatctaaaa agccttgaat tattggtgat gaactgtcca ttcttgttgg agtactcatg
     3841 gctataattc cctttaacgg cctagaaaaa cctaatttta gtgaaaaaag cccaccgagt
     3901 gaaagtcccg ccacagctat ttccgtgtaa ccaagtgatt ttaggtgatc ataggcttca
     3961 agaacatctt cccaccaatc gtttggtccc gtttttaaca gtaggtcagg agatacaccg
     4021 tggcctctgt attgaggtgc atagcaagta taattgtttt cttgtaaaaa cctacctaat
     4081 attcttacat ccgctgagct acctgtgaaa ccgtgcaaga gtaacactgc tcttttgcct
     4141 ttttcgaata ggaatggttg tggtggtgtt attttcatag taaatatcgc tccttggttc
     4201 tttttggagg tttggttgat ctgggttgga tgttattttt gttggagttc taggggattg
     4261 gctgtattta ataatttgtg ctcccctttt tgagttgttc gtccactttt ttttatggaa
     4321 acaacgctcc acttcgttac gccttgtatt ggagttctag ggaagcggaa tacgcttctt
     4381 tagaactcca ataaaaaacc acctaaattt tcattcaggt ggttaacatc tcgttactgt
     4441 acaaaatatg ccagtgcaat tagtattgcg aagaaaacaa cggatagaac gatggttgta
     4501 cgatgtagaa taagttctag tcctcttgct ttttgcttac cgaataattg ctcagctcca
     4561 ccagagatgg caccggataa gccagcactt ttacctggtt gaagtatgat aactgtaatt
     4621 aacagtactg atacgatgat gagtaagacc gttaaaactg tactcattgt tctttcctcc
     4681 taaaaccgcc caatttgact aagattaatt ttaccatatt tggtattata cgtaaaggtt
     4741 tgtttctata caatagttaa acaacttttt cctctagcca aactaaatcg tctaagaagt
     4801 aaattaagtc ttcttctaaa atgtctttct cacagtcgtt cacgatgtca tgccctgacc
     4861 ctgcatagaa acacaattgt ttatcatttg tatgaatgtg cttaaagata taattggcgt
     4921 tatctgcgtc gatttcttca tcttgacagc cttggccaat catggttggt acatgaattt
     4981 tttcaatgtc tcgcgctacg tttttgtaga aagtagcacg tgcttccgtc attacgtcta
     5041 tttcaggaag gtagtttttt agcatttgat ctgcttcttg ttctactata ccttgtttct
     5101 ttaattgttt agttaaatag ttttcgattg ggatatagcg cattttgcgg ttgacgttgg
     5161 cgcatagtgg aacaatcgct tttggtgaaa acgattctgc cattttaagc gcaaaaactc
     5221 cgcccattgc gacaccgaca attgcaattt cattatatcc gtctttttca agttgacgat
     5281 atccagccac cgcatcttca taccacattt ccggtgttgt tttcaagaaa atagcgggtt
     5341 catccccgtg acctctgaag tttggtgcat gcactgtgta tccattttct gctagaattt
     5401 ctccaagttc tcttacgtct tctgtagtcc ctgcaaagcc atgcaagagc aaaacagcac
     5461 gatttcccgc ttttaacgta aagctccgat ccgcactcat ttttacgcaa tcctcctaat
     5521 atcatcactt ttataatcca ctctattgta gcccatctga actaaataag ctaccttttg
     5581 agttctgacc aatagaccaa tattaacgct atccaaggaa cttgtcaaac acttttttca
     5641 caaagctcaa acgcgttgct accaaaggct tttccggagg tttcatttgt gaatttctgc
     5701 gcttaaatta gaaaagaaac tatgaattaa ttgtaacaat tgtttcggtt tttgccttgg
     5761 taaataatga agtccatttc ttacaataac catttcaccg tgttgaacag aatgcaccat
     5821 tttctttgta tctttggaag atattaaatc atattcaccc acaacagcta aaagtggcgc
     5881 gcttattttt tgcaaatccg cttctgacat atgtggatga taaatcgtta aagcaagttg
     5941 tcgtttcatc cgctcaaaaa agcgactaaa tggcgctaaa agaaatgcag ccccgtaggc
     6001 gacacgacaa aataaatctg gtaaaaatcg tatttgattt acatgatagt ttgttccaat
     6061 aacaacggat gcgatttgac ggttcggttg caatttcccc attacgagag caacaatacc
     6121 gccgtcgcta tatccgataa ctttatattt atcaattttc aaataatcga gtaacgaaag
     6181 catatctagc gccattactt caaaatcaag cggtgtattt cccgcttcac ttttcccgtg
     6241 tgcgcggcta tctacggcga ttacttgatg attagtagag aggtcatcaa tcatccgctt
     6301 taaagaacga tgattttgac cattcccgtg aataagcaag attggttcgc ctttaccgat
     6361 tatttgataa aacaagttaa ttccattgat ttctgcaatc atatagcatt tctccttgct
     6421 gaaaacattt tctaccctta ttttacacct gattatactt gatttcctat aaaaaagctt
     6481 ccattttcat taaaatacgc ctgattcttt taaaactaga atcaggcgca ccgtttattt
     6541 cataagtctt cggtgaaact gttgttgggg catatctgcg ttaatgattt tcttttgcac
     6601 agaatgtttt tccgctaagg ggtggctttt ttcatgcacc acagcgtctt tgatttttgg
     6661 agtttcgagc acttttgagg cctgactatt ttttactttc atcagcatta cctcctcttc
     6721 caaatcatta cccctctcgc tatttttaaa acagaaaaaa ctccgcgaaa atgttacttt
     6781 tcgcggagct tagcgtttta ttcaatcaac ttattttttt aagttgtaga aagtttcgtt
     6841 accatggtat tcagcaagat cagccaaatt gtcttcgatg cggagtaatt ggttatattt
     6901 tgcaacacgg tcagtacgag taggcgcacc agttttgatt tgaccagcgt ttgtagctac
     6961 tgcaatgtca gcgattgtgg aatcttctgt ttcaccagaa cggtgagaga taactgcagt
     7021 gtagccagcg cgtttagcca tttcaattgc atccaatgtt tcagtcaaag taccgatttg
     7081 gttaactttg attaggatgg agttagcgat acctttttcg ataccttctt taagtttagt
     7141 tgtgttagtt acaaatagat cgtcacctac taattgaacg cggtcaccaa tacgttctgt
     7201 aagtagtttg aatccgtccc agtcgttttc gtctaggcca tcttcaatag agatgattgg
     7261 gtatttagta atcatttctt cataccaagt taccatttct tcagaagtac gagttacgcc
     7321 ttcaccttta agttcgtatt taccagtttc gcggttatag aactcacttg atgcagcatc
     7381 catcgcaagt ttaacttctt cgccaggttt gtaaccagca tctttaattg cttgcatgat
     7441 tgtttcaaga gcttcttcat tggatttaag gtttggagcg aatccacctt catcaccaac
     7501 accagtgttt aagcctttac ctttaagtac agctttaagt gcgtgtagga tttcagcacc
     7561 catacgtaga gcttctttaa agtttggagc tccaacaggc attaccataa attcttgaac
     7621 gtcgacattg ttatcagcat gttctccgcc gttaaggatg ttcatcattg gaactggaag
     7681 aactttaccg ttcactccgc caagatattc atataaatgt acgcctagtt cgtcagcagc
     7741 agcacgagca gcagctaaag aaacaccaag aatagcgtta gcacctaatt tacctttgtt
     7801 aggtgtacca tcaagttcga tcattgcttt gtcaattccg atttgatcag ttacgtcaaa
     7861 accgataatt ttgtcagcaa taatgtcgtt tacgttttca acagctttta aaacaccttt
     7921 tccaaggtaa cgagctttgt cgccatcgcg taattctaca gcttcgtatt caccagttga
     7981 agcaccactt ggaactaaag cgcgaccaaa cgcaccagct tcagtataaa cttcaacctc
     8041 aacagttggg ttaccacggg aatctaagac ttcgcgagca taaacttcag taataataga
     8101 catttataat tctctccttt gttgggatta attgaatgaa atgaacaaaa aattcacttc
     8161 atattcaaag acccatccgt ttttaaattc gtatttattg tagctctgtt tgcaaaaaaa
     8221 ctaaagtaat aactaaaatt atttttgaat taaactttca cctgtcattt cggcaggttt
     8281 tttaacgcca agtaaatcaa gcatagttgg cgcaacgtca gccagacgac caccttcacg
     8341 aagcgttaca ccttttttcg ttacaattac tggaactgga acagtagtgt gcgcagtgtg
     8401 cggttttcct tctggagtag acattgtttc agagttacca tggtccgcaa agataatagc
     8461 tgatccacct ttttctaaaa taaggtctac tacacgacca agattttcat ctactgcttc
     8521 gattgcctta atcgttggct caagcatacc tgagtgacca accatatctg ggtttgcgaa
     8581 gtttaagatg atcgcatcgt gtttgtcgtt tttaatgtct tcaacaagtg catctgttac
     8641 ttcatatgcg ctcatttcag gttgcaaatc gtatgtttct acttttggcg aattgattag
     8701 aatccggttt tcaccaggga attcttcatt tcgtccacca ttcataaaga atgttacatg
     8761 tggatatttt tctgtttcag cgatacgcag ttgcgataag ccttcattag aaagtacttc
     8821 gccgataaca tttttcattt caattggctc aaaagcaact tcagcatcaa tgcttgggtt
     8881 gtaaagagtc attgtaacga atttgatgtt tttagggtgg ttagccccgc ggtcgaaatg
     8941 atcccattct ttatcagtga atgcattaga aagttgaatc gcacggtcag gacggaaatt
     9001 gaagaaaata actgcatcgt tgtctttaac tgttgcaaca ggtttgccat ctttagtaat
     9061 gatagctgga acaacgaatt catcattttt gtcattagca taagaagctt tgacaagttc
     9121 gattggatct tcaaattttt caccttcagc gtttacgatt gctttgtatg ctttttcaac
     9181 acgttcccag cgtttatcac gatccatcgc gtagaaacgt ccagaaacag tagcaatcgc
     9241 gccatagttt aagtcactaa tagctttttg tagtgtttct aaatattcta gtgaggattg
     9301 tggtgccacg tcacgtccat caaggaatgc atggatataa acgtttttca cgcctttatc
     9361 tttcgcagtt tctaaaagtg caacgaggtg attaatgtga ctatgcacgc cgccgtctga
     9421 tagtaaaccg aaaagatgta agtccgagtt gttttctttt gtatgagtga aagcattgtt
     9481 tagggcttta ttctcttgga attcgccttc ttcaatagct ttgtcaatac gagttaagct
     9541 ttggtagaca atacgtccag ctccgatgtt tgtatggcca acttcagagt tacccatttg
     9601 accttctgga agaccaacat caaggccggc agctttaagt tccccgtgag gaaaattagc
     9661 ccaataacgg tcgaaatttg gtttgtttgc ttgagctaca gcattaccta ctgtttctgc
     9721 acgtttacca aaaccatcga ggataataat tgctacaggt gatttactca ttttatttta
     9781 ctgcctccaa taatgctaag aacgatgctg gttctaagct tgctccacct acaagagcgc
     9841 cgtcaatgtc ggactctgca agataatcag caatgttttc aggttttacg ctaccgccgt
     9901 attgaatacg aactgcgtct gctgcttttt gagatacagc gtctgcaact tctgcacgaa
     9961 taactgcaca agtttcgttt gcatcagcac ttgtggaaga tttcccagta ccgattgccc
    10021 aaattggttc ataagcaata acagatttga ttacttgttc ttccgttaat ccagcaagag
    10081 ctgcacggat ttgaccacgt acccaagtat ctgtttgacc agcttcacgt tgatctaatg
    10141 tttcaccaca gcaaatgatt ggtgtcatgc cgtgtttgaa gattgcatgt gcttttttgt
    10201 taatatcttc gtctgtttcg tggaaatact cacgacgttc agagtgtccg ataataacat
    10261 aagaaacacc taaatcagca agtgcaaacg ggctaatttc gccagtgaaa gcaccttcgt
    10321 cttcaaaata acagttttgt gcagctacgc gaagattagt tccttcagta agacgaacta
    10381 attcttgtaa aaatagcgcc ggtgcagcaa ctactgattc aacagcatcg cttgatggca
    10441 cgttattttt tacgtcttct gcaaattgtc ctgcttttgc agcagttttg ttcattttcc
    10501 agttaccagc aataattggt ttacgcattt ggataaacat cctctcgata ttaaaaatta
    10561 tttttggttc agcttatttg tcgctaatag aagcaacgcc aggaagctct ttaccttcaa
    10621 gatattctaa tgatgcaccg ccaccagtgg aaatatgtgt gaatttgtca gcaaaaccta
    10681 agtccatagc tgctgctgcg gaatccccac caccgatgat tgttgttgca tccgttaagt
    10741 ttgcaatagc ttcacaaacg ccaattgtac ctttagcaaa gttgctaagt tcgaatacgc
    10801 ccattggacc attccataca actgttttag cgccttgaag ttcttttgta aataagtcaa
    10861 ttgtagcttg accaatatct agtcccattt catcagctgg aatgctatct gcactcactg
    10921 tatggaaagg agcatcgtta ctgaattctt tagatacaac tgcatcaact ggcaatacta
    10981 atttatcgcc agctttttca agtaagcctt tagcaagttc aactttatct gcttctaaaa
    11041 gagatttacc aatttcttga ccttgagctg ccatgaaagt gaaagtcatt ccgccgccga
    11101 caagaacttt gtctgctttt gtaagtaagt tttcgataac accgattttg tcagaaactt
    11161 ttgcgccacc taggattgct actagtggac gtgctggatt atcaactaca ccgccgatga
    11221 atttaatttc tttttccatc aaaaatccgg ccgctgattc taagttagaa gcgattccaa
    11281 cgttagacgc gtgcgcacgg tgagcagtac cgaaagcgtc atttacgaaa acgtcgccaa
    11341 ggctagccca gtattttcca agttctggat catttttgct ttctttttta ccatcaatat
    11401 cttcaaaacg tgtattttca aaaagaagta cttcgccgtc ttttaactca tcaattgctt
    11461 tttcaagttc tggaccacga gtagttggaa cgaatttcac ttcttttcca agtaattcgc
    11521 ttaaacgagc ggctactgga cgaagagatt ttccttcttt atcttcttct gtttttactt
    11581 ttccaaggtg agaaaataga attgctttac cgttttgttc taagatgtac tcaattgttg
    11641 gaagtgcagc aacaatacgg ttgtcgttag tgattttgcc gtctttcatt ggcacgttaa
    11701 agtcaacacg aactaaaact tttttgtctt ttaaatctaa atcagttaca acttttttag
    11761 ccatttagag ttcctccatt aattttaaag gattggggtc gcccccgtta tttcagaaaa
    11821 taagcggaaa caatagtgtc tccgcttatt cttgttattg ctgatgtgac tagcacttca
    11881 gtaaaattaa tctgctaatt atttagcgat ttttgcaaag tattctaaag tacgtactaa
    11941 ttgagcagtg tagctcattt cgttatcgta ccaagctaca gttttaacta attgttgatc
    12001 gccaactgta agaacttttg tttgagtttc gtcaaataat gaaccgaaag tcataccttt
    12061 gatgtcagaa gaaacaactt ggtcactagt gtaaccgaat gtttctggat cagaagctgc
    12121 ttccatagct gcatttactt catcaacagt aacttttttg tcaagaactg ttactaattc
    12181 agtaagggaa ccagttggaa ctggaacacg ttgagcagct ccgtctaatt tacctttaag
    12241 tgttggtaat acttcaccga tagctttagc agcaccagtt gtattaggga taatattttc
    12301 ggcagcagca cgtgcacgac ggaagtcacc ttttggatgt ggagcatcta atgtattttg
    12361 gtcaccagtg taagcgtgaa ttgtagtcat tagaccttca acaacaccaa atttgtcttc
    12421 taaaacttta gccataggag ctaaacagtt agtagtacag cttgcgccag agataactgt
    12481 ttcagttccg tctaatgttt catggtttac attgtaaacg attgttttca tgtcgccagt
    12541 tgctggagcg gagataacaa cttttttagc gccagcttta atgtgtaatt cagctttgtc
    12601 ttgcgctgtg aagaaaccag tacattctaa aacgatgtct actcctaggt caccccatgg
    12661 aagttcttct gggttacggt tagctaatac tttaacttct ttaccgttta cgttgaagaa
    12721 accatcatgt acttctactt caccgtcaaa acggccttga gttgtatcat attttaacag
    12781 gtgagctaac attttagcgt ctgttaagtc attgattgca acaacttcaa ttccttccac
    12841 attttgaata cgacggaatg ctagacgtcc gatacgtcca aaaccattaa taccaacttt
    12901 aactgtcata agtcaatttc ctccttgaaa atagtgtttt tttatttcaa aagggtatta
    12961 ctccctttta aaagcgattt tgctgctcct tcatccgtga ttaaaatcgt attttttgga
    13021 gcacttttca tatacgattt gattgctttg gctttcgatg taccgcctgc aacagcgata
    13081 atgtgcggga tttgcgctaa gtcttcgaat tgaagaccga atgtagggac cttatgtaca
    13141 acctcgcctt gttcatcaaa ataataacca aatgcttcac ctacagcttt acgacggatg
    13201 attttttcaa gtacatcttc gccggtatgt ctgcgtttcg ccatcgcgag cgcatcacct
    13261 atgcctaaaa taatagcatt tgcagattgt actaatcgta agccttcttg aattgccggt
    13321 tctttcagta aagaacgata ggcttcttcg cctaattgct ccggaacata gagaacgcgg
    13381 tgttttgtgt ttgtctttgt tgccatctta tcacaaattg tattcgcttg attgtcaagg
    13441 tcttcaccaa tacctccacg accgggaacg aaaagtagtt ctctgccttt tgcgaaatca
    13501 gttgtcatca tttcggcaac agtagccatt gtagagccgc ccataactgc gacgatgttt
    13561 cttttttcgg tgagcgccat gtctaattgt tcaaccgcca cacgtcccat ttcttcgcgg
    13621 acccatggag tatcatcgct atcaccttgc accaccaagc attttttgat ttgcaatttc
    13681 ttcgctaatt gttcttccat tgaatgtaac cctgaaagct gattcatgac attttccaaa
    13741 tcgcgaaaaa cgaccaagcc ttctttagta acggtcattc cggaagaagc aatttctact
    13801 aaaccttgtg ctttcaaaaa ttctacttcg ccgcgcagga cgcgttcact catgcctagc
    13861 attccggcaa gtgtccgtct cccaactggt tcagaaaaat aaatcgagcg taggatttgg
    13921 tagcgttttt gcataatcat caaaacgtcg ggcaataact ttttctgaat gttaattaag
    13981 tctgacattt ttaattgctc ctcatctttg gacgcttaac gacccactta gtcatctgac
    14041 gtcccgttag aactaaaaaa agtagagata gaggttttta caactttcaa gactattaaa
    14101 ctagctactt cagcttgtta acaaagtgtc tctcaatgtg atttttaccc cttctctttc
    14161 tgcttacgct ggtgaatctt ttttatgttc tttaactacc ctacgttccc tattctaaca
    14221 gtcttggcac aaatcttcaa gtgttaagtg ggacatttat gaaatattca cctgaaattt
    14281 acaattaaat cttaaactgc aaacttctaa ataggctata ctagttgttt tccacctctt
    14341 caaaaaacga aacatgctct tagttatttt tttgttttaa aaagacgttt tttgtcccac
    14401 acacggctcg tgaggcaaaa aacgtctttt aaaatctttt tcttttagag gaagaaggaa
    14461 tatttaattc taaacgatac tttgcgatag ctcttcttga aacttgaatt tctttttctg
    14521 cgagcatatc tactatcttt tgatcggaga gtggttttaa tttatcttct gctgctacaa
    14581 attcttgtac tagctttttg atagttgtac ttgaaatatc acctgtgttt tcgttctcgg
    14641 aagatttctt ttgtaaaccg gatgcaaaga agcgttttaa ttcgtacaca ccattcgttg
    14701 tttccatgta ttttccattc accgcacggc tcacggttga ttcatgtaca ccaagctctt
    14761 ccgctacttc ttttaaggtt aatggttgta aatgcgcgga attatctagg aaataagctt
    14821 tctgatgatt gacaatcgcc tctccaactc tttgcaaggt gttttcgcgt tgttcgatgc
    14881 ctttttttat ccaatcaaat tcgccggctt tttcgcgtag aaattgggcg acgtcttttt
    14941 cttcggttgc tcgcatcgtt tcgtagtatg cttcttggaa acgcacttgt ggcagaaatt
    15001 gttttgctag tgaaacagca aattcatctt cgtgttggag taaaattaaa tccgggacaa
    15061 catattgaac gcgttcagac tcaaattcag aacccggctt tggatttaag gtttgaatgt
    15121 agtcggaaac ttcttgaatg tcttgcaagc taacatccat ttctgcagcg attttcttcc
    15181 attttttctc tgcaaattcc gtgaagaatt tttggataac gtcataggca atataaggag
    15241 catccggcga gcgttcgatc tgtagtaaaa tgcattcacg cgcatctctt gccccaacgc
    15301 cagctggctc catgctttgc aagatttcta gaccttctaa cacactagaa tcatccatta
    15361 aaagcgccgc actgacatct ttcaaatcta tttgtaaata accattgtca tttaagcttt
    15421 ctattaaata taagacgata attttttgtg tttgcgttac atccattaaa tgtagctgtt
    15481 cttttagcgc atcggctaac gtcagcttat tgtcagctat ttgttctagc caatctgtat
    15541 catcagaact tccagcgctt tttcgactac tgtaagaaaa gtctgttgca aaatccgagc
    15601 ctggaatcac ttcaattaat gggttctcga gtgctttatc ttctaaaaat gccactaaat
    15661 cagccgttgc aaattgaagc attgcaatag actgggacaa ttgttgcgtc atatttaatt
    15721 tctgcgactg cttttgttgt tgcttttgga cgaaattaga ttctaaacgc acattaaaac
    15781 ctccattaaa aattcgtctg atatacctta taccaaacta aattccattt attgtcttca
    15841 ttataacatg ccatttttca aattacagca gattctcttt gttctatttc aaaaaaagtc
    15901 caagcacttc ttacagtgct tggactttcg tttattttgg taaatggttt aagaagttgc
    15961 gcgatgcaaa tccttctatc tcttctttag tgtagtgttt ttcgagtgtt tcaaggaagc
    16021 tttgatattt accgacgtgt tcgaggcctt tgacatgatc tgggatacca tcaaaatctg
    16081 aaccaaaacc aatgtttttc aatccgccaa gctcgcatat atgatcaata tgacgaataa
    16141 catcctctgt atcagccaca ccattatttg ttgtgaaaag tggatagaag actacatgaa
    16201 tcatcgcatc atgctcgatc atcgctttga tttgttcatc atctaagttt ctagggtgag
    16261 aacaaattgc tttggcattt gaatgactag caatcacaaa ttcagcctgt tccaacgttt
    16321 cccaaaaagc ttttacactc aagtgagaaa catccgtgaa tacttttctt tcatttaaaa
    16381 gatggataat gtcttttccg aagcgggtta gtcctgcgcc acgttcttcc ataatgccat
    16441 ccgctgccaa attggcgttg ttccacgtta gtccgacaga taatacgcca ccatcaagta
    16501 attgcgttaa tttatctaaa tcacgtccaa ttggttcaat gccttctaac gtcaacatcg
    16561 cgccaatttt atcttcaggt agattttcta aatcacacca ttttttcaca tgatgaatga
    16621 ttccaccttt gtgcagtacg tgttgtttaa aaatattaac ttgttcaacc gctttcttcc
    16681 atttatgttc aacagggata tcttcatcaa gaaaaatagc gaatccttgt agtaacattt
    16741 tagcctctat aagccgttca aaattcacat caagttcttc tgcatcttgg aaagtgtatt
    16801 ttccttttcc agcctgtagc ttgtaaagcg catcacagtg ggtatcaatt actctcattt
    16861 tctgtcgttc ctccttttag atacatctat tatatacttt tcagaggaat agacaagaga
    16921 tttttcaaag tcgttttcat tttgtcatct tatgctgttt acctggccag aacgcccatt
    16981 ttccaaggag cacagtaatt gatggaacta ggaacgggcg gacgatgaag gtatcgagta
    17041 ggacaccaat tgccgtaatt aagccaaatt gtactaagag ctgaattggc agtgtagtta
    17101 ggactccgaa agttcctgct aaaattaaac cagcagacgt gataaccccg ccagtttggc
    17161 caacaccttc tgtaatcgct tttctaagtg gcattttctt gctgtttttc caaatactag
    17221 aaatcataaa gatattgtaa tcttccccga gtgcgacgat gaaaacaaag gcatagagag
    17281 gaattaagcc agaaatcgcc tctactccca tcgcgtaatg aatgatgacc caaccaaggc
    17341 cgagcgctcc aacgaaggac aagagaactg tagcgactaa gtaaagcatt gctgtaatcg
    17401 agcgcaagta gcataaaagt aaaatcgcaa tcaaagcgat aacaagcgga ataatcactt
    17461 tttcatcgtg ctctgtcacc gcgcgatcat catattgtgt cgcagtttgt cccgcaatat
    17521 atacgtcatt tcctttgtcg gctgcggcac gtacttttgg aacgacatcc attgcttcat
    17581 tgctataagg gttatctttt aaaataagtg tatatttttg ataacctttg cttcgttctg
    17641 gaccagtcac tgaagccact ccatccacat tttcaagcga actcttcatt gattctttgg
    17701 agtttaccac tacttccatt ggcgcaagca taccggcacc aaaatgatca ctaattaagg
    17761 taaatccttc ccgagatggc atatcttctg ggaacgttga aagtgtgtca tacgtgtatt
    17821 tcacctgagt tgtaaaaatc ccacatccaa ttaaaataat caatgtgata attaaaattc
    17881 gtacaggatg tttcgcagac atttcaccaa ttttatgcca aaaacggttt tctttgtggt
    17941 gttttggtgt tttgcctttt ttcttcgcgc gtgtttcttc catttctagg gttcttggga
    18001 caaatggcca gaatgacaca cgaccgaata tgcctagaag tgctgggaca agtgttagcg
    18061 aggaaatcat cataatgaaa atcgctaaac taaatggtac ggcgaaattg tggaatgaac
    18121 catattctgc tgctaataat agaagtagtg cggccattac ggtcaatcca ctaagtgcaa
    18181 ttgcgccggc tgttccgcta aatgcttctt taaatgcttg gaatctgttt ttctctgtgt
    18241 gcagatggct gcggaatctg gatattaaga ataaacaata atccgttccg gcgccaaata
    18301 gtaatacggt cattatcgag agcccttgtg agccatatgt gataatacct tctttcgcga
    18361 gtaacccaag aatcggcgta attactaagt aggcaaaacc gactgcaatc aaaggaatta
    18421 acgctaaaat tggcgaacga taaattacta gtaaaaagac taaaacaagt agtactgttc
    18481 cgattagcag cgaaacgtcc gcatctttaa atagtccact cgcatccacg ctaataccag
    18541 ccggtccagt tgtccgagca acaagcgcat catcagcaga tactttctgt gcaaatggat
    18601 tttctccaat ggttgtttta gccgctgatt caagttgctt gaagctctct gttagttgat
    18661 ctgaagtcgc actgtctttc ataataacgg tttggataaa agtagttccg tctttagaaa
    18721 cttgttgttt gagcgccacg ggtggcattt tatcgtaagg aaccgccatt ttttgatagt
    18781 ctaccgggtt ttcggtcaat tctttgctgt atttttgaat attaactaag tcttcggttg
    18841 ttaaaccagt tgaacgatac caagtgataa gcgctggtac cccgtccgtt ccagcaaatt
    18901 tgtcgtcaat gagtttttgg gcgacaacag aaggctctga attcggtaaa tctttcgcag
    18961 cgtcatcttt gtaatcagct gcttttggaa agaaaaactg taaaataata attgcgataa
    19021 tccaaatacc taatgttata aaccggcctt tcttgccacc aaccccactg gcaattttac
    19081 ttaaaaatcc atctttcatt ataaatcccc ctttagtttg cttatttttt tcgtttatca
    19141 ttcgataagt gaaacaccaa aaaaagaagc acgctaaatt atacctcttt tttacatata
    19201 ccaaacatca ttaagttgat taattcatca atttgttctg tagtcgtttg cttttgcgca
    19261 aagctgcctt tcccagaaaa aagagggcta atagtggaca aacagtatct cgcagcagtc
    19321 tcagcactga caccatcacg caattcgcca gcattttcta gacgctcaaa aaatagttga
    19381 aatggttcca aataggtttt ttgccataat ttataaagta aaaattgatt ttctggtttc
    19441 atttcattaa gaatatcgtg aatcattaat agaatattgg ttggatgttc ctcaattaac
    19501 ataattaaca tatcatgtaa ttgttcttct tttgctttgg tcacttgcat aattggatgc
    19561 atttccactt ggatattttg cgtcaattca cgaaccactt caatatatag ggattcttta
    19621 tcttcaaagt ggtgatatag tgccggttgg gtaatgttgg caattttagc tatttctctt
    19681 gttgaaactg cccggtaacc cttttccata aataaatcac gtgctgtatt caaaattttt
    19741 cttctagtta ttcctaattc ttctgcccga gtccgcttct tttccatcat caccccacct
    19801 ttcttatttt gttgcagtta gtaatggaag gtttttatta atgagctttt ctagtgtttc
    19861 tttatgccat ttacgaccta gaacacgctt actaacaaga tattttcctt cctccagctc
    19921 gccttcttcg gtcactgcac gaatatataa ccgataaact aatttctttt tctcaagcgc
    19981 aatttgctga accgtttccc catccaaaaa gtgcatttcc gcatcactta atttaaatac
    20041 aaatgtaaaa attcccgctt ccgtgaacgc gagaataagc gaatgtctcc ctcgcatatg
    20101 gggccctgca tataaaaaat caatcgtttg aacggtcaaa ttattgtcag cactatatgt
    20161 tcttacttct ttttctaatc ggtctttcaa actagcagcc aaaataagcg cctcccttgc
    20221 tgatttatat tttaccagaa aatggcgggt tgaagtaggg aaagtttttt gatacttaaa
    20281 aaggattaaa ttatttccct tcataattca taaaaaagtc aaatcaagta ttctcttctt
    20341 gattcattca tgttaatatc aatattagtg tttattaagc gggtataaac gttctaacga
    20401 ttatataaat aataaaggga agttggtttg caaaatggga gaattaggta atatcgaaac
    20461 acgaaacggg agaacatcat tttttgacgg aggtttactg caatatattg gttggacaat
    20521 tcttggcact ttggtgacga tttgtacgat tggtatttgc tatccatggg ctttatgtat
    20581 ggtttatggc tggaaaatca atcatacagt tattgaagga agacgcttga aattccaagg
    20641 ttctgcggtt ggactttttg gtcactggat taaatggctc ttcctaacaa tcattactat
    20701 cggaatttat ggtttctggg ttttcattaa actagaagat tggaaagtaa aaaatacgat
    20761 ttttaaataa aatgaaaaaa catcttacaa catggctttt gccagatgtg ggatgttttt
    20821 ttagtatgcc ctcggaggga atcgaacccc cattttaaga accggaatct tacgtgctat
    20881 ccgttgcacc acgagggcta tatgtaggcc agaaatgctt accgtacgaa taataattat
    20941 agcgaaattc gtagtgtttt acaagtttta ttttaaatga agaagccagc gcctccaaag
    21001 atttgctggc tcaagtatta atttaataat gtccaaattg atgaactgtc aggcttctcg
    21061 cctcgtaccc accatttcgc ttggtatgtt tttccgttat acgtaacttt atctccgcca
    21121 ttataggctt tttgagcatt ccagatttgg atatctctac ttgctgtttg ccaaacatca
    21181 cttgtatctg gagtgttccc ttttgtccac catttcgctg tataagctac tccgttatag
    21241 taaacttggt cacctgcatg gtaaatttgg tccgatttcc aggtgttcag tggatctagc
    21301 ggttttgttt taatagtgat ttcattactt actaatgaac gattgccaga tgtatctact
    21361 gcatacactt tataattata gcttttattg ctggctaatt ttgtatcttc aaacatggtt
    21421 ttcgtggatg ttgcaatttt tgtattgtta cgataaattt cataattttt cacttctaca
    21481 ttatctgtgg aggcttgcca acaaagagca atagttgtct ccgtttgtcc atgagacatt
    21541 aaactttttg gtgcagttgg tgcttcatta tctactgctg gggcttcttt tgtcgtcaca
    21601 tcaatactgt cgcttaatgt agatttgttt ccggcgaaat cttttgctcg aacagtgtaa
    21661 gtgtatgcgg tatttgattc tacagctgta tcctcataag aagctgtttg actttctccg
    21721 agtactacgc catcacgtaa aatttcataa ccttttattc ctacgttatc ggtagaaaca
    21781 gtccaggtca aacttacatt cttagcggta gtagttgctg ctaaattagt cggttctgtc
    21841 ggcgcttcgt tgtcaacagc tggtgctaca ctagaattaa taatgtttgc atcaattact
    21901 tgatagaatg catttcctgt atcagcaatg ttccaaacgc ccaaaataac gtagtatcct
    21961 gaacgatcat ctggaatatt aatttcttgt tttgttaaag catttggtac gcttccatcc
    22021 gcttcaatcg ttgtgagtgg ctctaatgat gctctagtta acggtttatt tgggtcccaa
    22081 ccctttttag taataaaata ttgccagctg cttgttctgt gtggcgcagt taatgtccat
    22141 tctacagtta atgggcctga ttgtatatct acttttgccc aacggtttgc agtttgagcg
    22201 tctaacagtg aatatttccc accgcccgca atactcccgt cagcaggtcc gcttgctgga
    22261 aatccttttg gagcctccac actttgtggt tcatattgtg ctgatccaac cccaacatta
    22321 atccctttgt tggctaaata tacacgactt gctggttttg atatgtatcc atgagctgaa
    22381 gcagttgttt gaaaaagaac tacagctaac gtaaacaccg caaaaaacat tccaatcttc
    22441 gtcattttct tcatgatgca ccttcctttc agcatagttc attatacctt tttgttaaat
    22501 tttatagaaa taattcgcct cagactttat cgtttgacct agtttgacca ttcgtgtatg
    22561 atataaacaa agctaattta aaattcacat ttaacaggag gaatcttgat atgaacttaa
    22621 ttccaacagt aatcgaacaa actagccgcg gtgaacgtgc atacgacatt tattcccgtt
    22681 tattaaaaga cagaattatt atgttaggat ctgcaattga tgataacgtg gcgaattcga
    22741 tcgtttctca attactcttc ttagatgcac aagatcctga aaaagatatt ttcctatata
    22801 tcaattcacc aggtggaagt atttcagctg gtatggccat ttacgataca atgaatttcg
    22861 ttaaagcgga cgtacaaact atcggcatgg gtatggcagc ttccatgggc tcattcttac
    22921 taacagctgg tgcaaatggc aaacggtttg ccttgccaaa cgctgaaatt atgattcacc
    22981 aaccacttgg tggcgctcaa ggtcaagcga ctgaaatcga aatcgctgct cgccacattt
    23041 taaaaatcaa agaacgtatg aatacgatta tggctgagaa aactggtcaa ccgtatgaag
    23101 tcattgctcg tgatacagat cgtgataatt tcatgactgc acaagaagca aaagattacg
    23161 gcttaattga tgatatcatc attaacaaat ctggcttaaa aggctaataa aaaaaagagg
    23221 ttttgcacaa aatgcaaaac ctcttttttt atactttatt ttacacgaag cgctgaatgt
    23281 tttcttccgt agaatgtata cactagtatt cctatcacaa accaaatacc gaatgcaatc
    23341 catgttgttt tagataagtt aatcattaaa tatacacaaa gcaaaaagga aagtgctggt
    23401 actactggat aaaatggcgt tctaaatcct ttttgattca agtctggatt tctccgtaaa
    23461 aagaaaatcc caatagaaac catcgcaaaa gcaaacaacg taccaatatt aattaattgt
    23521 gctaaatctg ccatcggtac agtagaagca attagtccca ttactgtcgc aaaaatcatc
    23581 gtatttctca caggtgtatc atttttgctt atttttgaga acgattttgg taataatccg
    23641 tcacgtccca ttgcaaataa caagcgtgta ccaccataag acataacaag tacaaccgtt
    23701 gtcatcccaa caatcgcacc aactgacaac aagcccgcaa tccagttttg attaatagct
    23761 tgaagcgcga aagcaactgg tgcactaaca tcaactaaat ccgtataagg aacaacccct
    23821 gtaagtactg cagaaagtaa aatataaagt agtgtacaga ttgccagtga agaaataatt
    23881 cctattggca tatttttttg tggatttttc acttcttccg cggcacttga tacagcatca
    23941 aagccgatat aagcaaagaa aactgtggaa gctcctgtaa tgactccttg tacaccaaac
    24001 ggcaagaacg gcgtccaatt atcaggtttc acatagaaag ctcctactaa aataaataat
    24061 acaaccactg caatttttac taacaccata atattattca ctcgtgtgga ttcacgaata
    24121 ccaaaactaa gtaaaatacc aattaccata actactacaa atgcaagtaa atcaaaatag
    24181 gttccggcac tcgggtcata agctgaagaa atcaccgttg gaatatgtaa gtcaaatcct
    24241 gctagtagac tcttcatata agaagaccaa ccacttgcga ttgcagcaac agccagacca
    24301 tattctaaaa tcagtgacca ccctaaaatc catgcaacac cttccccgaa cacatggtaa
    24361 ctgtaagtat atgcgctacc tgcgactggt aatttagaag caaattccga ataacataat
    24421 gccgccaaac agcaagcaat tcccgcaata ataaaagaaa taataattcc tggtcccgca
    24481 atgacagaag ctacctgccc tggaagaata aatatccctc ccccaacaac cgctccgact
    24541 ccaagcatcg ttaaatcaaa cgctcctaac gttttgttca gatgatgttt atctgtcgct
    24601 gggttatgaa aactcttttt tctgaaaaaa gaattaactt tcgtcataaa aattcctcct
    24661 tcttaaattc c
//
LOCUS       DASDYK010000033        23243 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.033, whole genome shotgun sequence.
ACCESSION   DASDYK010000033 DASDYK010000000
VERSION     DASDYK010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 23243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23243
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.033"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            75..1115
                     /gene="rsgA"
                     /locus_tag="U0308_001311"
     CDS             75..1115
                     /gene="rsgA"
                     /locus_tag="U0308_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEM2316278.1"
                     /translation="MTLEQYGFTNFFKEQKIAATSSYGRVTAVFRDYYRVITENEEFL
                     ASLKRGNFYELSSTSLPAVGDFVEVSSDAQILSVLERKTVFSRMNKDSEEQLIAANFD
                     YALIVMSLNHDFNLNRLERYLTVAWDSGATPIIILTKADLVEDLTAFAQQLETVAYGV
                     PAYYVDNLSHHGFEALERDLKPNSTLVLLGSSGVGKSSFINSLAGTDLMKTAGIREDD
                     SKGKHTTTHREMHLLTNGWIVIDTPGMREFGVGFNQAGLETTFSDVEELAEGCRFHDC
                     SHTQEPGCAVKAALEDGTLTMQHYENWLKLQREMAYHARKNSPALARQERDRWKVIQK
                     SLRTHLKTRPKK"
     gene            complement(1154..3325)
                     /gene="pnp"
                     /locus_tag="U0308_001312"
     CDS             complement(1154..3325)
                     /gene="pnp"
                     /locus_tag="U0308_001312"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEM2316279.1"
                     /translation="MSEKQVFSTEWAGKTLSVEVGQLAKQASGAALIRYGDTVVLTAA
                     VGSKKPRPGDFFPLTVNYEEKMYSVGKVPGGFLKREGRPSDRATLTARLIDRPIRPLF
                     AEGFRNEVQITSTVFSVDQDCSPEMAAMLGSSVALVISDIPFEGPIAGVDVGRIDGKY
                     VINPTIEQAEKSDISLTVAGTYDAINMVEAGAKEVSEEAMLEAIMFGHEEIKRLCEFQ
                     QQIIAAVGKEKREIELFVSDPELEAEVKAASEGKMKAAIKTEEKKAREAAIEDVKEEI
                     LESYKAKELENEAEILSEVAHILEMIEKDEMRRLISQDKIRPDGRKVNEIRPLSSEVG
                     MLPRVHGSGLFTRGQTQALSVCTLAPLREHQIIDGLGTEEYKRFMHHYNFPQFSVGET
                     GPRRAPGRREIGHGALGERALQYVIPSEEEFPYTIRLVSEVLESNGSSSQASICGSTL
                     AMLDAGVPIKAPVAGIAMGLVKLGDDYTILSDIQGMEDHFGDMDFKVAGTKDGITALQ
                     MDIKIDGLSRQILDEALTQAKEGRLHILEHLTSTISAPREELSAYAPKIITLNIKPEK
                     IKDVIGPGGKQINAIIDETGVKIDIEQDGTVYIASQDQAMNRKAIAIIEDIVREVEVG
                     EVYTGKVRRIEKFGAFVELFKGTDGLVHISELAHERVGKVEDILKLGDEVTVKVIEVD
                     QQGRVNLSRKALLEKKEQPEGDKKPQAEKKFYPKTKKPESK"
     gene            complement(3573..3842)
                     /gene="rpsO"
                     /locus_tag="U0308_001313"
     CDS             complement(3573..3842)
                     /gene="rpsO"
                     /locus_tag="U0308_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEM2316280.1"
                     /translation="MALTQERKNEIIAEYRVHDTDTGSPEVQIAVLTAEINSLNEHVR
                     VHKKDHHSYRGLMKMVGHRRNLLTYLRKKDVQRYRELIKRLGLRR"
     gene            complement(3979..4923)
                     /locus_tag="U0308_001314"
     CDS             complement(3979..4923)
                     /locus_tag="U0308_001314"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEM2316281.1"
                     /translation="MKTIYLHHPITTDEWTDINKVMALGFFDGVHLGHQAVIKKAKQI
                     AEKKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVVRFTTQF
                     SELSPQAFVDNYLVALHVQHVVAGFDYSYGKKGEGKMTDLAKYADGRFEVTIVDKQTA
                     ASDKISSTNIRRAIIEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNED
                     YLIPKLGVYAVKFRVNGETHLGMASIGYNITFKDDQALSIEVYILDFHREIYGEEAEI
                     EWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFANLED"
     gene            complement(4993..5907)
                     /gene="truB"
                     /locus_tag="U0308_001315"
     CDS             complement(4993..5907)
                     /gene="truB"
                     /locus_tag="U0308_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEM2316282.1"
                     /translation="MNGIIPLWKERGMTSHDCVFKLRKILHTKKVGHTGTLDPEVEGV
                     LPICIGRATKLAEYVTDEGKVYVAEITLGKSTTTEDATGETVMTKELADISADELQAA
                     LTKLTGKITQIPPMFSAVKVNGKKLYEYARAGIEVERPSRQVDIYSLTRLDGEATLNE
                     ANPTFQLEISCGKGTYIRTLAVMIGELLGYPAHMSKLERTRSGFFKKEDCLTLAEIDE
                     MMQASDSSFLYPLEKGIESMAKLVIDEEIHAKVLNGGLLPKSLFIEVENEPRAALIFN
                     DKLTAIYKPHPEKNELWKPEKVIELHQA"
     gene            complement(6003..6347)
                     /gene="rbfA"
                     /locus_tag="U0308_001316"
     CDS             complement(6003..6347)
                     /gene="rbfA"
                     /locus_tag="U0308_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEM2316283.1"
                     /translation="MNVRANRVSEQMKKELGDILNRKIKDPRLGFVTVTGVDVTGDLQ
                     EAKVFISILGTDKEKENTLLALAKAHGFIRSEIGCRIRLRKVPEMSFEIDNSIAYGNR
                     IDELLRDLNNDQ"
     gene            complement(6364..6642)
                     /locus_tag="U0308_001317"
     CDS             complement(6364..6642)
                     /locus_tag="U0308_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF503 domain-containing protein"
                     /protein_id="HEM2316284.1"
                     /translation="MIQSVVSEFFMQEPQNLKEKRAILKRIVTRAKQKFNISIAETDY
                     QDLWQRAEISFAIVSSSHIQAEKEAREVLAFLDSFPEWERAETVMEKL"
     gene            complement(6639..8987)
                     /gene="infB"
                     /locus_tag="U0308_001318"
     CDS             complement(6639..8987)
                     /gene="infB"
                     /locus_tag="U0308_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEM2316285.1"
                     /translation="MSKVRVYEYAKEHQVSSKKVIEALKDLGIEVANHMSTINENALR
                     QLDNAIDGTNKKAEAPKKETTSNENGNSKGPNKPNMTNSNEKSNKPNNPAGQANKPAT
                     ANKSQGAKPATNKPANTSKQTQSSGNQQQAGGQKRNNNNNSNRPGGGNPNRPGGNNRP
                     NRGGNFNNKGRNTKKKGKLNHSTVPPTPPKPKELPEKIVFSESLTVAELAKKLYREPS
                     ELIKKLFMLGVVATINQSLDKDAIELICDDYGVQVEEEIKVDVTDLDVYFENELNEAV
                     DESKLVERPPVVTIMGHVDHGKTTLLDSLRNTKVTLGEAGGITQHIGAYQLEIHDKKI
                     TFLDTPGHAAFTAMRARGAQITDITILVVAADDGVMPQTIEAINHAKAAGMPIIVAVN
                     KIDKPQANPDRVMQELTEYELVPEAWGGDTIFAPISAKFGEGLENLLDMILLVSEVEE
                     LKANPDRRAIGSVIEAELDKGRGPVATLLVQDGTLNIGDPIVVGNTFGRVRAMVNDLG
                     RRVKKVGPSTPVEITGLNDVPQAGDRFVVFEDEKTARNIGETRASRALVAQRSATNRV
                     SLDNLFEHMKAGEMKEVNVIIKADVQGSVEALAASLRKIDVEGVNVKIIHTAVGAINE
                     SDITLAAASNAIVIGFNVRPTAQAREAAENESVDIRLHRVIYKAIDEIEAAMKGMLDP
                     EFQEKIIGQAQVRQTINVSKVGTIAGCYVTDGKITRDSGVRIIRDGIVVFEGEIATLK
                     RFKDDAKEVAKGYECGITVQNFNDIKEDDVIEAYVMEEIERK"
     gene            complement(9010..9309)
                     /locus_tag="U0308_001319"
     CDS             complement(9010..9309)
                     /locus_tag="U0308_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxQ family RNA-binding protein"
                     /protein_id="HEM2316286.1"
                     /translation="MDKKALSLLGLANRARKITTGEELVLKAVRNGKAKMVLISEDIS
                     EKTEKTIRNKCEYYNVVVKKAGTREMIGGAIGKDTRAIVAILDKGFAVKLAELLG"
     gene            complement(9302..9586)
                     /locus_tag="U0308_001320"
     CDS             complement(9302..9586)
                     /locus_tag="U0308_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HEM2316287.1"
                     /translation="MRNKKIPLRKCIITGERLPKGELLRIAYSKDGALTIDPTGKAPG
                     RGFYIIKSVEVCEKAKKKNAIFHQLKMPEQESFYDELITYVKSLEEPTNG"
     gene            complement(9601..10719)
                     /gene="nusA"
                     /locus_tag="U0308_001321"
     CDS             complement(9601..10719)
                     /gene="nusA"
                     /locus_tag="U0308_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEM2316288.1"
                     /translation="MSTELLDALHVLEHDKGISREVLVEAIEAALTSAYKRNFKDAQN
                     VRVDLNMENGSIRVLARKEAVEQVFDSRLEISMEEAHKLNPVYKPGDVVELEVTPKDF
                     GRIAAQTAKQVVTQRVREAERGIIYDEFIDREDDIMTGIVERQDSRFIYVNLGKIEAI
                     LSQNEQMPNETYHAHDRIKVYLTKVEKTTKGPQIFVSRTHPGLLKRLFEMEVPEIYDG
                     VVEIKSVAREAGDRSKISVYTANEEVDPVGACVGPKGARVQTIVNELKGEKIDIVEWS
                     EDPFTFVANALSPSKVLDVIVNEADQATTVIVPDYQLSLAIGKRGQNARLAAKLTGWK
                     IDIKSETVATELGIYPRNDVEAPEVEDAESETYTEDEE"
     gene            complement(10749..11216)
                     /gene="rimP"
                     /locus_tag="U0308_001322"
     CDS             complement(10749..11216)
                     /gene="rimP"
                     /locus_tag="U0308_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEM2316289.1"
                     /translation="MSKVLEQVEAIVTPITDELQLELVDIAFEKEGPNWFLRIFIDKD
                     GGVDIDECAAVSEKVSEKMDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHV
                     TSYEPIDGRKMWEGTLVSYDGTTLVITITDKTRKITCEIPKDKVAKARLAIQF"
     gene            complement(11398..15732)
                     /locus_tag="U0308_001323"
     CDS             complement(11398..15732)
                     /locus_tag="U0308_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEM2316290.1"
                     /translation="MTAKEEEKQERFQLLMTQIGLQDVTTYEEFTKDAKIEKLVADKK
                     NKTWQFHLHVPQIFPAALFHMMDVGMKRAFSQIAETEMQIVPENQTIDETLIQDYWNL
                     IVEPIGKQSPMIGKLLMEQKPTFKEPHFIEVAVHNDMEEATIQQRFQTKIIESYGKAG
                     FPRLAMKMHLLDQSETEEYKAFALAKQEEDQKKAAEAVQVMQKRQAEGQSGGGGAAPL
                     TGPFQIGYKIKDDEEVKRLGDIYDEERRITVQGLIFATEIRELRSGRSLLQFKITDYT
                     SSMIIKMFSRDNEDAAMFQNLKKGMWVKVRGSVQNDTFVRDLIMMAQDVNEIAGVKRL
                     DTAEEKRAELHLHSPMSQMDATSSVDSLFKQAADWGHKAIAITDHSVAQSFPEAYGAG
                     QKYGLKVIFGIEANLIDDGVPIAYNDQHIALEDATYCVFDVETTGLSAVYDTIIELAG
                     VKMKNGEIIDKFEAFIDPGHPLSATTINLTGITDDMVKGSDPIDVVLKRFKEWSGDDI
                     LVAHNASFDMGFINTAYEKVGLEKAENAVVDTLELARFLYPHFKNHRLNTLTKKFNII
                     LEQHHRAVFDAEATAYLAWKLIKDAKEMHNIDFHDSLNDYMGEGDAYKRARPFHATIY
                     AQTAVGLKNLFKLITMSNINYFYRVPRIPRSQLKKLREGLIIGTACSQGELFEAMMQK
                     GMQAAEKVAEFYDFIEVQPKPVYAPLIERELVRDEKALEEILKNIVRVGEKTGKPVVA
                     TGNVHYKDPVDKIYRKILIHSQGGANPLNRAELPDVHFRTTDEMLKEFAFLGEEKAKE
                     IVVTNANLVVDWMEDLKPIKDELYTPKIDGAEDEVRNMSYAMAHQLYGEKLPEIVEAR
                     LEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMTEITEVNPLP
                     PHYLCPNCKDSEFFDDGSVGSGFDLPDKDCPHCGTPYQKEGQDIPFETFLGFKGDKVP
                     DIDLNFSGDYQPVAHAYTKEIFGEDYVFRAGTIGTVAEKTAFGYVRNYERDMNMTIRG
                     AEIDRLVAGCTGVKRTTGQHPGGIIVIPDYMDVYDFTPVQFPADATDSEWKTTHFDFH
                     SIHDNVLKLDILGHDDPTAIRMLQDLSGIDPKTIPTDDPDVMKLFGSTESLGVKPADI
                     DSKTGTLGIPEFGTRFVRQMLEQTKPTTFSELVQISGLSHGTDVWLGNAEELIKNKTC
                     ELPDVIGCRDDIMVFLIYQGLESSLAFKIMESVRKGKGLTEEMEEAMMANKVPLWYIE
                     SCKKIKYMFPKAHAAAYVLMAVRIAYFKVHYPLYFYATYFTVRADDFDLTSMVNGKEA
                     VKATMKEVNDKGMEASTKEKNLLTVLEIANEMLARGFHFQKVDLYKSSADEFIIDGDS
                     LIPPFNAIPSLGTNVAKQIVAARENGEFLSKEDLQQRGKVSKTIIQYMDDQGCLEGLP
                     DQNQLSLF"
     gene            complement(15838..17544)
                     /locus_tag="U0308_001324"
     CDS             complement(15838..17544)
                     /locus_tag="U0308_001324"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007474535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEM2316291.1"
                     /translation="MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLP
                     LATLMLRKIETIIREELEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASR
                     DFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDA
                     YSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGE
                     DTIAYSDASDYAANTEMAPVLYMEKKSHELEKDMEKVATPDQKSIADIVEFLEVPIEK
                     TMKSMLYQVDDEVIMVLVRGDHEVNDIKIKNALDATNVELVDPAVAVELLGANFGSLG
                     PINVPENTRVFADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDL
                     SPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILS
                     AIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYSSLQDAGFSVLIDDR
                     AERAGVKFADADLIGLPIRITVGKKAAEGVVEVKIRKTGEMIEVRQDELLNTLPILFG
                     DK"
     gene            complement(17585..18847)
                     /gene="rseP"
                     /locus_tag="U0308_001325"
     CDS             complement(17585..18847)
                     /gene="rseP"
                     /locus_tag="U0308_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEM2316292.1"
                     /translation="MTTIIAFIFVFGLIVFFHELGHFLFAKRAGIMVKDFSIGFGPKI
                     FAYRKKETQYTIRLLPIGGYVRMAGEDGEEIELKPGYRVGLELTPEETVSKIIVNGKD
                     QYVNAQPIEVSLCDLEKELFIEGYEDYDDTKKVRYQVERDALVIDGKIETMITPYDRS
                     FNAKSLGNRAMTIFAGPLFNFILAILIFTALAFVQGGVPSTDNTLGNVLPDGAAAEAG
                     LKKGDEVLSINGKETKSWTDIVQSVSENPGKTLDFKIERDGKTQDIDVKPATQKENGK
                     DVGKIGVETPMDSSFTAKITNGFTQTWNWIVQIFTILGNMFTGGFSLDMLNGPVGIYT
                     STQQVVQYGFMTVLNWTAVLSINLGIVNLLPLPALDGGRLMFFLYELVRGKPIDPKKE
                     GIIHFAGFALLMVLMILVTWNDIQRAFF"
     gene            complement(18861..20003)
                     /locus_tag="U0308_001326"
     CDS             complement(18861..20003)
                     /locus_tag="U0308_001326"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEM2316293.1"
                     /translation="MKKIILLGATGSIGTQTLAIIRENPEKFQIVALSFGRNMERGRA
                     IIKEFKPKMVAVWHTRDRVILEAEFPNVKFFNGLEGLREVATYLDGDVLLNAVMGSVG
                     LLPTLDAIEAGKAIAIANKETLVTAGHLVMRAAKEKNISLLPVDSEHSAILQALNGEN
                     TERIEKLVLTASGGSFRDKTREQLSEVTVKEALKHPNWNMGNKLTIDSATMFNKGLEV
                     MEAHWLFGVDYDDIEVVIQRESIIHSMVQFVDGSFIAQLGTPDMRMPIQYALTYPDRL
                     YIPYEKEFRITDFSALHFEKVDYERFPALKLAYNAGKIGGTMPTVLNAANEIAVAGFL
                     NGQVAFYNIEALVENAMNRHTSISDPDLDTILQVDQETRAYVKTLL"
     gene            complement(20018..20806)
                     /locus_tag="U0308_001327"
     CDS             complement(20018..20806)
                     /locus_tag="U0308_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEM2316294.1"
                     /translation="MKTRIITAVVALIFFIPFVVYGGIPFELLSILLATIALYEVLVM
                     TKQRIFSMNGIITLLLMWLVVVPDRYLDFLDTLHITEMEVIFILMALLLANTVFSRNK
                     FHFDQVGICMVAAFYTGFGFHYLALTREAGLMYVLFALFIVWSTDTGAYFIGKAIGKH
                     KLAPNVSPNKTVEGFIGGIVCALVIAGGFYYFAELPGNIALVLALLVFLSIFGQLGDL
                     VESALKRFYGVKDSGKILPGHGGILDRFDSLLFVLPLLHILQII"
     gene            complement(20820..21578)
                     /locus_tag="U0308_001328"
     CDS             complement(20820..21578)
                     /locus_tag="U0308_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEM2316295.1"
                     /translation="MFKKLFRQDENILNSELAEDLPIPRHVAIIMDGNGRWAKKRFLP
                     RIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRPTDEVDFLMKLPVEFFDSF
                     VPELIEENVRVNVMGYRENLPNHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITA
                     AKEAMKELELKGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQLAYS
                     EFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL"
     gene            complement(21809..22366)
                     /gene="frr"
                     /locus_tag="U0308_001329"
     CDS             complement(21809..22366)
                     /gene="frr"
                     /locus_tag="U0308_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEM2316296.1"
                     /translation="MSKEVLSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDY
                     YGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSI
                     PQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLRSYGEDV
                     QKLTDESIKNIDSITKDKEAEILEV"
     gene            complement(22366..23094)
                     /locus_tag="U0308_001330"
     CDS             complement(22366..23094)
                     /locus_tag="U0308_001330"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEM2316297.1"
                     /translation="MDTPDYKRVVLKLSGEALAGNDGFGINPSVVNLISAQIKEVVEL
                     GVEVAIVVGGGNIWRGKLGSEMGMDRAAADQMGMLATIMNSLSLQDSLENIGVATRVQ
                     TSIDMRQIAEPYIRRKAIRHLEKGRVVIFAGGTGNPYFSTDTAAALRAAEIEADVILM
                     AKNNVDGVYNADPKLDENAKKYEELSYLDVIKEGLEVMDTTASSLSMDNDIPLIVFSF
                     TEQGNNIKRVILGEKIGTTVRGKK"
BASE COUNT         6496 a         4974 c         4053 g         7720 t
ORIGIN      
        1 aaatggaaaa cctcataatt aatacggggg tattttacct atagaatgct cccaactaca
       61 aaggagcgaa aacattgaca ttagaacaat acggttttac aaattttttt aaagaacaaa
      121 agatagctgc aacctcctct tatggtagag ttacggcggt atttagagat tattatcgcg
      181 ttattacgga gaatgaagaa tttttagcat cattgaaacg tggaaatttt tatgaactat
      241 cctctacttc ccttcccgct gttggtgatt ttgtagaggt cagtagcgat gcgcaaatac
      301 tctctgtact agagcgtaaa acggtctttt ctcggatgaa taaagactca gaggaacaat
      361 tgattgcagc gaattttgat tatgctctca ttgtgatgag tttgaatcat gactttaatt
      421 tgaatcgatt agagcgttat ttgacggttg cttgggatag tggtgcaaca ccgattatca
      481 ttttaacaaa agcagattta gtggaggatt taacagcctt tgctcagcag ctcgagacag
      541 ttgcttatgg cgttccagca tactatgtgg ataatttatc acatcatggt tttgaagctt
      601 tagaacgcga tttaaagccg aatagtacgc ttgttttgct tggctcttcc ggtgtcggaa
      661 aatcttcttt tattaattcg cttgcaggta ctgatttaat gaaaactgct ggtatccgcg
      721 aagatgatag taaaggaaaa catacgacga cacataggga aatgcatttg cttacgaatg
      781 ggtggattgt gattgataca cctggaatgc gtgaattcgg tgttggtttt aaccaagctg
      841 gattagaaac cactttctcg gatgtagagg aattggctga aggatgtcgt tttcacgatt
      901 gctctcatac acaagaacca ggttgcgctg taaaagcagc attagaagat ggcactttaa
      961 ctatgcaaca ctacgaaaat tggttgaaat tgcagcgaga aatggcttat cacgctcgaa
     1021 aaaatagccc tgctctcgca agacaagaac gtgaccgctg gaaagttatt caaaaatcac
     1081 ttcggacaca tttaaaaaca cgtccaaaaa aatagtaaaa aaagcaagta gctcaggcta
     1141 cttgcttttt gtattattta gattctggtt ttttcgtttt aggatagaat tttttctctg
     1201 cttgtggttt tttatcgcct tctggttgtt cttttttctc aagcaaagct ttacgtgata
     1261 agttaacgcg accttgttgg tctacttcga taactttaac agtaacttca tcacctagtt
     1321 ttaggatatc ttctacttta ccaacacgtt catgtgctaa ttcagaaatg tgaactaagc
     1381 catctgtacc tttgaataat tcaacaaatg cgccaaattt ttcgatacga cgaacttttc
     1441 cagtataaac ttctcccact tccacttcac gaacgatgtc ttcgatgata gcaattgctt
     1501 tacggttcat tgcttgatct tgagaagcaa tgtacactgt accatcttgt tcgatatcaa
     1561 tttttacgcc agtttcatca ataattgcat tgatttgttt tccgccaggt ccaataacat
     1621 ctttgatttt ctcaggtttg atgttaagtg taatgatttt tggagcataa gcagaaagtt
     1681 cttcacgtgg tgcgctaatt gtgctagtca agtgttctag aatgtgtagg cgcccttctt
     1741 ttgcttgcgt taatgcttcg tccaaaattt ggcggcttaa gccatcaatc ttgatgtcca
     1801 tttgaagtgc tgtgatacca tcttttgttc cagcaacttt aaagtccata tcgccaaagt
     1861 gatcttccat accttggata tcagaaagaa tggtgtaatc atcgccaagt ttgacaagac
     1921 ccattgcgat acctgcaact ggcgctttaa ttggaacacc agcatcaagc attgcaagtg
     1981 tagaaccaca aatacttgct tgcgaactag agccattaga ttcaagaact tcagatacta
     2041 aacggattgt gtacgggaat tcctcttcgg aaggaataac atattgtaac gcacgttcac
     2101 ctaatgcacc gtgaccgatt tcacgacgac ctggagcacg acgaggacct gtttccccaa
     2161 cactaaattg cgggaagtta taatgatgca taaagcgttt gtactcttct gtccctaaac
     2221 catcaatgat ttggtgttca cgaagcggtg ccagtgtaca tacacttaga gcttgtgttt
     2281 gaccacgagt gaataaacct gaaccatgga cacgaggaag cataccaact tcagaagaaa
     2341 gtggacgaat ttcgtttact ttacgaccat ctggacggat tttatcttga gaaatcaaac
     2401 gacgcatttc gtctttttcg atcatttcaa gaatatgagc tacttcgcta agaatttctg
     2461 cttcgttttc tagttctttt gctttatagc tttctaaaat ttcttctttt acatcttcaa
     2521 ttgctgcttc acgtgctttt ttctcttctg ttttgatagc tgctttcatt ttgccttcac
     2581 ttgctgcttt tacttctgct tcaagttcag gatcgcttac gaaaagttca atttcgcgtt
     2641 tttctttacc aactgcagcg ataatttgtt gttggaattc acaaagacgt ttaatttctt
     2701 cgtgaccgaa catgattgct tcaagcattg cttcttctga aacttctttc gctccagctt
     2761 ctaccatgtt gattgcatca taagttcctg caacggttaa gctaatatca cttttttctg
     2821 cttgttcgat agttgggttg ataacgtatt ttccatcgat acgacccaca tccacaccag
     2881 cgatcggtcc ttcaaatgga atatcggaaa taactaatgc aacagaagag ccaagcattg
     2941 ctgccatttc tggagaacaa tcttgatcca cactgaaaac agtagatgta atttgaactt
     3001 cattacggaa accttctgca aataatggac ggattggacg gtcaattaga cgcgctgtta
     3061 atgtcgcacg gtcactagga cgtccttcac gttttaaaaa tccaccggga actttaccaa
     3121 cggagtacat tttttcttca tagttaactg ttagtgggaa aaagtcgcct ggacgtggtt
     3181 ttttagaacc tactgctgct gttaaaacga ccgtatcgcc gtaacgaatt aaggctgctc
     3241 cacttgcttg ttttgctaat tgacctactt cgacagataa tgtcttacct gcccattctg
     3301 ttgaaaatac ttgtttttca gacatatttt aatctccttt gattaggaaa aacacgaacc
     3361 agaaacttta ccatgcataa gaatgttcac gcacacttta gattttctaa agcacacatg
     3421 aatccaaaaa cctgctaaaa atagcgattt ttgaagcacg tttttggatt catgcgataa
     3481 agtttcattt cttcggcgtg ttttccaaaa tttagtatag ttaatactca aaaaaaagcg
     3541 ggaacttttg gtatcccgct ttcgtctggt ttttatcgac gtaaacctaa acgtttgata
     3601 agttcgcggt aacgttgaac atctttttta cgtaggtaag ttaataggtt acgacggtga
     3661 cctaccattt tcattaatcc acggtaagag tgatgatctt ttttgtgtac gcgaacgtgt
     3721 tcatttaagc tattgatttc agcagttaat acagcgattt gtacttctgg tgaaccagta
     3781 tctgtatcat ggacacggta ctctgcaata atttcatttt tgcgttcttg agttaaagcc
     3841 atttctttcc acctccttct aaaatatccc caattactga gccaagcgtc ggtgagtcgc
     3901 aaaagccaag taatggttct gttcgtacag atttaaagat acactattta ggctctaaaa
     3961 gcaagcagaa atagtcgttt aatcctctaa attagcaaaa aatgctcttg tatcttgttc
     4021 gtctttttct aactgagcaa ttaaaccttc taccccatta aatttaagtt ctggtcggaa
     4081 aaattgatac cattcaattt ctgcttcttc gccgtaaatt tcgcggtgaa aatctagaat
     4141 atatacttca atggacagcg cttgatcgtc tttaaacgtg atattgtagc caatgctagc
     4201 catccccaaa tgagtttccc cgttcacgcg aaattttact gcatagacac caagtttcgg
     4261 aatcaagtaa tcttcattta cacggatatt cgctgttgga aaaccaattg ttctacctcg
     4321 tttatctccg tgaatgacgg ttccttttgt tgtatatgga tagcctagta gttgatttgc
     4381 ttcttctaac tcgccttcta taatcgcacg tctgatattt gttgagctaa ttttatcact
     4441 tgcagcagtt tgtttatcaa caatcgtaac ttcaaaacga ccatcagcat atttagccaa
     4501 atcagtcatt ttcccttcgc cttttttacc gtaagaatag tcgaaaccag ctaccacatg
     4561 ctgtacatgc aaagcgacta aataattatc cacaaaggct tgcggagata gctcggaaaa
     4621 ctgtgttgta aagcgaacta catacataat atctacgcca agttcagcca ttttttccgc
     4681 tttatcttca agtggtgtga ggtatttcac ttgtttgcgg atattactta aaacaacgga
     4741 tgggtgcgga tcaaaagtta atactgctgt ttgaaggcct tttttttcag caatttgttt
     4801 cgctttttta atgacagctt gatgacctaa atgcacgcca tcgaaaaagc caagtgccat
     4861 tactttgttt atgtcagtcc actcgtccgt tgtaatcgga tgatgtaagt aaatcgtctt
     4921 catttttgcc acttctcctc taaattcgaa ttcctctcat atcataatat aagaaagcta
     4981 tagtcgcaat aactatgctt gatgtaactc gatgactttt tctggtttcc aaagttcatt
     5041 tttctctgga tgaggtttgt aaattgctgt taatttatca ttgaagataa gtgcggcacg
     5101 aggctcattc tctacctcta taaataatga ttttggtaaa aggccgccat ttaaaacttt
     5161 cgcatggatt tcttcatcaa tcactaattt ggccatggat tcaatgcctt tttcaagtgg
     5221 atataaaaag ctgctatcac tcgcttgcat catttcgtca atttctgcca gtgttaagca
     5281 atcttctttt ttgaaaaagc cgctacgagt ccgttctagt ttggacatgt gcgctggata
     5341 tcctaataat tcaccaatca taactgcaag tgtgcgaata taagtacctt ttccacaaga
     5401 tatttctaac tgaaaagtcg gattcgcttc atttagcgta gcctcgccat ctaagcgagt
     5461 taacgaataa atatccactt gcctggatgg gcgttccacc tctataccag ctcttgcata
     5521 ttcatacaat ttcttgccat tgacttttac agcagaaaac atagggggaa tttgagtaat
     5581 ttttccagtc aatttagtga gcgcggcttg aagttcatca gcggaaatgt ctgctaattc
     5641 cttggtcata accgtttcac cagtcgcatc ttccgttgta gtcgatttgc ctaaagttat
     5701 ttctgctacg tagacttttc cttcatctgt tacgtattct gctagtttcg tcgcacggcc
     5761 gatacaaatt ggaagtacac cctctacttc tggatccagc gtgccagtgt gtccaacttt
     5821 tttcgtatgt aaaatctttc ttaatttaaa aacgcaatca tgacttgtca tcccgcgttc
     5881 tttccacagt gggataatgc cgttcatcaa gctcctcctt ttaagaaaaa aagtttaaga
     5941 caattcccac ttatatcccg tttgaatgag aagataaagg gactgcctta aacttttatt
     6001 tattattgat cgttatttaa gtcgcgaagc aattcatcga ttcgatttcc gtaagcgatg
     6061 gaattatcta tttcaaaaga catttctgga actttacgaa gtcgaatacg gcaaccgatt
     6121 tcagagcgga taaagccatg cgctttcgca agtgcgagta acgtattttc tttttcctta
     6181 tctgtaccaa gaatggaaat gaacacctta gcttcttgta aatcaccagt aacatcaact
     6241 cctgttacag taacaaaacc taagcgcggg tctttaattt tacgatttaa aatatcgccc
     6301 aattcttttt tcatttgctc actgacacga tttgctcgaa cgttcaagtg tattcacctc
     6361 tttttataac ttctccataa ctgtctcggc gcgttcccac tcaggaaaag aatcaagaaa
     6421 agcaagtact tctctggctt ctttttctgc ttggatgtgc gaggaagata cgatagcaaa
     6481 gctaatttcc gctcgctgcc ataaatcctg ataatccgtt tcagcaatgg agatattgaa
     6541 tttttgtttt gctctcgtta ctattcgttt caggatagct cgtttttctt tgaggttttg
     6601 cggttcctgc atgaaaaatt cactaacgac tgattgaatc attttctttc aatttcttcc
     6661 ataacgtacg cttcaatgac atcatcttct ttgatatcgt tgaagttttg tactgtgata
     6721 ccacattcgt atccttttgc aacttctttc gcatcatctt taaagcgttt aagtgtagca
     6781 atttcgcctt caaagacaac aattccgtca cggataatac gaacgccact atcacgagta
     6841 attttaccat ctgttacgta acagccggca attgtaccca ctttggaaac attgattgtt
     6901 tgacgaactt gcgcttgacc aataattttt tcttggaatt ctggatcaag catccctttc
     6961 atcgctgctt caatttcatc aatggcttta tagataacac ggtgtaaacg aatgtctaca
     7021 ctttcgtttt ctgctgcttc acgagcttga gcggttggac gaacattaaa tccaataaca
     7081 attgcattag aagctgcagc aagtgtgata tctgattcat tgatagcacc aacagcagta
     7141 tgaataattt taacgttaac accctctaca tcaattttgc gaagagatgc agcaagagcc
     7201 tctacagaac cttgaacgtc tgctttaata ataacgttaa cttctttcat ttcgccagct
     7261 ttcatatgtt caaataagtt gtctaaactt acgcggttgg ttgcagaacg ttgcgctact
     7321 aacgcacggc ttgcacgagt ttcaccgatg tttcttgctg ttttttcatc ttcaaaaaca
     7381 acaaagcgat cgccggcttg tggtacatca tttaatccag tgatttcaac tggtgtactt
     7441 ggaccaactt ttttcacgcg acggcctaaa tcattgacca ttgcacgaac acgaccaaac
     7501 gtgttaccaa caacaattgg gtctccaata ttaagcgttc catcttgtac tagtagagtc
     7561 gcaactggac cgcggccttt atcaagttct gcttcgataa cagaaccgat agcacgacga
     7621 tctggatttg cttttaattc ttctacttca gaaacaagta aaatcatatc taacaagttt
     7681 tcaagacctt caccgaattt agctgagatt ggcgcgaaaa ttgtatcgcc accccatgct
     7741 tcaggaacta attcatattc tgttagttct tgcattacgc ggtcagggtt tgcttgtggt
     7801 ttatcaattt tgttgacagc aacaataatt ggcattcccg cagcttttgc gtggttgatt
     7861 gcttcaattg tttgtggcat aacaccatca tctgctgcta caactaaaat cgtaatatcc
     7921 gtgatttgcg caccacgagc acgcattgca gtaaaggcag catgtcccgg tgtatcaagg
     7981 aaagtgattt ttttgtcatg gatttcaagt tggtaagcac cgatatgttg ggtgatacca
     8041 ccagcttctc ctaaagtaac ttttgtatta cgaagggaat ctagtaatgt tgttttacca
     8101 tggtcaacgt gtcccataat agtaacaact ggtgggcgtt caacaagttt agactcgtca
     8161 accgcttcat ttagttcatt ttcaaagtac acatctaaat ctgttacatc gactttaatt
     8221 tcttcttcta cttgtacacc gtagtcgtca caaattagtt cgattgcatc tttatctaat
     8281 gattggttaa tcgttgcaac aacaccaagc ataaatagtt ttttgattag ttcagatggt
     8341 tctctgtata attttttcgc taattccgct actgttagag attcgctgaa cacaattttt
     8401 tcaggaagtt cttttggttt tggcggagtt ggcggtactg tactgtggtt tagcttccct
     8461 ttcttcttcg tgttacgacc tttattatta aaattgccgc cacgattcgg gcgattgtta
     8521 ccgcctggac ggtttggatt gccgccgcct ggacgattgc tgttgttatt gttgttgcgt
     8581 ttttgtccgc cagcttgttg ttggttacca cttgattgtg tttgtttact tgtgtttgct
     8641 ggtttgtttg tcgctggttt tgcaccttgg cttttgtttg cagttgctgg tttattagct
     8701 tgccctgctg ggttatttgg tttattcgac ttttcattac tatttgtcat atttggtttg
     8761 tttggcccct tactatttcc attttcgttg ctagtagttt ctttctttgg tgcttcggct
     8821 tttttatttg tgccatcaat ggcattatct aattgtctta atgcattttc attaatcgtg
     8881 gacatgtgat ttgccacttc aatacctaag tcttttaatg cttcaatgac ttttttgctt
     8941 gatacttgat gttcttttgc gtattcatat acacgaactt tactcatgtc gtacacctcc
     9001 gtataagatt caaccgagta attctgctaa tttaacagca aatcctttat caagtatggc
     9061 aactattgca cgtgtgtctt tgccgattgc accccctatc atttcccggg taccggcttt
     9121 tttcacgaca acattgtagt attcacactt gttgcggatt gttttctcgg ttttttcgga
     9181 tatatcttct gaaatgagaa ccatttttgc tttcccattt ctaactgctt ttagtactaa
     9241 ttcttcacca gtggtaattt tacgtgctcg gttagcgagg cctaataagg aaagtgcttt
     9301 tttatccatt cgttggttcc tcgagagact tcacataagt aattaactca tcataaaagg
     9361 actcttgttc cggcattttt agttgatgaa aaatggcgtt tttctttttc gctttttcgc
     9421 atacttctac acttttaata atgtagaaac cgcgtccagg tgctttgcct gtaggatcta
     9481 tcgtaagcgc tccgtctttc gaatacgcaa tacgaagaag ttcgcctttt ggcaagcgtt
     9541 caccggtaat aatacatttt cgaaggggga tttttttatt acgcatgata attctccttt
     9601 ttactcttca tcttctgtat aagtttcgct ctctgcatct tccacttctg gcgcttctac
     9661 gtcattacga ggatagatgc ctagttcagt tgcaactgtt tcacttttaa tatcaatttt
     9721 ccaaccagtt agttttgctg ctaaacgggc attttgacca cgtttaccaa ttgctagtga
     9781 taactgatag tctggtacga ttaccgttgt tgcttggtct gcttcgttca caataacatc
     9841 taacactttg gaagggctaa gtgcattggc tacgaatgtg aaaggatctt ctgaccattc
     9901 aacgatatcg attttttcgc ctttaagttc attgacgatc gtttggacac gtgcgccttt
     9961 tggtcctaca catgcgccaa ctggatctac ttcttcattt gcagtgtaaa cagagatttt
    10021 agaacgatct cctgcttcgc gtgcaacaga cttgatttct acaacgccgt catagatttc
    10081 aggtacttcc atttcaaaaa gacgtttcag taagccaggg tgtgtacggg atacaaaaat
    10141 ttgcggccct tttgtcgtct tttctacttt tgttaaatat actttgatgc ggtcatgtgc
    10201 atgataagtt tcgtttggca tttgctcgtt ttgggacaaa attgcttcga ttttaccaag
    10261 gtttacatag ataaaacgag aatcttgacg ctcaacaata ccagtcataa tatcatcttc
    10321 gcgatcgata aattcatcgt aaatgatgcc acgttccgct tcacgaacac gttgggttac
    10381 aacttgtttc gctgtttgag ctgcgatacg tccaaaatct tttggtgtta cttcaagctc
    10441 cactacgtca cctggtttgt atactggatt cagtttgtgt gcttcttcca tagagatttc
    10501 aaggcgagaa tcaaatactt gttctactgc ttcttttcta gctaaaacac ggatagaacc
    10561 attttccata tttaaatcta cacgtacgtt ttgtgcatct ttgaagtttc ttttatatgc
    10621 agaagtaaga gcagcttcaa ttgcttctac taaaacctct cttgaaatac ctttatcatg
    10681 ttctaacaca tgaagagcat ctaataattc tgtgctcatt ttttattcag ctccttattc
    10741 tttgcttttt aaaattgaat tgcgagtctt gctttggcta ctttgtcttt aggaatttca
    10801 caagtgattt tgcgtgtttt gtccgtgata gtaataacga gtgttgtccc gtcataacta
    10861 acaagcgttc cttcccacat tttacggcca tcaattggtt catatgaagt aacgtgaaca
    10921 tatttactta ccgcattttc aaaatcttgc tctttcttca gtggacgttc agccccagga
    10981 gaagatactt ctaaaaagta gttttgtgta atggggtcat tttcgtccat tttttcacta
    11041 actttttcgc tcacggctgc gcattcatcg atatctacgc caccatcttt gtcaataaaa
    11101 attcgtaaaa accaatttgg accttctttt tcaaaggcaa tatctacgag ttctagttga
    11161 agttcatccg tgattggtgt aacaattgct tctacttgtt ctagtacttt actcatttca
    11221 gcctccttaa gagatacgct tttccagcta attcgtcccc tacttctgcc acaggtgact
    11281 ctttgacaga tttgcaaaac gaaagcgtgg gcattggccc acgcttggct gagttatcgt
    11341 agtatttctt aaataagttt atcacaaatt gtgactacaa gcaagttttg ccctttttta
    11401 gaatagtgac aactgatttt gatcaggcaa tccttccaag catccttgat catccatgta
    11461 ctgaatgatt gttttggata cttttccgcg ctgttgtaag tcttctttcg acaaaaactc
    11521 tccattttca cgagcggcaa ctatttgttt tgctacattg gttccaagac ttggaatcgc
    11581 attgaatggc ggaataagtg agtctccgtc aataatgaac tcatcagcag acgatttata
    11641 caaatcaact ttttggaaat ggaatcctcg agctagcatt tcattcgcaa tttctaaaac
    11701 ggttaataag tttttctctt tcgttgaagc ttccatccct ttatcattta cttctttcat
    11761 ggttgctttc acggcttctt ttccgtttac catcgatgtt aaatcgaaat catcggcacg
    11821 aacggtgaaa taagttgcat aaaaatatag tggataatgt actttgaaat aagcaatccg
    11881 gactgccatt aaaacgtaag cggcagcatg ggctttgggg aacatgtatt tgattttttt
    11941 acaagattca atgtaccaaa gtggcacttt attcgccatc attgcttctt ccatttcttc
    12001 cgttaagcct ttccctttac gcacagactc catgatctta aaggctaatg aactttctag
    12061 cccttgataa attaggaaaa ccataatatc atcacgacaa ccaattacat ctggcagttc
    12121 gcatgttttg tttttgatta attcttccgc atttccaagc caaacgtccg tcccgtggga
    12181 aagaccagag atttgtacta gctcagaaaa tgttgttggt ttagtttgtt ctagcatttg
    12241 tcttacaaaa cgcgtcccaa attcagggat tcctaatgtt cctgtttttg aatcaatatc
    12301 tgcaggctta acaccaagtg actctgtaga cccaaatagt ttcatgacat ctggatcatc
    12361 ggttggaatc gtttttggat cgataccgct taaatcctgt aacatccgga tagcagtcgg
    12421 atcatcgtgt ccaagtatat ctaattttaa tacgttatca tgaatcgaat ggaagtcaaa
    12481 atgggtcgtt ttccattctg agtccgtcgc atcagctggg aactgcaccg gtgtaaaatc
    12541 gtaaacatcc atataatctg gaataacgat aataccacct ggatgttgcc cggtagttcg
    12601 tttaacgcct gtacacccag cgacgagtcg atcaatttct gccccgcgaa tagtcatatt
    12661 catatcgcgt tcataatttc gaacataacc aaaagcggtt ttctctgcaa cggtaccaat
    12721 cgtccccgca cggaaaacgt aatcctcacc aaaaatttct tttgtataag catgggctac
    12781 cggttgataa tcccctgaga agttcaagtc aatatcgggt actttatccc ctttaaatcc
    12841 taagaaagtt tcgaaaggaa tatcttggcc ttctttttga taaggggttc cgcagtgcgg
    12901 gcaatcttta tccggtaagt caaaaccaga accaaccgaa ccatcatcaa agaactcaga
    12961 atccttacaa ttcgggcaaa gataatgtgg tggaagtggg tttacttcgg taatttccgt
    13021 cattgtagca acgaaagaag aaccaaccga tccccgcgaa ccaaccagat agccatctac
    13081 aagtgatttc ttaacaagct tatgtgaaat gagataaata actgcgaaac catggccgat
    13141 aatacttttc agctcttttt ctagtctagc ttccacgatt tctggcagtt tctcaccata
    13201 aagttgatgt gccatcgcat aactcatatt tcgaacttcg tcttctgcac catcaatttt
    13261 tggtgtatat aattcgtctt tgattggttt aaggtcttcc atccaatcaa cgactaaatt
    13321 cgcattagtt acaacaattt cttttgcttt ttcttcacca aggaaggcaa attctttcaa
    13381 catttcatcc gttgtacgga aatgaacatc aggtaattca gcccgattaa gcggatttgc
    13441 tcctccttgc gaatggatta aaattttacg ataaatttta tccactggat ctttgtaatg
    13501 tacattacct gttgcaacga caggttttcc agttttctca ccgacgcgga cgatattttt
    13561 caatatttct tctaaagctt tttcgtcacg aactagttca cgttcaataa gcggtgcata
    13621 aactggcttc ggttgaactt caatgaaatc atagaactcc gctacttttt ctgcagcttg
    13681 catccctttt tgcatcattg cttcaaataa ttctccttgg ctacaagcag ttccaataat
    13741 taagccttcg cgtaattttt ttagctgcga gcgaggaata cgtggtaccc ggtaaaagta
    13801 attaatattg gacatcgtaa ttaatttaaa gagattcttc aaaccaacag ccgtttgtgc
    13861 gtaaattgtg gcgtggaatg gtcgcgcgcg cttgtatgcg tcgccttctc ccatatagtc
    13921 atttaaagaa tcgtgaaaat cgatgttgtg catttctttc gcatctttaa ttaacttcca
    13981 agccaaatac gctgtagctt ccgcatcaaa aacagcccgg tgatgttgtt caagaataat
    14041 attgaatttc tttgtcaaag tattcaagcg gtgattttta aaatgtgggt aaagaaaacg
    14101 tgctaattct aatgtatcga caaccgcatt ttctgctttt tctagtccaa ctttttcata
    14161 agcagtgtta ataaaaccca tgtcaaaaga agcattatgg gccacaagaa tatcatcacc
    14221 gctccattct ttaaatcttt ttaaaacaac atcaattgga tcagaacctt ttaccatgtc
    14281 atctgtaata ccagttaaat taatagtggt tgcagaaagc gggtgtccag gatcaataaa
    14341 agcttcaaat ttatcaataa tttcaccatt tttcattttt acgccagcaa gttcgataat
    14401 cgtatcataa acggcggata aacctgttgt ttcaacgtca aatacgcaat atgttgcatc
    14461 ttccaaagca atatgttgat cgttataagc gattggcaca ccatcatcta taagatttgc
    14521 ttcgatgcca aaaataacct ttaagccata cttttgccct gctccatacg cttctgggaa
    14581 agattgggca acagagtgat cagtaatagc aatcgcttta tgtccccaat cagcagcttg
    14641 tttgaacagt gaatcaacag atgaagtggc atccatttga ctcattggag aatgaagatg
    14701 tagttctgcg cgtttttctt cagcagtatc aagacgcttc actccagcga tttcattgac
    14761 atcttgcgcc atcatgatta agtcccgcac gaaagtatcg ttttgaacgc ttcctctaac
    14821 tttaacccac ataccttttt tcaaattctg gaacatcgcc gcatcctcgt tatcacgaga
    14881 aaacattttt ataatcattg aacttgtata atcagtaatt ttgaattgta acaaactacg
    14941 accactgcga agctctctaa tttctgtcgc gaagattaag ccttgaacgg taatacgtcg
    15001 ttcctcatca taaatgtccc caagacgttt aacttcttca tcgtctttaa ttttataacc
    15061 aatttggaac ggaccagtta gtggagcagc tccaccgcca ccgctttgcc cttctgcttg
    15121 tcgtttttgc ataacttgca cagcttcagc ggcttttttc tgatcttctt cttgtttggc
    15181 cagtgcaaaa gctttatatt cctctgtttc agactggtca agcaagtgca ttttcatggc
    15241 aaggcgtgga aatccagctt tcccgtaact ttcaataatt ttcgtctgga atcgttgctg
    15301 aatagtcgct tcttccatgt cattatgaac cgctacttca ataaaatgag gttctttaaa
    15361 tgtaggtttt tgctccatta aaagctttcc aatcatcggt gactgcttcc caattggctc
    15421 tacgattaag ttccaataat cctgaatgag tgtttcgtca attgtttgat tttctggaac
    15481 aatttgcatt tctgtttccg caatttggct gaacgcacgc ttcattccaa catccatcat
    15541 atggaaaagt gctgctggaa aaatttgtgg aacgtgtaaa tgaaattgcc atgttttatt
    15601 tttcttgtcg gcaacgagtt tttcgatttt agcatctttt gtaaattctt cgtaagttgt
    15661 tacatcttgt aaaccgattt gtgtcattaa cagctgaaat cgttcttgtt tttcttcctc
    15721 ttttgcagtc attccgaata acaccccttc atttaaattt ataaaagcca gatgtccctc
    15781 ataacccgtt tttataggaa cgagtgaagt ttcatctggc acgaattgct caataaatta
    15841 tttatctcca aagagtatag gcagcgtgtt tagtaactca tcttgacgaa cttcaatcat
    15901 ttcgccagtt tttctgattt tcacttcaac tacgccttct gctgcttttt tacctactgt
    15961 aatacgaatt ggtaagccaa ttaaatctgc atcagcaaat ttaactccag cacgctctgc
    16021 acgatcatcg attaacacac tgaacccagc atcttgtaaa gagctataaa gtgtttcggc
    16081 aaaagcaact tgctcttcgc tcttcatatt aacgggaatt aaatgtaaat caaatgggct
    16141 aatttgttta tcccaaacaa aaccattttc atcatttgat tgttcagcaa tggcagataa
    16201 aatacgtgat acgccaattc cgtaacaacc cataataatt ggctgtgctc gaccattttc
    16261 atctaaaata gttgcattca ttgcttcact atacttcgtt ccaagtttga aaatatgccc
    16321 aacttcgatg ccttcagcaa acttgattac gccttgacca tctggagata aatcaccaac
    16381 ttgaatcatc cgtaaatcaa aatagctagt aacggagaaa tcgcgatctg gattcacgtt
    16441 aatataatgg aaaccatctt cgtttgcacc aactaccgca ttaacgatat ctttcacagc
    16501 attatctgca aagacgcgcg tgttttcagg aacattgatt ggtcctaggg aaccaaaatt
    16561 agctcctaat agttcaacag caacagctgg atccactaat tctacattgg ttgcatctaa
    16621 tgcatttttg attttaatat catttacttc atggtcaccg cgaacgagaa ccattatgac
    16681 ttcatcatcg acttgataaa gcatcgattt cattgttttt tcaattggta cttctaaaaa
    16741 ctcaacgata tcagcaatcg atttttgatc aggagtcgca actttctcca tatctttttc
    16801 tagttcatgc gattttttct ccatatataa aactggagcc atttctgtgt tggcagcata
    16861 atcggaagca tcgctataag caattgtatc ctcgccaata tcagataatg ccataaattc
    16921 ttttgattca ttcccaccga tagaaccaga atccgcaata acagaacgga actcaagacc
    16981 acatctagtg aagatattcg aataagcttg gtgcattaag ttatacactt catccaaact
    17041 ttcactggtt gcgtggaaag aataggcatc tttcattatg aattcgcgac cacgtaatag
    17101 accgaagcgt ggacgttttt catcccggaa cttagtttga atttggtata aagtaagcgg
    17161 caaacgtttg taagatttaa cttcatcgcg taaaagtgca gttataactt cttcatgggt
    17221 tggcccaagc gcaaagtcgc gagaagcgcg gtcttttagg cgcattaatt ctgggccgta
    17281 atcgttccaa cgaccagatt cctgccaaag ttccgcaggc tgaagcgcag gcattaacag
    17341 ttctgcagcg ccaattgctt ctagctcttc acgaataatt gtttcgattt ttcgtaacat
    17401 caatgttgca agtggtaaat aactataaat cccactagct gtttgtctta taaaaccagc
    17461 acgaagaagt aattggtgac tctttacttc tgcatccgct ggtacttctt ttaatgttgg
    17521 tataaatgtc atcgtttgac gcatttaaaa cacccctttt tccctttatt agtctatctc
    17581 ttttttagaa aaatgcacgt tgaatatcgt tccatgtcac aagaatcatc agaaccatta
    17641 aaagtgcaaa tccagcaaaa tggataatgc cttctttttt agggtcaatt ggtttgccgc
    17701 gaacgagttc gtataagaag aacattaaac gtccgccatc tagtgctggt aacggtagta
    17761 agttaacaat tcctaagtta atacttaaaa cagccgtcca gtttagtaca gtcataaagc
    17821 catattgaac gacttgttgc gtacttgtgt aaatccctac tgggccattt agcatatcga
    17881 gcgaaaatcc gccagtaaac atgtttccta gaatcgtaaa tatttgtaca atccaattcc
    17941 atgtttgcgt aaatccattc gtaattttag cagtaaaaga ggagtccatt ggtgtctcta
    18001 caccgatttt tcctacgtct ttgccatttt ctttttgtgt tgcgggtttg acatcgatat
    18061 cttgtgtctt gccatctcgc tcaattttga agtcaagtgt ttttccgggg ttttccgaaa
    18121 cactttgaac aatatcggtc caagatttcg tttcttttcc attgatggaa agaacctcat
    18181 cccctttttt tagaccagct tcagcagcag ccccgtccgg tagaacattc ccaagcgtat
    18241 tatcggtgct tggaacgccc ccttgtacaa aagcaagtgc tgtgaaaatt aaaatagcta
    18301 aaataaagtt aaaaagcggt ccagcaaaaa tggtcattgc ccggtttcct aatgatttag
    18361 cattaaaaga acggtcatat ggcgtaatca tcgtttcgat tttaccatca atcactaagg
    18421 catcacgctc tacctgatag cgaactttct tggtgtcatc gtaatcttcg tagccttcaa
    18481 tgaaaagttc tttctctaaa tcacagagag aaacttctat tggctgcgcg tttacatatt
    18541 gatctttacc attaacaatg attttgctaa ccgtttcttc cggagttaat tctagcccta
    18601 ctcggtaacc aggttttagc tcgatttcct cgccatcttc cccagccatc cgaacgtaac
    18661 caccaatcgg caataagcga atcgtatatt gcgtttcttt tttacgataa gcaaaaattt
    18721 tcggtccaaa accaattgaa aagtctttta ccataattcc agcacgtttt gcaaaaagaa
    18781 aatgtcctag ttcatggaaa aatacaatca gtccgaatac gaaaataaaa gcaataatag
    18841 ttgtcaaaat agcttcacct ctataaaagt gtctttacat acgcgcgtgt ttcttgatcg
    18901 acttgtaaaa tggtatccaa gtcagggtca gaaatgctag tatgacgatt cattgcattc
    18961 tcaacaagtg cttcaatatt ataaaaagcc acctgtccat ttaaaaagcc agccacagca
    19021 atttcatttg ccgcatttaa aactgtcggc attgttccac ctattttacc agcattatac
    19081 gcgagtttca atgccggaaa tctttcataa tccacttttt caaaatgaag tgcggaaaaa
    19141 tcagtaatcc ggaattcttt ttcatacggt atataaagtc tgtcgggata ggttaaagcg
    19201 tattgaattg gcatccgcat atctggtgta ccaagttgcg caatgaaact tccatccacg
    19261 aactgaacca tagaatggat aatactttcg cgctgtataa cgacttctat atcatcgtag
    19321 tccacaccaa acagccagtg cgcctccatc acttctaaac ccttgttaaa catcgtcgct
    19381 gaatcaattg ttaatttatt ccccatattc cagttcggat gttttaacgc ttctttcacc
    19441 gtaacctcgc tgagttgttc cctcgtctta tctcggaaac ttccaccgct cgctgtcaaa
    19501 actagttttt cgattctttc cgtattttct ccgtttaatg cttgtaaaat agcagaatgt
    19561 tcgctatcaa caggtaatag tgaaatgttt ttttctttcg ccgcacgcat gactaaatgt
    19621 ccagccgtaa caagcgtttc tttattagca attgcaatgg ccttcccagc ttcgattgca
    19681 tctaatgtcg gaagtaagcc aacgctcccc ataactgcat ttaaaagcac atctccatct
    19741 aaataggtcg ctacttctct aagcccttct aaaccattaa aaaatttcac gtttgggaat
    19801 tctgcttcta atatcacacg atctctcgta tgccaaacag cgaccatttt gggtttaaat
    19861 tcttttataa tcgccctacc acgttccata ttacgcccaa aactaagcgc aacaatttga
    19921 aatttttcag ggttttcgcg aatgattgca agcgtttgtg ttccaataga accagttgca
    19981 cctagcaaaa taattttttt cattatccca tctccaatta aataatttga agtatatgta
    20041 gcagaggtaa aacgaacaac aagctatcaa agcggtctaa aataccacca tgccctggta
    20101 agattttccc agaatctttt acaccataaa agcgtttcaa agcagattcg accaagtctc
    20161 ccaactgtcc aaaaatagaa agaaaaacta aaagcgctag tacgagtgca atatttcctg
    20221 gtagctcagc aaaataataa aagcccccag caatgacaag tgcacataca atcccgccga
    20281 taaacccttc caccgttttg tttgggctaa cattcggagc taatttgtgt tttccaatcg
    20341 cttttccaat aaaataagcc cctgtatcag ttgaccaaac aataaataaa gcaaaaagta
    20401 catacattaa cccagcttca cgagttaatg ccaagtaatg gaaaccaaat cctgtataaa
    20461 aagcggcaac catacaaata ccaacttgat caaaatggaa tttatttcgt gaaaatacag
    20521 tattagcgag taataaagcc attaaaataa aaataacttc catttcagta atatgcagtg
    20581 tatctaaaaa gtccaaatat ctatctggca cgacaactaa ccacattaat agtaaagtaa
    20641 ttatcccatt catcgaaaaa attcgttgtt ttgtcattac aagtacttca tataaagcaa
    20701 tcgttgctag taaaatactt aatagttcaa atggaattcc tccgtagaca acgaatggaa
    20761 taaaaaatat aagcgcaaca actgcagtaa taattctcgt tttcaatctt ttttcctccc
    20821 tagagccctc caaaacgacg tgaccggttt tgatattcaa taattgcctg taaaaaatct
    20881 tcttttgaaa aatcaggcca atgtgtatcc gtaaaataaa actcactata cgccagttgc
    20941 caaagcataa aattacttaa tctaagctcc ccactcgtcc gaatcaacaa gtcaggatca
    21001 cccaaaccgc tactcatcaa atgatcattt aatttttctt ctgtcagatc atctgcactt
    21061 ttccctttaa gctctaattc tttcatcgct tctttggcag cagtaataat ttctgaacgt
    21121 ccaccgtagt taagtgcaaa gttaagcgta agccctgtgc aatgcgctgt atcagctatg
    21181 gctttctcta cggcacgcat cgtatgatta ggtaaatttt ctctgtaccc catcacatta
    21241 acacgaacat tttcttcaat caactctggt acaaaagagt caaaaaattc tacaggaagt
    21301 ttcattaaaa aatccacttc atctgtaggt ctcttccaat tttcagttga aaatgcataa
    21361 agcgttaaaa catcgatgcc aattgcatta gcataacgtg tcactcgctt tacgacatcc
    21421 ataccttctt tatgcccagc aatgcgcggc aaaaaacgtt tcttcgccca ccttccattc
    21481 ccatccatga taatagctac atggcgcggg ataggcaaat cttctgcaag ttcactattt
    21541 aatatatttt catcttgtcg aaatagcttt ttaaacatca taaatcctcc aattgataca
    21601 cttcttagag catgtctata cctataataa caaaaaagaa tcaattaatg tactaaaaat
    21661 tccatgtgaa cagatgagag tttcatgaga gcgatggaat tgcccattaa aaaacattcc
    21721 taacccaaca catatggaaa gaattaggaa tgtcgcttca acttaaaagg tgtttaaccc
    21781 tatttgttac tatttgtaaa agtatcaatt aaacttctaa gatttccgct tctttgtctt
    21841 tcgtgatgct atcgatgttc ttgatgcttt catctgttaa tttttgaacg tcttcaccat
    21901 aagaacgcaa atcatcttct gtgatgtcgc catttttttc tagttttttc aattcttcat
    21961 tagcttcacg acgaatgtta cggacagcaa ctttcgcttc ttcagcttct tttttcactt
    22021 ctttaaccaa ctctttacga cgttcttccg ttaattgtgg aatagataaa cgtagtacag
    22081 aaccatcatt atttggagtc aaacctaaat ccgatttcaa aattgctttt tcaatttcac
    22141 ctaaaatagt tttatcgtaa ggtgtaatta gtaacattct agcttcagga acgctgatag
    22201 aagccatttg gttcactgga gtagctgctc cgtaataatc tacagataaa cggtcaagta
    22261 gtgatgcatt cgcacgacca gcgcggattg tacctaattg tcttgttaat gcttgttctg
    22321 ctttttccat tttttctttg gatttcgata atacttcttt actcattatt ttttccccct
    22381 aacagtagtc ccgatttttt cacctaaaat aacacgttta atattattgc cttgttctgt
    22441 aaacgagaag acgattaatg gaatatcgtt gtccatactt agagaggacg cagttgtatc
    22501 cataacttcc aatccttctt taatcacatc aaggtaagat aactcttcgt attttttcgc
    22561 attttcatct agttttggat cagcattgta gacaccatct acattatttt tcgccattaa
    22621 gataacatct gcttcgattt cagccgctct aagtgctgcc gctgtatctg tggagaagta
    22681 tgggttacct gttccacctg caaaaataac gacgcgacct ttttcaaggt ggcgaatcgc
    22741 ttttcgacga atgtacggct cagcaatttg acgcatgtca atggaagttt gtacacgcgt
    22801 tgctactcca atgttttcaa gggaatcttg taaagacaag gaattcatga tagtcgcaag
    22861 catacccatt tggtcggccg ctgcacggtc cattcccatt tcactaccaa gtttaccgcg
    22921 ccagatattc ccgccgccaa caacgatagc tacctctact cctagttcta ctacttcttt
    22981 gatttgagca gaaatcaaat tgaccacgct cggattaatt ccaaagccat catttccggc
    23041 aagtgcttca ccgcttaatt ttaatacaac tcgtttataa tctggggtat ccataatagc
    23101 ctccattttc atattctatt catagataga agagttttcc atccaccatt atctattcta
    23161 ctaaaaagct ggctattaca aaagtgtttt ctaccaaaaa ataaaaaaac atttaaattt
    23221 actcctagtc ttcctttttt tat
//
LOCUS       DASDYK010000034        22923 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.034, whole genome shotgun sequence.
ACCESSION   DASDYK010000034 DASDYK010000000
VERSION     DASDYK010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 22923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22923
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.034"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..485
                     /locus_tag="U0308_001331"
     CDS             <1..485
                     /locus_tag="U0308_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316298.1"
                     /translation="VTVLSYYLENPKQFGKMLDLSAQNSFSIRPFEMGNFEKATGYKF
                     KEKTHFFSIYSDVKEKLAPAKFTFLILWALVFLICYGVSAFKHFREKNIRGMLLFDLV
                     ILLIGSGFAVILVTIVGDGEADLTKHNFLFNVCFDLTMLIGAASLLEVYMKKRGERNA
                     "
     gene            478..1974
                     /locus_tag="U0308_001332"
     CDS             478..1974
                     /locus_tag="U0308_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316299.1"
                     /translation="MRKKLIVSILLAFMIFVVGGHSAIAKTDDGVVVFYDSLATGTEN
                     EGNMDALLRMLNSLGKRVTIYSWEENPDLSQTSEIIVLQNKKDGLASDWTEKLAKSKA
                     KIAYIGGNPPTFLTDKLQLKTKAITEASITIQTQAGLSGKPQLVNETNLITSYKGTSF
                     GEMDAAENGQAAYGVQAGNYAYAPLFQADNTSEFALMDVLKALFDIKTTTNQYAFITG
                     VNPFIDFDLLKKTADTFYEKGIPFIVSAGPVFYNQDFQAAKNYAEILRYVQAKNGTIM
                     MNVPAVTYGDSPAGELEKIMQKSVHFFAENDVAPLGVTAELYWNFDKVYGVEGFAPFN
                     TGILLPNQKIIHTTKVNNGSAFEKSPYSVANDFYATTTEGRTFPVDIAITYPFFDNEK
                     ELKAAAEELANDNISDFRFQDHGVKTNKDTIESSAGSLYINNQSVTLDGDLNYIKTKN
                     KTVKQAGSLEGFFGYQNTFFTIVIVLSLGIIGVLFVFGYRLYMKKYMK"
     gene            1985..3235
                     /locus_tag="U0308_001333"
     CDS             1985..3235
                     /locus_tag="U0308_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM2316300.1"
                     /translation="MVIADYLALFAVVCIWGLLLINIVLIVAGYVYYLKNEARKVPEI
                     PAEVPFVSVMVPAHNEGKVIVKTVESLLAFDYPVDRYEIIVINDNSSDNSAELLAAIQ
                     AKNPTRFLKIINTDNITGGKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGE
                     ITNDAKLGAVIGKFRTRNRNASWLTRFINIETLSFQWMAQAGRWALFKLCTIPGTNFI
                     VRRSLLEEIGGWDVKAVAEDTEISFRIYMMGYRIKFQAKAVTWEQEPQTLPVWFKQRS
                     RWAKGNIYVILKNVPLLFKREGRRVRFDILYFLSIYFLLLTSLIVSDVLLVLYALGLV
                     HTTLAGLSGALWLLAILLFVAGTFITLTTEKGEISFSNLLFIMLMYVTYCQLWMVVAA
                     YGFFIFLKDTVLKRETKWYKTERF"
     gene            3251..5302
                     /locus_tag="U0308_001334"
     CDS             3251..5302
                     /locus_tag="U0308_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis cyclic di-GMP-binding
                     regulatory protein BcsB"
                     /protein_id="HEM2316301.1"
                     /translation="MKKLTVIGLLMFAVLFLYRPDVLAADKNYQTVFGTDKTAQGKFT
                     TTKQNFTVENYWDVSNANVKLVYTITQLSEKEVSTMTLKINDVAFYSFKPDKADKGTK
                     QIEIQIPKDKLKKGVNVLSIESFVYTDLPDGRCTIDDTPANWLQFDKTSAVNVSYSDK
                     AFQKTIAEFGERFTGIDIVKSEQGAVAVSNKAGDAELGAALEGLSGFSAANTLEDKNI
                     AFGQYEEAKTRDGKNYLVLFSSYDNLPNDLKSQIKDDNKLEKQALFQVVTVGNTNTLV
                     VTSKSNDALKKAGKLIANQNYLSQLGTNTKWLTTDEKIDTPATNVDKNTKLTTTGDKL
                     KGIGHITQDYFISMPANRSASTGTEVSLDFRYAQNLDFEHSLVTILVNGKPIGSQKLT
                     AKKANGDKLTFQIPSDLNVKGDFSVTVAFDLVLTNNYCGFIADSEIPWAYITPESKIN
                     LNTSEETDLLFEQYPYPFIANGDFNNAVVVVPDKLTTEDTDSLANIFNLLGRFHDGNR
                     GDLTAVHAANWKKPKEGSNIVAVGTMNNNPVIKNANDDLYFQYNKTGDYFLSNEKISI
                     EKNYGKQLGSVQLITSDGVPILAVTGPGAKQTELGSDLIATKANLAKIYGDGAIVDTD
                     NTIHSYRFKKAADTQEESFGSKISNNKEVTVFGAFALLTVVILVVAVLLILRKYRRSR
                     K"
     gene            5317..6171
                     /locus_tag="U0308_001335"
     CDS             5317..6171
                     /locus_tag="U0308_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEM2316302.1"
                     /translation="MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNI
                     TFLLVIITYFTNLTLGLILNVLYIFIYATYIIYEIVANQIAYGFGSYFWLIITPLFTV
                     ASAMFTRNTSRLQEENTKIKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLP
                     LSLMVIKVRHWRELKRFQSEEEMRLALQDISAILETCIRTSDVLYLLDKDDATWGLLL
                     LTDEPGGKLVADRIKSRIAEANTEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLA
                     TKELEYDV"
     gene            6231..7061
                     /locus_tag="U0308_001336"
     CDS             6231..7061
                     /locus_tag="U0308_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2316303.1"
                     /translation="MNLEEIVDCMLLNENDKEIQRTQTEHRIKLVDFWQVKNGDRVLE
                     VGCGQGDTTAVLANAVGASGFVQGIDIAPRTYGAPFTIGDATDHLQKSKLGAQIDFKL
                     GTDILNGDITFPENAFDVAVLSHASWYFSSKSELTMMLELLSKWAKRVCYAEWDTRIT
                     DVKQTSHMLAVLTQSSYEAFKQDTQSNIRTFITPIDMQEIIQEHNWKMGAETSIFSEK
                     MQDSRWEIGYVKDFITKELEADLGLPEKFKAFLLSQSKLITLENSLPMASYCTSWQVK
                     "
     gene            7139..7408
                     /locus_tag="U0308_001337"
     CDS             7139..7408
                     /locus_tag="U0308_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEM2316304.1"
                     /translation="MRAVLTVIGKDNVGIVAGVSNKLAELNINIVDVSQTIMDGYFTM
                     MMMCDISQITKEFDEVKAELAGKGEDLQVKIHIQREEIFNAMHKL"
     gene            7427..8782
                     /locus_tag="U0308_001338"
     CDS             7427..8782
                     /locus_tag="U0308_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HEM2316305.1"
                     /translation="METNQILETIRMIEEEKLDIRTITMGISLLDCMDGDGEVARKKI
                     YQKIVTKARNLVAVGEAIESEFGIPIINKRISVTPIAIIAGSSADTDYVEFAKTLDAA
                     AKEVGVNFIGGYSALVQKGYTKGDEILIRSIPQALAQTERVCSSVNVGSTRTGINMDA
                     VRQMGEVIKETADLTADTQGLGCAKLVVFANAVEDNPFMAGAFHGVGEADCVINVGVS
                     GPGVVKRAIEKVKGEPFDIVAETVKQTAFKITRMGQLVGQVASEKLGVPFGIVDLSLA
                     PTPAIGDSVAHILEEMGLEMVGTHGTTAALALLNDAVKKGGVMACGHVGGLSGAFIPV
                     SEDAGMIEAVQQGALNLEKLEAMTAICSVGLDMIAVPGDTTAETLAAMIADEAAIGVI
                     NNKTTAVRVIPASGTKVGDMVEFGGLLGTAPVMPVNGKSSVDFIARGGRIPAPIHSFK
                     N"
     gene            complement(8822..9790)
                     /locus_tag="U0308_001339"
     CDS             complement(8822..9790)
                     /locus_tag="U0308_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2316306.1"
                     /translation="MANIQEIAKLAGVSSATVSRVINKRDYVSDETRKRVQTIIDQLD
                     YVPNINAVSLKKGATKLIGMVIPSFTDSLNVFLKSFTMIAQEHGYNVTLFMTRIDPDK
                     ELEALEMLRQKQIDALVLVIRSNDWKTIEHYTKYGPIVTWQRVESEKIPSVFMNQYDG
                     YTLALEHLYAKGYRKFVNVYGNTTGLNTQSRMLAFKDFCARYELDPHEFRQFYGQGSR
                     QDGEKIAHWFAETEHKPDAFLTPNDYFAAGLLTEARRLGYSVPEDFAICGFDNMEIAH
                     LLDITTIHYPVNLQAENAFTLIMNQLFGSNLPLLDLDFHLVERKTT"
     gene            9962..11284
                     /locus_tag="U0308_001340"
     CDS             9962..11284
                     /locus_tag="U0308_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEM2316307.1"
                     /translation="MKKGVKIVTIGGGSSYTPELVEGFIKRYHELPIRELWLVDIEAG
                     REKLEIVGNMAKRMVKAANIDCEVHLTLDRREALKDADFVTTQFRVGLLDARIKDERI
                     PLSHGIIGQETNGAGGMFKAFRTIPVILGIVEDMRELCPDAWLINFTNPAGMVTEAVL
                     RYGNWDKVIGLCNVPIGAVKSASDVLEKPEEDLFFKFAGINHLHWHRVFDKDGTELTE
                     KVIDGLYAPDANPGKVVENIKNMRFLYEQVKHLKMLPCPYHRYYYMTDAMLEEELASF
                     KNEGTRGEVVKKLEDSLFELYKDPNLDYKPEELSKRGGAHYSDAACEIINSIYNNKGT
                     VMVVSTRNNGAIDDVPYDSAVEITSVIRAHGAEPINFGKFPPAQRGLLQVMKSMEELT
                     IEAAVTGDYATALQAFTSNPLVPSGDLAKTILDEMLEAHKEFLPQFAK"
     gene            11388..12659
                     /locus_tag="U0308_001341"
     CDS             11388..12659
                     /locus_tag="U0308_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent hydrolase"
                     /protein_id="HEM2316308.1"
                     /translation="MQTNLERIKKHIEKLDTYTATPGQGTTRLTYSKEDLDARNYLKQ
                     EMAKVGLAVSEDAIGNIYGRLEGENPKLPAVIVGSHFDSVPNGGAFDGPAGVITGLEV
                     ATVFYEQQIKPHFPLEIIAMVEEEGARFGAGLLASRTITGKVTKEMLHEMKDIDGITA
                     AEAMAKVGFDANQVVTAIRTKESVKAFIELHIEQGPVLENANEDVALVDTVVGLTEIK
                     VTVKGQAGHAGTTPMLDRKDALITAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGAN
                     VIPDKVVFTVDIRAKDEIHVQNTLAKTKEIIQSAEKNGITCEIEDMLYEPPTHLSKEI
                     HQALTESADQLGLKYRTMVSGAGHDAMIFASLTEVGLIFVPSHNGISHAPEEWTDYDK
                     LQKGIEVVLKTVKKWTEESANESENKTSSFK"
     gene            12625..13800
                     /locus_tag="U0308_001342"
     CDS             12625..13800
                     /locus_tag="U0308_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014600561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEM2316309.1"
                     /translation="MNQKIKQAVLNNEEAMIAFRRDLHMHPELQWQEFRTTDKVAKEL
                     DKLGIPYRRTEPTGLIAELKGGKSGKTVALRADMDALPVQELNQDLPYKSTEDGKMHA
                     CGHDAHTAMLITAAKALVEIKDELPGTVRFIFQPSEEIAEGAKAMIAQGAMEGVDHVF
                     GIHIWSQTPSGKISCVVGSTFASADIIQIDFKGQGGHGAMPHDTIDAAVIASSFVMNL
                     QSIVSRETDPLDPVVVTIGKMDVGTRYNVIAENARLEGTLRCFNNITRAKVAKSIEHY
                     AKQTAAIYGGKAEMIYKQGTQPVINDEKSALLVQETITESFGEEMLYFERPTTGGEDF
                     SYFQDEAPGSFALVGCGNPEKDTEWAHHHGRFNIDESVMKNGAELYAQFAYNYLNQN"
     gene            complement(13848..14864)
                     /locus_tag="U0308_001343"
     CDS             complement(13848..14864)
                     /locus_tag="U0308_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase"
                     /protein_id="HEM2316310.1"
                     /translation="MVQITKGKFDGLQRLSNEKGVIAALAIDQRGSLKKMIQQAKGTE
                     NKKDVEDFKQLVSEELTPYASAILLDLEYGTPAIKARHEGSGLLTSYEKTGYDATTPG
                     KLPDLIEDLSALRIKENGGDAVKILVYYDPDEPAEINEIKYAFLERIGAECRAVDIPF
                     FLEPITYDATVTDSGSLEYAKLKPAKVKASIKEFSKPRYGVDVLKLEVPVNFKYVEGF
                     AEGEVAYTQDEAARHFEECSDLSPLPFIYLSAGVTSEMFHKTIQFANQHNVQYSGVLC
                     GRATWADGIEVYGKQGDDALREWLRTQGKENITSLDKLLDEGAVPWWTKYGSFEDVHV
                     VEKQ"
     gene            15101..16294
                     /locus_tag="U0308_001344"
     CDS             15101..16294
                     /locus_tag="U0308_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEM2316311.1"
                     /translation="MNRRERRKHKRRKNMIIVLSTVFLLFIATSWMIYEFKSKQEQTV
                     SAPTKKKAATATNPPENAATNEPEETKEPEPVEEKPKETIVKNQEIDNYLQKIGFSGS
                     ALVVRDGETIIQKGYMYANRDEKVLNTPDTLFYIGSSQKAIIATALLQLEEKGKINTN
                     DPISKYIPDFPNGNKILVKNFMNHTSGIVGRPKLTSNMTPDQIIKAIEKRGIKSQPGK
                     WDYLDANYAVVGYLVEKVSGQPLATYLQENIFTPAGMKHTGYYQKDVDGGKNVSTGYK
                     IDENGVFQSPKLADLTKLYGAGDISMSTTDMYLFDKALMDKKLISEASLKKMFTSGSK
                     STYGMGFYVDPGSYNSHGVVTGWDVSNSVSHTGRTYVILFSNVQNHIASFGKVNNDIY
                     GFLNK"
     gene            complement(16335..17255)
                     /locus_tag="U0308_001345"
     CDS             complement(16335..17255)
                     /locus_tag="U0308_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM2316312.1"
                     /translation="MYQKHKWAAILMTVLLAVVLTACGSSSDKDSSKEKESATKTVTD
                     TMDRKVEVPTTPKRIVALQNVSEMEILGVKPVGTTDYYITTYPEATKGTESVGNDKPS
                     IEKIANLKPDLIIISDYQKDLLENLEKVAPVYITHFGDTPDKQLSNIANLLNKKAEKE
                     KWDKDYAASSKEAKATLKDAGVANEKAAVIQFYGKEIYVHDAKVFDGLYSGAGFTPTD
                     AAKANKETKAISSEAIPEYAAGADRLFILMPADGNTDSVDEMLKGVWKDIPAVKKNQV
                     YKVDNTKWSDYSASAQLYQMEDAVKQITGK"
     gene            complement(17366..17716)
                     /locus_tag="U0308_001346"
     CDS             complement(17366..17716)
                     /locus_tag="U0308_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HEM2316313.1"
                     /translation="MTISKIMEIGPLVPAFEEEKIVILFGPTATNELREISVIHEFQD
                     VPNNALTKGNTLLIGEQAYTIEEVGSDANKNLEELGHISVYFRSGQNEVLPGAIVVSP
                     EIFPTITVGDSIQF"
     gene            complement(17735..18721)
                     /locus_tag="U0308_001347"
     CDS             complement(17735..18721)
                     /locus_tag="U0308_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HEM2316314.1"
                     /translation="MYQSIHVNKGQGGWGVGLDITPSEPRTKVVSITGGGIHPVALKI
                     AELSGAEAVDGFKNSIPEEEMMCVVIDCGGTARIGVYPMKRIPTVDVLPSSPSGPLAK
                     HITEDIFVSGVKPEDIEVRDRSTEPGKPFDREKFKEDYAKIKEDQEEASQLKEGFLVK
                     FSRGIGKAMGVFYQAGRDSVDMLIKNIIPFMAFISMIIGIINYTGIGKLIANTLSPLA
                     GSLWGMLLIAFICSLPFLSPILGPGAVIAQVIGVLIGSQIAIGAIPVTYALPALFAIN
                     AQAGCDFIPVGLSLAEAKPKTVQFGVPAILYSRMITGVLAVVIAWVFSIGMY"
     gene            complement(18742..19263)
                     /locus_tag="U0308_001348"
     CDS             complement(18742..19263)
                     /locus_tag="U0308_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HEM2316315.1"
                     /translation="MNYIEWFGTNFIGLFEAGGKQFVSFMTGIVPLLIVLLTFTYSII
                     AFIGEERVNRAIQFSAKNMILRYTLMPVLSVLMLTNPMAYTFGRFVKEHQKPAFYDSV
                     VSFLHPVTGLFPYANAGELFVYLGIANGVVEAGYSMSSLAVRYFLAGIVVILMRGVIT
                     ESITKFLMRKEKV"
     gene            complement(19288..19668)
                     /locus_tag="U0308_001349"
     CDS             complement(19288..19668)
                     /locus_tag="U0308_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
                     /protein_id="HEM2316316.1"
                     /translation="MNIVLIASLIFIAQTGLAFFQVRYYQHHMNKVADKYAGKTGYYL
                     YSEMERLKFRTSAVAILVVNENRVVHECQILTGKTVFAKFKTFTNYHHKDLSEILTDL
                     SSKNKNTIQEKAIIKTVNSCMKAL"
     gene            complement(19723..20973)
                     /locus_tag="U0308_001350"
     CDS             complement(19723..20973)
                     /locus_tag="U0308_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEM2316317.1"
                     /translation="MTLYRQLLARENENNPIRVGVIGAGQMGFGMISQIAAIPGMSIV
                     GISDIHVEAAQKAADAYNATATKKEKILLSNDFKEIIHSDLVEVIVDATGVPEVGAKI
                     SLETLLAKKQLVLLNVEIDITIGPLMKKLYDSAGLVYTGSDGDEPAAITELYEFSKSM
                     GMEVLVAGKGKNNKLKISANPDSCQAEADGKNMASHMLAAFQDGTKTMAEMNLLSNAI
                     GYVPDVVGMHGISGDVDSVIKDLDLKDQGGILNKFGVVEYVDGLAPGVFVIVKGQNEG
                     VSHELSYLMKKGDRDHHILYRPYHLASLETPLTIAKAVLNHDHAIVPMGAPVSETVAV
                     AKKDIAAGEKLDGIGGFCVRGVLETHVDMATNGHIPIGLISGEVVARRNIKAGTFITD
                     EDVSLDESTTVWKLRKLQDETFNK"
     gene            complement(21231..22178)
                     /locus_tag="U0308_001351"
     CDS             complement(21231..22178)
                     /locus_tag="U0308_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HEM2316318.1"
                     /translation="MKWEEKRDMVKIATWYYHYGWTQAQIAKKIGISRSIISKTLQRA
                     KDLGIVEIFIKDETYYTVDLEQKLEEKFGLEEAIVVATHDMSEEEALNFLAKEAAYTL
                     SKRIAKVKTLGISWGKTIRKFANEFPFIPHKDLTIIPLIGGMGSSDIDLHSNQICYDL
                     KKKMKCHSKYLYAPALVEDTEMKTDLSKNKYISEVLEEGKTVDMAIVGVSSPYNHSTM
                     EEIGYINSEDIEELRYKDVVGDINSRFFTADGKEAKTEINTHVIGLSLEELKNIPTVV
                     ALANGLQKKEALVAALNAGLIDVIVITDRMAEYILQKND"
     gene            22546..>22923
                     /locus_tag="U0308_001352"
     CDS             22546..>22923
                     /locus_tag="U0308_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2316319.1"
                     /translation="MEKLFTYKEFVDMMQKYGIRHTKRKLRRGENLMENASKFSNVVL
                     LIDGYISSYTYESPEKLLSIFEPGIFLRYSILEDQPEFVTNIALSDNCEVYEYKKEDI
                     EYALTLFPENFGFQYFFLKRIGRH"
BASE COUNT         7320 a         4389 c         4578 g         6636 t
ORIGIN      
        1 ttgttacggt tttgagttat tacttggaaa atccgaaaca atttgggaaa atgctagatt
       61 tatctgcgca aaatagtttt tcgattcgtc catttgagat ggggaatttt gaaaaggcga
      121 cagggtataa atttaaagag aaaacgcatt ttttctccat ctatagtgat gtaaaagaaa
      181 aattggctcc agcgaaattt acgtttttaa ttttatgggc gcttgttttt ctaatttgtt
      241 atggggtgag tgcttttaaa catttccggg agaaaaatat tcgtggaatg cttttatttg
      301 atttagttat tttgctgatt ggttctgggt ttgcggtgat tttagtgacg atagttggcg
      361 acggggaagc ggatttaacg aaacataatt tcttatttaa tgtgtgcttt gatttgacga
      421 tgttaattgg agcggcttct ctgctggaag tttacatgaa gaagagaggt gagcggaatg
      481 cgtaaaaaac tgattgtaag tattctgcta gcattcatga ttttcgttgt tggcgggcat
      541 tccgcaattg caaaaacgga tgacggtgtc gttgtttttt atgatagttt ggcgacaggt
      601 acagagaatg aaggcaatat ggatgcgcta cttcgaatgt taaatagctt gggcaaacga
      661 gtgacgattt attcttggga ggaaaatcct gatttaagtc aaacaagcga aattattgta
      721 cttcaaaata aaaaagatgg cttagcaagt gattggacgg aaaaattagc caaaagcaaa
      781 gcgaaaatag catacatagg cggaaatccc ccaacatttt taacggataa attgcaactg
      841 aaaactaaag caattacaga ggcttctatc acaattcaaa cgcaagctgg attgtctgga
      901 aaaccacagc tggtgaacga aacaaatcta attacttcct ataaaggaac aagctttggt
      961 gaaatggacg cagctgaaaa tggacaagct gcatacggcg ttcaagcagg aaattacgcg
     1021 tacgcacctc tttttcaagc agataatacg agtgaatttg ctctaatgga cgtactcaaa
     1081 gcattattcg atattaaaac gaccaccaac caatatgcgt ttattacggg cgtaaatcct
     1141 tttattgatt tcgatttgct caaaaaaacg gcagatactt tttatgaaaa aggaattccg
     1201 tttatcgtga gtgcggggcc tgttttttac aatcaagatt tccaagcggc gaaaaattat
     1261 gcggagattt tgcgctacgt tcaagcaaaa aacggcacga ttatgatgaa cgttccagca
     1321 gtgacgtacg gagatagtcc agcgggagaa cttgaaaaga ttatgcaaaa atcggtacat
     1381 ttcttcgcgg aaaatgacgt cgcaccgctt ggagttacag cagaactgta ctggaacttt
     1441 gataaagtat atggcgtaga aggtttcgca ccgtttaata ccgggatttt gctaccaaat
     1501 caaaaaatca tccatacgac gaaagtaaat aatggcagtg catttgaaaa gtctccgtat
     1561 agcgtggcga acgattttta tgcgactacg actgaaggga gaaccttccc ggtcgatatc
     1621 gcgataacct atcccttctt tgataacgag aaagaattaa aagcagctgc tgaggaacta
     1681 gcgaacgaca atattagtga ttttagattc caagatcatg gggtaaaaac aaataaggat
     1741 acgattgaat cgagtgcagg ctcactttat atcaataatc aatccgttac gctcgatggc
     1801 gatttaaact atattaaaac gaaaaataaa acagtcaaac aggcgggcag tttagaaggg
     1861 ttcttcggct atcaaaacac ctttttcacg atagtaattg tactttcact tggcattatt
     1921 ggggttttat ttgtctttgg ataccggctt tacatgaaaa aatatatgaa atgaggtgaa
     1981 ataaatggtt attgcagatt atttagcatt attcgcggtg gtgtgtattt ggggactttt
     2041 gctaattaat atagtgttaa ttgttgcagg atatgtttat tatttgaaaa atgaagcgcg
     2101 aaaagtgccc gaaataccag cggaagtacc atttgtttct gtcatggtgc cggcccataa
     2161 tgaagggaaa gtaatcgtga aaacagttga atcactgctt gcttttgatt atccggtcga
     2221 tcgttacgaa atcattgtca ttaatgataa ttcttcagat aatagcgcgg aacttttagc
     2281 cgccattcaa gcaaaaaatc cgacacgctt tttaaaaatt attaataccg ataatattac
     2341 aggcggaaaa ggaaaatcga atgcgctcaa tattgggttt gcggaaagtc gtggggaact
     2401 ggtggcgatt tatgatgctg ataatacacc ggaacggcaa gcgctaagaa tccttgttgg
     2461 tgagattaca aatgatgcga aacttggtgc agtcatcggt aaattcagaa cccgaaatcg
     2521 aaatgcaagc tggttaacgc gatttatcaa tattgaaacg cttagttttc agtggatggc
     2581 tcaggccggc agatgggccc ttttcaaact atgcaccatt cctggtacta attttattgt
     2641 gagaaggtcg ctcctagaag aaatcggggg ctgggatgtg aaagctgtcg cggaagatac
     2701 cgagattagc tttcggattt acatgatggg ttaccgaatc aaattccaag cgaaggctgt
     2761 tacgtgggaa caagagccgc aaacattacc agtttggttc aaacagcgct caagatgggc
     2821 gaaaggcaat atttatgtaa ttttaaaaaa cgttccactc cttttcaaac gagaaggtag
     2881 gcgcgttcgc tttgatattt tatacttttt atcgatttac tttttattat taacttcctt
     2941 gattgttagt gatgttttac tcgtattata tgcgctggga cttgtacata caacgcttgc
     3001 tggccttagc ggggcgcttt ggttgctagc cattttactt tttgtcgcag gtacttttat
     3061 tacactcacc acggaaaaag gcgaaatcag tttttcaaat ttgttattta ttatgttgat
     3121 gtatgtgacg tattgccagc tttggatggt ggtcgccgca tatggattct ttattttctt
     3181 aaaagatacc gtactaaaaa gggaaaccaa atggtataaa accgagcgtt tctaaaaagg
     3241 agagtgccta atgaaaaaat taactgtaat cgggctgctt atgttcgccg tactatttct
     3301 gtataggcca gacgttctcg cagcagataa aaactatcaa acggtttttg gaacagataa
     3361 aaccgcccaa ggaaaattca caaccaccaa acaaaacttc acggtggaaa actactggga
     3421 tgtatcaaac gctaacgtaa agcttgtgta tacaattacc caactgagcg aaaaagaagt
     3481 ttccacgatg acactgaaaa taaacgatgt tgcgttctac tcttttaaac cagataaagc
     3541 agacaaagga acaaaacaga ttgaaatcca aattccgaaa gataagttaa aaaaaggagt
     3601 caatgttcta tccatcgaaa gctttgtcta cactgatttg cctgatggtc gttgtacgat
     3661 tgacgataca cctgccaact ggctgcaatt cgataaaaca agcgcagtaa acgtatctta
     3721 ttccgataag gctttccaaa aaacgattgc cgagtttggc gagcgcttca ctggaattga
     3781 tattgtgaaa agtgaacaag gcgcagtagc tgtctcaaac aaagccggcg atgccgaact
     3841 tggcgcagca cttgaagggc tttccggatt ttctgcagcg aatacgttag aagataaaaa
     3901 tatcgctttt ggtcaatacg aggaagcaaa aacgcgtgac ggtaaaaact atctcgtact
     3961 tttttcaagc tatgacaatt taccaaatga tcttaaatca caaataaaag atgataataa
     4021 attagaaaaa caagcacttt tccaagtagt gacagtcgga aatacgaata cactcgtggt
     4081 tacttctaaa tccaacgacg cactaaaaaa agctggcaaa ctaatcgcca accaaaatta
     4141 cttaagtcag cttggaacaa atactaaatg gctaacaaca gacgaaaaaa tcgacacacc
     4201 agcgactaat gttgacaaaa atacgaaact aacaacaact ggcgataaac taaaaggcat
     4261 tgggcatatc acacaagatt actttatcag catgccagcc aaccgtagcg catcaacagg
     4321 aacagaagta tcacttgatt ttaggtatgc gcaaaacttg gatttcgagc attcattagt
     4381 aacgatttta gtgaacggaa aaccaatcgg cagccaaaaa cttaccgcta aaaaagccaa
     4441 tggcgacaaa ttaacgttcc aaattccgag cgatttaaac gtaaaagggg atttttcagt
     4501 taccgttgcc tttgatttag ttttaacaaa taactattgt ggctttattg cagattctga
     4561 aatcccgtgg gcgtatatca ccccagaatc aaaaatcaat ttaaacacaa gcgaagaaac
     4621 agacttgctt tttgaacaat atccgtaccc atttattgca aatggtgact ttaacaatgc
     4681 agttgtcgtt gttcctgata aattaacgac agaagataca gattcattag caaatatttt
     4741 caatctgtta ggccgcttcc atgatggaaa taggggagat ttaacggcgg tacatgccgc
     4801 caactggaaa aaaccaaaag aaggatcgaa cattgttgca gttggtacaa tgaataataa
     4861 tccagtaatt aaaaacgcca atgacgatct atattttcag tacaacaaaa caggcgatta
     4921 cttcctttcc aatgaaaaaa tctcgattga aaaaaattac ggcaaacaac ttggtagtgt
     4981 gcagttaatt acatcagatg gcgtcccaat tctggcagtt actggtccag gtgccaaaca
     5041 aacagaactc ggatcggatt taatcgcaac aaaagcgaac ctagctaaaa tttacggaga
     5101 tggcgccatt gttgatactg ataacacgat acattcctac cgattcaaaa aagcagcaga
     5161 tacacaggaa gaaagctttg ggtcaaaaat cagtaataac aaagaagtca ctgtgttcgg
     5221 agcattcgcg cttctaaccg tcgttatctt agttgtcgct gtcctactaa tcttgcgtaa
     5281 atatcgccgg agccggaagt gagggagaaa taaaaaatga aaaaaataac gaataactta
     5341 tttgcagata tcggcttttt atttttcatc ttgctttgtt tcatcacaat tggctttatg
     5401 atcaatacgc cggatgaata tttgcgaaac attattttat taaatatcac ctttttactt
     5461 gtgattatca cctattttac gaacttaacg cttggtttga ttttaaatgt cctctacatt
     5521 tttatttatg caacttatat tatttatgaa attgtcgcaa atcaaatcgc ctatggtttt
     5581 ggtagctact tctggcttat aatcacgccc cttttcacag tagctagtgc gatgtttaca
     5641 agaaatacgt caaggcttca agaagagaac acgaaaatca aacagcaaaa tctatattta
     5701 ggaacgattg accaagaaac tttgcttaaa aatatcgttt cattccaaaa tgacgagcga
     5761 attttttcca gtatttcgcg ccgttatgat ttacctttat cactgatggt tatcaaagta
     5821 cgtcactggc gcgagttgaa acgattccaa agcgaagaag agatgcgcct agcgttacaa
     5881 gatatttcag cgattttaga gacttgtatt cgcacgagtg atgtccttta cttattagat
     5941 aaagatgatg cgacttgggg actcttgtta ctaactgacg aaccgggtgg gaaattagtt
     6001 gcggatcgaa ttaaaagccg tatagctgaa gccaacaccg aagaatttgc cgcgaagtac
     6061 cgtgtgaagc tagaacttcg aattggaaca agccaatttg atagcgaaaa agtcaagaca
     6121 ccacttgatt ttatcgattt agcaacaaaa gaattagaat atgacgtgta aaatagagag
     6181 ttaccttcta taattaggag gtaactctca tttttgattg gaggaatacc atgaacttag
     6241 aagaaatagt cgattgtatg ctattaaacg aaaatgacaa agaaattcag cggacccaaa
     6301 cagagcaccg catcaaacta gttgattttt ggcaagtgaa aaatggggac cgagtgctgg
     6361 aggttggttg tgggcaaggc gatacgacag ccgtacttgc gaatgcagtt ggtgctagtg
     6421 gctttgtgca aggtattgat attgcaccgc ggacttatgg tgctccgttt accattggcg
     6481 atgcgacaga ccatttgcag aaatcaaagc ttggtgcgca aattgatttt aagctaggga
     6541 cagatatttt aaacggtgat atcacttttc cagaaaatgc ttttgatgta gccgttttat
     6601 cgcatgcttc gtggtatttt agttccaaaa gtgagctcac gatgatgctc gaattactaa
     6661 gcaagtgggc gaaacgcgtt tgttatgcgg aatgggatac gagaattacg gatgtaaaac
     6721 aaacgtcgca tatgttagct gtgctcaccc aatcatctta tgaagctttc aaacaagaca
     6781 cgcagtccaa tatccgaaca ttcattacac caatagatat gcaagaaatc atccaagagc
     6841 ataactggaa aatgggcgcg gaaacaagta tcttctcaga aaaaatgcaa gatagccgat
     6901 gggaaattgg ttatgtaaaa gattttatca caaaagaatt agaagcagat ttaggtttgc
     6961 cagaaaaatt taaagcattt ttactcagtc aaagtaaatt aattacgctt gaaaatagtt
     7021 tgccaatggc gtcatactgc acttcttggc aggtgaagta attttgcttt ctttttcaca
     7081 agatttagat tttttatgct ataatggaac gtattaacga actaaaggag tgttgaatgt
     7141 gagagctgta cttactgtaa ttggaaaaga taatgtgggt attgtcgcag gtgttagtaa
     7201 taaattagct gaactgaata tcaatattgt ggatgtatcc caaacgatta tggatggtta
     7261 ttttacgatg atgatgatgt gcgatattag ccaaatcacg aaagaatttg atgaagtaaa
     7321 ggcagaatta gccggtaaag gcgaggacct ccaagtaaaa atacatattc agcgggaaga
     7381 aattttcaac gcaatgcaca aactttagga tgggggcgat gctagtatgg aaacaaatca
     7441 aattttagaa actatacgaa tgattgaaga agaaaaattg gacatccgga cgattacaat
     7501 gggaatttct ttgctagatt gtatggacgg cgacggcgaa gtggctcgaa agaaaatcta
     7561 tcaaaaaatc gttaccaaag cgcgtaattt agttgcagtt ggtgaagcga ttgaatctga
     7621 gtttggcatt ccaattatta ataaacgaat ttctgtcact ccgattgcga ttatcgctgg
     7681 atcaagcgca gatactgact acgtagaatt tgcgaaaaca cttgatgctg ctgcaaaaga
     7741 ggttggcgtg aattttattg ggggctattc cgcactcgtt caaaaaggct acacgaaagg
     7801 tgacgaaatc ctgattcgct cgattccgca agcactcgca caaacggaac gcgtatgctc
     7861 atcggtcaat gttggctcga cgcgaacggg aatcaatatg gatgctgtcc gccaaatggg
     7921 cgaggtaatc aaagaaacgg cagacttaac agcagatacg caaggcctag gttgcgcgaa
     7981 actcgttgta tttgccaatg ctgtcgagga taatcctttt atggccggag cattccatgg
     8041 tgttggtgaa gcggactgcg ttatcaatgt tggtgtcagc ggcccaggtg tggtgaaacg
     8101 tgctattgaa aaagtaaaag gcgaaccgtt tgatatcgtt gctgaaacag tcaaacaaac
     8161 agcgtttaaa atcactagga tgggtcaact cgttggccaa gtcgcttccg aaaaactcgg
     8221 cgttcctttt gggattgtcg atttatcact tgcaccaact ccagcgattg gtgattcggt
     8281 cgcacacatt ttggaagaga tgggactaga aatggttgga acacatggca cgacagccgc
     8341 actcgcactt ttaaatgacg cagtgaaaaa aggcggcgta atggcttgtg gacatgtcgg
     8401 tggtttatca ggcgcattca ttcctgtttc tgaggatgcg ggtatgattg aagctgtgca
     8461 gcaaggggcg ctcaacctcg aaaaattaga agcaatgaca gcaatttgtt cggttggtct
     8521 ggatatgatt gccgtaccag gtgacacaac tgccgaaaca ttagcagcaa tgattgcgga
     8581 tgaagcggct attggcgtca ttaacaataa aacaactgct gtccgagtga ttccagcaag
     8641 tggcaccaaa gttggcgaca tggtcgaatt cggcggctta cttggcacgg caccagtaat
     8701 gccagtaaac ggaaaatcgt ctgtggactt cattgctcgc ggcggtcgaa tcccagcacc
     8761 aattcattct tttaaaaact aacgaaaaag gtttcctcca aatttgcgag gaaacctttt
     8821 attatgtcgt ttttcgttca actaaatgaa aatctaaatc aagcagtggc aaattgctac
     8881 caaataattg attcataatg agcgtaaaag cattttcagc ttgcaaattt accgggtagt
     8941 gaatcgttgt gatatcaagc aaatgcgcga tttccatatt atcgaaccca caaatcgcaa
     9001 aatcttccgg gacactgtaa ccaagccgtc ttgcttccgt caaaagccca gccgcaaaat
     9061 aatcattcgg tgtcaaaaag gcgtcaggtt tatgctctgt ttccgcaaac caatgcgcaa
     9121 tcttttcccc gtcttgccga gaaccttgcc cgtaaaactg tctaaactca tgcggatcaa
     9181 gctcataacg cgcacaaaag tctttaaaag caagcatgcg actttgcgta ttgagcccgg
     9241 tcgtattccc gtaaacattc acgaattttc gatatccttt tgcatataaa tgttctagtg
     9301 caagcgtata tccatcatat tggttcataa atacagaagg gattttttca ctttcgacac
     9361 gttgccaagt gacaatcggg ccatatttgg tgtaatgttc aatcgttttc caatcatttg
     9421 accgaatgac caggacgagc gcatcaattt gtttttggcg cagcatctct aaggcctcta
     9481 gttctttatc tggatcaatc cgcgtcataa acaatgtgac gttataacca tgctcttgcg
     9541 ctatcatcgt aaaacttttc aaaaatacat tcagagaatc tgtaaagcta ggaataacca
     9601 tgccaattag cttcgttgcc ccttttttca gagacacggc gtttatattc ggaacataat
     9661 ctaactgatc aattattgtc tgaacacgtt ttctggtttc atcgcttaca tagtcgcgct
     9721 tattaatcac tcgggaaacc gttgctgatg aaacacccgc tagtttcgcg atttcttgta
     9781 tatttgccaa ttaaaaaaca cctcgatttc tcgtagctct ctaattagta taccaaaaaa
     9841 tcccgccaaa tagccagttt ggataaattt aaaataagtg cttgacctgt aatgcattac
     9901 atgaattatg atgaatgaga agaaaagaaa acgctttaaa attctaggag gtaagtatat
     9961 tatgaaaaaa ggtgtaaaaa tcgttacaat tggtgggggt tccagttaca caccagaact
    10021 tgttgaagga tttattaaac gctatcatga acttccaatc agagaacttt ggctagtaga
    10081 tattgaagct ggtcgtgaaa aattagaaat cgttggtaat atggcaaaac gtatggtcaa
    10141 agcagcaaac attgactgcg aagtacattt aacacttgac cgtcgtgaag ctctaaaaga
    10201 tgcagatttt gttacaacac aatttcgtgt tggtttatta gacgctcgta ttaaagatga
    10261 aagaattcct cttagccacg gcatcatcgg tcaagaaaca aacggagcgg gcggaatgtt
    10321 taaagctttc cgtacgattc ctgtcattct tggtatcgtt gaagatatgc gcgaactttg
    10381 cccagatgct tggttaatca acttcacaaa cccagcaggt atggtaacag aagccgttct
    10441 tcgttacggc aactgggata aagttatcgg tctttgtaac gtgccaatcg gagcagtgaa
    10501 aagcgcatcc gacgttttag aaaaaccaga agaagactta ttcttcaaat ttgctggaat
    10561 caaccacttg cactggcacc gcgtattcga caaagatggt accgaattaa cagaaaaagt
    10621 tatcgacggc ctttatgcac cagatgctaa cccaggaaaa gtcgttgaaa acattaaaaa
    10681 catgcgcttc ttatatgagc aagttaaaca tctaaaaatg cttccttgtc catatcatcg
    10741 ttactactac atgacggatg caatgcttga agaagaactg gcatctttca aaaacgaagg
    10801 tactcgcgga gaagtcgtga aaaaactaga agacagctta ttcgaattat ataaagaccc
    10861 aaatcttgat tacaaaccag aagaattatc caaacgaggc ggcgcacatt acagtgatgc
    10921 agcatgtgaa atcatcaatt ccatttacaa caacaaaggt accgtaatgg tagtatctac
    10981 tcgtaataac ggcgcaattg atgacgttcc ttacgatagt gctgtagaaa tcacaagtgt
    11041 tatccgtgcg catggcgcag aaccaatcaa cttcggtaaa ttcccaccag cacaacgcgg
    11101 cttactacaa gtaatgaaat ccatggaaga attgactatc gaagcagcag taacaggcga
    11161 ttacgcaact gcactacaag cattcacttc taacccactc gttccaagcg gcgacttagc
    11221 aaaaacaatt ctagatgaaa tgctagaagc acacaaagag tttttaccac aattcgctaa
    11281 ataattcgca agtgatccct agaaaatagg gatcactttt tttgtgagtt gttttagcga
    11341 gcattttttc aagtttcctg taaaatagaa aaaaggaggt gtgcttgatg caaacaaatc
    11401 ttgaaagaat aaaaaaacac atagaaaaat tagatactta tacagcaact ccgggtcagg
    11461 gaacaactcg gcttacatat agcaaagaag acctcgacgc gcgcaactat ttaaaacaag
    11521 aaatggctaa agtaggcctt gctgtttcag aagatgcgat tggaaatatc tacggacgac
    11581 tagaaggcga aaatccaaag ttaccagcag taattgtcgg ctctcatttt gactctgtac
    11641 caaatggtgg tgcttttgat ggaccagctg gcgtcattac tggacttgaa gtagccactg
    11701 ttttctatga acaacaaatt aaaccacatt ttccgcttga aattattgcg atggtggaag
    11761 aagaaggcgc tcgttttggc gctggcctcc ttgcttcacg tacaattact ggcaaagtta
    11821 ccaaagaaat gctccatgaa atgaaagata tagatggaat tacagccgca gaagccatgg
    11881 caaaagtagg atttgatgca aatcaagtag ttacagctat ccgcacgaaa gaatccgtta
    11941 aagcatttat cgaactacac attgagcaag gaccagtcct agaaaatgcc aatgaagatg
    12001 tggcgctagt agatacagta gtcggtttaa cagaaataaa agtaacagta aaaggacaag
    12061 ccggccatgc aggcacaacc ccaatgcttg accgaaaaga tgcgctgatc acagctgtcg
    12121 aaattttagg tcaactacca gaactagcta tccaagaagg cggcggaact gtattaacag
    12181 tgggcaaact caacgtctat ccaaatggcg caaacgttat tccagataaa gtcgttttta
    12241 ccgtagatat ccgagcaaaa gacgaaattc acgtccaaaa tacattagca aaaacaaaag
    12301 aaattatcca atccgcagag aaaaacggca tcacttgcga aatagaagat atgctatacg
    12361 aaccgccgac ccatttatca aaagagattc atcaagcatt gactgaaagt gccgaccaac
    12421 tcggcttaaa ataccgaaca atggttagcg gggccgggca cgacgcgatg attttcgcta
    12481 gtttaaccga agtgggcttg atttttgttc ctagccacaa cggcataagt catgccccag
    12541 aagaatggac cgattacgac aagctacaaa aaggaatcga agtcgtactc aagacagtaa
    12601 aaaaatggac ggaggaaagc gcgaatgaat cagaaaataa aacaagcagt tttaaataat
    12661 gaagaagcaa tgattgcctt ccgccgtgat ttgcacatgc atcccgaact ccaatggcag
    12721 gaatttagaa ctaccgacaa agttgccaaa gaattggaca aactgggcat tccttaccgc
    12781 cgcacggaac caaccggatt aatcgcggaa ctcaaaggcg ggaaatcagg gaaaacagtt
    12841 gccttgcgtg ccgatatgga cgcactccca gtccaagaac taaaccaaga cctcccatat
    12901 aaatccacag aagacggcaa aatgcatgcc tgtggtcatg atgctcatac agcgatgcta
    12961 ataaccgcgg caaaagcact cgtagaaata aaagacgaac tacccggaac agtgcgcttc
    13021 atttttcaac cttcagaaga aattgcagag ggtgcgaaag ctatgatagc ccaaggagcg
    13081 atggaaggcg tggaccacgt gtttgggatt catatctggt cccaaactcc aagtggaaag
    13141 atatcgtgcg tagtcggctc cacattcgcc tccgcagata ttatccaaat cgacttcaaa
    13201 ggacaaggtg gtcacggagc aatgccgcat gacacaatcg acgctgctgt aattgcttcc
    13261 tcattcgtta tgaacctcca atccatcgta tcacgcgaaa cagatccact tgatccagtc
    13321 gtagtaacta tcggcaaaat ggatgtcggc actcgctaca atgttatcgc agagaatgcc
    13381 cgtttggaag gaacgcttcg ttgcttcaac aacataacac gcgccaaagt cgcaaaatca
    13441 attgaacact acgccaaaca aaccgccgct atctacggtg gcaaggcaga aatgatatac
    13501 aaacaaggca cacaaccagt aatcaacgac gaaaaaagcg cactactcgt ccaagaaaca
    13561 atcacagaat cattcggcga agagatgctt tactttgaac gtccaaccac gggcggcgaa
    13621 gacttcagct attttcaaga tgaagctccc ggaagtttcg cactcgttgg ctgcggcaat
    13681 ccagaaaaag acaccgaatg ggcgcatcac catggccgat ttaatattga cgaaagtgtc
    13741 atgaaaaatg gcgccgagct atatgcccag tttgcgtata attatttaaa tcaaaattaa
    13801 taaaaaaagc ctccagctaa ttcaattaac tggaggcttt tcgcatgcta ttgtttttct
    13861 actacatgta cgtcttcaaa agaaccgtat tttgtccacc aaggaacggc accttcatca
    13921 agcaatttat caagagaagt aatgttttct ttcccttgcg tacgaagcca ttcgcgtaaa
    13981 gcgtcatcgc cttgtttgcc gtacacttca ataccatcag cccaagttgc acgaccacaa
    14041 agaacgccgc tatactgcac gttatgttgg ttcgcaaatt ggattgtttt gtggaacatt
    14101 tcagaagtta caccagcact aagataaata aatggaagtg ggcttaagtc agagcattct
    14161 tcaaaatgac gagctgcttc gtcttgcgta taagcgactt caccttccgc aaaaccttcc
    14221 acatatttaa agttaactgg aacttcaagt ttaagtacat ctacaccgta acgaggttta
    14281 gagaattctt taattgaagc ttttactttt gctggtttca atttagcata ttctaaagaa
    14341 ccagaatcag taactgttgc atcataagta attggctcta agaaaaatgg aatatcaact
    14401 gcgcgacatt cagcaccgat tctttctaaa aaggcatatt tgatttcatt aatttcagct
    14461 ggctcatctg gatcataata aacgagaatt ttaacagcat ctccgccatt ttctttaata
    14521 cgaagtgccg ataaatcttc aattaaatca ggaagtttac caggagttgt tgcgtcatat
    14581 cctgtttttt cataagaagt taaaagtccg ctaccttcgt ggcgagcttt gattgctgga
    14641 gtaccatatt ctaaatcaag caaaatcgca gaagcataag gtgtaagttc ttcagaaaca
    14701 agttgtttga agtcttccac atcttttttg ttttctgttc cttttgcttg ttggatcatt
    14761 tttttgagtg agccacgttg gtcaatggca agcgctgcaa tgacaccttt ttcgttggag
    14821 agtctttgta aaccatcaaa tttacctttt gttatttgta ccatttttat ctagtctcct
    14881 ttatagcaat ttgtcgttgc ttaatcaatt tatccttcct tattatacca ctgaaaagtt
    14941 tttttaaaac ataggtatat ttccgtattg atttatctga agtaataaat tacgatatat
    15001 gtggagtgtt aggtattgat agaaatttgg gatattttct attaatacat tctcttttgg
    15061 gaaagtcatt taacgattag actagaccag gagtgatgaa atgaatcgac gcgaaagacg
    15121 taaacacaaa agacgcaaga acatgattat cgtgttgagt actgtatttc tactgtttat
    15181 tgccacaagt tggatgatat acgaattcaa aagtaaacaa gagcaaacag tatccgcacc
    15241 tactaagaag aaagcagcaa ccgcaacaaa cccaccggaa aatgcagcaa ctaatgagcc
    15301 tgaagaaacg aaagagcctg aaccagtaga agaaaagcca aaggaaacaa ttgtaaaaaa
    15361 tcaagaaatt gataactatt tacaaaaaat tggttttagt ggttcggcac tggttgttcg
    15421 cgatggagaa actatcatac aaaaagggta tatgtatgca aatcgtgatg aaaaagtatt
    15481 gaatacacca gatactttgt tttatattgg ctcttctcaa aaagcaatca tagcaacggc
    15541 acttttacaa ttagaagaaa aaggtaaaat aaatacgaat gatccaattt cgaagtatat
    15601 acctgacttt cctaatggta ataagatttt agtgaagaac tttatgaatc atacatctgg
    15661 tatagttgga cgaccaaaat taacgagtaa tatgacaccg gatcaaatta ttaaagctat
    15721 tgaaaagcga ggaattaaat cacaacctgg gaaatgggat tatttggatg ctaattatgc
    15781 tgtagtaggt tatcttgtag aaaaagttag tgggcaacct ttagctacct atcttcaaga
    15841 aaatatattt acccctgcag gaatgaagca tacaggatac tatcaaaaag atgttgatgg
    15901 gggaaaaaac gtatcaacag gctataaaat tgatgaaaat ggagtctttc aaagtccaaa
    15961 gcttgcagac ttaacgaaat tatatggtgc aggggacatt agtatgtcta caacggatat
    16021 gtatttgttt gacaaagcat tgatggataa aaaattgatt tctgaagcaa gtttgaaaaa
    16081 aatgttcaca tcaggaagca aatcaactta tggaatggga ttctatgtgg atccaggtag
    16141 ttataatagt cacggagttg tgaccggttg ggacgtatct aatagtgtca gtcatacagg
    16201 aagaacttat gttatattat tctccaacgt ccaaaaccac attgcttcat tcggaaaagt
    16261 gaataatgat atttatggtt tcttaaataa ataataaaaa aaaccgattc tatttgtaga
    16321 atcgggtttt tttattattt accagtaatt tgttttacag catcttccat ttgataaagt
    16381 tgagcagagg cactgtagtc actccattta gtattatcca ctttatacac ttggtttttc
    16441 ttcacagctg gaatatcttt ccaaacacct tttagcattt catccacaga atcggtattg
    16501 ccatcagctg gcattaagat aaagagacga tctgctcctg ctgcatattc aggaattgct
    16561 tcactagaaa tagcttttgt ttctttgttt gctttagcag catctgtcgg tgtgaaacct
    16621 gcgccggagt ataagccgtc aaagactttt gcatcgtgca catagatttc tttgccataa
    16681 aattgaatta ctgccgcttt ttcgttcgca acaccagcat ctttgagtgt tgcttttgct
    16741 tctttagagc ttgccgcgta atctttgtcc catttttctt tttctgcttt tttatttaag
    16801 agattggcaa tgttcgaaag ttgtttgtcc ggagtatcac caaaatgcgt gatataaaca
    16861 ggagccactt tttccaagtt ctctaaaaga tccttttggt aatcactaat aataattaag
    16921 tctggtttta aattagcgat tttttcaata ctaggtttgt cattaccaac actttcggtc
    16981 ccttttgttg cctcagggta tgtagtgatg taataatcag ttgtaccaac aggtttaacg
    17041 ccaagaattt ccatttcact tacattttga agtgcgacaa ttcttttcgg tgttgttgga
    17101 acttctactt tacggtccat tgtatcagtg accgtttttg ttgcggattc cttttctttg
    17161 cttgagtctt tatccgaaga actgccacaa gcggttaata ctactgctaa aagcacagtc
    17221 atcaaaatag cagcccattt atgcttttgg tacattgtgt atttcctccc taattgaaaa
    17281 tgattttcat tatcgttaca aaagtaatta tatcgaaaac agggaggatt gacaaggtga
    17341 aatgtagcac aaaaaatttt tatgtttaaa attgaatact atcgccaacc gtaattgttg
    17401 gaaaaatttc tggagaaaca acaatagctc ccggtaaaac ttcattttgt cctgagcgga
    17461 aatagacgga aatatggcca agttcttcga gatttttgtt tgcgtctgag ccgacttctt
    17521 ctattgtata cgcttgttca ccaatgagta acgtgttccc ttttgtaagg gcgttattcg
    17581 gtacatcttg gaattcgtgt ataacagata tttcgcgtaa ttcattggta gcagttggtc
    17641 caaataagat aacgattttt tcttcttcaa aagcggggac aagtggcccg atttccataa
    17701 ttttacttat agtcatagca aattcctcct aaaattaata cataccgata ctgaataccc
    17761 atgcgataac aacagcaagg acaccagtaa tcatccggct ataaagaata gctggaacgc
    17821 cgaactgaac cgtttttggc ttagcttctg caagagagag tcctacgggg ataaagtcgc
    17881 aaccagcttg agcattaatt gcaaatagtg ctggtaaggc gtaagtaact ggaatagcac
    17941 caatcgcaat ttgagaacca atcagaacgc cgattacttg agcgataact gctccaggac
    18001 cgagaatagg tgaaagaaat ggcaaactac aaataaaagc aattaataac attccccaga
    18061 gtgatccagc taaaggagag agcgtattcg caattaattt cccaatccca gtgtaattaa
    18121 taataccgat aatcatacta ataaaagcca taaacggaat aatattttta ataagcatat
    18181 ccacagaatc acgccctgct tgatagaaca cacccattgc tttaccaatg ccacgagaaa
    18241 atttcacaag gaaaccttct tttaattggc ttgcttcttc ttgatcttct ttaatcttgg
    18301 cataatcttc tttgaatttc tctctgtcaa atggtttccc aggttcagtg cttctgtctc
    18361 gaacttcaat atcttcaggt ttgacgccag aaacaaaaat atcttctgta atatgttttg
    18421 cgagcggacc tgatggagaa gaagggagca catcgactgt tggaatacgt ttcatcggat
    18481 aaacaccaat tctcgcagtg ccaccacaat caataacaac acacatcatt tcttcttctg
    18541 gaattgaatt tttaaaacca tccacggctt cagctccaga taattcggca attttcagtg
    18601 ctacaggatg aataccacca ccagtaatag aaacaacttt tgttctcggt tcgctcggag
    18661 taatatctag tccgactccc caaccgcctt gacctttatt cacatgaatt gattgataca
    18721 tttcatttgc ctccttctat ttcagacttt ttcttttcgc attaagaatt tcgtaattga
    18781 ttctgtaatc acaccacgca ttaatataac cacgattcca gctaggaagt aacgaactgc
    18841 aaggcttgac atactatatc cagcttcgac cacaccatta gcaatgccta gataaacgaa
    18901 taattcacca gcattcgcat atggaaataa tcctgtaact gggtgcaaaa acgatacaac
    18961 ggagtcataa aaagctggtt tctgatgctc tttaacaaaa cgaccaaatg tataagccat
    19021 tggatttgtt agcatcagta cggataaaac gggcattaag gtatagcgca aaatcatgtt
    19081 cttggctgaa aattggattg ctcggttgac tcgctcctcc ccgataaagg cgataatcga
    19141 gtaagtaaag gttaaaagga caattaaaag agggacaatt cctgtcataa aactcacaaa
    19201 ctgtttgccg ccagcctcaa ataggccgat aaagtttgtt ccaaaccatt caatataatt
    19261 cactaggaaa cactcctttt tagttattta aagcgctttc atgcaactgt tgactgtttt
    19321 aataattgct ttttcttgga ttgtattctt atttttacta ctaagatccg tcaatatttc
    19381 ggataaatct ttatgatgat agttggtgaa agtcttgaac tttgcaaaaa cagtctttcc
    19441 ggttaaaatt tggcattcat gtacaactcg gttttcattc actaccagaa tggctacagc
    19501 acttgtgcga aatttgagtc gttccatttc ggaataaaga taataaccag ttttcccagc
    19561 atatttatcc gcaactttgt tcatatgatg ctgataatac ctcacttgga aaaaagcaag
    19621 acctgtctga gcgatgaaaa tgagggaagc aataaggaca atattcattt acttttcctc
    19681 cttagagggt gggaagacaa atcacttccc accaagttga aattatttat taaatgtttc
    19741 atcttgcagt tttctaagtt tccaaacagt agtggattca tctaatgaaa cgtcttcgtc
    19801 agtaataaat gtgccagctt tgatatttct gcgggctact acctcaccgc taatcaagcc
    19861 gataggaata tgaccattcg ttgccatatc gacgtgagtt tccagtacac cgcgtacaca
    19921 gaaaccgcca atgccatcta atttttcacc ggcagctatg tcttttttag caaccgcaac
    19981 cgtttcagaa actggtgcgc ccattggaac aatagcgtga tcgtggttca acacagcttt
    20041 tgcaatggtt agaggtgttt caaggctagc tagatgataa ggacgataaa gaatgtgatg
    20101 atcccggtcg ccttttttca tgaggtagct aagttcgtga ctaacgcctt cgttttgccc
    20161 tttgacgata acgaatacgc caggagccaa accgtctaca tattctacaa cgccaaattt
    20221 gtttaaaata ccaccttggt cttttaagtc tagatctttg atgaccgaat caacgtcacc
    20281 tgaaatacca tgcattccaa caacgtctgg gacataaccg atagcattag aaagtaaatt
    20341 catttctgcc attgtttttg ttccatcttg gaaagcagct agcatgtgag acgccatatt
    20401 tttcccatcg gcttccgctt gacagctatc agggttagcg ctgattttaa gtttattatt
    20461 tttcccttta ccagcgacaa ggacttccat acccatagat ttggaaaatt cgtaaagttc
    20521 agttatcgca gccggttcgt cgccatcaga gccagtatat acgagaccag cgctgtcata
    20581 tagttttttc attagtggtc cgatagtaat atcaatttct acattaagta aaacgagttg
    20641 ttttttagca agtaaagttt ctagggaaat ttttgcgccg acttctggaa caccagtagc
    20701 atcaacaatc acttctacaa gatcagaatg aataatttct ttaaagtcat tagataatag
    20761 aattttttct tttttggttg ctgtggcatt gtaagcatct gcggcttttt gtgctgcttc
    20821 tacatgaata tcgctaatac caacgatact catacctgga atagcggcga tttgcgaaat
    20881 cataccgaat cccatttgac cagcgccgat aacaccaacg cgaatcggat tattttcgtt
    20941 ctcacgagca agtaactgtc tatataaagt catttcaagt tcctcctagt aatcgttttc
    21001 atttattaaa ataaaactcc ggataaagct attttatcct aacaaatgaa ttttgtaaca
    21061 tttgtcacct atagtgacaa atgtcatatt tcacaaatta aatataacac tttaacattt
    21121 tttcgtcaat gaaatattag ctttttttat tttttgagaa ataaaaaaag ctcattcctt
    21181 tgcgggagag agcttttgga tattttaaat tttatagtta ggattatttt ttagtcgttt
    21241 ttttgaagaa tgtattcggc cattctatca gtaatcacaa tcacatctat caatccggca
    21301 ttaagagctg ccactaatgc ttcttttttt tgtaatccgt ttgcaagtgc gacgacggtg
    21361 gggatgttct tcaactcctc tagactaaga ccgattacat gggtgttaat ctcagttttt
    21421 gcttcttttc cgtctgctgt gaaaaagcgt gaattaatat caccgacaac atctttatag
    21481 cgtagttctt caatatcttc agaattaata tagccgattt cttccattgt gctgtgatta
    21541 taagggctcg atacaccgac aatagccata tcaaccgttt ttccttcttc taatacttcg
    21601 ctaatatatt tgtttttgga taaatcggtt ttcatttccg tatcttcaac gagcgcaggc
    21661 gcatacaaat atttggagtg gcatttcatt tttttcttta aatcataaca aatttgattg
    21721 gaatgcagat caatatcact cgagcccatt ccacctataa gcggaataat tgttaagtct
    21781 ttatgcggga tgaatgggaa ttcattagca aatttgcgaa ttgttttccc ccatgaaatc
    21841 ccgagagttt ttactttagc aatcctttta ctcagtgtat aggcagcttc tttggcaagg
    21901 aaattcagtg cttcttcctc agacatatcg tgcgttgcaa cgacaatcgc ttcctctaaa
    21961 ccaaactttt cttctaattt ttgttctaaa tctaccgtat agtaagtttc gtctttaata
    22021 aagatttcca caatgcctaa gtcttttgcg cgttgcaaag ttttagagat aatggatctt
    22081 gaaatcccga tttttttggc gatttgcgct tgggtccagc cgtagtgata gtaccacgta
    22141 gcgattttca ccatatctct tttttcttcc catttcattc tacttacctc catttacatc
    22201 ataatggaac aaaagttata cgatgtcaca aatgttttta tgctaatagt atcatagaat
    22261 ttgctttatg aaaagttggg gtagatagga acatcgtttt tgccgaaaaa ggagtaattt
    22321 tgaaatagac agtgtgcata ctatttattt gtgacaaaaa aacaaacaac tttttttctt
    22381 atttacgagg aattcaccaa atttttttag aattattcta gaagaaatat cattattcca
    22441 tctctatgga gaaaatctgc caagccgcac atggtaacat aagttgagtt ctcgcccaac
    22501 ttatatatcg cttactaaat tattttagaa aaggagtggg ctatagtgga aaagttattt
    22561 acatataaag agtttgttga catgatgcaa aaatatggga ttagacacac gaaacgcaag
    22621 ctaagacgtg gcgaaaattt aatggagaac gcttctaaat ttagtaatgt tgttttacta
    22681 atagatggtt atataagcag ttatacatat gaatctccag aaaaactctt atctatattt
    22741 gaaccaggta tttttctacg ttattccatt ttagaagatc agccagagtt tgtgacaaat
    22801 attgctctct cagataactg tgaagtatac gaatataaaa aagaagatat tgaatatgca
    22861 ttaacattat ttcccgaaaa ttttggtttt cagtatttct ttctaaagag aatcgggcgg
    22921 cat
//
LOCUS       DASDYK010000035        22754 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.035, whole genome shotgun sequence.
ACCESSION   DASDYK010000035 DASDYK010000000
VERSION     DASDYK010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 22754)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22754)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22754
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.035"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            358..852
                     /locus_tag="U0308_001353"
     CDS             358..852
                     /locus_tag="U0308_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HEM2316320.1"
                     /translation="MKKIISLLVAFVCLWSILLPGHEADAAAKINSWDLVDSSKHLDY
                     SGNSKYMSFIRSGANTWNAYKKGVIRPASGANKSDVYCSDISANNNINATTYSNGKIT
                     FNKKNMDKKNNAGKQNVATHELGHGLRLGHNASSDVMYQYSTSKTTLSTNDKQSYDAA
                     YKKY"
     gene            868..1488
                     /locus_tag="U0308_001354"
     CDS             868..1488
                     /locus_tag="U0308_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HEM2316321.1"
                     /translation="MKKTTMGIIASAISILTIGCFLTINTYAEKAEPKKKEVPTYAIF
                     SDYTLDVDNPDEVVEDADYVFVGKVTEETGTIYKNKTPIEQEDGSIEYIGEAYTNYKV
                     EVISNLKNELTLNKEIALEKQGGIREDGSAYDVFEDDQLPEEGEIYIFTAYTQDDGSL
                     LVAGGNSTISFDEKTKNIDTEKEVSKTEEFELYEEAVENQVTSNEN"
     gene            1892..3661
                     /locus_tag="U0308_001355"
     CDS             1892..3661
                     /locus_tag="U0308_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2316322.1"
                     /translation="MKIYKALGWFFKENWKSYAFGVTILFTIALLQLVPPQIIGYTVD
                     AVTNDSLTKDKLIKWMIILVVAAILAYGGRYVWRMLIFGSDNKLQRTLRLRLFEHFTK
                     MSPFFFQRYRTGDLMAHATNDITAIQQVAGIGVLTLSDSVLTGGTVIATMAITIDWRL
                     TLIALLPMPFMVLGSSILGKKLHDRFHGAQAAFSMLNDKTQESISGIKVTRTFGQEKE
                     DIQDFAKQTKEVVQKNISVAKVDAMFDPMISIIVGISFVLSLGFGAKFVVDGELTIGQ
                     VIAFSNYLFLLIWPMLAFGFLYNIIQRGNASYDRVQHLLAEKEDVLDQEGALDTVPVG
                     DLQVAMDKFTYPDESEPVLSDIHFELKAGETLGIVGRTGSGKTSLLKLLMREYDTYEG
                     KIAFANVKIQDYTVRALREAIGYVPQDQFLFSTTVRDNIRFGKPDAPQEEVTKIAKLV
                     AVDEDILGFENGYDTIVGERGVSLSGGQKQRLAIARALIMNPELLILDDALSAVDAKT
                     EEQILANLKENRSDKTTIISAHRLSSVEHANLIIVIDKGQIVERGTHKELMALDGWYA
                     EMFHEQQLEEALEEGGAADGSDE"
     gene            3645..5450
                     /locus_tag="U0308_001356"
     CDS             3645..5450
                     /locus_tag="U0308_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316323.1"
                     /translation="MEAMNEQDEMLVMSGKEHREVLKRMLSYTKYHIPSLIWTGVLVL
                     LVTLADVFAPILIKIFLDDYLTPMNLEMQALLILGAGYLGLTIGKSVVWYFQLLFFQK
                     IALEIVQQMRIDIFTKLHSLGMRYFDKTPAGSIVSRVTNDTEAVKDMFINVLSTAIQS
                     LFMLVGIYAAMFALNVQLALYSLLLFPLIVFIIFVYRKYSSQFYRARREKLSQLNAKI
                     AESISGMSIVQQFNQERRLVKEFEKINKDYYDVGMKNIKFNALLLGPAIDLIYALAVV
                     IILSFFGAESLIGPVAIGTIYAFISYFDRFLEAIYNVMERLAMYQEAITAASRVFRIM
                     DETEEVPAQLNDPEAKITRAKIEFKDVSFAYEGGRDVLKNISFTAEPGQTVALVGHTG
                     SGKSSIINLMMRFYEFERGDILIDGKSIKSHEITELRKKTGLVLQDSFMFYGDINTNI
                     RLYDKSITDEQIVDAAKFVQADGFIQTLSDEYNHKVIERGASFSSGQRQLISFARTVV
                     TNPQILVLDEATANIDTETESLIQTGLKRMREGRTTIAIAHRLSTIKDADLILVLSKG
                     RIIERGTHDTLIAEEGVYHSMYQLQNSGMDLDEAL"
     gene            5531..6019
                     /locus_tag="U0308_001357"
     CDS             5531..6019
                     /locus_tag="U0308_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcdC family protein"
                     /protein_id="HEM2316324.1"
                     /translation="MSLIISIIITLVFGAGIIMIRMKASKRPASVKGIIIPPIMMSTG
                     ALMFVIPFFRVSWVDILEAIAMGLVFSVILIWTTKFEIRHKYVFIKRTKAFPVILMGL
                     LLIRIFIKYWISGSLEVGELSGMFWIMAFAMIVPWRIVMYFQYKNTEKELNKVEVSGE
                     YE"
     gene            6193..6708
                     /locus_tag="U0308_001358"
     CDS             6193..6708
                     /locus_tag="U0308_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316325.1"
                     /translation="MKKWLLVVLTLALGLSLAACSGSNSSDKKEDTKKETTSDKDKVL
                     NYYMDLVDVVNENNGDYNAYVGAVGADPKPSEADLAALAKPASESALKVSEALASEKT
                     PDLGKSTDDFKAAVKQLSDAYKLEADALKASGRDTTKADEAMAKADEAIAGVLKDAGL
                     NPSSITTDTAS"
     gene            complement(6750..7358)
                     /locus_tag="U0308_001359"
     CDS             complement(6750..7358)
                     /locus_tag="U0308_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEM2316326.1"
                     /translation="MFYHFAKNLVHFILIIIGGRFQVQNKDKIIEAPYVVVSTHTSWI
                     EILYLGFALSPTPVHYMAKQELFKGKFLNWLMTHLNAFPVNRDNPGPSAIKAPIRMLK
                     SGKVVGIFPSGTRKTTNLHLKRGAVTIAHKAKVPMLPAVYDGPKTFGEILKRKKIIIR
                     FGDPVLFNDTELDQKELLEVKSQELMATFEQLQNEINQTKNK"
     gene            7474..8598
                     /locus_tag="U0308_001360"
     CDS             7474..8598
                     /locus_tag="U0308_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HEM2316327.1"
                     /translation="MKFLHTADLHLGKIVSGVSMLAEQEYILAQITKIAEEEQVDALI
                     LAGDLYDRAVPPADAVKVLNDILVKWNVELGIPIFAISGNHDSAERLAFGSQWYESSK
                     LYMKGKCTSQFEAISFMDAEVWLVPYHEPAIIREAFADNSIRSFEDAMQAVTKQIRSK
                     WDTSKAQILVGHAFVSGGIPSDSERQLAIGNVDRVSTDCFDGFTYTALGHLHHPHAIR
                     HPSIFYSGSPLKYSFSEANDHKSVRIVELEGKELVSVTERFLTPKHDMRIISGTLAEL
                     TENLVENPDDFFQVNLMDEGALIDPMGKLRQFYPNILHLERKKQTLKETQDNFEEIMK
                     KDDLELFGQFFEHVNGTELTETQKQKLADVFEQARKEDAE"
     gene            8595..11666
                     /locus_tag="U0308_001361"
     CDS             8595..11666
                     /locus_tag="U0308_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HEM2316328.1"
                     /translation="MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTI
                     FDAISFAIFGKANTFDRESFSMRSHFATDKEITEVTLAFRLKDKIYQISRIPQQEIAK
                     QRGNGTTTSPQKAELYELIGDEMKLLASSVRDVNAKMEELIQLNVDQFRQILMIPQGE
                     FRELLVSDSKEKEVILQRLAHTAYYEKVENLLWEKQKQAEILVVEARKKVAELAELSL
                     PDGEVSGKTTSEISVLQNEAIQKEQAILTELENKLSIIRKQTSEAVEKVTLAKEQLLD
                     WQNLDKYTEEVATLEAEKDFYQTIEVRMEAAKRASNLQSQDALCIRLKEQLETAEQTE
                     KQVALEAEQVKAQFSHAKKQKEALAEKEAELEINKRTLFQLEEMEPKILELETVLIQK
                     RRAELDWKKTTTLLEKIIDKEQKIATELQSVEARLAEINKAELMYLEVINKRTTLEAR
                     IEKEQELVNKRIKMEEWAAAKQTEEQTLAQLLIEKAEMERTIKQEETKLEKEQTATIA
                     AHLHEGDACPVCGSQSHPILAKFGETADLETLEIAKAKLQEKQLVITTTEKAISQLEW
                     QLNEWADMKEQSLAEIQQTLAENIQLATNLREQITQLQSEVAQKETVQATLESLKNRQ
                     NETLTEKNKMALEVEKLHQQVQLTEGKRTYLEQSIPDELRDKAVFDNKMKELSSKIET
                     HIKQAEQIDALFRQAEKETTRLESTLHSAQKTTVDAKEALQVQREIFKEAMKQNDFLS
                     YDAYKQALLSVEELKNLEEKLAEYERKRHLAVSRQADLKEKLQNKQKPNMEQLEFIMK
                     EKQLELSQSEENTMKQREFVAKRKELVENYQNSIQAVEQAEENYADIGLLADAARGKN
                     ARRLTFERYILAMFLDTIIHRANHRLSKMTSGRFELQRKMEKAKGNVQSGLELEVFDE
                     YTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFIDEGFGTLDPESLE
                     AAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFITASS"
     gene            11750..14968
                     /locus_tag="U0308_001362"
     CDS             11750..14968
                     /locus_tag="U0308_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM2316329.1"
                     /translation="MEHFTAIQNKMIPYSVKQAGKKLMEDGEIIQFREKDASDHFSTY
                     FIDQNVVEDAGNENYACSCADFQLNAICKHIYATHLKMEKEKQKAAKQDFKNRILTQE
                     SNTLLSLFQQNMAQQLEVEEDNTNKTPLQTQYIIRLKPDDSSYIMTIEVKVGTERTYV
                     VKNMNTFLAAIRDRQWLVFTKNFAYDPNEHFFLEEDKQILDKLLQISEIAKMYDTDSF
                     YWSKSYAEEKNLTIPPSMASDLLELLTERDTTCIIMKERVEDIKYRGINVRHDNLDFI
                     FELKKSAEDKYQLEMEDLQQAIFFEAYQLLFFDGTFFIPAKEVWESLKPLMEFHKVTK
                     NEVVQFSESQLSEVISYVLPALQKSGKLKLDDSIEDRITQQPLDCKLFIALEYGEHTL
                     RLEYHYGNQLFDPFATSEEENEKIMIRDVEKEARVMNIIESAPVHFSGTKMVVNKQEK
                     DLYQFYYRTIPKLAEYAEIYMEDGLEEMVEENVRPVTTLDVSGDNDYLSVSFDFKGIP
                     EEEVQNVLESLREKRSYHRLKSGRFLSLESENYKQMEDVLQMLEVRKKDVQANMQVPL
                     YRGMQIYDILGAGTQDEHHKFSRSFRELLTDITTQSEDSFALPKGLKAELRDYQLTGF
                     EWMKSLAKYNLGGILADDMGLGKTVQTISFLASELEDNPNLKPVLIITPASLLYNWQS
                     ELEKFAPTIPVTVLHGTKQSRIAEMEEMKHGHVYLISYPSLRQDIVHFADVAFSSVII
                     DESQAIKNYHTKASQAVRALKRNHVFALSGTPLENSIDELWAIFQTLMPGFFPSLRKF
                     KEIPYDNIAKMIRPFLLRRLKQDVVKELPDKIETNLYSELTDEQKTIYLAYLEKIQAD
                     LEASNGNASEERIKLLAGLTRLRQICCDPSLFVENYQGESGKLLQLFDTIQTARENGK
                     RILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIFLISLK
                     AGGTGLNLVGADTVILYDLWWNPAVEEQATGRAHRIGQKRVVQVFRMITKGTIEERIF
                     DLQKKKQALVDELIQPGEQMLGKLSTEEIKQILQLDNGRDDK"
     gene            14968..15390
                     /locus_tag="U0308_001363"
     CDS             14968..15390
                     /locus_tag="U0308_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HEM2316330.1"
                     /translation="MKKWEVFAVQNVEAAEEIINKLVSEGYEKEDISVLAKSKHNKNL
                     ETLAEKENIEIERPVNEEAFGIISGILQSLSGAIVIPQAYNPKYGALYAAGPFAKWFS
                     KTDDKSVKRLLEDFDLTEKQVDKMIENLHADNILIFAR"
     gene            15414..16217
                     /locus_tag="U0308_001364"
     CDS             15414..16217
                     /locus_tag="U0308_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEM2316331.1"
                     /translation="MQIKEFLISRRSELVNMFYENYYIETDEFKLRLRGGEEEEAIRS
                     LSTASCGMIIDVITGVKERDFESIGKRRFNDKTDIRKIHQHMSEVEKYIITSLVKWKE
                     AENVFYTDADIIQFMLDIKDTLSSIQQQLLEGFMQENRNQVAAQRKEIIQLSTRIIPI
                     NDSIGVLPIVGSLDDDRGYFMKEKAVESADKLNLDTIVIDFSSAVLKDDFATKHMEDM
                     IQSFKLIGLVPILSGMRPSFAQRTIQVGSNISKLESFGSLEQALTNLGV"
     gene            16372..19074
                     /gene="acnA"
                     /locus_tag="U0308_001365"
     CDS             16372..19074
                     /gene="acnA"
                     /locus_tag="U0308_001365"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEM2316332.1"
                     /translation="MTNWKEKAKASFQLNDKTYHYYKLKTLEEDKLTNIEKLPYSVRV
                     LLESVLRQADGRVIKDSHVEDLAHWSKDGNEGEVPFKPARVILQDFTGVPAVVDLASL
                     RKAMADLGGDPEKINPEIPVDLVVDHSVQVDSYANPEALKINMELEFKRNMERYQFLN
                     WAQKAFDNYRAVPPATGIVHQVNLEYLANVVIANEVADGEFVAFPDSLVGTDSHTTMI
                     NGIGVLGWGVGGIEAEAGMLGQPSYFPIPEVIGVKLLGALPNGATATDFALKVTQVLR
                     EQKVVGKFVEFYGPGVATLPLADRATVANMAPEYGATCGFFPVDKEALNYLKLTGRDK
                     EQIELVEAYLEANDLFFTPEKVEPNYTQIVEIDLSAIEPNLAGPKRPQDLIPLSKMKE
                     TFRESITAKAGNQGFGLDKSALDKEVTVTFGNGDQSTMKTGSVAIAAITSCTNTSNPY
                     VMLSAGLVAKKAVEKGLEVPKFVKTSLAPGSKVVTGYLEKAGLLPYLEKLGFDLVGYG
                     CTTCIGNSGPLKEEIEEAIQDSDLLVSAVLSGNRNFEGRIHALVKANFLASPPLVVAY
                     ALAGTTNVDMLTEPIGRGNNGEEVFLDDIWPSSEEVKALVEETVTPELFREQYAHVFD
                     ENEAWNAIETTEDALYKWDENSTYIANPPFFDNLAKEAGKVESLSGLRVIGKFGDSVT
                     TDHISPAGAIGKDTPAGKFLQEEGVAIRDFNSYGSRRGHHDVMMRGTFANIRIKNQIA
                     PGTEGGYTTYWPTGEVMSIYDASRKYIENNTGLVILAGDDYGMGSSRDWAAKGTNLLG
                     IKTVIAKSYERIHRSNLVMMGVLPLQFQPGEDAETLGLTGSESLQVEIGEEVAPRDLV
                     KVTAVREDGSSFTFEALARFDSEVEIDYYRHGGILPMVLRGKLK"
     gene            19174..19407
                     /locus_tag="U0308_001366"
     CDS             19174..19407
                     /locus_tag="U0308_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316333.1"
                     /translation="MRYQKISFIVTGIIAAVIGYLIFTSNYHPDVPNWLLFLFLALSI
                     AVAVSQWKEKRLIWSCVGLFVAVLISVYYILTI"
     gene            19420..20001
                     /locus_tag="U0308_001367"
     CDS             19420..20001
                     /locus_tag="U0308_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEM2316334.1"
                     /translation="MSEELRCPWSINDPFELEYHDTEWCVPSKDDTYLFEMLNLEGAQ
                     AGLSWRLILHKRKAYQEAFFHFDIDKCARLTDDELATIVEEAAIVKNRLKVKAVRTNA
                     LATQKVQAEFGSFANYIWGFTNNDRIINEWQGMGEVPASTELSEKISKDLKKRGFKFV
                     GPVIVYSYLQAIGILDDHLRSCPFHTFNREATK"
     gene            19998..20972
                     /locus_tag="U0308_001368"
     CDS             19998..20972
                     /locus_tag="U0308_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEM2316335.1"
                     /translation="MIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVKRLTDMGFKVT
                     FGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYELISE
                     NPKILCGFSDITALATAIYTQTELITYSGAHFSSFSMEKGLDYVMDSFSKCLLQKEPF
                     ALKESAAWSDDEWYLDQENRNFIPNEGLVVMQPGEAEGIIIGGNLCTLNLLQGTEYMP
                     NLAGTILFIEDDFMTVPETFDRDLESLLSQPGAGEIEGLVIGRFQQKTAMTAEKLAYI
                     IETKTALQKIPVISGADFGHTQPIATFPIGGTARIDTNQTDKIQIIRH"
     gene            complement(21009..22076)
                     /locus_tag="U0308_001369"
     CDS             complement(21009..22076)
                     /locus_tag="U0308_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEM2316336.1"
                     /translation="MIALVKNEFTKLFSRKSSWIMQIVLFVAVLALALLMFFVSKIDT
                     SGIEGGDASNAGITAYYDDKGAPVSEEEYWNSADKDGNPTYKSETLSLTDSVAYLKTQ
                     EQAAPTKEAKETIQKQIDFYQAYVDADEKPASNSAGISSADFFASLGSSGAVATMLVV
                     VVASIIVATEFSGGTIKLLLTRPYSRSQILFSKYVMCIVYSIISSITLLVASFIFSFI
                     LPKQSIFMPLSPSTGAMTAFEHAWMLLGTNFLLMIVYATIAFFFSSVVRSQALAVGVG
                     VGVLFSGGIIRQLLPLAIEKYDWMKWIIFNLLSLNDTVGGSKIAGGLADWQIIAGLGV
                     YTAIILFFTFFLFKKRDVALS"
     gene            complement(22073..>22754)
                     /locus_tag="U0308_001370"
     CDS             complement(22073..>22754)
                     /locus_tag="U0308_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316337.1"
                     /translation="GAIIENPEFYMYMSGWANLKQFARMSQKNITDEHVREIVELVKL
                     TGAINQKVKTYSLGMRQRLGVAQALIHSPALLILDEPTNGLDPQGMAEFRTLIRDLAT
                     NGTSVLISSHLLSEIQQITDRFAIINKGVLTHIEKMSDLIENHVAAYKLKVSDPEATK
                     TVLATLPVKLVAQNEDLFKIEVAHEDVHLIARALIQANIDLLEMVPLQASLEERFLEL
                     TKGGGAEV"
BASE COUNT         7688 a         3822 c         4839 g         6405 t
ORIGIN      
        1 atgaataaaa aactaataat cgctctaaaa cgagtggaaa taggcctttt taggcaaagt
       61 tatttcagaa agagtaagaa taattctaaa taagaatgct ttttagacat tcacgacata
      121 aaacagacat ttcattacat ttttggttat acactctgtt ttcgtgttac aatttttttg
      181 ttcgatgaaa ggtaataaaa agcacagtct actacgggaa aatgatgggt gattgtatgt
      241 tttaaagtga ggtgaataca aaaagggagt gagtttgtaa gataatagtt tgttttatga
      301 caatatgttt gaggctacac tttattaatt attacataca aagagggaga gcggagaatg
      361 aaaaaaatta tatcattatt agtagcattt gtatgtttgt ggagtatttt acttccagga
      421 catgaagcag atgcagcggc aaaaatcaat agctgggact tagtagattc tagtaaacac
      481 ctagattact cggggaattc aaagtatatg tcatttattc gatctggcgc taatacttgg
      541 aatgcttata aaaaaggagt tattagacca gcttcaggag cgaataaatc agacgtatat
      601 tgtagtgata tttcagccaa taataatatc aatgcaacga cttatagtaa cgggaaaatt
      661 acttttaaca agaaaaatat ggataaaaaa aataatgctg ggaaacaaaa tgttgctaca
      721 catgagttgg gacacggctt gcgactcggg cataatgctt ctagtgacgt aatgtatcag
      781 tatagcacgt ccaaaactac tttatctaca aatgataaac aatcctatga tgcagcatat
      841 aaaaaatatt aaaaaggggt actaacattg aaaaaaacaa ctatgggaat aatcgcttca
      901 gcaattagta ttttaactat cgggtgtttt ttaacaataa acacatatgc cgaaaaagct
      961 gaaccaaaga agaaagaagt accaacatat gccatttttt ctgattatac actggatgta
     1021 gataatccag atgaagtggt cgaggatgca gattatgtgt ttgtagggaa agtaacagaa
     1081 gaaactggaa caatctataa aaataaaacg ccaatcgaac aagaagatgg ttcaatcgag
     1141 tatattggtg aagcttatac aaattacaaa gtagaagtca tttcgaattt gaagaatgaa
     1201 ctaacgctga ataaggaaat tgcacttgaa aaacagggtg gtattcgtga agatggttct
     1261 gcttatgatg tttttgaaga tgaccagtta ccagaagaag gcgaaatcta tattttcact
     1321 gcttatacgc aagacgatgg atcactcctt gtagcaggtg ggaattctac catttctttc
     1381 gatgaaaaaa cgaaaaacat tgatacagaa aaagaagtga gcaaaacgga agagtttgaa
     1441 ttatatgaag aggccgttga aaatcaagtt acttccaacg aaaattaaat aagccattat
     1501 aaagcatagc gattctggca tgaatcgtta tgctttttta tatagtcgaa ggatttcgag
     1561 aaaaagccta ataaaaataa tttttaaaca atttgcaatt atttgttgcg ctttcaaaaa
     1621 aaatcggtta aactaataac gttgcataat aaaacaaagg aggaatggac gatgaataat
     1681 tatatgaaga cttcaaacaa ggcattattg cgcttaaaaa tagaatttat ttcaccggat
     1741 catttcacga acaagggaac tctcctttaa tttggtttta ttttatacaa agtggtgaca
     1801 aataaatata ttttttcggg taataatggg cagaaatagg tccattattt ttatttgtcc
     1861 aattttaagg agaaaaggga gggattgttg tttgaaaatt tataaagcat tgggttggtt
     1921 ttttaaagaa aattggaaat cttatgcatt tggagtaacc attttgttta cgattgcgct
     1981 tttacagtta gttccgccgc aaattattgg ctatacggtt gatgccgtaa cgaacgactc
     2041 actgacaaaa gacaaattga ttaaatggat gattattcta gttgtagcag cgattcttgc
     2101 atacggtggt cgctatgttt ggcggatgtt aatttttggt tctgataata aattacaacg
     2161 cactttacgt ttacgattat ttgaacattt taccaagatg tcgccatttt tctttcaacg
     2221 ttatcgtact ggggatttaa tggcccatgc gacgaatgat attacagcta ttcaacaagt
     2281 tgcggggatt ggcgttttga ccctatcaga ttctgttcta acagggggaa cggttattgc
     2341 gacaatggca ataacgattg attggcgcct aaccttgatt gcattacttc caatgccgtt
     2401 tatggtactc ggaagttcga ttttaggtaa aaagttacac gaccgtttcc acggggcaca
     2461 agctgctttt tcaatgttga atgataaaac gcaagagagt atttctggca ttaaagtaac
     2521 acggacattt ggacaagaga aagaagatat tcaagatttt gcaaaacaaa ccaaagaagt
     2581 cgttcaaaaa aatatttctg tcgctaaagt ggatgcgatg tttgatccga tgatttccat
     2641 tattgtgggg atttcatttg ttctttcact aggatttggc gcgaaattcg ttgtggatgg
     2701 agagttgact attggacaag tgattgcttt ttcgaactac ttattcttat taatttggcc
     2761 gatgttagca tttggatttt tgtacaatat tattcaacgc gggaatgctt cttatgatcg
     2821 tgtgcaacat ttactcgccg aaaaagaaga tgtacttgac caggagggcg cactagatac
     2881 ggttccagtt ggggacttac aagttgcaat ggacaaattt acctatcctg atgagagtga
     2941 accagtcttg tcagatattc attttgaatt aaaagctggg gaaacactgg gtattgttgg
     3001 tcgaactggt tctgggaaaa catccttatt aaagctttta atgcgagaat atgatacgta
     3061 tgaaggtaag attgcttttg ctaacgtgaa aattcaagac tatacggttc gagctttacg
     3121 agaagcaatt ggctatgtgc cgcaagatca gtttttattc tccacaacgg tacgagataa
     3181 tattcgtttt ggaaaaccag atgcaccgca agaagaagtg acgaagattg caaagcttgt
     3241 ggctgtagat gaagatattc ttggttttga aaatggctat gatacgattg tcggcgagcg
     3301 cggggtttca ctctctggtg gtcagaagca gcgtcttgct atcgcacgag cgctaattat
     3361 gaatcctgaa ttgcttattt tagatgatgc actttcggca gtagatgcga aaacagaaga
     3421 acaaatttta gctaatttaa aagagaatcg ttcggataaa acgacaatca ttagcgcaca
     3481 cagacttagc tctgtcgaac atgcgaatct aattatcgtg attgataaag ggcagatcgt
     3541 ggaacgtgga acgcataagg aactaatggc tttagatggc tggtatgcag aaatgttcca
     3601 cgagcaacaa ctggaagaag cactagaaga agggggtgca gcagatggaa gcgatgaatg
     3661 aacaagatga aatgttagtg atgtccggta aagaacatcg cgaggtttta aaaagaatgc
     3721 ttagttatac caaatatcat attccgagtt tgatttggac aggtgtgctt gttcttctcg
     3781 taacgcttgc ggatgtcttt gcaccaatct tgattaagat atttttggat gattatttaa
     3841 caccgatgaa tttggaaatg caggctttgc taattcttgg tgcgggatat ttgggactta
     3901 cgattgggaa atcagttgtt tggtatttcc aactgctgtt cttccaaaaa atcgcgcttg
     3961 aaattgtgca acaaatgcgg attgatattt ttacaaaact tcattcgcta ggtatgcgtt
     4021 attttgacaa aacgcctgca ggaagcattg tgtcgcgcgt gacaaatgat accgaagcgg
     4081 tgaaagatat gtttattaat gtgctttcaa cagcgatcca aagtttgttt atgcttgtag
     4141 ggatttatgc ggcgatgttt gcgctcaatg ttcaattagc gttatatagt ttgctgttat
     4201 tcccacttat tgtctttatt atttttgttt accggaaata cagttcgcag ttttaccggg
     4261 cgagacgaga aaaattaagt caattaaatg caaaaattgc tgagtcgatt tcaggaatgt
     4321 cgatagttca acaatttaat caagagcgtc gtttagtaaa agaatttgag aaaatcaata
     4381 aagattacta tgacgtcgga atgaaaaata tcaaatttaa tgcgctatta cttggaccgg
     4441 cgattgattt gatttacgcg ttggctgtag tgattattct tagtttcttt ggtgcagagt
     4501 cattaatagg accggtagcg attggtacaa tttatgcctt tattagttac tttgatcgtt
     4561 ttttagaagc tatttataat gtaatggaac ggctagcaat gtatcaagag gcgattacgg
     4621 cggcttcccg agtatttcgt attatggatg aaacagaaga agtgccagcc caattgaacg
     4681 atccagaggc aaaaatcaca cgcgctaaaa ttgagtttaa agatgtttcg tttgcttatg
     4741 aaggtgggcg tgacgttctt aaaaatatta gctttacggc tgaaccagga caaacggtgg
     4801 cgcttgttgg ccatactggg agcgggaaaa gttccattat caatttaatg atgcgttttt
     4861 atgaatttga acgtggcgat attttaattg atggtaagtc gattaagtct cacgaaatta
     4921 cagaactgcg taagaaaact ggactagttt tgcaagatag ttttatgttt tatggggata
     4981 ttaatacaaa tattcgcctc tacgataaaa gcattacaga tgaacaaatt gtggatgctg
     5041 cgaaatttgt tcaagcggat ggctttattc aaacattatc cgatgagtac aaccataaag
     5101 tgattgagcg aggggcttcg ttttcaagtg ggcaaagaca gctgatttca tttgccagaa
     5161 cggttgtgac gaatccgcaa attctcgttt tagacgaagc gacagcgaat attgatactg
     5221 aaacagaaag cttaattcaa actgggttaa aacgaatgag agaaggacgt acgacgattg
     5281 cgattgcgca tcgactttcg acaattaagg atgccgattt aattttagtt ttatctaaag
     5341 gacgaattat tgaacgtggt acacatgata cattaattgc agaagaagga gtgtaccatt
     5401 ccatgtatca attacaaaat agcggaatgg atttagacga agcactttaa gcagagaagt
     5461 ttatttcaaa cggtaaaagg aatataatga ggagcgaagt gttacagcag attagtaggg
     5521 ggaattaaaa gtgtcattaa tcatttcaat tatcattaca cttgtttttg gagctggaat
     5581 tatcatgata agaatgaaag catcgaagcg tccagcaagt gtgaaaggga ttatcatacc
     5641 accaattatg atgtcaacag gcgctctcat gtttgttatt ccttttttcc gtgtttcgtg
     5701 ggtagatatt ttagaagcta tagcaatggg gcttgtgttt tctgttattt taatttggac
     5761 aacaaaattc gaaattcgtc ataagtacgt atttattaaa cgtacaaaag cttttccagt
     5821 tattttgatg ggactgttac tcattcgaat cttcatcaag tactggatta gtggtagtct
     5881 ggaagtggga gagttgtctg gaatgttctg gataatggcg tttgcgatga ttgtaccttg
     5941 gcgaattgtg atgtatttcc aatataaaaa taccgaaaaa gagcttaata aagtagaagt
     6001 tagtggagag tacgaataat agtgaaagca ttttctaaaa cagcttgaat tattccgtat
     6061 gaatagctta taatgaataa tgttacatcg tgagtaatgt tacttgccgg atgggtgaag
     6121 catatccgag actgacgcgg ccagttacaa aagggcttcc gagtttggct tgaaaaaaag
     6181 gaggacatca tcttgaaaaa atggttatta gtagttttaa ctttagcact aggattgtcg
     6241 cttgcggctt gttccggttc taacagttct gacaaaaaag aagacacaaa aaaagaaaca
     6301 acaagtgata aagacaaagt actaaattat tacatggact tagtagacgt tgttaatgaa
     6361 aacaatggcg attacaacgc ttatgtagga gcagttggcg cagatcctaa accatctgaa
     6421 gcagaccttg cagctcttgc gaaaccagct agtgaatcag cacttaaagt atctgaagca
     6481 cttgctagtg aaaaaacacc agaccttggt aaatccacag atgatttcaa agcagctgtg
     6541 aaacaattaa gtgatgctta caaattagaa gcagacgcac ttaaagctag tggtcgtgat
     6601 acaacaaaag cagacgaagc gatggcaaaa gcggacgaag caattgctgg cgtattaaaa
     6661 gatgctggac ttaatccttc aagcattaca actgatacag cttcctgata ataaaaaaga
     6721 cagtttccta atggaagctg tcttttttat tatttatttt ttgtttgatt aatttcattt
     6781 tgaagttgtt caaaagtcgc cattaattct tgagatttaa cttctagtag ctctttttgg
     6841 tcaagttcgg tatcattgaa taataccgga tcgccaaaac gaataatgat ttttttgcgt
     6901 tttaaaattt ctccaaatgt ttttggccca tcataaacgg caggtagcat tggaactttt
     6961 gctttatgag cgatagttac tgcaccgcgt tttaaatgaa ggttggtcgt ttttctagtt
     7021 ccactcggga aaatcccaac tactttaccg gattttaaca tccggattgg ggctttaatg
     7081 gcgcttggtc cggggttatc gcgattgact ggaaaggcgt taaggtgcgt catgagccag
     7141 ttaaggaatt tacctttgaa aagctcttgt ttcgccatat aatgtaccgg tgttggcgat
     7201 agggcgaaac caaggtataa gatttcaatc catgacgtat gcgtggacac aacaacgtat
     7261 ggtgcttcaa tgattttgtc tttgttttgt acttgaaatc gtccaccaat aataattaaa
     7321 ataaaatgaa cgaggttttt tgcgaaatga taaaacaact tcttcactcc cagtattgct
     7381 agttattttt ttaaactata tctagtatac ttaaaattga cgagttttgc attaaaaata
     7441 aataatctct gagaaaaaga aatgaggtaa ccgatgaaat ttttacatac agctgatttg
     7501 catttaggaa aaattgtatc tggcgtatcg atgctagcag agcaagaata tattttggca
     7561 caaataacga agattgccga ggaagaacaa gtcgacgcac ttattttagc aggagattta
     7621 tatgaccgcg ccgtgccgcc tgcggatgcg gtgaaagtgc taaatgatat tttagtgaaa
     7681 tggaatgtag aactaggtat tccgatattt gccattagcg ggaatcatga cagtgcggag
     7741 cggcttgctt ttggaagtca gtggtatgaa agtagcaagt tgtatatgaa aggaaaatgt
     7801 acctcgcagt ttgaagcgat ttcttttatg gatgccgaag tgtggcttgt accatatcac
     7861 gaaccagcaa ttattcggga agcttttgca gataattcga ttcgcagttt tgaggacgct
     7921 atgcaagccg tgacgaaaca aattcggtcc aaatgggata caagcaaggc gcagattttg
     7981 gttggacatg cgttcgtttc tggcggtatt ccgagtgatt ccgaacgaca actagcaatt
     8041 ggaaatgtgg accgtgtttc tacggattgt tttgatggtt ttacatatac tgcactcggg
     8101 cacttgcacc atccgcatgc gattcggcac ccgtctatct tttatagtgg atctccttta
     8161 aagtattcat tttcagaagc aaatgatcac aaaagcgtgc ggattgtgga actggaagga
     8221 aaagaactgg ttagcgtgac ggagcgcttt ctaacaccaa aacatgatat gcgcattatt
     8281 tctggaacac tagcggaact gacagaaaac ttagtagaaa atcctgatga cttttttcaa
     8341 gtgaatttaa tggatgaagg tgctttaatt gatccgatgg ggaaattacg ccaattttat
     8401 ccgaatattt tacatttaga acgtaaaaaa caaacattaa aagaaacgca agataacttt
     8461 gaagaaatca tgaaaaaaga tgatttagag ctatttggtc aattttttga acatgttaat
     8521 gggacagaat taacggaaac acaaaaacaa aagttagcgg atgtttttga acaagcgagg
     8581 aaggaggatg cggaatgaga ccgattaaat taacgatgca agcttttgga gcctatgcca
     8641 aaaaagaagt cattgatttt gaaaagcttg gaacggagca aatttttgtg atttctggta
     8701 aaacaggagc tgggaaatcg acaatttttg atgcgattag ttttgcaatt tttgggaaag
     8761 cgaacacatt tgatagggaa agtttttcga tgcgaagtca ttttgcgacg gataaagaaa
     8821 taacggaagt aacgctagct tttagattga aggacaagat ttaccaaatt agccgcattc
     8881 ctcagcagga aattgccaaa caacgcggaa acggaacaac cacttcgccg caaaaagcag
     8941 aattatatga gttgattggt gacgaaatga agttgcttgc aagttccgtg cgcgatgtta
     9001 atgcaaaaat ggaagaatta attcaactta atgtggatca gtttagacaa attttgatga
     9061 ttcctcaagg cgaatttaga gaactgctcg tatcggatag taaagaaaaa gaagtcatat
     9121 tgcaacggtt agcgcatact gcttactatg aaaaagtgga aaatttgtta tgggaaaagc
     9181 agaagcaagc cgaaatcttg gttgtagaag cgcgtaaaaa agtagcggaa cttgctgaac
     9241 ttagtttacc ggatggggaa gtttctggaa agacaacgag tgaaatcagc gtgttgcaaa
     9301 acgaggccat tcaaaaagaa caagcaattt taacggaatt agaaaataaa ttaagtatta
     9361 ttcggaaaca aacaagtgaa gctgttgaaa aagtgacgct tgcgaaagaa caactgcttg
     9421 attggcaaaa tttggataag tatacagaag aagttgcgac actagaagcg gagaaagatt
     9481 tttatcaaac aatagaagtt cgcatggagg ctgcgaaaag agcaagcaac cttcaatccc
     9541 aagatgcact ttgtattcgt ttaaaagaac aattagaaac agccgaacaa acagaaaaac
     9601 aagtagcact tgaggcagaa caggtaaaag cccaattttc acatgcgaaa aaacaaaaag
     9661 aagctcttgc tgaaaaagaa gcagaattag aaataaacaa acgaacactt ttccaattag
     9721 aagaaatgga accgaaaata ttggaattag aaacagtctt gatccaaaaa agacgcgccg
     9781 aattagactg gaaaaaaaca acgacccttt tagaaaaaat aatcgacaag gaacaaaaaa
     9841 tagccacaga actgcaatca gttgaggcgc gattagcgga aataaacaaa gccgagctca
     9901 tgtatttaga agttattaac aaacggacaa cattagaagc caggatagag aaagaacaag
     9961 aattggttaa taaacggata aaaatggagg agtgggccgc agccaaacaa actgaagaac
    10021 aaacattagc acaactttta atagaaaaag cggaaatgga aagaacgatt aaacaagaag
    10081 aaacaaaact agaaaaagaa caaacggcaa caatcgcagc gcatttgcat gaaggagatg
    10141 cttgtcctgt ctgtggttca cagtcacacc caatactcgc gaaatttgga gaaacagctg
    10201 accttgaaac actcgaaata gcaaaagcaa agctacaaga aaaacaatta gtgattacta
    10261 cgacggaaaa agctatcagt caactcgaat ggcaacttaa tgaatgggca gatatgaaag
    10321 agcaaagttt agccgaaata caacaaacat tagctgaaaa tatccaacta gctactaatc
    10381 tgagagagca aataacccag ttgcaatccg aagtagctca aaaagaaact gtccaagcga
    10441 cattagaatc attgaaaaac agacaaaatg aaacgctaac cgaaaaaaat aagatggctc
    10501 tcgaagtaga aaagttgcat caacaagtgc aactaacgga agggaaacga acttatttgg
    10561 aacaatccat tcccgacgag ttgcgagata aggctgtttt cgataacaaa atgaaagaac
    10621 taagctcaaa aatcgaaaca catatcaaac aagccgaaca gattgatgcg ttgtttagac
    10681 aggcagaaaa agaaacaacc agactagaat ccacgttaca ttcagcgcaa aaaacaacgg
    10741 tggatgcgaa agaagcctta caagtacagc gcgaaatttt caaagaagcc atgaaacaaa
    10801 atgatttttt atcctatgat gcgtataaac aagctttgtt atcagtagaa gaactaaaaa
    10861 acttagaaga aaaattggcc gaatacgagc gaaaacgcca tttagctgta tcacgccaag
    10921 ctgatttaaa agaaaaactc caaaacaaac aaaaaccaaa tatggaacaa ctagaattca
    10981 ttatgaaaga gaaacaactc gaacttagcc aatcagaaga aaatacaatg aaacaacgcg
    11041 aattcgttgc aaaaagaaaa gaacttgtcg aaaactacca aaacagtatt caggcagtgg
    11101 aacaagccga agaaaattat gcggatattg gcttactagc tgatgcagcg cgtggtaaaa
    11161 atgcccggag attaacgttt gaacgatata ttttagcgat gtttttagac acgattattc
    11221 accgcgccaa ccaccgttta tccaaaatga caagcggtcg ttttgaacta cagcggaaaa
    11281 tggaaaaagc aaaaggaaat gtccaaagtg gcttagaact tgaagttttt gatgagtata
    11341 caggattaac tcgacatgta aaaacacttt cgggaggaga aagcttcaaa acttctttag
    11401 cgcttgcatt atcactcgca gaagtcgttc aagaaatggc aggtgggatt tcacttgaaa
    11461 cgatgtttat tgatgaagga ttcggtacgc ttgatcctga atcacttgaa gccgctgtag
    11521 aatgcttact ggaaacacaa gaaaatggcc gcttagttgg gattatttcc catgtaccag
    11581 aactaaaaga acgaatttcc gcaaggctag aagtaaccgc aacaaatcac ggaagtacca
    11641 ctaaatttat tactgcaagt agctaaaaga ccgcatgcgt tgccgtccct cgtcttttcc
    11701 tatataatag tagtttagag taatggacgg ttttgggagg aagaaagtaa tggagcactt
    11761 tacagcaatt caaaataaaa tgatcccata tagtgtgaag caggctggaa agaaactgat
    11821 ggaagacgga gaaatcattc agtttcgtga aaaagatgca tcagaccatt tttcaacgta
    11881 ttttattgat caaaatgtcg tagaagatgc aggtaatgaa aattatgcgt gtagttgtgc
    11941 cgattttcaa ttgaacgcga tttgcaaaca catctacgca acccatctga aaatggaaaa
    12001 agaaaagcaa aaagcagcca aacaagattt taaaaatcga attctcacgc aagaatcaaa
    12061 tacacttctt tccctttttc aacaaaatat ggcgcaacag ctcgaagtag aagaggacaa
    12121 tacgaataaa acgccactcc aaacgcagta tatcattcgt ttaaaacccg atgattctag
    12181 ttatatcatg actattgaag tcaaagttgg cacagaacgg acctatgttg taaaaaatat
    12241 gaatacattt ttagccgcaa ttcgcgacag gcagtggctt gttttcacta agaattttgc
    12301 ttacgatcca aacgagcatt tctttcttga ggaagacaaa caaattttgg ataaactact
    12361 gcaaatcagt gaaattgcca aaatgtatga tacagattct ttttattggt ccaaatctta
    12421 cgcagaagag aaaaacctaa cgattccacc gagtatggcg agcgacttgt tagaactact
    12481 cacagaacgc gatacgacgt gcattattat gaaagaacgc gtagaagata ttaaatatcg
    12541 cggtatcaat gtgcgccacg acaaccttga tttcattttt gaactcaaaa aaagtgcaga
    12601 agataaatac caactagaaa tggaagactt acaacaagca atcttttttg aagcctacca
    12661 acttcttttc tttgacggta cctttttcat accggcaaaa gaagtatggg aatcgttgaa
    12721 accattgatg gaatttcata aagtaacgaa aaatgaagtg gtgcaatttt cagagtcgca
    12781 attaagtgaa gtcatttcct acgtattacc agccttacag aaaagcggga agttaaagct
    12841 ggatgactcg attgaagacc ggattacgca acagccactt gattgtaaat tattcattgc
    12901 actcgaatac ggggagcata cgttgcgact tgaatatcat tatggcaatc agcttttcga
    12961 tccatttgca acatcagaag aagaaaacga aaaaatcatg atacgtgatg tcgaaaaaga
    13021 agcccgtgta atgaatatta tcgaaagcgc ccctgttcat ttttctggaa caaaaatggt
    13081 cgtcaataaa caagaaaagg atttgtatca attttattat cgcaccattc caaaactagc
    13141 agagtacgca gagatttata tggaagacgg tctcgaagaa atggtagaag agaatgtgcg
    13201 cccagttacg acactggatg tttctggtga taacgattat ctttctgttt cgtttgattt
    13261 caaaggtatt ccggaagaag aagtgcaaaa tgtcctagaa tctttgcgtg aaaaacgtag
    13321 ctatcaccgt ctgaaaagtg gccgtttctt atcgcttgaa tcagaaaact acaaacaaat
    13381 ggaagatgta ctccaaatgt tagaagtgcg taagaaagat gtccaagcaa acatgcaagt
    13441 accgctttat cgtgggatgc aaatttatga tattttagga gcaggaacac aagatgaaca
    13501 tcataaattc agtcgttctt tccgcgaatt gcttacagat attacgacgc aatccgaaga
    13561 cagttttgcg ttaccaaaag gattaaaagc agagttgcgc gattatcaac taactggttt
    13621 cgaatggatg aaatcacttg cgaagtataa tcttggtggt attttagcag atgatatggg
    13681 gcttggtaaa acggtgcaaa cgattagttt tctagcatct gagttagaag ataaccctaa
    13741 cttaaaacca gtcttaatta ttacgccagc atcactactt tataactggc aaagcgaatt
    13801 agaaaaattt gcgccaacta ttccagtgac cgttttacat ggaacgaaac aatcccggat
    13861 agccgaaatg gaagaaatga agcatggcca tgtctacttg atttcgtatc catcgttacg
    13921 ccaagatatt gtccattttg cagatgtcgc tttttcaagt gttattattg acgaatcaca
    13981 agctatcaag aattatcata cgaaggcctc tcaagctgtg cgcgctttga aacgcaatca
    14041 tgtattcgcg ctcagtggaa cgccgcttga aaacagcatc gatgaactat gggctatttt
    14101 ccaaacatta atgccaggat ttttcccttc attgcgcaaa tttaaagaaa taccttacga
    14161 caacattgct aaaatgattc gtccattctt actacgtcga ctaaaacaag atgtcgtcaa
    14221 agaactacca gataaaattg aaaccaacct ttattctgaa ttaaccgatg agcaaaaaac
    14281 aatatactta gcttatttag aaaaaattca agctgattta gaagcaagca atggtaatgc
    14341 ttccgaagaa cgaatcaaat tactcgcagg attaacccgt ttacgccaaa tttgctgtga
    14401 tccgagcctt tttgtggaaa attatcaagg tgaatctggt aaattactac agttatttga
    14461 tacaatacaa acagcaagag aaaacggtaa acgcattctc ctattttccc aattcacggg
    14521 tatgcttgga attattcgcc aaaaactaga agaagatgga caaacacttt tctacatgga
    14581 tggtaaaact ccatcgaaaa caagactaga tatggttaat gcttttaacg aaggggagaa
    14641 tgatattttc ttgatttcct taaaagctgg tggaaccggg ctcaatcttg ttggcgcgga
    14701 taccgtgatt ttatacgatt tatggtggaa tccggctgta gaagaacaag ctaccggacg
    14761 tgcacatcga atcgggcaaa aacgcgttgt ccaagtgttc cggatgatca ctaaaggaac
    14821 gatagaagaa cgaatttttg atttgcaaaa gaaaaaacaa gcgctagtgg acgaactaat
    14881 ccaaccaggc gaacaaatgc taggaaaatt aagcacagaa gaaataaaac aaatcttaca
    14941 attggataat ggaagggatg acaaataatg aaaaagtggg aagtattcgc agttcaaaat
    15001 gtcgaggcag cagaggaaat tatcaacaaa ctagtaagcg agggatatga aaaagaagat
    15061 atttctgttc tagctaaatc aaaacataac aaaaacttag aaactttagc agaaaaagaa
    15121 aatatcgaaa tcgaacgtcc tgtaaatgaa gaggctttcg gtattatttc tggaatcctc
    15181 caatctctaa gtggagccat tgttattcca caagcttaca atcccaaata tggtgctttg
    15241 tatgctgccg gtccctttgc caaatggttc tcgaaaacag acgataaatc ggtaaaaaga
    15301 ttattagaag actttgattt aacagaaaaa caagtagata aaatgattga aaatttacat
    15361 gcagataaca tcttaatttt tgcgagataa tatcggtgaa aaaggagaag tttatgcaaa
    15421 ttaaggaatt tttgattagt cgtcgttcag aattagtgaa tatgttttat gaaaattatt
    15481 atattgaaac ggatgaattt aaattaagac ttcgtggcgg ggaagaggaa gaagctattc
    15541 gctcgctaag cactgcatca tgtggcatga ttattgatgt cattaccggc gtgaaagaac
    15601 gagattttga aagtatcggt aaaagacgct tcaatgataa gacggatatt agaaaaattc
    15661 atcaacatat gagtgaagtt gaaaaatata tcattactag cttagtgaag tggaaggaag
    15721 cagaaaatgt tttctatacg gatgctgaca ttatccaatt tatgcttgat ataaaagata
    15781 cgctttcatc cattcaacaa caattgttag aaggatttat gcaagaaaat agaaatcaag
    15841 tagcagctca gcgaaaagaa atcattcaat tatccacgcg aattattcca ataaatgatt
    15901 ctattggcgt tttaccaatt gttggtagtt tagatgacga tagaggttat tttatgaaag
    15961 agaaagcagt agaatctgcg gataagctga atttagatac gattgtcatt gatttttcca
    16021 gtgctgtatt aaaagatgat ttcgcaacca aacatatgga ggatatgatt caatctttta
    16081 aattaattgg cttagtacca atactttctg gtatgcgccc aagtttcgct caacgcacaa
    16141 tccaagttgg ttcaaatatt tccaaactcg aatcatttgg ctctttagaa caagcattaa
    16201 ccaatttagg tgtttaaagt acagatgaat ggcactcgtt gtcattcatt tttttgctat
    16261 aagaaaaagt tatcgaatta tagcggattc tctttgttta cttatcgccc gtttttaagt
    16321 acaatagatg agagagacca atcgtttcaa gaattgaagg aggaaacgtg gatgactaat
    16381 tggaaagaaa aagcaaaagc atcatttcaa ctaaacgaca aaacgtatca ttattacaaa
    16441 cttaaaacct tagaagagga caagcttaca aacatcgaga aattacctta ttctgtacgt
    16501 gttttacttg aatccgtttt aagacaagca gatggcagag taattaagga ctcacatgta
    16561 gaagatttag cccattggtc taaagatgga aacgaaggcg aagtaccatt caaaccagcc
    16621 cgtgttattt tacaagattt cacaggtgtt cctgcagtgg ttgatttagc ttctttacgt
    16681 aaagccatgg cagatcttgg cggcgaccct gaaaaaatca atccggaaat cccggtcgat
    16741 ttagtcgtcg atcactcggt gcaagtagac agctatgcga atccagaagc actgaaaatc
    16801 aatatggaac tcgaattcaa gcgcaacatg gaacgttacc agtttttaaa ttgggcgcaa
    16861 aaagcatttg ataactatcg cgcagtacca cctgcaacag gtatcgttca ccaagttaac
    16921 ttagagtatt tagcaaacgt cgttattgcg aatgaagtag cagacggcga atttgtagcg
    16981 tttccagatt cccttgtcgg aacagatagc catacgacga tgattaacgg tattggtgta
    17041 ttaggttggg gcgtgggcgg tattgaagca gaagccggca tgctcggtca accatcttac
    17101 ttcccaattc cagaagttat cggtgtgaaa ttgctaggtg ctttaccaaa cggcgcaaca
    17161 gcaactgatt tcgctctaaa agttacccaa gtcttacggg aacaaaaagt agtaggtaaa
    17221 tttgttgaat tttatggtcc gggtgttgcg acacttccgc ttgctgaccg tgcaaccgtt
    17281 gcgaatatgg ctccagaata cggcgcaact tgtgggttct tcccagtaga taaagaagcc
    17341 cttaattatt taaaactaac tggccgtgac aaagaacaaa tcgaattagt agaagcttat
    17401 ttagaagcaa acgatttatt cttcacacct gaaaaagtag aaccaaacta cacgcaaatc
    17461 gtggaaatcg atctttccgc gattgaacca aacttggcgg ggccaaaacg tccccaagat
    17521 ttgatccctc tttcgaaaat gaaagaaaca ttccgggaat cgattactgc caaagcaggc
    17581 aaccaaggtt tcggactaga taaatcagcc ttagacaaag aagtaaccgt tacttttggt
    17641 aatggcgatc aatccactat gaaaactggt tcggttgcaa tcgcggcgat tacaagttgt
    17701 acgaacactt ctaacccata tgttatgtta agcgctggtt tagttgctaa aaaagcagtc
    17761 gaaaaaggct tagaagtacc aaaattcgta aaaacatcct tggcgccagg ctctaaagtt
    17821 gtaacaggtt acttggaaaa agccggctta cttccatatt tagaaaaact tgggtttgac
    17881 cttgttggct atggttgtac gacgtgtatc ggtaattctg gtccgttaaa agaagaaatt
    17941 gaagaagcaa tacaagacag tgatttgctt gtttctgcgg tattaagtgg taaccgtaac
    18001 tttgaagggc gtattcatgc acttgtgaaa gcaaacttcc tagcttcacc accactagtc
    18061 gttgcctatg cgctcgctgg gacaacaaat gtcgacatgc taacagaacc aattggacgc
    18121 ggtaataatg gcgaagaagt cttcttagac gatatttggc caagttcaga agaagtgaag
    18181 gcattagtag aagaaacggt aacaccagaa cttttccgtg aacaatatgc tcatgtattt
    18241 gatgaaaacg aagcttggaa tgcgattgaa acaacagaag atgccctata caaatgggat
    18301 gaaaactcta cgtatattgc gaacccacca ttctttgata atttagcgaa agaagctggc
    18361 aaagtagaaa gcttatctgg tctccgcgtt attggtaaat ttggtgattc agttacaact
    18421 gaccatattt cgccagccgg agcaatcggc aaagataccc cagctggaaa attccttcaa
    18481 gaagaaggcg tggcaattcg tgatttcaac tcatacggtt ctcgtcgtgg tcatcatgat
    18541 gtgatgatgc gcgggacatt tgcgaatatt cgtattaaaa atcaaatcgc accaggtaca
    18601 gaaggtggct atacgactta ctggccaact ggcgaagtga tgtcaattta tgatgcttct
    18661 agaaaatata tcgaaaataa tactggttta gtcattcttg ctggtgacga ttatggaatg
    18721 ggatcctctc gtgactgggc tgccaaagga acgaacttgc taggaattaa aacagttatc
    18781 gcgaaaagct atgaacggat tcatcgttct aaccttgtta tgatgggtgt tttaccactt
    18841 cagttccaac caggtgaaga cgcagaaacg cttggtttaa caggttcaga aagcttgcaa
    18901 gtggaaatcg gtgaagaggt agcgccaaga gaccttgtaa aagtaaccgc tgttcgtgaa
    18961 gacggctcaa gcttcacttt tgaagcactt gcacgttttg actctgaagt agaaattgac
    19021 tattaccgtc acggcggaat tttaccaatg gttcttcgtg gcaaattgaa ataactttaa
    19081 aaagaggcga gcaataaagt tcgtctcttt tttatttttg cttgcaaaaa tagaacgtat
    19141 gttttattat tggttaatag gaggcttgag cgaatgaggt atcagaaaat cagttttata
    19201 gtgactggaa taattgcagc agtaataggg tatcttattt ttacgagcaa ctatcacccc
    19261 gatgttccaa actggctact ctttttattt ttagcattaa gcattgctgt ggcagttagt
    19321 cagtggaaag agaaacgact aatttggagt tgcgtcggac tatttgtggc tgttttgatc
    19381 agtgtgtatt acattttaac tatataggag gaactcgctt tgtctgaaga attacgttgc
    19441 ccttggtcga ttaatgaccc gtttgaacta gaatatcatg atacagaatg gtgtgttccg
    19501 agtaaagacg acacatattt atttgaaatg ctcaatttag agggagcaca agctggactc
    19561 tcatggagat taattttaca taaaagaaaa gcctatcaag aagctttttt tcactttgat
    19621 attgataaat gtgcacgcct aacagacgat gagctggcga cgattgtcga agaagcggct
    19681 attgtaaaga atcgccttaa agtgaaagca gttcgtacaa atgccctagc tacgcaaaaa
    19741 gtccaagctg aattcggctc atttgcaaac tatatttggg gttttacgaa taatgaccgt
    19801 attattaatg aatggcaagg catgggagag gtccctgcaa gcacagaact atcagaaaaa
    19861 atcagtaaag atttaaagaa acgtggtttt aagtttgttg gccctgtaat tgtgtattct
    19921 tatttacaag ctattgggat tttggatgac catttacgtt catgcccatt tcatacattt
    19981 aatagggagg cgacgaaatg attccagcga aattaaaaca aggggatgaa attcggatta
    20041 ttgcaccaag tcgttctatc ggtattatgg ctgacaatca agtggaaatt gccgttaagc
    20101 gcctaacgga catgggtttt aaagtgactt ttggcgaaca tgtagcagaa atggattgca
    20161 tgatgagttc aagcattcgt tcgcgagttg ctgatatcca tgaagccttt aatgattcga
    20221 gtgtcaaagc gattttgacg gttattggtg gttttaatag caatcaattg ttgccatatt
    20281 tggattatga gttaatttcg gaaaatccta aaattttatg tggtttctcc gatatcacgg
    20341 cattagcaac cgctatttat acgcaaacgg aacttatcac ttattcaggc gctcattttt
    20401 caagtttttc aatggagaaa gggctggact acgtaatgga ctcatttagc aagtgtttat
    20461 tgcaaaaaga gccgtttgcg cttaaagaaa gtgctgcatg gagtgacgat gaatggtatt
    20521 tggaccaaga gaacagaaat tttattccga atgagggatt agttgttatg caacctggag
    20581 aggcagaagg aatcatcatt ggcgggaact tatgtacgct taatttactc caaggaaccg
    20641 agtacatgcc taacttagca ggtaccattt tatttattga agatgatttt atgactgttc
    20701 cagaaacatt cgaccgggat ttagaatcgc tattaagtca acccggtgca ggtgagatag
    20761 aagggctggt aatcggtcgt ttccaacaga agacagcgat gacagcggag aaattagcat
    20821 atattattga aacaaaaacg gcattacaaa aaatcccagt tatatctggt gcggattttg
    20881 gtcatacaca gccaattgcg acattcccga ttggcggaac tgcaagaatt gatacaaatc
    20941 agaccgataa aattcaaatt attaggcatt aaaaaaaggc tgtccaatgc ggacagcctt
    21001 tttaatattt aacttaaagc gacatctcgt tttttgaata agaagaaagt gaagaaaagg
    21061 ataatcgctg tataaacacc tagaccggcg attatttgcc aatctgctag gccaccagcg
    21121 attttagaac cgccaactgt gtcatttagg ctgagcaagt tgaagataat ccatttcatc
    21181 caatcgtatt tttcgatagc gagaggtagt aattggcgaa taattccacc ggagaatagt
    21241 acaccaacgc cgacaccaac tgcaagtgct tgtgaacgaa cgacagagga gaagaagaaa
    21301 gcaatagttg cgtatacgat catcagtaag aagttcgtac caagtagcat ccacgcatgt
    21361 tcgaaagcag tcattgcacc cgttgaaggg gagagcggca taaaaataga ttgttttggt
    21421 aaaataaatg aaaagataaa gctagctaca agtaatgtga tagagctaat aatgctgtaa
    21481 acgatacaca ttacgtattt ggaaaatagt atctgacttc tagaataagg acgtgtcagt
    21541 aaaagtttga ttgtcccacc agaaaactct gttgcaacga tgatacttgc tacaacaaca
    21601 acaagcattg tcgcaacggc tcctgagcta cctaatgaag cgaagaaatc tgcgcttgaa
    21661 atacctgctg aattactagc gggtttttca tctgcatcga cataagcttg gtaaaaatca
    21721 atttgttttt ggatagtttc tttggcttct tttgttggag ccgcttgttc ttgtgttttt
    21781 aagtaagcaa cagaatcagt taaagataac gtttcagatt tatacgtagg attaccatct
    21841 ttatctgcgg agttccaata ttcttcttcg ctaaccgggg cacctttatc gtcatagtaa
    21901 gcggtaatac cagcattgct tgcgtcgccg ccttcgatac cactagtatc tattttacta
    21961 acaaaaaaca taagaagagc aagagctaaa actgctacaa ataagacgat ttgcataatc
    22021 caacttgatt ttctggaaaa taatttggta aattcatttt ttactaatgc tatcatactt
    22081 ctgcacctcc acctttagtt aattcgagga atcgttcttc aagggaggct tgaagtggaa
    22141 ccatttctaa taaatcaata tttgcttgga taagcgcacg agcaattaga tgtacatctt
    22201 cgtgagccac ttcgattttg aatagatcct cattttgagc aacaagcttg actgggagtg
    22261 tagcgagaac ggttttagtt gcttcgggat cgctaacttt tagtttataa gcagcgacat
    22321 gattttcaat taggtcgctc attttttcga tgtgcgttag aacacctttg ttaataatcg
    22381 caaatcgatc cgtaatttgt tggatttcgc taagtaaatg gctagaaatt aaaacagaag
    22441 taccatttgt cgctaaatcg cgaatcagcg ttctgaattc ggccatacct tgtggatcaa
    22501 gtccgtttgt tggttcatct aagataagta aagcagggct atgaattaaa gcttgcgcaa
    22561 cacctaaacg ttgacgcata ccgagagaat atgtttttac tttctgatta attgcgccag
    22621 taagctttac aagttcaacg atttcacgaa cgtgttcgtc agtaatgttt ttttgactca
    22681 tacgtgcgaa ttgctttaag tttgcccatc cagacatata catataaaat tctggatttt
    22741 caataatagc acct
//
LOCUS       DASDYK010000036        21983 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.036, whole genome shotgun sequence.
ACCESSION   DASDYK010000036 DASDYK010000000
VERSION     DASDYK010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 21983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21983
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.036"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            101..955
                     /locus_tag="U0308_001371"
     CDS             101..955
                     /locus_tag="U0308_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009929107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEM2316338.1"
                     /translation="MALKIKWIIAISMIIVLLVVGWFLGTRLTVKKYEVSSAKIEKEI
                     KLVQLSDLHFSEFGDKNENLLHKVANLNPDVIAITGDLFDRQGDSVPKELIKKLTKIA
                     PVYFSPGNHEYDVKNAYEDDYKPFLEKIGVVNLEDQTATIDVGGQKFQMSGLRSSANL
                     DYDYPYYKEGLAEIKKQQDSTYYQILLSHMPDYFELYVENGFDLTLSGHTHGGIVRIP
                     YTNIGAIAPGPQRTLLPDYVYGEHSKDGKTMIISAGLGAGSLHQKAFPRLGNPYEIVA
                     VTIKPATN"
     gene            complement(985..1167)
                     /locus_tag="U0308_001372"
     CDS             complement(985..1167)
                     /locus_tag="U0308_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008475638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FeoB-associated Cys-rich membrane protein"
                     /protein_id="HEM2316339.1"
                     /translation="MFFVSIMVNLLLGGAIFGYTIYAIIKFIKRSKQGKCGGCELEKA
                     CNCESDEHTNLDHIFK"
     gene            complement(1174..3168)
                     /gene="feoB"
                     /locus_tag="U0308_001373"
     CDS             complement(1174..3168)
                     /gene="feoB"
                     /locus_tag="U0308_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HEM2316340.1"
                     /translation="MSQNTYCLLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGT
                     LRSKTGKLIDLPGIYDLNPISRDETVVTRFLLEEKFDCMLNIVDSSQIERNLNLTIQL
                     LEFGAPVVMGLNMIDVAAGRGIHLNIQNLAKQLRIPILPVVARSGKGTDDILSTLSEK
                     HVAPAIPLILPYGEPAEKAITEIQALIKDMIPAKQSRWLAVQFLSKNEVTEEFLATCP
                     ALEQLKHIRTELEIALDGKLENHFHQVRVNYIHDICLTSVEYTRHSDIPLSDKLDKIF
                     THKFFGIPIFLGIMWLIFQITFTWVGAPLSDLLDGFIGGPLTDSVTSFLTAIGASGFI
                     TDLVADGIIAGVGGVLVFVPQILVIFFFISVLEDSGYMARIAVVMDRVMEIFGLNGKA
                     FIPMIIGFGCNVPGIMAARSIEESKERTLTILVSPFMSCSARLPVYALFVGVFFEKHQ
                     ALVVLSLYVIGILMALIVTKILSKTLLKKDNSVFVVELPPYRLPSLKTLWRSTWEKGK
                     GFLRKAGTFIFAGSVIIWLLNYAGPSGLDVPMGESFLAIIGGMLAPLLVPLGFGTWQA
                     GATLIPGFLAKEVVVSTMAIIYAVGESSLGSIVSTFYTPLSAYCFMLFILLYIPCLAT
                     VAAIRKETSSWKWTAFAVAYPLVTAYVLVFLVYQIGSLFV"
     gene            complement(3165..3392)
                     /locus_tag="U0308_001374"
     CDS             complement(3165..3392)
                     /locus_tag="U0308_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HEM2316341.1"
                     /translation="MQLNETAVGEKVRISELKIENAMLKRRLLALGCDEGCDICIKQK
                     GLFGGPCTFETKGQYISIRQCDACAIMVERR"
     gene            3712..4689
                     /gene="pta"
                     /locus_tag="U0308_001375"
     CDS             3712..4689
                     /gene="pta"
                     /locus_tag="U0308_001375"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEM2316342.1"
                     /translation="MSDLFTTIKGQVTGKNVRIVLPEGTDERIVGAAARLQKENIVKP
                     ILLGNKAEIEAKAKEIGVSVEGIAIHEPATDPLFDELVAAFVERRKGKATEEAARKML
                     VDPNYFGTMLVYTGKAEGLVSGAAHSTGDTVRPALQIIKTKPGVSKVAGAMIMVRGEE
                     RYLFSDVAINIAPVAADLAENAIVSAETAEIFGIDPRVAMLSFSTKGSAKSDETEKVV
                     EATALAKEKAPELTLDGEFQFDAAFVPTVAEKKAPGSVIKGDANVFIFPSLEAGNIGY
                     KIAQRLGNFEAVGPILQGLNAPVNDLSRGCNTDDVYNLTLITAAQAVNK"
     gene            complement(4728..5294)
                     /gene="pdxT"
                     /locus_tag="U0308_001376"
     CDS             complement(4728..5294)
                     /gene="pdxT"
                     /locus_tag="U0308_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HEM2316343.1"
                     /translation="MKKIGVLAIQGAVDEHIQMIESAGALAFKVKHSSDLDGLDGLVL
                     PGGESTTMRKIMKRYDLMEPIRAFASEGKAIFGTCAGLVLLSKEIEGGEESLGLIEAT
                     AIRNGFGRQKESFEAELNIEAFGEPAFEAIFIRAPYLIEPSNEVAVLATVENRIVAAK
                     QANILVTAFHPELTNDNRWMNYFLEKMV"
     gene            complement(5296..6183)
                     /gene="pdxS"
                     /locus_tag="U0308_001377"
     CDS             complement(5296..6183)
                     /gene="pdxS"
                     /locus_tag="U0308_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HEM2316344.1"
                     /translation="MEKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVM
                     ALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYI
                     DESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTGNIVE
                     AVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIKTLGKLPVVNFAAGGVAT
                     PADAALMMELGADGVFVGSGIFKSDNPAKFASAIVQATTYYTDYELIGKLSKELGSPM
                     KGIEMSRLNPEDRMQDRSI"
     gene            6307..7752
                     /locus_tag="U0308_001378"
     CDS             6307..7752
                     /locus_tag="U0308_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEM2316345.1"
                     /translation="MWKLAGNSNLPIYLQIVDLIETKIINGELLPEEKLPPERQLAEM
                     FGVNRSTVVRALDELTARAVIIRKQGSGTTVNAEKWGLFAGQSTNWRHYLTQGGFTPA
                     VPYIRQAGVMERADSDQVIDAASGELPLEMTPKMETPSLSWQSFIAEEQQEDEAGYKP
                     LRETIQKQMKEAYGLQTRPEQIFITSGAQQALFLITQCLLKPGDAVAIESPSYFYSLS
                     LFQSAGLRIFALPMDEDGVIISELRDLYHKHRVKMVFVNPTFQNPTGLVMSLERRKEL
                     VKICAHLQIPIVEDDPFSELAALDSQVPAPLKQLDTDNVLYIGSLSKIMGSTTRIGWL
                     IGPTAVIERLALARQEMDFGLSIFPQVLANSVLNTPGYKVHLQQLHHVLKQRRDDLIE
                     AFEAILPNDVVFIKPKGGFHLWVKLPVEFRSIRDFDIFLANDLLVMPGFLFGVKEAVI
                     RVTYARLEKTEARRIAEIIKQILIEKKCEEA"
     gene            7933..9939
                     /locus_tag="U0308_001379"
     CDS             7933..9939
                     /locus_tag="U0308_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2316346.1"
                     /translation="MEQNCKELITYLLLNRQVNLRNVSKNFKVSKEAISAQITQINHL
                     LKSEPILIDHDMIFVTDVCREACYRLLTAEEQQLFSFYEVNIRRKLIMIKLLLHNHYM
                     SLGALADYVYVSKNTMLTDVKSIKESLHEFEIQLDYSRRDGYAVSGSEFLIRNLLAEL
                     IREVVQTPYGKFVLDEKKLITVSEVFLLKKRLEKVESKLQITFTDEQMEELPYILHGI
                     IKRSKVTNKKWTFKIEMYDIKNTREFPIMKEMFWGYDFLSENDLLYLSLQVLASNLVE
                     SALHFSDSEEIAYAVDEFIRLLEMYFATEIMKKNEFKEKVILHVRPAIYRTILGFQIN
                     NPLKKQFIKEYTPTFNIVEKASKPFEKLVGHKWSEEEIVYLSMIVLGWMYQIEETEQP
                     IFRAVVLCKSGTSISKLLLENLKMMFPNIDFQGAYAVRQLSTVARDIDFIFTTVPVQS
                     DATIFVIPSILSKDSRQILREQVDKAIEMDSHKKTKELLAMLKDEIPEENIRLVQAKM
                     ESFFNKKEQPMEKKEPEQMQITEEQVHFLETPLEWEQLVSVAFAPMLERGTVDASYIH
                     TCEEIFYQNYEQMMIGPNIYLPHAKPANGVIEQDIQLMIMKADTKTPENEAVKIMIAL
                     APSEQNKHIPLLLKLNEIFLKPEKLAGILASTNKKKIVEILERG"
     gene            9947..10414
                     /locus_tag="U0308_001380"
     CDS             9947..10414
                     /locus_tag="U0308_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2316347.1"
                     /translation="MDYHDLFQKELTLINSRYENQAELFEYTSKILEKEQYVEPTFRE
                     AVTSREVVFPTGLEMNGIKIAIPHTDTIYVKRPFVLVNKLSTPIPFIQMGTTDKWIDV
                     EVIFMLGIKNPQDQVPLLSSIMEKFMEADFVEQIKTINDSNTLCDFLKKQFGE"
     gene            10420..10695
                     /locus_tag="U0308_001381"
     CDS             10420..10695
                     /locus_tag="U0308_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2316348.1"
                     /translation="MKKVIVACGSGVATSQTVASKVERILKEKGVRATVEAVDIKSLE
                     QHIKTSDVYVAITKANKEFDIPTLNGIAFLTGMGMDEETEKLLNALK"
     gene            10723..12072
                     /locus_tag="U0308_001382"
     CDS             10723..12072
                     /locus_tag="U0308_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HEM2316349.1"
                     /translation="MESLQSVIQFILNLGAAVFVPALMIIIGLIVRMKVRDAVSAGII
                     LGVAFLGMNIVIGFMIEALTPAAQGLAERTGINLSILDGGWTSMATLAWAWPFAFLMF
                     PLQLGINAIMLVINKTKTLNVDLWNVWGKILTAVLIIGVTQNVYLAFIVAGIQIVTEL
                     ILCDANQRQIQELNGIPGVTVSHGMMIFCIFLMPLDWLLKKIPALRKDMDANALKDKI
                     GIFAENHVMGFIIGGLLGIAAGYDVAKTLMLAMQAAAALTLFPMVAKLFMQALSPLSD
                     GISEFMKRKFKNRELFIGLDWPILAGCSEVWVAIVLMVPVTLIFALILPGNGVLPFAG
                     ILNISLCAPALIVTGGNLIRMIILGTITTPIFLYVSTFFAGTITDLAHSTGAISLKAG
                     QQITWSTLEYPVFRYIFAEASQFTILGFIFVAIWVVLLVFYVKMMKKRTIELEKASS"
     gene            12090..13022
                     /locus_tag="U0308_001383"
     CDS             12090..13022
                     /locus_tag="U0308_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase family hexose kinase"
                     /protein_id="HEM2316350.1"
                     /translation="MIYTITLNPAIDRLLFIQGELEKRKTNRVKKTEFDCGGKGLHVS
                     GVLSKFGIKNEALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNG
                     STMIPEAGFTVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKAT
                     GAFLGCDNSGEYLNLAVEMGVDFIKPNEDEVIAILDETTNSLEENVRKLAGKIPYLVV
                     SLGAKGSLCAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLKVATG
                     CSASKVMQQDSSSFDLEAAGKLKNQVSIIQLEER"
     gene            13024..13674
                     /locus_tag="U0308_001384"
     CDS             13024..13674
                     /locus_tag="U0308_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEM2316351.1"
                     /translation="MLYQKEREDLAKIVKTMFDRFETNAAGGNVSVRMNSEHIIMTPT
                     LMSQAKLCDLSPYEILVVDNNNEVVEGDGRVTREINLHRACYVENPKIGCVLHAHPKE
                     SMLFATLGMELPNLTEATQKIGQIPTLEFAPATSPELAEIVRKHVIELGDKAVPSASL
                     LNKHGIVVLDTSLHKAYDMLERIEYNAYIAEKALVFDALGIKKLAHDRELNYNLEE"
     gene            13678..13875
                     /locus_tag="U0308_001385"
     CDS             13678..13875
                     /locus_tag="U0308_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316352.1"
                     /translation="MEKFLFNATLFASALLLMVGIFKSSIPITAISLVLAVVSQHFFR
                     KKYPKQTRSYREIVAAKQKKG"
     gene            complement(13919..15442)
                     /gene="betL"
                     /locus_tag="U0308_001386"
     CDS             complement(13919..15442)
                     /gene="betL"
                     /locus_tag="U0308_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family glycine betaine transporter BetL"
                     /protein_id="HEM2316353.1"
                     /translation="MKKLTSVFWGSGCLVLLAVLFGAFLPKQFEAFTTNIQKFLTSNF
                     GWYYLIVVAIIIIFCLFLVLSPIGSIRLGKPGEEPGYSNKSWFAMLFSAGMGIGLVFW
                     GAAEPLSHYAVQAPGGEVGTQAAMKDALRYSFFHWGISAWSIYAIVALALAYFKFRKN
                     APGLISATLYPILGKHAKGPIGQLIDIIAVFATVIGVATTLGLGAQQINGGLTYLFGV
                     PNNFTVQFTIIIIVTILFMLSAMSGLDKGIQLLSNVNIYVAGVLLVLTLILGPTLFIM
                     NNFTNSFGDYLQNIIQMSFQTAPDAPDARKWIDSWTIFYWAWWLSWSPFVGIFIARIS
                     RGRTIRQFLLGVIVLPALVSVFWFAVFGGSAIFVEQHGNSGLSSLATEQVLFGVFNEF
                     PAGMVLSIVAMILIAVFFITSADSATFVLGMQTTGGSLNPPNSVKVTWGLLQAGIASV
                     LLYAGGLTALQNASIIAAFPFSIVIILMIVSLFVSLTREQEKLGLYVRPKKSQRSQL"
     gene            complement(15610..16980)
                     /gene="argH"
                     /locus_tag="U0308_001387"
     CDS             complement(15610..16980)
                     /gene="argH"
                     /locus_tag="U0308_001387"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEM2316354.1"
                     /translation="MEKLWGGRFQGKSEAWIDDFGASISFDQKMAKEDLAGSLAHVAM
                     LSKCGIIPASEAAEITAGLKILQEKLALGELEFSTVNEDIHLNIEKLLHEEIGPVAGK
                     LHTARSRNDQVATDMHLYLKQAVAEIIQSLKHLRVVLVQKAEANVETIMPGYTHLQHA
                     QPISFAHHLLAYFGMFTRDLERLEESVKRIDISPLGSAALAGTTFPIDRAYSAELLGF
                     SAIYENSLDGVSDRDFIIEFLSNSSILMMHLSRFCEELILWTSHEFQFVELTDAFSTG
                     SSIMPQKKNPDMAELIRGKTGRVYGNLFGMLTVLKGLPLAYNKDLQEDKEGMFDTLET
                     VQTSLDIFAGMIETMKINTEIMEESTQKDFSNATELADYLAKKGVPFREAHEIVGKLV
                     LECTQNGIYLQDVALSHYQEINPLIDDDIYVVLSSKTAVQKRNSYGGTGFDQIKVALE
                     NAKKTL"
     gene            complement(16984..18198)
                     /locus_tag="U0308_001388"
     CDS             complement(16984..18198)
                     /locus_tag="U0308_001388"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEM2316355.1"
                     /translation="MAKEKIVLAYSGGLDTSVAIQWLVESGYEVIACCLDVGEGKNLD
                     FIKEKAITVGASESYTIDAKEEFAEDFALIALQAHAYYEGKYPLISALSRPLIAKKLV
                     EVARQEGASAIAHGCTGKGNDQVRFEVAIHALAPDLKVVSPVRDWKWSREEEINYAKE
                     HNIPVPIDLDNPFSIDQNLWGRSNECGVLENPWTTPPEAAYDLTVSLEDAPDTPDIVE
                     ITFDAGIPISLNGENMSLANLILTLNEIAGKHGVGRIDHIENRLVGIKSREVYECPAA
                     VTLITAHKELEDLTFVREVAHFKPIIEQKISETIYNGLWFSPLTEALVAFLKSTQKFV
                     NGTIRVKLFKGHAIVEGRKSPNSLYDENLATYTSSDTFDQDAAVGFIKLWGLPTKVSA
                     EVNSKVTITTEV"
     gene            18413..19456
                     /locus_tag="U0308_001389"
     CDS             18413..19456
                     /locus_tag="U0308_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2316356.1"
                     /translation="MKNTIKWIAIGFAGIILLPLLIVFFIYKKAVGKKEYNPEVLENL
                     DEASQKFVKNTSPLSDVDSRYKYMRLATKALPSAKDIEIGDVENKKIDGPAGKIPIRI
                     YTPQEDGPFEIIVYYHGGGFVLGGLQTHDAIARKLVQTTGARVVTVDYRLAPENPFPA
                     AVEDAYAALLWVQNHRTSLRAKSSDIIVAGDSVGGNLATVVTQIAKSKGKPNITAQIL
                     LYPATDIFSRDASVLYPSMDEFAEGYVLTKESLDKFFKLYIANASDRKYDPLVAPIRS
                     KDLVGLPKTFIATAEFDPLRDQGEAYAKKLKDAGVEVFAKRFEKVPHGFMTTNSEATD
                     ETYELISEFLEEK"
     gene            19567..20157
                     /locus_tag="U0308_001390"
     CDS             19567..20157
                     /locus_tag="U0308_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2316357.1"
                     /translation="MRKEEIKQAALTLFANNGFEGTSLADIAGVVGLKKQSIYSHFKD
                     KDDLFLSIMKDAKSTEIDYYRAKLRDSDLSRPDLVLSSLLFGVKELYDTDEAYQFWLR
                     YGFYPPKHLYEVVQADITENVLQMEHEFTNLFSNWMEQKLIPMQDVETMKEAYMGILD
                     AVIVDIVYVNDPERTEKKITALWQIFWRGITLKALN"
     gene            20167..21498
                     /gene="fepA"
                     /locus_tag="U0308_001391"
     CDS             20167..21498
                     /gene="fepA"
                     /locus_tag="U0308_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter FepA"
                     /protein_id="HEM2316358.1"
                     /translation="MAKNMEILETDSVKKIYFRYLIPSLVGMLLMSLNIVIDGIFVGH
                     KLGGVALAGINIAVPVFTIFTAISIWIGIGAATQFSFAIGEKNVAKAQTIFTNAILAV
                     VSITVIIGIIAFIFKVPLAYFLGANDDTIGYVLEYMNILLVFGFALTLENILSIFVRN
                     DGDPNLSMIALIVTAISNVILNYLFLFVFEWGVTGSALATMIAIIIGVLILITHFFKK
                     SSRLKFVKVDWNKAFFKKTLAIGLPSFLAEVGVSVFTLGYNISIAAIAGTAGVAAFSV
                     LNYTHSVILMLFLGMGSAIQPLISYYRGAKARQKEIETLKIAIMVAFSTGVGFLLVGL
                     FGSNLLVSMFGNFSPEIKDLASNGIKLFYTAYLFMGFNFVMMTYFQTSDKVKMATWIT
                     ISREIIFMVIFLLVLPPIIGIPGVWLAIPISEMIVAASIIFYMKKKHILFK"
BASE COUNT         7046 a         4062 c         4441 g         6434 t
ORIGIN      
        1 tttgagtcaa cacttaatct aggttataat gataggggta acatataatg gatgacaaaa
       61 tattgataat aaatggaaat agcaacatag aggtgagaaa atggctttaa agataaagtg
      121 gattatagca atcagtatga ttattgtact tttagttgta ggatggtttt tggggactag
      181 gctaacggtg aaaaaatatg aagtgagttc tgctaaaatt gaaaaagaaa ttaaactagt
      241 gcaattatcg gatttgcatt ttagtgaatt tggcgataag aatgaaaatt tgttacataa
      301 agtggcaaat ttaaatccag atgtgattgc aattactgga gatctttttg ataggcaagg
      361 ggatagtgtt cctaaagagc ttattaaaaa gcttacgaag attgcgccgg tttatttttc
      421 gccggggaac catgaatatg atgttaaaaa tgcctatgag gacgattaca agccattttt
      481 agaaaaaatt ggtgtagtta acttagaaga tcaaactgct actatcgacg tgggaggaca
      541 gaaatttcaa atgtctggat tgcggagtag tgcgaattta gattatgact atccttatta
      601 taaagaagga ctagcagaaa taaaaaagca gcaagattca acgtattatc aaattctttt
      661 gtcgcatatg ccggactatt ttgagcttta tgtggagaat ggttttgatt taactttaag
      721 tggtcacacg catggaggga ttgtgcgtat tccgtatacg aatattggtg cgattgctcc
      781 aggaccgcag cgaacacttt tgccggatta tgtatacgga gaacattcaa aagatggaaa
      841 gacaatgata atttcagctg gacttggtgc gggaagcctt catcaaaaag catttccgag
      901 gttaggaaat ccatatgaaa ttgttgcagt gacgataaag ccagcgacga actgaaaaaa
      961 gagccttcat caaggctctt ttttctattt aaagatatga tccaaatttg tatgttcgtc
     1021 tgactcgcaa ttacaggctt tttcaagttc acagccgcca cattttcctt gtttactgcg
     1081 tttgataaat ttaataatcg cgtaaatagt gtagccgaaa attgcgccac caagtaataa
     1141 attaaccatt atactcacga aaaacatcct ctcttaaacg aatagactac caatttgata
     1201 aacgagaaat actaacacgt aggctgtaac aagtggataa gcgacagcaa atgcggtcca
     1261 tttccaagaa ctagtttctt tacgaatggc ggcaactgtc gctaaacatg ggatgtaaag
     1321 caagatgaac aacataaagc aataagccga aagtggtgta tagaaagtgc taacgatgct
     1381 gccaagcgaa ctttctccaa ctgcataaat aattgccatt gtggaaacga ctacttcttt
     1441 tgctagaaaa ccaggtataa gggtggctcc cgcttgccat gttccgaaac caagcggaac
     1501 gagtagtggg gcgagcatgc caccgataat tgctaagaaa ctttcgccca ttggtacgtc
     1561 gagtccagat ggaccagcgt agtttagcaa ccaaatgata accgaacctg cgaaaatgaa
     1621 tgttcccgct ttacgcaaga atccttttcc tttttcccac gtgctgcgcc ataaagtttt
     1681 aagcgatggg aggcggtagg gtggtagttc gacgacgaat acggaattat cttttttaag
     1741 taaagttttt gataaaattt tagtgacgat aagtgccatt aaaataccga taacgtaaag
     1801 tgaaagtact acgagcgcct gatgtttctc gaaaaacacg cctacaaaaa gagcataaac
     1861 aggaagtcgc gcggagcagg acataaatgg tgaaacgaga atagttagtg ttcgttcttt
     1921 ggattcttca atcgagcgcg ccgccataat tccagggaca ttacaaccaa agccgataat
     1981 catcggaata aaagctttcc catttaagcc gaagatttcc attacgcggt ccataacaac
     2041 cgctattcta gccatgtatc cggaatcttc taagacagaa atgaagaaga aaataaccaa
     2101 tatttgagga acaaagacaa gcacgccacc gacaccagcg atgataccat ctgcaaccaa
     2161 atcagtgata aatccagatg cgccaatggc tgttaaaaag gatgttacgg agtccgtcag
     2221 cggcccgcca ataaaaccat cgagcaaatc agatagcggt gcgccaaccc aagtaaaggt
     2281 tatttggaaa atcaaccaca taataccaag aaaaatagga atgccaaaaa acttgtgggt
     2341 gaaaatttta tcgagtttat cggatagtgg aatatccgaa tggcgcgtat attcgaccga
     2401 ggttaaacaa atatcatgaa tgtaattcac acgaacttgg tgaaaatgat tttctagttt
     2461 accgtcaagc gcaatttcaa gttctgtgcg gatatgtttt aattgctcca aagcagggca
     2521 tgtcgctaaa aattcttctg tgacttcatt tttagaaaga aattgaacag caagccagcg
     2581 agattgtttg gcaggaatca tgtctttgat taaagcttgg atttcagtaa tcgctttttc
     2641 cgcgggttcc ccgtatggta aaataagtgg aatcgcggga gctacgtgtt tttctgacaa
     2701 agtagataaa atatcgtctg taccttttcc ggaacgagca actactggca aaattggaat
     2761 gcgcaattgt ttggcaaggt tctggatgtt tagatgaata ccgcgaccgg cagctacatc
     2821 aatcatattc agtcccatca caacaggtgc accaaactca agtagctgaa tggttaaatt
     2881 tagatttcgc tcaatttgcg aggaatcaac aatatttaac atacaatcga atttctcttc
     2941 cagtaaaaat ctagtgacaa ctgtttcatc acgagaaatc ggatttaagt cataaatacc
     3001 gggtaaatca attaattttc cagtttttga gcgcaacgta ccgactttct tttcgacggt
     3061 gactccgctc cagtttccta catattcata agagcctgtt aatgcattaa ataaggaagt
     3121 tttcccggta tttgggtttc cgagtaagca atatgtattt tgactcatct gcgttccacc
     3181 ataatggcgc aagcatcaca ttgtctaatg ctgatatatt gcccttttgt ttcaaaagta
     3241 cagggaccgc caaatagtcc tttttgtttg atacaaatat cacaaccttc atcgcaacca
     3301 agtgcaagta agcgacgttt aagcatggcg ttctcaattt ttaattctga gatgcgaact
     3361 ttttcaccga cagcagtttc atttaattgc ataagctagc aggcctcctt ttatgttatt
     3421 taatgaacat gataatcatt atcaactatg ttcattttat cacgaacaga ccttaatatg
     3481 aagtgttttt ttgaaattgc tgctagaata gcaaaatagt agggtataac agcaaaaaaa
     3541 tttcttaaga gcatagccgt cttttaacta agaagcatgc ctttttacct ctgtattgat
     3601 acacggaaat aagtgctgga gctgttttta atcacttttt ttctgtcaag ttgttctttt
     3661 ttatagtaaa atggtaacta taatatgtat attaatggag gcaattaaca catgagtgat
     3721 ttatttacta caatcaaagg acaagttact gggaaaaacg tgcgcatcgt actacctgaa
     3781 ggaacagatg aacgtattgt tggagcagct gcacgtctgc aaaaagaaaa tatcgtaaaa
     3841 ccaattttgc ttggtaacaa agctgaaatt gaagcaaaag caaaagaaat tggcgtttct
     3901 gttgaaggaa tcgctattca cgaacctgcg accgatccac tttttgatga attagtggct
     3961 gcatttgtag aacgtcgtaa agggaaagca acagaagaag ctgcacgtaa aatgctcgtt
     4021 gatccaaact attttggaac aatgcttgta tacactggaa aagcagaagg tcttgtaagt
     4081 ggcgcggctc actctactgg tgacactgtt cgcccagcac tacaaattat taaaacaaaa
     4141 ccaggcgtaa gtaaagttgc cggcgcaatg attatggttc gcggtgaaga acgctattta
     4201 ttcagtgatg tagctatcaa cattgcacca gttgcagcag acttagcgga aaatgcgatt
     4261 gtaagtgcgg aaacagcaga aatcttcggc attgacccgc gtgttgcaat gttaagtttc
     4321 tctacaaaag gttctgcaaa atccgatgaa acggaaaaag tcgtagaagc aactgctctt
     4381 gcaaaagaaa aagcacctga attaacgctt gatggtgaat tccaatttga cgcagcattt
     4441 gttccaacgg ttgctgagaa aaaagcgcca ggatccgtta ttaaagggga cgcaaatgta
     4501 tttatcttcc caagcctaga agcaggaaac attggttaca aaattgcgca acgtttaggt
     4561 aactttgaag cagttggccc aattttacaa ggcttaaatg caccagttaa tgatttatct
     4621 cgtggttgta atacagatga cgtttataac ttaacgttaa ttacagcagc gcaagcagtg
     4681 aataaataat atgcaaaagc agtagactaa attgtctact gcttttttta taccattttt
     4741 tcgaggaagt aattcatcca gcgattgtcg ttagtaagtt caggatggaa tgcggtaact
     4801 aaaatattag cttgtttagc tgctacgatt cgattttcaa ctgttgctaa cacagctacc
     4861 tcattactcg gttcaattaa gtatggtgcg cggataaata tagcttcaaa cgcaggttca
     4921 ccaaatgctt cgatgtttaa ttcggcttca aaactctctt tctgcctacc aaaaccatta
     4981 cggatcgcgg tagcttcaat caatcctagg ctctcttcgc caccttcaat ttcttttgac
     5041 aaaaggacaa gcccagcaca agttccaaaa atagctttcc cttcacttgc aaatgcgcgg
     5101 ataggttcca ttaaatcata acgcttcata atcttgcgca tcgttgtact ttcaccacca
     5161 ggtaaaacaa gcccgtcaag tccatctaaa tcacttgaat gctttacttt aaaagcaaga
     5221 gcaccggctg attcaatcat ttggatatgt tcatcaactg caccttgaat tgcaaggact
     5281 ccaatttttt tcatattaaa tgctccgatc ttgcattctg tcttctgggt taaggcgaga
     5341 catttcgatt cctttcatcg gggaacctag ctctttggaa agttttccga ttagctcata
     5401 gtcagtatag taagtggtag cttggacaat cgcactggca aatttggcag ggttatctga
     5461 tttgaaaata ccagaaccaa cgaaaacgcc gtctgctcca agttccatca ttaatgcggc
     5521 atctgcggga gtcgcaacac caccagcagc aaaattaacg accggaagtt tgccaagtgt
     5581 tttaatttct ttgattaatt catatggagc accgaagttt ttagcggcaa ccattaactc
     5641 atcatccgtc attcccgcaa tttggcggat ttgaccgttt acttggcgca tgtggcggac
     5701 agcttcaacg atattgcctg ttccgggttc tccttttgta cgaagcatgg cagccccttc
     5761 accaatacgg cggagtgctt caccaatatc acgacaacca cacacgaatg ggacagtgaa
     5821 atctgatttt aataaatgga attcatcatc ggctggtgtt aatacttcac tttcgtcgat
     5881 ataatcaaca cccattgctt caaggacgcg agcttctgta atatgaccaa tacgtgcttt
     5941 cgccattacg gggatagaaa cagcgttcat tacttcttcg acaatacgag gatcggccat
     6001 acgagcgaca ccaccagctg cacgaatatc ggaaggaacc cgttcaagcg ccataacggc
     6061 aacagcgcca gcttcttctg cgatttttgc ttgttcagca ttaactacgt ccataatgac
     6121 gccacctttt tgcatttgcg ccataccacg ttttacacga tctgtaccaa cttttttctc
     6181 catactaata acctccatca aagttaattg aaaatacctg attattatga taagctaaaa
     6241 gccatttcgt aaaaacagcc aattggatgt tgttttctcc atccaattat aaaagaggtg
     6301 tagtagatgt ggaaacttgc tggaaattct aatttaccaa tttatttaca aattgtagat
     6361 ttaatagaaa caaaaattat caacggagaa cttttgccag aagagaagtt gcctccggaa
     6421 agacagttgg cggaaatgtt tggggtgaat cgttcgacgg ttgtgcgggc gctcgatgaa
     6481 cttacagcac gtgcggttat cattcgcaaa caaggtagtg gaacgacagt caatgcggaa
     6541 aaatgggggc tttttgcagg gcagtcaacc aattggcgcc attatttaac gcaagggggc
     6601 tttacaccag cagtccctta tattcggcaa gcgggagtaa tggaacgagc tgattcggat
     6661 caagtgattg atgcagcgag cggggaattg ccacttgaaa tgacgccaaa aatggaaaca
     6721 ccgagtcttt catggcagtc ttttattgca gaagaacaac aggaggatga agcgggatac
     6781 aaaccactgc gtgaaacgat tcaaaaacag atgaaggaag cttatggctt acaaacacga
     6841 cccgaacaaa ttttcattac atcgggtgca caacaagcgc tctttttaat tacgcaatgt
     6901 ttattaaaac cgggtgatgc tgtggcaatt gagtcgcctt cctactttta ttcgctatcg
     6961 ttgtttcagt cagccggttt gcggattttt gcactaccaa tggacgagga tggtgtcatt
     7021 atttctgaat tacgcgattt ataccataaa caccgtgtga aaatggtttt tgttaatcca
     7081 acctttcaaa atccaactgg acttgtaatg agtttggaac ggcgcaaaga actcgtgaaa
     7141 atttgcgctc atttgcaaat accgatagtt gaagatgatc cattttcaga actagccgca
     7201 ctagacagcc aagttccggc accactgaaa caactggaca cagataatgt gttatacatt
     7261 ggctcgctct caaaaattat gggatccact acacgaattg gttggcttat tggtccgaca
     7321 gcagtaattg aacggctcgc gctcgccagg caagagatgg attttggttt aagtattttt
     7381 ccacaagtac tggcaaatag tgttttgaat acgcccggtt acaaggtgca tttacagcaa
     7441 ttgcaccacg tattaaaaca gcgccgagat gatttaatcg aagctttcga agccatttta
     7501 ccgaatgatg tagtatttat taagccaaaa ggtggttttc atttatgggt gaaattacca
     7561 gtcgaatttc gctcgattcg tgattttgat atatttttag cgaatgattt acttgttatg
     7621 ccaggatttt tatttggggt aaaagaagcg gttatccgtg taacttatgc gcggcttgag
     7681 aagacagaag cgagacgtat agctgaaata ataaagcaaa tattaataga aaaaaagtgc
     7741 gaggaagctt gatttaaagc tatcttgcac ttttttcata ttccccaaaa aatccttcta
     7801 atctataata gaaagtaacc cgcgatttta actcatcaca ataaatcttt ctgccaaaag
     7861 cgaagttgtg atgaatcacc atttttatgt aagggttatc atttactatt aatataaggg
     7921 aggggaaagt agatggaaca gaattgtaag gaattaatta cttatctgct cttgaatcga
     7981 caagtgaatc ttagaaatgt ttccaagaat tttaaagtat ccaaagaagc aattagcgca
     8041 cagattacac aaataaacca tctactaaag tcagaaccaa ttttgattga tcatgatatg
     8101 atttttgtta cagatgtatg tagggaagct tgttaccggc ttttaactgc ggaagagcaa
     8161 cagctgtttt cgttttatga ggtaaatatt cgtcgcaaac ttatcatgat taaattacta
     8221 cttcataatc attatatgtc actcggagcg cttgcggact acgtttatgt aagtaaaaac
     8281 accatgctta cagatgttaa aagtatcaaa gagagtctgc atgagtttga aattcagctt
     8341 gattattcga ggagagatgg ctacgctgtt tctggttcag aatttctgat tcgtaattta
     8401 ctagcagaac ttattcgcga agtcgttcag accccatacg ggaaatttgt ccttgatgaa
     8461 aagaagctga ttactgtgag cgaagtgttt ttactaaaaa aacggctcga aaaggttgaa
     8521 agtaagcttc aaattacctt tacagatgag cagatggaag aattgcccta tattctccac
     8581 ggcatcatca aaagatccaa agtaacaaac aagaaatgga catttaaaat tgaaatgtat
     8641 gacatcaaaa atacccgtga gttcccgata atgaaagaaa tgttttgggg gtatgatttt
     8701 ttaagtgaaa acgatttact ttacttatcg ttacaagtcc tcgcttcgaa cttagtcgag
     8761 tcggcgcttc atttctcaga cagtgaagaa atcgcctacg cagtcgacga gttcattcgt
     8821 ttactagaaa tgtattttgc gacggaaatc atgaagaaaa atgaatttaa agaaaaagtg
     8881 attttacatg ttaggccagc aatttaccga acaattttag gatttcaaat caataatcca
     8941 cttaaaaagc agtttattaa agagtacacc ccgacattta acattgtaga aaaagcctcc
     9001 aaaccttttg aaaaattggt tggtcacaag tggtcagaag aggagattgt gtatctttct
     9061 atgatagttc ttgggtggat gtatcaaatt gaagaaacag aacagccgat tttccgcgca
     9121 gttgtccttt gtaaaagtgg tacatccatc tctaaactac tgttagaaaa cttgaaaatg
     9181 atgtttccga atattgattt tcaaggagct tatgcggtgc ggcaattaag tacggtggca
     9241 cgcgatattg attttatttt tacgactgtg cccgttcaaa gcgatgccac catttttgta
     9301 atcccgtcca ttttaagtaa agacagccgc caaatcctta gggaacaagt ggataaagca
     9361 atcgaaatgg acagtcataa aaaaaccaaa gaactgcttg ctatgctaaa agatgaaatt
     9421 cccgaagaaa atattcgatt agtgcaagcc aaaatggaat cctttttcaa caaaaaagag
     9481 caacctatgg agaagaaaga accagaacaa atgcaaatta cggaagagca ggttcacttc
     9541 ttagaaacgc cacttgagtg ggagcaacta gtttcggtgg catttgcacc aatgttagaa
     9601 cgaggaacgg tggatgctag ttacattcat acttgtgaag aaatattcta tcaaaattat
     9661 gagcagatga tgattgggcc gaatatttat ttaccacatg ccaaacccgc aaacggggta
     9721 attgagcaag atattcagtt gatgataatg aaagcggaca caaaaacccc tgaaaatgaa
     9781 gcagtcaaaa tcatgattgc cttagcacca tctgaacaaa acaaacatat accattatta
     9841 ctaaaattga acgaaatttt cttgaagcct gagaaattag cgggaattct cgcttctact
     9901 aacaaaaaga aaatcgttga aatccttgaa agggggtgag cgtcgcgtgg attaccatga
     9961 tttgtttcaa aaagagttaa ccctgataaa ttcaagatac gagaatcagg cagaactttt
    10021 tgaatacacg agcaagatat tagagaaaga gcagtatgta gagccgactt ttagagaagc
    10081 ggtaacaagc cgagaagttg tttttcctac tggtctcgag atgaatggca tcaaaattgc
    10141 aattcctcat acagacacga tttatgtaaa acgtcctttt gtactcgtaa ataaactttc
    10201 tacgccgatt ccttttattc aaatgggaac gacagataag tggattgatg tcgaagtaat
    10261 tttcatgtta ggaatcaaaa atccccaaga tcaagttcca ctgctttcaa gtatcatgga
    10321 gaaatttatg gaagcagact ttgtggaaca aataaaaaca ataaatgata gcaatacttt
    10381 atgtgatttc ctaaaaaaac aatttggaga gtgattacaa tgaaaaaagt tatcgtagca
    10441 tgtggatcag gtgtagcaac aagccaaaca gtagcatcaa aagtagaacg aattttaaaa
    10501 gaaaaagggg ttcgtgcaac tgtagaagca gtagatatta agtctttaga gcaacatatt
    10561 aaaacaagtg atgtatatgt agctattaca aaagcgaaca aagaattcga tattccaaca
    10621 ttgaatggta ttgccttctt aacaggcatg ggcatggacg aagaaacaga aaaattactt
    10681 aacgccttaa aataaaccag ataaaacagg gagcgtgaaa aaatggagtc attacaatca
    10741 gttatacagt ttattttgaa ccttggagct gccgtttttg ttccagcact aatgattatt
    10801 attgggctaa ttgtacgaat gaaagtaaga gatgcagtca gtgcggggat tattctaggg
    10861 gttgctttcc ttggaatgaa catcgttatc ggctttatga ttgaagcttt aacaccagct
    10921 gcacaaggac tagctgagag aacagggatt aatttaagca tcttagatgg aggctggaca
    10981 tcgatggcaa cacttgcttg ggcatggcca tttgccttct tgatgttccc gctacaacta
    11041 ggtattaacg caattatgct cgttatcaat aaaaccaaaa ccttaaacgt cgatttatgg
    11101 aatgtttggg ggaaaatttt aacagccgta cttattatcg gtgtaacaca aaatgtttac
    11161 ttagcattta ttgttgccgg aattcaaatt gttacagaac taattctatg tgatgccaac
    11221 caacgtcaaa ttcaagagtt aaatggaatt ccaggtgtaa ccgtttctca cggtatgatg
    11281 attttctgta ttttcttaat gccgcttgac tggttactga aaaaaattcc agcacttcgt
    11341 aaagacatgg atgccaatgc gttaaaagat aaaattggta tttttgcaga aaaccatgtg
    11401 atgggcttta ttatcggtgg acttctgggg attgcagctg gttatgatgt tgcgaaaacc
    11461 ttgatgttag ccatgcaagc tgcagcagca ttaactcttt tcccgatggt tgcaaaacta
    11521 tttatgcaag ctctttcgcc actatctgat ggtatttctg agttcatgaa acgtaaattt
    11581 aaaaaccgtg aattgtttat tgggctagat tggccgattt tagcaggatg tagtgaagtt
    11641 tgggtagcaa tcgttctgat ggttccagtt acacttatct ttgcgcttat tttaccagga
    11701 aatggcgtat taccgttcgc tgggatttta aatatttctt tatgcgcacc agcacttatc
    11761 gtaacaggtg gaaacttaat tcgtatgatt atccttggaa caattaccac accgattttc
    11821 ttatatgtat ctactttctt cgctggaaca attacggatt tagcgcattc aacaggcgca
    11881 atttcgctaa aagctggaca acaaattaca tggagtacac ttgaatatcc agtgttccgt
    11941 tatatctttg cagaagcaag tcagtttact attttaggct ttatttttgt cgcaatttgg
    12001 gtagtattac tagtattcta tgtgaaaatg atgaaaaaac gaacaattga actagaaaaa
    12061 gctagctctt aagaaatagg agtgatgaga tgatttacac gataacatta aatccagcca
    12121 ttgaccggtt gcttttcatt caaggagagt tagaaaaaag gaagactaat cgagtcaaaa
    12181 aaacggaatt tgattgcggg ggaaaggggc ttcatgtttc gggagtgtta tccaaattcg
    12241 gtattaaaaa tgaagcactt ggaattgcgg gatcggacaa tctcgacaaa ctatatgcca
    12301 ttctaaaaga aaaacatatc aaccatgatt tccttgtaga agctggaact tcgacaagag
    12361 aatgcttcgt cgtcttaagt gatgacacga atggcagcac gatgatacct gaagctggtt
    12421 ttaccgtaag tcagaccaac aaagacaatc ttttaaaaca aatcgctaaa aaagttaaaa
    12481 aagaggatat ggtggtgatt gctggatctc cgcctcctca ttatacatta tctgatttta
    12541 aagaactact aagaactgtc aaagcaacag gagcgtttct cggatgtgat aattctggtg
    12601 aatatttaaa cttagcggtc gaaatgggcg ttgatttcat taaaccaaat gaagatgaag
    12661 tcattgccat tttggatgaa acgaccaatt cactagaaga aaatgtccgc aaattagccg
    12721 gaaaaattcc ctatctagtc gtttcgcttg gagcaaaagg atcactttgc gcgcataatg
    12781 gcaagttgta tcaagttatt ccaccaaaag tgcaggaacg caatgatact ggggctggcg
    12841 atgtgtttgt tggggcattt attgcaggac ttgcgatgaa catgccgatt actgaaacat
    12901 taaaagtcgc gacaggttgt tccgctagta aagtcatgca acaagacagt tcgagctttg
    12961 atttagaagc tgctggaaaa ctcaagaatc aagtaagcat tatacaattg gaggagagat
    13021 aatatgttat accaaaaaga acgtgaagat ttagcaaaaa tagtgaagac gatgtttgac
    13081 cgctttgaaa cgaatgcagc tggaggaaat gtaagtgtgc gcatgaatag tgagcacatt
    13141 attatgacac ctacactcat gagtcaagca aaactttgcg atctttcccc atatgaaatc
    13201 cttgtagtgg ataataacaa tgaagtcgta gaaggggacg gaagagttac tagagaaatt
    13261 aacttacacc gcgcttgtta cgtagaaaat ccaaaaattg gctgtgtact ccatgctcat
    13321 ccaaaagaat cgatgctatt tgccacactt ggaatggaat taccgaattt aacagaagca
    13381 acgcaaaaaa ttggccaaat tccaacactt gaatttgcgc cagcgactag tccagaactt
    13441 gcggaaatcg ttcgtaaaca cgttatcgaa ctaggagata aagctgttcc tagtgcaagt
    13501 ttattaaata aacacggtat tgtcgtatta gatacatcac ttcataaagc atacgacatg
    13561 ctagagcgta ttgaatacaa tgcctatatt gcggaaaaag cgttagtatt tgatgcgtta
    13621 ggtataaaaa aattagctca tgaccgcgaa ttaaattata atttggagga gtaactaatg
    13681 gaaaaattcc tttttaatgc aacgttattt gccagtgctt tattactgat ggtcggtata
    13741 tttaaaagct ctattccaat taccgccatt tctctcgtgt tagcagttgt ttcgcaacat
    13801 ttctttcgaa aaaaatatcc taaacaaact cgtagctatc gcgaaatagt cgcggcaaag
    13861 cagaaaaaag gatgaaaaaa gggatgaaaa tctagttgta gattttcatc cctttttatt
    13921 atagttggga acgttgtgat tttttcggtc ggacgtacaa tccgagtttt tcttgttccc
    13981 tcgttaacga aacgaataac gaaacaatca ttaagataat gacgatagaa aacggaaagg
    14041 ctgctataat cgatgcgttt tgaagagctg tgagtcctcc tgcataaagt agcacacttg
    14101 ctattcctgc ttggagtagg ccccatgtta ctttgacgga gtttggtgga tttaaagatc
    14161 cgcccgtcgt ttgcataccg agaacaaatg tggctgagtc tgctgaagta ataaagaaga
    14221 ctgcaattaa aatcatcgca acaatcgata aaaccatacc agctgggaat tcattaaata
    14281 ccccaaagag tacttgttca gttgctaaac ttgaaagccc agaatttcca tgttgttcga
    14341 caaaaatcgc cgagccgcca aatacggcaa accaaaatac actgactaaa gcgggcaaca
    14401 cgatgacacc gagcaagaat tggcgaatcg ttctgccgcg tgaaattctg gcaataaaaa
    14461 tcccaacgaa cggtgaccaa gaaagccacc aagcccaata aaaaatagtc catgagtcaa
    14521 tccattttcg agcatcaggc gcatcaggtg ctgtctgaaa actcatttgg atgatatttt
    14581 gtaagtagtc accaaatgaa ttggtgaagt tattcataat gaatagggta ggtccaagaa
    14641 taagggttaa aactaataaa actccagcaa cataaatatt tacattactt aaaagctgaa
    14701 tccctttatc aagtccagac atggctgata acataaataa aatggtgaca atgataataa
    14761 tggtaaattg gacagtaaaa ttgtttggaa cgccaaacaa gtatgtaaga ccaccattaa
    14821 tttgttgagc gccaaggccg agtgtcgttg caacaccgat gactgtcgca aaaacagcga
    14881 tgatatcaat caattgtcca attggacctt tggcatgttt ccctaaaata ggataaagag
    14941 tggcacttat taaacccggc gcatttttcc ggaatttgaa gtaagccagt gctaaagcga
    15001 caatcgcata aatcgaccaa gcagaaattc cccagtggaa gaatgaatag cgaagcgcat
    15061 ctttcatcgc tgcttgcgtg ccgacttcac cgccaggagc ttggactgca taatgagata
    15121 acggctcagc tgcaccccag aaaacgaggc caattcccat tccagcacta aacaacatcg
    15181 caaaccaaga cttattacta taccccggtt cctcaccagg ttttccgagg cgaatcgagc
    15241 caatcggact taaaactaaa aacaagcaga agataataat aatcgctaca acaattaaat
    15301 agtaccaacc aaaattactt gttagaaatt tttggatatt ggttgtaaaa gcttcaaatt
    15361 gttttggcaa aaaggctcca aataaaacgg ctaataaaac aagacaaccc gatccccaaa
    15421 aaacacttgt taattttttc aatacatcac ttccctttat attctctgta tctatttccc
    15481 catgttagca aaaaggtaac attcttttta atagtaacaa aaaaagtagt gctctgacaa
    15541 atcatgtaag aggaaaaagg gggagaagtc agcaaaaaac tggaacgcca ttcagcatcc
    15601 cagttagttt tacaatgttt ttttcgcgtt ttcgagagca actttaattt gatcaaatcc
    15661 agtcccgccg taagaatttc ttttttgcac ggcagtttta gaggaaagca ccacgtaaat
    15721 atcatcatca ataagtggat ttatttcctg atagtggcta agcgctacat cttgcaaata
    15781 aatcccattt tgcgtacatt caagcaccaa tttcccaaca atctcatgcg cttctctaaa
    15841 tggaacgcct tttttcgcta aataatctgc tagttccgtc gcattggaaa aatctttttg
    15901 cgtcgattct tccattattt ctgtgttgat cttcatcgtt tcaatcattc ctgcgaaaat
    15961 atctaagctt gtttgaaccg tctcaagcgt atcaaacatg ccttccttat cttcttgcaa
    16021 gtctttattg taagcgagtg ggagaccttt taaaaccgtt agcatgccga acaggtttcc
    16081 gtaaacccgg ccagttttac cgcgaattaa ctcagccata tctggatttt tcttttgcgg
    16141 cataattgaa cttcccgttg aaaaagcatc cgttaactcg acaaattgaa attcatgact
    16201 cgtccaaagt atcaattcct cacaaaaacg cgataaatgc atcattaaaa tagaactgtt
    16261 actaagaaac tcgataataa aatcacgatc actcacgccg tctaaactat tttcatagat
    16321 agcggaaaaa ccaagtaatt cagcgctgta ggctcggtca atcggaaaag tcgtcccagc
    16381 cagcgcagca gaaccgagcg gtgaaatatc aatccgtttg acactttctt ctaaacgctc
    16441 caaatcccgt gtaaacattc caaagtaagc taataaatga tgtgcaaaag agatgggttg
    16501 ggcgtgttgc aagtgtgtat agccaggcat aatcgtttcg acgttcgcct ccgctttttg
    16561 gactagcacc acgcgtaaat gttttaatga ctgaataatt tctgctacgg cttgttttaa
    16621 atacaaatgc atgtctgttg caacttgatc attccgactg cgcgccgtat gaagttttcc
    16681 agcgactggg ccgatttcct cgtgcaatag tttttcgata tttaaatgaa tatcttcgtt
    16741 aactgtgctg aattcgagct caccaagcgc taatttttct tggaggattt ttaatccggc
    16801 cgtaatttca gctgcttctg aagcaggaat aattccgcat ttgctgagca tagcgacatg
    16861 cgctaaactt cccgccaagt cttcttttgc cattttttga tcaaaagaaa tcgaagcacc
    16921 aaaatcgtca atccatgctt cacttttccc ttgaaaacgt ccgccccata gtttttccat
    16981 tttttacacc tcagttgtta ttgtcacttt tgaattaact tctgcgctta ctttcgttgg
    17041 taatccccaa agcttgatga aaccaactgc tgcatcttgg tcgaatgtat cggaagacgt
    17101 gtaagtcgct aggttttcat cataaagcga atttggtgat tttcttcctt ccacaatggc
    17161 atgaccttta aataatttga cgcgaatcgt accgttcacg aatttttgcg tggattttaa
    17221 gaaagcaact aatgcttctg tcaaaggtga gaaccatagg ccattgtaaa ttgtttcgct
    17281 gattttttgt tcgataatag gtttgaaatg tgccacttca cgaacaaaag ttaaatcttc
    17341 taattcttta tgtgcagtaa tcaaagtgac tgcggccgga cattcatata cttcacgtga
    17401 tttaatgcca actaaacgat tttcgatatg atcgattcta ccgacaccat gttttccagc
    17461 aatttcattt aaagtaagga ttaaatttgc taggctcata ttttctccat ttagagaaat
    17521 tggaatacca gcatcaaacg taatttcaac aatatctggt gtatctggtg cgtcttctaa
    17581 actcactgtt aagtcgtaag ctgcttctgg tggtgttgtc catgggtttt caagcacccc
    17641 acattcgtta cttctacccc aaaggttttg gtcaatcgag aaaggattat ctaaatcaat
    17701 tggaacaggg atgttatgtt ctttggcgta attgatttct tcttctctag accatttcca
    17761 atcacggaca ggggaaacaa cttttaaatc aggagcaagt gcatgaatcg ctacttcaaa
    17821 ccgaacttgg tcatttcctt taccagtaca accatgagcg atagcagagg caccttcttg
    17881 acgagctact tctactaatt ttttcgcaat taacggacga cttaaagcgg aaataagcgg
    17941 atattttcct tcataatatg cgtgggcttg aagggcaatt aacgcaaaat cctccgcgaa
    18001 ttcttctttt gcatcaatcg tgtaggattc acttgctcca acagtaatgg ctttttcttt
    18061 aataaaatcc aaatttttgc cttcaccaac atctaagcaa catgcaataa cttcataacc
    18121 tgattctact aaccactgaa ttgccacaga agtatctaac ccacctgagt aagctaatac
    18181 gattttttct ttcgccattg taaacatccc ctattcataa atatacaaac atttgtattt
    18241 atattaacac tgatgctttt atatatcaac ctttttattt tgaattattc ataattatgc
    18301 ttaaaaatac attttcaaat aaaaataatc atttcaaata gtaataaatt ggttcctgtt
    18361 cgtaaaactg ctatacttgt taatgaagtt atattgaagg agttgagcga atgtgaaaaa
    18421 tacaataaaa tggatcgcta tcggttttgc tgggatcatt ctacttccat tattaatcgt
    18481 tttctttatt tacaaaaaag cggttgggaa aaaagaatat aatcccgagg tactggagaa
    18541 tttagatgaa gcttcacaga aatttgtgaa aaacacttca ccgttatccg acgtagattc
    18601 gcgatataaa tatatgagac tagcgacaaa agcattacct tcagcaaaag atatcgaaat
    18661 tggcgatgtt gaaaataaaa aaattgatgg cccggctggc aaaattccaa ttagaattta
    18721 tacgccgcaa gaagacggac cttttgaaat tatcgtttac tatcatggtg gcggatttgt
    18781 tctaggcgga ctgcaaacgc atgacgcgat tgccagaaaa cttgttcaaa caacaggcgc
    18841 tcgcgttgtt actgttgatt accgacttgc tccagaaaat ccattcccag cagcagtgga
    18901 agatgcctat gccgcgctac tatgggttca aaatcatcgt actagcttgc gagctaaatc
    18961 ctcagacatt atcgttgcag gagatagcgt aggaggaaac ttagcaaccg ttgtgactca
    19021 aattgctaaa tcaaaaggta aaccaaatat cactgctcaa attttacttt atccagcgac
    19081 agatattttc agtcgtgatg cgtctgttct ttatccttca atggatgaat ttgcagaagg
    19141 ctacgtgctt acgaaagaat cattagataa attctttaaa ttatatattg cgaatgcaag
    19201 cgatcgtaaa tacgatccac tcgttgcacc aatacgtagc aaagatttag tcggacttcc
    19261 aaaaacattt attgcgactg ctgaatttga tccacttaga gatcaagggg aagcatatgc
    19321 gaagaaatta aaagacgccg gcgtagaagt atttgccaaa cgctttgaaa aagttccaca
    19381 tggcttcatg acaactaact cagaagcgac cgatgagaca tacgaattga ttagcgagtt
    19441 tttagaagaa aaataaatcc atgaatccac tcttttatta gagtggattt ttttgttgac
    19501 aaagaaattt tttcgtgaga gaatgactta cgaacggtcg tcagtttttg cgagaggagt
    19561 ggaatgatga gaaaagaaga aatcaaacaa gctgcactga cactttttgc taataacggt
    19621 tttgaaggaa catcgcttgc tgatattgca ggggttgtgg ggctgaagaa acaatccatc
    19681 tattctcatt ttaaagataa agatgatttg tttttatcca ttatgaagga cgcgaaatca
    19741 acagaaatag attactaccg ggcaaaactt cgggatagtg atttatccag accagatctt
    19801 gttttgtcta gtttactttt tggtgtgaag gaattatacg atacggacga ggcctatcaa
    19861 ttttggttgc gttacgggtt ttatccgccg aagcatttgt atgaagtggt ccaagcagat
    19921 attaccgaga acgtgctaca aatggaacat gaatttacta atttatttag caattggatg
    19981 gagcaaaagt taattccaat gcaagatgtg gaaacgatga aagaagctta tatgggaatt
    20041 ctcgacgcag ttatcgtaga cattgtgtac gtgaacgacc cagaaagaac ggaaaagaaa
    20101 atcacagctt tatggcaaat tttctggaga ggaattacgc taaaagcttt gaattagagg
    20161 tgtagtatgg caaaaaatat ggaaatttta gaaacagatt cagttaaaaa gatttacttt
    20221 agatatttaa ttccttcctt agtgggaatg ttgttaatgt ctttaaatat tgtgattgat
    20281 ggaatttttg ttgggcataa gctcggcgga gtggcgctgg ctgggataaa tatagcggtg
    20341 cctgtattta cgatttttac agcgatttct atttggattg ggattggtgc tgcgactcaa
    20401 ttttcctttg cgatcgggga gaaaaatgtc gcgaaagctc aaacgatttt caccaatgcg
    20461 attctagctg ttgtttcaat cactgttatt attggaatta tagcgtttat ttttaaagta
    20521 ccattagctt attttttagg tgcgaatgat gatacgattg gttatgtgct cgagtatatg
    20581 aatatcctgc tcgtatttgg atttgcgctt acactagaaa atattttaag tatttttgta
    20641 cgtaacgatg gcgatcctaa tttatcgatg attgcgctta ttgtaacagc aatcagtaat
    20701 gttattttga actatttatt cttatttgta ttcgaatggg gcgttacggg ttctgcgctt
    20761 gctacgatga ttgcaatcat tatcggtgta ctcattttaa ttacccattt cttcaaaaaa
    20821 tcaagtcgtt taaaatttgt caaagtggac tggaacaaag cgttttttaa gaaaacttta
    20881 gcaattggct taccgagctt tttagcggaa gttggggtgt ctgtatttac gctaggttat
    20941 aatatttcga ttgcggctat tgctgggact gctggtgtgg cggcgttctc ggtactcaat
    21001 tatacgcaca gtgtgatttt gatgctgttc cttggaatgg ggtccgcgat tcaaccactt
    21061 attagttatt atcggggcgc gaaagctaga caaaaagaaa tagaaacgtt gaaaattgcg
    21121 attatggtag cgttcagcac tggagtaggc tttttgctcg ttggtctctt cggttccaac
    21181 ttgctcgttt cgatgttcgg gaactttagc ccggaaatta aagatttagc aagtaacggt
    21241 atcaaattat tctatacagc ttatctgttc atgggcttca actttgttat gatgacctat
    21301 ttccaaacat cggacaaggt aaaaatggct acatggataa cgatatcgcg tgagattatt
    21361 ttcatggtca tcttcctatt agtgttgcca ccaatcattg gtatcccggg cgtttggcta
    21421 gcaattccaa tttcagaaat gattgtagca gcatccatca tattctatat gaagaaaaaa
    21481 catattctat ttaaataaaa atgagacaaa gatagatgat atcttcgtct ttttaggaaa
    21541 ttaatactaa atatggactt gaaaaaggtg gaagtaagat gaattttcct ttttagagat
    21601 aaattgaatt tgaatggtaa aatgaaaatc tacgtttccg tttttgcgta gacaggtttt
    21661 aaaagggaat gtgtagagaa aatttataga ttcgataagg gatagagtct ataaaacttg
    21721 ttgttttatt aacggagtag tttgcatgtg ggagcaaact aagaagtaat aaaatgtcgg
    21781 tattaggtga aatttaggaa ttcaaaagga aaatttttat ttcacctatg ccggacaaca
    21841 aaaaatccac agcgatgatt atggcaaatt agtgaagctt ttttcaaaat agctatacag
    21901 gagcaaatat aacaaaacgt tttaggtcca agagcaatca tgcttttttt gatctaaaac
    21961 gttttctatg taagggcgaa cgc
//
LOCUS       DASDYK010000037        21916 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.037, whole genome shotgun sequence.
ACCESSION   DASDYK010000037 DASDYK010000000
VERSION     DASDYK010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 21916)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21916)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21916
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.037"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            149..1225
                     /locus_tag="U0308_001392"
     CDS             149..1225
                     /locus_tag="U0308_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316359.1"
                     /translation="MKKAIMAATIFVLLLATLSGCSSPKSDFTAALQKTAENRQYTTN
                     VTFQVNNLSESYIKKLGPEIDLNQLKKSNIQYKISVDSDSASSYSASSIHWKGKKPLD
                     LTIHALQNSDDGKAYIPVSDFYDASDSISSLLPDSAARIFNQVLDQNKDLESKYLNLF
                     ETIQNFSNQTIDTETVDRQAKVLKKMEETAGIAIYSYLNDLDDQHFTSKDNGDIVLKL
                     SKNEISDLVNSVITKLDDNGSVVALIGEIDGSTQKAAKKKWNNAQKSIQSSLKALTEN
                     KAQTLDFKLTLTPDSKKGFSKAIITTNFEDTKTKDLMDFTTTIDMLDYEKVPPMPKGK
                     EIVSKKELDKAISDGLKLYLSSAQ"
     gene            complement(1267..2097)
                     /locus_tag="U0308_001393"
     CDS             complement(1267..2097)
                     /locus_tag="U0308_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEM2316360.1"
                     /translation="MKKVLGFIFTLSLVLVLTACGGSSDKASSSKDDNQLVVGASNTP
                     HAQILEQAKPILKDKGIDLKIVKYTDYVMPNKALEEGDLDANYFQHKPYLELEEKEKG
                     YKFADVGAIHIEPMGIYSKKVKDIKDLKDGAQVLLSNSKSDWPRVIGIFVDNGLLTLK
                     DGVKPQDATFDDIKDNPKNLKFKYDFDPAYLMTAYNNEEGDVVAINSNFVVDQGLNPS
                     KDAIAIESKDSPYANIVVTTEKKKDDKNIKELVKVLHSKEIQDYITKEWDGAVVPVDK
                     "
     gene            complement(2162..2836)
                     /locus_tag="U0308_001394"
     CDS             complement(2162..2836)
                     /locus_tag="U0308_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2316361.1"
                     /translation="MTKLQELFPNVDFQMMWVATQETLYMTLVSLFAVFLLGIVLGLL
                     LFLTNNKKHAGARILYWITAILVNVFRSIPFIILIVLLLPMTKSLVGTVIGPKAALPA
                     LIISAAPFYGRMVEIAFREVDKGVIEAAKSMGANMFTIIGKVLIPEALPAIISGITVT
                     AISLVGFTAMAGVIGAGGLGNTAYLEGFQRGQPDVTVLATIIILIIVFIFQFIGDFLT
                     KRTDKR"
     gene            complement(2833..3855)
                     /locus_tag="U0308_001395"
     CDS             complement(2833..3855)
                     /locus_tag="U0308_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEM2316362.1"
                     /translation="MITLQNVVKEYTSRNNKVLAVDHVDLEIEQGEIFGVVGYSGAGK
                     STLIRMFNGLELPSAGTVEVDNLLISQIRGSKLRKARQQIGMIFQHFNLLWSRTVAEN
                     IAFPLEIAGVRGEKRRFRVNELIRLVGLEGKENAYPSELSGGQKQRVGIARALANNPK
                     VLLCDEATSALDPQTTDEVLELLLDINKRLHLTIIVITHEMHVIRKICNRVAVMENGK
                     VVELGDVLDVFRHPQEKVTQRFVRQVTDSDETEELIHLLLDNYAEGKIVKLLFMSENA
                     TQPVISQVAKENDVMLNVLHGNLTQTQNGAYGTLYVQVLGTEDAINASLTQLRQLKVE
                     TEVLER"
     regulatory      complement(3945..4063)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(4172..4360)
                     /locus_tag="U0308_001396"
     CDS             complement(4172..4360)
                     /locus_tag="U0308_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316363.1"
                     /translation="MKKHIVLIVVACITVIAVFMYIVQINNSELKYQNRAQIKIASQM
                     ASQNEQTDNSIISEITYK"
     gene            complement(4439..5581)
                     /locus_tag="U0308_001397"
     CDS             complement(4439..5581)
                     /locus_tag="U0308_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEM2316364.1"
                     /translation="MKSKLELLFTKISHVMNVWQATFFAAVSWILALITIQTIYLWSI
                     SIRDDSLFLREVSQAIVQLFGTNKYTRIMQSFWMMSLKFLIIFLIACLFFAFFYRLMR
                     QRILKKQLRTINFALNDGKPVDTESFVPEIQELERNIENMRERQKKLMQQEEQAQQAR
                     NDLITNVSHDLRTPLTSILGYLSYIHEDRYRDEIELRYYTELVYGKARHLHKLIDDLF
                     SYTRLDSVDYQLKKDELDIIELLRQLVAEYDGRAAERNMQIVEHFDANKLIIGGDGNQ
                     IMRLFENLFSNALRYGEGNKQIDVSAKKEDNMAVVRVTNYGEEIPNVDLPYLFERFYK
                     VDKNRTTTGTGLGLAIAKSIVEKHGGIVTAESKKRQTSFIVKLPLI"
     gene            complement(5571..6266)
                     /locus_tag="U0308_001398"
     CDS             complement(5571..6266)
                     /locus_tag="U0308_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2316365.1"
                     /translation="MTTSILIADDDKEIVDLVKLYLQNEGYTIYQAYDGAEVWRLVQE
                     KQPTLVILDIMMPEMNGLEVCRLMRDNGILTPILMLSAKAEDNDKIMGLLTGADDYMV
                     KPFNPLELSVRVKAILRRMQQMSQAEPVSQDKVIIGPIVVDRGLHVVTVSGKELHLTT
                     SEFDILFLLASEPGRVFSSEYIFEKIWQEKALGASKTVMVHISNLRDKLREAMGGENV
                     IKTIWGVGYKIEI"
     gene            complement(6341..7216)
                     /locus_tag="U0308_001399"
     CDS             complement(6341..7216)
                     /locus_tag="U0308_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM2316366.1"
                     /translation="MNHSNLTILSVCSNFVIVVLKLIVGFFTGSVAVISEGIHSSMDL
                     FASIITFFSIRISNQPADEDHPYGHGKAENIAGTIETLLIFVAGIWIIVESVNKLVNP
                     HEIRFPALGIMVMLFGAIVNIIVSRIIKKAADEANSVAMKSNALHLYTDVFTSLGIAL
                     SLFLVYITGWLWLDPVIAILTAFYIMYEAYKLLKESFPPLMDKRLSADEEEAIKQIIL
                     AHKARFIEFHDFRSRRAGAEEYIDFHLVVSSSMTIESAHSLCDEIEAEIMNFYAKAEV
                     LIHLEPEEERVLTRI"
     gene            complement(7408..7692)
                     /locus_tag="U0308_001400"
     CDS             complement(7408..7692)
                     /locus_tag="U0308_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEM2316367.1"
                     /translation="MRTAQKNGEDFVVFFFTPMCGSCQIASRLVDVVLESDEVHTEVV
                     KVDLNYVPDIAQNLEITSVPALVKFKNGQPADLSYQLHDATAIFEFLYSE"
     gene            complement(7777..8154)
                     /gene="gcvH"
                     /locus_tag="U0308_001401"
     CDS             complement(7777..8154)
                     /gene="gcvH"
                     /locus_tag="U0308_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEM2316368.1"
                     /translation="MSLPKDLLYTEEHEWVKADEGSYVIGITDFAQDQLGDIVFVELP
                     EVGDTVAKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILK
                     LEEVEEADVKALLSSDDYEKVLD"
     gene            complement(8195..8548)
                     /locus_tag="U0308_001402"
     CDS             complement(8195..8548)
                     /locus_tag="U0308_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase family protein"
                     /protein_id="HEM2316369.1"
                     /translation="MINFYWYPKCSTCKKAKAWLENEHVDFNEVDIKTETPTAEEIQK
                     WHEVSGLPIRRFFNTSGIKYRELGLKDKLDTLSPEEAYKLLASDGMLIKRPLTTNGKE
                     VTLGFKEEEFEATWK"
     gene            complement(8705..9880)
                     /gene="rodA"
                     /locus_tag="U0308_001403"
     CDS             complement(8705..9880)
                     /gene="rodA"
                     /locus_tag="U0308_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HEM2316370.1"
                     /translation="MNQQNKLAGRIDYGIVLSMMLLMIISLVSIYSAQLTNNQYDANF
                     VVKQAMWFVVSTFAIIVVMQLDYDRLTKWAYYFYGLGLFLLVFVLLFGKEVKGAKSWI
                     VIPFLGNIQPSEVVKVILIVVLAKVIWDHNRTYKVHRFSYDAWLLLKIGLFTLMPLIL
                     IMLQPDLGTALVFIAIMSGMILISGITWKIIVPLFGSIAAIGTALIWMVIYHQNWLTS
                     LGFKPYQFERITTWINPENDPQGGGYQVLRAMTAIGSGQISGNGAGYDAIAIPENHND
                     FIFTIVAGDYGFIGASILLAIYFLLIYQIIRVALDVGVPFYSYICTGVVMMLMFHVLE
                     NVGMNIGLLPITGIPLPFISYGGSALLGNMMAVGLVLGIRFNFKKSMFEVKEENHAS"
     gene            complement(9956..11125)
                     /gene="rodA"
                     /locus_tag="U0308_001404"
     CDS             complement(9956..11125)
                     /gene="rodA"
                     /locus_tag="U0308_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HEM2316371.1"
                     /translation="MARNRKKAVRIDYSIIFLMMLLCIIGLVAIYVAGLVNDQYTNNF
                     LLQQSIWIVISTGVVVVIVLFFDYDKLQWAAYYLYGIGNLLLVLVLIVGDERKGSKSW
                     ISIGSLGSLQPSELMKSFLILALAKVIWDHNKKYKLHTVSLDMQLLLKIGIVSILPLG
                     LVALQPDLGTILVFIAIIIGMVFISGVTWKILLPVFSSIALIGGTLIYLVMYNQEFLQ
                     KLGFKPYQFKRITSWLRPEEDPLGDGMQLLRSMQAIGSGQLQGNGIGNQAIAIPENHN
                     DFIFSIIGGNFGFIGGCVLIMLYFLLIYQIIRVALDINIPFYSYICTGVCSMILFHVL
                     ENIGMTIGLLPITGIPLLFVSYGGSSLLGAFMALGLVLSARYNAPEVNLGKENRF"
     gene            complement(11267..12058)
                     /locus_tag="U0308_001405"
     CDS             complement(11267..12058)
                     /locus_tag="U0308_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316372.1"
                     /translation="MKSALELKNVSFSRKRDFEMKNVSASIPEGKITTLIGPNGSGKS
                     TMLRLMMRLLTPDSGEIFLNDKNITEIPSKDLAKKMTMLSQAPEGLVDVMVHDLVAYG
                     RLPHRSWLSTLQEEDEAVIHWAIKVCNLEELAYRPLHSLSGGERQRAWLAMALAQKTP
                     ILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDHVFVCENGQ
                     LVKDGSPTEVFTTELLREVFHITADITEKDGKQHIHPLASTRFEY"
     gene            complement(12055..13065)
                     /locus_tag="U0308_001406"
     CDS             complement(12055..13065)
                     /locus_tag="U0308_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEM2316373.1"
                     /translation="MTTVKAHDPRRKRRRITFIVVIILLILAFFYGLTTGSVKITYSD
                     AWQTLTGGGSDLANQLIWNLRLPRLLIAFLVGAALAIAGCLLQGVMRNPLADPGVIGV
                     SAGGGFVAILMTLAFPALASFVPIGAFLGAFGTAILIYLLAWDRGVSPLRVILSGVAI
                     NAFIGAMTSGVMVLYSNRVQSVISWMTGTLSGKSWYHLDMIWPYMLVGFVLSGFAIRS
                     SNVLLLGDDAAKLLGFSVERHRFFIIMLAAFLSGVAVSVAGLIGFVGLVVPHIFRLII
                     GNDYKYLLPLSALGGALLVGFADTAARSWFGSIELPVGILLAMIGAPFFLFLLQRGRV
                     AS"
     gene            complement(13065..14036)
                     /locus_tag="U0308_001407"
     CDS             complement(13065..14036)
                     /locus_tag="U0308_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM2316374.1"
                     /translation="MKKITILTLSITAALLLASCGNDTATDTNNETTKTENKSQAALT
                     ITDMAGRDVSFDKKPERIIALTNADMNIIYALGGTVVGRQTTDASGVPDGAKKATEVG
                     NTHDLNLEKIASLGADAIVASSEQNLKDVPAMEGVGPKVVLTGANSIDEIKKQTAVLG
                     ELLGKETKAKELEANIDQKVAEVKKKQQGKKVRSLLVLGAPGSNYAALPSSLSGNVLE
                     IAGGENVAKDFKGVENFPQYASMNVEKIVAADPEVIFLMIHGGDEKETEAAFKKEMKQ
                     NEAWNSTSAVKNDHIVVLPAELFGTNPGIKIDQALDYMTDEINKVDN"
     gene            14192..14356
                     /locus_tag="U0308_001408"
     CDS             14192..14356
                     /locus_tag="U0308_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316375.1"
                     /translation="MTDNLFPNLAHENCKETMPPVTTEQFKEAAILEKNRKLEEILNI
                     VDKKKPSIKK"
     gene            14489..15247
                     /locus_tag="U0308_001409"
     CDS             14489..15247
                     /locus_tag="U0308_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HEM2316376.1"
                     /translation="MAILELNFKSVCLAMQTSVTVILPETDALYHGSIPKYKTLYILH
                     GLSNNHTTYVRNTNIERYATEKGLAVVMPAADHSFYSNMVHGRDFFEFVSTELPHVMK
                     NWFPLSDKKEDTFIAGHSMGGYGAFKVALTFPEKFQAAASMSGVMDINYIIKEDCFEN
                     FSTRAITGEMASQTGTENDLFHLLETNLQNQVPLPALFQNCGTEDFLYEDNLRFRDFA
                     LEKNAPLEYREGPGDHDWDFWDKSIKEIIDWLPL"
     gene            complement(15287..16690)
                     /locus_tag="U0308_001410"
     CDS             complement(15287..16690)
                     /locus_tag="U0308_001410"
                     /EC_number="4.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HEM2316377.1"
                     /translation="MLYSEDDKRKQESYRIPLFGSEEESTSIPKYVLKKEPMEPRIAY
                     QLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCV
                     NILADLWNAPKDMSYLGTSTVGSSEACMLGGLAMKFRWRNHAEKRGLDIQAKRPNLII
                     SSGYQVCWEKFCVYWDVDMRVVPMDKEHLSIDVDKVFDLVDEYTIGIVGILGITYTGK
                     FDDIQLLDEKVEAYNEANEHQLVIHVDGASGAMFTPFVNPELPWDFRLKNVVSINTSG
                     HKYGLVYPGVGWILWKDKEYLPKELIFEVSYLGGSMPTMAINFSRSASQIIGQYYNFL
                     RYGFEGYREIHEKTKKTALYLAKSVEKSGYFEIINDGANLPIVCYKMKEGLDVEWTLY
                     DLADQLLMKGWQVPAYPLPADLSDTIIQRFVCRADLGYNVAEEFAVDFADALHNLEHA
                     RVLYHDKERNDSYGFTH"
     gene            16817..17125
                     /locus_tag="U0308_001411"
     CDS             16817..17125
                     /locus_tag="U0308_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SdpI family protein"
                     /protein_id="HEM2316378.1"
                     /translation="MFDLIFPLLLIILGVIYRVNPPKNKESRFSYRTKASLKNEISWQ
                     KAHQSLGIYWIVIGVSLLVLSLVLAFIPMHAFIRSSILLTTSIFAVLLSVILVEKKLQ
                     "
     gene            complement(17186..18040)
                     /locus_tag="U0308_001412"
     CDS             complement(17186..18040)
                     /locus_tag="U0308_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HEM2316379.1"
                     /translation="MIIKKILNNNVVIAEGKSGKESVVMGRGLAFQKKLGDEVEVSKI
                     EKTFVMETHELSEKLSELLSEIPLKHLRVADDVVQYAQETLETDLSDNIYLTLTDHIN
                     FAVSRYNQGINLKNALLWEIKRFYHAEYLVGMKALDFIEQEVGIRLDEDEAGFIALHI
                     VNARQDGQQMHMTVAMTQIVQDILSIVTYHYGMVLDETSLNYTRFITHLQYFAQRLLR
                     KEIVDSGDDFLYEQVQIKYPEAFKCTKKIDAYLINTHHTELTRDERVYLTIHIYRVTE
                     RNTIIKEE"
     gene            18308..18718
                     /locus_tag="U0308_001413"
     CDS             18308..18718
                     /locus_tag="U0308_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2316380.1"
                     /translation="MATRSEQIFINLPVKDLQATVAFFTELGYEFNPQFTDENATQML
                     IGDNIFAMLLKEDFFQTFHKEGIADTTKAREVLITITQDSRQAVDTLVDHALKIGAKP
                     AGETQDYDFMYSRSFLDLDNHLWEIAYLDESALQ"
     gene            complement(18741..19253)
                     /locus_tag="U0308_001414"
     CDS             complement(18741..19253)
                     /locus_tag="U0308_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClbS/DfsB family four-helix bundle protein"
                     /protein_id="HEM2316381.1"
                     /translation="MVRPKNKVELLQQSTEKYQQLNDLINSIPKEKQQLTFPFEDRDK
                     NIRDVVIHLHEWHKMALDWYEVGMGGKKPLMPAEGYTWKTTPELNLVIWQKYQETDLA
                     QARELLDETHNKEMVLIAGHSEEELFTKKYYKWTNTTSLGAIFISSTSSHYDWAIKKI
                     RKFKKAAGIK"
     gene            19377..19718
                     /locus_tag="U0308_001415"
     CDS             19377..19718
                     /locus_tag="U0308_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HEM2316382.1"
                     /translation="MKKIVILIISLLLLVGIGFGVYYFKNANHIGADVSYVKITTDGE
                     KGKNVSFNYSYTMPAYDEAGKETEVTFSADKNLRKGAYLKLYIKEDKGVTSYEEVPEK
                     EVPSKAAEKLK"
     gene            complement(19750..20133)
                     /locus_tag="U0308_001416"
     CDS             complement(19750..20133)
                     /locus_tag="U0308_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="effector binding domain-containing protein"
                     /protein_id="HEM2316383.1"
                     /translation="MILQENIEIFGKKIRVNNDNFSPIAELWGDVMVDKPAGDIFAVY
                     SNYASDYKGDYDLLVGTKDWDEEKSVLIKAGDYLVFSVDNASHKGVEETWQKIWARDS
                     ELKRAYKTDFEWYHTSGEIDIYISI"
     gene            complement(20189..21085)
                     /locus_tag="U0308_001417"
     CDS             complement(20189..21085)
                     /locus_tag="U0308_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HEM2316384.1"
                     /translation="MKLERILAILVMILERKVLASELAEKFEVSTRTIYRDMDTLLYA
                     GFPVVALPGKNGGFTMLDTYKLATFTFSEAEKQILLEALEARSEFMLNDSHEILREKI
                     TLLQTEKPTSKHIFFDSATQHRQQIEAEVKRKVAYIQKAFTTNKQLKITYIAMSGAET
                     TREISPQKLNLMDGSWYLEAYCHKRAAIRHFKLTRITSLKEIGKSIMYVEETEHQPAE
                     MKKIVLEFPKNQLGKLLDYFLQEEMETGDDYVRVSFFYDLERNIISFLLMFGSAVKIL
                     EPASLQKDYKSEVEKLYFNLNC"
     gene            complement(21129..21698)
                     /locus_tag="U0308_001418"
     CDS             complement(21129..21698)
                     /locus_tag="U0308_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEM2316385.1"
                     /translation="MRSLRKIVIILIIIGFMYLLIVAAFMFGGSRTKPSENADTVLIL
                     GAKVNGTPAVPSLVLQERLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVN
                     EGIARKRIETETKSKRTEENIKYSNAKFNLGKTVIVTSDYHMYRALMLAKRQGIDASG
                     LPATSKTFAKYKGMMREVLSITYAWVFDH"
BASE COUNT         6798 a         4782 c         3503 g         6833 t
ORIGIN      
        1 gtgtcatacc aataaatgaa agggattttt catcctaaaa aagggattgt atatcttatt
       61 tatatatggt attgttgtaa cgtaacaaaa ttgcaacata ataacttttt tgtaataaac
      121 gattacttat tgaaggagaa tttaaaatat gaagaaagca ataatggctg cgaccatctt
      181 tgtattgctt ttagccacgt tatccgggtg tagctcccct aaatctgact tcactgccgc
      241 cttgcaaaaa acagctgaaa accgacaata tacaacaaat gtgacattcc aagtaaataa
      301 cctctcagaa agttacataa aaaaacttgg tcctgaaatc gacttaaatc aacttaaaaa
      361 atcgaacatc caatataaaa tttctgttga tagtgattcc gcatcttcct acagcgcatc
      421 ttctattcac tggaaaggaa aaaaaccact tgatttaaca atacatgcac ttcaaaacag
      481 cgatgacgga aaagcttata ttcctgtatc tgatttctac gacgcttctg atagcatctc
      541 cagtttatta ccggattcag cagctagaat tttcaaccag gtactagatc aaaacaaaga
      601 cttggagtcg aagtatttaa acctattcga aacaattcaa aatttttcca atcaaacaat
      661 tgatacagaa actgtagacc gccaagcaaa agtattgaaa aaaatggaag aaactgccgg
      721 cattgcgatt tatagttatc taaacgacct agatgaccaa cacttcactt caaaagataa
      781 tggtgacatc gtcctaaaat tatctaaaaa cgagattagc gatttagtta attccgttat
      841 caccaaactt gatgataacg gaagtgttgt agcacttatt ggagaaattg acggtagcac
      901 tcaaaaagca gcaaagaaaa aatggaacaa tgctcaaaaa agtatccaat catccttaaa
      961 agctctaaca gaaaacaaag cacaaacatt agatttcaaa ttaacattaa ctcctgacag
     1021 caaaaaagga tttagtaaag cgattatcac tactaatttt gaagatacca aaacaaaaga
     1081 cttaatggac ttcacaacaa cgattgatat gctagactac gaaaaagttc ctccaatgcc
     1141 aaaaggaaaa gaaattgtat ccaaaaaaga attagataaa gccatttccg atggactgaa
     1201 attatattta agtagcgctc aataaaaaaa tccttttacc gaaacggtaa aaggattttt
     1261 tctattttat ttatccactg gaacaacagc gccgtcccat tctttcgtaa tgtaatcttg
     1321 aatttctttt gaatgaagta cttttactag ctctttaatg tttttatcat cttttttctt
     1381 ttctgttgtt acaacgatat tcgcataagg agagtcttta ctttcgattg caatagcgtc
     1441 tttagaaggg tttaagcctt gatctacaac aaagttagag ttaatcgcta caacgtcgcc
     1501 ttcttcgtta ttgtaggcag tcatcaagta agctggatca aaatcgtatt tgaatttcaa
     1561 gtttttcgga ttgtctttaa tatcatcaaa agttgcatct tgtggtttca cgccatcttt
     1621 cagcgttaat agtccgttat ccacaaaaat accaataaca cgcggccaat cagattttga
     1681 gttagaaagt aaaacttgcg cgccgtcttt tagatcttta atgtctttaa cttttttaga
     1741 gtagataccc attggttcga tgtgaatcgc gccaacatca gcaaatttgt agcctttttc
     1801 tttttcttct agttcaagat atggtttatg ttggaagtag ttagcatcta aatcgccttc
     1861 ttctagcgct ttattaggca taacgtaatc tgtatattta acaattttca agtcaatccc
     1921 tttatctttc aagattggtt ttgcttgttc taagatttgg gcatgtggtg tattggacgc
     1981 acccactacc aattggttat cgtctttact agatgaagct ttatctgagg agccaccgca
     2041 agctgtaagt actaaaacta aacttaatgt gaaaatgaaa ccaagaacct ttttcatgaa
     2101 attctctcct tttttgcggg gattccgcgt ttttttatat aaatttcttc atatacattg
     2161 gttagcgttt gtcggttcgt tttgttaaga agtcgccgat aaactggaaa ataaagacga
     2221 taattaagat aataattgtc gcaagtactg ttacatcagg ttgtccacgt tggaaccctt
     2281 caagataggc agtattccca agaccgcctg cgccaatgac accagccatc gcggtaaaac
     2341 caacgagcga aattgctgtc actgtgatac cggaaataat cgctggtaag gcttctggga
     2401 tgagcacttt accaataatg gtaaacatgt tcgcgcccat agatttggct gcttcaataa
     2461 ctcctttgtc cacttcacga aaggcaattt ctaccatccg accataaaac ggagcagcag
     2521 agataatcaa agctggaagt gccgctttcg gcccaattac agttccgaca agcgattttg
     2581 tcatcggtaa tagtaataca attaaaataa taaaaggaat cgagcggaac acattgacta
     2641 aaatggctgt aatccagtaa agaatgcgcg ctccggcatg ttttttattg ttagttaaaa
     2701 atagtaataa tcctaacaca atcccgagta aaaaaaccgc aaataatgaa acaagcgtca
     2761 tgtataatgt ttcttgtgtt gcgacccaca tcatttgaaa atcaacattt ggaaataatt
     2821 cttgtaattt cgtcatcgtt ctaacacttc cgtttctact ttaagttgac gtagctgtgt
     2881 tagactcgca tttatcgcat cttctgtacc taaaacttgt acataaagcg ttccgtatgc
     2941 gccattttgc gtttgcgtta agttcccgtg gagaacattt agcataacat cattttcttt
     3001 tgctacttga gaaatgactg gttgagttgc attttcgctc ataaagagta atttaacaat
     3061 ttttccttct gcataattat cgagtaatag atggattaat tcttctgttt cgtctgaatc
     3121 ggtaacttgg cggacgaagc gctgcgttac tttttcttgt gggtgacgga aaacatctaa
     3181 aacatcgccg agttcaacaa cttttccgtt ttccattact gcgacgcgat tacatatttt
     3241 ccggataacg tgcatttcat gggtgataac gatgatagtt aaatggaggc gtttgttaat
     3301 atctaggagg agttctaaaa cttcatcggt agtttgtgga tctagtgcgg aagttgcttc
     3361 atcacaaagc aatacttttg ggttgttcgc cagcgctctt gcgataccga cacgctgctt
     3421 ttgaccgccg cttagctcag atggataggc attttctttt ccttccaagc caacaaggcg
     3481 gatgagttca tttactcgaa agcgtctttt ttcaccgcga acacctgcaa tttctaatgg
     3541 aaacgcaata ttttctgcca cagtgcggga ccataataaa ttaaaatgtt gaaaaatcat
     3601 tccaatttgc tgacgagctt ttctgagttt actgccacga atctggctaa tgagtagatt
     3661 atctacttca accgttccag cacttggtag ttccagtccg ttaaacatcc ggattagcgt
     3721 acttttacca gctccagaat atccaactac tccaaaaatc tcgccttgtt caatttctaa
     3781 atcgacatga tcgactgcga gaactttatt gtttctggac gtgtattctt ttacaacgtt
     3841 ttgtaacgta atcatctcta tcaccttttc tacattctga tatacaaaaa agcctttctg
     3901 ctgatgagca gaaaggcagc attttttcaa atggactaac ttccttctca tctttcagaa
     3961 caattagttg ttctgcatga cttagcacct taaacacata atgaattatt gtttaggttg
     4021 ctgggtttca cagggcattt ccctccacca ctctggataa gatttctaca tattattaaa
     4081 tcacttcatt tgtgactata gtgacgtttc ttgttttttc atattacctt gtctagtaga
     4141 ctttgtcaat aactttctca cttatgttaa tttatttgta agttatttca ctaataatac
     4201 tattatctgt ctgttcattc tgactagcca tttgagaggc tattttaatt tgggccctat
     4261 tttgatattt gagttcgcta ttattaattt gaactatgta cataaatacc gcaataaccg
     4321 taatacaagc aacaacaatt aaaacaatat gttttttcat tctcctctcc tccgtgattt
     4381 atattctaca gaaagaacat aaatcacgcg gaaagaaact tttaagaatt gttaaagatt
     4441 aaattagtgg cagtttaacg ataaaactgg tttggcgttt tttgctttcg gcagtaacaa
     4501 ttccgccatg tttttcaacg atagatttag caatcgcaag gcctaatccg gttccagtcg
     4561 tcgtccgatt tttatctact ttgtaaaagc gctcgaacaa gtaaggtaaa tcgacattag
     4621 gaatttcttc accataattc gttacgcgca caacagccat attatcttct ttcttagcac
     4681 taacatcaat ttgtttgttg ccttctccgt atctaagggc attcgaaaat aaattctcaa
     4741 ataagcgcat gatttggttg ccatcaccgc caataattag tttgttagca tcaaaatgtt
     4801 cgacaatctg catatttcgt tctgcagctc gcccgtcgta ctccgccact aattgccgta
     4861 gcaactcaat aatgtctaac tcatctttct ttagttggta atccacgcta tcgagccttg
     4921 tataagaaaa caaatcatca ataagtttgt gcaaatgacg cgctttcccg tacacaagct
     4981 cggtgtaata acgcagctca atttcatcgc gataacggtc ttcatgtata taacttaaat
     5041 agcctaaaat ggatgtaagt ggtgttcgca aatcatgcga aacattcgta atcaaatcat
     5101 ttctggcttg ctgggcctgt tcttcctgct gcattaattt tttctgccgt tcccgcatat
     5161 tttcgatgtt acgttccagt tcttgaattt ccggcacaaa actttctgtg tcaactggct
     5221 tcccgtcgtt aagcgcaaaa ttaatcgtac gcagttgttt tttcaaaatt ctttgacgca
     5281 tcaaacgata gaaaaaagca aagaatagac aagctattaa aaagataatc agaaatttta
     5341 gcgacatcat ccaaaaagat tgcatgattc gcgtatattt attcgttcca aataattgaa
     5401 caatagcttg tgacacttcc cgtaaaaaca aagaatcatc ccgaatggaa atgctccata
     5461 aataaatagt ttggatggta atcaacgcca aaatccaaga aacagctgca aaaaaagtcg
     5521 cctgccaaac attcatcaca tggctaattt tcgtaaacaa cagttccagt ttagatttca
     5581 attttgtacc ctactcccca aatagtctta atcacatttt ctccacccat agcctcgcgt
     5641 aacttatcac gcaaattact aatatggacc attactgtct tactcgctcc aagggccttt
     5701 tcttgccaaa tcttctcaaa aatatattct gaactaaaaa cgcgccctgg ctcactcgct
     5761 agtaaaaata gaatatcaaa ctcagaagtc gtcaaatgaa gttctttgcc actaacagtt
     5821 acaacgtgaa ggccacggtc aactactatc ggcccaatga tgactttatc ttgactaaca
     5881 ggctctgcct ggctcatttg ctgcattctt cttagaatag ctttcacgcg tacagaaagc
     5941 tctaatggat tgaatggctt gaccatataa tcgtccgcac ctgttaaaag acccatgatt
     6001 ttgtcgttgt cttcagcctt ggcactaagc attaggatgg gagtcaaaat cccattatct
     6061 ctcattaatc ggcatacttc taagccgttc atttcaggca tcataatatc tagtatcact
     6121 aaagttggct gtttttcttg aactaaacgc catacttccg caccatcata agcttgataa
     6181 atcgtatatc cttcattttg taaatataat tttactaaat caacaatttc tttgtcatca
     6241 tcagcaatta aaatagaagt tgtcatactc attgtccttt ccagtcttat ttctacctat
     6301 tgtaacactt tagcaacaaa tcgaatagaa agagctcgga ttaaattctg gtaagaaccc
     6361 gttcttcttc cggctctaag tggataagga cttccgcttt agcataaaaa ttcataatct
     6421 ctgcctcaat ttcgtcacat agcgaatgag cactttcaat cgtcatcgat gaagatacaa
     6481 ctaaatgaaa atcaatatac tcttctgctc ctgcccgtct cgagcgaaaa tcatgaaatt
     6541 caataaatct tgctttatga gccaaaataa tttgcttgat agcctcttct tcatccgcag
     6601 acaagcgttt gtccattaat ggagggaaag actcttttaa caatttataa gcctcataca
     6661 tgatataaaa cgccgttaaa atcgcgatga caggatctaa ccaaagccag ccggttatgt
     6721 atacaaggaa caaactaagc gcaatcccaa gcgatgtgaa cacgtctgta tataaatgta
     6781 atgcattgga tttcatcgct actgaattag cttcatcagc cgcttttttg atgatacgag
     6841 acacgataat attcacgata gcgccaaaaa gcattaccat aataccaagc gccggaaaac
     6901 gaatttcgtg aggatttaca agtttattaa ctgattccac aatgatccaa atccccgcta
     6961 caaaaataag taaagtttca atggttcccg caatattctc tgcttttcca tgtccatatg
     7021 gatggtcttc atcggccggt tgattagaaa tccgaatcga gaagaaagtg atgattgacg
     7081 caaataagtc catggacgag tgaatccctt ccgatatcac tgccacagaa cctgtaaaaa
     7141 agccgacaat caatttaagt acaacaataa caaaattact acacacagat aaaatagtaa
     7201 gattagaatg gttcataaaa aagcctccga tattttatgt ttcactaaaa atttctcttt
     7261 ataaaacact aatttaacaa ctcgaattat cttaccacaa gcagccaaat tgtgtctata
     7321 gcaacgtttt tagttaaata cagttctata tcgggagcga aacttttttg ctccagggca
     7381 aaatttaaca cagaaaaaat ccctgtatta ctcactatac aggaattcaa aaatggccgt
     7441 tgcatcatgt aattggtagc ttaaatcggc cggttgaccg ttcttaaatt taactagcgc
     7501 cgggactgat gtaatttcaa gattttgcgc aatatcaggc acataattta aatctacttt
     7561 cacaacttct gtatgaacct cgtccgattc taaaaccaca tccacaaggc ggcttgctat
     7621 ttgacagcta ccacacattg gagtaaaaaa gaaaacaacg aagtcctcac cgtttttttg
     7681 cgccgtccgc aaacgttctt tttcccaaat ttccaggaaa aacgcctcct atcaaaaaag
     7741 accagcttcg gttatcccaa gccggcctcc taaaaattaa tctaatactt tttcgtaatc
     7801 gtcacttgat aaaagagcct ttacatccgc ttcttctact tcttcaagtt ttaaaatcca
     7861 gcctgtatcg tatggattgc tattaattaa ttctggttca tcttctaatg tttcgttaac
     7921 agcaactact ttaccagtta ctggtgcata aaaatcagat actgttttta cagactcaat
     7981 gctaccaata gagtcgcctt tagctacagt gtcgccaacc tctggcaatt caacaaatac
     8041 gatatcccct aattgatctt gagcaaagtc cgtaatccca ataacataac taccctcgtc
     8101 tgctttcacc cattcatgtt cttctgtgta caataagtct tttggtaaac tcattttcaa
     8161 aactcctcct ttttcgtgca attatctata ttgactattt ccaagttgct tcaaattctt
     8221 cttctttgaa accaagcgtc acttctttgc cgttcgtagt tagtgggcgt ttgattaaca
     8281 taccgtctga tgcaagtaac ttataagctt cttccggcga aagtgtatct aatttatctt
     8341 tcagtccaag ttcgcggtat ttaataccac ttgtgttaaa gaaacggcgg attggaagcc
     8401 cgcttacttc atgccatttt tgtatttctt ccgcagttgg cgtttctgtc ttaatatcta
     8461 cttcattaaa atcaacatgc tcattttcaa gccatgcttt tgctttctta caggtgctac
     8521 attttggata ccaataaaaa ttaatcattt tgcctctccc tccgattgca ttctactact
     8581 atcatagtgc attttttccg aaagtacaaa tggcaacact tagaaaaaaa cagagcattt
     8641 gaaagcgtat tcattcttgg ttttaaaaat acaaaagcca ttttcgactt ctgtattttc
     8701 ttttttaaga cgcgtgattt tcttctttca cttcaaacat cgatttttta aagttaaacc
     8761 ttatcccgag caccaggcca acagccatca tgttcccgag caaggcgcta ccaccgtaac
     8821 taataaacgg aagcgggata cctgtaattg gcagcaaacc aatattcata ccaacatttt
     8881 ccagtacgtg gaacattaac atcattacaa cccccgtaca aatgtaagag taaaacggta
     8941 cgccaacatc cagcgccaca cgaataattt gataaattaa taagaaataa attgctaata
     9001 aaatactagc tccaataaag ccataatctc cggctacaat cgtaaaaata aagtcattgt
     9061 gattttctgg aattgcaatg gcatcatatc ccgcaccgtt cccagaaatc tgaccagaac
     9121 caattgccgt catcgctcgc agcacttgat aacccccgcc ttgaggatca ttctccggat
     9181 taatccacgt cgtaatccgc tcaaattgat agggtttgaa gcctagactc gtcagccaat
     9241 tttggtgata aataaccatc caaataagcg ccgtcccaat tgccgcaatc gaaccaaaaa
     9301 gtggcacgat aattttccat gtaattccgg aaataagaat cattcccgac ataatagcga
     9361 taaatacaag cgcggtccct aaatcgggtt gcagcatgat aagaataagc ggcattaatg
     9421 taaataagcc aatctttaaa agtaaccaag catcataact aaagcggtgg accttataag
     9481 ttcggttatg atcccaaatc acttttgcta aaacgacaat taagataacc ttaacaacct
     9541 cagatggctg aatgttccct aagaacggga taacaatcca gctctttgct ccttttactt
     9601 ctttcccaaa aagcaataca aatacgagta aaaatagacc tagtccgtaa aagtagtaag
     9661 cccatttcgt cagacgatca taatctagtt gcatcacgac aataattgca aatgtcgaca
     9721 ctacaaacca catggcttgt ttgaccacaa agtttgcatc atattgatta tttgttaatt
     9781 gcgcactata aatggacacc aaactgatta tcatgagtaa catcatagat aggacaatcc
     9841 cgtaatcaat gcgtccagct agtttatttt gttgattcat tatttaatta ctccttactg
     9901 gttggtttgt ataaacaaaa cgaacgcttt ctcccaaaca gtttaaaaaa gaaaatcaga
     9961 aacgattttc tttccctaag ttaacttctg gagcattgta tctcgccgat aacacgagcc
    10021 caagtgccat aaatgcacca agaagtgagc ttcccccata actgacaaaa agtagcggaa
    10081 taccggtaat tggaagaaga ccaattgtca tcccgatatt ttctaaaaca tggaacaaaa
    10141 tcatcgagca aacacccgta caaatatacg aataaaaagg aatattaata tctaatgcca
    10201 ctcgaattat ttggtaaatc agtaaaaagt ataacataat aagtacacag ccaccaatga
    10261 aaccaaaatt cccaccaata atggagaaaa taaaatcatt atggttttcc gggatcgcaa
    10321 tggcttgatt accgattcca ttcccttgta actgcccaga accaatcgct tgcatcgacc
    10381 gaagtagctg cattccgtca ccaagtggat cctcttccgg ccttaaccaa gaagtaatcc
    10441 gtttaaattg gtaaggttta aatcctagtt tttgtaagaa ctcttgatta tacataacta
    10501 agtagattaa tgtcccacca atgagcgcaa tcgaactaaa aactggtaat aaaattttcc
    10561 aagtaacacc actaataaat accataccga taataatagc aataaatact agaatcgtcc
    10621 caaggtctgg ttgaagtgct acaagaccaa gcggaagaat agaaacaata cctattttta
    10681 acagtaactg catatctaag ctcacggtat gtaatttata ttttttatta tggtcccaaa
    10741 tgacttttgc aagtgctaaa atcaaaaaac ttttcattaa ttccgatggt tgcaagctcc
    10801 caagcgatcc gatactaatc cagctcttgg atccttttcg ctcgtcacca acgataagta
    10861 cgagtacaag caataagttt cctatcccat aaagataata cgccgcccat tgcaacttat
    10921 catagtcgaa aaaaagtaca ataacaacaa cgaccccagt agaaataaca atccaaatag
    10981 actgttgcaa taagaaatta tttgtatatt ggtcgttaac aagccccgcg acataaatcg
    11041 ctactagacc aataatacac agcaacatca ttaaaaatat aatcgaataa tctattcgaa
    11101 ctgccttttt tctatttctg gccattattt tccgtccttt tgtgtttgaa tttaaatgta
    11161 aaaaagctgc tattcttaaa aagagcaaca gccttcatct attataataa agtttacctt
    11221 ggataggaag ctttttcacc aaattctaat cttctttctg ttttctttaa tattcaaaac
    11281 gagtcgaagc aagtggatga atatgctgct ttccgtcttt ttcggtaata tccgccgtaa
    11341 tatgaaaaac ctcgcgaaga agctctgtcg tgaaaacttc tgtaggcgag ccatctttga
    11401 ctaattgtcc attttcgcat acaaaaacat ggtcactgta aattgctgcc tgatttaaat
    11461 catgtaaaac gagcacgata gttaaattat attctttatt taaatgcacg agtaaatcta
    11521 aaagctccag ttgatgcgca atatctaaat aagtcgtggg ctcatctagt aataaaatcg
    11581 gtgttttttg tgcaagagcc atggcgagcc aagcgcgttg tcgttctccg cctgataacg
    11641 aatgtagcgg gcgataagcc aattcttcta agttgcacac tttaatagcc cagtgaatga
    11701 ccgcctcgtc ctcctcttgc aaagtggaga gccagcttcg gtgcggcaaa cggccatacg
    11761 ccactaaatc atgcaccatc acatctacca aaccttctgg agcttgtgat aacatcgtca
    11821 tttttttcgc taaatcttta gatgggattt cagtaatgtt tttatcattt aagaaaatct
    11881 ccccgctatc cggtgtcaaa aggcgcatca tcaaacgcag catagtcgat tttcccgagc
    11941 cgtttggacc gataagcgta gtgattttcc cttctggaat actcgcgctc acgtttttca
    12001 tttcgaaatc tcttttacgt gagaaagaaa cattttttag ttctaatgct gatttcatga
    12061 agcaaccctc cctctttgaa gtaagaataa gaagaatggt gcgcctatca ttgcaagcag
    12121 gattccaaca ggaagctcga tggatccgaa ccaacttcta gctgctgtat cagcaaagcc
    12181 aactaataaa gccccgccga gtgcggatag tggcagtaag tatttatagt catttccaat
    12241 gatcaaacgg aaaatatgtg gcacaacaag tccaacaaag ccaataagtc cagctacact
    12301 aaccgcaacc ccactgagaa aggccgccaa cattataata aaaaagcgat gccgttccac
    12361 agaaaagcca agtaatttcg ccgcatcatc cccaagtagc aatacattag aagaacgaat
    12421 cgcaaaacca cttaaaacaa acccgaccag catatacggc caaatcatat ccaaatgata
    12481 ccaacttttt ccggaaagtg tccctgtcat ccaagaaata acactttgaa cccggttgct
    12541 ataaagcacc attacgccag acgtcatcgc accaataaac gcattaatcg ccaccccaga
    12601 caaaattaca cgtaaaggag aaacaccgcg atcccatgca agcaaataaa tcaaaatagc
    12661 tgttccaaac gcccctaaaa acgcaccaat cggcacaaag gaagctaacg caggaaatgc
    12721 taatgtcatt aaaatggcca cgaagccacc accggctgaa accccaatta cgcctgggtc
    12781 agctaatgga ttccgcatca cgccttgcag caagcatcca gcaatcgcca gcgctgctcc
    12841 tactaagaaa gcaattaata accgcggcaa gcgcaagttc caaatcaatt ggttcgctag
    12901 gtcacttccc ccgccagtta gcgtctgcca agcatcacta tatgtaattt tcacggaccc
    12961 cgttgtcagt ccgtagaaaa aagctaaaat aagtaaaatg attactacaa taaaagttat
    13021 ccgtctacgt tttcgccgcg gatcatgcgc cttcacagtt gtcattagtt atccacctta
    13081 tttatctcat ctgtcatata atccaatgct tgatcaatct taattccagg atttgttccg
    13141 aatagctctg caggaagtac gacaatatga tcatttttaa cggcgcttgt tgaattccaa
    13201 gcttcatttt gtttcatttc tttcttgaat gctgcttctg tttctttttc gtccccaccg
    13261 tgaatcatta agaaaatcac ttccgggtca gcagcaacaa tcttttctac gttcatcgaa
    13321 gcgtattgtg ggaagttttc aacgccttta aaatctttcg ctacattttc tccaccagca
    13381 atttctaaaa catttccact taatgaggat ggtagcgccg cgtaattact gccaggagcc
    13441 cctagaacaa gtaatgagcg cactttttta ccttgttgct tcttcttcac ttccgccact
    13501 ttttggtcaa tattcgcttc taactctttg gcttttgtct ctttgcctaa aagctcgcca
    13561 agcacggctg tttgtttttt aatttcgtca attgagttgg ctccggtcaa cacgactttc
    13621 ggtccgacgc cttccatcgc aggaacatct tttaagtttt gttctgaact tgcgacaata
    13681 gcatcagcac caagagaggc aattttttct aaattcaaat catgggtatt gcccacttct
    13741 gtagctttct tcgcaccatc tggaacacca ctcgcgtctg ttgtttggcg acctaccacc
    13801 gttccaccaa gtgcatagat aatattcata tccgcattcg tcagtgcgat aatccgttct
    13861 ggttttttat caaaagaaac atcacgccca gccatatctg ttatcgttag agccgcttgc
    13921 gatttatttt ccgttttagt tgtttcatta ttcgtatcag ttgccgtatc atttccacac
    13981 gatgcaagga gtagtgcggc tgttatactt aacgtcaata tagttatttt cttcataatt
    14041 cccctccaca acactgtcct tttcatttta ctaaattata acacgatatt caaaaagacg
    14101 aacccctaat tgagaattat tttcatttat gttcaaatag tcgatatttc tcagccgata
    14161 ctttataatt aacttaagga ggcgatgaaa aatgaccgat aatctttttc ctaatctagc
    14221 gcatgaaaat tgcaaagaaa cgatgccccc agtcacaaca gaacaattca aagaagcagc
    14281 cattctcgaa aagaatcgca aactcgaaga aatcttaaac atcgttgata aaaagaaacc
    14341 aagtattaaa aaataacgag gacctgttcg cgcaggttct ttattttaca tttaattccg
    14401 agttaactca taagataagt tatatttatt ttatttcgct caaaaatcat gtatactaga
    14461 aaaaaagaca cgtcaggagg cccctacatt ggctatttta gaacttaatt tcaaatcagt
    14521 ttgtttagct atgcaaacaa gtgtaacggt gattttgccc gaaacagatg cactttatca
    14581 tggctcaatt ccgaaatata aaacattata tattcttcac ggtttgtcga ataaccacac
    14641 tacttatgta cgcaatacaa atatcgaacg ctatgccact gaaaaagggc tcgctgttgt
    14701 catgcccgca gcagatcata gcttttattc taacatggtt catggtcgcg acttttttga
    14761 gtttgttagt acggaactgc cgcacgttat gaaaaactgg ttcccacttt cagataaaaa
    14821 agaagatact tttatagctg gtcattccat gggaggttac ggtgcgttca aggttgcact
    14881 tacttttcca gaaaaattcc aagccgcggc cagtatgtcc ggcgtcatgg atattaatta
    14941 tatcattaaa gaagactgct tcgaaaattt cagcacgcgt gccatcacgg gtgaaatggc
    15001 tagccaaact ggtacggaaa atgatttatt tcatttatta gaaactaatc tccaaaacca
    15061 agtgccatta ccagcccttt tccaaaattg tggcacggaa gattttctat atgaagataa
    15121 tcttcgtttc cgagattttg cgcttgagaa aaatgctccg ctagagtatc gcgaaggccc
    15181 cggtgaccat gattgggatt tttgggataa gagtatcaaa gaaattatcg actggcttcc
    15241 actttaataa aaagaagact cggactcacc atccaagtct tcttttttag tgcgtaaatc
    15301 cgtatgagtc gttgcgttct ttgtcatgat acagcactct agcatgttcc agattatgaa
    15361 gcgcgtctgc aaaatcaacc gcaaactctt cagccacgtt atagcctaag tccgcccgac
    15421 aaacaaaccg ttgaataatc gtatcactta aatcggccgg aagtggatag gctggaactt
    15481 gccatccttt cattaaaagc tgatcagcca agtcatatag cgtccactct acatccagtc
    15541 cttctttcat tttgtaacaa acaatcggta aattagcgcc atcattaata atttcaaagt
    15601 agccactttt ttctacactt tttgccaagt aaagggctgt tttctttgtt ttttcatgaa
    15661 tttctcggta accttcaaaa ccatatcgta aaaaattata atattgacca ataatttgac
    15721 tggcactacg agagaagtta atcgccatcg tcggcatcga accacctaag tagctgactt
    15781 caaatataag ctcttttggt aaatattctt tgtctttcca taaaatccaa ccaacgccag
    15841 gataaaccaa tccgtattta tgaccggaag tatttataga aacaacattt ttaaggcgga
    15901 aatcccaagg taattccgga tttacaaatg gtgtaaacat cgcgccactt gctccgtcaa
    15961 catgaatgac taattgatgc tcgttcgctt cattatatgc ttctactttt tcatctaata
    16021 attgaatatc atcaaattta ccagtataag taatgcctaa aatcccgaca atcccaattg
    16081 tgtattcatc aaccaaatca aacactttat ctacatcgat actgagatgc tctttatcca
    16141 ttggcacaac acgcatatct acatcccagt acacacagaa tttttcccaa catacttggt
    16201 agcctgatga aataattaag ttcggtcgtt tcgcttgaat atctagacct cgtttttccg
    16261 catggttacg ccagcgaaat ttcattgcca aaccgccaag catacacgct tccgaagagc
    16321 ctactgtcga agtccccaag taagacatat cttttggagc attccacaaa tcggctaaaa
    16381 tattgacgca gcgattttcc agttcagctg tttgcggata ttcggattta tcaattgcat
    16441 ttttctcgag cgtttctgcc atcagtattt ctgcctcttt ttccatgtat gtctgacaaa
    16501 aagttgctaa gttttgccgc gcatttccct catccatcaa ctggtctttc actagttggt
    16561 acgcaatacg tggttccatc ggttcctttt ttaatacata tttcgggata ctcgtgcttt
    16621 cttcctcaga tccaaagagt gggattcgat aactttcctg ttttcgcttg tcgtcttcac
    16681 tataaagcat cttttttcct cctttaaaat aactgatcac cttctctcac caatacccat
    16741 taaaccttag agacaaaccg ttcaattttt cacaataatt tgttatacta cgatggtact
    16801 tataaggagg ttcgttatgt ttgatttaat ctttccactt ttacttatta ttctcggtgt
    16861 catctaccgg gtgaatccac ctaaaaataa agaaagtcgc tttagttatc gaacgaaagc
    16921 atctttaaaa aatgaaatct cttggcaaaa agcgcatcaa tctctaggaa tctactggat
    16981 agttatcggg gtttctcttc tagttttgtc acttgtactt gcttttatcc cgatgcatgc
    17041 ctttattcgt agctcgattt tattaacaac aagtattttt gccgtattac tttctgtcat
    17101 tttagtagaa aaaaaactac aataaaaaag caccgcgcta agcagtactt ttctgtaatc
    17161 cattacatat aagtccaaaa aaattttact cttcttttat aattgtattt cgttcggtga
    17221 cacgataaat atgaatagta aggtagacac gctcgtctct cgttagttct gtatgatgcg
    17281 tatttattaa ataggcatca atttttttcg tacatttaaa agcttctgga tatttaattt
    17341 gcacttgttc atataaaaag tcatcgccgg aatcgacaat ctcttttcga agcaaacgtt
    17401 gcgcgaaata ctgtaaatgt gtaataaaac gcgtgtaatt cagtgaagtt tcatccaata
    17461 ccataccata atgatacgta acaatactta aaatatcttg aacaatttga gtcatcgcta
    17521 cagtcatgtg catctgttgc ccatcttgtc tagcatttac aatgtgaagc gcgataaaac
    17581 cagcttcatc ctcatctaaa cgaattccaa cttcttgctc gataaaatct agtgctttca
    17641 ttcccaccaa atactctgcg tgataaaatc gttttatttc ccataataat gcgtttttca
    17701 aattaatacc ttgattatac cgtgacacag cgaagttaat atgatcagtt agggtcaaat
    17761 aaatattgtc acttaaatct gtttccaaag tttcttgcgc atactgaacc acgtcatccg
    17821 caacacgtaa atgtttcagt ggaatctcac taagtaactc agagagcttt tctgaaagtt
    17881 catgtgtttc cattacgaat gttttttcaa tcttggatac ctccacctca tctccaagtt
    17941 tcttttgaaa agcaagacca cgacccatca ctacagactc cttgccactt ttaccctcgg
    18001 cgattacaac attgttattc agtatttttt tgataatcat gcattttcac ctctttcaaa
    18061 agaaaaaaac ccaaactaat tccaatgcta ttaatatcaa aatagcactt gaattaattc
    18121 aggttttgcc cgccttagca gtaacaatcc tatgcttttc tctaacatta tagtacaaaa
    18181 agaaaccgat tacaagtggt tttttgatat tcaattttgg tttactttat atcttcccta
    18241 ctttaccaca acttattcat tgacatgtag ttttctgcat gctatttttg gctggaggtg
    18301 ataaattatg gcaacacgct cggaacaaat ttttattaat ttgcctgtaa aagatttaca
    18361 agcaaccgtc gcttttttca cagaacttgg ctacgaattc aatccgcaat tcacagacga
    18421 aaatgctacc caaatgctca tcggagacaa tattttcgcc atgctcttga aagaagattt
    18481 cttccagact ttccataaag aaggcatcgc tgacacaaca aaagcacgcg aagtcctcat
    18541 caccatcacc caagatagcc gccaagcagt cgatacgctg gtcgatcatg cactaaaaat
    18601 cggcgcaaaa ccagcaggcg aaacacaaga ctacgacttt atgtatagca gaagttttct
    18661 tgacttagac aaccatctat gggaaatcgc ttatttagac gaatccgctt tacaataatt
    18721 acaaaaaaag ccgttggaat tcatttgatt ccagcggctt tcttgaattt ccgtattttt
    18781 ttaatcgccc agtcgtaatg acttgatgtg cttgaaataa atatggcgcc tagtgaagtt
    18841 gtattggtcc atttataata tttttttgta aatagttctt cctccgaatg ccctgcaatt
    18901 aaaaccattt ctttgttatg ggtttcatcc agtaattccc ttgcttgcgc taaatcagtc
    18961 tcttggtatt tctgccaaat gaccaaattt agctctggtg tcgttttcca cgtataacct
    19021 tctgctggca tcaatggttt ctttccaccc attccaactt cataccaatc cagcgccatc
    19081 ttatgccatt cgtgcaaatg tattacgaca tcccgaatat ttttatcccg gtcttcaaat
    19141 ggaaacgtga gctgttgctt ttcttttgga atagagttga ttaaatcgtt caattgttgg
    19201 tacttttccg tgctttgttg aagtaattct actttgttct ttggtcttac catagaaaca
    19261 ttaccccttt ctaacaatta tgtaagttta aattatcatt ttgtcgcttt acgcgaggga
    19321 tttacatgtc atttccctat acaataaagg taacactttt gcaaaggatg atggatatga
    19381 aaaaaatcgt tatacttatt ataagcttac tattactcgt tgggattgga ttcggtgtat
    19441 attactttaa aaatgccaat catataggtg cagacgtatc atatgttaaa atcacaacgg
    19501 acggcgaaaa aggcaaaaac gtaagcttca actattccta tacaatgcca gcatatgatg
    19561 aagccgggaa agaaacagaa gttacttttt ctgcagacaa aaatttacgc aaaggtgctt
    19621 atttaaaatt gtatattaaa gaagacaaag gcgtaacttc ctatgaagaa gtcccagaaa
    19681 aagaagttcc ctctaaagca gcagaaaaac ttaaataatc acccaatctc ctccttgcga
    19741 ggggattttt catattgaaa tatatatatc tatctcgcca ctcgtatgat accattcaaa
    19801 atctgttttg tacgctcgtt ttaattcact atctcgcgcc caaatcttct gccaagtttc
    19861 ttccacgcct ttatgactcg cattatctac agaaaaaact aaataatctc cagctttaat
    19921 taagacactc ttctcttcat cccagtcttt tgttcctacc aacaaatcat agtcaccttt
    19981 gtaatcactt gcataattac tatataccgc aaaaatatct cctgcaggct tatctaccat
    20041 tacatcaccc caaagctctg caatcggact aaaattatca ttgtttacac gtatcttttt
    20101 cccaaaaatc tctatatttt cttgtaaaat cattatttgc cgcctccttt taaaaccatt
    20161 atagcgaaca aaacctgaca actatctgtc aacaattcaa attaaaataa agtttttcca
    20221 cttcggattt gtagtctttt tgaagcgatg caggttctaa aattttcacg gcacttccaa
    20281 acatcaataa aaacgatatt atattgcgct ccaaatcata gaaaaagctt acacggacat
    20341 aatcgtctcc agtctccatt tcttcttgca aaaaataatc caacaatttc ccgagctgat
    20401 ttttcggaaa ttccaacaca attttcttca tttctgcagg ctggtgctcc gtttcttcga
    20461 cgtacataat cgatttacct atttctttca aagaagttat tcgcgttaat ttaaaatgac
    20521 gaatcgctgc tcttttgtgg caataggctt ctaaatacca acttccatcc atcaagttta
    20581 atttttgcgg cgaaatctcc cgcgttgttt ccgcgccact catagcgata tacgtaattt
    20641 taagttgttt atttgtcgta aaagctttct ggatataggc gacttttcgt ttcacttctg
    20701 cttcaatttg ctggcgatgt tgtgtcgctg aatcaaagaa aatatgctta ctagttggtt
    20761 tttcagtctg taatagcgtg attttttctc gcaaaatctc gtggctatca ttcagcataa
    20821 actccgaacg cgcctctaat gcctccagca aaatctgttt ttccgcctcc gaaaaagtaa
    20881 atgtcgccag cttatatgta tcgagcattg tgaacccgcc gttttttccc ggcaaagcaa
    20941 caactggaaa tcccgcataa agtagcgtat ccatatcgcg ataaatcgtc cttgtgctta
    21001 cttcaaattt ttcagccagc tcacttgcca gcacttttcg ctccaaaatc atgactagta
    21061 ttgctaaaat ccgttctagt ttcaccccaa aacctccaac accttttagt ttattatacc
    21121 atgcactatt agtgatcaaa aacccatgca tatgtgatgg ataaaacttc tcgcatcatt
    21181 cctttatact ttgcaaacgt ctttgatgtt gcaggaaggc ctgatgcatc aatcccttga
    21241 cgctttgcta acattagcgc tctatacata tgataatcac ttgtcacaat cactgttttt
    21301 cctaaattaa atttcgcatt actatattta atattctctt ctgttctctt agatttcgtt
    21361 tccgtttcaa tccgctttct tgcaattcct tcattaacca aatattcttc cataacggaa
    21421 gcttcagtcg cactttcatc agccccttgg ccaccactaa caatcacttt cgcctttgga
    21481 tattcgttta aataagcgac tgccgcatcc aatctttctt gcaaaactaa tgaaggaact
    21541 gctggggtcc cattcacttt tgcacctaaa atcaacactg tatcagcatt ttcacttggt
    21601 ttcgtcctag aaccaccaaa cataaaggcc gcgacgatta ataaatacat aaaaccaatt
    21661 atgattaaaa taatgacaat tttcctcaga cttctcatct agttcgtcct ccctacttct
    21721 taattaatag cttagcagaa gattttaaat aaaagagaaa gaaataatca agttaaggga
    21781 aatttaaaaa acaccccgaa acagttttga ggtgtttttg cattattagt tctactaaaa
    21841 atactcacat gtgattgatt ctattcagta ttatcataaa ttctccggct tttttaaata
    21901 tatcgcatac ataatt
//
LOCUS       DASDYK010000038        21775 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.038, whole genome shotgun sequence.
ACCESSION   DASDYK010000038 DASDYK010000000
VERSION     DASDYK010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 21775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21775
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.038"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(262..702)
                     /locus_tag="U0308_001419"
     CDS             complement(262..702)
                     /locus_tag="U0308_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003772666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316386.1"
                     /translation="MNSNEISEIIIQQNKGKTIIKLLYTLPILLFGIFILFKIKESLL
                     LGACGIILLVIVAPTYFTVAKHFFSGKPLLKVNQEGIEGWGKRFKWNEIEKVALRRDW
                     GAVYLTVYVRKNGGIHKYNINTKEIERSATELIKQIGYLKNKYE"
     gene            complement(736..1071)
                     /locus_tag="U0308_001420"
     CDS             complement(736..1071)
                     /locus_tag="U0308_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316387.1"
                     /translation="MYINLKSSDGNVITTKVGSCWTCVFLSFFGPLLRGDIKFFVLYV
                     ILDGAGLFITLNYDRDIGIAIMAMVTLLFESNYNTWFIRGKMNNGWEPETEKDREILL
                     EKGVIKTEV"
     gene            complement(1175..2137)
                     /locus_tag="U0308_001421"
     CDS             complement(1175..2137)
                     /locus_tag="U0308_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316388.1"
                     /translation="MSGKIKFNIAEAQNISLELKIAAGRYTQETEELLKVLKNNSLCD
                     KDQDVVEQRGRIEKNNQRLIEYEKFVNTNLAKSNSVIEELFMSVEVLYAQQVSEFRNP
                     NSAGYKELMGNVKAISYQKISQISGLGEMLTSKGSVGAIKDIRDTLLGTLVDDTYLKL
                     IDDTVEYQGENKNITDLYGDKISKVGSRRKKLDTPTKYLSTAYLISDTLKSFNSYGNS
                     KDSSRLAGDLTGIAITKGADFAVGKLATTALSGFGVSGVKGAIAGAIISVAADKIIDP
                     TVEYVKESKVEAKRDDWETKGIYKGWKKIRDLKLEYTMGNYQAS"
     gene            complement(2134..2448)
                     /locus_tag="U0308_001422"
     CDS             complement(2134..2448)
                     /locus_tag="U0308_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin B"
                     /protein_id="HEM2316389.1"
                     /translation="MAKEIKVNPDFLKKVESNVTNYIDAQKEVSVELLAVRTNLASNF
                     SGIACDEIKNYITELMNDLEKEFGVFITRNHEKVKALGESYKELDGQLGQTFNYGMER
                     TK"
     gene            complement(2460..3101)
                     /locus_tag="U0308_001423"
     CDS             complement(2460..3101)
                     /locus_tag="U0308_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316390.1"
                     /translation="MKSRNWLKGLGVTMIVVTLILTGCGNGDAEKTDTKEQTKSVEEE
                     GKEVKIESNEGKPQHEQLITVKLPPEAEYLNDETLEVYEQDKKKYDQTEQLITNNSVT
                     ILLGDFCYYEPAWSSLTCSAILVNGTDTNIEDLSFKAEIMNKPMSGKIFSDDKVPELT
                     KAKTGKFQPNEGIPIILVFSEENPKNEENAEPQKINIKDIKVKIKDIQYKAVK"
     gene            complement(3120..3428)
                     /locus_tag="U0308_001424"
     CDS             complement(3120..3428)
                     /locus_tag="U0308_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316391.1"
                     /translation="MVSPMPDKTVKMDKGSINPKLDKLISSLDNFDNINKKMGTIVGS
                     QEISGEAADALSESLLVLVSYGEQYSLVIRNLKEVIVDYCKSVEEIDKTAANAVSKGV
                     "
     gene            complement(3440..3874)
                     /locus_tag="U0308_001425"
     CDS             complement(3440..3874)
                     /locus_tag="U0308_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316392.1"
                     /translation="MNYDERVRVLIELKVDLSGKLEMMENEEALLCRQKHDFASAWSN
                     AKTEDAYRKLNEAVRKKIKETTEYAREIDEKITARIKRIEAAYKAEYQSNRSYTWRIA
                     EIDPIKFKEKYNERLNQLSYLSCDGSVKTRLIKEFRQNNFLK"
     gene            complement(3864..4181)
                     /locus_tag="U0308_001426"
     CDS             complement(3864..4181)
                     /locus_tag="U0308_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4176 domain-containing protein"
                     /protein_id="HEM2316393.1"
                     /translation="MLTKEILPIGSVVYLKESLKKVMITSRLITIQGDEEKEFYDYGG
                     VVYPEGTKDDNILAFDAEDITDVKFRGFVDDDEVVLVKRMREWQKEEFGVSPEEEDEM
                     LEL"
     gene            complement(4187..8683)
                     /gene="essC"
                     /locus_tag="U0308_001427"
     CDS             complement(4187..8683)
                     /gene="essC"
                     /locus_tag="U0308_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssC"
                     /protein_id="HEM2316394.1"
                     /translation="MNREALLIVSNGQQCHKNHLSPEKVVTIGNTIEHEITYPELAES
                     IEVKYDEGSWNAGTTALQANQAVNVENLAFYLCQDLHTQVYDVVTNISVTFGVGIEND
                     VTLDDTKSDFILLRDAKEKLFKLQVLNGEVYHNFSLVTEDCVLEPGDQLYTDGVTITI
                     GKEDISVLAVKNRVTSKLAPLFAADNSFGEDYPDYHRSPRIIYRAPEEKISMAKPSSK
                     PSKPTDGLIKIILPPLIMVAITVMISIFQPRGLYIIMTIAMSAVTITMAILNYIKSRK
                     KYKIDSKQRVESYDLYLKRKTKELHETSEKQRHALTYHYPDVTELEKMALRVDSRIYE
                     KTMFHHDFLTFRVGRGDEASSFSVEFQQEEFSQEKDELVEEAVKIKGQYLSINEVPVA
                     TDLMHGPVGYIGPRRLVLEQLQMLVMQTSLFHSYYDLQFITIFPEEEKADWDWMRWLP
                     HANMRDVNVRGFVYHERSRDQVLNSLYQILKERKQALTEQASKQEKLYFTPHYVVLIT
                     DEKLVLDHTVMEFFNEDPSELGVSLVFVQDVMESLPEHVKTVVDIRDAKSGNIILEQG
                     DLVNRAFVPDHLPADFDKEVISRALAPLNHLQNLKNSIPESVTFLEMYGVERVEELNI
                     AGRWAKNETYKSLAVPLGLRGKDDIVQLNLHEKAHGPHGLVAGTTGSGKSEIIQSYII
                     SLGVNFHPYEVAFLLIDYKGGGMANLFKNMPHLLGTITNLDGAQSMRALASIKAELQK
                     RQRLFGEHDVNHINQYQKLYKQGKATEPMPHLFLISDEFAELKSEQPEFMKELVSTAR
                     IGRSLGIHLILATQKPSGVVDDQIWSNSKFKLALKVQNASDSNEILKTPDAAEITLPG
                     RSYLQVGNNEIYELFQSAWSGADYVPDKESTDYIDTTIYAINDLGQYDILTEDLSGLD
                     KKDDLTKLPSELDAVIDHIHAYTEASGIKALPRPWLPPLPERIFAQDLHPVNFEEAWK
                     EPKKPLQATIGLLDQPELQAQVPLTLDLTKDGHVAVFSSPGFGKSTFLQSLVMDLARQ
                     HNPEQLHVYLLDFGTNGLLPLVDLPHIADTMMVDEVEKIQKFLRICLNEIKTRKKLLS
                     QYRVANIEQYERASGKELPNIIVVLDNYDAVKDAGLGDDFEKIITQITREGASIGMFM
                     IISASRHMSLRTQMATNIKQMIALYLIDKNDISSTVGRTDTPLEEYPGRALVKLETVT
                     TFQTTLPSHGEETIQQIEGIRNEAKLMREGWQGELPESVPMIPEKIKLADFCEWMETK
                     EVVANGNIPIGVDFEYVKPVGIDYKQTGVLIIADVIGRNLVSINKNVANSLVQNPNIS
                     LLISDTANFDLVEMSTKANLYSNNTEDLKQNMKKVLSIYQSRTEKADELRKAGDNLGV
                     TAMIQGLKDIVAFVGDYDILLKTLDEEDQKVLIDMINNGKTYGCYLILSGSIQAFKGY
                     GDLNKAVQAQRNYIFFDRLSNSSPFSFSFNIYREQELLPEEGYVIAGQEWQKIKIAKY
                     EEEV"
     gene            complement(8697..9893)
                     /gene="essB"
                     /locus_tag="U0308_001428"
     CDS             complement(8697..9893)
                     /gene="essB"
                     /locus_tag="U0308_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssB"
                     /protein_id="HEM2316395.1"
                     /translation="MNKTIEMDGTTYDFTYEDLVWSITFPKSKTRAKELAQLELLEKP
                     ATHFTPAKISSDSDSYTISYEIAKRTYGFEQVRKMGREDKLRALRNIADLGELLNTRY
                     TFFLHPDNLIFDINLVPSIVHRGIKNILPPYELTEETFFKQYQCFVIAMFSKKFSFEN
                     LYNGSLSGARGTQFEKSILDAKTVQDIATILEEAYVKEHAAVQKNMASVPKKKYSTFR
                     GLAVGFIIVAILLAIPVSYFAFVKVPLQNDLLTANENFLKTDYDKVITGLENVDPEKM
                     PQSVQYELAYSYVKGEKMSDKKKENIMNTISLKSDAKNLLYWIYNGRGEFSKSLDIAK
                     LLDDPTLAMYSLTKQIEQVQSDTTLSGDEKVEKLKTLEESLKEYDEKVNESTTTEDET
                     TNTEAK"
     gene            complement(9915..10166)
                     /locus_tag="U0308_001429"
     CDS             complement(9915..10166)
                     /locus_tag="U0308_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EsaB/YukD family protein"
                     /protein_id="HEM2316396.1"
                     /translation="MAKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKI
                     DYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDILEIL"
     gene            complement(10184..10699)
                     /gene="essA"
                     /locus_tag="U0308_001430"
     CDS             complement(10184..10699)
                     /gene="essA"
                     /locus_tag="U0308_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssA"
                     /protein_id="HEM2316397.1"
                     /translation="MKFKIAALLMLLCFAFAPGVLAADSDSYLENNGKMDIKTDRLQK
                     TEEEKTKELEQMEETELDKNGIPLFTDEMDEKIAKEKAAEKAEYDRIKDSLFEEESTS
                     GETVKKTKEKLFTDEYETTAVNTETPTTTETTVEDETKKTKQKTVGGAIAGTLVALAG
                     GIYVAARNVFE"
     gene            complement(10689..13895)
                     /gene="esaA"
                     /locus_tag="U0308_001431"
     CDS             complement(10689..13895)
                     /gene="esaA"
                     /locus_tag="U0308_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EsaA"
                     /protein_id="HEM2316398.1"
                     /translation="MKKVKWSILLFLVLAIFLSAGITYLALNQSSNKESKNNSEKTHK
                     MTIALVNEDQGDNFQGKQVEFGNQFVKSIEKDDTHEWYVVSRGVAESGLKRDVYNMMI
                     VIPSDFSEKAMSMTSSAPEKVTISYKVNDVGNSDLKAEAEKTAASVLEDFNSRIIDVY
                     FASILTTLQEAQDNIGTLVKEEKKYDAIYNKDVNNPLSSYTKQFKTVQDYTGTSKESF
                     QGFQDIMKEFEESLNLSQKENEEHMKNMDAFTKTQEENAPFGAEFTENLSKFDGTLSA
                     EDIRMQTAALEQANAKMTSEFQILEDSNSLLSQTQALQSYIAETNARIDAVDAEIMGT
                     LENHFRTAVYNDLLRILRENEYSDKLNEIGLKDLTGEDINAGFNKMIVKEIQSLPTYN
                     ADQLASIGLDEEMYKNVVTLSKEYYSNHRSAFGEGFSFTTDPKTLPTDTLKSDTINRL
                     KSEGVTLESSSYTVEGSDYPTEIILTLDENFTFSDVDCLVNGSSNPELVQQTAYGENG
                     IKLSIQALGSTPAEIKITGKAKLREGVNVPLIGAVNWNATLQQYEKKEYSEMPTIPSE
                     LDPTTPDTSLIVRKEPVPIKVTAPTYLNETKSSVKAITNTVKDYYKLQALFDLYYGID
                     ASDSGQIPDFSNYQVTLENSAKASSYYYIFNKEDVIGSFVNLTTDRFVADYTKKIKAF
                     EKRIDDYKNTMAEANSRSEDVTNRLNETTQEAINLNTNLALTLQNLESWREASKGLIE
                     ENGVVLEKSGEEATMALQLSSEFAGLLAESESLAGTSEGNLKSAEVVYKTFEAIDKEA
                     KNIQQSGETLVKEASTLSDDLSEKLEDDETFQKNFAKVMENSRVGDRQNENLYSFLSS
                     PVDKMNAGTIVAGDKSMPYFMILICTILAIFTSYVISHQEKKREQLNEFEKEMSLVFK
                     NIPITFLAICVGIIEGLIIGAISGFIFEVGEIGMFLWIGVCVLIMMTLVTAFSYLLRQ
                     FNMIGMSIILLVLSLYLFLTDAVGLNIDNESIFATFRTFSPLQYMEYLLNGILSAQKD
                     YIIVVYSLIGAALLFTGLNLFVWHRSKEEVEEDDSDEI"
     gene            complement(14044..14337)
                     /locus_tag="U0308_001432"
     CDS             complement(14044..14337)
                     /locus_tag="U0308_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WXG100 family type VII secretion target"
                     /protein_id="HEM2316399.1"
                     /translation="MSGQIRMSPSELRDRAKTYGQSGRDIEDILSRLSQLQEQLRSEW
                     EGQAFMRFDDQFEQLKPKVTEFANLMDQINDQLEKTANAVEEHDQQLSQNFGF"
     gene            complement(14640..15932)
                     /locus_tag="U0308_001433"
     CDS             complement(14640..15932)
                     /locus_tag="U0308_001433"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEM2316400.1"
                     /translation="MSSVVVVGTQWGDEGKGKITDFLSENAEAIARYQGGNNAGHTIK
                     FDGVTYKLHLIPSGIFYKEKISVIGNGMVVDPKALVEELKYLHDKGVDTSNLRISNRA
                     HIILPYHIRIDEADEERKGANKIGTTKKGIGPAYMDKAARVGIRIIDLLDKETFKEKL
                     EHNLGEKNRLLERFYELEGFKLEDILEEYYDYGQQFKEYVCDTSVVLNDALDDGKRVL
                     FEGAQGVMLDIDQGTYPFVTSSNPIAGGVTIGSGVGPSKINHVVGVAKAYTTRVGDGP
                     FPTELFDTIGDTIREVGHEYGTTTGRPRRVGWFDSVVVRHARRVSGLTDLSLTLLDVL
                     TGIETLKICVAYKLDGKTITEFPASLKDLARCEPVYEELPGWTEDITGVTSLDDLPVN
                     CRHYMERIAQLTGVQVSMFSVGPDRAQTHVIKSVWRLA"
     gene            complement(16190..17542)
                     /gene="dnaB"
                     /locus_tag="U0308_001434"
     CDS             complement(16190..17542)
                     /gene="dnaB"
                     /locus_tag="U0308_001434"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEM2316401.1"
                     /translation="MDNNFQDRTPPQNIEAEQAVLGAIFLEPNALITASEILMPDDFY
                     RTGHQIIFETMLDLNDHGKAVDVLTVYEALAAKGNLEDAGGLPYLTELSGAVPTAANL
                     EYYAHIIEDKALLRRLIRTATQIATDGYSREDELDMLMDEAEKSILEVSQRKNVGAFK
                     NIKDVLVKTYDDIEILHNRKGDITGIPTGFNELDKMTAGFQRNDLIIVAARPSVGKTA
                     FALNIAQNVATKTDENVAIFSLEMGAEQLVMRMLCAEGNINAQNLRTGALTSDDWQKL
                     TIAMGTLSNSGIYIDDTPGVRVNEIRSKCRRLKQETGLGMIVIDYLQLIAGSGRGGEN
                     RQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADI
                     VAFLYREDYYDREGENDGTIEIIIAKQRNGPVGDVKLAFVKEYNKFVNLEVRYDDAMA
                     "
     gene            complement(17567..18013)
                     /gene="rplI"
                     /locus_tag="U0308_001435"
     CDS             complement(17567..18013)
                     /gene="rplI"
                     /locus_tag="U0308_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEM2316402.1"
                     /translation="MKVIFLKDVKGKGKKGETKNVADGYANNFLIKNGYAVEANNAAL
                     STLSAQKKKEDKLAAEELAEAKALKEKMENLTVELKAKSGEGGRLFGSITSKQIAQTL
                     EKTHGIKIDKRKMDLPEAIRALGHTKVPVKLHHEVTATLDVHVSEE"
     gene            complement(18016..19989)
                     /gene="pdeA"
                     /locus_tag="U0308_001436"
     CDS             complement(18016..19989)
                     /gene="pdeA"
                     /locus_tag="U0308_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP phosphodiesterase PdeA"
                     /protein_id="HEM2316403.1"
                     /translation="MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGI
                     ILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPF
                     MSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLY
                     DRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHR
                     IYLKRISTDRFMAFLTEEMLKRLEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDL
                     IQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRTRVRARVISQALQE
                     LITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEI
                     EEYPNVIKNIVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRS
                     EEFVGSPVLVYIEPYASSTAELITELFEYQPDLEQVGKIEATALLSGIVVDTKNFTLR
                     TGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAIATGHED
                     EEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGG
                     HLSNAATQLKDVTIAEAEKQLISAIDAYWKGET"
     gene            complement(20156..20884)
                     /locus_tag="U0308_001437"
     CDS             complement(20156..20884)
                     /locus_tag="U0308_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2316404.1"
                     /translation="MLPVFICEDNRMQRERLTKYIEDYIMVEHFDMKLELSTGDPFEL
                     VSRMPTHQGMGLYFLDIDLGQPDMNGFELAQEIRKFDPRGFIIFITTHAELSYMTFTY
                     KVEALDYIIKDDIDLLHDRVLACMKQAEERISNDQDMQKYFTFKVSDKKIIHELLDDI
                     LFFETAPTIHKVILHGKNRQVEFYGKLKNIEKMLDESFYRCHRSYIVNKKNIHELDTT
                     KGVVKMSNGENCYASSKLIKSLSL"
     gene            complement(20903..>21775)
                     /locus_tag="U0308_001438"
     CDS             complement(20903..>21775)
                     /locus_tag="U0308_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GHKL domain-containing protein"
                     /protein_id="HEM2316405.1"
                     /translation="SRFVEHRKYAYIIFSIVALTVLAFYMNIYAGSIAGFDGSVLKIN
                     TLIFTGYTILLIVIVTVVINTATNELKVQNQKEQLEQLQDYVTTLESLHREMRVFRHD
                     YVNILSTLVGYIDNNDMPGLKYYFENNIVPINKTIESNNYKISLLQNIHVIELKGLLA
                     VKLIRAQELKIDAILEVVEPIDKISMDSIDLCKVVGILLDNAVEAALTCENPVIRIAF
                     VKKGDSIIIVFANSLPVNMPPIYKIFEEGFSTKGEGRGLGLASLREIMKKYSHVALDT
                     KVTDREVIQELEIM"
BASE COUNT         6081 a         4785 c         3305 g         7604 t
ORIGIN      
        1 gagtttaaag tctggtggaa cagttttatt ccgtcttgat tgattttcgg atcaaattcc
       61 atctcttttc tatatttttt atggaaagcg atatatctcc aatcatcaac caagttttta
      121 actttactct cgttcttttt accagtccca tatttctgta ataatttatg ttgctaaaaa
      181 accacggacg ctcgcttgcc gttcatatcg ttcatggttc tagcatatca tttaccactg
      241 tttcttagac cttgtaatta atcattcata tttgtttttt aaataaccta tttgtttgat
      301 taattctgtg gcagaacgtt ctatttcttt tgtatttata ttatatttgt gaattccgcc
      361 attcttccgt acatatacag tcagatatac ggcaccccag tctctacgca aggctacttt
      421 ttcaatttca ttccacttaa accgtttacc ccatccctca ataccttctt gattcacttt
      481 aagcagtggc ttacccgaaa aaaaatgctt agctacagta aaataagttg gtgccacgat
      541 aactaaaagg attattccac aagcacctag taataacgat tcttttattt taaataaaat
      601 aaaaattcca aataataata taggcaaggt ataaagcaat ttaataattg ttttcccttt
      661 attttgctga attataatct ctgaaatttc atttgaattc attttattga gtccctttcg
      721 aattggattt atatactata cctctgtttt aatgacgcct ttttctaaca atatttctcg
      781 atctttctct gtttctggtt cccacccgtt gttcatcttc ccgcggataa accatgtatt
      841 ataattggat tcaaagagta aagttaccat agccatgata gctattccga tatctctatc
      901 ataattcaaa gtgatgaaaa gccccgctcc atctaatatt acataaagaa cgaagaattt
      961 aatatctcct cggagtaaag gaccaaagaa cgaaagaaat acacaggtcc agcaagaacc
     1021 aacttttgtt gtaatcacat ttccatcact ggattttaaa ttaatataca ttttttcctc
     1081 cttttatttg taacgcacat ggtgaagttg ttagtagtct catatagata ctgctgtcat
     1141 ttttattagg taaaaaatct tatattttta actgttaact tgcttgatag ttacccattg
     1201 tatattctag ttttaaatct cgaatttttt tccagccttt atatatacct tttgtttccc
     1261 agtcatccct ctttgcttct accttgctct ctttaacata ttcaaccgtc ggatcaataa
     1321 ttttatctgc agcaacggaa ataatggcgc ctgcgatagc gcctttaaca ccacttacac
     1381 caaaaccaga taatgccgta gtagctaatt tcccaacagc aaaatccgca ccttttgtta
     1441 ttgctatacc ggttagatct cctgcaagtc gagaggaatc tttgctattt ccataactgt
     1501 taaaactttt tagcgtgtct gagatgaggt aggctgttga aaggtatttg gttggagtgt
     1561 ccaatttttt tctccttgac cccactttag atattttatc cccatataaa tcagttatat
     1621 ttttattttc tccttgatat tcaactgtat catcaattaa tttcaagtaa gtatcatcta
     1681 ccaatgttcc aagtagtgtg tctctgatat ctttaattgc tcccaccgaa cctttcgatg
     1741 taagcatttc tcccaatcct gaaatctgtg aaattttttg atatgatatc gctttcacat
     1801 ttcccattaa ttctttataa cccgcagaat tagggtttct aaactcagaa acttgctgtg
     1861 catacaatac ttctacactc ataaacaatt cttctataac tgaattagat ttagcgagat
     1921 ttgtgtttac aaatttctca tattctataa gtctttggtt attcttctct attcgccccc
     1981 tctgttcaac gacatcttgg tctttatcac ataaactatt atttttcagc acttttaata
     2041 gctcttctgt ttcttgcgta tacctacctg ctgcaatttt cagctcaaga ctaatatttt
     2101 gagcttcggc gatattgaat tttatttttc cgctcattta gtcctctcca ttccatagtt
     2161 aaaggtttgt cccaactgac catcaagttc tttataactt tcccctaacg ccttaacttt
     2221 ttcatgattc cttgtaataa atacaccaaa ttctttttct agatcattca ttaattctgt
     2281 tatataattt tttatttcgt cgcaagcaat acctgaaaaa ttacttgcta agttggtcct
     2341 aactgctagt aattcaacag aaacctcttt ctgggcatca atgtaatttg ttacattgct
     2401 ttcaaccttc ttcaaaaaat ctggatttac cttaatttct tttgccatct ttctccctcc
     2461 tatttaactg ctttatattg aatatccttt atcttaacct ttatatcttt aatgttaatt
     2521 ttttgaggct ccgcattttc ctcatttttc gggttctctt ctgagaaaac taaaataatt
     2581 ggtataccct cgtttggctg gaattttcct gtttttgctt ttgtaagttc tggaactttg
     2641 tcatctgaaa aaatttttcc tgacattggc ttattcatta tttcagcttt gaagctaagg
     2701 tcttcaatat ttgtgtcagt tccattcaca agaattgcag aacatgtaag actgctccat
     2761 gccggctcat aatagcaaaa atcacctaat agaattgtaa ctgagttatt agtaattagt
     2821 tgctctgtct ggtcatactt ctttttatct tgctcataca cttctaacgt ttcatcattt
     2881 aaatactctg cttctggcgg caacttcact gttataagtt gttcatgctg tggcttccct
     2941 tcattactct caatctttac ttcttttcct tcttcttcaa cacttttagt ctgttccttt
     3001 gtatctgtct tttcagcgtc tccatttccg catcccgtta aaattaaagt aacgacaatc
     3061 attgttactc ccaatccttt taaccaattt ctacttttca tagtttaacc tctttctttt
     3121 taaacgcctt tacttactgc gtttgctgct gttttatcaa tttcttccac acttttacaa
     3181 tagtcgacta tcacttcttt taggtttcta attactaaac tatattgttc cccataactt
     3241 actagcacta ataggctctc agataaagca tctgctgctt ccccactaat ctcctggcta
     3301 cctactatag tgcccatttt cttattgata ttatcaaaat tgtctagact tgaaattagt
     3361 ttatctaatt taggattaat acttccttta tccattttta ctgttttatc tggcattgga
     3421 cttaccatat ttcatcctcc tatttcagga aattattttg ccgaaactct tttattaaac
     3481 gtgtttttac actgccatca catgataagt agcttaactg atttaatctt tcattatact
     3541 tttctttaaa tttaattgga tcgatttctg caatacgcca tgtatagctc ctattactct
     3601 gatattctgc tttatatgct gcttcaattc gtttgatacg agcagtaatt ttttcatcaa
     3661 tttctcttgc atattccgtt gtttctttga ttttctttct aactgcttca tttaattttc
     3721 tgtaagcatc ctctgttttt gcatttgacc aggcacttgc aaaatcatgt ttttgtctac
     3781 ataataacgc ttcttcattt tccatcattt ctaatttccc ggacaaatca accttcaact
     3841 caattaaaac tcgtacacgt tcatcataat tcaagcatct catcctcctc ttctggagaa
     3901 acaccaaatt cttctttctg ccattctctc attctcttca ccaagactac ctcatcatca
     3961 tctacaaaac ctctaaactt cacatctgtt atatcttctg catcaaatgc caaaatattg
     4021 tcatcctttg tcccttctgg ataaactaca cctccataat cataaaattc tttttcttca
     4081 tctccctgaa ttgtaattaa tctactcgta atcataactt tcttcaggct ttcttttaaa
     4141 taaacaacgc ttccaatagg taatatttct tttgttagca ttttccttac acctcttctt
     4201 catattttgc aatttttatt ttttgccact cttgtcctgc tattacataa ccttcctcag
     4261 gtaataattc ttgttctcta taaatattaa acgagaagga gaatgggctt gaattcgata
     4321 gtcgatcaaa gaatatatag tttctttgag cttgaacagc tttattcaaa tcaccatatc
     4381 ctttaaatgc ttgaatcgaa ccacttaaaa ttaaatagca accatatgtt tttccattgt
     4441 taatcatatc tattagaact ttttggtctt cttcatcaag agtttttagt aagatatcgt
     4501 aatctcctac gaaagcaact atatctttta atccttgaat catggcagtt acgcctaaat
     4561 tatctcctgc ttttcgaagt tcatctgctt tttcagttct ggattgataa atagagagta
     4621 cttttttcat attctgcttc aaatcctctg tgttgttact gtataaattg gctttagtag
     4681 acatttccac taaatcaaaa ttcgctgtgt cgctaattaa gagagaaata tttggatttt
     4741 gcacaagaga attagctaca tttttattta tgcttactaa gtttcgtcca attacatctg
     4801 caataattag tactccggtt tgcttgtaat caatgcctac tggttttacg tattcaaaat
     4861 caactccgat aggtatattt ccatttgcaa cgacctcttt agtttccatc cattcacaaa
     4921 aatcagctag tttaattttt tctggaatca ttggtacgct ctctggaagt tctccttgcc
     4981 aaccttctct cattaatttt gcttcatttc gaataccttc aatctgttga attgtttctt
     5041 ctccgtgcga tggtaacgtc gtttgaaatg ttgtaactgt ttctaatttt acaagcgctc
     5101 ttcctggata ctcttcaagt ggtgtatccg ttcgaccaac agttgatgat atatcatttt
     5161 tatcaattag atataaagca atcatttgtt taatattagt agccatttgt gttctcaaac
     5221 tcatatgcct tgatgcgcta ataatcataa acattccaat ggatgcacct tcacgagtaa
     5281 tttgagtaat gattttttca aaatcatccc ctaagcctgc atcttttaca gcgtcgtaat
     5341 tatctagaac aacaataata ttaggtagtt cttttccact tgctctttca tactgctcta
     5401 tatttgcaac acgatattgg ctaagaagct tcttccttgt ttttatttca tttaggcaga
     5461 ttcgtaaaaa tttctgtatt ttttcaactt catccaccat cattgtatca gcaatatgtg
     5521 gcagatctac tagaggtagc aacccattcg tcccaaaatc caacaaataa acatgcagtt
     5581 gctctggatt atgttgacga gctaaatcca tcactaaact ttgcaagaag gtggatttcc
     5641 caaaccctgg acttgagaat acagccacgt gtccatcttt tgttaaatcg agtgttaatg
     5701 ggacttgtgc ttgtaattcg ggttgatcca gtaaaccaat tgttgcttga agtggttttt
     5761 tcggttcttt ccatgcttct tcaaaattga ctggatgtaa gtcttgggcg aaaattcgtt
     5821 caggtagcgg cggcaaccaa ggtctcggca acgccttaat cccagaagcc tccgtatacg
     5881 catgaatatg atcaatcacc gcatcaagtt cactcggcaa cttagtcaaa tcatccttct
     5941 tatctaatcc gctcaaatcc tctgtcaaaa tatcatactg acctaaatca ttaatcgcat
     6001 aaatcgtcgt atcaatataa tccgtgcttt ccttatctgg cacgtaatcc gcaccactcc
     6061 aagcactttg gaacagttcg taaatttcgt tattaccaac ttgcaagtac gaacggcctg
     6121 gtagtgtgat ttctgctgcg tctggtgttt tcaaaatttc gtttgaatcg ctggcgtttt
     6181 gtactttgag ggctagtttg aatttggagt tggaccagat ttggtcatcc acgacgccac
     6241 ttggtttttg ggttgctagg attaaatgga ttccgagtga acgcccgata cgtgctgtcg
     6301 aaacaagttc tttcatgaat tctggttgtt ctgatttcaa ctcggcgaac tcatctgaaa
     6361 taaggaataa atgcggcatt ggttcggtcg cttttccttg tttgtatagt ttttggtatt
     6421 ggttgatgtg gttaacatcg tgctcgccaa ataaccgttg ccttttctgc aattcggctt
     6481 tgatggaagc tagtgcacgc atggattgcg cgccgtccaa gtttgtaatt gttcccagta
     6541 aatgtggcat atttttaaat aagttcgcca taccgccgcc cttatagtca atcagcaaga
     6601 acgcgacttc atatgggtgg aaattgacgc caagtgagat aatgtaagac tgaatgattt
     6661 ctgatttacc agaaccagtt gttccggcta ccaaaccatg cggcccgtgc gctttttcat
     6721 gtaaattcag ttgaacgata tcgtcttttc cgcgcaagcc aagtggtaca gcaaggctct
     6781 tatacgtttc atttttcgcc cagcgtccag caatgtttaa ctcttcgacg cgctctacac
     6841 cgtacatttc aagaaaagta acggattctg ggatcgagtt tttcaagttt tgaagatggt
     6901 ttagcggcgc aagagcccgg ctgattactt ctttgtcaaa atctgctggc aaatgatccg
     6961 gcacgaacgc tcggtttaca aggtcgcctt gttccaaaat aatgttcccg ctcttcgcat
     7021 cacgaatatc cacgaccgtt ttcacgtgtt ctggcaagct ctccattacg tcctgtacga
     7081 acactaaaga aacacctagt tcgcttggat cttcattgaa gaattccata accgtgtgat
     7141 cgagtactaa tttttcgtcg gtaattaaaa ccacataatg tggcgtaaag tataattttt
     7201 cctgtttgct cgcttgttca gtaagcgctt gtttacgctc ttttaaaatt tgataaagcg
     7261 agttcaacac ttggtcgcgc gaacgttcat ggtaaacaaa accacgcaca ttcacatcac
     7321 gcatattcgc atgcggtagc cagcgcatcc agtcccaatc cgccttctct tcttctggga
     7381 aaatcgtaat aaattgcaaa tcataataac tatggaaaag ggatgtttgc attactaaca
     7441 tttgcagttg ttctaatact aaacggcgtg gcccgatata ccccactggt ccgtgcatta
     7501 aatctgtcgc aactggcact tcattgattg ataaatattg ccctttaatt ttcacagctt
     7561 cttctacaag ttcgtctttt tcttggctga actcttcctg ttggaattcc acggaaaagc
     7621 tacttgcttc gtcgcctcga ccaactcgga aagtcaagaa atcatgatgg aacattgttt
     7681 tttcgtaaat ccgcgaatcc acacgtaacg ccattttttc tagttcagtt acgtctggat
     7741 agtgataggt taaagcgtga cgctgttttt cgcttgtttc gtgcaattct ttcgtttttc
     7801 gttttaaata caaatcgtag ctttccacgc gttgtttgga atcgattttg tattttttac
     7861 gtgattttat gtagttaaga atcgccattg tgattgtcac tgctgacatt gcgattgtca
     7921 taataatata aagtccacgt ggttggaaaa tggaaatcat gaccgtaatt gccaccatga
     7981 taaggggtgg taaaataatt ttaattaagc catctgttgg ttttgagggt ttacttgacg
     8041 gtttcgccat gctgattttt tcttctggcg cacggtaaat aatccgcggt gaacggtggt
     8101 aatccggata atcttccccg aacgaattgt ccgcagcaaa taaaggcgct aatttgctcg
     8161 tcacgcgatt tttcacagct agcacactaa tatcttcttt tccgattgta atcgtcacac
     8221 cgtccgtata gagctgatca cccggttcta gaacgcagtc ttccgttact agagaaaagt
     8281 tatgataaac ttcgccattt aagacttgta acttaaacag tttttccttt gcatcacgta
     8341 aaagtataaa atctgatttt gtatcatcta atgtgacatc attttctatt ccaacgccaa
     8401 atgtcacaga aatattcgtt acaacatcat aaacttgtgt atgtaaatct tggcatagat
     8461 agaatgctaa gttctctaca tttacagctt gattcgcttg gagcgctgtt gttccagcat
     8521 tccaagagcc ttcatcgtat ttaacttcaa tcgactcagc cagttcagga taagtgattt
     8581 cgtgttcgat tgtattccca attgtcacga ctttttcagg agacaagtgg tttttatgac
     8641 attgctgccc gttactaaca attaataaag cctctctatt catggtccat tctcccttat
     8701 tttgcttctg tatttgttgt ttcatcttca gttgtagttg attcatttac tttttcatcg
     8761 tattctttca agctttcttc caaagttttt agtttttcca ctttttcatc gccgcttaat
     8821 gttgtatcac tttgtacctg ttcaatttgt tttgttaaac tgtacatcgc aagcgttggg
     8881 tcgtctaaaa gtttggcaat atcaagtgat ttactaaatt ctccgcgacc attgtaaatc
     8941 cagtaaagta agtttttggc gtcagatttt aagctgattg tattcataat gttttctttc
     9001 tttttatcgc tcattttttc gcctttaaca taggaataag ctaattcata ttggacagac
     9061 tgcggcattt tttctggatc cacattttct agacctgtaa tcactttatc gtaatctgtt
     9121 ttcaggaaat tctcgtttgc cgttagtaag tcattttgca gagggacttt aacgaaggca
     9181 aaataactta ctggaattgc aagtaaaata gcgacgataa tgaaaccaac cgccaaccca
     9241 cggaaagtac tgtatttttt cttcggtacg cttgccatat ttttttgaac cgccgcatgt
     9301 tctttcacgt atgcttcttc taaaatagta gcaatatctt gcaccgtttt tgcatctaat
     9361 atactcttct caaattgcgt tcctctagcc cctgatagcg agccattgta caagttttca
     9421 aaagagaatt tcttagaaaa catcgcaata acgaaacatt gatattgttt gaaaaaagtt
     9481 tcttctgtta gttcataagg cggtaatata tttttaatgc cccgatgaac aatacttggc
     9541 actaagttaa tatcgaaaat cagattatcc gggtgtaaaa agaatgtata gcgcgtgttt
     9601 aacaattcgc ctaaatccgc aatattccgc agtgcgcgca gtttatcttc acgtcccatt
     9661 tttcgaactt gttcaaatcc ataagtacgt ttcgcaatct cataagaaat tgtatacgaa
     9721 tcgctatcac ttgagatttt tgcaggagta aaatgtgtcg caggtttttc taatagttct
     9781 agttgtgcga gttctttagc gcgtgttttt gattttggaa acgtaatgct ccaaactaga
     9841 tcctcataag taaaatcgta agttgttccg tccatttcaa ttgtcttatt catcgttttt
     9901 attctccttt ttttctataa aatttctaag atgtctccgt ccgcaatttg aaaattagtc
     9961 aatttgtcat catcgcttag taatatcgct ttattcgttg tttttatcgt acatttggac
    10021 aaatctttgt aatcgatttt gagcgtttct gccaaattga taattaatgc tttgattggt
    10081 tgatgcaccg gaattcgcaa atcatacttg cttgctcccc aattagtgaa atcaactgtc
    10141 acattcatat gtgtgttttt agccatttaa aactccccgc tttctattca aaaacattgc
    10201 gcgcagccac ataaatcccg cctgctaaag ctacaagtgt tcctgcaatt gctccaccaa
    10261 ctgttttttg ttttgttttt ttcgtttcat cttctactgt tgtttccgta gtagtaggtg
    10321 tttccgtgtt tacagctgtt gtctcgtact cgtctgtaaa caacttctct ttcgtttttt
    10381 tcactgtttc accagatgta gattcctctt caaaaagtga gtctttaatc cggtcatatt
    10441 ccgctttctc tgccgctttt tctttggcga ttttttcgtc catttcgtca gtaaaaagtg
    10501 gaattccgtt cttatcgagc tccgtttcct ccatctgttc tagttctttt gttttttctt
    10561 cttctgtttt ttgaagtcta tctgttttga tgtccatttt cccattgttt tctaaatagc
    10621 tatctgaatc cgcagcgaga actcccggag caaaagcaaa acaaagtaac ataagtagtg
    10681 ctgctatttt aaatttcatc tgaatcgtcc tcctctactt cttctttaga acggtgccag
    10741 acaaataggt tgagaccagt aaataataga gccgccccaa tcaaactgta tacgacaata
    10801 atgtaatctt tctgggcact taaaatccca ttcaataagt attccatgta ttgaagtggc
    10861 gagaacgttc tgaacgtcgc gaaaatagat tcattatcaa tgttaagtcc aactgcatcc
    10921 gttaagaata gatacaaact taaaacgagt aaaataatcg acatcccaat catgttgaac
    10981 tgacgtaata aatatgaaaa agcagtaact aacgtcatca taattagaac gcagacacct
    11041 atccatagga acatcccaat ttctccaact tcaaaaataa atcctgaaat ggcgcctatt
    11101 atgagcccct caataatccc aacacaaatc gctaggaaag taattggaat atttttaaag
    11161 acaagcgaca tttctttctc aaattcattt aattgttcac gttttttctc ttggtgtgaa
    11221 ataacgtagc tagtgaaaat tgccagaatc gtacaaatca aaatcatgaa gtatggcatt
    11281 gatttgtcac ccgcaacaat agtcccagca ttcatcttat cgaccggact acttaagaaa
    11341 ctatatagat tttcattttg tcgatcacca acacggctat tttccataac cttagcgaaa
    11401 tttttctgga acgtttcgtc gtcttccaat ttttcgctta aatcatcgga tagtgtagat
    11461 gcttctttta ctaaagtttc tccgctttgt tgaatatttt tggcttcctt atcaatcgct
    11521 tcaaaagttt tgtacacgac ttccgctgac ttcaaattac cttcagaagt accagctaac
    11581 gattcacttt ccgctaaaag cccggcaaac tcggagctta attgcagtgc catcgtggct
    11641 tcttcgccag atttttctaa aacaacgcca ttttcttcta ttaaaccttt gcttgcctct
    11701 cgccaagatt ctaggttttg caacgttaac gctagatttg tatttaaatt aatagcttct
    11761 tgcgtcgttt cgtttaatct atttgttacg tcttctgatc tggaattggc ctcagccatt
    11821 gtatttttgt agtcatcaat tcgcttctca aaagctttga tttttttcgt ataatctgcc
    11881 acaaaccgat ctgtagtaag atttacaaag ctaccaatca catcttcttt attaaaaata
    11941 taataatacg aggatgcttt cgcagaattt tctaatgtca cttgataatt actaaaatcc
    12001 ggtatttgtc cagaatcact cgcatcaatt ccgtaatata aatcaaataa tgcttgtagt
    12061 ttatagtaat cttttactgt attagtaatt gcttttacag aactcttcgt ctcattcaaa
    12121 tatgttggtg cagtgacctt aatcggtaca ggttcttttc taactattaa tgaagtatcc
    12181 ggggtagtag gatcaagctc tgatggaatt gttggcattt cactatattc ttttttctca
    12241 tattgctgca gtgtagcatt ccaatttaca gcaccaatta atggaacatt cacaccttct
    12301 cgcaacttcg cttttccggt gattttaatc tctgccggtg tacttccaag cgcctgtata
    12361 ctaagcttta tgccattttc tccgtatgcg gtttgttgaa ctaactctgg attactgctt
    12421 ccattaacca aacaatcaac atctgaaaaa gtgaaatttt catctaaagt tagaattatt
    12481 tctgttggat aatcgctacc ttccaccgta taggaactgc tttctagcgt gaccccttcg
    12541 gatttcaatc gattaatcgt atcgcttttc agtgtgtcag ttggtagagt tttgggatca
    12601 gtcgtaaagc taaaaccttc gccaaaagca ctgcgatggt tactataata ttccttagag
    12661 agcgttacaa catttttgta catctcttca tcaagcccaa tcgacgctaa ttgatccgca
    12721 ttatatgttg gtaatgattg tatttcctta acaatcattt tgttaaagcc agcattaata
    12781 tcttctccgg tcaaatcttt aaggccaatt tcattcaact tatccgagta ctcgttttct
    12841 cgtaaaatac gcaacaagtc attataaaca gccgtccgaa aatgattttc gagcgttccc
    12901 ataatctcgg catccaccgc atcaatccgt gcattggttt cagctatata gctctgtaag
    12961 gcctgtgttt gtgataacaa tgaattacta tcttctaaaa tttgaaattc tgaagtcatt
    13021 ttcgcattgg cttgttctaa agcggccgtt tgcattcgaa tatcttctgc tgataaagtg
    13081 ccatcaaatt ttgacaaatt ttctgtgaat tctgccccaa aaggagcatt ttcctcttgt
    13141 gtttttgtaa aagcatccat gtttttcata tgttcttcgt tttctttttg agagagattt
    13201 aggctttcct caaattcttt cataatatct tggaaacctt ggaagctttc tttagaagtt
    13261 cctgtgtagt cttgcaccgt tttaaactgt tttgtgtagc tggataacgg attatttaca
    13321 tctttgttgt agatagcgtc atactttttc tcttctttaa ctagggttcc aatattatcc
    13381 tgcgcttctt gtaaagttgt taaaatgctt gcaaaataaa catcaataat ccgtgaattg
    13441 aaatcttcca atacagaagc tgctgttttt tcggcttccg cttttaaatc gctatttcct
    13501 acatcgttaa ctttgtagct aattgtcact ttttccgggg cgctcgaagt cattgacatt
    13561 gctttttcag aaaagtcact cgggataacg atcatcatat tgtatacatc tcgttttaag
    13621 ccactttctg caactccgcg gctaacaacg taccattcat gcgtatcatc tttttcaata
    13681 cttttaacaa attgattacc aaactctact tgtttacctt ggaagttgtc tccttggtcc
    13741 tcatttacaa gtgcgatagt catcttgtgt gttttttcac tattattttt agactcctta
    13801 ttcgaacttt gattcaaagc caaataagta attcctgccg aaagaaaaat cgccaagact
    13861 aaaaagagta aaatactcca ttttactttc ttcattcatg tcccactccc gctgtgtctt
    13921 ttttatataa ataccttttt aggcataagc tttctatgtt tagaaaaagc catgcaaaaa
    13981 actgcatggc ttttcgtaaa gcatccaacg atatttgtat gtatgcccca ctttttgttg
    14041 attttagaat ccgaagtttt gagaaagttg ttgatcgtgc tcttctactg cgtttgctgt
    14101 cttctcaagt tgatcgttaa tttgatccat taagtttgcg aattcagtta cttttggttt
    14161 taattgttca aattgatcat caaaacgcat aaaagcttga ccttcccatt cgctacgtag
    14221 ttgttcttgt agttgactta aacgacttag aatatcctca atatcccgac cactttgacc
    14281 gtaagttttc gcgcgatcac gtagttcgct tggactcata cgaatttgac ctgacattca
    14341 cttcatctcc tcttattatc tattgtgaat aagatatcac tctcaaatta taacatgaat
    14401 tcacaaagta aaatgtgaca aaaatacgaa taaaactcct ataaagactt gataataggt
    14461 cttttaaaaa caacatcact atacaaaaag atgccttttt cacaaacacc ttcccctttt
    14521 gttaactttt tcaatttttc ggataaaaaa ttgtatactt ttccagaatc actattattt
    14581 ttatacagca aaaaagccca tccaagaata caccttagat gggcttgata tttattttat
    14641 taagctaaac gccaaacgct tttaatgaca tgtgtttgag cgcgatcagg gcctacagag
    14701 aacatagaaa cctgcacacc agttagctgt gcaatacgct ccatgtaatg gcggcagttc
    14761 accggaagat catcgagtga tgtaactcca gtaatatctt ccgtccagcc tggaagttct
    14821 tcatatacag gttcgcaacg agctagatct ttcagacttg ccgggaactc tgtaattgtt
    14881 tttccgtcta atttgtaagc tacgcagatt ttaagtgttt caattcctgt caaaacatcc
    14941 agtagtgtta acgataaatc tgttaagcca ctaacacgac gcgcatggcg aaccactaca
    15001 ctgtcaaacc aacctacacg gcgcggacga ccagtcgttg taccatactc atgaccaacc
    15061 tcacggatag tgtccccaat agtatcgaat aattctgttg ggaaaggacc atcaccaaca
    15121 cgtgttgtat aagctttcgc cacaccaaca acatgattga tttttgaagg acctacgcca
    15181 ctaccgatag ttacgccacc agcaatcggg ttacttgaag ttacaaatgg atatgttcct
    15241 tgatcaatat caagcataac cccttgcgca ccttcaaata atacacgttt accatcatct
    15301 aatgcgtcat ttaaaacaac agatgtatcg caaacatatt ctttaaattg ttgaccatag
    15361 tcataatatt cttctaaaat atcttctagt ttaaagcctt ctagttcgta aaaacgttct
    15421 aataaacggt ttttctcgcc aagattatgc tctaatttct ctttaaatgt ttctttatct
    15481 aataaatcaa taatacgaat acctacacgc gctgctttat ccatgtaagc tgggccaata
    15541 ccttttttcg ttgtaccgat tttgtttgcg cccttacgtt cttcgtcagc ttcatcaata
    15601 cgaatgtgat atggtaaaat aatgtgcgca cggttagaaa tacgcaaatt agaagtatcc
    15661 acgcctttat catgaagata ttttaattcc tccactaaag cttttggatc cacaaccata
    15721 ccgttaccaa taacactaat tttttctttg taaaagatac ctgatggaat taagtgtaat
    15781 ttgtacgtta cgccatcaaa cttaattgta tggcctgcat tgttcccacc ttgatatcta
    15841 gcaatcgctt ctgcattttc ggaaagaaaa tctgtaatct tcccttttcc ttcatcgccc
    15901 cactgtgttc ctactacaac aactgaagac atttaaacac ctcatttaat tggtctttga
    15961 tagctatgcg ttttcatagc ctcttcattt tccactatac attgtaccgt ttgccaccaa
    16021 aatagtcaat ggatttacga acattgattt gtaaggtaat tttatcgttc gcttttttaa
    16081 tctttttacg ggaatttcaa agtccattaa tagtaatacg ttaccttttt gcataaaata
    16141 aaaaccttgc gaactccaaa tctaatttga atttcacaag gtttcctcat taagccattg
    16201 cgtcgtcgta ccgcacttct aaattcacaa acttattgta ttcttttaca aaggctagtt
    16261 tcacgtcacc aactggacca ttacgttgtt tcgcaataat aatctcaatc gtgccatcat
    16321 tttcaccttc ccggtcatag taatcttccc ggtataaaaa ggctacgata tcggcatctt
    16381 gctcaatcga accagattca cgaatatctg acatcattgg gcgtttatct tgacgttgct
    16441 ctacactacg agataactgc gaaagtgcaa taaccggcac ttcaagttct cgcgccaaag
    16501 cttttaacga ccgagaaatt tcagaaactt cttgttgtct attttcgcca ccacgaccgc
    16561 tccctgcaat cagttgcaag taatcaatca caatcatacc aagaccagtt tcttgtttta
    16621 aacggcgaca tttggaacga atttcattca cccgaacacc cggcgtatca tcaatatata
    16681 tccccgaatt agaaagtgta cccatcgcga ttgtcagctt ttgccaatca tcgctcgtta
    16741 aagcacccgt ccgtaaattc tgcgcattaa tatttccttc cgcacaaagc atccgcataa
    16801 caagttgttc cgcacccatt tccaaactaa aaatggccac attctcgtcg gttttcgttg
    16861 caacattttg cgcaatgttt agggcgaatg ctgttttacc aacagaagga cgcgcggcaa
    16921 caataattaa atcattccgc tgaaatccag ctgtcatttt atccagctcg ttaaatccag
    16981 ttggaatccc agtaatatca cctttgcgat tatgcaaaat ttcaatatca tcataagttt
    17041 taactaggac atctttaata ttcttgaatg caccaacatt tttacgttgc gaaacttcca
    17101 agatactctt ttccgcttcg tccataagca tatcgagctc gtcttcgcgc gaatatccat
    17161 ctgttgcaat ttgggtagca gttctaatta aacgtcttag aagcgccttg tcctcgataa
    17221 tatgggcata gtattccaag ttagccgcag tcggtacagc accggataat tccgtcaaat
    17281 aaggcaaacc gcccgcatct tctaaattac ccttggcagc aagcgcctca tatactgtta
    17341 aaacatcgac agccttcccg tggtcgttca aatcaagcat cgtttcgaaa atgatttggt
    17401 gaccagttcg ataaaaatca tccggcatta aaatttcaga agcagtaatc agcgcatttg
    17461 gctcaagaaa tatcgcgccc agtacagctt gttcggcttc aatattttgt ggtggtgttc
    17521 tgtcctggaa attattatcc actgtcttac gctcccttaa gaaaaattat tcttcactca
    17581 catgtacatc aagtgttgcc gttacttcat ggtgcaactt caccggcacc ttcgtatgcc
    17641 ctaaagctcg aattgcctct ggtagatcca ttttacgttt atctatttta ataccatgtg
    17701 ttttttcaag cgtttgagca atttgtttag atgtaataga accaaacaat ctgccgcctt
    17761 caccagactt cgcttttaat tccactgtta aattttccat tttttctttc aaagcttttg
    17821 cttcagctag ttcttcagca gctaatttat cttctttttt cttttgcgct gaaagagtgc
    17881 ttaaagccgc attattagcc tcaactgcgt aaccattttt aattaaaaaa ttgtttgcat
    17941 aaccatcagc aacattttta gtttcacctt ttttaccttt accttttacg tctttcaaga
    18001 aaataacttt cataattatg tttctccctt ccaatacgca tcaatggcgc taattaattg
    18061 tttttctgct tctgcaattg taacatcttt aagctgtgtg gctgcattcg ataaatgtcc
    18121 gccaccgcct agtttttcca taatgacttg cacattgatt tgaccaagcg atctcgcgct
    18181 aatcccgatt aatttatccg gacgtagcgt aataacaaag gatgcctgca cgccttccat
    18241 cgaaagcatc gtatctgccg cctgcgcagc tataactgtg ccaaattcct cgtcttcatg
    18301 tccagtcgca atcgccatac catcatgata aatttcaagc gactcaacta aacgactccg
    18361 ctgagtaaaa gtagtaatat cttccttcaa aaattgctga accaaaatcg tgtccgcacc
    18421 aagcgaccgt aaatagctcg ccgcatcgaa cgttcgcgac ccagtccgta gcgtaaagtt
    18481 cttcgtatca accacaatcc cggaaagaag cgccgttgcc tcgattttcc caacctgctc
    18541 taaatccggt tgatactcaa acagctccgt aatcaattcg gcagtagatg acgcatatgg
    18601 ttcgatataa acaagcaccg ggcttccaac aaattcctct gaacgacgat ggtgatcgac
    18661 aaccaccaca ttcgtagccg agtcaagcaa ttccttatta ataaccatcg aaggtttgtg
    18721 cgtatcaaca accacaagca aactcttctc cgtgatattt tctagcgcga cttgcggtgt
    18781 aactatattt ttaatcacat ttggatattc ttcaatttca ttcattaatc gcttcacatc
    18841 tggactcatt ttgccaggtt ccacgaccac ataagcattc cgatcattca tctccgcaat
    18901 ccgcatcact ccaagactcg aaccaattac gtccatatcc ggatagcggt gccccataac
    18961 aaaaacttgg tcactttgcg taatcaactc ttgcaaggct tgcgagataa cacgtgcgcg
    19021 aacacgagtc cgtttttcca tcggatttgt tttcccgcca taaaaacgca cttttccttc
    19081 aggttgctta attacgacct gatctccgcc gcgccctaaa gcaaggtcca gactagactg
    19141 tgccaaatcg gccagctgaa tcaaatcatc ttccttataa ccaatcccaa tactaagcgt
    19201 taatggaata ttttgcttcg acgtccgttc gcgaatccgg tccaagattt gaaacttctc
    19261 ttcctccaac cgcttcaaca tttcctccgt caaaaaggcc ataaagcggt ctgtcgaaat
    19321 ccgtttcaaa taaatacgat gttctctggc ccagttagtc aacatcgacg tcaccaaatt
    19381 atttaaagca ctgcgacgtc tatcatccat gccctgcgcc cattcatcat aattatctaa
    19441 gaaaataacc gcaaaaacag atttattcgc ctgaaacttc ttatttaaat cataatattc
    19501 tgttcggtca tataaataca aaatccgttc cttacgcttt actatcgtat caaaacggtg
    19561 atcacgccaa gcaatcgaca taatcccctt ctcatcattc ccagtaataa cgtccaaaaa
    19621 ttcaggtcct acttcttcca aagattcccc aattagctct gccttatcaa agtatttcga
    19681 cataaacggg ttaacccatt cgattttgta atgttcatca tacagaagta ttcccatcgg
    19741 catctcaaca agcgcttctt cttcactacg cttaatccga tacgttaaat tagaaacata
    19801 tagttgcaca tcttcattca agcgatattc aaaataaaac atcgcaaccg taagaataat
    19861 tccgccaaca acaactaacg ccgatagcca ccacgaaaaa aagaacgtga ttacgctcaa
    19921 aataattgtc gctgcaatca gaccgtatag tggatattta agcattcgtt tttgaaaata
    19981 gcctgacatt tcatccagct ccccattttt ttacatacct tttgtctgaa tttgagtatc
    20041 tatatcataa cataaactta actaacaatt catcactatt attttaccta tatttaccca
    20101 tttcatcaaa tccaaacttg ccactgtaca aaaaaagcga cctttaaggc cacttttata
    20161 aactcaagct tttaattaat ttcgatgatg cgtaacaatt ttcaccgtta gacatcttca
    20221 ccacaccttt tgtcgtatcc agctcatgaa tatttttctt attcacaata tacgacctgt
    20281 ggcaccgata aaatgattcg tccaacattt tctcgatatt cttcaactta ccataaaatt
    20341 ccacttggcg atttttgcca tgtaaaatta ctttatgaat agttggggct gtttcaaaaa
    20401 ataagatatc gtctaaaagt tcatgaataa tcttcttatc cgacacttta aacgtaaaat
    20461 acttctgcat atcttgatca ttggaaatcc gttcttctgc ttgcttcata caggcaagta
    20521 cccggtcatg cagcaaatca atatcgtctt taataatgta atcaagcgct tccaccttat
    20581 acgtgaaagt catataactt aactccgcat gtgttgtaat aaaaataatg aaaccacgcg
    20641 gatcaaactt ccgaatttcc tgagctaatt caaaaccatt catgtccggc tgccctaaat
    20701 caatatctaa aaaataaagc cccatacctt gatgtgtagg cattcgtgat actaactcaa
    20761 acggatctcc tgttgaaagt tctaacttca tatcaaaatg ttcaaccata atatagtctt
    20821 caatatattt cgttaacctt tctcgctgca ttctgttatc ttcacaaata aaaaccggta
    20881 gcataaattc atccccattc ttctacataa tttctaattc ttgaataact tctctatcgg
    20941 tcactttcgt atctaaggca acgtgcgaat atttcttcat aatttcccgc aaactagcaa
    21001 ggcctaatcc acgaccctct ccttttgtag agaaaccttc ttcaaatatt ttataaatcg
    21061 gtggcatatt tactggtaaa ctattcgcaa atacaataat tatactatca ccttttttca
    21121 caaaagcgat tcgaataact ggattttcac aagttagcgc tgcttcaacc gcattatcta
    21181 gcaaaatccc gacaacttta cacaaatcta tgctatccat cgaaatctta tcaatcggtt
    21241 caactacttc taaaattgca tcaattttca actcttgagc tcgtattaat ttaacagcta
    21301 gcaaaccctt tagttcaatc acatgaatat tttgaagcaa agaaatctta tagttgttag
    21361 attcaattgt tttatttata ggtacaatat tattttcaaa gtaatacttc aaacccggca
    21421 tatcattatt atcaatatat ccaacaagtg ttgacaggat attcacataa tcatgacgaa
    21481 aaacgcgcat ttctctatgc agggactcta atgtagtaac ataatcctgt aactgttcta
    21541 gctgctcctt ctgattctgt actttaagtt cgttggttgc tgtattaata acaaccgtca
    21601 ctataactat taacaaaatg gtgtaccctg taaaaataag ggtattaatc ttcaaaactg
    21661 atccatcgaa tcccgctatt gatcccgcat aaatgttcat atagaatgct aagacagtaa
    21721 gagcaacgat agaaaaaata atatatgcat attttctatg ttctacaaat ctaga
//
LOCUS       DASDYK010000039        21259 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.039, whole genome shotgun sequence.
ACCESSION   DASDYK010000039 DASDYK010000000
VERSION     DASDYK010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 21259)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21259)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21259
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.039"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            290..1186
                     /locus_tag="U0308_001439"
     CDS             290..1186
                     /locus_tag="U0308_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rgg family transcriptional regulator"
                     /protein_id="HEM2316406.1"
                     /translation="MVGYGKTVRDIRTSKGIHQKDLYDNIISKSFAIEFEKGKHDITL
                     TLFEKILKRMNMDLDEFFYIHRELSVSAEKNYLCMNQERGNIYDLASLELLYSELSKH
                     NGELVEVWKAFVRSRIKLVEHLFKYHEFTVDVITPKDKCTIQKYLFSIDTWTLEELKI
                     CANSIYFFEEDLQIQFLNQVIKAIHSYKNYDRARRVLCTLLINTIEMFISRGQIASAS
                     KLIILLDSLCLYNESAFYRNISHFLKGLVKMQNNHIQEGYNQAKKAIQIMNDLRFEEI
                     AYLYEILLDQFIRIKGIDIVKS"
     gene            complement(1183..1812)
                     /locus_tag="U0308_001440"
     CDS             complement(1183..1812)
                     /locus_tag="U0308_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HEM2316407.1"
                     /translation="MNVNEQKVLVLNNLVEHYGYQDWWEADNRLADWLSMILIQRTTE
                     KNAKQALANLAPYLDLDSLIEMDKAKLEELIYPAGFYKQKSIYIKALAEWFYGHGASL
                     DKFQTYSTEALRKELLGIKGVGEETADAMLLYIFERNVFIADLYARRLFTRLGFGEYT
                     TYEQMREEFMPIIENIPHKLCKEWHSVIDVHGKHFGKDKSMNESWLLES"
     gene            complement(1855..2271)
                     /locus_tag="U0308_001441"
     CDS             complement(1855..2271)
                     /locus_tag="U0308_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316408.1"
                     /translation="MSIIARELTKAEEAEIIRLKEEGEVMLQTDGTPEERIEKIAEYL
                     KQTSPDPDLAEELGYILGSLYGEAVREKYEWRWLFVSENDLEGYAITSKEHGYTFMVH
                     DYFMQVIVQNKPDNSKMLFELMVDMTGNRNDFRMIG"
     gene            2391..2954
                     /locus_tag="U0308_001442"
     CDS             2391..2954
                     /locus_tag="U0308_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF420 domain-containing protein"
                     /protein_id="HEM2316409.1"
                     /translation="MEQNKEKLTKPTSEKNYFWPIMIISFVAVVVILLLFFSPIGYQG
                     AVHFDITIFPRMNAIFNSFTFVFLVIALWAIIKKKNIKMHRGFILAAFTSTLFFLVTY
                     LTFHYLSAETSTFGGTGIIRPIYFFILITHSFLAAIVVPLALFALVWGWTMQIEKHKK
                     IVRWTMPIWLYVSLTGVLVYLFMAPYY"
     gene            complement(3000..3707)
                     /locus_tag="U0308_001443"
     CDS             complement(3000..3707)
                     /locus_tag="U0308_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HEM2316410.1"
                     /translation="MKPIFAVGDVHGEITLLDELLENWDKEQERLLFVGDLIDRGENP
                     AAVLRRVKALADQTGAIVLKGNHEQMLLDFLENPSGKMHYYLSQGGMETIQSLIADSL
                     DKKMTPEGLAERVKEEAAELIDFIRNLPLYYEEGKYVFVHAGVDLTKKDWHDTEERDF
                     FWIREPFLFGQNKTGKVFIFGHTPVQNLHIDESSGIWVSEDKTRLDIDGGAVFGGELH
                     GIVVEEKVITKSFSVKK"
     gene            complement(3775..3984)
                     /locus_tag="U0308_001444"
     CDS             complement(3775..3984)
                     /locus_tag="U0308_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316411.1"
                     /translation="MAHENLRELEDQLIELRQTYQEVISETREFEDPQLQNGPINAAE
                     VRLSALRHEIAEVEKKIKKAESKTE"
     gene            4175..5167
                     /locus_tag="U0308_001445"
     CDS             4175..5167
                     /locus_tag="U0308_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF975 family protein"
                     /protein_id="HEM2316412.1"
                     /translation="MTISQVKQTAKESLRGNWGIAIGIFVLAWLIETVGGGLIGWIPV
                     IGWIAIFLLTGPLYTGVAWVYLAISRREQPDVAYMFSGFKQFGRTVLAYLLISIFTFL
                     WSLLLIVPGIIKTYSYSQTFFILRDNPNISALDAITESRHMMNGHKGRLFGLSLTFLL
                     WYLIPLAVAIAGTVIVAGGMATTSYTADPAEVLSALAAGATFGGLVLILASWLITLGI
                     SLYVYPYLITSIAVFYDDLYAATEGTFTEETVIVEEEVNPFGTTEADPFAEDTHPEGF
                     GPEATKEPETPVVPEAPEAPETPETPEVPETPEAPETPEAPETPEAPKDNNEPK"
     gene            5154..5690
                     /locus_tag="U0308_001446"
     CDS             5154..5690
                     /locus_tag="U0308_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2316413.1"
                     /translation="MNQNKITAGGLEFLVRFALPTDRLKIHDLMMDTARWLKESGSTQ
                     WSDILHGFDVHNIEQRIELGEVALFETEAGALAGAMIIRKTPSDWDTDLWEDLAIDKA
                     YYLHRIMVSRAFSGISLSKQMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQ
                     FSGKKNGFYLYQKELSQK"
     gene            complement(5700..6347)
                     /locus_tag="U0308_001447"
     CDS             complement(5700..6347)
                     /locus_tag="U0308_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2316414.1"
                     /translation="MANKFKTLDKMVYNLLLEKIKNGELVANEHLAEEKLAREFGVSR
                     SPIRKAIATLTAQGIVSYHENSGAVLNDCIVDSDRYVQLMETIEIFVDAAIAKAAHFG
                     YEMDLEKLYARMQEMERLSYLTDIENYYDAHHRFILCLISFAENPYQVRIVKQIFFQM
                     IHFSDGINMFKSVEIREWTNKKSNQICELLAEEETELARKTIKSMFAELTIQAYR"
     gene            complement(6393..9083)
                     /locus_tag="U0308_001448"
     CDS             complement(6393..9083)
                     /locus_tag="U0308_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HEM2316415.1"
                     /translation="MRKVYEIFILDWRRLFKAPLALLLVIALIILPSLYAWFNIEALW
                     DPYSNTSGIKVAVSIDDEGAEIDVPGKKPQQVNVGDQLKKTLEKNKKLGWTFVSEDEA
                     KKGVKSGKYYASIHIPKDFSEDMVSVVNDNVTKPTIDYSVNEKINAIAPKMTESGATT
                     IVNQISSEFVGTVSKAVLEEFNKAGIDLENELPTIRRLKTKVFQVQDALPELKKMGAE
                     AVKIEAKLPELKAKANQVVELNEKIPELNKATENVLLVEQQLPKIDQLGQDILVLQKK
                     IPEIKQIAESVKEVDENFGTIKKTVNDAVNESGKALDVIDTAMAAIPTVEKIAQNGSG
                     YVDKVSDFADEINKSFDTLAPAIKQNLTLMKQMADNIYQVTEAIKNGSITPEQAITEL
                     KKMEQDIDSLQQMITKQTATLESLNETLPNKPFTDLIANLKTINSQLGAQKETITKVR
                     TELEDGAQPSEELLNQLNEQAKKVSAKLDQILANYDSEIVPAIKVGLNQIQGDLKDSQ
                     KLLETLQAKIPEITQVLKDSRETLQTGQTYLKEFQERLPEIQKTLDEATKVINTKLDT
                     IIAGINEAANFYQNDYPNVKANIKKAANFIRDDLPGLEKEINQASNLIQEKMPEFEKA
                     IKIAADLSREELPEFEKAINNAANKITDFDKNYDLQSIIKMLRNDADKDSSFIANPVK
                     LKETSYYPIPNYGSASSPFYTALCLWVGALLLISLLRVDVEVPAGIFSHYHRYFGRLL
                     TFLSIGLMQALIVTLGNIFLLGVSIAEPLLHVLFSMFISVVFMTIVYTLVSLFNNVGK
                     GIAIILLVLQISGAGGNFPIQVSPPFFQAIYPFLPFTYAVSLIRESVGGLYMPTVWID
                     MSVLAGFAILFITLGILLKKPLDKVVPKLSEKAKRSKLIH"
     gene            complement(9126..9767)
                     /locus_tag="U0308_001449"
     CDS             complement(9126..9767)
                     /locus_tag="U0308_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2316416.1"
                     /translation="MEKQTYEKLAYYTIKEKILSGKLHVGQHISEAGIAKELSISRTP
                     VRKAIAVLVSEELIEYELNRGAIVIESSMSAGRFIELLEMAEILVVQTIEKCKNKNLT
                     YKPEQGNALLEEMREIQKEEDVEAYLSLLSKWLLQFVAQLANSYAEDIVRKMKRDFFN
                     KAQKDIKMIPVLLEEETMETLEQLTYYMVEKKHDLAKEVIQKLVNLYIIRTFR"
     gene            complement(9791..10741)
                     /locus_tag="U0308_001450"
     CDS             complement(9791..10741)
                     /locus_tag="U0308_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEM2316417.1"
                     /translation="MIEFFKTTNEKMEQISALEDGCWVKVTAPTDDEIEMLSKEMDVP
                     KPYILDALDSEERSRIELKRAEQDVRHSLVIVDYPYESEDELGYAMYETLPIGIVLTR
                     KHLVTITLRDLPILKDVQSMKLEEYDTTNHKQFLLKLLYAVSYYYLKYLNQIIKQTNN
                     LEIQIKQSMKNEQLYAFMAVQKSLVFFATALQSNKAILDKMEDVEHFMQQEDNHDLLR
                     DVIIENKQAIAMTDTYTQIISGMSDVFSSVISNNLNIVMKFLTSFTIILSLPTIVASI
                     YGMNIKLPFMHNEHAFALILLFTLLITTGVTVIFWRRKYF"
     gene            10839..11123
                     /locus_tag="U0308_001451"
     CDS             10839..11123
                     /locus_tag="U0308_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316418.1"
                     /translation="MEFMSMIVTGIVLAAIISGLSFVVGKLSGLSWFWIAFCANSGFF
                     IIFITVQNSFPDNAAVALSYLNLGIGVVLIALTLFQSSNWLFKKTMQRKH"
     gene            complement(11206..12045)
                     /locus_tag="U0308_001452"
     CDS             complement(11206..12045)
                     /locus_tag="U0308_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2316419.1"
                     /translation="MAEISEELRLGEVVLNVGHLKEMADFYQEVIGLKLLEENERMVR
                     LGVSGSDEALLVLKKIDNAVVPEVPRIGLFHTAFLLPTRESLADVLLHLAKSGYPIDG
                     AGDHAYSEALYLHDIEGNGIEIYADRPKAEWMHDGDGNLPMVTEQVDVDSLLQIATDE
                     PFTGMPNGTIIGHVHLQVADADKAEQFYKEVLGMNLTTAIPSARFFAAGDYHHHIGSN
                     VWAGRNLELLQENETGLAWFTIITPDKDAIITNLIEQGYDVKRLENTISVTDSNGIKI
                     HFK"
     gene            complement(12135..13526)
                     /locus_tag="U0308_001453"
     CDS             complement(12135..13526)
                     /locus_tag="U0308_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEM2316420.1"
                     /translation="MNSLFRRKPIEDLMHNKSGSTHLKQTLGPLDLTLLGVGAIVGTG
                     IFILPGTVAAKNAGPAIIFSFVIAAIVCAIAAMCYSEFASSVPVAGSAYTYGYVVFGE
                     LIGWLLGWALILEYGLAVASVASGWSSYLNALLSGFHISIPEAISGPFNPEVGTFINL
                     PAIIIVLVIAFLLTLGIKESTRVNTIMVVIKVGVILLFLVVGVFYVKPDNWQPFMPFG
                     ISGVMNGAALVFFAYLGFDAVSSAAEEVKDPQRTMPIGIIGSLLICTVLYVAVSAVLT
                     GMVPYTDLNVTDPVAYALQVINQDWVAGIVSLGAVVGMITVILVMSYGATRLIFAMGR
                     DGLLPKVLAEINQKYQTPVKNTWIFAVIVAIISGLVPLDRLAELVNIGTLLAFMMVSI
                     GIIFLRKNKDIQARGFKVPFYPVLPIVSFLLCAFLISRLSVHTWILCGIWFVIGLIVY
                     FAYGRKHSELLKK"
     gene            13761..15581
                     /gene="ltaP"
                     /locus_tag="U0308_001454"
     CDS             13761..15581
                     /gene="ltaP"
                     /locus_tag="U0308_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoteichoic acid primase LtaP"
                     /protein_id="HEM2316421.1"
                     /translation="MILFYFLLIIGKFTFAYFQIFKDPNFLALGMDLLFIVLLLGLIH
                     LFAPVRSHIYWYAGMSLFIGILMLVCVLYARFYNEVPTYHSFSLIGEVGVVKNSATSL
                     LSGTDWLYILDIVLLPFILYFHIKKGHEFPSFRITSRVYGVSFISTLLVLSGFTYFMM
                     QQNIISDSKRAKRMGIFTFNISTALTGADHVKAADITAKNVNDIKGVSVKSNPDYFGA
                     AKGKNLIIVQLESFQRNLTNVKINGQSITPTLDSLQNETMYSNQFFQTVSKSNTADAE
                     WSVYTSTFPSGYYTNTQTYGDRVIPSMPRLLGKNDYKTATFHTNDASFYNRDEFYPAV
                     GFDKFYDRKFFGDEDVIGFSPSDEVLYNKAFPILEEQYKNNQKFYAQLISVSSHMPFD
                     IPKDKQEIDLPSDLKDTELGNYFEAVHYADKQLGEFIQKLKDSGIWDDSVVVFYGDHH
                     IIKTDQLPEEQKKYVNRSTELKADPADDYRIPFFLHYPGMENPGEIKNVGGEIDIMPT
                     VMNLLGIKTGDQIMFGTDILNSSNNYVPERYTMPEGSYFTNSYMYQPDESFETGAATN
                     YDGTNKELSSDVKKRFDASRKLLQYSDSYVNNLPLRDEDK"
     gene            complement(15624..16274)
                     /locus_tag="U0308_001455"
     CDS             complement(15624..16274)
                     /locus_tag="U0308_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TalA family protein"
                     /protein_id="HEM2316422.1"
                     /translation="MFLDTGNLEEIKKALQFPFFEGVTTNPTILLKENKPRNTHIANI
                     PAKVVFVQAAGLTEEEIWEDVLRIQAIEPAEGTVIGLKIPAHEAGIKVIAKVRANFPN
                     EIILATAIFSSEQGYIAALSGADYLAPYYNRMEVSGLDAAKTIEELRYVLDLQGLEDV
                     KIMGASFKNSRQIMQALASGADTVTIGYDLFLQMMNKPLALESIEKFNEHQAALPK"
     gene            complement(16414..17142)
                     /locus_tag="U0308_001456"
     CDS             complement(16414..17142)
                     /locus_tag="U0308_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316423.1"
                     /translation="MKKINWTQWIALFVFASMGISVVFTIYEIFTAPIKQPATGPHVT
                     LRGDYIFLLFEIILGIFILLLPSIIARRFKFEIPGLVYILFIVFLYGSIYLGTVQKFY
                     STVPHWDKILHTFSGAMLGAIGFSFVSLLNANNKVVMKLKPGFIAVFAFCFAVTMGAF
                     WEVYEYTFDGIMNLNMQRYNLSNGTPLTGRAALEDTMTDIIVDIIGALFIVIVGYFAL
                     KKGRPWMERFEFKRKNWKKEPKKK"
     gene            complement(17237..19117)
                     /locus_tag="U0308_001457"
     CDS             complement(17237..19117)
                     /locus_tag="U0308_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEM2316424.1"
                     /translation="MKEWMKQNWQFITTGISGILIVIGCLVGSDVGDFWTAVIFLSAF
                     VIGGFEQAKEGIQATIKTKKLNVELLMILAATGASIIGYWFEGAILIFIFSVSGALET
                     YTTNKSKREITKLMAFQPERAFRLLPNGDLEEVAAKELQLDDMVFVRPGESVPIDGVI
                     VRGSTTLNEAAINGESVPATKTVGADVFGGTVNVSSAITVKVTQTFDNTIFSKIIRLV
                     ESAQSEPSKTARFIERFEDAYVKAVLLFVLVMMFLPHFALGWSWNETFYRAMVLLTVA
                     SPCALVASVTPATLAAISNGARHGILFKGGVHLENLRGVKAVAFDKTGTLTNGTPELT
                     DRLFAENVDKQQVINVVGAMERQSLHPLAAAITQDLEAEITEKLTEIEVTDVAGWGVQ
                     AIYQEGNWKVGKAGFVGEEAAAAFSNGAFERLAGEGKTIVYVAKDGVIQAMFALKDTC
                     RPEAIRTIKALQAKGIKTIMVTGDNEQTGAAIQAELGMDYVVSGCLPEKKVDVLKELS
                     VTYGSVAMVGDGINDAPALAHAAVGIAMGEGTDIAMETADVVLMKNDLEKIPYAYNLS
                     ERLHWITWQNICFAIAVILVLITANVFQLINLPFGVVGHEGSTILVILNGLRLLRSNR
                     KK"
     gene            complement(19383..20300)
                     /locus_tag="U0308_001458"
     CDS             complement(19383..20300)
                     /locus_tag="U0308_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HEM2316425.1"
                     /translation="MKRITIGNSALTASEISLGCMRMADLSKEDANKVINTALENGID
                     FFDHADIYGGGKSEEVFADAIDMNATIREKMILQSKCGIRQGFFDFSKEHIIASVEGS
                     LKRLKTDYLDTLLLHRPDTLFEPEEVAAAFTELEKSGKVRHFGVSNQNPGQIELLKKY
                     VDQELIANQLQFSIMHTGMIDTGFNVNMTIDPSLDRDGGILEYSRLNNMTIQAWSPFQ
                     YGFFEGVFLDNDKFPELNKVIDKIAADKGVTNSAIAVAWIQRHPASFQTVVGTMNPGR
                     IADIAKASDVTLSREEWYEIYRAAGNQLP"
     gene            complement(20364..20897)
                     /locus_tag="U0308_001459"
     CDS             complement(20364..20897)
                     /locus_tag="U0308_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HEM2316426.1"
                     /translation="MERKLIQEINLLENKKLVMNLNIVAIAIVLILTVLGIVFSGGFA
                     ITNGFMGIIWMFGGYAVAIVIHEAVHGIFFKAFRPEAKVKFGFKNGMAYAGSPGAFYT
                     KAQFFIISIAPFIVLTGLFIFLRFLGVNEAVLYLIFALHTSGCVGDFYYCILLINQPA
                     GIVVEDTDKGINFYSEG"
BASE COUNT         6408 a         4534 c         3447 g         6870 t
ORIGIN      
        1 cgatataaag caaccaaact ttttttgaaa ttctcgtcat attttgcttt agccataaaa
       61 cttccttctt tctattgtta aatatcataa aaaaagatgc aaatatatct gttatttcat
      121 ttctaatata tcaagttttc ctaacatttt ttcataaagt cctaaaaata ggacttcttc
      181 cgccaaattt tctatgctac gatttaaaag taaaatggct gttaaactcc ttgcaacacc
      241 tcttagatgc agcccacatc taaattatga aacaaaagga gtaacttgaa tggtcgggta
      301 tggaaaaaca gtgagagata ttcgcacttc taaaggaata catcaaaaag atttatacga
      361 taatatcatt tccaaatcct tcgctatcga atttgaaaaa ggaaagcacg acatcacact
      421 aaccttattt gaaaaaattt taaaacggat gaatatggac ttggacgagt tcttttatat
      481 ccatagagaa ttgtcagtat cagctgagaa aaattattta tgcatgaatc aagaacgcgg
      541 aaatatatat gatcttgcaa gtttggaact attatatagc gagctttcta aacataatgg
      601 cgaattagtg gaggtctgga aagcatttgt tcgttcgcga attaaattgg tcgaacatct
      661 ctttaaatat catgaattta cagtagacgt gattacacct aaagataaat gcacgattca
      721 aaagtattta ttttcgattg atacgtggac acttgaagaa cttaagattt gcgctaactc
      781 catctacttt tttgaagaag atttacaaat tcaattttta aaccaggtca ttaaggccat
      841 tcactcttat aaaaactacg accgtgccag acgtgtttta tgtacgcttt taattaatac
      901 gattgaaatg tttatttcgc gcggtcaaat agcttctgct agtaaactca tcatcctatt
      961 agactcttta tgtctgtata acgaaagcgc cttttaccga aatatctctc attttttaaa
     1021 agggttagta aaaatgcaaa ataatcatat ccaagaagga tacaatcaag caaaaaaagc
     1081 cattcaaatt atgaatgacc tccgttttga agagattgct tatttatatg aaattttgtt
     1141 ggatcagttt atcaggataa aaggtataga tattgttaag agctagcttt ctagcagcca
     1201 agattcattc atacttttgt ctttcccaaa atgttttccg tgaacatcaa tgactgagtg
     1261 ccattcttta caaagtttat gtggaatatt ttcgattatc ggcatgaatt cctcgcgcat
     1321 ttgttcataa gttgtatatt caccaaaacc caacctagta aatagtcgtc tggcatataa
     1381 atcagctata aacacattcc gctcaaaaat atacagcaac attgcatccg ccgtttcttc
     1441 cccgacaccc tttatgccta acaactcttt tcgtaaagct tccgttgaat acgtctgaaa
     1501 cttatctaaa ctagctccgt gaccatagaa ccactcagca agtgctttaa tatagatact
     1561 tttttgttta taaaaacccg ctggatagat taattcttcc aatttcgctt tatccatttc
     1621 aattaagcta tctaaatcta aatatggtgc aaggttcgct aatgcttgtt tggcattttt
     1681 ctctgtcgta cgctggatta atatcatcga aagccaatca gccagacgat tatccgcttc
     1741 ccaccaatct tgataaccat aatgctccac taaattattt aaaactaaca ctttttgttc
     1801 gtttacattc accttgcatc acctcaaaaa ggaatcaaaa aacagttatt ctccttaacc
     1861 aatcatccga aaatcgtttc gattcccagt catatcaacc atcaattcaa atagcatttt
     1921 gctattatct ggcttattct gaacgattac ttgcataaaa taatcatgca ccataaatgt
     1981 atagccatgc tctttcgacg taatcgcgta gccttctaaa tcattttctg agacaaacag
     2041 ccagcgccac tcatactttt cacgcactgc ctctccgtac aaagagccta aaatataacc
     2101 aagctcttct gctaaatcag ggtctggcga ggtttgtttt aagtactcag caattttctc
     2161 gatgcgttct tctggagttc cgtctgtttg gagcatcact tcgccttctt cttttaaacg
     2221 gataatttca gcttcttccg ctttcgttag ttctcgtgca ataatcgaca ttagaaacac
     2281 cctttcccca cccattataa ctcaaaagct caatctttcg catccgatat gttcgtcatg
     2341 tataatgaaa gaagtacagc aatttttata tttagggggc tatttttttc atggaacaaa
     2401 ataaagaaaa actcacaaaa ccgacatcag aaaaaaacta tttttggccg ataatgatta
     2461 tttcatttgt cgcggttgtg gtgattttac tactcttctt ctcaccaatc gggtatcaag
     2521 gagcagtgca tttcgacatt actatcttcc cgcgaatgaa cgccatcttt aatagtttta
     2581 cctttgtatt tttagttatt gcactttggg cgattataaa aaagaaaaac attaaaatgc
     2641 accgtggctt cattttagca gcatttacat ctacattatt cttcttagta acttacttaa
     2701 cattccatta tctttcagca gaaacttcta catttggcgg aactggaatt atccgtccta
     2761 tctacttctt cattttaatt acacatagtt tcttagcagc aatcgttgtt ccactagcgc
     2821 tatttgcact tgtttggggc tggacgatgc aaattgagaa acacaaaaaa atcgttcgct
     2881 ggacgatgcc gatttggcta tatgtcagct taactggcgt actcgtttac ttatttatgg
     2941 caccgtatta ttaaacaaaa aagcatcgaa tgagcgcttc aaaagagccc attcgatgct
     3001 tattttttta cagaaaaact tttcgtgatg actttttctt ccacgacaat cccgtgaagt
     3061 tctccgccaa aaaccgcgcc accatctata tcgagcctcg ttttatcttc cgaaacccaa
     3121 ataccagaac tttcatcaat atgtaaattt tgtaccgggg tatgcccgaa aataaagact
     3181 ttcccggttt tattctgtcc aaataagaaa ggttcgcgaa tccagaaaaa atcacgctcc
     3241 tcggtatcgt gccaatcttt tttcgtcaaa tctacgcctg catgtacaaa tacatatttg
     3301 ccttcttcat aatagagtgg caagttccgg atgaaatcaa tgagttcagc agcttcttct
     3361 tttacccgtt ccgcaagtcc ctccggcgtc atttttttgt caagcgagtc cgcgattaag
     3421 gattgaattg tttccatacc gccttgactt aaataataat gcattttccc agaagggttt
     3481 tcgagaaaat ctagtaacat ttgttcgtga tttcctttta agacaatcgc tcccgtttgg
     3541 tcggctaatg ctttcactct tctaagtact gcagctgggt tttcgccgcg gtcaatcaaa
     3601 tcccctacaa acaaaagccg ttcttgctct ttatcccagt tttcgagtaa ttcatctaaa
     3661 agcgtaatct ctccgtgtac atctcctaca gcaaaaattg gcttcatgct tatacctcca
     3721 gatctacgta aaagaaacgc ccctctgcaa aataaacaaa tggacgcttt tttcttattc
     3781 ggttttgctt tctgcttttt tgattttctt ctctacttcg gcaatttcgt gacgtaatgc
     3841 acttaatcta acctcagctg cattgattgg tccattttgg agttgtgggt cttcaaactc
     3901 tcgtgtttca ctgattacct cttgatatgt ttgtcgcaat tcaatcaatt gatcttctag
     3961 ttctcttaaa ttctcatggg ccatacgcgc cacctccaaa ttaatcatac tacacaattt
     4021 tacttttccc cattaaatag aaatataatc ctttttttag catttttttg taacacttct
     4081 tattactgta ttagtcctag aaaatgtgct attttaaagg taggtatttt tgctattata
     4141 cttaaaaata aatgaaaaag gagtttttac tatgatgact atttcacaag taaaacagac
     4201 agcaaaagag tcgcttcgtg gcaactgggg aattgccatt ggaatatttg tacttgcttg
     4261 gctaatcgaa actgttggtg gaggattaat tggttggatc ccagtcattg gttggattgc
     4321 aatattccta ctaactggac cactttatac tggggttgct tgggtgtacc tagcaattag
     4381 ccgccgtgaa caaccagatg ttgcttatat gtttagtggt tttaaacaat ttggacgtac
     4441 ggtcttagct tacttactaa tctctatttt cacattctta tggagcttac tcttaatcgt
     4501 accaggaatt attaaaactt actcttattc acaaacattc tttatcttac gagataaccc
     4561 aaatatttct gcgctagatg ctattacaga aagccgccac atgatgaatg gacacaaagg
     4621 tagacttttt ggactatctc ttacattcct tttatggtat ttaattcctc ttgctgttgc
     4681 gattgcaggt acggttatcg ttgctggcgg aatggctact acatcttata cagctgatcc
     4741 tgctgaagta ctttcagctc ttgctgccgg tgctacgttt ggtggactcg tgttaatctt
     4801 agcatcgtgg ttaattactc ttggtatttc gctttatgtt tatccttatc taatcacttc
     4861 tatcgctgtg ttctacgatg atttatacgc agcaacagaa ggcactttta cagaagaaac
     4921 ggtcatcgtg gaagaagaag taaatccatt tggaacaaca gaagctgatc catttgctga
     4981 agatacacat ccagaaggct tcggaccaga agcaacaaaa gaacccgaaa cgcctgtagt
     5041 accagaagct cctgaggctc ctgaaacacc agaaacgccg gaagttcctg aaactcctga
     5101 ggcacccgag actccggaag cacccgaaac accggaagct ccaaaagata acaatgaacc
     5161 aaaataaaat tacggctggc ggactggaat ttctagtccg ctttgctttg ccaactgatc
     5221 gactaaaaat acatgactta atgatggata cagctcgctg gttaaaagag tcggggtcaa
     5281 cccagtggag cgacattttg catggttttg atgtccataa tatcgaacaa cgtattgaac
     5341 ttggtgaagt tgcccttttt gaaacggaag cgggtgcact tgcgggcgca atgattattc
     5401 gaaaaacgcc aagtgattgg gatacggatt tatgggaaga tttggcaatt gataaagcat
     5461 attatttaca ccggattatg gtttctcgag cattttccgg aatttcatta agtaaacaaa
     5521 tgatttattt tgcggaaaaa ttaggtatcg aaatgtccgt tcctttcatt cggttagatt
     5581 gcatcgaaag caatgagacg ctcaatcaaa tgtatgtccg ctatggtttt caattttctg
     5641 gtaagaaaaa cggtttttat ttatatcaaa aagagctgtc acaaaagtga cagctctttt
     5701 tatctgtagg cttgaatcgt taattccgca aacatagact taattgtttt cctggctaat
     5761 tcagtttcct cttctgcgag caactcacaa atttggttac ttttcttgtt agtccattct
     5821 ctaatttcga cggatttaaa catattaatt ccatctgaaa aatgaatcat ttggaagaaa
     5881 atttgcttga cgatacggac ttgataggga ttttccgcaa aactgattaa acaaagaata
     5941 aagcgatgat gtgcatcata ataattttct atgtcagtta gatacgaaag gcgctccatc
     6001 tcttgcatac gagcatacaa tttctccaaa tccatttcat aaccgaaatg agctgctttc
     6061 gcaattgctg catcaacaaa aatttcaatg gtttccatca attgcacata gcgatccgaa
     6121 tcaacaatac aatcatttaa aacagcaccg ctattttcgt gataactaac aataccttga
     6181 gcagtaagcg ttgcaatggc ttttcttatt ggcgaccggc taacaccgaa ttccctagcc
     6241 aacttttctt ctgctaaatg ttcattcgcc actaactcgc cgtttttgat tttttcaaga
     6301 agtagattat acaccatctt atctaatgtt ttaaatttgt ttgccacaaa gtctgccccc
     6361 tcttcgctcg taattatatc acagaaaaaa tattaatgga tgagcttgct tcgttttgct
     6421 ttttctgata gcttgggtac tactttgtct agtggttttt tgagtaaaat gcctagcgtg
     6481 ataaagagaa tggcaaatcc ggcaagaaca ctcatatcga tccaaaccgt tggcatataa
     6541 agccccccaa cactttcccg aattaaacta acggcataag tgaatggcaa gaaaggataa
     6601 atagcttgga aaaatggtgg cgaaacttga attggaaagt tcccgcctgc tcctgaaatt
     6661 tgtaaaacta acaagataat cgcaatccct tttccaacat tattaaatag cgatacgagc
     6721 gtgtagacaa ttgtcatgaa caccacgctg ataaacatgc tgaatagtac atgtagtaat
     6781 ggttctgcga tggatacccc gagcaagaaa atattcccga gcgtcacgat aagcgcctgc
     6841 attaatccga tagataggaa ggtcagcaat cggccaaaat atcggtgata atggctgaaa
     6901 attcctgccg gcacttctac atccacacgt aataacgaaa tcaacaagag cgcaccgacc
     6961 cataaacaaa gagctgtata aaatggcgaa cttgccgaac cataatttgg aattggatag
     7021 tagcttgttt cttttaactt aactggattg gcaataaatg aactatcttt atctgcgtca
     7081 tttctgagca tcttaataat gctttgcaaa tcgtaatttt tatcgaaatc ggtaatttta
     7141 ttcgctgcat tattaatggc tttttcgaat tccggcaatt cttccctcga aagatcggcc
     7201 gcaattttaa tcgctttttc gaattccggc attttttctt ggatgagatt ggaggcttga
     7261 tttatttctt tttcaagccc tggtaaatca tcacgaatga agttggccgc tttttttatg
     7321 ttcgctttta cattcggata atcgttttgg taaaagttgg ctgcttcgtt aatgcctgcg
     7381 ataatcgtgt cgagcttggt gttgattact tttgtcgctt catctaacgt tttttgaatt
     7441 tctggtaagc gttcttggaa ttcttttaag tatgtttgac cggtttgtag tgtttccctc
     7501 gaatctttta aaacctgcgt aatttctggg attttcgctt gtagggtttc taatagtttc
     7561 tggctgtctt tcaaatctcc ttgaatttgg tttaagccga ctttaattgc tggaacgatt
     7621 tcagaatcat agttcgctaa aatttggtct aacttcgcgc taactttttt cgcttgttca
     7681 ttcagttgat ttaaaagttc ctcggaaggt tgagcgccat cttcaagttc tgtgcgtact
     7741 tttgtaatcg tttctttttg cgcgcctaac tggctattaa tcgtttttaa attcgcaatt
     7801 aaatcagtaa atggcttatt cggcaatgtt tcatttaaac tttctaatgt cgctgtttgt
     7861 ttcgtaatca tttgctgcaa ggaatcaata tcttgctcca tttttttcaa ttccgtaata
     7921 gcttgttctg gcgtgattga gccattcttg attgcttctg tcacttgata gatgttgtcc
     7981 gccatttgct tcattagcgt taagttttgt ttaatagcag gcgctaacgt atcaaaggac
     8041 ttattgattt catccgcaaa atcagatact ttatccacat agccgctgcc attttgagca
     8101 attttttcta ccgttggaat tgccgccatt gctgtatcaa tcacatcaag cgctttgccc
     8161 gattcattca ctgcgtcatt gaccgttttc ttaatcgttc cgaagttttc atctacttct
     8221 tttaccgatt cggcgatttg tttgatttcc gggattttct tttggagcac taaaatatct
     8281 tgcccgagtt ggtcaatttt tggtagttgt tgttccacta ataagacgtt ttctgttgct
     8341 ttatttagtt caggaatttt ttcatttagc tcgacaactt ggtttgcttt ggcttttagt
     8401 tcgggtagtt tggcttctat tttgaccgct tctgctccca tttttttcag ttctggtaaa
     8461 gcatcctgca cttggaatac cttggttttt aggcgacgaa ttgttggcaa ttcattttca
     8521 agatcaatcc ccgctttatt aaactcttcc aaaacggctt tactaactgt gccgacaaac
     8581 tcagaactaa tttgatttac aatcgtcgtt gcgccactct cggtcatttt tggcgcgata
     8641 gcattgattt tttcattgac ggaataatcg attgtcggtt tggtaacatt atcatttacg
     8701 accgaaacca tatcttctga aaaatctttt ggaatatgaa tagacgcgta gtatttccca
     8761 cttttcacgc cttttttcgc ttcatcctca cttacaaaag tccaaccgag ttttttattt
     8821 ttttctaacg ttttcttgag ctggtccccg acgttcactt gttgcggctt tttccctggt
     8881 acgtctattt ccgcgccttc atcatctatc gaaactgcca ctttgatccc cgaagtgttg
     8941 gaatacggat cccaaagtgc ttcaatatta aaccaagcat ataatgatgg caaaataatt
     9001 aatgcaatta ctaataataa agctaaaggc gctttaaaga gacggcgcca gtctaaaata
     9061 aatatttcgt atactttccg catcaaaagc acctcctgtt tttaagcaat ttacctttag
     9121 aaatactatc taaatgtacg gataatatac aaattcacta atttttgtat tacctctttt
     9181 gctaaatcgt gtttcttttc taccatgtag taagttaact gttctaacgt ttccattgtt
     9241 tcttcttcca agagcacagg aatcatttta atatcttttt gcgctttatt aaagaaatct
     9301 cgcttcattt tcctaacaat atcttcagca taactattag ctaactgcgc aacaaattgc
     9361 aacaaccatt tgctaagtaa cgacagataa gcctccacat cttcttcttt ttgaatttcg
     9421 cgcatttcct ctaatagcgc attaccttgc tctggtttat aggttaaatt tttattttta
     9481 catttttcaa tcgtttgtac gacaaggatt tcggccattt ctaataattc aataaaacgt
     9541 cctgcactca tgctgctttc aatcacaatt gccccccggt tcagctcgta ttcgattaac
     9601 tcttcggata ctaaaaccgc aattgctttt ctgactggcg ttcgactaat agataattct
     9661 tttgcaatac cagcttctga aatatgttga cctacatgaa gctttccact gagaattttt
     9721 tctttgattg tataatatgc taatttttca tatgtttgtt tttccatgct catccctcgt
     9781 tttctatata ttaaaagtat tttctacgcc aaaaaatgac agttactccc gttgtaatta
     9841 aaagcgtaaa taaaagaatt aatgcaaatg cgtgctcatt atgcatgaat ggtagcttaa
     9901 tattcatccc ataaatacta gccacaatcg tgggtaatga caaaataatg gtaaatgatg
     9961 ttaaaaattt catcacgata tttaaattgt tcgaaataac cgaagaaaat acatccgaca
    10021 tcccgctaat tatttgggta tatgtatccg tcattgcaat tgcttgctta ttttcaataa
    10081 taacatctct gagcaaatca tgattatcct cttgctgcat aaaatgttct acatcttcca
    10141 ttttatcgag aattgcttta ttcgattgaa gggccgttgc aaaaaatact aaacttttct
    10201 gaactgccat aaaagcatac agttgctcat ttttcatcga ttgtttaatc tgtatttcta
    10261 aattatttgt ttgtttaatg atttgattta agtatttgag gtaataataa gatacagcgt
    10321 acaataattt taacaaaaat tgcttatgat tggttgtatc atattcttct aacttcatcg
    10381 attgcacatc ttttagaatt ggcagatctc gcaacgtgat tgttacaaga tgttttctag
    10441 ttaaaacaat cccaatcgga agtgtttcat acattgcgta gcctagttca tcctccgatt
    10501 cgtatggata atctacaatg actagtgaat gtcttacatc ttgctctgct cgttttaatt
    10561 ctatcctaga gcgctcctca gaatctaatg catccaaaat atacggtttg ggcacatcca
    10621 tttccttact caacatttct atttcgtcgt ctgttggagc agttactttt acccaacaac
    10681 catcttccaa agcagaaatt tgctccattt tttcatttgt tgtcttaaaa aattcaatca
    10741 tctagatatc tcccttcttc gtatcttctt tacaaaatat ttcatttatg ttacattatt
    10801 attaataata attcatttat gacaaaggag cgatgaaaat ggaatttatg tctatgatag
    10861 ttacaggaat tgttttagca gcaataatct caggactttc ttttgtggtt ggtaaactta
    10921 gtggattatc ttggttttgg attgcgtttt gtgcaaatag cggtttcttt attattttca
    10981 tcactgtgca aaattcattt ccagataacg cagccgtagc cctttcgtat ttaaatcttg
    11041 gaattggcgt agttttaatt gctttaacgc ttttccaatc tagcaattgg cttttcaaga
    11101 aaacaatgca acgtaaacat taaaataatt agtctaatct accattccct tattatcgca
    11161 tcaaaaaact gtttaagctc gtttttcgct taaacagttc tttttttatt tgaagtgaat
    11221 cttaattccg ttagaatctg tcacggaaat agtattttcc aatcgtttca catcatatcc
    11281 ttgttctatt aagttggtta ttattgcatc tttatcagga gtaataattg taaaccaagc
    11341 gagtcccgtt tcattttctt gcagaagttc caagttgcga cctgcccaga cgtttgaacc
    11401 gatgtgatga tgataatcac cagccgcaaa aaaccttgct gacggaatag cggtcgttaa
    11461 gttcattcca agtacctctt tataaaattg ttccgctttg tcagcatctg ccacttgtaa
    11521 atgcacatga ccaattatcg ttccgtttgg catccctgta aatggttcat cggtcgcaat
    11581 ttgaagcaac gaatccacat ctacttgttc tgtcaccatc ggtaaattgc catcgccatc
    11641 atgcatccat tctgcttttg gacggtctgc ataaatttca atgccattgc cttcaatatc
    11701 atgtaaataa agcgcctcgc tataagcatg atctcccgcg ccatcaatcg gataacctga
    11761 tttagccaaa tgcagtaaca catccgctaa actttctcgc gttggcaaaa gaaaggcggt
    11821 atgaaacaag ccaatccgcg gcacttctgg aacaaccgca ttatctatct ttttaagaac
    11881 aagtaaagct tcatcagacc cactcacgcc gagccgaacc attcgctcat tttcctctaa
    11941 taacttcaaa ccaattactt cttgataaaa atctgccatc tcttttaaat gtccaacatt
    12001 caatacaact tcgccaagtc gtaattcttc actaatttct gccatgtaaa aaacgctcct
    12061 tttattgtaa tacattcatt acaacataag gagcgttcaa attccaataa aacgacttac
    12121 aaaaagtaag ttaattattt tttaagtaac tcactatgtt ttctaccata agcaaagtaa
    12181 acaattaaac caataacaaa ccaaattccg caaagaatcc acgtatgaac agacaaacgg
    12241 ctaattaaaa acgcacataa taagaacgaa acaattggaa gaactgggta aaatggtact
    12301 ttaaatcctc tcgcttgaat atctttattt ttacgtaaaa agataatccc gatagacacc
    12361 atcataaacg ccaagagtgt tccaatatta accaactcag ccaatcgatc taatggtaca
    12421 agcccactaa taatcgcgac tatcactgca aaaatccagg tgtttttaac aggtgtttga
    12481 tatttttgat taatttctgc aagtactttt ggtaataaac catcacgtcc catcgcaaaa
    12541 atcagtctag tcgccccgta actcattact aaaattactg taatcatccc aacaaccgcg
    12601 ccaagtgata caatgccagc tacccaatct tggttaatca cttgcaaagc ataagccact
    12661 ggatctgtta cgtttaaatc tgtgtacggt accattccag ttaaaacagc ggatacagca
    12721 acatataaca ccgtacaaat aagtagcgag cctataatcc caatcggcat tgtccgttgc
    12781 ggatctttca cttcttcagc tgcagacgaa acggcatcaa aacctaaata agcaaagaaa
    12841 actagcgccg caccattcat aacgccacta attccaaatg gcataaacgg ttgccaatta
    12901 tccggtttga cataaaatac accaacaact aagaaaagta aaataacacc aactttaata
    12961 actaccataa tggtattcac gcgcgttgat tcttttatcc caagcgtcaa taaaaaggca
    13021 atcacaagaa caataataat cgccggtaaa ttaataaatg tacctacttc tggattaaaa
    13081 ggcccagaga ttgcttctgg gatggaaata tgaaagcctg aaagtaacgc atttaaataa
    13141 gaagaccatc cactcgcaac agaagccact gcaagcccgt attctaaaat aagtgcccaa
    13201 ccaagcaacc atccaattaa ctcaccaaaa acaacataac catacgtata ggcgctccct
    13261 gcaaccggaa cacttgacgc aaactctgag taacacattg ctgcaatcgc acaaacaatc
    13321 gccgcaatca caaaagagaa aataatcgct ggtcccgcat ttttcgctgc gactgttcct
    13381 ggtaaaataa aaatccccgt tccaacaatc gctccgactc caagtaaagt taaatcaagt
    13441 ggtccgagcg tttgctttaa atgcgtgcta ccacttttat tatgcattaa atcttctatc
    13501 ggttttcttc taaataatga attcattttg tctcctacct ttttacagtc ttctaaaagg
    13561 atatcctttt acactttaaa ggtcaatagg attgtgagaa aaaatacaaa aactaatcat
    13621 tctttcctaa agtagaacct attacccaaa tatatcagaa tcatctttca tgatttgcac
    13681 tagacgcacg attaagctaa aattagaagg aatggatttg tgcgtgttta gcacaaagca
    13741 tgctagaaag aggaattcag ttgattttat tttatttttt attaattatt ggtaagttca
    13801 ctttcgccta tttccagatt tttaaagatc ctaacttctt ggcacttgga atggacctgc
    13861 tgtttatcgt cttacttctt ggactaattc atttatttgc accggttcgc tcgcacattt
    13921 attggtatgc gggaatgtct ttatttattg ggattttaat gctcgtgtgt gtactttacg
    13981 cccggtttta taatgaagtt ccaacatatc acagcttctc tcttatcggc gaggttggcg
    14041 tagttaaaaa cagtgctaca agcctgctaa gcggaacaga ctggttgtac atcctagata
    14101 tcgttttact cccatttatc ctttatttcc atatcaaaaa aggacacgag ttcccttcat
    14161 tccgcataac tagccgtgtt tatggcgtat catttattag tacgctactc gttttaagtg
    14221 gttttactta ttttatgatg caacaaaaca ttatcagtga ctccaagcgc gcaaaacgaa
    14281 tgggaatttt cacatttaat atcagtaccg cgcttactgg tgcagatcat gttaaagccg
    14341 cagatattac tgcaaaaaac gtgaatgaca ttaaaggtgt gtcggttaag tcaaatcccg
    14401 attacttcgg tgctgctaaa ggaaaaaatc ttattatcgt tcaactcgag tcattccagc
    14461 gtaatttaac gaacgtcaaa attaacggtc agtcgattac gcctacatta gatagcttac
    14521 aaaacgaaac catgtattcc aaccaatttt tccaaactgt ctctaagtca aatacggctg
    14581 atgcagaatg gtccgtttat acatcgactt tcccaagtgg atattacacg aacacacaaa
    14641 cttacggcga ccgggtaatt ccgtctatgc ctcgtttact tggcaaaaat gattataaaa
    14701 cagcgacctt ccatacaaat gatgctagtt tttacaatcg cgatgaattt tatcctgctg
    14761 taggatttga taagttttat gatcgtaaat tctttggcga tgaggacgtt attggctttt
    14821 ctcctagtga tgaagtgctt tataacaaag cctttccgat tctagaagag cagtacaaaa
    14881 acaaccaaaa attctatgcg caattaatta gtgtaagtag tcatatgcca tttgatattc
    14941 caaaagataa gcaagaaatc gacttaccga gcgatttaaa agatacagaa cttggtaact
    15001 atttcgaagc ggttcattat gcggataaac aacttggtga attcattcaa aaattaaaag
    15061 atagcggcat ttgggatgat tctgttgtcg ttttctacgg cgatcatcac attatcaaaa
    15121 ccgaccaact acctgaggaa caaaaaaaat acgtcaatcg ttctactgag ttaaaagcgg
    15181 atccagccga tgattaccgt attccgttct tcttacatta tcctggcatg gaaaaccctg
    15241 gtgaaattaa aaatgttggt ggcgaaattg atattatgcc aactgtcatg aatttacttg
    15301 gtattaaaac tggtgaccaa attatgtttg gaaccgatat cctcaattca tcaaataatt
    15361 acgtacctga acgctacaca atgccagaag gaagttattt caccaattct tacatgtacc
    15421 aaccagatga aagtttcgaa actggcgcag caacgaatta tgatggaaca aacaaagaac
    15481 tttcgagtga tgtaaagaaa cgctttgacg ctagccgaaa actcttacag tattctgata
    15541 gctatgtaaa caatttacca ttacgagacg aagataaata aacaaaagaa gtatccagca
    15601 aatctggata cttctttttt cgcttatttt ggtaaagcgg cttgatgttc attaaatttt
    15661 tcaatacttt caagcgctag aggtttgttc atcatttgta aaaacaaatc atagccaatt
    15721 gtaacggtat cagctccact agctagtgct tgcataattt gacgactatt tttaaagctt
    15781 gcacccataa ttttcacatc ttcaagtcct tgtaaatcta acacgtatcg cagttcttct
    15841 attgttttcg ctgcgtctag tccgcttact tccatgcgat tataatatgg cgctaaataa
    15901 tctgccccag agagcgctgc aatataacct tgttccgatg agaaaattgc tgttgctaaa
    15961 ataatttcat ttggaaaatt agcgcgaact tttgcgatga cttttatccc ggcttcgtgg
    16021 gctgggattt tcaagccgat taccgtacct tctgccggct caattgcttg aattcgaagg
    16081 acatcttccc agatttcctc ttccgttaac ccagccgctt gcacaaacac aactttggct
    16141 ggaatattcg ctatatgcgt gtttctcggc ttattctcct ttaataaaat agtcggatta
    16201 gtggttacac cttcaaaaaa cggaaattga agcgctttct ttatttcctc taaattcccc
    16261 gtatctaaaa acatttcctc actccttcaa agttttcttc tcattttaag tgtagaaaag
    16321 ttccacgagc cagtcaattg tttctgagac ccaatgttgt tggcgatttt gtacaacaaa
    16381 aaacacctcc acgtgccgag gtgtttttta ccgctatttt ttcttcggtt ctttcttcca
    16441 atttttccgc ttgaattcaa agcgttccat ccatggtcgg ccttttttca gtgcaaaata
    16501 gccgacgatg acgataaata gtgcgccgat aatatcgaca ataatatctg tcatcgtatc
    16561 ttccagtgcg gcgcggccag tgagcggtgt tccattagat agattataac gttgcatatt
    16621 taagttcata attccatcaa aagtatactc atacacttcc cagaaagccc ccattgtcac
    16681 cgcgaaacaa aacgcgaata cagcgataaa acccggttta agtttcatga caactttgtt
    16741 attagcattt agcaaactaa cgaacgaaaa gccaattgct ccaagcatcg ccccactaaa
    16801 agtatgtaaa attttatccc aatgtggcac ggttgaatag aatttttgaa ctgtaccaag
    16861 ataaatggat ccgtatagaa atacaataaa caaaatatac acaagaccag gtatttcaaa
    16921 tttgaagcgt cgtgcaataa tcgaaggtag caacaaaata aaaattccta atataatttc
    16981 aaatagtaaa aatatatagt cccctcgtaa cgtcacatgc ggcccagttg ctggctgctt
    17041 gatcggtgct gtaaaaattt cgtaaatagt aaaaacaaca gaaatcccca ttgacgcaaa
    17101 aacaaataat gctatccatt gtgtccaatt gatctttttc atgcactcat ctccaatcta
    17161 tcatgtaata cccttttttc gcaaaaagaa actgctcatc catcttagac taggaataga
    17221 caagcagtca aatttatcac tttttccgat tagatcgaag gagcctaagc ccatttagaa
    17281 taactaaaat agtacttccc tcgtgcccca caacgccaaa tggcaaattg attagttgga
    17341 aaacattcgc tgttatcaaa acaagaatca ccgcaatcgc aaaacaaata ttttgccaag
    17401 taatccagtg aagccgttca gaaaggttgt aagcatatgg gattttctcc aaatcatttt
    17461 tcattaaaac aacatctgct gtttccatcg caatgtccgt cccctcgccc attgcaattc
    17521 caacagccgc atgtgcaaga gccggagcat cattaattcc atcaccaacc attgccacac
    17581 tgccataagt aaccgacaat tcttttaaca catccacttt tttctcaggt aaacaaccgg
    17641 aaacaacata gtccattccg agttcggctt gaatcgctgc acctgtttgt tcgttatctc
    17701 ccgtcaccat tatggtttta atcccttttg cttgaagtgc cttaatcgta cgaatggctt
    17761 caggccggca tgtatcttta agggcaaaca tagcctgaat cacgccgtct ttagctacat
    17821 aaacaatcgt tttcccttca cccgcaagtc gctcaaatgc accatttgaa aatgctgccg
    17881 ctgcttcttc cccaacaaac ccagctttcc caactttcca atttccctct tgataaatcg
    17941 cttgaactcc ccatccagct acatccgtca cttcaatttc tgttaacttt tcggtgattt
    18001 ctgcctctag gtcttgcgtt attgccgcag ctaacggatg taaagattgt cgctccatcg
    18061 ctccaactac attgattact tgttgcttat cgacattttc agcaaataac cgatctgtca
    18121 gttctggtgt accatttgtc agcgtcccag ttttatcaaa tgcaacagct tttacaccgc
    18181 gcaaattttc caagtgtacg ccgcctttaa acaaaatccc gtgacgtgca ccgttcgaaa
    18241 ttgccgctaa agtcgcaggc gttaccgaag ccactagcgc acaaggggaa gcaaccgtta
    18301 gcaaaaccat cgcacgataa aatgtttcat tccaagacca ccctaaagca aaatgaggca
    18361 agaacatcat tactaacaca aataatagaa ctgcttttac atacgcatcc tcaaatcgtt
    18421 caataaagcg agcggttttc gaaggttcac tttgagccga ttctactaaa cgaataatct
    18481 tactaaaaat cgtattatca aatgtttgcg ttactttgac cgtgatggcg ctgcttacat
    18541 tgaccgtccc gccaaacaca tccgcaccaa ctgttttcgt cgctggcact gattccccat
    18601 taatggctgc ttcatttaac gtggttgacc ctcgaacaat gactccatcg attggaacac
    18661 tttctcctgg ccgaacgaat accatatcat ccagttgtaa ctcctttgca gccacttcct
    18721 ctaaatctcc attaggaagc aaacgaaagg cgcgttctgg ttgaaatgcc attaatttcg
    18781 tgatttcgcg cttactttta ttggtcgtat acgtttctaa agcgccacta accgagaaaa
    18841 taaaaataag tatggcccct tcaaaccaat aaccaataat agatgcaccg gtagccgcta
    18901 aaatcattaa gagctccaca ttcaactttt tcgttttgat agtcgcttga atgccttctt
    18961 tagcttgctc aaaaccaccg ataacaaagg cacttaggaa aataaccgct gtccaaaagt
    19021 cgccaacatc actgccgacc aaacaaccta tcacaatcaa aatcccgcta atacccgtcg
    19081 taataaattg ccaattctgc ttcatccatt ccttcattat gctcatcctc tccaaatgat
    19141 aatgattccc attaccctaa aaaacacaaa aatctgcttt cgcaaccgcg aaaaacagat
    19201 taaacaataa ttattataaa taaatataaa aatatgcgtc cttaactcac ttgttattat
    19261 agcactttcc taatgacata tcaaactaat tgataaaatt gcattctaat tgagaatgaa
    19321 tttcactatc actccaatac ataaaaaaac acttgagcat aatgcccaag tgtctgatct
    19381 cattaaggta attggttgcc agccgcacgg taaatttcat accattcttc gcgactaagt
    19441 gttacgtcag aagcttttgc aatatcagca attcttcccg gattcattgt accaaccact
    19501 gtttggaagc tcgctgggtg gcgctgaatc cacgcaaccg ctatagctga gttagttaca
    19561 cctttgtcag cagcaatttt gtcgattact ttgttcaatt cagggaattt atcgttatcc
    19621 aagaaaactc cttcaaagaa accatattgg aacggggacc atgcttggat tgtcatgttg
    19681 tttaagcgac tatattccaa aataccgccg tcacgatcaa gtgaaggatc aatcgtcata
    19741 ttcacattaa aaccagtatc aatcataccc gtatgcataa tgctaaattg cagttggttg
    19801 gcgattaatt cttggtctac atattttttc agtagttcaa tttgacctgg attttgatta
    19861 cttacgccga aatgacgcac ttttccactt ttctctaatt ctgtgaaagc tgccgctact
    19921 tcttctggtt cgaaaagtgt atccggacgg tgaagtaaaa gtgtatctaa atagtctgtt
    19981 ttcaggcgtt ttaagctacc ttccacagaa gcaataatgt gctcttttga aaaatcaaag
    20041 aatccttgac gaattccgca ttttgattga agaatcattt tttcacgaat agttgcattc
    20101 atatcaattg catcagcaaa aacttcctct gatttaccgc cgccataaat atccgcgtgg
    20161 tcaaaaaaat caatgccatt ttcaagtgct gtattaatca ctttattggc atcctcttta
    20221 ctaagatccg ccattctcat acatcctagc gaaatttctg aagctgttaa agcgctatta
    20281 ccaattgtta tacgtttcaa actaagcacc tctttctaaa agtatatcct tattctaaca
    20341 ctttgttgta atcgttacca agcttaacct tctgaataaa aattaatgcc tttatccgta
    20401 tcctccacaa cgattccagc cggttgatta atcaagagaa tgcagtagta aaaatcccca
    20461 acacaaccag acgtatgtaa cgcaaaaatt aaataaagaa ccgcttcatt caccccaaga
    20521 aatcgcagaa aaatgaacaa acccgtaaga acgataaatg gcgcaatcga aataataaag
    20581 aattgtgctt tcgtataaaa tgctccgggg cttccagcat aagccatccc atttttaaaa
    20641 ccaaatttca cttttgcttc tggacgaaat gctttaaaga aaatcccgtg tacggcttcg
    20701 tgaataacaa ttgctactgc ataaccacca aacatccaaa taatccccat aaaaccattc
    20761 gtaattgcaa aaccacctga aaaaacaatt cctaaaacag ttaatatgag tacaatagca
    20821 atcgcaacaa tattcaaatt cataaccaat tttttatttt ctagtaaatt aatttcctga
    20881 atcaattttc tttccatcca gaccgctcct tttataaaaa cgctgatatt ttcgttatta
    20941 caattataca atacttcttg tcagcattct atgtcatagt ggggaaatac ccaagtccgg
    21001 ctgagggagg tgaaaagttt ttcttttgtc ggtttctata aatttttaca agcctttgaa
    21061 tcgttaaagc tatatactct catgtcacaa ccttacaaac aacaatatct tctatattaa
    21121 tatcaattaa tcgttcgtca aatcacttta attaacctat gtttctttcg tgatctaaat
    21181 taacaggaac tacatacttg tattgcatat gatgattgtt ctttaagtat aatgtttcta
    21241 ttgaccaatt acgtttaag
//
LOCUS       DASDYK010000040        20393 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.040, whole genome shotgun sequence.
ACCESSION   DASDYK010000040 DASDYK010000000
VERSION     DASDYK010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 20393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20393
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.040"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            98..532
                     /locus_tag="U0308_001460"
     CDS             98..532
                     /locus_tag="U0308_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316427.1"
                     /translation="MGQLFNLPQVEDINYIQTVRAVRKFFKDYLMLRVMAGSRKLPTM
                     TTTYKLTPPNFSNEFHSKVEDAAIHNVDNVHAAQEAIKKYDAILNQLEHIHRKILFEK
                     FIHNLQDITIMLDIPYEERQYKREKRKAVIELATTLGIEVLN"
     gene            893..1456
                     /locus_tag="U0308_001461"
     CDS             893..1456
                     /locus_tag="U0308_001461"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316428.1"
                     /translation="MMQTIISLAILGIVAFIGYWAKDLPGIYKAITVENKRKFNELDI
                     QRESFFRQLRGDDLANTFGEWVSAYTDMDEFVEKAPTILKDMQKKVIMYGSPKTVSIL
                     AMLSQHTYIGSGEEDVGKGTRFDNYKLMLYIANLIASLKFDFTGYKIDPMDIVRVRIT
                     DYKENETQFKENQQKIETEIQKLGYEL"
     gene            1553..1738
                     /locus_tag="U0308_001462"
     CDS             1553..1738
                     /locus_tag="U0308_001462"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316429.1"
                     /translation="MESNKTLVIWFKNGKTAIFEQVENLDAAEKAIVFDYYGKSTETK
                     RSAAFFLANIAGFAESV"
     gene            1780..2322
                     /locus_tag="U0308_001463"
     CDS             1780..2322
                     /locus_tag="U0308_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HEM2316430.1"
                     /translation="MKLTEKQKRFADEYIKCGNATEAARLAGYSSKTANRIATENLSK
                     PVIKGYIDKVLSELEEKRVMGYTEAMQLFTEIARGEMEEEVIVSNGDGFSVVTKSADI
                     NQRVSALKEIVKRHVAGGRDKLQEELIQAQIDKLRADTKQESNQGTTTIIMSNVDEMQ
                     AYLDKKAGGTDERDDTQTTS"
     gene            2291..3622
                     /locus_tag="U0308_001464"
     CDS             2291..3622
                     /locus_tag="U0308_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HEM2316431.1"
                     /translation="MNATIHKQLVDYQVINVTDMINPAFYDLWLSKHNHIIAKGGRSS
                     MKSSVISLKLVEKKMANPKSNMVCLRKVANTLYKSVYQQIKWALYEMGVADQFNFGKS
                     PMEIVHKTWGTGFYFSGCDDPAKLKSMKIPVGYVSDLWFEELAEFSGVTDIDVVEDTF
                     IREDLPDGQEVTTYMSFNPPRNPYEWVNEYVDTKRGDDDYLIHHTTYLDDEKGFLSKQ
                     IIKKIEKYKKNDLDYYRWMYLGEVIGLGDNVYNMNLFQPLKAIPADDRLILIDFAIDT
                     GHQVSATTYLSFGLTAKRNVILLNTYYYSPANQVVKKAPSEYSKELRDFMTKVVGNYN
                     TNVDMQTVDSAEGGLRNQYYKDYGVSLHPVAKGKKVDMIDFVCDLLAQGRFYYLDIPE
                     NQIFIEEHRKYQWDVKTINTDKPEVIKEDDHTCDAFQYYVKDNLRKLGLKF"
     gene            3635..5134
                     /locus_tag="U0308_001465"
     CDS             3635..5134
                     /locus_tag="U0308_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015967141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEM2316432.1"
                     /translation="MINQIIASVKGVMRRMGLLKALKDVKDHKKVNANDEDYKYIDMW
                     KRLYQGHYAEWHNLNYEHNGNPVNRRQLSMNLPKVTAKYMSKLLFNEKVKINIDDKAA
                     EEFVLNVLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGKKNVKVSFATADCMYPLSND
                     SENVDECVISNSFHKNDKYYTLLEWLEWKGEKVEVYTVTTELYQSDDPNELGTKVSLA
                     LLFDDIEPVAPLSKFTRPTFTYIKPNIANNKNLTSPLGISIYANALDTLKTLDLMFDS
                     YYQEFKLGKKKVLVPSSFVKTAVNLDGSTTNYFDSTDEAFFLYQGDQDADGKSVKDIS
                     VEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLKTATEVVSEKSETYQTKNSHS
                     QLIEQGIKEMIVSILEVGKFIEAYSGDIVELDTITVDFDDSIAQDEDTTINRYTNAKN
                     QGMIPLKIALQRAWNITEAEADEWAEMLAKEKQAEMPNNDMTGIFGEEE"
     gene            5140..6279
                     /locus_tag="U0308_001466"
     CDS             5140..6279
                     /locus_tag="U0308_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor capsid protein"
                     /protein_id="HEM2316433.1"
                     /translation="MALTPRQLDLFVQPVVDVYTTLENELFTLIVRRLKTKKNISADN
                     VLAWQIEKLNQVHALDQQMIERISKASGVSAKKLFSIVKDAGYSDLTQVDNYFSKLAE
                     TGAVLPLVSDGQTIVDKVMRSYFKLAQSNYNRVNQTMLSQARQIYSDIIHETTQSVLA
                     GLKTHRQALAETVTKFAENGVPALVDKANKRWTPEAYVRTVTRTTVNSVYNSVEDERM
                     NEYGVDLVRISQHVGARPTCSIVQGKVICLLSVEETKTKYGNKYMSIYSPELRYGYGD
                     GIFGCNCRHHRFAFVEGINIAPGENELIDEEENKRVYMLSQQQRLMERDIRAAKRKLS
                     AAEELGDELTVKKAKQAVRTKQSKLRAFVKTHNLTRQYSREKVYA"
     gene            6358..6948
                     /locus_tag="U0308_001467"
     CDS             6358..6948
                     /locus_tag="U0308_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage scaffolding protein"
                     /protein_id="HEM2316434.1"
                     /translation="MERDFLKELGLEKETIDSIMVEHGKSIQNEKDKVTSAEAERDGL
                     KSQLAQRDDDIEALKTDSGTSKSLKAQLETLQDNYETLKKDSEAKLVETRKGAALDLA
                     LANAKARNPKAVKALLDNDKLELTDEGLKGLDEQLGALQESDAYLFAQESEAVPKFGF
                     SGNPTAPAGFSGSLKENLKSDSFNLTKFLTEKGESE"
     gene            6948..7949
                     /locus_tag="U0308_001468"
     CDS             6948..7949
                     /locus_tag="U0308_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coat protein"
                     /protein_id="HEM2316435.1"
                     /translation="MGNEITKLLDVVTPEVFNAYMDNFTSEKSAIIQSGIAVADPSVA
                     QNITAGGLLVNMPFWNDLDGEDETLGDGEKGLETGKITASADIAAVMYRGRGWSVNEL
                     AAVISGDDPLDALMGKIASWWMRREQTVLISVLNGLFAKNGALASSHLLSKPTSAISG
                     NLVLDAKQLLGDSSDRLSLMVMHSAVYTALQKQNLIAFIPNARGEVNIPTYLGYRVVV
                     DDGVPSTGTGAAKVYTSYLFATGSIGRNTGNPAKLTTFETARDASKGNDQVFTRRAFT
                     MHPYGVKFKNAVRDANEITPTNADLAKAGNWEKVYEDKQIGIVGIQHLVEELPASGA"
     gene            7968..8363
                     /locus_tag="U0308_001469"
     CDS             7968..8363
                     /locus_tag="U0308_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316436.1"
                     /translation="MPYTTLEFYTNEYAGEHLEQDEFDKLLKHAERKIDSVTFYRIRK
                     SGIESFSEFIQHQIQLATCNQIEYFKEAGGTSELAVSKPDNVSIGRTSISDSNFASTA
                     TSLNSGLIGSDVRSYLAHTGLLYNGVGVR"
     gene            8363..8725
                     /locus_tag="U0308_001470"
     CDS             8363..8725
                     /locus_tag="U0308_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HEM2316437.1"
                     /translation="MKVVKPITNAPPLPLDWLIHNISYEAYKEEDRHNQVVYEKGIEI
                     EHVRVDFSKSNQIAGLSDSDRYDAVIFIDAVNSMNVPADFISRSRIFFSGKAYKIVKV
                     IPCYATSENVHHWEIEVV"
     gene            8725..9063
                     /locus_tag="U0308_001471"
     CDS             8725..9063
                     /locus_tag="U0308_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HEM2316438.1"
                     /translation="MPIKVNIDLSKAKKNVKKAKEGAQFALINQAAADISLYVPFLEG
                     DLSNQYVIMNDKEIMWTSIYARRLYNGINFNFTLTHHPLAGPEWDQRAKVDKLESWIE
                     VAQKSVEEGL"
     gene            9063..9470
                     /locus_tag="U0308_001472"
     CDS             9063..9470
                     /locus_tag="U0308_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HEM2316439.1"
                     /translation="MSLDFLDSVMDAIENNVDLKDMKLRTAILKPESIALLLTPNNDK
                     QGYQDGSYERSFSFNLNGSSKQEMKVLGVLNAIAAYFDKTEIESIQSLNNSFVLEDKE
                     TTSVPNLVSASDDGTFIYSASFKIKLYIESEEK"
     gene            9473..9910
                     /locus_tag="U0308_001473"
     CDS             9473..9910
                     /locus_tag="U0308_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003722534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM2316440.1"
                     /translation="MARIKNAKTKYFVAEIVDGAGEPVWKRLSKWITNVSDDGSDNTE
                     EQGDYDGDGNEKTVVLGYSEAYTFEGTHDREDEAQNLIVAKRRTPENRGIMFKIEIPD
                     TETAIGKATVSEIKGSAGGGDATEFPAFACRIAYDETPKVTKP"
     gene            9840..10172
                     /locus_tag="U0308_001474"
     CDS             9840..10172
                     /locus_tag="U0308_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig domain-containing protein"
                     /protein_id="HEM2316441.1"
                     /translation="MLRSSQRSLAVSLMTKHQKLQNPEESPSSVEVDKATITLKVGET
                     STITASVLPVGASQEVTFTSSNPPKAKVNASGVVEGVAEGTANITVASKGSPSINKVV
                     QVTVEAAD"
     gene            10225..10647
                     /locus_tag="U0308_001475"
     CDS             10225..10647
                     /locus_tag="U0308_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly chaperone"
                     /protein_id="HEM2316442.1"
                     /translation="MTQNNVINIQLEESYQEFQLGTELFRVGLGDEMRRKWIEADEKY
                     KKKLEKLNKYNIDNTDEMSSEEYFTLEEDVKEALTEAYAILLDDEKAFDKCYAQCKDI
                     LKMYQVYNQVAEIIVGSVEKQQNEIQKKYKAKMTKKAK"
     gene            10653..11258
                     /locus_tag="U0308_001476"
     CDS             10653..11258
                     /locus_tag="U0308_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriophage Gp15 family protein"
                     /protein_id="HEM2316443.1"
                     /translation="MLSLAFGVNDIYEYEGKEYKLDLAFDNVLRVIDLTEDNSLSDVF
                     RANLAIDVLFADDMPWPRSNEEDKYANIEEKSLVLIDIFTNYIVKENDDGLLYDIDGN
                     KMPSATNNNDEAEEIASYSLTQDADYIYASFLQDYNIDLLDSRGKMHWYKFRALLESL
                     RDDTTIKTIIGIRQAELPSGKGTEKERNELIKLKNRYKLKD"
     gene            11269..16635
                     /locus_tag="U0308_001477"
     CDS             11269..16635
                     /locus_tag="U0308_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HEM2316444.1"
                     /translation="MSDGSVVIEISLDDKKADKQLDAFEKDLEKAGTNAGAALDKAYR
                     EAVSDIASQSKRLKDTFVNAFKSMGSAGSNALKASLNFMRELPSNVQAALSKLASTVK
                     TGFVNAAKASITVIKELGTSIKNTAVNIKNGFFSIAKTVQSSIVSAVKVSINVIKSIP
                     SAIKSAGISIKSALVSSLQAAKSAAISFAQTTVKVIKSIPVAAKTAATAVKNSFVVAY
                     KAVVVAAYMSVKGTISAVKAIPSATKSAALAVSSAMKTAFSAVASAAKTTGTTVKSAL
                     KTGFSAVKSGAKAAGQAGISALKGLGNIAKSTGSLIKSGLVSGFNAAKAAAKGAGAGM
                     REALKNSVEKPAEQARFSLLKLAAALGLIAATKNVVGSAIGRVDTIDTATKSLTVLTG
                     SAKDAQLVMTDLTAAIDGTPIALDAVALGAKKMVAAGMKAANVKPVFTAIADAAYGVG
                     NGSESIDQMTDAISALQASGVAYADDINRLVDAGVPAWQILANSTGKSVGEMKKYVSE
                     GSLESTKAIAMLTKGIEEGTTGMAGNTAKMAGLAKTAGNTISGSFANMKTAAVKSLAN
                     IAENLKGPIIQALDVAKNAFKQFAAVTASPEFQKKLSDLIQKIKEFIPVLIEWAPLLA
                     KVAAGFVAFNIISSVFSKVAKLAGAIKSLTSSGSLLSVVVNTIKGSFVKLAGTLGSTT
                     AAFGVVAAAVGAVIAVIYGMYTAFKENTAGIKSFLSGMWEAVKNSFGKIIDVFKQIVS
                     ALKPVGSGFKDILKYIGVGAWIVLGFALAAVVDIIQVLARIVLVAIKALQGLYYAIKA
                     AFQALHWDLKGAKKSLEQSKDAFVEAGSAIKDAFNKDNYALTGTVEAFKQMGGEAEKT
                     AKKTETSGKKIKETLKLVETTAKQTETTVSKSNQAIDTMLNGGVDQYGKKLSEKTESF
                     LNAAKDLYEQYQEATKKSQDKYSVAMEKAQSLEGDKRKKAIADANKTLVDETTKNNST
                     LLTLQSDYSNMLKTNRWADGQELTAQQKKFLQQQTTDIQTELAKQNQLYVEANLLRLE
                     QGKSLNEKERNTSLEVQKSLYEEKKKAVETGEKSLADLKKKKADASTETEKANYQIQI
                     DEQTKKNKTLSTNLKNWATEMNAIIANGGTLNAETFANGLSQLGNISDEQLSALWQNF
                     VSTSTSIDNTLSGLAAIMGQRGGEGVQAFVTALQSGDYTTAALNINNDVMNTLSTLPN
                     GMFQNGQSGKDQFITAIKSGDFQGAGKFLLDGVKLGASPLPGEMNNIGKQGGNANADG
                     LKSTAEANKSAGAELKNNAKNGAFDPNLFKMTGSNNASGFNSGILDGKGNAFSAGTGI
                     GNSAKSGAGSVDSSGVGSDFASGYVNGILSGMGAVGEAAGSLANKALQAVKDAQKSKS
                     PSKKAKKLGGDFGSGYSLGIASKTKAVNKAASNLVAGALGTESQIKKLSSTLKDKISS
                     AIDAGLHSKNKSRGQLKQAKALNSIEGYIVQQTNRLAATAKKRDKVVAQLKAANTKMA
                     DLTKQSKEYAASITEKMQSYGSISNVDAENPQSIQAEMQKRLKEIKAFQANVEKLRKK
                     GVSKDIISDILESGVENGSSYAQALAKSDAKTIKAINSTQNQINSASKSMGNTAANAM
                     YSAGINAAKGLINGLNSQKKQLENTAKSIANTITNSVKKALRIHSPSRVAIELGKFFT
                     DGLGNGVLAGAKGAVQSTNKMVDKVVNAASNLTVPAITLPKISAEKALGLKSVDLNRT
                     ITVKTIIDNKTKESSNADLIKAIKESGAKPVILNLDGEVLANNSNNRIGSMTDLGLYG
                     GGLL"
     gene            16632..17459
                     /locus_tag="U0308_001478"
     CDS             16632..17459
                     /locus_tag="U0308_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012582412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HEM2316445.1"
                     /translation="MNKKTDLYLMQANKIIKLNEKHNFEISEVSRASPQIINNYTSYE
                     FSDGNRSSDSNFDSFDIEFTCRFKTNGNIDYHVRLDELFEDIFIRKEYYIFHTKTPGK
                     KYCVHPAPFDIDRKGAGHAQFTLRFEVFKGFSESLGTSLSPFAFSEGIWQAGQGIVSQ
                     NYKYKHTSNRFIVYNAGSFDIDPRMHDLRITIKNCRSDGLLTINNKSTGEKFVFNEKI
                     YAYDTIELDGSNILKNGVRCGRKTNLGLISLLSGGNEIEIENVSNIETTWDFPFLYK"
     gene            17474..18496
                     /locus_tag="U0308_001479"
     CDS             17474..18496
                     /locus_tag="U0308_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM2316446.1"
                     /translation="MDIFVSDYEKQYKEILTGFDPTTFSETWVENQQWQLDFYVEKTR
                     NNQDVFDLLNHESSVYLDGQEFVVKQLKRGAVGKIVYSEVTATHIYFTMQDDYQYNAI
                     SGSKSAKDCLTHIFAADKQGFSFELIDKNKVLENITQENFGNGNLLKLVQEVLEDYKL
                     VMLADNKRLTFIPSEDYGEHTENEIRYNKHTNEVDFDIDTLSLRTQIKGYGKVDSNGN
                     NYFPPVTFTSPESAKWGVRIQEPLSDERYTTSSSMLRRLKLELQDYPATTGNISLKLK
                     YECGKGDYVMFVYEPLGLLYEVQIVAYKKYIFTNKPPELTLSNNKKTMVSIMVQLAKA
                     IKRGAK"
     gene            18497..19522
                     /locus_tag="U0308_001480"
     CDS             18497..19522
                     /locus_tag="U0308_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316447.1"
                     /translation="MDLKKWQDPLMNSELQQNYNDNLVKLAGSLEKANQDMTHVNQRI
                     SNLVIKSGGNESNEVVDARVSSLVPETEFTTLNDRINYAENALITGVGKLSTNVFDLM
                     DKYNDIDTILKRLYGLDSSNIEIFVDDARGDDIAGTGEIDAPFKTINKAVMTLPRVLN
                     SNSVNIWIVPGRYNEDVVIPPIMGGDIYIRSTNFETVDPTSSTGCQVRSISATGSNGY
                     LYIAGLEETNTAGTTKNYFIKATRCGFVRITKCRMAFNTKAIDPFTAVFIDACSADVN
                     GCYFASQNVDVRGYNTARVEVQNIVHGAKSAIGLYPQSADIFNLNSGTWEADTPTKLS
                     GGGVVRT"
     gene            19519..>20393
                     /locus_tag="U0308_001481"
     CDS             19519..>20393
                     /locus_tag="U0308_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BppU family phage baseplate upper protein"
                     /protein_id="HEM2316448.1"
                     /translation="MTENVIHKNGVYDFNVTTQEDKPLQKSVFYTQDSGGTARLIFNI
                     DKDNQDLVLSSAAELELAMILAKGTESESKYLVKPTIIDGVRGIAEYSLTDSQIAHAG
                     NAIAELYIKYKNSQAMRVYKFSFEIKKALIDSDFFPVSEFYVERWDDYEKIFDESFER
                     LNTKLDDVDKKADDLKTQFDDMQPSQFAQKTDLNAHVNNADIHVTAADKTNWNSKETA
                     SSAQAKADKALADAKTFFELASAVQSVTLTPKNGFVASQPLVARYIKFGNRFLVIVSG
                     IVGKGTGNGTGICAT"
BASE COUNT         7178 a         3373 c         4437 g         5405 t
ORIGIN      
        1 agaagcaatt agtgaagaat cttttattga tacagctgaa aaggttgaga aaataaggga
       61 gtttatcgaa aatttataaa gtgatggggg cgactttatg ggacaattat tcaatctacc
      121 acaagttgaa gatattaact acattcagac agtcagagca gtaagaaagt tctttaaaga
      181 ctatttaatg ctgcgtgtga tggcaggaag tcgtaaattg ccgacaatga caacaacata
      241 caaattaacg ccaccgaatt tcagtaatga atttcattca aaagtagaag atgctgcaat
      301 tcataatgtc gataacgttc atgcagcaca agaagcaata aaaaaatatg atgctatttt
      361 gaatcaactt gagcacattc atagaaagat actgtttgag aagttcattc ataacttaca
      421 agatataact attatgcttg atattcctta tgaagaaagg caatacaaaa gagagaaacg
      481 gaaggctgtt attgaattag caacaacact tgggattgaa gtgctaaatt gaaatggcac
      541 tttttgggca ctttttgagc aaaaaaaggt gataaaatgt tattagtgag aagtgaagat
      601 gattacaaaa ataaaatctt atattgagtc tgcgctccac ttctcattta taatcttatg
      661 atgatatagc aggagattgc tatgttgcct ggcagaggct ttgtatctgg ccattagtct
      721 caacagatga cgacacttct gttcaatctc atatcctatc cacactggat gtaaaacacg
      781 catgtggcgc tgactggtgc gttaaccagt tttaaaaatt ataatccttt ccatctgtta
      841 ataattgagc aggtggtttt tatttggtat agtgaagata aaagggtgga ttatgatgca
      901 aacaattatc tctttagcaa ttttaggaat agtagctttt attggatact gggctaagga
      961 ccttccgggg atatacaaag ctataactgt agaaaataag aggaaattta atgaattgga
     1021 tattcaacga gagtcttttt ttagacaact cagaggggat gacctggcaa atacgtttgg
     1081 ggaatgggtg tctgcgtata ctgacatgga tgaattcgtt gaaaaagcac ctacaattct
     1141 taaagatatg caaaaaaagg tcattatgta tggttcgcct aaaactgtat ctattttagc
     1201 aatgttatct caacacacat atattggtag cggagaagaa gatgttggga aaggtacgag
     1261 atttgataat tataagctaa tgttatatat agctaattta atagcctctc taaaatttga
     1321 ttttacagga tataaaattg atcccatgga tattgttcgt gtgagaatca ctgattataa
     1381 agaaaatgaa acacaattta aagaaaatca acaaaagatt gaaacagaaa tccaaaaact
     1441 tggatatgaa ttatgagttt atttgaaata agacatttag ttcgaagtta atatattaac
     1501 agtcccgatt attcggggct tttttgatac ataaaaataa ggagtgatga aaatggaaag
     1561 caataaaaca ttagttattt ggttcaaaaa tggaaaaaca gctatttttg agcaagtgga
     1621 aaatcttgat gctgccgaaa aagctattgt atttgattat tacggtaaat ctaccgaaac
     1681 aaaaagaagc gccgcttttt ttctagctaa tattgctggc tttgcagagt cggtataaga
     1741 aaagtatttt attaaaataa agggagttgg tgatatgtag tgaaactaac cgaaaaacaa
     1801 aaacgatttg cagatgaata tataaaatgc ggtaatgcta cagaagccgc tcgtcttgct
     1861 ggttatagtt cgaaaacggc taatcgtata gcgaccgaaa acttgtcaaa accagttata
     1921 aaaggctata tagacaaggt tttaagtgaa ctcgaagaaa agcgcgttat gggctatacg
     1981 gaagccatgc aattattcac cgaaatagct cgaggtgaaa tggaagaaga agtaattgtt
     2041 tcgaatggtg atggcttttc cgtcgttaca aagagtgctg acatcaacca acgagtatca
     2101 gcattaaaag agattgttaa gcgtcatgta gcaggcggta gagacaaatt acaagaagag
     2161 cttattcaag cgcaaatcga taagttaaga gcagatacga agcaagaaag caatcaagga
     2221 acaacaacaa ttatcatgtc gaacgttgac gaaatgcaag cctaccttga taaaaaggca
     2281 ggtggcaccg atgaacgcga cgatacacaa acaactagtt gattatcagg ttatcaatgt
     2341 aactgatatg attaatcctg ctttttatga cttgtggcta tctaaacata atcacatcat
     2401 agcaaaaggc ggacgttctt ctatgaagtc gtctgttatt agtttgaagc tcgtagaaaa
     2461 gaaaatggct aatccgaaat ctaacatggt gtgcctacgt aaagtagcta atacgcttta
     2521 taagtcagtc tatcagcaga ttaaatgggc gctttatgaa atgggtgttg ctgaccaatt
     2581 caattttggt aaatctccaa tggaaatcgt tcataaaact tgggggacag gcttctactt
     2641 ctctggttgt gatgatcccg ctaaactaaa atcaatgaaa attccagtcg gttatgttag
     2701 cgatttgtgg tttgaggaat tagcggagtt ctctggcgtg actgatattg atgttgtaga
     2761 agacacattc attcgtgaag atttgccgga tggtcaagaa gttacaacat acatgtcatt
     2821 taacccgcct cgcaatcctt acgaatgggt gaatgaatat gtagacacta aacgtggtga
     2881 cgatgattat ttaatacatc acactactta tttggatgat gaaaaaggct ttttatccaa
     2941 gcaaatcatt aagaaaattg agaagtacaa aaagaatgac ctcgattatt accgctggat
     3001 gtatctagga gaggtaattg gtcttggtga taatgtttat aacatgaacc tgtttcagcc
     3061 gcttaaagct attcctgcgg atgacaggct tattttaatt gatttcgcta ttgatacagg
     3121 acatcaagtg tcagctacaa catatctaag tttcggtctc actgcaaaaa gaaatgttat
     3181 tttgctaaac acatactatt atagtcctgc taatcaagtt gttaaaaaag cgcctagcga
     3241 gtattcaaag gagttgcggg attttatgac taaagtagtt ggaaactaca atacaaatgt
     3301 tgatatgcaa acagtagata gcgcagaggg agggcttcgc aatcaatatt ataaagatta
     3361 tggcgttagc ttacaccccg tcgcaaaagg taaaaaagtg gatatgattg actttgtgtg
     3421 tgatttgttg gcacaaggtc gtttttatta tcttgatatt ccagaaaatc aaatattcat
     3481 cgaggaacat agaaagtatc aatgggatgt taaaacaatc aacacagaca agcccgaagt
     3541 catcaaagaa gatgatcata cgtgtgatgc ttttcagtac tatgtaaaag acaatctaag
     3601 gaagttaggt ctcaaattct aggaggtgaa aaccttgatt aatcaaataa tcgcaagcgt
     3661 gaaaggagtg atgcggagaa tgggactatt gaaagcactg aaagatgtaa aagaccataa
     3721 aaaagtaaat gctaatgatg aagattataa gtatattgac atgtggaaac ggctatatca
     3781 aggccattac gctgaatggc ataatctaaa ttacgaacac aatggcaatc cggttaacag
     3841 acgtcaatta tctatgaatt tgccgaaagt tacagctaag tacatgtcta aacttctttt
     3901 taatgagaaa gtgaaaatca atattgatga taaagccgct gaggaattcg tgcttaatgt
     3961 attgaaaacg aacggtttta ctaaaaatat ggagcgttac atcgaatacg gcgaagcgat
     4021 gggcggtttt gtaataaaag tgtatcacga cggaaaaaag aacgtcaaag tttcattcgc
     4081 gacagccgat tgtatgtatc ctttgtcaaa tgatagcgag aatgtagacg aatgtgttat
     4141 atctaatagt tttcataaaa acgataaata ttatacgttg ctcgaatggc tcgaatggaa
     4201 aggggagaaa gtagaagtat acacagtcac aacggagtta taccaatcag acgacccgaa
     4261 cgagcttggt acaaaagtaa gtttagcgtt actgtttgat gatattgagc ctgttgcgcc
     4321 attgtcaaag tttacacgtc cgacatttac ttatatcaaa cctaacattg cgaataacaa
     4381 gaatctaacg agcccgctcg gcatttccat ttatgctaat gcattagaca cattaaaaac
     4441 gcttgatttg atgttcgatt catactatca agagtttaaa cttggcaaaa agaaagtatt
     4501 ggtgccttcg agcttcgtta aaacggctgt taacctagac ggctcaacca cgaattattt
     4561 cgattcaact gatgaagcat tctttttata tcaaggtgac caggatgcag atggtaaatc
     4621 agtaaaagat atatctgtag agattcgttc aacggagttt atcgagtcta taaacgcaat
     4681 gctacgcatt tatgcgatgc aagttggatt atctgctggc acattcactt tcgatgaaaa
     4741 cggcttaaaa acagctacag aagttgtaag cgagaagtca gaaacctatc aaactaaaaa
     4801 cagtcattcg caattaattg aacaaggcat aaaagaaatg attgtgagca ttcttgaggt
     4861 cgggaaattt atcgaagctt atagcggcga tatagttgag ttagacacga ttacagtcga
     4921 ttttgacgac tctatagcgc aagacgaaga tacaactatc aatcgttaca caaacgctaa
     4981 aaatcaaggt atgattccgc taaaaattgc tttacaacgt gcttggaata ttactgaagc
     5041 tgaggctgat gagtgggctg aaatgttagc gaaggaaaaa caagcggaaa tgcctaacaa
     5101 cgatatgact gggatattcg gcgaagagga gtgatataga tggcactaac tccaagacaa
     5161 ctcgacttgt ttgtgcaacc tgttgttgat gtttacacaa cgctcgaaaa tgaattgttc
     5221 actcttattg ttcgccgatt gaaaacaaag aaaaatatca gcgcagataa tgtgcttgct
     5281 tggcaaatag aaaaacttaa tcaagttcat gcactagatc agcaaatgat tgaacgaatt
     5341 tccaaagctt ccggcgtttc agctaagaag cttttttcta ttgttaaaga tgcgggatac
     5401 agcgatttaa cacaagtaga taactatttc agtaaattag ctgaaacagg cgctgtgttg
     5461 ccactagtaa gcgatgggca aacgatagtc gataaagtaa tgagaagtta ttttaagtta
     5521 gcacaaagca actataatcg cgtcaatcaa acgatgttat cgcaagcaag acaaatctat
     5581 tcagatatca ttcacgaaac gacacagagc gtcttagctg gtttaaaaac acatagacaa
     5641 gcattagcgg aaacagtaac taaattcgct gaaaatggcg ttcctgcgct tgtagataag
     5701 gctaataaaa gatggacacc agaggcttac gtccgaaccg ttacaagaac aaccgtcaac
     5761 agcgtttata acagcgttga agatgagcga atgaatgaat atggcgttga tttagtgcgt
     5821 atttcgcaac atgtaggagc tagaccaacg tgttcaattg ttcaaggcaa agtcatctgt
     5881 ttgttatctg ttgaagaaac aaaaacgaaa tacggcaata aatacatgtc tatttactcg
     5941 ccagagctta gatatggtta tggagatggg attttcggtt gtaattgccg tcaccatcgt
     6001 tttgctttcg ttgaaggcat taacattgca ccaggcgaga acgagttaat agacgaagaa
     6061 gaaaacaaac gcgtttatat gttgagtcag caacaacgat tgatggaacg cgacataaga
     6121 gcagctaaac gcaagctgtc agctgccgaa gaattaggcg atgaactaac agttaaaaag
     6181 gctaaacaag ctgttagaac gaagcaaagc aagctaagag catttgtaaa aacgcacaat
     6241 ttaacaagac agtatagcag agaaaaagta tatgcctaac attcgacctg aacgaaagtc
     6301 gttaaaagtc ggctctcgtg atcgtatcac gtaaaaacaa cgtaggagga ataagaaatg
     6361 gaaagagact ttttgaagga attaggcttg gaaaaggaaa ctatcgactc tattatggtc
     6421 gaacatggta agtcgattca gaacgaaaag gacaaggtaa catcagcgga agcagaaaga
     6481 gacgggctta aaagccagct tgcgcaacgg gacgatgata tcgaagcttt aaaaactgat
     6541 tccggaacga gcaaatcttt aaaagctcaa ttggaaacac tgcaagacaa ttacgaaact
     6601 ttgaaaaaag attcggaagc taaattagta gaaactcgca aaggtgcagc acttgattta
     6661 gctttagcaa atgcgaaagc aagaaatccg aaggctgtaa aagctttact ggataacgac
     6721 aaactagaac tgacagatga aggactgaaa ggccttgacg aacagctagg agcattgcaa
     6781 gaaagcgatg cttatttgtt tgctcaagaa agcgaggcgg ttccgaaatt tggattcagt
     6841 ggcaatccaa cagctccggc tggtttcagc ggttcgttga aggaaaattt aaaatcagat
     6901 tcatttaatt taacaaaatt tttaacggaa aaaggagaga gtgaataatg ggaaatgaaa
     6961 tcacaaaatt attagacgta gtaacaccag aggtttttaa tgcgtacatg gataacttca
     7021 catctgaaaa atcagcaatt atccaatcgg gaattgcagt ggctgatcca agcgttgcgc
     7081 aaaatattac agcgggcggg ttacttgtta atatgccgtt ttggaacgat ttagacggcg
     7141 aagacgaaac tttaggtgac ggtgaaaaag ggctagaaac aggtaaaatt actgctagcg
     7201 ctgacattgc tgcggtaatg tatcgtgggc gcggatggtc agtcaacgaa cttgcggcgg
     7261 ttatttcggg agacgaccct ttagacgctt taatggggaa aatcgcttct tggtggatgc
     7321 gtcgtgagca aactgtacta atttccgtgt taaatggact gtttgctaaa aacggtgcat
     7381 tggcaagttc ccacttgcta tcaaaaccaa catctgcaat ttcggggaat ttagtattag
     7441 atgcaaaaca gcttcttgga gattcttcgg atcgtttaag cttaatggtt atgcattcag
     7501 cggtttatac agccttgcaa aaacaaaact taattgcatt tattccaaat gctcgtgggg
     7561 aagtcaatat cccaacttat ttaggatatc gtgtagttgt agacgacgga gtgccttcca
     7621 caggaacagg agcagcaaaa gtatacactt catatttatt tgcaacaggt tccatcggaa
     7681 gaaacacagg gaacccagct aagttaacaa catttgaaac agctcgggat gcctctaaag
     7741 gtaatgacca agtgtttact cgacgtgctt tcacaatgca cccatatgga gttaaattta
     7801 aaaatgcagt tcgtgatgct aacgaaatca ctccaacaaa tgcggaccta gcaaaagctg
     7861 gaaattggga aaaagtttac gaagacaaac aaatcggtat tgttggtatt cagcatctag
     7921 ttgaagaatt accagctagc ggagcatgat aaaagggggc gaatattatg ccttacacga
     7981 cactagaatt ttatactaac gagtatgcgg gggagcattt ggaacaggat gaatttgaca
     8041 aactgttaaa gcatgctgaa agaaaaattg attcagtgac attttaccga atacgcaaaa
     8101 gcgggattga atcgtttagc gaatttattc agcatcaaat acagttagct acttgtaatc
     8161 aaatcgagta tttcaaagag gcgggcggaa caagtgagtt agctgtttct aagccggata
     8221 acgtatcaat cggaagaact tctattagtg atagtaattt tgcatcaact gctacatcac
     8281 ttaatagcgg attgattggt agcgatgtaa ggtcctattt agcgcataca ggtcttcttt
     8341 acaacggggt aggtgttcgt taatgaaagt agtaaaaccg ataacaaatg cccctccgtt
     8401 gcctcttgac tggctaattc ataacattag ttatgaagcg tataaagaag aagatagaca
     8461 taatcaagtc gtttatgaaa aaggcattga gattgaacat gttcgtgttg atttctcaaa
     8521 atcaaatcaa atcgcgggat tatccgatag tgatagatat gacgcggtta tctttattga
     8581 tgcagtgaac agcatgaacg tgccagctga ttttataagt agatcgagaa tttttttctc
     8641 tggaaaagct tataagattg tcaaagttat accttgttat gcgacctctg aaaatgtgca
     8701 ccattgggag atagaggtgg tttgatgccg attaaagtta atattgacct ttcaaaagcc
     8761 aaaaagaatg taaaaaaagc caaggaaggc gcacaattcg ctttaattaa tcaagccgct
     8821 gccgatattt ctttgtatgt cccctttttg gagggtgatt tatcaaatca atacgttatt
     8881 atgaacgaca aagaaataat gtggacatct atttatgcac ggagactcta caacggaata
     8941 aacttcaatt tcacactcac acatcatccg ttagctggcc cggaatggga ccaacgggca
     9001 aaagtagata agttagaaag ttggatagaa gtagcgcaaa aatcggttga ggagggacta
     9061 taatgtcatt agatttttta gatagtgtta tggatgctat cgaaaacaac gtcgatttaa
     9121 aagatatgaa attaagaaca gcgatattaa aacccgagtc aatcgctttg ctactgactc
     9181 caaataacga taaacaaggt tatcaagacg gctcttatga gcggtctttt tcttttaatc
     9241 taaacggatc tagcaagcaa gaaatgaaag ttttaggtgt tttgaatgca attgctgctt
     9301 attttgataa gacagaaata gagagtattc agagcttaaa taacagcttt gtgctagaag
     9361 acaaagaaac aactagtgtg ccgaacctcg tttcggcgag cgatgatgga acattcattt
     9421 atagcgctag tttcaaaatc aaattatata ttgaaagcga ggaaaaataa aaatggctag
     9481 aattaaaaat gcgaaaacga aatactttgt agctgaaatt gttgatggtg cgggcgagcc
     9541 agtatggaaa cggctgtcaa aatggattac aaacgtgtca gacgatgggt cagataacac
     9601 cgaagagcaa ggcgattatg acggtgacgg caacgaaaaa acggttgtgc taggttactc
     9661 agaagcttac acattcgaag ggacacacga tcgtgaagac gaagcgcaaa acttaattgt
     9721 cgctaaacgt agaacgccag aaaatcgcgg aattatgttt aaaatcgaaa ttccagatac
     9781 tgaaacagca attggtaaag cgactgtttc ggaaattaaa ggttccgctg gcggcgggga
     9841 tgctacggag ttcccagcgt tcgcttgccg tatcgcttat gacgaaacac caaaagttac
     9901 aaaaccctga ggagagcccg tccagcgtcg aagtggacaa ggcgactatt acgttaaaag
     9961 ttggtgaaac atccactatt actgcttcag tattacctgt cggagcaagt caagaagtaa
    10021 cttttacttc ttcaaatcca ccaaaagcaa aagtaaatgc tagtggagtg gttgaaggtg
    10081 tagcagaagg aacagcaaac ataactgttg catctaaagg aagcccttct atcaataaag
    10141 tagtacaagt aacagtggaa gcagcagatt aataaataaa gcccttactc aatgtagggg
    10201 cttttaaatt ggaggaaatc atacatgaca caaaacaatg taattaatat tcaattagaa
    10261 gaatcatatc aagagtttca gcttggcacg gaactgttta gagttggttt aggtgatgaa
    10321 atgcgccgca aatggattga agcagatgag aagtacaaga agaaactgga aaagctaaat
    10381 aaatacaaca ttgataatac agacgaaatg agttcagaag aatactttac attagaagaa
    10441 gatgtaaaag aggctttaac tgaagcatat gcaattttat tggatgacga aaaagcattc
    10501 gataaatgtt atgcgcaatg caaagatatt ttaaaaatgt accaagtata caatcaagtt
    10561 gcagaaatca ttgtcggttc agtagaaaaa caacaaaatg aaattcaaaa gaaatataaa
    10621 gcaaaaatga ctaaaaaagc gaagtgattt aaatgctttc gctcgctttt ggagttaacg
    10681 atatttacga atacgagggg aaagagtata agctcgattt agcttttgac aacgttctaa
    10741 gagtgattga tttaacggaa gataatagtt tatctgatgt gttcagagct aacctcgcaa
    10801 ttgatgtgct ttttgctgat gatatgcctt ggccacgttc aaatgaggaa gacaaatacg
    10861 cgaacattga agaaaaatcg ttggtgctta ttgatatttt cactaattat attgttaaag
    10921 aaaatgacga tggtttgctt tatgatatcg acggaaacaa gatgccaagc gctacaaaca
    10981 acaatgacga agcggaagaa attgcttcat attcattaac gcaagatgcg gattatatct
    11041 atgcttcttt tttacaagac tacaatattg atttattaga tagtcgcggg aagatgcact
    11101 ggtataagtt tagagcattg ttagaaagtt tgcgtgatga tacaacaatt aaaacgataa
    11161 tcggcattag gcaagcggaa ttaccttctg gaaaaggaac agaaaaagaa cgaaacgaat
    11221 taattaaact gaaaaacaga tataagttaa aagattagag gtgagaacat gagtgatgga
    11281 tcagtagtaa ttgagattag tttagacgat aaaaaagcag acaaacaact tgatgctttt
    11341 gaaaaagatt tggaaaaagc aggaactaac gcgggggcgg cattagataa agcatataga
    11401 gaagcggttt cagatattgc tagtcaatcg aaacgattaa aagacacgtt tgtaaatgcg
    11461 tttaaatcga tgggaagcgc tggctcaaat gctttaaaag ctagtttgaa ctttatgcgt
    11521 gagttgcctt caaatgtaca agccgcacta tctaaacttg catcaacagt aaaaactggg
    11581 ttcgtaaacg ctgctaaagc atctattaca gtgataaagg aacttggaac aagtatcaaa
    11641 aacacagcag ttaatatcaa aaacggcttc ttttcaattg ctaagacagt gcaaagtagt
    11701 attgtgtcag ctgttaaagt atcaattaat gtcattaaat ccatccctag cgcaattaaa
    11761 agtgctggaa tcagtattaa atccgcatta gtaagtagtt tgcaagcagc taaatcggct
    11821 gctatttctt ttgctcaaac tactgtaaaa gttattaaaa gtattccagt agctgctaaa
    11881 acagcggcta cagcagtgaa aaacagtttc gtagtagctt acaaagcggt ggtagttgct
    11941 gcttatatga gcgtaaaagg aactattagc gctgtgaaag ctattcctag tgctacaaaa
    12001 tcagcagcgt tagcagtaag tagcgcaatg aaaacggctt ttagcgctgt agcaagcgcg
    12061 gcgaaaacga caggaacaac agtgaaatca gcattaaaaa caggatttag cgctgtgaaa
    12121 tccggagcga aagcggctgg ccaagctggc atttctgcat taaaaggcct aggaaacatt
    12181 gcgaaaagca ctggctcgtt aattaaaagt ggattagtaa gcggatttaa cgcagctaaa
    12241 gcggcggcaa aaggtgcagg cgctggaatg cgtgaagcgt taaaaaattc ggttgaaaag
    12301 cccgccgaac aagctcgttt tagtcttctt aaattagcag cggcattagg acttattgcg
    12361 gctactaaaa acgtcgtagg cagcgctatt gggcgtgttg atacgattga tactgcgact
    12421 aaatcgttaa ctgttttaac tggttccgca aaagatgcac agttagttat gacggattta
    12481 accgccgcta tcgacggcac accaattgcg ctcgatgctg tcgcattagg cgctaaaaaa
    12541 atggtagcag cgggtatgaa agcagcgaat gtaaaacctg ttttcacagc tattgctgat
    12601 gcggcgtatg gcgtcggaaa tggttcagaa tcaattgacc agatgacaga tgctatctcg
    12661 gcattgcaag cgagtggcgt tgcttatgcg gatgatatta acaggctagt tgacgcgggc
    12721 gttcctgcat ggcaaatttt agcaaattcc acaggtaaat ctgttggaga aatgaaaaaa
    12781 tatgtttccg aaggatcttt agaatcaaca aaagctatcg caatgttgac aaaaggcatc
    12841 gaagaaggaa caactggaat ggctgggaat actgccaaaa tggcaggtct agcaaaaaca
    12901 gcaggtaaca ctatcagcgg ttcatttgca aacatgaaaa ccgcagccgt taagagcctt
    12961 gctaatatcg ccgaaaactt aaaaggcccg attattcaag cgctagatgt tgctaaaaac
    13021 gcatttaaac agtttgcggc agtaacagca agtcctgaat tccagaaaaa actttctgat
    13081 ttaatccaaa aaattaaaga gtttatacct gttttaatcg aatgggcgcc attgttggca
    13141 aaagtagccg ctggatttgt ggcttttaat attattagta gcgtattttc aaaagtagct
    13201 aaactagcag gagcgataaa aagtttgacg tctagcgggt cactactttc agttgtagtt
    13261 aatacaatta aagggtcatt cgttaaatta gcaggaacac tcggctcaac aactgctgct
    13321 ttcggcgttg ttgctgcggc ggttggcgca gtgatagctg ttatctatgg aatgtatacc
    13381 gcttttaagg aaaacacggc ggggataaaa agctttctat ctggcatgtg ggaagcggtg
    13441 aaaaactcat tcggcaagat aatagatgtt ttcaaacaaa tagtatcagc cctaaaaccc
    13501 gtcggaagcg ggtttaaaga catattgaaa tatatcggcg tgggggcgtg gattgtactt
    13561 ggtttcgctt tagcggctgt cgttgatatt attcaagtgc tagcacgaat agtgttagta
    13621 gctattaaag cgctacaggg gctgtattat gctataaaag cagcatttca agctctacat
    13681 tgggatttga aaggtgctaa gaaaagctta gagcaatcaa aagatgcgtt tgtcgaagca
    13741 ggttcagcaa taaaagatgc atttaacaaa gataattatg cactgactgg aacagttgaa
    13801 gcattcaaac aaatgggcgg agaagccgaa aaaacagcaa agaaaactga aacatccggc
    13861 aagaaaataa aggaaacatt aaagcttgta gaaacaactg ccaaacaaac tgaaacaact
    13921 gtttcgaagt cgaatcaagc aatagatacg atgctgaacg gcggagttga tcagtatgga
    13981 aagaaactta gtgaaaaaac tgagtcattc ttaaatgcgg ctaaagacct ttacgaacaa
    14041 tatcaagaag caactaaaaa gtctcaagat aaatatagcg tagctatgga aaaggctcag
    14101 agtctcgaag gagataagcg taaaaaagct atagcagatg caaataagac tttagtagac
    14161 gaaacaacaa agaataatag cacgttacta actttgcaaa gcgattattc aaatatgcta
    14221 aaaacaaatc gttgggctga cgggcaagag ttaactgctc aacagaagaa gtttttacaa
    14281 caacaaacta ctgatattca aacagagtta gcgaaacaaa atcagctgta tgttgaagcg
    14341 aacttattgc gactagaaca aggtaaaagc ttaaatgaaa aggaaagaaa tacgagctta
    14401 gaagttcaaa agagcttgta tgaagaaaag aaaaaagctg ttgaaactgg cgagaaatcg
    14461 cttgctgatt tgaaaaagaa aaaagcggac gcttcaactg aaactgaaaa agcaaactat
    14521 caaattcaaa tcgacgagca aacgaagaag aacaagacgc tgtctacaaa cttaaaaaac
    14581 tgggcaactg aaatgaacgc aataatcgca aatggaggca ctttaaacgc tgaaacattt
    14641 gcgaacggat tatctcaact tggaaatatt agtgacgaac agttgtctgc gttgtggcaa
    14701 aattttgttt ctacaagcac ttcaattgat aatacgttgt ctggtttagc tgcaatcatg
    14761 ggtcaacgcg gtggagaagg tgttcaggcg tttgttacag cacttcaaag cggagattat
    14821 acaacagctg cattaaatat taataacgat gttatgaata ctctttcaac tttgccaaat
    14881 ggcatgttcc aaaacgggca aagtggcaag gaccaattta tcactgcgat taaatcaggg
    14941 gattttcaag gagctggcaa atttttactt gatggagtga agttaggagc atctcctcta
    15001 ccaggtgaga tgaacaatat cggtaaacaa ggcggaaatg caaacgcgga cggcttaaag
    15061 agtacagccg aagcaaataa aagcgctggt gccgaactca aaaacaatgc aaaaaatggc
    15121 gcttttgacc caaatttatt caaaatgaca gggtcaaata atgcatccgg ttttaatagt
    15181 ggtattttgg acggaaaagg taatgcattt tcggcaggca ctggcattgg caattctgct
    15241 aaatctggtg ctggttccgt tgattccagc ggagttggtt ctgattttgc atctggatat
    15301 gtgaatggta ttttgagcgg tatgggcgct gttggagaag cggcggggtc tttagctaat
    15361 aaagcgcttc aagcggtaaa agatgcgcaa aaatctaaat caccttccaa aaaagcaaaa
    15421 aaactaggtg gagacttcgg ctctggttac tcattaggta ttgccagcaa gacgaaagca
    15481 gttaataaag ccgcaagtaa tctcgttgct ggggcgcttg gaactgaatc gcaaatcaaa
    15541 aaactatcca gtacgttgaa agacaaaata tcctcagcga ttgacgcggg attgcattct
    15601 aagaataaga gtcgtggtca actcaaacaa gctaaagcat tgaatagcat tgaaggttac
    15661 attgttcaac aaacaaatag attagctgca acagctaaga aacgtgataa agtcgtcgct
    15721 caattaaaag ccgctaatac taaaatggcg gacttgacga aacaaagtaa agagtatgcg
    15781 gcttcaatca cggaaaaaat gcaaagctat ggatctatta gcaacgtaga cgcagaaaac
    15841 ccgcagtcaa tacaagcgga aatgcagaaa cgcttaaaag aaatcaaagc ttttcaagcg
    15901 aatgtggaaa aattgcgcaa aaaaggcgtt agtaaagaca ttataagcga catcttagaa
    15961 tcgggagtag aaaatggttc atcgtatgcg caagctcttg ctaaatctga tgctaagact
    16021 atcaaagcga ttaatagcac tcagaatcaa atcaattcag cgtctaagtc aatgggtaac
    16081 acagcggcta atgcgatgta tagcgctggt attaacgcgg cgaaaggtct aataaacgga
    16141 cttaacagtc agaagaaaca actagaaaac acagctaaga gcatcgctaa tacaatcact
    16201 aattcggtga aaaaggcgct tagaattcat tcaccttcgc gcgtggccat cgagcttggg
    16261 aaattcttta ctgatggact tggaaatggt gtattagctg gcgctaaagg tgcggtgcaa
    16321 tcaactaaca aaatggttga taaagtagta aacgctgctt ctaatttgac cgttccagct
    16381 ataactttgc cgaagatttc cgcagaaaaa gcgctgggcc taaaaagtgt tgatctaaac
    16441 agaactatta cagttaagac gattattgat aataagacaa aagagtctag caatgcagat
    16501 ttaatcaagg caattaaaga gtccggggct aaaccagtca ttctaaattt agatggcgaa
    16561 gtattagcta acaactctaa taatcgaatt ggcagcatga cagacttagg actatacgga
    16621 ggtggcttac tttgaacaaa aaaacagatt tatatttaat gcaagcgaat aaaattatca
    16681 agttaaacga aaaacataac tttgaaataa gtgaagtaag tcgcgctagt cctcaaatta
    16741 tcaataatta tactagctat gagtttagcg acggcaatcg ttcgagtgat agtaatttcg
    16801 atagcttcga tattgaattt acttgcagat tcaaaacaaa tggcaatatc gactatcacg
    16861 ttcgacttga tgaattattc gaggatattt ttattagaaa agaatactac attttccata
    16921 cgaaaacccc gggaaaaaaa tattgcgttc atccagcacc tttcgatatt gataggaaag
    16981 gtgctgggca tgcgcagttt acgttaagat ttgaagtttt caaaggtttt agcgaatcgt
    17041 taggcactag cctttcgcct tttgctttca gcgagggcat ttggcaagcg ggacaaggca
    17101 ttgtatcaca aaattataag tataagcaca catcaaacag atttattgtg tataacgcgg
    17161 ggagctttga tattgaccct agaatgcacg atttaagaat tactattaag aattgtcgaa
    17221 gtgacggctt actaacaatt aacaataaaa gcactggtga aaaattcgta ttcaatgaga
    17281 aaatctacgc ttatgacaca atcgaactgg acggcagtaa catcttgaaa aacggagtgc
    17341 gttgcgggcg gaaaactaat ctcggtctta tttcgttatt atccggcgga aatgaaatcg
    17401 aaatcgagaa tgtaagcaat atcgaaacaa cgtgggattt tccgttttta tataaatgat
    17461 ggtgggtgag aatatggaca tatttgtaag tgactatgaa aagcaataca aagagatttt
    17521 aacaggcttt gaccctacta cattttcaga aacgtgggtc gaaaatcagc aatggcaact
    17581 agatttttat gtagagaaaa caagaaataa tcaagatgtt ttcgacttat taaatcatga
    17641 aagctctgtt tatctggatg gccaagaatt tgttgttaag cagctaaaac gcggcgcagt
    17701 tgggaaaata gtttattcag aagtcacagc aacgcatatt tatttcacga tgcaagatga
    17761 ctatcagtac aacgctattt cgggttctaa gagtgcaaaa gattgtttga cacatatttt
    17821 cgcagctgat aaacaaggtt ttagctttga actcattgac aaaaacaagg ttttagaaaa
    17881 tattacacaa gaaaattttg ggaatggcaa tttactaaag ctagttcaag aagtgttgga
    17941 agattataag cttgttatgc tagcagacaa taaacgatta acatttattc cctctgaaga
    18001 ttacggagag catacagaaa acgaaattcg ctacaataag cacacaaacg aagtcgattt
    18061 tgatattgat acgttatcct taagaactca aattaagggc tatggaaaag tcgacagcaa
    18121 cggaaataac tactttccgc cagttacttt taccagcccg gaatcggcta aatggggcgt
    18181 gcgaattcaa gaaccgttat cagacgagcg ttatacaact tctagcagca tgctaagacg
    18241 tttgaagctt gaactacaag actatccagc gacgactgga aatatctctt taaagcttaa
    18301 atacgaatgc ggaaaaggcg attatgtaat gtttgtttat gaaccgctgg gccttttata
    18361 cgaagttcaa atagtcgctt ataagaaata catttttaca aacaaaccgc cagaattgac
    18421 gttatctaat aacaaaaaaa caatggtttc tatcatggtt caactagcaa aagcaattaa
    18481 gagaggagcg aaatagatgg atttaaaaaa atggcaagac ccactcatga actcagaact
    18541 acagcaaaac tataacgata atttagtaaa actagctgga agccttgaaa aagctaatca
    18601 agatatgaca catgttaatc agcgcatatc taacttagtt attaaatccg gcgggaatga
    18661 atcgaacgaa gtagtagacg cacgcgtttc ttctctggtt ccagaaactg aattcacaac
    18721 attaaacgat agaataaatt acgcggaaaa tgctttaata acaggtgtcg gaaagctttc
    18781 aacgaatgtt tttgatctaa tggataaata caacgatata gatactattt taaagcgttt
    18841 atatggctta gatagcagca atattgaaat atttgtggat gatgcaagag gcgatgatat
    18901 tgcaggaact ggtgaaattg atgcaccttt taaaacgata aataaagcag taatgacttt
    18961 gccccgtgta ttgaatagta actctgtgaa tatctggatt gttcctggtc ggtataatga
    19021 agatgtcgtt attccgccaa tcatgggagg ggatatctac attaggtcta caaactttga
    19081 aacagtagac cctaccagta gcaccggatg ccaagttcga agtatttctg cgacaggaag
    19141 taacggctat ttatatattg ctggtttaga agaaacgaac acggcaggca caacgaaaaa
    19201 ctacttcatt aaagcgacgc gatgcggatt tgtaaggatt acaaaatgcc gaatggcctt
    19261 caatactaag gcaatagacc cgttcactgc ggtttttatt gatgcttgtt ctgctgatgt
    19321 caacggctgt tattttgcct cacaaaatgt tgatgttcgc ggttataaca ctgctagagt
    19381 cgaggttcag aatatcgtcc atggcgcaaa aagtgcgatt ggtttgtatc ctcaaagcgc
    19441 cgatattttc aatctcaata gcgggacttg ggaagctgat acgcctacga aactgagtgg
    19501 cgggggagtg gttagaacat gactgaaaac gttattcata aaaatggtgt atatgatttt
    19561 aacgtcacaa cgcaagaaga taaaccactt caaaaatctg ttttttatac gcaagattct
    19621 ggcggaacag ctagacttat ttttaatata gataaagata atcaagattt agtattatcg
    19681 tctgctgctg aattagagct tgcaatgatt ttagcgaaag gaacagagtc agagagtaag
    19741 tatcttgtga aaccaactat tattgatggt gttaggggaa ttgcagaata ctcacttaca
    19801 gactctcaaa tagcacacgc tggcaatgct attgctgaat tgtatataaa atacaaaaac
    19861 agtcaagcga tgcgggtata taaattcagt tttgagataa aaaaagcatt aatagatagc
    19921 gactttttcc cagtatcaga attttatgtg gagcgctggg atgattacga aaaaatattc
    19981 gatgaatcgt tcgagagatt aaacactaaa ttagatgacg ttgataaaaa agcagatgat
    20041 ttaaaaacac aatttgatga tatgcagcca tcgcaattcg cacaaaaaac agacttaaat
    20101 gcacatgtaa ataatgcgga tattcatgtc accgcagcag ataaaacgaa ctggaattca
    20161 aaagaaacag catctagcgc acaggctaaa gcagataaag cacttgctga tgcaaaaact
    20221 tttttcgaac tagctagtgc ggtgcaaagc gttactttga cgccaaaaaa cggatttgtt
    20281 gcaagtcagc ctttagtcgc tcgatacatt aagtttggca accggtttct agttattgtt
    20341 agcggaattg taggaaaagg gaccgggaac gggacaggta tatgtgcaac att
//
LOCUS       DASDYK010000041        20232 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.041, whole genome shotgun sequence.
ACCESSION   DASDYK010000041 DASDYK010000000
VERSION     DASDYK010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 20232)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20232)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20232
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.041"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..388
                     /locus_tag="U0308_001482"
     CDS             <1..388
                     /locus_tag="U0308_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2316449.1"
                     /translation="ELRLVCDTDVSLIFIDREYFLNYATNKPSYMEWLLEETLINNKN
                     LYNELIKYDLSAEERIVYALQYLCDKLEIESENGYQQIPKYINKIKMAKYGKISRKQL
                     NEKIILLLDKEVLKEKKGRFYIKKSA"
     gene            complement(415..1635)
                     /locus_tag="U0308_001483"
     CDS             complement(415..1635)
                     /locus_tag="U0308_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003739666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEM2316450.1"
                     /translation="MKKVTLIFGIYTFILGIIVGIIAALFLAMVHFATTFLWDYLPNQ
                     FDFSWYYPLLIGLIGSFFVGMVQLKFGDYPRSMHDNVAEAKKTGRMEYRKVLFPTILS
                     AWIILTFGASVGPEAALIGIVGGATTWIIDHLKLSMAHKEELVSLSVGAIISSIFHAP
                     FSGLAEEIDESSQAKKIPKNSKLVLSLLISFSALGSFLWLKSFLKMPASIFAIRLPDM
                     GWSWWFILLFIPMIILGWLFSVYFQQLQVYIAKAASVIKNKMVAAVIGGLSIGLFGII
                     SSFMLFSGEHQLIELTTTVQNYSIPFLLIIGLLKPVLVAICLATGWNGGAIFPAIFTS
                     TIMGYIATFWMDGSTGFLITIFVTASCTKIIGKPVLTASILLFIFPLQFFPFILLTAF
                     IVNRNWLVNFKKTA"
     gene            complement(1747..2220)
                     /locus_tag="U0308_001484"
     CDS             complement(1747..2220)
                     /locus_tag="U0308_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent PAP2 family protein"
                     /protein_id="HEM2316451.1"
                     /translation="MSIFTNTPLIASIIAIVFAQVVKVPIHILVYRKFNLGLMFSTGG
                     MPSSHSAAVTALMTTLAIEYGLDSPYFAIAVVFGIIVMFDATGVRRQAGEQAVVLNKL
                     VTDFQDFVEHAKGLAAPEQEEKTKHLKELLGHKPMEVFFGALTGIAIGFILEMFM"
     gene            2348..2719
                     /locus_tag="U0308_001485"
     CDS             2348..2719
                     /locus_tag="U0308_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEM2316452.1"
                     /translation="MGLQETIGIEIVSVEKGKAVVQLEVTEKVHQPFGYLHGGVSVVL
                     AEHAASIGAAKSIEPDEIVFGLEINANHLASKQEGLVTATAEAIHLGKSTQVWEIKIT
                     DETEKLICISRCTIAVKKKRK"
     gene            complement(2764..3357)
                     /locus_tag="U0308_001486"
     CDS             complement(2764..3357)
                     /locus_tag="U0308_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit G"
                     /protein_id="HEM2316453.1"
                     /translation="MNVIIEIIISIMILIGGLLSILAAIGVIRLPDVYTRTHAAGISN
                     TFGVSLLLFATVGYFFHSGEGFNARVLLAVLFIFLTTPVASHLINRAAYDTGVPLAIR
                     IRDQLRSVKKDDIKKKKNLIIRQEQIEKARQEREELEERMEWERREEKIDEREDQEEQ
                     EREREEQTIEEQSDDSEHEIIEQDESETESDDDKTEK"
     gene            complement(3341..3628)
                     /locus_tag="U0308_001487"
     CDS             complement(3341..3628)
                     /locus_tag="U0308_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter subunit F1"
                     /protein_id="HEM2316454.1"
                     /translation="MIIQIALSIGLLLYSISTFLYLYRILKGPTTSDKVVALDSIGMN
                     LVAIVALLSMFYDTHAFLDVILLIALLAFIGTVSFAKFIEKGKVIDRERDN"
     gene            complement(3625..4104)
                     /locus_tag="U0308_001488"
     CDS             complement(3625..4104)
                     /locus_tag="U0308_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit E"
                     /protein_id="HEM2316455.1"
                     /translation="MAFQLILNIILACLWMFLESSFSFATFIIGFIIGIFLLFFMRRF
                     LGSRFYLFRLFALVKLVFRFLHDLIVSTVHVSRIVLKKDMNIRPGIFRYDTTLETDWE
                     VTMLALLITLTPGTLSIDISDDYKAIYVHSLHVPNIEEEIATIRKSYEGAIMEVFHG"
     gene            complement(4111..5595)
                     /locus_tag="U0308_001489"
     CDS             complement(4111..5595)
                     /locus_tag="U0308_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit D"
                     /protein_id="HEM2316456.1"
                     /translation="MNNIILMPILIPFLGAITLMLLPKKVIIQRVFALIFSGILVVAT
                     LGLVFYIRENGITTVNIGNWAAPFGITMVGDMLAVLLTATTSIVLFCVILYSFYTIGK
                     PREKFLYYPAILFMIVGVNGSFLTGDIFNMFVFFEVMLMASYVLLVIGGTQVQLKATI
                     KYLLINVVGSGFFVVAIALLYSMIGTLNMADISQKITDLNGANTGMISVVAVLFLFVF
                     GLKAGLFPLYFWLPGSYFAPPIPVLALFGGLLTKVGVYAIIRTYTLFFSSLTDFVVPL
                     LGILAIVTIVLGVIGAISYYDMKTIVIYNIMIAIGVILFSVSIMTRESMTGAVFYLIH
                     DMIIKAALFLIVGIVMAITGYSSVKKFSGLMSVKPSLGWIFFIATLGLAGIPPLSGFI
                     GKLLIVEGAFSAGQIVGGIIILLSSLFVLMSLIKVFTKGFWGEKKGVFNLQIPYKKML
                     VPVVILLAISIGYGVFSNAIYPFIEQAVDPLVDPSVYIHAVIKE"
     gene            complement(5588..5935)
                     /locus_tag="U0308_001490"
     CDS             complement(5588..5935)
                     /locus_tag="U0308_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter subunit C"
                     /protein_id="HEM2316457.1"
                     /translation="MELLMSILIGLIFAAAVYLILSKSLLRIIIGTAVLSHGVNLLVL
                     TMGGLKKGRVPILGTPGAGTYNDPLPQALILTAIVISFGVTAFFLVLAYRAYQELDSE
                     SVSKTRGHEADDE"
     gene            complement(5935..6360)
                     /locus_tag="U0308_001491"
     CDS             complement(5935..6360)
                     /locus_tag="U0308_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter subunit B"
                     /protein_id="HEM2316458.1"
                     /translation="MMKTNDVLLRNVTKVVAFIIFLFSLHLFFAGHYNPGGGFVAGLT
                     TAGAITLTLLAYDTKTVASMLNINTIMLTGVGLVFALGTGMIGIFTGDPFLTHKFGHV
                     DLPILGDTALHTATLFDLGVYLVVVGVTLTIIQTIGESD"
     gene            complement(6344..8752)
                     /locus_tag="U0308_001492"
     CDS             complement(6344..8752)
                     /locus_tag="U0308_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit A"
                     /protein_id="HEM2316459.1"
                     /translation="MSFLHLAIVLPFIVALLIPLFYRWTKQVHTGWLVLPIPVILFIY
                     FLTFIPKTMDGATIVSMPWIPRLGINFTVVVDGLSLLFALLITGIGSLVTFYSIYYLG
                     KKKERLSNFYTFLFIFMTAMLGVVLSDNLIVLYLFWELTSISSFLLIGYWYHRERSRY
                     GARKSMMITVFGGLMMLGGFILLHIMSDSFSIREIISNADVISNNSLFIPAMILILLG
                     AFTKSAQVPFHIWLPDAMEAPTPVSAYLHSATMVKAGIYIVARFTPLFASSGVWFWTV
                     SLVGITTLFWGSLNATKKNDLKAILAYSTISQLGLIMALLGVGAASLHFDTLSDDIYV
                     MAIVAAVFHLFNHATFKGSLFMMVGIVDHETGTRDIRRLGGLMRIMPITATIAFIGTF
                     AMAGIPPFNGFLSKEMFFESMVNITQLQLFDASTWGVLLPVVAWVASVFTFVYSMIIF
                     FKTFTGKVKPYLLPKKPHEAPFGLLLPPIILSIFVVGIGLFPNLIAEPILEPAVRAIV
                     PGLSTDFSIHISLWHGFTPALLMTFGVVAVGIVLFLTHKYWKPWITTKVPKALRIGKT
                     YDNGMYYLEQGSYRMTMFIMTGWLRTYLNYMLSAFILMMASVMIFTQALDFNFSSMTK
                     VTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLII
                     ETISVVLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDSI
                     SKYYVDNAYVEAAGRNIVNVILVDFRGFDTMFETAVLSIAAIGIYAMIKLRLTKRGKN
                     DENE"
     gene            complement(9097..10308)
                     /locus_tag="U0308_001493"
     CDS             complement(9097..10308)
                     /locus_tag="U0308_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2316460.1"
                     /translation="MTTRTRNLYILMLANLLMSASMTMIMPFLSLYIETFGDYSNAYV
                     QRWAGYIFGVTFLIAFIFSPIWGRIGDKHGYKGILILTSVGLSICIFLMGFAHSVTYL
                     LILRIFMGVVTGFIGVSNAFIARQTPRNEAGKILGTLQLGGVTGMLFGPLIGGAMADL
                     FGFKDTFTITGIAMMVAALIVAFGVKEIRTEEQKEAAKVVYSRRAVLKQIFTLRVLFT
                     VMVITALIQIANFSVQPLLALYVGDMTQSDNIAFLSGLAFSATGFGNLVMTRKWGQLG
                     DKYGYEKILNILLIMAAVFVIPQAFATNLWVFIFFRFLFGIAIGGMVPCTTAYIRLAA
                     PGVMQGEMLGYNQSARFLGNVIGPILGGTLAGFTGIPSVFLFMSFMFLVAFFILLYAL
                     HSDRKRHVNVD"
     gene            10540..11124
                     /locus_tag="U0308_001494"
     CDS             10540..11124
                     /locus_tag="U0308_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEM2316461.1"
                     /translation="MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENFVT
                     HSKNGYYDGLIFHRVIPEFMIQGGDPDGRGTGGESIWGESFEDEFSTEAFNLRGALSM
                     ANAGPNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEIIEAYKQGGTPWLDGRHTVFGH
                     VIEGMDVVDEIANLPTGMQDKPVNDVVIEKINIK"
     gene            11206..11601
                     /locus_tag="U0308_001495"
     CDS             11206..11601
                     /locus_tag="U0308_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316462.1"
                     /translation="MEKSHPIKINNQLIYGRDKTWLESLHQNTNQLIITVEIDFEDES
                     TLQKMVFNGLIFYSSTELDTYEKSKWSSSWLQSQSNFEIIEQSNLINERVKIRSDYNI
                     QDFKHYRISTYDYIIDVIAKNYQLKEAHK"
     gene            complement(11643..13004)
                     /locus_tag="U0308_001496"
     CDS             complement(11643..13004)
                     /locus_tag="U0308_001496"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEM2316463.1"
                     /translation="MKVIKFGGSSLASGIQLNKVFQLVAEDPDRKIVVVSAPGKRFKE
                     DTKVTDLLIDCAAKALLGEDTSELFESVIARYAGIALDTGMSDEIINQIRADLQATIS
                     SDKSDPDKFLDRMKASGEDNNAKLIAAYFKFKGLNANYINPKDAGLLVTDEHASAQVL
                     PESYDRLFALREREGIIVFPGFFGYTKDGEISTFSRSGSDITGAIVANGAQAELYENF
                     TDVDAVYAVNPAIVKNPKKVLELTYREMRELSYAGFSVFHDEALIPAFHAGIPVHIKN
                     TNNPDSCGTRVVHERENNNGPVVGIASDDGFCSIYISKYLMNREIGFGRKVLQILEDA
                     GLNYEHMPSGIDDLTIIIRENQFGEDTEQTIMSRLKEELNADQVIMQHGISLIMVVGE
                     TMRHNVGITSRASKALSDAKVNIEMINQGSSEVSIMFGVKEEQENTAVRALYNEFFSE
                     VFV"
     gene            13249..13563
                     /locus_tag="U0308_001497"
     CDS             13249..13563
                     /locus_tag="U0308_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2316464.1"
                     /translation="MKNIVLVCAAGMSTSLLVTKMRKAAEERGETCEIEAYSIAEVSN
                     LIDDADVVLLGPQVRYQKKTVDELAAGKIPVDVIDMAAYGTMNGEKVLGQALDLINGF
                     QK"
     gene            complement(13606..14286)
                     /locus_tag="U0308_001498"
     CDS             complement(13606..14286)
                     /locus_tag="U0308_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316465.1"
                     /translation="METLLSFDKVYKDYPSGPSIIHALKETNFEAKKGELIAIVGPSG
                     SGKSTLLSLAGALLTPTGGTISINGKSVGNLSSKEQTALRLEEIGFIFQAAHLVPYLH
                     VKDQISFIGKMAGKSAAELEKDTASLLSQLGISDRANFYPKDLSGGQKQRVAIARALI
                     NQPSVILADEPTASLDTERSREVVELIRNEVVQTSRTAIMVTHDERMLDLVNHVYRME
                     DGILTQES"
     gene            complement(14286..15389)
                     /locus_tag="U0308_001499"
     CDS             complement(14286..15389)
                     /locus_tag="U0308_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2316466.1"
                     /translation="MFLGLRELVYSKLRYILVTGIMVLIMLLSLILSGLANGLAYDNA
                     SSVADNGVPYYVLSKDAQDKLSRSQFPESKLADVKKDANVKDAAVLGQSMQTLKRESD
                     DKKFSVALFGIQPDSFLAPKISDGANIQVTKPDEIVVDSSLKSDGIKIGDVLMDDILN
                     RELTVVGFTENQKYSHAPVVYINIATWQEINPVLYHQKIPQTSTIAIKTENPDKGVTL
                     SDKDLTTIDHKGFLNQIPGYSAEQMTLNMMIFFLIIIGGFILTAFFYVMTLQKTTQFG
                     ILKALGTKTSYLVKSIITQVVIISIISILISVGVTLILPSIMPAAMPFRLSPMTIALY
                     SGLFFLVALFGALLSLRRIAKVDALDAIRGGDE"
     gene            complement(15528..16694)
                     /locus_tag="U0308_001500"
     CDS             complement(15528..16694)
                     /locus_tag="U0308_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM2316467.1"
                     /translation="MSQFDEVIPRIGTNSEKWDGAEELFGRKNIIPMWVADMDFRAPQ
                     PVLDAFQRQIDHGIFGYSTKSAALVEAIIDWNKEQHQFEIDPSALFFNGAVVPTISLA
                     IRSLTNEGDAVLMVSPIYPPFFNVTKATERKVVMSPLIYENRQYRMDFNDLEKRMKEE
                     KVKLFLLCNPQNPGGRCFTKEELVELAKLCEKYQIPIVSDEIHADLVMKNHKHVPMMV
                     AAPFYQDQIITLMAATKTFNLAAIKASYYIITNKDYQAKFAAEQKYATTNGLNVFGIV
                     GTEAAYRHGVPWLKELKEYIYSNYEYVKAALEKEVPEVGVTDLEATYLMWLDCRALPK
                     DEKTIYADLIEAGVGVQMGSGFGHSGKGFVRFNIACPKETLEKAVKLLIQGLKK"
     gene            16848..17201
                     /gene="yugI"
                     /locus_tag="U0308_001501"
     CDS             16848..17201
                     /gene="yugI"
                     /locus_tag="U0308_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein 13"
                     /protein_id="HEM2316468.1"
                     /translation="MSTFKVGDVVSGKVAGIQSYGAFVALDNSTQGLVHISEITHGFV
                     KDIHDFLEVGQEVKVKILDIDEEKNKISLSIRATEEAPKEQPTKKKQVSSSENDEGFN
                     TLRDKLEEWIKKADK"
     gene            17349..17756
                     /locus_tag="U0308_001502"
     CDS             17349..17756
                     /locus_tag="U0308_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM2316469.1"
                     /translation="MKRSIHVQAFVYNEKKDEILVVRDRNLTWAFPGGHVETNQTMEE
                     ALASKVKEQTNIDIEIESILHCKERRATWEHVCTFVFRAKPVGNALLASNDDNVFRVK
                     WIPIPLADDLLAVDQLSLNELVRSEGVLYENYT"
     gene            17858..19210
                     /locus_tag="U0308_001503"
     CDS             17858..19210
                     /locus_tag="U0308_001503"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEM2316470.1"
                     /translation="MTHIKFDYSKALRFFEERELDYLEPAVKAAHDSLHNGTGAGNDA
                     LGWINLPTDYDKEEFARIKKATEKIHSDSDVLIVIGIGGSYLGARAAIETLNHSFYNV
                     LEKGARKTPQVFFAGNSISSSYLHDLIEVVGDRDFSVNVISKSGTTTEPAIAFRVFKE
                     LLIKKYGEEGAKKRIYATTDKAKGALKTLADNEGYETFVVPDDVGGRFSVLTAVGLLP
                     IAVSGVDIDALMNGAAAASKDFDKPELKNNIAYQYAAARNVLYRKGKVTELLISYEPG
                     LQYFNEWWKQLFGESEGKDKKGIYPSSANFSTDLHSIGQYIQDGRRNLFETVIKVDKP
                     RHNLTINKEDVDLDGLNYLAGETVDFVNTKAFEGTLLAHTDGEVPNFVVEVPELDAYT
                     FGYLVYFFEKAVAISGYLNGVNPFDQPGVEAYKANMFALLGKPGFEDKKAELEKRLND
                     "
     gene            19315..20073
                     /locus_tag="U0308_001504"
     CDS             19315..20073
                     /locus_tag="U0308_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM2316471.1"
                     /translation="MLSIERKRAIVQYVKSRKIATVSELAKHFEVHEATIRRDLTSLE
                     KDKKLKRTHGGVMIEEKVVSEPNWKKRSEVRYEEKQRIATLAATMVKDGDTIILDAGT
                     TTGHIATALKDRSKLTVITNDINVASIMRFSPSKVIVTGGVIYPETFILNGMITSGTL
                     QSIHVHKAFVTTPALDIDKGLMHYDEYLIPAKQQMLHSADEVILVTDHTKFGRISLYK
                     YAALDEISSIITGKEIDPVLKEQFEEKGMQIYTT"
BASE COUNT         7004 a         4212 c         3570 g         5446 t
ORIGIN      
        1 tgaattaaga ttagtttgtg atacagatgt ttccttaatt tttattgata gggaatattt
       61 cttaaactat gctaccaata agccttctta tatggagtgg cttttagaag aaacattaat
      121 aaacaataag aacctttata atgagttaat taagtatgac ttgtccgcag aagaaagaat
      181 agtctatgcc ctccagtacc tatgtgacaa attagaaatt gaaagtgaaa atggctacca
      241 acaaatacct aaatatatta ataagataaa aatggcgaaa tacggcaaaa tatctcgcaa
      301 acaactaaac gaaaaaataa tacttctcct cgataaggaa gtattaaaag aaaaaaaagg
      361 aagattctat ataaaaaaat cagcataaaa aaactaagga tttctcctta gtttttatgc
      421 tgtttttttg aagttaacta accaatttct attcactata aatgcagtta ataaaataaa
      481 tggaaagaat tgaagtggga atataaataa taaaatagag gcagttagaa ctggttttcc
      541 tatgattttt gtacaacttg cagtaacaaa aatagtgatt aagaaaccag tcgatccatc
      601 catccaaaat gttgctatgt aacccataat cgtactagtg aaaatcgccg ggaaaattgc
      661 accgccattc cagccagttg ctaaacaaat agcgaccaaa acaggtttta acaagccgat
      721 aataagtaaa aagggaatcg aataattttg gacagttgtt gtcaattcaa tcagctgatg
      781 ctcaccagaa aataacatga aggaagaaat tatcccaaat aaaccaatgc tcaaaccgcc
      841 aataaccgcc gcgaccattt tatttttaat gacagaagct gccttcgcga tatagacttg
      901 caattgctgg aaataaacac taaagagcca tccaagaata atcataggga taaaaagtaa
      961 aataaaccac caagaccaac ccatgtcagg tagccgaatc gcaaaaatac tcgctggcat
     1021 ttttaaaaag gatttcagcc aaaggaaaga tccgagcgcg ctaaaagaaa taagaagcga
     1081 taacactaat ttagagtttt tgggaatttt cttcgcttga ctactttcat caatttcctc
     1141 ggctagtccg ctaaacggag cgtggaaaat actggaaata atcgcgccga cactcaaact
     1201 aacaagttct tccttatgcg ccatagataa ttttaaatgg tcaataatcc aagtcgtggc
     1261 accaccaaca ataccaatca aagcagcttc cggaccaacg ctcgccccaa atgttaaaat
     1321 aatccaagcg ctaagtatcg taggaaacag aactttgcga tattccatcc gtcctgtttt
     1381 cttcgcctca gcaacattgt catgcatcga ccgcggatag tcaccaaatt tcagctgaac
     1441 cattcctaca aaaaaactcc caatcaaacc gattagtaga ggataatacc atgaaaaatc
     1501 aaactgatta ggaagataat cccataaaaa agtcgtggca aaatgaacca ttgctaaaaa
     1561 taaagcggca attattccca ctatgattcc gaggataaaa gtataaatgc caaaaataag
     1621 tgttaccttt ttcactgaaa ctcgcccctt ttgtaaaatc tgttgatatc atgattttcc
     1681 ctctaacata aagctgtaaa ctaacgacaa acaaaaaaag ttgactacaa ggagtcaact
     1741 tttcatttac ataaacattt ctaaaatgaa tccaatcgca atcccggtaa gtgctccgaa
     1801 gaaaacttcc atcggtttat ggccaagtaa ttcttttaaa tgcttcgttt tttcttcttg
     1861 ttcaggtgcc gcgagccctt ttgcatgttc cacgaagtct tggaaatccg ttactaattt
     1921 gtttaaaaca actgcttgtt caccggcttg tcttctaacg ccagtcgcat cgaacatcac
     1981 gataatacca aatacaacag caatcgcgaa ataaggtgaa tcgagcccgt attcaattgc
     2041 gagtgttgtc attagcgcag taaccgcagc cgagtgagag ctaggcatac caccagtgga
     2101 aaacattagt ccgaggttaa actttcggta tactaaaata tgaatcggaa ctttgaccac
     2161 ttgggcaaac acaatcgcaa taatagatgc aattaatggt gtattcgtaa atatcgacat
     2221 caaatctctc ctgtcaaaaa gtctattctt attttaccac aatgagctta ttaaaaacct
     2281 tttctagagt ttttctacca actcttatat aataaagtat aaatcaaatt cggaaagaag
     2341 ggaacatatg ggacttcaag aaactattgg cattgaaatt gtttcagtag aaaaaggaaa
     2401 agccgttgtt caattagaag tgacagaaaa agtccatcaa ccgtttggct atttgcatgg
     2461 aggggtttct gttgttttag cggaacatgc agcaagtatt ggtgctgcta aatcaatcga
     2521 acccgatgaa atcgtctttg gtttagaaat taatgccaat cacttggcat caaaacaaga
     2581 aggattagta acagcgactg cagaagcaat ccaccttggc aaaagtaccc aagtatggga
     2641 aattaaaatc actgacgaaa cggaaaaact aatttgtatt agcagatgta ccatagcagt
     2701 caaaaagaaa cgaaaataaa aagcatggca gaggtcaatt gatgaactcg cgccatgctt
     2761 tttttatttc tccgttttat catcgtctga ttcagtttca ctttcatcct gctcgatgat
     2821 ttcatgctcg gaatcatccg actgttcttc aatcgtttgt tcctcgcgtt cccgttcttg
     2881 ttcttcttga tcttcacgct catcgatttt ttcttcgcgt cgttcccatt ccattcgttc
     2941 ttccaattct tcccgttctt gtcgtgcttt ttcaatttgt tcttgacgga taataagatt
     3001 tttctttttc ttaatatcgt cttttttcac cgaacgcaat tggtcacgaa ttcgaatagc
     3061 tagcggaaca ccggtatcat aagcagcccg gttaataagg tgagaagcca ctggtgtagt
     3121 taagaaaata aacaatacgg ccagaagtac tcgagcatta aaaccttcgc ctgagtggaa
     3181 aaagtaacca accgttgcaa acagaagtaa gctaacgcca aatgtattac taatcccggc
     3241 agcatgcgtt ctagtgtaca cgtcaggcaa tctgataacc ccgattgcgg caagaatact
     3301 aagcaaaccg ccaattaaaa tcataataga aataataatc tcaattatca cgttcacgat
     3361 caatcacctt ccctttctca ataaatttgg caaaggaaac cgttccgata aatgcaagaa
     3421 gcgcaataag taaaataaca tccaaaaagg catgcgtatc ataaaacatc gaaagtagcg
     3481 ctacaatggc cactaagttc attccaatag aatccagcgc caccactttg tcagaagtag
     3541 ttggtccttt taaaatacgg taaagatata agaaagttga aatcgaatag agaagtaaac
     3601 caatggataa agcgatttga ataatcatcc gtggaacacc tccataatcg cgccttcata
     3661 agacttacga attgttgcaa tttcttcttc aatattaggg acgtgaagcg agtggacata
     3721 gattgcttta taatcatccg aaatatcaat cgaaagtgtc ccgggcgtta acgtaatcag
     3781 tagtgcgagc atcgtcactt cccagtctgt ctcaagcgtc gtatcatatc tgaaaatccc
     3841 cggtcgaatg ttcatgtctt tctttaaaac aatccgactt acatgaactg tagaaacaat
     3901 taaatcatgc aaaaagcgga aaaccagttt gacaagggcg aataaccgga aaaggtaaaa
     3961 tcttgatcca aggaaacgtc gcataaagaa tagcaagaaa atcccgatga taaagccaat
     4021 gataaatgtt gcaaaactaa atgatgactc aagaaacatc cacaaacaag caagtattat
     4081 attaagaata agttgaaaag ccatctttta tcactccttt atcaccgcat ggatataaac
     4141 agaagggtca acaagagggt caaccgcctg ttcaataaac ggataaattg cattactaaa
     4201 cacaccataa ccaatcgaaa tcgcaagtag aataactact ggcacaagca tttttttata
     4261 cggaatttgt aaattgaata cgcctttttt ctcgccccag aagccttttg taaagacttt
     4321 gattaaagac ataaggacga ataagctgga taataagatg atgattccgc caactatttg
     4381 accagcagag aaagcacctt ccacaatcaa taattttcca atgaagccgc taagaggtgg
     4441 aattcctgca aggccaagag tagcaatgaa gaaaatccaa ccgagcgaag gcttcacgct
     4501 catcaaccca ctgaattttt ttacactaga ataaccagta atcgccatca caatcccgac
     4561 aataaggaac agcgcggctt taataatcat atcgtgaatc aagtaaaaga cagcaccagt
     4621 cattgattcg cgtgtcataa tcgaaacgct aaacagaata acaccaatcg caatcataat
     4681 attataaatc acaatcgttt tcatatcata gtaactaatt gccccaataa ccccaagaac
     4741 aatcgtcaca atcgcgagaa ttccaagtag cggaacaaca aaatctgtta acgaactgaa
     4801 aaatagtgtg tatgtccgga taattgcata aaccccaact tttgtcagaa gtccaccgaa
     4861 caaagcaagc accggaattg gtggagcaaa gtaagatcct ggtagccaga agtaaagcgg
     4921 gaatagtcct gcttttagtc cgaatacaaa caagaacaga accgcgacaa cgctaatcat
     4981 tcctgtattt gcaccattta agtccgtgat tttttgcgaa atatccgcca tgttgagcgt
     5041 tccaatcatc gaataaagta gcgcaattgc tacaacgaaa aatccggaac caaccacatt
     5101 aatcaacaag tatttaatcg tcgctttgag ctgaacttga gtcccaccaa tgacaagtag
     5161 tacataagac gccatcaaca taacttcaaa gaatacgaac atattaaaaa tatcgccagt
     5221 taaaaacgaa ccattaaccc caacaatcat aaagagaatc gctggataat aaagaaattt
     5281 ctctcgtggt ttcccaatcg tataaaaaga ataaagaatc acgcagaata aaacaatact
     5341 cgtcgttgcc gtaagcaaga cagcaagcat atcgccaacc atcgtaatcc caaaaggagc
     5401 cgcccagtta ccaatattca cagttgtaat cccgttttct cgaatataaa atacaagtcc
     5461 aagtgtcgct acaaccaaaa taccactaaa aataagggcg aatacccgtt gaatgattac
     5521 ttttttcgga agcaacatta acgtaattgc tccaaggaaa ggtatcaaaa tcggcattaa
     5581 aattatatta ttcatcatcg gcttcatgtc ctctcgtctt ggatacactc tcgctatcaa
     5641 gctcctgata cgctctataa gcaagaacaa ggaaaaaggc agttacacca aagcttataa
     5701 caatcgcagt caaaataagt gcttgtggaa ggggatcatt atacgttccc gctcccggtg
     5761 taccaagaat tggcacgcga ccttttttca gtccacccat cgtaagtaca agcaaattga
     5821 caccgtggct taggacagcc gttccaataa taatccgtag caaactttta gagagaatta
     5881 agtagacagc agctgcaaaa atcaagccga ttaatataga cattaatagt tccatcagtc
     5941 actctcccca atcgtttgaa ttatcgtaag tgttacaccg acaacaacta agtaaacccc
     6001 aaggtcaaac aaagtcgccg tgtgtaacgc agtatctcct aaaatgggca aatcaacatg
     6061 accaaattta tgcgttaaga aaggatctcc tgtaaaaatc ccaatcatcc cagtaccaag
     6121 ggcgaataca agcccaaccc cggtaagcat aatcgtattg atattaagca tactagccac
     6181 cgtttttgta tcataagcaa gtagtgttaa tgtaatagca ccagccgttg taagcccggc
     6241 cacaaacccg ccaccaggat tataatgtcc tgcaaagaat aaatggagtg agaataagaa
     6301 aataatgaaa gcaactactt tcgttacatt tctcagtaga acatcattcg ttttcatcat
     6361 tcttacctcg tttcgtcagt cgtaatttaa tcatcgcgta aataccaatc gccgcaatcg
     6421 aaagcacagc tgtctcaaac atcgtatcaa aaccacggaa gtcaactaag ataacattta
     6481 caatatttcg tcccgccgct tccacataag cattgtccac atagtacttc gaaatcgaat
     6541 cataaaatgt cgtattatac gctgaaagag agacaagggt aataattaca ccaaccccga
     6601 tactcaaaaa tgtcttcatt gataaccatt tcggcttttc ctcaatatta ctaaactgag
     6661 gaagatgata aaacacaagt agataaagca caacggaaat agtttcaata ataagctgtg
     6721 ttaaagcaag atctggtgct ctagagataa caaagaaaat actaatcgtg tatcccattg
     6781 ctccaagtaa aataatcgaa gtaatccgcg atttggaaaa gacaatccca accaacgtca
     6841 ctaaaatcac tgccgctaaa acaaaatcaa caactgtcac tttcgtcata cttgagaaat
     6901 tgaaatcaag tgcttgtgtg aaaatcatga ccgaagccat cattaaaata aaagccgata
     6961 acatgtaatt caagtaagtc cgaagccaac cagtcataat aaacattgtc atacgatacg
     7021 agccttgttc taaataatac atcccattat catacgtttt cccaattcga agtgcttttg
     7081 gaaccttagt cgtaatccaa ggtttccagt atttatgtgt aagaaacaag acaatcccca
     7141 ctgcaacaac accgaacgtc attaacagag caggcgtaaa gccgtgccac aaactaatat
     7201 gaatcgagaa atccgtagaa agcccaggaa caattgctct tacagcaggc tccaaaatcg
     7261 gctccgcaat taaattaggg aagagaccaa taccaaccac gaaaatcgat aaaataatcg
     7321 gtggtaaaag tagtccgaat ggcgcttcat gcggtttttt cggaagtaag tacggtttca
     7381 cttttccagt aaatgtttta aagaaaataa tcatactata aacaaacgta aacacactag
     7441 caacccaagc tacaacaggg agcagaacgc cccaagtact tgcatcaaac aattgcaatt
     7501 gcgtaatatt taccatgctt tcaaaaaaca tctctttact tagaaatcca ttaaacggtg
     7561 gaataccggc cattgcgaaa gttccgataa acgcaatcgt cgccgtaatc ggcataattc
     7621 gcattaagcc accaagtcgc ctaatatccc gcgtccctgt ttcatgatcg acaatcccaa
     7681 ccatcataaa caaactacct ttaaatgtcg cgtgattaaa tagatggaac acagctgcga
     7741 caatcgccat cacataaata tcatcactaa gcgtgtcaaa gtgaagggag gcagcaccga
     7801 caccaagaag cgccataatg agaccaagct gacttatcgt cgaataagcc aaaattgctt
     7861 ttaaatcatt tttcttcgtg gcattaagtg aaccccagaa aagggtcgta atcccaacga
     7921 gtgataccgt ccaaaaccat acacccgaac ttgcaaatag tggcgtgaac cgagcgacaa
     7981 tataaatccc agcttttacc atcgtagcag agtggaggta ggcactgacc ggagtaggag
     8041 cttccatcgc atctggcaac caaatatgga atggaacttg cgcagatttc gtaaatgccc
     8101 caagcaagat aagaatcatc gcaggaatga ataaactatt attactaatt acatccgcgt
     8161 tactaataat ctcccgaatg gaaaaagaat cgctcataat atgaagcaaa ataaatccgc
     8221 caagcatcat cagtccgccg aagactgtaa tcatcatcga tttacgagcc ccgtaccgtg
     8281 aacgctcacg atgataccaa tacccaatca ataagaacga actaatggaa gtaagctccc
     8341 agaaaagata caacacaatc aagttatcac tcaagacaac cccgagcatt gccgtcataa
     8401 aaataaataa aaatgtatag aaattgctaa gtcgttcttt ctttttccct aaataataaa
     8461 tagagtaaaa ggtaacgagt gaaccaatcc ccgtaataag tagcgcaaac agcaaactaa
     8521 gcccatctac tactaccgta aaattaatcc caagtcgcgg aatccaaggc attgaaacaa
     8581 tcgttgcccc gtccatcgtt tttgggataa atgttaagaa gtaaataaac aaaatcactg
     8641 gaattggaag tactaaccag ccagtatgaa cttgtttggt ccaccggtaa aaaagtggaa
     8701 ttagcagtgc cacaataaat ggcagaacaa ttgctagatg aagaaatgac aaaatcggct
     8761 cctcctcgaa gaatttttat acggaaactc atcctggaaa tgtgaaaata aaaacaggaa
     8821 atcattattt tttaagcaag tacttacatt taatgaaaca tagttataac taaaatttta
     8881 gaaaaccgtg ctaactcatc aaatttcaac aactttacta ttcacgaagt acccaaataa
     8941 acgccgtact ttttatattt tttattataa catacttttt tatctgaaaa aaaggcagga
     9001 aacttaactt tataaatcaa tttaccgaaa tttaaaaaac aatttaatag gaagaacaaa
     9061 aaaacaaacc taagaaaaaa cttaggtttg tcaaattcaa tccacgttca catgccgttt
     9121 ccggtcggaa tgaagggcat aaagcaaaat gaaaaatgcc acgaggaaca taaaactcat
     9181 aaataagaac acactcggaa ttcctgtgaa accagcgagc gtcccaccga ggattggtcc
     9241 aataacattt cctaaaaagc gagcactttg attatagcca agcatttcgc cttgcataac
     9301 accaggcgcc gcaagccgaa tataagctgt cgtacatggc accataccac caatcgcaat
     9361 cccgaataaa aagcggaaga agataaacac ccaaagattc gtcgcgaatg cctgtggaat
     9421 aacaaaaaca gccgccataa tcaacaatat atttagtatt ttctcatacc catatttgtc
     9481 tccaagctgt ccccattttc gcgtcatcac caagttcccg aatcccgtcg cagaaaacgc
     9541 cagcccggac aagaaagcaa tattgtctga ttgcgtcata tctcctacat aaagcgcaag
     9601 caacggttga acactaaagt tcgcaatttg gataagtgct gtaataacca tcaccgtgaa
     9661 tagaactcgt agcgtaaaaa tttgttttaa aactgcacga cgagaataaa cgactttggc
     9721 agcttctttt tgttcttctg tacgaatttc cttgacacca aaagcgacaa ttaaagccgc
     9781 aaccatcatc gcaattccgg taattgtaaa ggtatcttta aagccaaata aatccgccat
     9841 cgcgccgcca atcaagggac caaacagcat cccagtcacg cctccgagtt gcaaagtacc
     9901 gagaattttt ccagcttcat tacgaggagt ttgccgtgca ataaaggcat tactaacgcc
     9961 aataaagcca gtcacaaccc ccatgaaaat tcgtaaaatc agtaagtaag tgacagaatg
    10021 cgcaaatccc atcagaaaaa tacaaatcga taaaccaact gaagtcagaa tcaaaatccc
    10081 tttataaccg tgcttatcac caatacgtcc ccaaatcggc gaaaagataa aggcaattaa
    10141 aaatgttacg ccaaaaatat aaccggccca cctttgcacg taagcattgc tataatcacc
    10201 aaatgtttca atgtaaagag ataaaaaagg cataatcatt gtcatactgg ctgacatcaa
    10261 caggtttgcc agcattaaga tgtacaaatt ccgtgttcga gttgtcataa aagaatcatc
    10321 tctattcgta ttattgttaa aactgtcctt ttcattatag aataaaagat agcgaatgaa
    10381 aaataaagtg aaggatgtgc atttttggtt aaaaaaattg tcatttgggt ttcagctgtt
    10441 atactagtac tgtatctgat tgctgtcgtt gttaatttgc ttattatttg gctacgttag
    10501 taaacaataa atttaaacaa aagaaggagt ttttacaata tgacttaccc acaattatca
    10561 aaagaagtgg cacctaacga aattgaagca gaaatgatta caaaccgagg aactatccgc
    10621 atcaaattgt tccctgaaat tgcaccaaaa acagtagaaa actttgttac acattccaaa
    10681 aacggctact atgatggcct tattttccac cgtgttattc ctgaattcat gatccaaggt
    10741 ggcgacccag acggccgtgg tactggtggc gaaagtattt ggggcgaatc ttttgaagat
    10801 gaattctcta cagaagcttt caatttacgc ggagctttat ccatggcaaa cgctggtcca
    10861 aacacaaacg gcagtcaatt cttcatcgtt caaaaaccag atatgcctgc tgacatgctt
    10921 ggtcaaatgg aacaagctgg cttcccagta gaaattatcg aagcttacaa acaaggcgga
    10981 acaccatggt tagacggccg ccacacagtt ttcggtcacg taatcgaagg catggacgta
    11041 gtagacgaaa tcgccaacct accaactggc atgcaagaca aaccagtgaa tgatgttgtg
    11101 attgagaaga ttaatattaa ataactatac ttagagcact ttcatagaaa gtgctctttt
    11161 cgagtgaact tttaatagta atttcagata ggagttgaga aatctgtgga aaaatcccac
    11221 ccaataaaaa tcaacaacca actaatttac ggcagagaca aaacatggct tgaaagctta
    11281 caccaaaaca ccaaccaact tataataacg gttgaaattg attttgaaga tgaaagcacg
    11341 ctccaaaaaa tggtttttaa cggacttatt ttctattcat ccaccgaact cgacacctac
    11401 gaaaaaagta aatggagttc tagttggtta caaagccaaa gcaatttcga aataatcgag
    11461 cagtcaaatt taataaacga gcgagtgaaa ataagaagtg actacaacat ccaagatttc
    11521 aagcattacc ggattagtac gtatgactac attattgatg taatagcaaa aaactatcaa
    11581 ttaaaggaag ctcataaata aaacaagttt ctcgtcagct aagatgagaa acttgtttta
    11641 ttttaaacga atacttctga aaagaattca ttatatagtg cgcgaaccgc agtattttcc
    11701 tgctcttcct tcacgccaaa cattatgctc acctcagaag aaccttgatt aatcatttca
    11761 atatttactt tcgcatcgga taaagctttt gaagcacgag acgtaatccc gacattatgg
    11821 cgcatggtct caccaacaac cataatcagc gaaatcccgt gttgcataat cacttgatct
    11881 gcgttcaatt cttctttcaa acgagacata attgtctgct cggtatcttc gccaaactga
    11941 ttttcgcgaa taataatcgt taaatcatca atcccagacg gcatatgttc atagttcaac
    12001 ccagcatctt ccagaatttg caacactttc cgtccgaagc cgatctctcg gttcatcaaa
    12061 tatttactaa tataaatgct acaaaagccg tcatcactag caattccaac gactggacca
    12121 ttgttatttt cgcgttcatg aacgacacgc gtaccacaag aatcaggatt gttcgtattt
    12181 ttaatatgca ccggaatacc tgcatggaaa gccggaatta aagcttcatc atgaaaaaca
    12241 gagaagccgg catatgaaag ttcacgcatt tcccggtaag ttagttcaag aactttcttc
    12301 ggatttttca cgatagcggg attgactgcg tagactgcat ccacatccgt aaagttctcg
    12361 tataactcgg cttgggcgcc gtttgccaca atcgctccag taatatcaga gccacttcta
    12421 gaaaacgtgc taatttcgcc gtctttcgta taaccgaaaa atcctgggaa aacaataatg
    12481 ccttctcttt ctcgaagtgc aaacaaacga tcataggatt ctggtaaaac ttgcgcacta
    12541 gcatgttcat ctgtcacaag taaaccggcg tcttttggat taatataatt ggcgtttaag
    12601 cctttaaatt taaagtaagc ggcgattaat tttgcgttat tatcttcgcc actagctttc
    12661 attcgatcta aaaatttatc aggatcgctt ttgtccgatg agatagttgc ttgtaaatct
    12721 gcgcgaattt gattgataat ttcgtcgctc atccctgtat ctagcgctat ccctgcatat
    12781 cttgcaatga cagattcaaa caattcactt gtatcttccc cgagaagtgc ctttgccgcg
    12841 caatcaataa gtaggtcagt cacttttgta tcttccttga aacgtttacc tggtgcagaa
    12901 acaacaacga ttttcctatc aggatcctcc gctacaagtt ggaaaacctt atttaattgg
    12961 atccccgatg ctaaagagct tccgccaaat ttaattactt tcatgcaaca cactcctgat
    13021 ctgaattttt tagcttccga aagcgttgtt tttggatgat gcgaaatttt ctgacctttc
    13081 ggataaagtt attgtctatt atcgctcttt ttccgtgaaa tcgcaatgtt ttttcgtgtt
    13141 tttaattatt ttctctcgac tccagtagtt tacttgttta aaaagctaaa ggtagttata
    13201 ataagagtgt acaaaaaaag cagccttaat ctgaaaggaa agattacgat gaaaaatatt
    13261 gttttagtat gtgcggcagg gatgtcaaca agccttttag taacaaaaat gcgtaaagca
    13321 gcagaagaac gcggagaaac ttgtgaaatt gaagcgtact ccattgctga agtaagtaac
    13381 ttaattgacg atgcagatgt tgtactttta ggaccacaag tgcgttacca gaaaaaaaca
    13441 gttgatgaac tagctgctgg gaaaattcca gtagatgtaa tcgacatggc agcttacggt
    13501 acgatgaacg gtgaaaaagt actaggtcaa gcattagact taatcaacgg tttccaaaaa
    13561 taaacaataa aaaaacctgt gtggcactta agccacgcag gttttttagc tttcttgggt
    13621 aagtattccg tcttccatac gatacacatg gttgactaaa tctagcatac gctcatcatg
    13681 tgttaccatg attgctgttc ggcttgtttg cacaacttca ttccgtataa gctcgacaac
    13741 ttcacgactt ctttcagtat caagactcgc agttggttcg tcggctaaaa taacggaagg
    13801 ttggttgata agagcacgag caatagcgac acgttgcttt tgaccgccag ataaatcttt
    13861 tggatagaaa tttgcgcgat cactaatgcc aagttggctt agaagtgaag ctgtatcttt
    13921 ttcaagctcc gccgcacttt tcccagccat ttttccaata aagctgattt gatcttttac
    13981 gtgtaaataa ggaactaagt gagctgcttg gaaaataaag ccaatttctt ctaaacgaag
    14041 agcagtttgt tctttggaag ataaattccc gactgatttt ccgttaatag aaatcgttcc
    14101 gccagtcggt gttaatagcg ctccggcaag agaaagcagt gtacttttac cagaaccact
    14161 cggaccaaca atcgcgatta gttcaccttt tttagcttca aagtttgttt ccttcagtgc
    14221 atgaataatt gaaggaccgg acgggtagtc tttatacact ttatcaaaag atagtagagt
    14281 ttccattatt catcacctcc tcgaatggca tctaacgcat ctactttagc aattcgtcta
    14341 agtgatagaa gggcgccgaa tagagcaact aagaagaaca aaccactata aagcgcaatc
    14401 gtcatcggac ttaatctaaa tggcatcgct gctggcatga tacttggtaa aatcagcgtt
    14461 acaccgacac taattaaaat actaataatc gaaataatca ccacttgagt aataatgctc
    14521 ttaactaagt aacttgtttt cgttccaagt gctttcaaaa taccaaattg cgttgttttt
    14581 tgaagcgtca taacatagaa gaatgcggtt aaaataaatc cgccaataat gattaagaag
    14641 aaaatcatca tattaagcgt catttgttcc gcggaataac ctggaatttg atttaagaaa
    14701 cctttatgat caatcgttgt taaatcttta tccgaaaggg ttacgccttt atcaggattt
    14761 tctgttttaa tcgcaatagt acttgtttgc gggatttttt ggtgatataa aacaggattg
    14821 atttcttgcc aagtcgcgat attaatataa acaacgggag catggctata tttttgattt
    14881 tccgtaaagc cgacaaccgt taattctcta ttcaaaatat catccatcaa aacatcgcca
    14941 attttgattc cgtctgattt caaggaagaa tcaacgacga tttcgtcagg ttttgtcact
    15001 tgtatgttag ctccatcaga aatttttgga gcgagaaagc tatctggttg aataccgaaa
    15061 agtgcgacgc taaacttttt atcgtcactt tcccgtttta acgtttgcat agattgaccg
    15121 agaaccgcag catcttttac attcgcatct tttttcacat cagcgagttt ggattctggg
    15181 aactgagatc gagataattt gtcttgggcg tctttgctga gaacataata tggaaccccg
    15241 ttatctgcta cagatgaagc attatcgtaa gccagcccgt ttgccaaccc tgataaaata
    15301 agtgatagta acataattaa gaccatgatg cctgttacta aaatatagcg caacttagaa
    15361 taaactaatt cacgaagccc taaaaacatc gattatacca actcctttaa atttatgtaa
    15421 acggaaaatg aacactattt cactttccaa agaatagtat accaaagcta tattcaattt
    15481 cctaaagaaa gaaactaagt gtttgctact tagtttctca aaataagcta tttttttaag
    15541 ccttgaatca gaagtttcac agctttttct aaagtttctt ttggacaggc gatgttaaaa
    15601 cggacaaagc ctttcccgga atgtccaaat ccagaaccca tttgaacacc aacaccagct
    15661 tcgattaaat cagcataaat cgttttttcg tcttttggaa gagcgcgaca atcaagccac
    15721 atcaagtagg ttgcttctaa gtcggtcaca ccaacttcgg gtacttcttt ttcgagtgct
    15781 gctttgacat attcatagtt gctataaata tattctttca actcttttag ccaaggcacg
    15841 ccgtggcgat acgctgcttc tgtaccaaca atcccaaaga cattgagccc attagttgtg
    15901 gcgtactttt gctccgcagc gaatttggcc tgataatctt tattcgtaat aatatagtag
    15961 gaagctttaa tcgccgccaa gttaaatgtt ttcgtagccg ccattaaagt aataatttga
    16021 tcttgataaa acggtgctgc gaccatcatt ggcacatgtt tatgattttt catcactaag
    16081 tcagcatgaa tttcatccga aacaatcgga atttggtatt tctcacatag tttcgctaat
    16141 tccacaagtt cttccttggt aaaacaacga ccaccaggat tttgcggatt acatagaagg
    16201 aataatttta ccttttcttc tttcatccgt ttttccaaat cattaaaatc cattcgatat
    16261 tgacggttct catatataag tggcgacata accacttttc tctcagtggc tttcgttaca
    16321 ttgaaaaatg gtgggtaaat cggcgaaacc attagaactg catcgccttc atttgtgaga
    16381 gagcgaatcg ctaacgaaat tgtcggaaca accgctccat taaaaaataa cgcgctcgga
    16441 tcgatttcaa actgatgctg ctctttgttc caatcgataa tagcttcgac aagtgccgct
    16501 gacttggtcg aataaccaaa aatcccatga tcgatttgac gctgaaatgc atcaagtaca
    16561 ggctgcggcg cacggaaatc catatccgct acccacatcg gaataatatt ttttctgcca
    16621 aataattctt ctgccccatc ccacttctct gaattagttc caatacgcgg aatgacttca
    16681 tcaaattgac tcaaatatgt cacgctcctt ctctttcatt cgcctcaatt atagcataaa
    16741 ttccacccta aaagctcacc ggagaaggat ttagaataat tgttaaagtt tcgcctaagt
    16801 gttataattt ataaaatatt gtaaggttga aagtaggtgg aatgaggatg agtacattca
    16861 aagtaggaga tgtagtttct gggaaagtcg caggaattca aagctacgga gcatttgtag
    16921 cgctagataa ttcgacacaa ggcttagttc atatttcaga aattacgcat ggttttgtca
    16981 aagatatcca tgatttttta gaagttggcc aagaagtcaa agtcaaaatt ctggatattg
    17041 acgaagaaaa aaataaaatc agtctttcta ttagagcgac agaggaagca ccaaaagaac
    17101 aaccaactaa aaagaaacaa gtttcatcta gcgaaaacga cgaaggtttt aacactttac
    17161 gcgataaact agaagaatgg attaaaaaag cagacaaata aaagtcccaa tcagcttggt
    17221 aatataccca ttttgggata aattgctaag ctggtaaatt taattgacta aaattttaga
    17281 aaaagggaat agttagtagt aattttctat ttattcaata ttataaaata gtcaaaaggg
    17341 ggatttacgt gaaaagatct attcatgtgc aggcatttgt atataacgaa aagaaagacg
    17401 agatactagt ggtgagagat cgcaatttga catgggcatt tccaggggga catgtggaaa
    17461 caaaccaaac aatggaagaa gcacttgcaa gcaaagtgaa agagcagaca aatatcgata
    17521 tagaaataga gtctatccta cactgcaaag agcgccgtgc tacatgggag catgtttgta
    17581 cattcgtttt tcgagcaaaa cctgttggta atgcacttct tgcttccaat gatgacaatg
    17641 tgtttcgagt gaagtggata cctatcccgc tcgcagatga tttattagct gtagaccaat
    17701 tatcattaaa tgaactagta agaagcgaag gcgtcttgta tgaaaactat acctaaattt
    17761 caaaaaggct caaatttcac aaggtcaagc cttgctaaaa agcactgatt gatataaagt
    17821 taataaagaa acttttttaa aatttggagg gaaaacaatg acacatatta aatttgatta
    17881 ttccaaagcg ctccgttttt ttgaagaacg cgaacttgat tatcttgaac cagcagtaaa
    17941 agcagctcat gattcattac ataatggtac aggtgctggt aatgatgcac ttggttggat
    18001 taacttacca acagattacg acaaagaaga atttgctcgt atcaaaaaag caacagaaaa
    18061 aatccacagc gactccgacg tattaatcgt tatcggtatc ggtggttctt atcttggggc
    18121 acgtgctgca atcgaaactt taaatcattc cttctataat gtacttgaaa aaggtgctcg
    18181 taaaacacct caagtattct ttgcaggaaa tagcattagt tcctcttact tacatgactt
    18241 aattgaagta gttggcgacc gtgacttctc tgttaacgtt atttctaaat ccggaacaac
    18301 aacagagcca gcaatcgctt tccgtgtttt caaagaactt ttaatcaaaa aatatggcga
    18361 agaaggcgcg aaaaaacgca tttacgctac aactgataaa gcaaaaggcg ctctaaaaac
    18421 attagctgac aatgaaggct acgaaacatt tgttgttcca gatgacgttg gcggacgttt
    18481 ctctgtttta actgcagtag gtttacttcc aatcgcagtt agtggcgttg atatcgatgc
    18541 tcttatgaac ggagcagcag cagcaagcaa agatttcgac aaacctgaac taaaaaataa
    18601 cattgcatac caatacgcag cagctcgtaa tgttctttat cgtaaaggca aagtaacaga
    18661 acttctaatc agctatgagc caggcttgca atactttaac gagtggtgga aacaattatt
    18721 cggcgaaagt gaaggtaaag acaaaaaagg tatttaccca tccagcgcga acttctccac
    18781 tgacttgcac tctatcggcc aatatatcca agacggacgt cgcaaccttt ttgaaacagt
    18841 tatcaaagtg gataaaccac gccacaactt aactatcaat aaagaagacg tagatttaga
    18901 tggcttaaat tatcttgcag gcgaaacagt tgatttcgtt aatacaaaag cattcgaagg
    18961 aactcttcta gcacatacag acggcgaagt tccaaacttt gttgtagaag ttccagaact
    19021 agatgcatac actttcggtt acctagtata cttctttgaa aaagcagtag ctatcagcgg
    19081 ttacctaaat ggcgtaaatc catttgacca accaggcgta gaagcataca aagccaacat
    19141 gttcgcatta cttggcaaac caggcttcga agacaaaaaa gcagaattag aaaaacgctt
    19201 aaacgattaa ttttcacttc caaaccttgg ggccaattgc tccaaggttt tttgtttgtt
    19261 tgcgattttc ttccattgga gttaccatat agttaaacaa aaggagggga agaagtgcta
    19321 tctatcgaac gaaaacgcgc catcgtccaa tatgtcaaaa gccgaaaaat agcaactgtt
    19381 agcgaattag ctaaacattt tgaagtccac gaagcaacca ttcgccgcga tttaacctct
    19441 ttagaaaaag acaaaaagct aaaaagaacc cacggcggag ttatgataga agaaaaagta
    19501 gtttccgaac caaattggaa aaaacgaagc gaagtgcgct atgaagaaaa acaacgcatc
    19561 gccacgttag cagcgacaat ggtcaaagac ggcgatacaa tcattcttga cgccggaaca
    19621 acaaccggac acatcgcaac cgcattaaaa gaccgatcca aactaaccgt cataacaaac
    19681 gatatcaacg tagcttccat tatgcgcttt tccccgtcta aagtaattgt gacaggtggc
    19741 gtcatctacc cagaaacttt catccttaac ggtatgatta cgagcggaac cttgcagagc
    19801 attcacgtac ataaagcatt tgtaaccaca ccggcactcg atatcgacaa aggcttaatg
    19861 cactacgacg aatacctaat cccagctaag caacaaatgc tccactcagc cgatgaagtc
    19921 atcttagtaa cagaccacac caagtttggc cgcatttcac tttacaaata cgcagcccta
    19981 gacgaaatct cttctattat cactggaaaa gaaatagacc cagtattaaa agaacaattt
    20041 gaagaaaaag gaatgcaaat ttatacaaca taatgtttta aaaactccat ttaatcacca
    20101 atttatgcac caaattcatc ttttttcatc tttatttaaa aaactttgta aaaagtattg
    20161 acgaaaggca aaaatcttgg tatatttata aacgttgctg atgcggacaa aacgctttcg
    20221 caacaaaaga aa
//
LOCUS       DASDYK010000042        19427 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.042, whole genome shotgun sequence.
ACCESSION   DASDYK010000042 DASDYK010000000
VERSION     DASDYK010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 19427)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19427)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19427
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.042"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..677)
                     /locus_tag="U0308_001505"
     CDS             complement(<1..677)
                     /locus_tag="U0308_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003723041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEM2316472.1"
                     /translation="MKRATVWPNLLLIVLGCIWIFPIIWIVLTAFRAESGQFVSYIFP
                     KEYTLDHFAYLFENHENFPFMLWVKNTMIVAVCSCLLSTFITVSMAYVLSRLRFRFKK
                     TMLKTALVLNMFPAFMSMIAVYYILKAFGLTQSLTALVLIYSSTAALTFYIAKGFFDT
                     IPKSLDESAMMDGATKLSIFTKITLPMSKPIIVYTALMAFMLPWMDFIFAKVIMGDNV
                     PKYTVSIG"
     gene            complement(679..2016)
                     /locus_tag="U0308_001506"
     CDS             complement(679..2016)
                     /locus_tag="U0308_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2316473.1"
                     /translation="MMVKKNYFNIFKNGSVSTRLSYVIMGAGNLAHKQIAKGLLFLFS
                     ELAFLFFLVFYGITLIQGMATLGTVNQSWNFDKSLGIMVRTPGDNSMLMLIYGIMTVV
                     ICVLFLFLYLANIRSACQVEGFQRENKKIPTFKEDLKSLLDNKFHVTLLTIPMIGVVV
                     FTIMPLVYMISLAFTNYDHEHLPPRNLFGWVGFVNFKNVLNGDISSTFFPVLGWTLIW
                     ALLATATCFFFGVLLALLINHKGVKFKKFWRTIFVITMAVPPFVSLLVMQNLLHAAGP
                     LNTMLLNWGIIAEPIPFLTDALLAKVSVIFVNMWIGIPVTMLIATGILMNLPKDQLEA
                     ARMDGGNSFHLFRYITFPQILTVMLPSLIQQFIGNINNFNVIYLLTGGGPSNSNFYGA
                     GDTDLLVTWLYKLTVEAADYNLASVIGIVTFILSAAFSLFAYTRTNSYKEGSN"
     gene            complement(2034..3260)
                     /locus_tag="U0308_001507"
     CDS             complement(2034..3260)
                     /locus_tag="U0308_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEM2316474.1"
                     /translation="MKKLLLSISIIVGLSLLASCGVEKEYKPDIKVNEKNVSLKVWVD
                     LNQGDFYRKVVDDFKKEHPDKNYDITVIESESGRAQEYVQKDPEAAADVFITPNDRLG
                     QLVESGAVYQLTKYTDDIKKNNTPTSIQAATYQDKMYGFPVTAEAMFMYYDKRVFSED
                     DIKTFSGITSKGKLGINLAEAGADYRETPWFIANGTYLYGENGEDPYGTTFNTPEGVQ
                     VLNWIGELKNNPNVVAVNADEISALRSGKINAVFSGVWNKDAIREVLGENMGVAVYPK
                     ADFGSGQVDMMAFQGSGIYCVNAFTKSPLDAMELADYITNADVQEKAFKELGKIPSNL
                     EARTSSTVEKDDVAKAVIDMTSGKHSVLMPKIPEMNVFWQHMNPLLVDTYKGKIKKED
                     YPEALDKLVKDITPAK"
     gene            complement(3398..4393)
                     /locus_tag="U0308_001508"
     CDS             complement(3398..4393)
                     /locus_tag="U0308_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2316475.1"
                     /translation="MNKVTKIGDVAEKTGYSITTISRAINGNPNVSDKTKKKIFAAMK
                     ELNYYPNNIAQQFRGQGTKMIGVVISFITNPFFAYLVDAIERYLSHRGYQVVMLQTLE
                     NPAKELQFIEMLQKKQLDGLIMANLENDTEEIKSLVESGKIVLCNRYLGNENLTIINI
                     DETKAAYQATNYLIKCGYKRLAYCTGGIKNKNDYRFKGFMQAVTENGLSFDESLYFEK
                     LLTIKDGEELLVNILEEKSTLPDAIFSNGDTVAAGILYAAKKYGIAVPEELGIIGFDN
                     QPIAEVLNPALTTIEQPIKELGEYSAQVLLANLQGTSVPVAPDLETKLIIRETTK"
     gene            complement(4538..5716)
                     /locus_tag="U0308_001509"
     CDS             complement(4538..5716)
                     /locus_tag="U0308_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-splicing ligase RtcB"
                     /protein_id="HEM2316476.1"
                     /translation="MLTLKGKYNEAKVFTDNVDDNTIGQIITLCNQPFAKGSKIRIMP
                     DTHGGKGCVIGTTMTIQDKIVPNLVGVDIGCGLYVVKLKPGKLKMDFDKLDKVIRERV
                     PSGSKTHDKPVDEFDLEGIVAPIHRGWVARSIGTLGGGNHFIEVNQGSDGIYLVIHSG
                     SRVLGKEIAEYHQEVAYKRLDILRKELKLDATAAKKRGNLEMANNLNGEREQVKLDYD
                     LSYVTGSDLNNYLNDMEIAQKFAARNRYVMAETILKAMKWDKIVVSAFDCVHNYIDID
                     NHMLRKGATSAQLGEQIIVPLNMRDGSILATGKGNADWNYSAPHGAGRMLSRSKAKAQ
                     ISLESYQAAMKDVWTTSVSKKTIDEAPKAYKSAKQLLVDVEDTMEIQEIIKPLYNFKA
                     "
     gene            complement(6064..6669)
                     /locus_tag="U0308_001510"
     CDS             complement(6064..6669)
                     /locus_tag="U0308_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2316477.1"
                     /translation="MTNNHYYTNDETIKHNRKTWQVMLKGFNMSFTSDNGVFSKNTVD
                     FGSRLLIESFELETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKEN
                     AEINKITNTHIYESSVYDSVTANDYQAIISNPPIRAGKRIVHAILEGAYDHLQETGEL
                     WIVIQKKQGGPSAEKKMEEVFGNVETVAKDKGYFIFKSVKN"
     gene            complement(6812..7174)
                     /gene="rplL"
                     /locus_tag="U0308_001511"
     CDS             complement(6812..7174)
                     /gene="rplL"
                     /locus_tag="U0308_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEM2316478.1"
                     /translation="MALNIEEIIASVKEASVLELNDLVKAIEEEFGVTAAAPVAVAAA
                     GGAAAEQTEFTVELASAGDSKIKVIKVVREITGLGLKEAKELVDNAPKALKEGVAKEE
                     AEEIKAKLEEVGANVEVK"
     gene            complement(7253..7753)
                     /locus_tag="U0308_001512"
     CDS             complement(7253..7753)
                     /locus_tag="U0308_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEM2316479.1"
                     /translation="MSKVLEAKQSAVEEIKTKLSASASTVIVDYRGLNVGEITELRKQ
                     LRDAGIEFKVYKNSLTRRAVEANGYEGLEGALTGPNAIAFSNEDVVAPAKILNDFAKD
                     HEALEIKAGVIEGKVASLEEIKALATLPSREGLLSMLCNVLQAPVRGLAIATKAVADQ
                     KEGQEA"
     misc_feature    complement(7809..7952)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00557"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L10 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00557"
     gene            complement(8001..8690)
                     /gene="rplA"
                     /locus_tag="U0308_001513"
     CDS             complement(8001..8690)
                     /gene="rplA"
                     /locus_tag="U0308_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEM2316480.1"
                     /translation="MAKKGKKYQDALKQIDANKVYTAEEAVELAKKIDFAKFDATVEV
                     AFRLGVDPKKADQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGESEFVE
                     KINQGWFEFDVIVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVTKAVNEIKAGK
                     VEYRVDKAGNVHAAIGKVSFDAAKLVENFRTVNDVLQKAKPAAAKGTYVKNLSVTTTF
                     GPGIKVDPASL"
     gene            complement(8730..9155)
                     /gene="rplK"
                     /locus_tag="U0308_001514"
     CDS             complement(8730..9155)
                     /gene="rplK"
                     /locus_tag="U0308_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEM2316481.1"
                     /translation="MAKKVIKEVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNA
                     RTADQAGLIIPVVITVFEDRSFTFITKTPPAAVLLKKAAKVEKGSGEPNKTKVASVTR
                     AQVQEIAETKMPDLNAANVESAMLMVEGTARSMGITIQD"
     gene            complement(9282..9752)
                     /locus_tag="U0308_001515"
     CDS             complement(9282..9752)
                     /locus_tag="U0308_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 63 family protein"
                     /protein_id="HEM2316482.1"
                     /translation="MDKAKQIYLEFKREADFLELDFPLFLGDGPGFGELCMDYSEQDG
                     YMLYGYERGKRNSEFKTTDFDEFKYEVFLHICWYMGMEFELRHRKEDMRHDDNILEAD
                     TRKIAFEKTLQLLKKVNPAWIDKAAQGYTAYLNLWRENKNVYFDKEAMEFKVNS"
     gene            complement(9807..10340)
                     /gene="nusG"
                     /locus_tag="U0308_001516"
     CDS             complement(9807..10340)
                     /gene="nusG"
                     /locus_tag="U0308_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEM2316483.1"
                     /translation="MEKNWYVVHTYSGYENKVKANLEKRVESMGMSDKIFRVIVPEEE
                     ETEVKNGKTKTIKRKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTPLL
                     PEEADRILKSMGMVEKRAEADFEIGETVMVKEGPFADFSGKVDEMDNDKGKAKVMVNM
                     FGRETPVEVDFNQIEKL"
     gene            complement(10470..10649)
                     /gene="secE"
                     /locus_tag="U0308_001517"
     CDS             complement(10470..10649)
                     /gene="secE"
                     /locus_tag="U0308_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEM2316484.1"
                     /translation="MSAIARFFRNVSSEMHKVTWPTRKELLTYTVTVVITVVLFALFF
                     MLIDFGIEQIIKLIV"
     gene            complement(10669..10818)
                     /gene="rpmG"
                     /locus_tag="U0308_001518"
     CDS             complement(10669..10818)
                     /gene="rpmG"
                     /locus_tag="U0308_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEM2316485.1"
                     /translation="MKKKTSLACSECGSRNYTVNVSGTQKETRLEVKKFCRHCNKHIL
                     HRETK"
     gene            complement(10922..11527)
                     /locus_tag="U0308_001519"
     CDS             complement(10922..11527)
                     /locus_tag="U0308_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sporulation sigma factor SigH"
                     /protein_id="HEM2316486.1"
                     /translation="MDNSVNQEELAMLELARSGDTEALEYFFSKYQSVIYWKSTQYFL
                     QGAERDDLIQEAMIGLFKAIRDYDKTKEASFRSFAEMCINRQLLSAVKRASRQKNIPL
                     NNSVSLDTPIAEDDMDWTLLDVISEKAAETPEDFLIKNEDLTHVARQLEQVTSEFEKE
                     VLKQYLEGKSYQEMALFFNKKEKAIDNALQRVKKKMMKQLE"
     gene            complement(11608..12120)
                     /locus_tag="U0308_001520"
     CDS             complement(11608..12120)
                     /locus_tag="U0308_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEM2316487.1"
                     /translation="MEQILLVDGYNVIGAWPELSFLKDRDLEAARDKLVEWMAEYQSY
                     TGYRVVVVFDAQFVRGVKRKSKKYQVEVVFTHEDETADEYIEQKAIEWKNVRTQIMVA
                     TSDYTEQWAIFGQGALRISSRELLFEIQEMSKQIGQKIKRIQEEMPKSNLNLDSDVIS
                     QLEKWRRGEE"
     gene            complement(12123..12878)
                     /gene="rlmB"
                     /locus_tag="U0308_001521"
     CDS             complement(12123..12878)
                     /gene="rlmB"
                     /locus_tag="U0308_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEM2316488.1"
                     /translation="MEQENEQEWIGGRNPVLEVLRSDRDIHKIYVQEGSQKGVLKQVL
                     TLAKERKIQVQFVPKQKIEKVVGGAHQGVAAQVAAYQYAELDDLFAAAEAKDEMPFFI
                     ILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTN
                     MVRTMEELQKRGLWIFGTDAKGSSDYRTMDVDMPLAIVIGSEGFGMSRLVREKCDFLV
                     HLPMRGKVTSLNASVAASLLLYEVYRKRFPLEK"
     gene            complement(12878..13288)
                     /locus_tag="U0308_001522"
     CDS             complement(12878..13288)
                     /locus_tag="U0308_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mini-ribonuclease 3"
                     /protein_id="HEM2316489.1"
                     /translation="MAEVKEYKQLNGLALAYMGDAVYEKFIREYLLAAGKTKPNQLHK
                     TATKFVSAKGQAVALKAMIAEGFLTEEEDRIAKRGRNAKSYTVPKNTDPGTYSMSTSF
                     EAVLGYLYLAGELDRLQEWMEKALEIVEKGVETN"
     gene            complement(13292..14707)
                     /locus_tag="U0308_001523"
     CDS             complement(13292..14707)
                     /locus_tag="U0308_001523"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEM2316490.1"
                     /translation="MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARP
                     IIVFDTVRRYFTYRGYDVKFVSNFTDVDDKLIRAANELKLTVPEVADRFIGAYFDDVD
                     QLNVAKATVNPRVTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQEL
                     SELQHGARVEYNERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLG
                     DTIDIHAGGQDLVFPHHEDEIAQSEAATGKTFANYWMHNAFLNIDGEKMSKSLGNFIT
                     LHDVLKDNDPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDD
                     GEYVEEAHEDEWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSI
                     NVLREFLSMMRLFAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRD
                     ILKEKNIILEDTAQGTRFRRG"
     gene            complement(14714..15328)
                     /gene="cysE"
                     /locus_tag="U0308_001524"
     CDS             complement(14714..15328)
                     /gene="cysE"
                     /locus_tag="U0308_001524"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEM2316491.1"
                     /translation="MPTRLKEDIATIIKNDPATKSFFDAFLTNPGLHALWWHRVANFF
                     YRHKMVLFGKVLSQNARFWTNIEIHPGATIGRRLFIDHGAGIVIGETAEIGDDVTIFH
                     GVTLGGTGKDCGKRHPTVGDGALVSAGAKVLGPVEIGAGARIGAGAVVLKDVPPGATV
                     VGIPAKVVRLNGRTVGHAVPKMDELTLRIAELENIVEKLLKEKE"
     gene            complement(15728..17203)
                     /locus_tag="U0308_001525"
     CDS             complement(15728..17203)
                     /locus_tag="U0308_001525"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEM2316492.1"
                     /translation="MSETKRVRVRYAPSPTGFLHIGNARTALFNYLFARHNDGDFIIR
                     IEDTDAKRNIADGEESQMTNLKWLGMDWDEGVDVPGKYGPYRQSERQSIYEPLIQQLL
                     DEGLAYKCYCTEEELDAEREKQKANGEMPRYSGKCRHLTKEQQAEKEAQGFKPSIRFK
                     VPANETITFNDMVKDDVSFESNGIGDFVIAKKDGIPTYNFAVAVDDHLMEISHVLRGD
                     DHISNTPKQILIYNAFGWEPPIFGHMTLIVNESRRKLSKRDGSIIQFIEQYRDLGYLP
                     EALFNFIAMLGWSPEGEEEIFSKEEFIKMFDPKRLSKSPALFDNVKLTWVNNQYVKKL
                     PLNDVVELSLPHLQKAGVVSAELDQAELDWVHKLVSLYHEQMSYGAEIVPLSEMFFAD
                     AESITFDEEETAVLAEETVPTVISAFKKELEALEVLEAAEVKAAIKRVQKETGVKGKG
                     LFMPIRIVTTGEMHGPELPLAIEVLGREKVLNRLDTWLKNN"
     gene            complement(17222..17695)
                     /locus_tag="U0308_001526"
     CDS             complement(17222..17695)
                     /locus_tag="U0308_001526"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEM2316493.1"
                     /translation="MIRIGQGYDVHKLAYDRELIVGGIKIPYEKGLLGHSDADVLLHA
                     ITDAIIGAIGAGDIGHFFPDTDMAFKDADSAELLAEIWQKVEADGFRLGNLDATIIAE
                     KPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK"
     gene            complement(17688..18386)
                     /gene="ispD"
                     /locus_tag="U0308_001527"
     CDS             complement(17688..18386)
                     /gene="ispD"
                     /locus_tag="U0308_001527"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEM2316494.1"
                     /translation="MNYELVFLAAGQGKRMNAQKNKMWLELVGEPIFIHALRPFLADN
                     RCSKVIVVSQEEERKHVKELMSQLNVAESRIEIVKGGSERQYSVAAGLERCGTERVVL
                     VHDGARPFITLDIIDRLLIGVEQSKAAICAVKVKDTVKRVVKGVVQETVDRENLWQVQ
                     TPQAFELPILRKAHQLARKEQFLGTDEASLVERLPCPVAIVQGSYYNIKLTTPEDMPL
                     AKAILGELGGIAND"
     gene            complement(18406..19401)
                     /locus_tag="U0308_001528"
     CDS             complement(18406..19401)
                     /locus_tag="U0308_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN/TRAM domain-containing protein"
                     /protein_id="HEM2316495.1"
                     /translation="MKLGIGHILLINNPYTDALIGALIFYLITFWAVKYVEAALNWLE
                     EKLAKIAIATLVYGGLGLFVGLVIAFFASNALSQTNIPLLNSVVPVILTLVLGYLGFR
                     IGISRRNEFGNFVNNRNAKKRTPEEEKTEEKSKKTYKILDTSVIIDGRIADILTTGFL
                     DGTVVIPLFVLAELQHIADSSDTLKRTRGRRGLDILNRIQKEEAIQVEMYEGDFEDTP
                     EVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQNVPVLNINDLANAVKPVVLPGEKMTVL
                     MVKDGKEHNQGVAYLDDGTMIVVEDGRKFINETIQVEVTSVLQTSAGRMIFAKPS"
BASE COUNT         5623 a         4454 c         2998 g         6352 t
ORIGIN      
        1 cctatcgaca ctgtatattt aggcacattg tctcccataa tcactttagc aaaaataaaa
       61 tccatccaag gcaacataaa tgccattaaa gctgtgtata caataatagg cttagacatt
      121 ggtaaagtta tttttgtaaa gatacttaat ttcgtcgccc cgtccatcat tgccgattcg
      181 tccaaagatt ttggtattgt atcaaaaaat ccttttgcaa tataaaaagt taatgcagct
      241 gtagatgaat aaattaacac aagcgccgtt agagattgcg ttaatccaaa tgctttcaaa
      301 atatagtaaa ctgctatcat gctcataaaa gcaggaaaca tatttaaaac tagcgctgtt
      361 tttaacatcg tctttttaaa tctaaagcga agtctagata acacataagc catcgaaacg
      421 gttataaaag tgctcaataa acaggaacac accgcaacaa tcattgtatt tttaacccat
      481 aacataaaag gaaaattttc atgattttca aataggtacg caaaatgatc tagcgtatat
      541 tctttcggaa agatatacga aacaaattgt ccactttccg ctctaaaagc tgtcaaaaca
      601 atccagataa tcgggaatat ccagatacac ccgagcacta tcaacaatag attaggccat
      661 actgtagctc ttttcatttc agttgctccc ttctttataa gaatttgtac gtgtgtaggc
      721 aaataacgag aatgccgcgc taagaatgaa tgttacaatc ccaataaccg aagctaaatt
      781 ataatccgca gcttctactg ttaatttata aagccatgtc acgagcaaat ccgtatcccc
      841 agcaccatag aagttactat tcgaaggtcc tccaccagtc aagagataga tcacattaaa
      901 gttatttata tttccaataa attgttgaat cagacttggc aacatcaccg ttaagatttg
      961 agggaaagtt atgtatctaa ataaatgaaa actgttacct ccatccattc gcgccgcttc
     1021 caattgatct ttcggtagat tcattaaaat ccccgtggcg attaacatag ttaccggaat
     1081 cccaatccac atattgacaa atatgacgga tacctttgct agcaaagcat ctgtcaaaaa
     1141 tggtatcggc tcagctataa ttccccaatt aagtaacatc gtattaagcg gtcctgctgc
     1201 atgcaacaag ttctgcatta cgagaagtga cacaaacgga ggtaccgcca tagttataac
     1261 aaagatagtg cgccaaaact ttttgaattt aacaccctta tgattaataa gaagtgcaag
     1321 caatacgcca aaaaagaaac aagtagcagt agctaaaagc gcccaaataa gtgtccatcc
     1381 aagcaccgga aagaacgtac tggaaatatc accatttagc acatttttaa agttaacaaa
     1441 tcctacccat ccaaataaat tccttggcgg taaatgttca tgatcataat tggtaaaagc
     1501 caaagaaatc atataaacaa gtggcattat cgtaaacacc acaaccccaa tcatcgggat
     1561 cgtcagtaaa gttacatgaa atttattgtc tagcaaactc tttaagtctt ccttaaatgt
     1621 tgggattttt ttattttccc gctggaagcc ctccacctgg caagcgcttc taatattagc
     1681 aaggtacaag aagagaaata gtacacaaat aacaactgtc ataatcccat atattagcat
     1741 cagcatggaa ttatcgcccg gtgttcgaac cataatacct aaactcttat caaaattcca
     1801 cgattggtta actgtcccta atgtcgccat accttgaatt aaggtaatgc cataaaacac
     1861 aaggaaaaac aagaaagcaa gttcactaaa aagaaataga agtcccttcg caatttgctt
     1921 atgggccaaa ttaccagccc ccataattac ataagataat ctcgtagaaa cagaaccatt
     1981 cttaaaaata ttaaaataat tcttcttaac catcatatac ttaacctact ttcctatttc
     2041 gctggtgtaa tatctttgac taatttatcg agcgcctctg gataatcttc tttcttaatc
     2101 ttgcctttat aagtatctac taatagcggg ttcatatgtt gccaaaaaac gttcatttca
     2161 ggtattttcg gcattaaaac ggagtgcttt ccggatgtca tatcaataac tgctttcgcc
     2221 acatcgtcct tttctactgt agaactagtt cgtgcctcta aattgctcgg aattttccct
     2281 aactctttaa aagctttttc ctgcacatcc gcattagtaa tataatcagc tagttccatc
     2341 gcatctaatg gcgatttagt aaatgcgttc acacagtata tcccgcttcc ttggaaagcc
     2401 atcatatcta cctgaccact tccaaaatcg gccttcggat atactgccac tcccatattt
     2461 tcacctaaaa cttctcgtat cgcatcttta ttccaaaccc cactaaaaac ggcatttatt
     2521 ttaccggatc taagcgcact aatctcatct gcatttacag cgacaacatt aggattattt
     2581 ttcagctcac caatccagtt caatacttgg acgccttctg gagtgttaaa ggttgtccca
     2641 taaggatctt cgccgttctc accataaaga tatgtaccat ttgcaataaa ccaaggtgtt
     2701 tcacgataat ccgcgccagc ttccgcaaga tttattccga gcttcccttt agacgttatt
     2761 ccagaaaaag ttttaatatc atcctctgaa aaaacgcgct tatcataata cataaacatc
     2821 gcttccgccg tcacagggaa accatacatt ttatcttgat atgtagcagc ttgaatggag
     2881 gttggtgtat tatttttctt aatatcatct gtatactttg tcaattggta aaccgcacca
     2941 gactctacca gttgtcctag acggtcattc ggagttataa atacatccgc cgcagcttct
     3001 ggatctttct gaacatattc ttgtgctcgc ccagattcag attcaataac cgtaatatca
     3061 taatttttat caggatgttc ttttttaaaa tcatctacca ctttcctata aaaatcaccc
     3121 tgatttaaat ccacccaaac ttttaaagaa acatttttct cgtttacttt tatatctggc
     3181 ttgtattcct tttctacacc acaactagcc aacaaactta aaccgacaat aatactgatg
     3241 gacaaaagta acttcttcat acttgaacat tctccttatc ttcacttaaa atgacaaccg
     3301 gttgtcattt tagcttaagc ggtttcatat atcgtaaaaa taatatcaat tatcttataa
     3361 aatgtcaacc gttttcataa aaataataag agagaattta cttggtagtc tctcttatta
     3421 ttagttttgt ttcaaggtct ggcgctaccg gcacactcgt tccttgtaaa ttagccaata
     3481 gaacttgcgc cgaatattca ccaagttctt taattggttg ttcaatagtt gtcaacgccg
     3541 gattcagaac ttccgctata ggttgattat caaaacctat gattcctagc tcctctggca
     3601 ctgctatccc gtattttttt gcagcatata atatcccagc agcaaccgta tcaccatttg
     3661 aaaaaattgc gtccggcaga gtagatttct cttctaaaat attaactaga agctcttcgc
     3721 catctttaat ggttaataac ttctcaaaat acaatgattc atcaaaagaa agtccatttt
     3781 ctgttacagc ttgcatgaat cctttaaaac ggtaatcatt tttattttta ataccaccag
     3841 tacagtaggc aaggcgttta taaccgcact ttattaaata attcgttgct tgataagccg
     3901 ctttcgtttc atcaatgtta ataatcgtca aattttcatt tcccagataa cgattacaaa
     3961 gaacaatttt gccactttca acgagtgatt taatttcttc tgtatcattt tctaagttag
     4021 ccataatcaa tccatctagc tgtttctttt gtaacatctc gataaattgt aattcttttg
     4081 caggattttc taaagtttgc aacatgacaa cctgataccc tctgtgagat agatagcgtt
     4141 caatcgcatc aacaaggtac gcaaaaaaag gattggttat aaaggaaatc acaacaccaa
     4201 tcatcttagt cccctgccct cgaaattgtt gagcaatatt attaggataa taattcagtt
     4261 ctttcatcgc agcaaaaatt ttcttttttg ttttatctga aacatttgga ttaccattaa
     4321 ttgctcgaga aatagtagtt atagaatagc ccgttttctc tgctacatct ccaattttcg
     4381 tcactttatt catatctatc tccctaaaat ttcaaattca tctattttaa tttattatat
     4441 cagattacag aaaaagtgag aacttatttc cttataacgc tactctaaca acaaaaagaa
     4501 gaagcagcaa atagtaatat atgctgcttc ttttccatca tgctttgaaa ttgtataacg
     4561 gtttaattat ttcttgaatc tccatcgtat cttctacatc aacaagcaat tgtttagctg
     4621 atttataggc ttttggagct tcatcaattg tttttttaga aacagaagta gtccaaacgt
     4681 ctttcattgc tgcctgatag ctttctaaac tgatttgcgc ttttgcttta gaacgactta
     4741 gcatccttcc cgccccgtgc ggcgccgagt aattccaatc tgcatttcct ttacccgttg
     4801 caagaatgct gccatcgcgc atattaagcg gaacgataat ttgctctcca agctgagcag
     4861 atgtcgcacc ttttctaagc atgtggttat caatatcaat gtaattatgc acacaatcaa
     4921 acgctgaaac aactatttta tcccacttca tcgcttttaa aatagtttct gccatgacgt
     4981 aacgattacg cgctgcaaat ttttgtgcaa tttccatgtc atttaaataa ttgtttaaat
     5041 cagagcccgt cacataggat aagtcataat ccaatttcac ttgctcacgc tcaccgttca
     5101 agttgttggc catttctaaa ttgccgcgtt ttttcgcagc agttgcgtct aatttcaatt
     5161 ctttacgcaa tatgtctaat cttttataag ctacttcttg gtggtattct gcaatttctt
     5221 taccaagcac ccgacttcca ctatggatta caaggtaaat accatcagaa ccttgattca
     5281 cttcaataaa atggttcccg ccaccaagcg tccctatact tctagctacc cagccgcgat
     5341 gaattggcgc aactatacct tccaaatcaa attcatctac aggcttatcg tgtgttttgc
     5401 ttccagatgg cacccgttcg cgaataactt tatctagctt atcaaaatcc atttttaact
     5461 tgccaggttt tagttttact acgtacagtc cgcaaccgat gtccactcca accaaattcg
     5521 gtacaatttt atcttgaatt gtcattgtcg ttccaatcac acagccttta ccaccgtgcg
     5581 tgtcgggcat gatccgaatc ttactaccct tcgcaaacgg ttgattacac agcgtaataa
     5641 tttgcccgat ggtattgtcg tccacattat ctgtaaaaac tttcgcttcg ttatattttc
     5701 cttttaatgt tagcatttct attcctcatt ttctgtttaa tagagaaatg aaagtctcca
     5761 cttctcttcc tagctgttaa aattctccag ttctcctatt gtcattcgac tcacttcttt
     5821 caaatttatt tttaggtaaa aaaaaaagtc cctcaatcaa gaaagattga aggacgtaac
     5881 ttttaacgga cgctaccttg aaaagacacc ggttggctat gcaggaacgt taaagaaata
     5941 cctattatct tctgtcttga ttggttgttt ttttctagta tatttttcat tctaagcata
     6001 tccctcagtc ctttcttggt aaaatgtatt tctatattag cacgtttccg cacttgatac
     6061 aacttaattt ttaacgcttt tgaaaataaa atagccctta tcttttgcca ctgtttcaac
     6121 gttgccgaaa acttcttcca ttttcttttc agcagatggg ccgccttgtt tcttttgaat
     6181 aacaatccaa agttctccgg tttcttgcaa gtgatcgtaa gcaccttcta aaatcgcatg
     6241 aactattctt ttccctgcac gaattggcgg attactaata atcgcttggt aatcgttcgc
     6301 agttacgcta tcataaaccg aactttcata gatatgcgta ttcgtaattt tattgatttc
     6361 cgcattttct ttcgcaagtt ccagtgcgcg caaattaacg tccaccattt caatttggct
     6421 atcagggaac gctttcgcta ccgttaaccc catcggacca tagccacaac caacatccaa
     6481 gatttttcct attttcgttt ctaactcaaa agactcaatc aataatctcg aaccaaaatc
     6541 gaccgtattt ttggaaaaca cgccattgtc acttgtaaaa ctcatattaa aaccttttaa
     6601 catcacttgc catgtttttc ggttgtgttt aattgtttcg tcgtttgtgt agtaatgatt
     6661 gttagtcaag aaccgcacct tcctttcgta tctctagcta ttttagcata aaatcttact
     6721 cggatgtagc atttttggta actcatctta aacttgatta attgcaataa aaaagacctt
     6781 agataacaag tatctaaggt ctttaagtta attacttaac ttctacgtta gcgccaactt
     6841 cttcaagttt agctttgatt tcttcagctt cttctttagc aacgccttct ttaagagctt
     6901 taggagcgtt atcaactaat tctttagctt cttttaagcc aagaccagtg atttcacgaa
     6961 ccactttgat tactttgatt ttagaatctc cagcagaagc tagttctaca gtgaattcag
     7021 tttgctcagc agcagcgcca ccagcagcag ctacagctac aggtgctgca gcagttacgc
     7081 caaattcttc ttcgattgct tttactaaat cgttaagttc taatacagat gcttctttta
     7141 cggaagcaat gatttcttca atgtttaaag ccattttgaa attcctccaa taatataatt
     7201 ttttcggatt taaccgagat ttgtttgtag ggtttcccct gggtagaaca gattatgctt
     7261 cttgtccttc tttttggtca gcaacagctt tagtagcgat agcaagaccg cgaactggag
     7321 cttgaagtac gttgcaaagc atagatagca atccttcgcg tgatggaagt gttgcaagtg
     7381 ctttaatttc ttcaagagaa gcaactttac cttcaataac accggctttg atttctagtg
     7441 cttcatgatc tttagcgaaa tcgttaagaa ttttcgcagg cgcaactacg tcttcattac
     7501 tgaatgcgat tgcgttagga ccagttagtg ctccttctaa accttcataa ccgttagctt
     7561 caacagcacg gcgagttagt gagtttttgt aaactttaaa ctcaatacca gcatcacgca
     7621 attgtttacg taattcagtg atttcgccaa cgtttaagcc gcggtaatca acaattactg
     7681 tagacgcact agctgataat tttgttttaa tttcttctac tgcactttgt ttagcttcaa
     7741 gaactttact catttttcca cctccgtcca acaattaaat ctaattaaac agacacaagt
     7801 tccgtttgat cagcaacaaa aaacctctga caccgtagac atcagaggtt tttgtaaaat
     7861 gcacgcggac gcacacttca aaagaaatcc ctcgggtggc aaatttaagc gataaacgcg
     7921 ccaactgtct acggtaagga tatttgattg tttcaactag cctatcttat caaaagacaa
     7981 ggggctggtc aagttaaatt ttataagcta gctgggtcga ctttgattcc aggtccgaaa
     8041 gtagttgtta cggaaagatt tttcacgtaa gtacctttcg cagcagcagg ttttgctttt
     8101 tgtagaacgt cattcacagt acggaagttt tctactagtt tagcagcatc aaaagatact
     8161 ttaccgattg cagcgtggac gttaccagct ttatcaacac ggtattctac tttaccagct
     8221 ttaatttcgt taactgcttt agttacgtcc atagttactg taccagtttt agggtttggc
     8281 attaaacctt ttggtccaag gacacggcct aatttaccaa cttcacccat catgtcaggt
     8341 gtagcaacga taacgtcaaa ttcaaaccaa ccttggttga ttttttcaac gaattcagat
     8401 tcaccaacgt aatcagctcc agcagcctca gcttctttag ctttttcacc ttttgcgaat
     8461 actaatacgc gttgagtttt accagtaccg tttggtaata caacagcacc gcggatttgt
     8521 tggtccgctt ttttagggtc aacgccaaga cggaatgcta cttcaacagt tgcatcgaat
     8581 ttagcgaagt caattttttt agcaagttca actgcttctt ctgcagtgta aactttgttt
     8641 gcatcaattt gttttaaagc atcttgatac tttttgcctt tcttagccat ttcttttcct
     8701 ccttaattgt caaattgtga aacacacgat tagtcttgga tagtgatacc catagaacgt
     8761 gcagtacctt caaccattag cattgcagat tcaacatttg cagcgttaag gtctggcatt
     8821 tttgtttcag caatttcctg tacttgagcg cgagttacag atgcaacttt tgttttgttt
     8881 ggttcaccgg atcctttttc cactttagct gcttttttaa gtaatacagc tgctggtgga
     8941 gttttagtga tgaacgtaaa cgaacggtct tcaaatacag tgatcacaac aggaataata
     9001 agaccagctt gatcggctgt gcgagcatta aactctttac agaatcccat gatgtttacg
     9061 ccagcttgac ctaatgcagg tccaactgga ggtgcaggat ttgctttacc tgctggaatt
     9121 tgaagtttaa cttctttaat cacttttttt gccacgagac atacctcctt aagtccgtga
     9181 tgtggttgac tggggctgat atttcccctc ccacgttaaa acatacgtca aaaacgtact
     9241 tatatatgat accattttaa atgtgtagtt gcaagattat tttatgaatt tactttaaat
     9301 tccattgctt ctttatcgaa ataaacattt ttattttcac gccataaatt caaatacgcc
     9361 gtgtaacctt gtgctgcctt atctatccat gccggattca ctttttttag tagttgtaat
     9421 gttttttcaa aagcgatttt tctggtgtct gcttctaaaa tattatcgtc gtgccgcatg
     9481 tcttctttcc ggtggcgcag ttcaaactcc attcccatat accaacaaat atgcaagaaa
     9541 acctcatatt taaattcgtc aaagtctgtt gttttaaatt cactgttacg tttgccacgt
     9601 tcataaccat aaagcatgta accatcttgt tcactataat ccatacaaag ctcgccaaaa
     9661 cctggcccat cacctaagaa caatgggaaa tcgagttcta aaaaatcggc ttctcgttta
     9721 aattccagat aaatctgctt tgctttgtcc attttgtcgc ctccctaata aaacaacctc
     9781 cacaaataat gtagaggttg cacattttaa agtttttcga tttggttgaa atccacttcg
     9841 actggcgttt cacgtccgaa catgttaacc atgactttcg ctttaccttt gtcgttgtcc
     9901 atttcgtcca ctttaccgga aaagtcagcg aatggtcctt ctttgaccat aactgtttca
     9961 ccaatttcaa agtcagcttc tgcacgtttt tcaaccatgc ccatgctttt aagaatgcga
    10021 tctgcttctt ctggaagtaa tggtgttggc tttgatccag aacctgctga accaacgaag
    10081 cctgtaacac ctggagtatt acgaactaca taccaagaat catctgtcat aacgatttct
    10141 actagtacat aaccagggaa aactttacgt ttaattgttt ttgttttacc atttttcact
    10201 tctgtttctt cttcttccgg tacgataaca cggaagattt tatctgacat gcccattgac
    10261 tctacacgtt tttctaagtt tgctttgact ttattttcat aaccggagta agtatgaact
    10321 acataccaat ttttttccat tatttagttg gcagcaatcc tattttgccg ccatcctcct
    10381 tttagtataa tccaaaataa aaaacccgaa agttgtacgg gttttgtctc aagtaatagt
    10441 atatcattat ctttgtaaaa ttcctagcac tacacgataa gtttaataat ttgttcgata
    10501 ccgaaatcaa ttaacataaa gaataaagca aataaaacta ctgtaataac tactgttact
    10561 gtgtaggtta aaagttcttt tctagttggc cacgtaactt tgtgcatttc ggatgaaaca
    10621 ttccgaaaga atcttgctat tgcagacata ccaaaacctc catatcgtct attttgtttc
    10681 tcgatgtaat atatgtttat tgcagtgtcg gcagaatttc ttcacttcta aacgcgtttc
    10741 tttctgcgtc ccgctaacat tgactgtata gtttcttgaa ccacactcag aacaagcgag
    10801 ggatgttttc ttcttcataa attatctcaa ctccgcaatc attaaatatg ccatgccaaa
    10861 aaataggcac atttcatcca tataaatata acatctggct cttagctagt caattgtttt
    10921 ttcattctag ctgtttcatc attttctttt ttacacgttg taaggcatta tcgattgctt
    10981 tctctttttt gttgaagaaa agcgccattt cttgatagct cttaccttct aaatattgtt
    11041 ttaatacttc tttttcaaat tcgcttgtga cttgttctag ttgacgcgct acatgcgtta
    11101 aatcttcgtt tttgattaaa aagtcttctg gggtttcggc tgctttttcg gaaatcacgt
    11161 ctaataaagt ccagtccata tcatcctcag ctattggtgt atctaatgag acagaattat
    11221 taagcggaat attcttctgt ctagacgccc gcttcaccgc cgaaagaagc tgtctgttaa
    11281 tacacatttc tgcaaaagat cgaaaagaag cttcttttgt tttatcgtaa tcccgaattg
    11341 ctttgaaaag gccaatcatc gcttcttgaa ttaaatcgtc ccgctccgca ccttgcagaa
    11401 aatattgggt tgatttccag taaataacag actgatactt actgaaaaaa tattctaacg
    11461 cttctgtatc accgcttctc gctagttcaa gcatcgcaag ttcttcttgg ttcactgaat
    11521 tatccactag gctaatcggc tcctttacga caggatttct tctatggttg ctccattata
    11581 catagtcaaa aacataccgt caatccctta ctcctcgcct cttctccact tttcgagctg
    11641 tgaaatgaca tcagaatcca gattaaggtt tgatttcggc atttcttcct gaattcgctt
    11701 gattttctgt ccgatttgtt tactcatttc ttgaatttca aaaagtaact ctcgggatga
    11761 aattcgtagt gcaccttgtc caaaaatagc ccactgttct gtatagtcag atgttgctac
    11821 cataatttgc gtccgcacgt ttttccattc aatcgctttt tgttcgatgt actcatctgc
    11881 cgtttcatcc tcatgcgtaa aaacgacttc gacttgatat ttcttgcttt tcctcttcac
    11941 gccccggaca aactgtgcat caaaaacgac cacaacccga tatcctgtat aactttgata
    12001 ttccgccatc cattcaacaa gtttatctct tgccgcttcc aaatcacgat ctttcaagaa
    12061 actaagttct ggccaagccc caatcacatt atacccgtca acaagcagaa tttgttccat
    12121 ctttatttct ccagagggaa acgtttccga taaacttcat aaagtaacaa actagctgca
    12181 actgacgcat taagggaagt aacttttcca cgcattggta aatgaacgag gaaatcacat
    12241 ttttcacgta ctaagcggct catgccaaac ccttcgctac caataacaat agcaagcggc
    12301 atatccacat ccatcgtccg gtaatcgcta ctacctttcg catctgtccc aaaaatccaa
    12361 agcccgcgtt tttgtagttc ttccattgtc cgtaccatat tcgtcacgcg aaccactggt
    12421 acatattcca tcgccccagt acttgctttg gctacagttt gcgtcaaacc tacagagcga
    12481 cgtttcggaa taataatccc atgtgctcca acagaatccg ctgtacgcat aattgatcct
    12541 aagttgtgtg gatcttctaa ttcatccaaa ataatgaaaa atggcatttc atctttcgct
    12601 tcagcagcag cgaataaatc gtctaactcc gcatattgat aagccgccac ttgagctgca
    12661 acaccttgat gcgctccacc tactactttt tcaatctttt gtttaggtac aaattgaact
    12721 tgaattttcc gttctttcgc taatgttaag acttgtttta atacgccttt ttgtgaacct
    12781 tcttgtacgt atattttatg gatatctcta tcagatcgta atacttcaag aacaggattt
    12841 ctcccgccaa tccactcttg ctcattttct tgttccatta gttggtttcc actccttttt
    12901 ctactatttc aagcgccttt tccatccatt cttgtaaacg atccaactca ccagctaagt
    12961 aaagataacc tagcactgct tcaaaagatg tggacatact gtaagttcca gggtcagtat
    13021 ttttaggcac tgtatacgac ttggcattac gcccacgctt tgcaattcta tcttcttctt
    13081 ccgtcaaaaa accttccgca atcatagctt ttagcgccac agcttgccct tttgcagaaa
    13141 cgaattttgt cgccgttttg tgtaactgat tcggttttgt ctttccagca gcaagtaaat
    13201 attcgcgaat aaatttttca taaactgcgt cacccatgta agcaagcgcg aggccattaa
    13261 gttgtttata ttctttcact tctgccatga tttacccccg tctaaaccgc gtgccttgcg
    13321 cagtgtcttc caaaataata tttttttctt ttaaaatgtc tcgaatttca tcagcacgtg
    13381 caaaattacg ttcgtttcgc gcttgcagac gttcttcaat taacgcttct acttcgctat
    13441 catccagcga atcagtttgc gtattttcta atttcaagcc taatacttcc gcaaacaaac
    13501 gcatcatgct taagaattcg cgcagaacat tgatagaaac agtttcttta gccagataaa
    13561 tattggcacg ctttgcaagt tcgtgaaaag tagtaattgc atttgccgta ttgaaatcat
    13621 catccatatc atcttcaaaa gcttgtttta attccgttag ctgttctagc cactcgtcct
    13681 catgcgcttc ttccacatat tcaccgtcat ctgtttgaat acgatgatca atattttggt
    13741 atgcaatcat taaccgttcc aaaccatttt tcgcatcttc taaaattgca tcattcagtg
    13801 taattggctt ccggtaatgt acagatagca tgaagaaacg aatcacattt ggatcattgt
    13861 cttttagcac atcatgcagc gtaataaaat tcccaagtga tttggacatt ttttccccat
    13921 caatatttaa aaaggcatta tgcatccagt agttcgcgaa cgttttccca gttgccgctt
    13981 cggattgagc aatctcatcc tcatggtgag ggaatactaa atcttgccca cccgcatgaa
    14041 tatcaatcgt gtcaccaaga tattttttcg caagcgccga gcattcaata tgccaacccg
    14101 ggcgcccatt accaaacgga ctttcccaga aaatttcacc cggtttagcc gctttccaaa
    14161 gggtgaaatc aagttcatct tgcttacgct cattatattc aacccgagcc ccgtgctgca
    14221 attccgataa ttcttggcca gatagtttcc cgtaatcttt gaattttttc gtccggaaat
    14281 acacatcacc agccgactca tacgcatagc ctttttcaat tagcgtactg atcaattgaa
    14341 taatttcatc catattctcc gttacacgtg gattcacagt cgctttcgcc acattcagtt
    14401 gatctacatc atcaaagtaa gccccaataa aacgatccgc cacttcggga accgtcaact
    14461 ttagctcatt tgccgcacga attaatttat catccacatc cgtaaaatta gacacgaatt
    14521 tcacatcata accacgatac gtaaaataac gtcgaactgt atcgaaaaca ataattggcc
    14581 gcgcattccc gatatgaatg tagttataca cagtcggtcc gcaaacgtac attttcactt
    14641 cgccatcttt gagtggttta aaaggctctt tctctcgttt taacgtatta aaaatttgta
    14701 tcgacaatca gatctactcc ttttccttca aaagtttttc tactatattt tctaattccg
    14761 caattcgtaa tgtcagttca tccattttag gaaccgcatg tcctaccgta cgaccattca
    14821 aacgaacaac cttagcagga atcccaacaa ccgttgcgcc tggaggtaca tcttttaaaa
    14881 cgacagctcc tgctccaata cgcgctcctg ctccaatttc caccggccca agtactttcg
    14941 ctcctgccga aacaagcgcc ccgtcaccga cagttggatg gcgtttcccg caatcttttc
    15001 cagttccacc tagcgtaact ccgtggaata tcgttacatc atccccaatt tctgctgttt
    15061 caccaataac aattcctgca ccatgatcaa taaaaagcct tctaccaata gttgcgcctg
    15121 gatgaatctc tatattagtc cagaaacgag cgttctgcga taatactttt ccaaacaaaa
    15181 ccattttatg acgataaaaa aagttcgcca cacgatgcca ccaaagtgcg tgcaatcccg
    15241 gattcgttaa aaaagcatca aaaaagcttt tcgtcgcagg gtcattcttt ataattgttg
    15301 caatatcttc ttttaagcga gttggcattt tgttgcctcc ttattcaagt tcgtacattt
    15361 tttcattgga acctacgcca acaaaaaaag cccctccgat acagagacgc tttgcgcggt
    15421 tccactctga cttgagtact gccaatttta gcaaatactc caactctagg ggtgggggta
    15481 acgacccaca tttcgtctga cgatactaaa tttcccatca gaattcaggg aggcatttca
    15541 ggagtgttca gctaagtcgc ttccagccat ggcgactctc tctataaact tagaattccg
    15601 tacttcttcc catcatcact ttttccgtat atttagttct attataacag caataaaatt
    15661 ccttgcaact gaaatatatc aaaataaaaa agcaccccgc aaatagccga gatgctttca
    15721 ttcaaaatta attatttttc aaccatgtat ccaaacgatt aagcactttt tcacgaccaa
    15781 gaacttcgat tgcaagtggc aattcaggac catgcatttc acccgttgtc acaatacgaa
    15841 ttggcataaa taaaccttta ccttttacgc ccgtttcttt ttgaacccgc ttgattgccg
    15901 cttttacttc cgcagcttct agaacttcta gtgcttctaa ttcttttttg aatgctgaaa
    15961 taacagttgg aactgtctct tccgcaagca ctgctgtctc ttcttcatca aacgtaattg
    16021 actctgcatc cgcaaagaac atttctgaaa gtggcacaat ttccgcacca tagctcattt
    16081 gctcatgata aagtgacact aatttgtgca cccaatcaag ttcagcttga tctaactcag
    16141 cagatacaac acctgctttt tgtaaatgcg gtagcgatag ttctactaca tcatttagtg
    16201 gtaatttttt cacatattgg ttattcaccc aagtcaattt aacattatca aataatgctg
    16261 gtgatttaga taaacgcttc ggatcaaaca ttttaatgaa ttcttcttta gagaaaattt
    16321 cttcttcccc ttctggagac caaccaagca tagcaataaa gttaaacaaa gcttctggta
    16381 aatatcctaa atcgcgatat tgttcgataa attgaataat cgaaccgtca cgtttactta
    16441 atttacgtct gctctcattc acaataagtg tcatatgacc aaaaattggc ggctcccagc
    16501 caaatgcatt ataaatcaaa atttgcttag gcgtattcga aatatggtca tccccacgaa
    16561 gaacatgaga gatttccatt agatggtcat ccactgctac agcaaagtta taagtcggaa
    16621 ttccatcttt tttcgcaata acaaaatcgc ctattccatt tgattcaaaa gaaacatcgt
    16681 ctttcaccat atcgttaaaa gtgattgttt catttgctgg cactttgaaa cgaatacttg
    16741 gtttaaaacc ttgcgcttct ttctccgctt gttgttcttt tgttaaatga cgacatttcc
    16801 cgctataacg aggcatttca ccgtttgctt tttgtttttc acgttcagca tccagctctt
    16861 cttccgtaca ataacattta taagccaaac cttcatccag aagttgttga attaacggtt
    16921 cataaatgga ttgacgttcc gattgacggt aaggtccgta ttttccagga acatccacac
    16981 cttcatccca gtccatacct agccatttca aatttgtcat ctgactttct tcaccgtcag
    17041 ctatgttacg tttcgcatcc gtgtcttcaa ttcgaatgat aaaatctcca tcattatgtc
    17101 ttgcaaataa atagttaaat agggcagtac gcgcattccc aatatgcaaa aatccagttg
    17161 gacttggtgc ataacgtaca cgtactcgtt ttgtttcact cacaattatt cactccttca
    17221 attatttttc aagtaagaca acggctagac ttgcgatgcc ttcttcccga ccagtaaacc
    17281 ctaatttctc tgtcgtagtc gcctttacat taacttgggc tgaatccgca tgtagcaact
    17341 ccgcaattcg aagcttcatt tgctccacat atggcgccat ttttggcttt tcagcaataa
    17401 tagtagcatc tagatttcca agacgaaaac catccgcctc taccttctgc caaatttccg
    17461 caagtagctc agctgaatcc gcatctttaa aagccatatc tgtgtccgga aaaaaatgac
    17521 caatatcacc agcaccaatt gcgcctatga tagcatcagt aatagcatga agaagtacat
    17581 ccgcatcact gtgacctagt aaccctttct cataaggaat tttaatcccg ccaacaatca
    17641 gttctcggtc ataagcaagt ttatgtacat cataaccttg gccaattcta atcatttgct
    17701 atccctccaa gttcccctaa aatcgcctta gcgagcggca tatcttcagg agttgtcagc
    17761 ttaatattat aatagcttcc ttggacaata gcaacaggac aaggaagtcg ctcaaccaga
    17821 ctagcttcat ccgttcctaa aaactgttct tttcgagcaa gctgatgcgc ttttcgtaaa
    17881 ataggcagtt caaaagcttg cggcgtttga acttgccaaa gattttcacg gtcaacagtt
    17941 tcttgaacga cacctttcac cactcgtttc accgtatctt ttacttttac tgcacaaatc
    18001 gcggctttac tttgctctac accaattaat aatcgatcaa taatatctaa cgtgataaac
    18061 ggtcttgcgc catcatgtac taagacaacc cgctccgtcc cacaacgttc aagacctgct
    18121 gccacactat attggcgttc acttccgccc ttcacaatct caattcggct ttcagcaacg
    18181 ttaagctgac tcattaattc tttcacatgc tttctttcct cttcttgact cacaacaatc
    18241 actttggaac aacgattatc tgctaaaaaa ggacgcaagg catgaatgaa aattggttca
    18301 ccaactaact ctagccacat tttatttttc tgggcattca tccgttttcc ttgacctgcc
    18361 gctaaaaaaa ccaactcata attcatgctt atttcctcct tttaatcagg atggtttagc
    18421 aaaaatcatt cttcctgctg atgtttgaag tacactcgtt acttccactt ggattgtttc
    18481 attaataaat ttacggccat cttctacaac aatcatcgtt ccatcatcta aatatgcaac
    18541 gccttgattg tgttctttac catctttcac catgagaaca gtcattttct cacctggcaa
    18601 aacaactggt tttacagcat tcgccaaatc attaatattt aaaaccggta cattttggaa
    18661 ttcacatact ttgttcaaat tataatcatt tgtaacaaca ataccgccca ttactttagc
    18721 aagtttcaca agtttactat ccacttctgg cgtatcttca aaatcacctt catacatttc
    18781 cacttgaata gcctcttctt tttggattcg atttaaaata tctaatcccc ggcgccctct
    18841 tgtacgttta agcgtatcgg atgaatccgc aatatgctga agttcggcta acacaaatag
    18901 tggaataacc accgttccat ctaaaaatcc agtagtcaaa atgtctgcaa tacgaccatc
    18961 aataattaca ctcgtatcca aaattttata tgttttctta gatttctctt ctgttttctc
    19021 ttcttctggt gttcttttct ttgcatttct gttattgaca aaatttccaa attcgttgcg
    19081 acgactaatt ccgatacgga accctaaata acctagaact aatgttaaaa taactggtac
    19141 tactgaattt aaaagcggaa tatttgtttg acttaatgca ttgctcgcga aaaacgcaat
    19201 gaccaaacct acaaataaac caagtccccc ataaacaagg gttgcaatag caattttagc
    19261 taacttttcc tctaaccaat taagtgcggc ttctacatat ttcaccgccc agaaagtaat
    19321 aagataaaat ataagtgcac caatcagagc atcagtataa ggattattaa ttagcagaat
    19381 gtgacctatt ccaagtttca cccatagagc aggtagtgaa aagactc
//
LOCUS       DASDYK010000043        19196 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.043, whole genome shotgun sequence.
ACCESSION   DASDYK010000043 DASDYK010000000
VERSION     DASDYK010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 19196)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19196)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19196
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.043"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..406
                     /locus_tag="U0308_001529"
     CDS             <1..406
                     /locus_tag="U0308_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2316496.1"
                     /translation="SISNIEFKELNLAKGQFIYLVRICENQGIIQEKLVDILKIDRTT
                     ASRAIKNLEKNGLIIKKQDKNNKKNKLLFPTEKGQQLYPLIIRENEYSNAVALKGFTE
                     AEINMLADALKKVKENIADDWLYVKKGNKRSY"
     gene            422..928
                     /locus_tag="U0308_001530"
     CDS             422..928
                     /locus_tag="U0308_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2316497.1"
                     /translation="MIKLCTISDSQALLEISYKTFDETFRAQNKPENMDAYLKTNFTA
                     KKLSDELKNTHSYFYFVFHQEAIAGYLKLNIGDAQTEEIAGNTIEIERIYVLKSFQKK
                     GLGKELFNQAIEIAKEVDAERIWLGVWEKNKNAIQFYAKLGFIKNGQHDFFMGDDCQT
                     DIIMIKDL"
     gene            complement(952..1365)
                     /locus_tag="U0308_001531"
     CDS             complement(952..1365)
                     /locus_tag="U0308_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2316498.1"
                     /translation="MSFAVPYLVFNGEGQDALTFYADVFQAEITSVQRFKEMNNFDGN
                     AVFGERLMHSRLAKNGEEFIYITDAPYDGFTIGNRVTILINFETEEDIKYAYEVLSAT
                     GKVEMELQVAFWGSTYAQVTDQFGVFWQLNFDKKS"
     gene            1590..4220
                     /locus_tag="U0308_001532"
     CDS             1590..4220
                     /locus_tag="U0308_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HEM2316499.1"
                     /translation="MLWVKESIEQLLSKLHTNLDTGLTKEQVKQKHAEFGTNEFEEGK
                     KESLLQKIGHHLVEITTIVLLFAAAISAYLAITTGYGWAKVVVILGIVVLNMVLGIYQ
                     ENSAEKALAALQSMNAHLTTVVRDGVRMQVDATELVPGDIIEIVAGDMIPADARIISS
                     SSLQVEESALTGESVPVEKDANAVVSEKAPIGDRLNMLYSGCLVTNGRATAVVVEIGM
                     ETEMGKIAGLLNSTSKLMTPLQLRLKELAKRLSIVALLAGILIFIIDVYVYGETIIET
                     LMIAISLAVAAVPETLPVIVTLTLAYGVQNMVRKNTIIRRIPAVETIGNTSVICSDKT
                     GTLTQNKMIIQQIWAADHAPIKATAEFDTAEQKVLEMLSLSSNATIDVTDGEETIIGD
                     PTESSIIRLLEEKGTTKKALEAKYPRVFELPFDSDRKLMTTIHQVEDGFLSITKGAFD
                     RIPVNFSEAFLAEAERVHDSFAEDALRVLVVAYKKYPEMPTDLSSEALETDLTFAGMV
                     GMIDPPRPESKAAVLAAKKAGIKTVMITGDHIVTASAIAKEIGILTDGDKAITGAELA
                     EMSEADLEKNIRDYAVYARVSPEDKIRIVKAWQKNGEIVTMTGDGVNDAPALKAADVG
                     AAMGITGTDVSKNAADMVITDDNFATIVDAVKEGRTAYENIRKTIYFLLSTNFSQIFI
                     MLIAIILGWGAPVVAVQLLLINVVSDGIPGFFLSREKADDSIMERKPIPKNAGIFANG
                     LGKKMATQAVVFTIVTLAGFYIGQFVTINNSIGASYEVGMTMAFVILAWSSVAHIFNV
                     RSDKSIFTIGFLSNRGLFFSAICSMLIILGLAIIPPLANMFFLVEMSLTHWILAFILS
                     MFPLLFVEIQKLIQRKRAKA"
     gene            4235..5083
                     /locus_tag="U0308_001533"
     CDS             4235..5083
                     /locus_tag="U0308_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316500.1"
                     /translation="MNETEKLVAALLERNFGKNIGTRYPDNEAAQMRAEEVIGEIAIV
                     IAPLVEKLGIESKTVKKTIPFLYELQKNQFCDMSAYPYPLLLVNGTSADTEKYWRDLP
                     TYWTDDANKIVLPYVLEHIKNNKVRQKLLAFHAWLIGEVVEMNEELGADFRIKLVFES
                     DMRIRLRVYDVEQIAIEVHFLDNHDTEQQHLGYDVSLDVDITDKARLLLRQGILTENL
                     GLEALKAYMKSVLPIAHSLKNLEYLTVEDTKKLTKLLTQEEPKIMEDTDLTSKALDFL
                     QKAAQQ"
     gene            5193..5750
                     /locus_tag="U0308_001534"
     CDS             5193..5750
                     /locus_tag="U0308_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2316501.1"
                     /translation="MIRHAKKSDAPKIAPLLLVIWKDMELPILEVETEEAITNALIEA
                     IQTEDYRYSYRHLHVYEKDGDIAGVLAGYPGKIEPEIDRAWNEIAKKHGIRYEEPIFA
                     DKETFPGEWYLDSIVTNEKYRGHGVGTALLAKLTEIAAEDGEKVVGLNCDKGNPHAKR
                     LYERLGFHVTGEIILSGHEYEHMQK"
     gene            5767..6429
                     /locus_tag="U0308_001535"
     CDS             5767..6429
                     /locus_tag="U0308_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3153 domain-containing protein"
                     /protein_id="HEM2316502.1"
                     /translation="MKKIIFAVVLSLVLILAGCADVTNTVKVDKKGEATISFDIDISS
                     VAGIFASSYSDEVEAKLKEAGFTVDKKSNTSYHIEKKLDKNETTKSDMKPEDFGVKIT
                     NSKSFFTQKIKVDADIDIEKIWKKEVADVPFPKEILSQVDYTFILDLPISSIGENNAK
                     SVDGGKLTWDVPLDKKSEMYFEVTVPNVKNIAIVGGILLVAIIGLLIYLIKRHRKKKK
                     QL"
     gene            complement(6445..6834)
                     /locus_tag="U0308_001536"
     CDS             complement(6445..6834)
                     /locus_tag="U0308_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2316503.1"
                     /translation="MQQTIKEASEHTGLSAHTIRYYEREGLIPFLARDKNNNRIFDND
                     ALHWLELLTCLRVTGMPLAKQKEIVELTKGGDGTVSERIAVLKEHQQDMYRRQAELDR
                     AFKKIEKKLACYEELEQAVNKSVDQFS"
     gene            6955..7779
                     /locus_tag="U0308_001537"
     CDS             6955..7779
                     /locus_tag="U0308_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2316504.1"
                     /translation="MNLKDTVKLANGVEMPRLGFGVWKVQDGDEAVNSVKWAIEAGYI
                     SIDTAAAYKNEEGVGQAIKESGVKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELD
                     YVDLYLIHWPVKGKFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIAPMVN
                     QIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGKLLSNPEIKAIADAHGKSVAQVILR
                     WDLQIGVVTIPKSVHQERIIQNADIFDFELSEEEVAKISGLNKDERTGPDPDNFNF"
     gene            7858..8826
                     /locus_tag="U0308_001538"
     CDS             7858..8826
                     /locus_tag="U0308_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlkZ family DNA glycosylase"
                     /protein_id="HEM2316505.1"
                     /translation="MDAKTIIENRFQSQKLIQTAWSDSPERIVFHFGAMQSQNYGQSL
                     WAVGSRMTTPSEKAVEQAINNGEIIRTWLLRGTIHLFSAKDYHWMMDLIAPSIDKICK
                     PYRAKLGLTDEVLHKATEVVSEIVSEQAVTRKDLAAHLATKDLPSAGIPFAQLLVYLS
                     SRKVICSGPNETFRNTMHIPADTNHFTREEAIKELAKRYIQSHAPATLKDFCFWSGLT
                     VTDAKIGIADMPKMGDYYITTLVENGTMPTTIPLAGFDEWIIGYRDRSVVLPEIWHDE
                     IMTKNGIFRPAIITEGKVVGKWEKPKKRAELDGDFWDRYIQFRNML"
     gene            8867..10147
                     /locus_tag="U0308_001539"
     CDS             8867..10147
                     /locus_tag="U0308_001539"
                     /EC_number="1.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase,
                     degradative"
                     /protein_id="HEM2316506.1"
                     /translation="MNAFDKFYKKTVEERRAILAEYADLNEEEQAFLASTGALSFDKA
                     NHMIENTIGIYSLPLGLGMNMLLNDKHYVVPMVMEEPSVVAAQSAGAKLIGQNGGITG
                     SATKRKMIGQIELISVSDIQAAKENIIANEEQLIAIANQAHPSLQKRGGGAVEIQVRT
                     AQTANDETLLIVHLLVDTQEAMGANMVNTMVETLAPELEMLTNGTANMRILSNLVDEA
                     TATAVCRINPESLATKTQSGEWVRDRIIAAYEFADADIYRAATHNKGIMNGIDAVIMA
                     FGNDWRAVEAASHAYAARTGSYKPMSKWSKDAEGYLVGELTLPMPVAFVGGSIGIHPI
                     ATLSKKIARVESAKELAMLVCAVGLTQNLAALKALVTEGIQRGHMSLQAKSLAMTAGA
                     EADEIEKVATFLQESKQLNVVAAKEFINKLRSGK"
     gene            10346..11980
                     /locus_tag="U0308_001540"
     CDS             10346..11980
                     /locus_tag="U0308_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HEM2316507.1"
                     /translation="MGDINIQQMIFQFIGGLGIFLFGIKYMGDGLQMAAGDRLRDILD
                     KYTTNPFMGVLAGILVTVLIQSSSGTTVLTVGLVSAGFMTLKQAIGVIMGANIGTTVT
                     AFIIGIKLSEYALPIIAAGAVLLFFFKNHKVKNIGQVFFGFGALFYGLDLMGQGMKPL
                     AGMESFHELTAQMSTNPFLGLLIGTIFTAVVQSSSATIGILQELYGQGAIDLQAALPV
                     LFGDNIGTTITAVLAAIGASVAAKRAAATHVIFNLIGAIIFMLILPLFTSLVTYLQGL
                     FGLNPEMTIAVAHGTFNITNTFIQFWFIGAFAWLVTKLIPGDDSRIDYKTKHLDTNLI
                     DQSPGIALEMAREETLRMADYAKFGLQEARQYLVNRESKHAESTIQVEEAVNNLDRKI
                     TEYLTKISSVALTNNETEEHALMLDTVRDIERVGDHMENIVENIDQLIKNKAKMSEEA
                     SDQLIEMFELTTANFERAVKSMHKKDRALAEETILVEKDIDKAERRLRKNHIRRLNEG
                     KCQVVSGILYIDIVSDLERIGDHANNIAESVLELNE"
     gene            12134..15781
                     /gene="nifJ"
                     /locus_tag="U0308_001541"
     CDS             12134..15781
                     /gene="nifJ"
                     /locus_tag="U0308_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HEM2316508.1"
                     /translation="MRNRKTMDGNTAAAYISYAFTEVAAIYPITPSSTMAELVDEWSS
                     KNKKNLFNEPVKVVEMQSEAGAAGTVHGSLQAGALTSTYTASQGLLLMIPNMYKIAGE
                     LLPTVFHVSARTISAASLNIFGDHSDVMAARQTGFAMLAEGSVQEVMDLSAVAHLASL
                     KGSLPFLNFFDGFRTSHELQKVEVLEYDELENLLDKEALQQFRNRAMTPNNPKTLGSN
                     QNPDIFFQQRETVNRYYEEIPNMVQNYMKEINQLRGTDYDLVNYYGAEDATDVIVAMG
                     SVTPVIEQVIDYLTTEGKKVGLLNIRLYRPFPAENFLAKLPKTVERVAVLDRTKEPGS
                     GGEPLLLDVQSVLYDSETRPLVIGGRYGLGSKDVTPDQILGVYSHLTTEKPKPRFTIG
                     ITDDITNLSIENAGPSDLTSEKTFQCKFWGFGSDGTVGANKAAIKIIGDNTDLYAQGY
                     FSYDSKKSGGLTVSHLRFGEKRIRSAYLIQQADFVSCSTSAYLRSYDLLKGLKPGGTF
                     LLNTIWEGEQLERHLPAAMREYIAKNNIQFYTLNAMRIAGEAGLGRRINTVMQTAFFR
                     VTDILPFEKALADLKESAIATYGKKDMAVAEKNILAMDQTVANLHKVEVPASWANPVV
                     TAETNATTEKPAYVQNILEPVNRLEGDNLTVGDLISNGMVSGAYPPGTAAYEKRGIAL
                     EVPEWISENCTMCNECAFVCPHAAIRPILTDEEEMESAPEGFMTREMRGKDGLRYRIQ
                     VSPMDCTGCNLCAETCPAKDKALVMKPFEEVTAKENPNWSFAINVKPKKNPGKKNTVP
                     GSQFEQPLLEFSGACAGCGETPYVKLLTQMFGDRMMIANATGCSSIWGASAPATPYTV
                     NDKGHGPAWGNSLLEDNAEYGYGMYLANQTMRKALNNKVTKALREEAMSETLREALID
                     WQTQMDVSEDTRERAEALQLALLSEMEGNEALESIYNDRELFIKRSQWMLGGDGWAYD
                     IGFGGIDHVLASGEDVNIFVMDNEVYSNTGGQSSKATPTAAIAKFASGGKSVGKKDLG
                     IMAMSYGNIYVAQIAMGANKRQTLKAIEEAEAYPGPSLIIAYTPCINHGISSGMKTML
                     SETQKAVECGYWSLYRYNPALEEKGKNPMTMDYKKVDFDQFEDFLKRETRYSALYKAN
                     PDVATKLSEKTRLDAEKRFKRYATMAGLDLEKIWKKKEATEDVKAPVDDERAARKAAR
                     EARRLAREQGK"
     gene            complement(16031..17992)
                     /locus_tag="U0308_001542"
     CDS             complement(16031..17992)
                     /locus_tag="U0308_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1,6-bisphosphatase"
                     /protein_id="HEM2316509.1"
                     /translation="MKTIDMKYLRLLAKEYPTIAKTATEIINLEAIMNLPKGTEHFLS
                     DVHGEYSAFEQVLRNGSGVVKRKIRDIFGAELDDAEINSLSTLIYYPEEKMDLLASET
                     EDLQAWYRTTLFRLIELCQYVASKYTRSKVRKAMPEDFAYILEELLHENYNEDDKKLY
                     YEEILQHIISLGRAEEFISALSLLIQQLVVDHLHIVGDVYDRGPYPDKIMDTLMNYHS
                     LDFQWGNHDILWMGAASGSRVCAANVIRISARYLNLDILEDSYGISLRPLALFADEVY
                     KDDPCTYFQPKNEENINYSNAEITQIARMHKAISIIQFKLEGEIINRRKEFDMDHRLL
                     LQFIDYKKGTIHLKGKEYLLLDSHFPTINPEKPYELTDAERELIGKITAAFKNCRRLQ
                     KHVQFLYSKGSMFLTYNGNLLYHGCIPLHEDGTFMEMKLRGEKYAGRSLLEQFEILTR
                     EAYVRPTGTKEKKYACDIVWYLWTGAISSLFGKSEMTTFERYFVAEKETHTEEKNPYY
                     KLRNNELICKQILEEFGLDGECGHIINGHTPVKEGKGESPIKANGKMLVIDGGFAKAY
                     HKETNLAGYTLLFNSYGLQLVSHQPFTTKEDAIKNETDILSTRQVIEMEINRKRVRDT
                     DIGAKLSEQAEDLKLLLDAYRNGLLHENR"
     gene            complement(18107..19018)
                     /locus_tag="U0308_001543"
     CDS             complement(18107..19018)
                     /locus_tag="U0308_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HEM2316510.1"
                     /translation="MEFLLILLPVFGIFAIGFIGQKTLKFDIPNLSKLTLYLMSPFLA
                     FNTFYTNALTIDYAYLAIYIFALCLSLILLVSLISFLLGYNLQDRCALILASAFMNNG
                     NYGTPVVLLVFGAVGLDIAVVLMVLQQLAMSTIGIYFAAKGSKDANGMKTVMKRVVRM
                     PIAYGALLGLTLQLLHVSLPSALMTCVKLVGDAAIPTIMIVLGMQLAVISFRRIELTK
                     VGIALVLKLLIAPIIAFGLTLILPVDEMTKQIMILLAAMPTAANTTLMAVQFDTKPDL
                     VSSATFISTVLSIITLPIVLYFLHPVF"
BASE COUNT         6432 a         3410 c         4013 g         5341 t
ORIGIN      
        1 ttcaataagt aatatcgaat ttaaagaatt aaatctagca aaagggcaat ttatctatct
       61 agttagaatt tgcgagaacc aagggattat tcaagaaaaa ctagtagata ttttaaaaat
      121 cgatcgaacc actgcttcga gagctattaa gaatttagag aaaaacggtt tgattataaa
      181 gaaacaggat aagaataata aaaaaaataa actattattc ccaacagaga aaggacagca
      241 actatatccc ttaattatcc gcgagaatga atactccaat gcagtagctt taaaaggatt
      301 tactgaggct gaaattaata tgctcgccga tgcgctcaag aaggtcaaag aaaatattgc
      361 agatgactgg ttatatgtta aaaaaggcaa taaaagaagt tattaatttg gaggaaaagt
      421 aatgataaaa ttatgtacaa taagtgattc ccaagcactc ttagaaataa gttataagac
      481 atttgatgaa acattcagag cgcaaaataa accagaaaac atggatgcat atttaaaaac
      541 aaattttacg gctaaaaaat taagcgatga actaaaaaac acacattcct atttttattt
      601 tgtttttcac caagaagcta ttgctggtta tttaaaacta aatataggag atgctcaaac
      661 agaagaaata gctgggaata caatcgaaat agagcgtatt tatgtattga agtcattcca
      721 aaaaaaggga ttaggtaaag agttatttaa tcaagcaata gagatagcga aagaagttga
      781 tgcagaaaga atatggttag gtgtttggga aaagaataag aacgctattc aattttatgc
      841 aaagctgggt tttattaaaa atggacaaca tgattttttc atgggcgatg attgtcaaac
      901 tgatattatt atgataaaag atttataaaa aaagttgagc gcatactaag ctcaactttt
      961 tttatcaaaa ttaagctgcc aaaacacccc aaactggtcc gtcacctgcg cataggtcga
     1021 accccagaac gccacttgca actccatttc cactttgccc gtagcactca aaacttcata
     1081 ggcgtactta atatcctcct ctgtttcaaa gttaatcaag attgtcaccc gattgccaat
     1141 tgtaaaacca tcataaggcg catcggtaat ataaataaat tcttccccat tttttgctaa
     1201 acgactatgc atcaatcgct caccaaaaac ggcattgcca tcaaaattgt tcatctcttt
     1261 aaaacgctga acgcttgtaa tctcagcctg aaacacatcc gcataaaatg ttagcgcatc
     1321 ttgaccttct ccgttaaaaa ctaagtatgg aactgcaaaa gacatctcat catctcctat
     1381 acaattaata gctttagtat aagcctaatc tactgcgaag tcatgtctca aaataataag
     1441 gatttgtgaa taaaaacaaa atacttgcaa ataaacgtga tatattatac aattacacta
     1501 agaaatcgga tatatttaaa ttaatatttt tttgcaataa aataaagtaa gtacttgctt
     1561 ttgggagtag gtgcgtagga ggtagatgta tgctttgggt aaaagagtca attgagcaac
     1621 ttctcagcaa actacacacg aatttagaca cagggttaac gaaagaacaa gtgaaacaaa
     1681 aacatgcaga gttcggaacg aatgaatttg aagaggggaa gaaagaatca cttcttcaaa
     1741 aaattggtca ccatttagtt gaaattacga cgattgtgtt gctttttgca gcggcgattt
     1801 ccgcttattt agcgattacg actggttatg gttgggcgaa agtggttgtt attttaggaa
     1861 ttgtcgtgtt gaatatggtg ctcggcattt accaggaaaa cagcgccgag aaagcacttg
     1921 cggcacttca aagtatgaat gcgcatttaa ctacggtcgt tcgtgatggt gtgcggatgc
     1981 aagtggacgc aacggaatta gtaccagggg atattattga aattgttgca ggagatatga
     2041 ttccagcaga tgcacggatt atttctagta gcagtttgca agtcgaggaa tctgcgttaa
     2101 ctggtgagag tgttccagtt gaaaaagacg caaatgcggt tgtttcggaa aaagcgccaa
     2161 ttggcgaccg tctgaatatg ctttactcag gctgccttgt aacgaatggg cgcgccacgg
     2221 cggttgtcgt agaaattggg atggaaacag agatggggaa aattgctgga cttttaaaca
     2281 gcacctcaaa actgatgacg cctttacaac ttcgcttaaa agaattagca aaacgactta
     2341 gtattgtagc acttttagca ggtattttaa tttttatcat tgatgtatat gtttacggtg
     2401 aaacgattat tgaaacgttg atgatcgcga tttctctagc tgtagcagca gttcctgaga
     2461 cattgccagt tattgtgaca ttgacacttg cttacggcgt tcaaaatatg gtgcggaaaa
     2521 atacgattat ccgccgaatt cctgcagtag aaacaatcgg aaatacgtct gttatttgtt
     2581 ctgataaaac aggaacatta acgcaaaata aaatgattat ccaacaaatt tgggcagcag
     2641 accacgcacc gataaaagca acagctgaat ttgatactgc agaacaaaaa gtattagaaa
     2701 tgttgagcct ttccagtaac gcgacgattg atgtaacaga cggcgaagaa accatcattg
     2761 gtgacccaac cgaaagctcg attatccgtt tactagaaga aaaaggaaca acgaaaaaag
     2821 cattggaagc caaatatcca cgcgtgttcg aacttccttt tgactcagat agaaagctaa
     2881 tgacgacaat tcaccaagta gaagacggat ttctttccat tacaaaaggt gcttttgacc
     2941 gaattcccgt aaacttttcc gaggcgtttt tagcggaagc ggagcgggtg catgacagtt
     3001 ttgcggagga tgcacttcgg gtgttagttg ttgcctataa aaaatatccg gaaatgccga
     3061 cagacttgtc tagtgaggcg cttgagacag acttaacgtt cgcgggaatg gtcgggatga
     3121 ttgacccacc gagaccggaa agtaaagcgg ctgtgttagc ggcgaaaaaa gcgggtatta
     3181 agactgtaat gattactggt gaccatattg taacggcatc agcaattgca aaagaaattg
     3241 gtattctaac ggatggggac aaagcgatta ctggagcaga gcttgctgaa atgtcagaag
     3301 ctgatttgga gaaaaacatt cgagattatg cggtatatgc gcgtgttagt ccagaagata
     3361 aaattcgaat cgttaaagct tggcagaaaa atggtgaaat tgtcacgatg acaggtgatg
     3421 gtgtaaatga tgcaccggct ctaaaagcag cggatgttgg tgctgcaatg ggaattaccg
     3481 gaacagatgt atctaaaaac gctgcagata tggttataac agacgataat tttgcaacga
     3541 ttgtagatgc agtcaaagaa gggcgtacag cctatgagaa tatccgcaaa acgatttact
     3601 ttttactaag tacaaacttt tctcaaattt tcattatgtt aattgcgatt attcttggct
     3661 ggggcgcgcc ggttgtagct gttcagttgc tattaatcaa cgttgtgtct gatgggattc
     3721 caggcttctt cttaagtcgt gaaaaggcag atgactcgat tatggagcgt aagccaattc
     3781 caaaaaatgc agggatcttt gcgaatggac ttggcaagaa aatggcgaca caagcggttg
     3841 tctttacgat tgtgacactt gcaggatttt atatcgggca gtttgtaacg attaataatt
     3901 cgattggtgc aagctatgaa gttggaatga caatggcatt cgttattcta gcatggtcat
     3961 ctgtcgcgca tattttcaat gtaagaagtg ataaatcgat tttcactatc ggatttttat
     4021 ctaaccgtgg tttgttcttt agcgcgattt gttcgatgtt gattatttta ggacttgcga
     4081 ttattccacc acttgcgaac atgttcttct tagtagaaat gagcttaacg cactggattc
     4141 tcgcattcat cctctcgatg ttcccactcc tattcgtaga aattcaaaag cttattcagc
     4201 gaaaaagagc aaaagcttga aggagggcaa ctatatgaac gaaacagaaa aattggtagc
     4261 cgcattatta gagcgtaact ttggtaaaaa cattggtaca cgctatccag acaatgaagc
     4321 ggcgcaaatg cgggccgagg aagtaatcgg agaaattgct attgttatcg caccacttgt
     4381 tgaaaaactt ggaatcgaaa gtaaaacggt gaaaaaaacg attccatttt tatatgaact
     4441 tcaaaaaaat caattttgtg atatgagtgc ctatccgtat ccgcttcttc tagtcaatgg
     4501 aacgagtgcg gatacagaaa aatattggcg agatctacca acttactgga cagatgatgc
     4561 aaataaaatt gtgctaccat atgttttgga acacattaaa aataataaag tacgtcaaaa
     4621 actactagct tttcatgctt ggcttatagg ggaagtagta gaaatgaacg aggagctagg
     4681 ggcagatttt cgtataaaac tagtctttga gtcagatatg cgcattcgtt tacgggtgta
     4741 tgacgtagaa cagattgcca ttgaagtaca ttttttagac aatcatgata ccgaacaaca
     4801 acatttaggc tatgatgtga gtttagatgt agatattact gataaagcaa ggctcttatt
     4861 acgtcaaggt attttgacag aaaatctagg cttggaagca ctaaaagctt acatgaaatc
     4921 agttttacca atagcacaca gcttgaaaaa cttggaatat ttaacggttg aagatacgaa
     4981 aaaactaacc aaattattaa cgcaagaaga acctaaaatt atggaagata cagatttaac
     5041 aagtaaagca ttagacttct tacaaaaagc tgcacagcaa taagaataaa atgctatttg
     5101 gaggaaagtg atcctaatag cattttattt ttgcaagtgg ggcggaaaga atagtaaaat
     5161 gagacaatga aattagaaat gaggatgtaa aattgattcg acatgcgaaa aaatcagatg
     5221 caccaaaaat agcaccactt ttactagtaa tatggaaaga tatggaatta cctattttag
     5281 aagtagagac ggaagaagcg attacaaatg cgctaattga agcgattcag acagaagatt
     5341 atcgttatag ttatagacat ctgcatgtct atgagaagga cggggatatt gcgggagttt
     5401 tggcaggcta tcctgggaaa atcgaacctg aaatcgaccg cgcttggaac gagattgcaa
     5461 agaaacacgg cattagatac gaagaaccaa tatttgccga taaagaaaca tttcctggtg
     5521 aatggtactt agattcgatc gttacaaacg aaaaatatcg cggtcatggt gttggaacag
     5581 cacttcttgc aaaattaaca gaaattgctg cagaagatgg tgaaaaagta gtaggactaa
     5641 attgtgacaa aggaaatccg catgccaaga ggctttatga acgtctagga tttcatgtga
     5701 ctggagaaat catacttagc ggtcatgaat atgaacatat gcaaaaataa gaaatgaggc
     5761 caaccaatga aaaaaattat tttcgcagtg gtactaagtt tagttctaat tcttgctgga
     5821 tgtgccgatg taaccaatac agtaaaagtg gataaaaaag gggaagcgac catttccttt
     5881 gatatcgata tttcttctgt agcagggatt tttgcctcaa gttactcgga tgaagtagaa
     5941 gctaaactga aagaagctgg atttacagta gataaaaaat caaatacaag ctatcatatc
     6001 gaaaagaaac tagataaaaa tgaaacaacg aaaagcgata tgaaaccgga agattttggg
     6061 gtaaaaatta ccaatagcaa aagtttcttc acacaaaaaa tcaaagtaga tgccgatatt
     6121 gacatcgaaa agatatggaa aaaagaagtg gcggatgttc cgtttccaaa agaaatttta
     6181 agccaagttg attatacatt tattttggat ttaccgattt cgtcaattgg agagaacaat
     6241 gctaaaagtg tggatggcgg gaagctcact tgggatgtgc cgctcgacaa aaaatccgaa
     6301 atgtattttg aagtcactgt accaaacgta aaaaacattg cgattgttgg tgggattcta
     6361 cttgtcgcaa tcattggtct acttatttat cttattaaaa gacatcggaa aaagaaaaaa
     6421 caactataaa aaagtgtgga tcagttagct aaactggtcc acacttttat ttactgcttg
     6481 ttctaactct tcgtaacaag ctaatttttt ctcgattttt ttaaatgctc ggtctagctc
     6541 tgcttgccgg cggtacatat cttgttgatg ttctttcagt acagcgatgc gttcggagac
     6601 agtaccgtca ccgcctttag ttagttcaac aatttctttt tgtttcgcaa ggggcattcc
     6661 ggtgacgcgt aaacaggtga gtaattcaag ccagtgaagg gcatcattat caaaaattcg
     6721 gttattattt ttatcgcgtg ctagaaaagg gattaatcct tctcgttcat aatagcgaat
     6781 cgtatgggcg cttaaacccg tgtgttcaga agcttctttg attgtttgtt gcactaaaac
     6841 cacctctttt tttcttaata atagcacctt gaaaatcgaa aagccaaatg tttgcctttg
     6901 agtatactct aaggtgtata gtaaacgtgt tattactttt aggaggcgga taaattgaac
     6961 ttaaaagata cagtaaaact agcaaatggt gtagaaatgc cccgtttagg atttggcgta
     7021 tggaaagtgc aggacggcga tgaagcagta aattctgtta aatgggcgat tgaagctggt
     7081 tacattagta ttgatacagc tgctgcttac aaaaatgaag aaggcgttgg tcaagcgatt
     7141 aaagagtctg gcgttaagag agaagactta ttcgtaacaa cgaaactttg gaatgcggag
     7201 caaggttatg aatccacttt ggctgcattt gatgaaagct tacgtaaatt agaacttgat
     7261 tatgtagact tatatttaat tcactggcca gtcaaaggta aattcaaaga cacttggcgc
     7321 gcttttgaaa aattatataa agataaacgc gttcgcgcaa tcggcgtatg taacttccac
     7381 gaacatcacc taaaagaatt aatggaagac gcggaaattg cgccaatggt aaaccaaatt
     7441 gaattacacc cacaactaac acaagaacca ttacgtaaat tctgtgctga aaacaacatt
     7501 gtagtagaag cttggtctcc actaggtaat gggaaattac tttctaaccc agaaatcaaa
     7561 gcgattgccg atgcacatgg taaatcagtt gcacaagtta tcttacgttg ggatttacaa
     7621 atcggtgtcg tgactattcc aaaatccgtt caccaagaac gtattatcca aaatgctgat
     7681 attttcgact tcgaattaag cgaagaagaa gtagcaaaaa tcagcggttt aaataaagac
     7741 gaaagaactg gcccagatcc agacaacttt aatttctaat agtgaaaaaa tcccttccag
     7801 cttatcgaac tggaggggat ttttatgcta caataaacta aaaaaagagg ttaacagatg
     7861 gacgcaaaaa caataataga aaaccgcttt caaagtcaga aattaataca aactgcgtgg
     7921 agtgactctc cggaaagaat tgtttttcat tttggagcaa tgcaatcgca aaactatggt
     7981 cagtcgctct gggctgttgg gagtagaatg acgacgccaa gtgaaaaggc tgtagagcaa
     8041 gcgattaata atggtgaaat tatccggaca tggcttttgc gcggaacaat tcacttgttt
     8101 tcagccaaag attatcactg gatgatggat ttaattgcgc cttccataga taaaatatgt
     8161 aagccatacc gagcgaaatt aggcttaaca gatgaggttc ttcataaggc tacagaagtc
     8221 gtttcggaaa ttgtttcaga acaagccgtt acgagaaaag acttggcggc tcatttagcg
     8281 accaaagatt taccgagtgc agggattcct tttgctcagc tgttagttta tttaagctcg
     8341 cggaaagtca tttgttcagg cccgaatgaa acttttagaa atacgatgca tattccggct
     8401 gatacgaatc atttcactcg agaagaagca ataaaagaat tagccaaacg atacatccaa
     8461 agccatgcac cagctacttt gaaagatttt tgtttttggt cgggattaac tgtgaccgat
     8521 gccaaaatag gaatagcgga tatgcctaaa atgggcgatt attacataac aacattggtt
     8581 gaaaatggca caatgccaac tacaattcca ctcgctggtt tcgatgaatg gattatcggc
     8641 taccgagatc gctccgtcgt tttaccggaa atatggcacg atgaaattat gacgaaaaat
     8701 gggattttca gaccggcgat tatcacggag ggcaaagtag tcgggaaatg ggaaaaacca
     8761 aagaaacgtg ctgaattaga cggagatttc tgggaccgtt acatccagtt tcgaaatatg
     8821 ctatagtcaa gtagatggat aaattttaat ttgaggtgat aaagctatga atgcttttga
     8881 taaattttac aaaaaaacag tagaagaacg acgtgcaatt ttggcggaat atgccgactt
     8941 aaatgaagaa gagcaggcat ttttagcttc tacaggggcg ctttcttttg ataaagcgaa
     9001 tcatatgatt gaaaacacga ttggcattta ttcgctgccg ctcggattag gaatgaacat
     9061 gcttttaaat gataaacatt atgtggtacc gatggtgatg gaagagcctt ctgttgtggc
     9121 ggcccaaagc gctggggcga aacttattgg acaaaatggc gggataactg gaagtgcaac
     9181 aaaacgaaaa atgattggtc agattgagtt gatttctgtt tctgatatcc aagcagcaaa
     9241 agaaaacatc attgcgaacg aagaacaact aattgctatc gctaaccaag ctcatccatc
     9301 gttacaaaag cgtggcggtg gtgcggttga aattcaagtt agaacagcac aaacagcgaa
     9361 tgacgaaacg ttacttatcg ttcatttact cgtagacacc caagaagcaa tgggcgcgaa
     9421 tatggtcaat acgatggtcg aaaccttagc gccagaatta gaaatgttga cgaacggaac
     9481 agccaatatg cgcattttat ctaatttagt agatgaagcg accgcaacgg ctgtttgccg
     9541 gattaatcca gaaagcttag cgaccaaaac ccagagtggt gaatgggttc gtgatcgaat
     9601 cattgctgca tatgaatttg ctgatgcaga catttaccga gcagcaaccc ataataaagg
     9661 aataatgaat ggtattgatg cggtaattat ggcgtttggg aacgattggc gcgcggtaga
     9721 agcggcaagt cacgcctacg cagctagaac aggaagctat aaaccgatgt ctaaatggtc
     9781 aaaagatgcg gaggggtatt tggttgggga attaacgtta ccgatgccag tagcctttgt
     9841 aggaggttct atcggcatcc atccaatcgc aacactttcg aaaaaaattg ctcgagtaga
     9901 atcagcgaag gaattagcga tgttagtttg tgccgttgga ttaacgcaaa atctcgctgc
     9961 tttaaaagca ctcgtaacag aaggaattca acgcggacat atgtcgctac aagcgaaatc
    10021 actagccatg acagccggtg cagaagcaga tgaaatcgaa aaagtagcca catttttaca
    10081 agaaagcaaa caattaaatg tagttgctgc aaaagaattt attaacaaat tacgcagtgg
    10141 aaaataaaat aaattattaa gcctaccttt acaaaaactt aacaatacat tcggaacgtg
    10201 ataaagcctt tagtatcaac aactttcaga gatttacttg gacttcactt tacaaaataa
    10261 aaaaaaggta tttacgttac ttttactttc ttttatgatg aaaaaagagt gaaattacaa
    10321 gattacaaac aaaaaggaga tattcatggg agacataaat attcagcaga tgatttttca
    10381 atttatcgga ggacttggaa tttttctttt cggtataaaa tacatgggag acggactgca
    10441 aatggcagcc ggcgacagac ttcgtgatat tttagataag tacacaacga atccttttat
    10501 gggagtactt gccgggattt tagtaaccgt attaattcaa agtagctcag gtacaactgt
    10561 tttgacggtc ggattagtaa gtgctggatt tatgacgtta aaacaagcaa ttggtgttat
    10621 catgggagca aacatcggta caaccgttac cgcctttatt attggtatta agctatccga
    10681 atacgcttta ccaataattg ctgctggtgc agtactttta ttcttcttta aaaatcataa
    10741 agtcaaaaat attggccaag tattctttgg atttggtgcc ttattttatg gactagattt
    10801 gatggggcaa gggatgaaac ctcttgctgg aatggaatct ttccatgaat taactgctca
    10861 aatgagtaca aatccattct taggtttgtt aatcggaacg atcttcacgg cagttgtaca
    10921 atcatctagt gcgaccatcg ggattttaca agaattatac ggacaaggtg cgattgatct
    10981 tcaagcggct ttgccagtcc tattcgggga taacattgga acgacgatta cagctgttct
    11041 tgcagcaatt ggtgcgagtg ttgcagcgaa acgtgcagca gctacacatg ttatctttaa
    11101 tttaatcggt gcaatcattt ttatgctgat actaccgcta ttcacttctc tggttaccta
    11161 cctacaagga ctgtttggac taaacccaga aatgacgatt gcggttgcgc acgggacgtt
    11221 taatattacg aataccttta ttcaattctg gtttatcggc gcatttgcat ggcttgttac
    11281 gaagcttatt cctggcgacg actcgcgaat tgactataaa accaaacatt tggatacgaa
    11341 tttaattgac caatctcctg gtatcgctct tgaaatggca cgggaggaaa cgcttcgtat
    11401 ggcagattac gcgaaattcg ggttgcaaga agcgagacaa taccttgtga accgggaatc
    11461 gaagcatgcg gagtcaacta ttcaagtgga agaagccgta aataatttag accgaaaaat
    11521 caccgagtac ttaacgaaaa tttcttctgt cgccctaacg aacaacgaga cagaagaaca
    11581 tgcgctaatg cttgataccg ttcgtgatat tgaacgcgtc ggtgatcaca tggaaaacat
    11641 cgtagaaaac atcgatcaac tgattaagaa taaagcaaaa atgtctgaag aagcttctga
    11701 tcaactcatc gaaatgtttg agctaacaac cgcgaatttc gaacgtgcag tgaaatccat
    11761 gcataaaaaa gatcgcgcac tcgcagaaga aactatttta gtagaaaaag atattgataa
    11821 agcagagcgc agattacgta aaaaccatat tcgccgctta aacgaaggca aatgccaagt
    11881 cgttagcgga attctataca ttgatatcgt cagtgattta gaacgaattg gtgaccacgc
    11941 gaacaacatt gctgaatctg ttttggaatt aaacgaataa ttctaaaggg aactagacta
    12001 tttgacgtct ggtttctttt ttttgttaaa aatctacact tttactagtc cttgtgaagc
    12061 attgagtata agcggatagt ggtgtaaaat aagaatgatt ataaaactag aatgactgga
    12121 agtgttgagt cttatgcgaa atagaaaaac aatggatgga aacacggcag cagcttatat
    12181 ttcttatgct tttactgaag ttgcagcaat ctatccgatt accccttcct ccaccatggc
    12241 tgaacttgtg gacgaatggt catcaaagaa caagaaaaat ttattcaatg aacctgtaaa
    12301 agtagtagaa atgcaatcag aagcaggagc agcaggaaca gttcacggat cacttcaagc
    12361 tggtgcgcta actagcacat acacggcgag ccaaggttta cttttaatga ttcctaatat
    12421 gtacaaaatt gccggtgaac tattgccaac tgttttccat gtttccgcaa gaacaatttc
    12481 agcagcctcg ctaaatattt ttggcgacca tagtgatgtg atggcagcac gtcaaacagg
    12541 atttgcgatg cttgcagaag gttccgttca agaagtaatg gacttatccg cggttgctca
    12601 tctggcttca ctaaaaggaa gtttgccatt tttaaatttc tttgacggct tccgcacaag
    12661 tcatgaatta caaaaagtcg aagtactcga atatgacgaa ttagaaaatt tgctcgacaa
    12721 agaggcatta caacaattta gaaatcgcgc aatgacacca aataatccta aaactttagg
    12781 ttcgaatcaa aatccagata tctttttcca acaaagagaa acggtgaacc gctattacga
    12841 ggaaatccct aacatggttc aaaattatat gaaagaaatc aatcagcttc gtggcacgga
    12901 ttatgactta gttaattatt atggagcaga agacgcaaca gatgtcattg tggcgatggg
    12961 ctcagtaacg ccagtcattg agcaagttat tgattactta acaacggaag gcaagaaagt
    13021 gggattactc aatattcgct tatatcgtcc attcccagca gaaaactttt tagcaaaact
    13081 accgaaaaca gtagaacgtg tggctgtttt agaccggacg aaagaacccg gatcaggcgg
    13141 agaaccactt ttactcgacg tgcaaagtgt gctttatgat agtgaaactc gtccactagt
    13201 tattggcggt agatatggct taggttcaaa agatgttaca ccagaccaga ttctcggtgt
    13261 ttattcgcac ctaacgacag aaaaaccaaa accgcgcttt acaattggaa ttacagatga
    13321 tattacgaat ctatctatcg aaaatgctgg accaagtgat ctcacttcag aaaaaacttt
    13381 ccaatgcaaa ttctggggtt ttggctcgga tggtactgtt ggcgcgaata aagccgcaat
    13441 taaaattatt ggtgataaca ccgatttata cgcccaaggt tacttttcct atgattcgaa
    13501 aaaatcgggc gggctaactg tttcgcattt gcgctttggt gaaaaacgaa ttcgctcagc
    13561 ctatctaatc caacaagcgg attttgtctc atgctctacc tcggcctatt tacgttccta
    13621 tgatttatta aaaggtttaa aaccaggcgg aacattcttg ctcaatacca tttgggaagg
    13681 cgaacagtta gaacgccatt tgccagccgc aatgcgcgaa tatattgcga aaaataatat
    13741 tcaattttat acattaaatg caatgagaat tgcaggagaa gcgggacttg gtagaagaat
    13801 taataccgtt atgcaaacgg cctttttccg agtgaccgac attttaccgt ttgaaaaagc
    13861 acttgctgat ttaaaagaat cggctatcgc tacttatggg aaaaaagata tggcggttgc
    13921 ggagaaaaat attctcgcga tggaccaaac tgttgctaat ttgcataaag tagaagttcc
    13981 tgcaagctgg gcaaatccag ttgtaacagc agaaacaaat gcaacgactg aaaaaccagc
    14041 ttacgtacaa aatatccttg agccagtgaa tcgcttagaa ggcgacaact tgactgttgg
    14101 tgatttaatt tcgaatggta tggtcagtgg ggcttatcct ccggggactg cagcttacga
    14161 aaaacgcgga attgcactcg aagttcctga atggatttct gaaaactgta cgatgtgtaa
    14221 tgaatgcgcc tttgtttgtc cgcatgctgc cattcgtcca attttaacag atgaagaaga
    14281 aatggaatct gctccagaag gctttatgac aagagaaatg cgcggcaaag atggccttcg
    14341 ttaccgtatc caagtttccc caatggactg cactggttgt aacttatgtg cggaaacgtg
    14401 tccggcgaaa gataaagcgc ttgtaatgaa accatttgaa gaagtcacag ctaaagaaaa
    14461 tccgaattgg tcatttgcga ttaatgtgaa accgaagaaa aaccctggga agaaaaatac
    14521 tgtacctgga agccaatttg aacaaccgtt attggagttc tctggtgctt gtgcaggttg
    14581 cggtgaaact ccttatgtta aattattaac gcaaatgttt ggcgaccgga tgatgattgc
    14641 taatgcaact ggttgttcct ctatttgggg cgcatctgca cctgcaacgc cttatactgt
    14701 caatgataaa ggacatggac cggcgtgggg caattccctt ttagaagata acgcagaata
    14761 tggttatggt atgtatttag caaaccaaac catgcgaaaa gctttaaata ataaagtgac
    14821 aaaagcactc agagaagaag ccatgtcaga aacgttacgc gaggcgctta ttgactggca
    14881 aacacaaatg gacgtttcag aagatacacg cgaacgggca gaagcattac aacttgcgct
    14941 tcttagtgag atggaaggca atgaggcact cgaatccatc tataatgacc gagaattatt
    15001 tattaaacga tcgcagtgga tgcttggagg cgacggctgg gcttatgata ttggcttcgg
    15061 cggaattgat catgtgttag catcaggcga agatgtaaat attttcgtaa tggataatga
    15121 agtatattca aatactggtg gacaatcatc gaaagccaca ccaaccgcag caattgccaa
    15181 atttgcttca ggcgggaaat ctgtcggcaa aaaagacctt ggtattatgg cgatgagtta
    15241 cggaaatatc tatgtggcgc aaattgcgat gggggcgaat aaacgtcaaa ccttaaaagc
    15301 tattgaagaa gcagaggcat atccggggcc atctctaatt attgcttata cgccgtgtat
    15361 taatcacggt atttcaagcg gtatgaaaac gatgctaagt gaaacgcaaa aagcagtaga
    15421 atgtggctac tggagcttgt accgttataa tccggcacta gaagaaaaag gaaaaaatcc
    15481 aatgacaatg gattataaaa aagtcgattt cgatcaattc gaagacttcc taaaacgcga
    15541 aacacgatac tcagcgcttt acaaagcaaa tccagatgtt gcaacaaaac tatccgaaaa
    15601 aacccgttta gatgcagaaa aacgctttaa acgctatgcg acgatggctg ggcttgattt
    15661 agagaaaata tggaagaaaa aagaagcaac tgaagatgtg aaagcgcccg ttgatgatga
    15721 gcgagcagca aggaaagcag cacgtgaagc aagaagatta gcgcgggagc aaggtaaata
    15781 aaaaaagtag gcctagctga tgctaggcct acttttttgc ttttgatctg tgggaatcag
    15841 aagcgatgtg ggaatgaata gatattctct tatgagagtt ataaagaaat aactactatt
    15901 taaatataac tttttttctc agaagatgca ctagaaaaat gaagagataa gttttcatat
    15961 aagtgttagt tgttgcagcc caagcttttt gggacttgtg aaagttttat gacaattaaa
    16021 aacctattag ttaacggttt tcatgaagca agccattacg ataggcatct agtaacaatt
    16081 ttaaatcttc tgcctgctca ctaagtttag ccccaatatc ggtatccctt acacgtttac
    16141 ggttaatttc catttcaata acttgacgcg tggaaagaat atccgtttca tttttgatag
    16201 catcctcttt tgtagtaaat ggctgatgac tcactaattg taaaccgtaa ctattaaaaa
    16261 gtagtgtata acccgctaag ttcgtttctt tatgataggc ctttgcgaac ccgccatcga
    16321 tgacgagcat tttaccattc gctttaatcg gactttcacc ttttccttct ttgactggcg
    16381 tatggccgtt aatgatatgc ccacattcac catcaagccc aaattcttct aaaatttgtt
    16441 tgcaaattaa ttcgttatta cgcaatttgt agtaaggatt tttttcttct gtgtgtgttt
    16501 ctttttctgc aacaaaataa cgttcaaatg tagtcatttc actttttcca aatagcgaag
    16561 aaatggcacc agtccacaaa taccaaacga tatcacatgc atatttcttt tctttagttc
    16621 cagttggacg tacgtatgct tcgcgggtaa gtatttcaaa ctgctctaaa agcgaacgac
    16681 cagcatattt ttcgccacgt aatttcattt ccataaaagt cccatcttcg tggagtggaa
    16741 tgcagccatg gtagagtaaa ttaccattat aagttaaaaa catgctgcct tttgaatata
    16801 gaaattgtac atgtttttgc aatcgacgac agtttttaaa agcggcagta attttcccaa
    16861 taagttctct ctccgcgtca gtgagttcat aaggtttttc tggattaatc gttggaaaat
    16921 gactgtctaa caacaggtat tcttttccct ttagatgaat tgtgcctttt ttataatcga
    16981 taaattgaag taaaagtcgg tgatccatat caaattcttt gcgtcgattt ataatttcac
    17041 cttccaattt aaactgaata atcgagatag ccttatgcat cctagcaatt tgcgtgattt
    17101 ctgcattact atagttaata ttttcttcgt ttttgggctg gaagtaggta caaggatcgt
    17161 ctttgtacac ttcgtcggca aaaagggcca gggggcgaag agaaataccg taactatctt
    17221 ctaaaatatc taaatttaaa taacgggcag aaatccgaat aacattagcc gcacaaaccc
    17281 tagaaccact agccgcgccc atccataaaa tatcgtgatt accccactgg aaatcgagcg
    17341 aatggtaatt cattaatgta tccatgattt tatctggata aggaccacga tcatagacat
    17401 caccaacaat gtgcaaatga tcgacgacca attgttgaat aagtaacgag agagcactaa
    17461 taaattcttc tgcacgacca agtgaaataa tatgttgtaa aatttcttca taataaagct
    17521 ttttgtcgtc ttcattgtag ttttcatgaa gtaactcttc taatatgtag gcaaaatctt
    17581 cgggcatggc ttttctcact ttagaacgtg tgtattttga agcaacgtac tggcagagtt
    17641 caatcaaacg aaaaagtgtg gtgcgatacc aagcctgcaa atcttctgtt tcactagcaa
    17701 gcaaatccat cttttcttct ggataataaa tcagtgtact aagtgaatta atctctgcat
    17761 catctagctc cgcgccaaaa atatcacgaa ttttccgttt tacaacacca gaaccattac
    17821 gaagcacttg ttcaaaagca ctatattcac cgtgaacatc acttaaaaaa tgttccgttc
    17881 cttttggaag gttcataatt gcttcgagat taatgatttc cgtagctgtc ttggcaatag
    17941 taggatattc ttttgctaac aagcgtaaat atttcatatc aatagttttc accagtccag
    18001 tacctccttt ttcaattggt atagctatta tatttcttaa atgtaagcaa ggcaaacgtt
    18061 ttgttttata attggtctat acaaaaaaga cgagctagag cccgccttag aaaactggat
    18121 gaagaaaata gagcacaatg ggtaaggtaa taatacttaa aactgtacta ataaatgtgg
    18181 cactagaaac taaatctggt tttgtatcaa attgtacagc cattaaagta gtattcgctg
    18241 cagttggcat agctgcaagt aaaatcataa tttgttttgt catttcgtca acagggagaa
    18301 tcaacgttaa accaaacgca atgattggag caatgagtaa tttgagtact aatgcaatgc
    18361 ctacttttgt aagttcgatt cgtctaaacg aaataactgc caactgcatt ccaaggacaa
    18421 tcataattgt tggaatagca gcgtcgccaa caagttttac gcaagtcatt aaagcggatg
    18481 gaagtgaaac atgaagtaat tgaagcgtaa gcccgagtaa agccccgtaa gcaatcggca
    18541 tccgaacaac ccgtttcatg accgttttca ttccatttgc atctttactt ccttttgcgg
    18601 caaaataaat cccaatggta ctcatagcta gttgctgcaa caccattaat acaacagcaa
    18661 tatcaagccc aacagcccca aaaacaagca agacaacagg tgttccataa tttccattat
    18721 tcataaaagc actagccaaa atgagcgcgc aacgatcttg caagttataa ccaagcaaaa
    18781 aactaattaa actgacaagc aaaatcaaac tcagacaaag cgcaaaaatg taaatcgcca
    18841 aatatgcata atctatcgtt agcgcattgg tataaaaagt attaaatgca agaaacggtg
    18901 acattaagta aagcgtgagt ttagataagt taggaatatc aaattttaaa gtcttttgtc
    18961 caataaaccc aatagcgaag atcccaaaaa ctggaagtaa aataagtaga aattccatgg
    19021 cgcccctctt ttctatgtat attgtagctt attgtaccat aaaatgaagt ttcagttaga
    19081 cacttttaca tgttaccagt ttagtattta tcttaatcta acagttattt tagaaaatta
    19141 aatttcaagc tggagcgcca ttataaaatg tataatgaaa acgataaaat tagtta
//
LOCUS       DASDYK010000044        18989 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.044, whole genome shotgun sequence.
ACCESSION   DASDYK010000044 DASDYK010000000
VERSION     DASDYK010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 18989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18989
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.044"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(68..616)
                     /locus_tag="U0308_001544"
     CDS             complement(68..616)
                     /locus_tag="U0308_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008475631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HEM2316511.1"
                     /translation="MRDQKLKFLVVDALFAVIIALLAQVAIPLGPIPLTGQTFAIGLA
                     ATILGARHGTISVLVYIVLGAVGIPVFQGMTAGIGILFGPTGGFIVGFIFNALLTGWL
                     LEKTKFTVPYAIVANILGAIVTLIFGVLWLKVSTGLDWPTAFLTGMVPFIIPGIIKAV
                     FAALLGILIRDRLIKAKLLRAS"
     gene            810..1142
                     /locus_tag="U0308_001545"
     CDS             810..1142
                     /locus_tag="U0308_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEM2316512.1"
                     /translation="MEVNPQFKKGVLELCCLFLIQKKDCYGYELANQVSKYIEVAEGA
                     IYPVLRRLVKEEYCSTYLVESNEGPSRKYYQLTVKGEIYLNELISEWNNFTDSVAKLL
                     TEGDAVNE"
     gene            1135..1725
                     /locus_tag="U0308_001546"
     CDS             1135..1725
                     /locus_tag="U0308_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HEM2316513.1"
                     /translation="MNKQDFLNELNQRLELLDPKERRELLSDYQEHFRNGIEAGKSEE
                     QIVFDLGKPEEIAADIISERGIREEPAEMDYYYVPRKNQNENRSVSKQILIGVGLFFL
                     DICLIIPIMVSLWSLVISLWATVGGFLLSPVILGVGIIFGADFEFYQMFVSIGLVGLG
                     LMLLFVANALTQLTSKVTMAIIQWHKYAVKGGGKNA"
     gene            1718..2818
                     /locus_tag="U0308_001547"
     CDS             1718..2818
                     /locus_tag="U0308_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 domain-containing protein"
                     /protein_id="HEM2316514.1"
                     /translation="MRKHHLSKKLFFAGLVLFIIGAIGVALTMNKGNMIEKGEPLTKQ
                     WDLSAENINSIAFSSERDVTFEWKESTNGKNYIELKGNYSANDKKAIQKLDPVSEDGT
                     SFNITVPEEEDWYNGFGKIYAYGQQKVTVYLTKDTKLADLEVKSHSGDINVADFKVKK
                     FVSSTNSGELKVSNLEANTAQMATSSGDLELSNMKANSSVETGSGQTDLTNLTGDLEV
                     NGGSGDVNVTGVKAKKLKIAIDSGDIELTSGTVTDLAVLTTSSGDIDASTKGKVQAES
                     NSGAIELAGITNDVTAKTSSGDIDVAFIKQVKNIEINTDSGEVELDLPGDFKAIYEAS
                     SNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK"
     gene            2924..3424
                     /locus_tag="U0308_001548"
     CDS             2924..3424
                     /locus_tag="U0308_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2316515.1"
                     /translation="MNFHIRKATNSDAEAIQHVAITSWHHTYQDLIPGDVQDDFLERF
                     YNVETLHNRISATPFAVVEQADKVIGFANFIELEKGKSELAAFYLLPEVTQRGLGTEL
                     LEVGMTLFHVPLPMFVNVEKGNETAIHFYKAKGFVQVEEFTEDFYGYPLETIRFNLNH
                     HAFEEE"
     gene            complement(3472..3858)
                     /locus_tag="U0308_001549"
     CDS             complement(3472..3858)
                     /locus_tag="U0308_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316516.1"
                     /translation="MRFIIAYLSIFVLGIFSTLLVETILYDNVTPQLVFSAILFAAPV
                     ILVASTLGEIFYGFSKKASYFTFAIWGFAYGVVAAVIILSIIQVSGMLISVGVSILAG
                     VIMALLAIIFFFLRGGKSTSGKAATK"
     gene            complement(3911..4255)
                     /locus_tag="U0308_001550"
     CDS             complement(3911..4255)
                     /locus_tag="U0308_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HEM2316517.1"
                     /translation="MLDKKIISALSYFSLFFAPVITPAIIWCTTKDKEIRHHVRWALL
                     TQTTFVAGVVVMILLYNNVPFSTNSADTINFLALATVFFIVFLNVSILIFNLIRGITR
                     IVKHSDDNWARC"
     gene            complement(4404..5744)
                     /locus_tag="U0308_001551"
     CDS             complement(4404..5744)
                     /locus_tag="U0308_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM2316518.1"
                     /translation="MSSVHKVASISLFTLAWPIFLEQFLRLMISYIDVFMLGHYSDDA
                     VAATGVANQILVISIIIYGFISVGVQIIVAQMIGAKKHKEIENVITNGLVVAFLIGIV
                     MSIIFIFMSKNFLTWMGIDPHLVQVGAPFLEIIGGSSVVIAIHASILPILRAHGYVRQ
                     SILVPVTISIINVVGNYLFLYGPLAYLDYGVAGVGISTAVANFVGMGLAIWMLRKYIG
                     YTFHFKKLEQVSKKLLYSILRLGLPSAGENLSYAGSQLVVTAIIAILGTEALTTKVYA
                     STVSQFVALFAIALGQASQIIIGRAVGAKEIDKAYKQGLRSWKIGLVVAIVVSVSIYL
                     FAEPIMSLFTTNTEIIAMTKELFLLSIFLELGRATNIIIISSLNSTGDVRFPFICGLI
                     VMWIVSLPFSYVLGISAGLGLVGVWLAYIIDEGVRAVLMYRRWRSKVWSLKSVI"
     gene            5910..6371
                     /locus_tag="U0308_001552"
     CDS             5910..6371
                     /locus_tag="U0308_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2316519.1"
                     /translation="MSSKNQDLGHSVIKAFMNFKHAEIKSFQIPGYSKSETRFIFILS
                     RGLKSRGPKIRVSDLGHMLRISKPSVTQMIQSLEGKGLIKRVQNPEDKRSMYVELTEV
                     GAGVSEKMLDEFQASFEDMQEFLGEDDMKKLITLLEKLTDYLNTKSENKEA"
     gene            6379..8103
                     /locus_tag="U0308_001553"
     CDS             6379..8103
                     /locus_tag="U0308_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003735787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316520.1"
                     /translation="MMKLMKRLKPYWLSITAVLVLTFGQVIGQLYLPTLMSNIIDKGV
                     VTGDTDYIWSTGMQMLLISFASVILSVIVVYLASRISMGFGKDLRDKIFTKVEDFSLQ
                     EFDKVGTSSLITRTTNDVVQIQNVLYMMMRLMVMAPIMLLGGIIMAVGRDAKLSLIFV
                     VVLPLLLLLVVILGGKAMPMFKSLQKKMDKLNRVIREGLTGIRVVRSFNRNEDELEKF
                     EEANADYATTAIKVNRLLSLMSPLMMLLMNLTSIAIVWIGSIFIGNGDMQVGDLMAFI
                     QYAMQIMMSFMMLSAVFIMIPRAGASAERINEVLDMNAEILNPENPKTSAPPAKLSFE
                     HVTFRYEGAEKPVIEDITFEANAGETVAIIGSTGAGKSTLINMIPRFYDVESGVVKIN
                     GIDVREMDQSSLRQKIGLVPQKAVLFTGTIASNMRYGKEDATDEEIWAALRTAQAENF
                     VSKLANGLGSRVEQGGNNFSGGQKQRLSIARSLIRKPEIYIFDDSFSALDFKTDAKLR
                     EALKAETTEAVTLIVAQRITSVVNSDQIIVMNEGKIAGIGTHEELKETNQIYQEIMRS
                     QLSEEEIA"
     gene            8100..9917
                     /locus_tag="U0308_001554"
     CDS             8100..9917
                     /locus_tag="U0308_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316521.1"
                     /translation="MSGPGPGGGMRMQTTAKPKNFKQTLFRLLGYMKPRSVAIIVVFI
                     FAILSTIFNIFSPKELGKATTEIFKGVMSPAGIDNDKIFNILMIVLVLYLGSSLFSFI
                     QQYVMSSVAQRTVYDMRKDLKAKMARLPLKYYDTRSNGDILSRSVNDMDNIANTLQQS
                     LTQAITAIVQMIGVLIMMLTISWQMTLIVLVTVPISIILVAIIAGRSQRYFGAQQRNL
                     GILNDTVEETYGGQTIIKAFGQEKKTLVKFDEVNEDYFKAAKKAQFISGIMMPVMQFV
                     GNLGYVGVCVAGGIFVTNGTLQVGDIQSFTQYVQLFTQPISSVANIANIIQSTIASAE
                     RVFEMMDEEEEKDEIPANVNQVAGEEHSIVFDHVKFGYTPDKPLMTDLNIHVEEGQMV
                     AIVGPTGAGKTTIINLLMRFYDVDGGQIRMKGIDTRDMTKDAVREKFGMVLQDTWLFN
                     GTIADNIAYGREGATKEEVIGAAKAAYADDFIRRLPNGYDTVLNEEGSNISQGQKQLL
                     TIARAILSDPSILILDEATSSVDTRTELNIQLAMGNLMEGRTSFVIAHRLSTIRDADL
                     ILVMNHGSVIEQGTHQELLDAKGFYADLYNSQFTGAQAV"
     gene            10034..10333
                     /locus_tag="U0308_001555"
     CDS             10034..10333
                     /locus_tag="U0308_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEM2316522.1"
                     /translation="MYQSITANDLEQDLKKASHNILDVRDADAFVEGHIPDAINIPIN
                     ELPEKLASLDKEKPYTIICYAGGRSERASQFLAAEGFDVTNVMGGMGAFHGIVTK"
     gene            complement(10376..12145)
                     /locus_tag="U0308_001556"
     CDS             complement(10376..12145)
                     /locus_tag="U0308_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapB repeat-containing protein"
                     /protein_id="HEM2316523.1"
                     /translation="MRKMGVKIGLCVLLMMPFTISFSANVSAEEEISVKAAQDVVNIP
                     DPVLKSYLNGLLGQSSTSDITEAQMDTITNVTISNSSLTDLTGLDYAHNLTILHLSNT
                     GVTDYALVAKIPSLTNLSIAGDNLTNDSLPDLNNLSNITNLNLSPGKLDNNALTKFNK
                     MSKLSYLNLDSNPSITNIMPLKSIPNLATLFVQFCGINDFRGIDTFPKLVSLSAYGQN
                     VGRTVLINSSIKSSALNFDEANQTIFVPFTLMTERGVNFDGYLFPFTTNTSSASTYFT
                     LNETKIDGSRLTIDDKGITVSGITKSYFDTITKMEYNALYNNPAGSYQTPPNFNNYSV
                     SGGSYDHYFDIDHTLTITNDSAISYGEQTTVTEEQFLKDVHAETDDGTPVTSDFNTVV
                     DFSKPGVYTVTLNAENAAGLKATPTQVTVTILAKPVITADKSISYTKDSTKTDQQFLQ
                     DISAKTSDGSKVTSDFDSVVDLAKVGTYKVTLNAVSADGLNADPVIVLVNVVEGNEPP
                     TPPAPGPDPTPGPTPNPNNPNINPNPDNGQSANSENASNPSNSEVNAALPNTGDASQA
                     TTVLIGIIIAGVAILFFRQRKHS"
     gene            complement(12306..12932)
                     /locus_tag="U0308_001557"
     CDS             complement(12306..12932)
                     /locus_tag="U0308_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HEM2316524.1"
                     /translation="MTNVLFIKANGLPAERSVSVALYEIFLTEYKKSHPDDNVTELDL
                     FEADLPYYDVTMMSGLHKEAAGETLSPEEKRLADIANSYLDQFLAADKIVMAFPLWNF
                     SIPAQFLTYLFYLNQAGKTFKYTANGPVGLVADKKIALLNARGGIYSDGPMQSFEMSL
                     SYVKNVLAHFGISEPEMVIVEGHNAKPDQAKDIISAGAKEAVELAKIF"
     gene            13101..13550
                     /locus_tag="U0308_001558"
     CDS             13101..13550
                     /locus_tag="U0308_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2316525.1"
                     /translation="MGVKTLKPCTERSELLYRMHLLSKEISHVFEQQTNMSFTKVEIL
                     FHIQQTPGQSQNRLREKLYIDSASITRHLKRMEAQGLIVRKKQDENKRYTYLFLTSAG
                     EAELATLLLEKEKFQNGALEAFSEEEVSALLKSVTKMMNNVEKMEEK"
     gene            13553..14494
                     /locus_tag="U0308_001559"
     CDS             13553..14494
                     /locus_tag="U0308_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEM2316526.1"
                     /translation="MKAVVIENYGGKEELKEKEVAMPKAGKNQVIVKEAATSINPIDW
                     KLREGYLKQMMDWEFPIILGWDVAGVISEVGEGVTDWKVGDEVFARPETTRFGTYAEY
                     TAVDDHLLAPLPEGISFDEAASIPLAGLTAWQALFDHAKLQKGEKVLIHAGAGGVGTL
                     AIQLAKHAGAEVITTASAKNHELLKSLGADQVIDYKEVNFKDVLSDIDVVFDTMGGQI
                     ETDSYDVLKEGTGRLVSIVGISNEERAKEKNVTATGIWLQPNGEQLKELGKLLANKTV
                     KPIVGATFPFSEKGVFDAHALSETHHAVGKIVISFNK"
     gene            14589..15122
                     /locus_tag="U0308_001560"
     CDS             14589..15122
                     /locus_tag="U0308_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2316527.1"
                     /translation="MEIRELKNGQIIMIREATKEDSSNIITYLNEVAGETDYLSFGQG
                     EFAFSIAEEAEYIEENDKNPGSVMLLCFIDDELASISQLMGHMKKRELHTSELAISIR
                     KKYWGLGIGTICMGELIKYAKSSEYLKLIYLEAVSENKRAINLYKKFGFIEAGEIPAL
                     MQVDSRYLDVTMMYLVI"
     gene            complement(15119..15361)
                     /locus_tag="U0308_001561"
     CDS             complement(15119..15361)
                     /locus_tag="U0308_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316528.1"
                     /translation="MHPIEQLLANNNTTTTDVESNTRLKEGSLQKIIDKDIRTSDISL
                     RILSQIAIFLNTGADIIAKQLSDIEVVNDLVFLIED"
     gene            15468..17219
                     /locus_tag="U0308_001562"
     CDS             15468..17219
                     /locus_tag="U0308_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEM2316529.1"
                     /translation="MNDLKDIFKVLYQFKTDYLKVTLLLTILQAFVMGPFIYYFFFFI
                     LRVIGVPGITDANLGEVFSSPVAVIMLLILALLILLFIYYELGFFIMMAIYQLRGESY
                     TVFKIIQRLNVKAKYFLSYQAIYFLLYFFLLLPIAGLSLPITITENLYLPHFITDELM
                     KTTTGTWLYVIAIAIIFYISARLVFALPYFIEDKSLKISGAIRKSWKYPQKNLFFMLL
                     KWVLIIVAIGFLVSIIATIMMLPLLLIEKITPGIAVFIAGITLTILQVIGFFAAGIFQ
                     GIIAQLLVKNAFAIEGQPALVTRNQFPHKKRFIIVAIIVFIIFSSFNIYTVNATLYEP
                     NTKIIAHRGDTMNAVENTVEAIESAAEAGADYSEIDIQETKDHQFVVFHDMTLRRLAG
                     SSKRVADMTLNELQQTKVKSGDYSSHIASFDEIIKTAKRNKIDLLVEVKLHGGESSDM
                     VERLVTLLKKEKVTDKYLVQSLDQPVIEKIEQADPTLETGIILALNIGNLPKTSADFI
                     VLEDFSINKRLLTQARQNNKRVFVWTVNKEKLMQMYLRKNVDGIITNYPKKAIELRES
                     FNENDSLRSRIENRLGF"
     gene            complement(17258..17752)
                     /locus_tag="U0308_001563"
     CDS             complement(17258..17752)
                     /locus_tag="U0308_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5067 domain-containing protein"
                     /protein_id="HEM2316530.1"
                     /translation="MKKLKSVLLLMGIVTFALALTACGGTEDKASTEKTETAKADTKK
                     KANPNELGDYKVEILSSEVVKDFEGNNAIAIKTKFTNNSKENISFMVAIDQQAFQNGT
                     QLETTVSADASMGGSEKDVQPGGTLEVTELYKLQDTQNKVDVEAKELISFSKNAVKKS
                     FELK"
     gene            complement(17832..18974)
                     /locus_tag="U0308_001564"
     CDS             complement(17832..18974)
                     /locus_tag="U0308_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HEM2316531.1"
                     /translation="MGEMTLAFIEEQYKELDNLNNKENPAVLTRNTSTGELFVRKIIP
                     SSFAPVIEQLKDLSSKYLPKIEVMIPNGNQLIVYEEYINGKNLADLMKANATFDADEV
                     TRLMLMLSDALTELHANAIIHRDIKPSNIMISSDGVLKLIDFDASRVFEVGKNQDTVN
                     LGTIGYAAPEQYGYSQTDVRSDIYSIGVLMLELLLGKNTLPDKEHATSLEKIAMQAAA
                     FDPEQRYQSIQDFRTAVKNDSLGPSYVSELSDFTELDNFSTESDWENVSADYEKDFVP
                     WYKHIPGFRTGTPWKMIVGVLGYIFLLFGLFTPPTEGVKMSPIVNFFNNFFLIVPAFV
                     IFTNLCGIWSKLPLLKSSSPGTRKAGIVIYIIVCVSIYGIYNEIFS"
BASE COUNT         6229 a         3238 c         3806 g         5716 t
ORIGIN      
        1 tccccttttc tcagtgttaa tcattatcat tatataggag aagactcaaa atgtgtatta
       61 atgggactta ggatgctcga agtaatttgg ctttaatcaa acgatcacga atgagaatcc
      121 ctaataacgc cgcaaaaacc gctttgataa tgcctggaat aatgaaaggt accatgcctg
      181 ttaaaaaggc ggtcggccag tcaagtccag tgctaacttt aagccataaa accccgaaaa
      241 ttaacgtaac gatggctcct aaaatattag caacgattgc ataaggaaca gtgaattttg
      301 ttttttcgag caaccaacct gtaagtagtg cattaaaaat aaatccgaca ataaatccgc
      361 cagttggccc aaaaagaatc ccaattcctg ctgtcatacc ttggaaaaca ggaataccca
      421 cagcgccaag aacaatgtaa actaaaacag atattgtacc atgacgagct ccaagaatgg
      481 ttgcagctaa cccaatggca aacgtctgcc cagtaagggg gattggacca agtgggatag
      541 caacttgtgc aagtaaagca atgatgactg cgaataaagc atctacgact aaaaatttca
      601 atttctgatc acgcataaac atatctctcc ttaatgtaaa ctttttacta aaataggtta
      661 acatttatct cctgaaaaaa caatactatt ttttctaacc agtaccttgc aatgaacact
      721 agtgtatgtt aaactatagt ggtagtgaac aatatatagt agtgaatact tgttactagt
      781 gtgcaatata acagaatgga ggagttagca tggaggttaa cccacagttc aaaaaaggtg
      841 tgttagaact ttgctgttta tttttaattc aaaagaaaga ttgttacggt tatgaattag
      901 caaatcaagt gtctaaatat attgaagtag ctgaaggtgc tatttatcca gtacttagaa
      961 gattagtaaa agaagaatat tgttctacct atttagtaga atcaaatgaa ggtccatcaa
     1021 gaaaatatta tcagttgaca gtaaaaggag aaatttactt gaatgaactt atttctgaat
     1081 ggaataattt tacagacagt gtggcaaagc tattaacaga gggggatgca gtaaatgaat
     1141 aaacaagatt ttctcaatga attaaaccaa cgactggaat tgcttgatcc gaaagaacgg
     1201 agagagttac tatcggacta tcaggagcat tttagaaatg ggattgaagc agggaaaagc
     1261 gaggagcaaa tcgtttttga ccttggcaag ccagaagaaa ttgccgcgga tataatcagc
     1321 gaacgtggta ttcgtgaaga accggcagaa atggattatt attatgtccc gcgaaaaaat
     1381 caaaatgaaa atagatctgt gagtaaacaa attttaatag gtgtcggatt atttttctta
     1441 gatatttgtc ttatcattcc aattatggtt tcgctatggt ccttggttat ctcactttgg
     1501 gcgacggttg gtgggttcct tttatcacca gttatacttg gcgtaggaat tatttttggt
     1561 gctgatttcg aattttatca aatgtttgtt tctattggcc ttgtaggttt ggggctaatg
     1621 cttttatttg tagcaaacgc gctaactcag cttacaagta aagtaacaat ggcgattatc
     1681 cagtggcata aatatgcggt aaagggaggc ggaaaaaatg cgtaaacatc acttaagtaa
     1741 aaaattattt ttcgctggtt tggtactatt tattatcggt gctatcggtg tagcattaac
     1801 gatgaacaaa ggtaatatga tagaaaaagg tgaaccactt acaaaacagt gggacttatc
     1861 agctgaaaat attaactcca ttgctttttc ttccgagcgc gacgtaacgt ttgaatggaa
     1921 agaaagtaca aatggaaaaa attacatcga actaaaaggt aattactctg ctaatgataa
     1981 aaaagccatt caaaaattag atccagtttc ggaagatgga acgtccttta atattacagt
     2041 tcctgaagaa gaggattggt ataacggctt tggcaaaata tacgcatacg gtcaacaaaa
     2101 agtaaccgtt tatttaacaa aagatactaa attagctgat ctagaagtga aatctcattc
     2161 tggggatatc aatgtagctg attttaaagt aaagaaattt gttagttcta ccaactcagg
     2221 tgagttaaaa gtaagtaatt tggaagcaaa tactgctcaa atggctactt cttctgggga
     2281 cttggaatta tcgaatatga aagcaaatag ctcagttgaa actggttctg gacagacgga
     2341 ccttactaat ttaacaggtg atttagaagt aaatggtggt tcaggcgatg tgaatgttac
     2401 aggtgttaaa gcgaagaaac ttaaaattgc catcgattca ggagacattg agttgactag
     2461 tggcactgta actgacctag ctgtgttaac aacaagttcc ggagacattg atgcaagtac
     2521 aaaaggtaaa gtacaagcgg aatccaactc aggagcaatc gaacttgcag gcataacgaa
     2581 tgatgtaaca gcaaaaacaa gctcaggtga tatcgatgta gcttttatca aacaagtaaa
     2641 aaacatcgaa atcaatacag attctggtga agttgaactt gatctaccgg gtgattttaa
     2701 agctatttat gaagcaagta gtaattcagg tagcgttaaa gcaccaacga gtgattcaaa
     2761 taccgataac cgagtaacgg tgaaaacaag ttccggagat attaaaatcg aaaaataaaa
     2821 aatcagtgcg ctaattattt aattagcgca ttctttttgt taaaaagggg taaagtcaga
     2881 taaactgttt catcaatttg cgcaagtgaa aggggaatgg atgatgaatt ttcatattag
     2941 gaaagcaact aattcggatg ctgaagccat tcagcatgta gcgattactt cgtggcatca
     3001 tacctatcaa gatttaattc caggcgatgt acaagacgat tttttggaaa ggttttataa
     3061 cgttgagacg cttcataatc gtatttcagc gactcctttt gctgttgtgg aacaagcaga
     3121 caaagtaatc ggatttgcga attttattga acttgaaaag gggaagagcg aactcgcagc
     3181 attttattta ctaccagaag tgacacaacg cggacttggt acagaacttt tagaagtagg
     3241 aatgactcta tttcacgtgc cattaccaat gttcgttaac gtcgaaaaag gaaacgaaac
     3301 agcgattcat ttttataagg cgaaagggtt tgttcaagtg gaggaattta ccgaggattt
     3361 ttacggttat ccgctggaga caattcgttt taatttgaat catcatgcgt ttgaagaaga
     3421 ataaaaaaat gtctattcta gttgaatgaa tcaattagga tagacatttt tttatttcgt
     3481 agcggctttt ccactggtag attttccacc gcgtaaaaag aagaagatga tggcaagtag
     3541 cgccatgata actcctgcga gaatggatac gccaacagaa atgagcatac cagaaacttg
     3601 gataatactt aaaatgatga ctgctgcaac aaccccgtaa gcgaagcccc atatagcaaa
     3661 tgtgaagtaa ctagcttttt tgctaaaccc gtaaaaaatt tcgcctaacg tagaagcaac
     3721 taaaattaca ggagctgcaa aaagtatcgc tgaaaacaca agctgtggcg taacgttgtc
     3781 atagaggatt gtttcgacta aaagcgtaga aaaaattcct aaaacaaaaa tcgataaata
     3841 agcaataata aaacgcatca aaaaaacctc ctaaagtaca ctatattata gcataaatta
     3901 ggaagttagc ttaacatcta gcccaattat cgtcactatg ctttacgata cgtgtaattc
     3961 cccgaatcaa gttgaaaatg agtatcgata catttagaaa aacgataaaa aatacagtag
     4021 ctaaggcaag aaagttaatg gtatctgcac tattggtact aaatggaaca ttgttgtaaa
     4081 gtaaaatcat tacaactaca ccagcgacaa aagttgtctg tgtgaggagt gcccatctta
     4141 catgatgccg aatttcttta tcttttgttg tacaccagat aatcgcggga gtaatgaccg
     4201 gggcaaagaa aagactgaaa taactaagcg cactaataat ttttttatct aacatttctc
     4261 atctatcctc tcatttgttt ataagtctag tatagcgggg aaagagaaat ggaaccatcg
     4321 aattaggtga cgatatacag aggaagatga cagttttgtc atatacaaaa acgcctcttc
     4381 gaaaaaatca aagagacgtt tctttatatg actgatttta gggaccaaac tttactgcgc
     4441 catcttcggt acattagaac agctcgaacg ccttcatcaa taatataggc gagccaaacc
     4501 cctacaagcc caagaccagc agagatacca agtacatagg agaacggcaa actaacaatc
     4561 cacataacga taagtccgca tataaatgga aaacgaacat cgcctgttga gttaagactg
     4621 ctaataatga taatattcgt cgcacgtcca agttctagga aaatcgaaag taagaacaat
     4681 tctttcgtca tcgcaatgat ttcggtattg gtagtaaata aactcataat tggttccgcg
     4741 aaaaggtaaa tcgaaacgct gaccacaatt gcgacaacca aaccaatctt ccaactacgt
     4801 agaccttgct tataagcttt atcgatttct tttgcaccaa ccgcgcgacc gataataatt
     4861 tgagaggcct gaccgagcgc gatagcaaag agtgcgacaa actggctaac cgtcgaagca
     4921 taaacttttg tggtaagcgc ctctgtacca agaatcgcaa taattgcggt aacaactagt
     4981 tgcgagccgg catacgataa attttcccca gcagagggaa ggccaagtcg taaaatcgaa
     5041 taaagtaatt ttttggaaac ttgctccagt tttttgaaat ggaaagtata gccgatatat
     5101 tttcgcagca tccagatggc tagacccatt ccgacgaagt ttgcgacagc agtggaaata
     5161 ccaacacctg ctaccccgta atctaagtat gcaagcgggc cgtacaggaa taagtaatta
     5221 ccgacaacat tgataatgct aatcgtcaca ggaacaagaa tggattgtct tacgtaacca
     5281 tgcgcccgga gaataggcaa aatcgaagca tgaatagcga taacaaccga gcttccaccg
     5341 ataatttcta aaaacggtgc accaacttga actaaatgag gatcaattcc catccaagtc
     5401 aggaagtttt tcgacataaa aatgaaaata atactcatca caattccaat taagaaagcg
     5461 accactaagc catttgtaat cacattttca atttctttat gttttttggc accaatcatt
     5521 tgggcaacga taatctgtac gccaacactg ataaagccgt aaataataat agaaataaca
     5581 agaatctgat ttgctacccc tgtcgcagct accgcatcat ctgaataatg ccccaacata
     5641 aagacatcaa tataactaat catcagacgt aaaaattgct ctagaaaaat cggccaagca
     5701 agcgtaaaaa gacttatgct ggcgacttta tgtactgaac tcacttattt ccctcccttc
     5761 gcattaacac aattaaagcc attataaggt aattaaagtt aaaagtatag attaatttca
     5821 aaatcgctcc aagatatcgc ttgacaaaaa tcgaatatct catataatta gttaggtaaa
     5881 ctaatcaaat gatggaaaga agtggagaaa tgtcttcgaa aaatcaagac ttggggcact
     5941 cagtaatcaa ggctttcatg aattttaagc atgctgaaat aaagagtttc caaattcccg
     6001 gttacagtaa atctgaaaca agatttattt ttattttatc tcgtgggctt aaaagcagag
     6061 ggccaaaaat tcgtgtttcc gatcttggtc acatgcttag aatttcaaaa ccaagcgtca
     6121 cgcaaatgat tcaatctttg gaaggaaaag gactcattaa acgtgttcaa aacccagaag
     6181 ataagcgctc gatgtatgtg gaattaacag aggtcggagc aggcgtgtca gaaaaaatgc
     6241 tcgatgaatt tcaagctagt tttgaagata tgcaggagtt tttaggcgaa gacgatatga
     6301 aaaaattgat tacactccta gaaaaactga cagattactt aaacacaaaa tccgaaaata
     6361 aggaggcata aaccgcaaat gatgaaattg atgaaaagat taaaacctta ttggctgagc
     6421 attacggccg tattagtcct tactttcggg caagtcattg gacagcttta tttaccgacg
     6481 cttatgtcga acattatcga caaaggagtt gtaacaggcg atacagacta catttggagc
     6541 actggaatgc aaatgttact tatatcattt gcttcagtta ttttgtcggt catcgtcgtt
     6601 tatctcgcat ccagaatttc gatgggattc gggaaagatt tacgcgataa aatttttaca
     6661 aaggtagagg acttttcctt acaagaattt gataaagtag gaacttcttc cttgattact
     6721 agaacgacaa atgacgttgt tcaaatccaa aatgtacttt atatgatgat gcgattaatg
     6781 gtgatggcgc caattatgtt gctcggcggt attattatgg cagttggcag ggacgcgaaa
     6841 ttatcgctta tttttgtcgt tgttttaccg ctactacttc tattagtagt tattcttggc
     6901 ggaaaagcaa tgccgatgtt taaatcactt caaaagaaaa tggacaaatt aaaccgcgtt
     6961 attcgtgaag ggttaaccgg gattcgtgtt gtgcgttcct ttaaccgcaa tgaagatgaa
     7021 ctcgaaaaat ttgaagaagc aaacgctgac tatgctacta cggcgattaa agttaaccga
     7081 ctgctatctc ttatgagtcc attaatgatg ctactgatga acttaacttc cattgcgatt
     7141 gtctggattg gttcgatttt tattggcaat ggtgatatgc aagtagggga cttgatggcg
     7201 tttattcaat acgcgatgca aattatgatg tccttcatga tgctttctgc tgtatttatt
     7261 atgattccac gtgccggagc ttctgctgag cgtattaatg aagttttaga tatgaatgca
     7321 gaaatactta accctgaaaa tccaaaaaca agtgcaccac cagcaaaact ttcttttgaa
     7381 catgttactt tccgctatga aggcgctgaa aaaccagtaa ttgaagatat tacttttgaa
     7441 gctaatgctg gggaaacagt tgcaatcatc ggaagtaccg gtgctggtaa gtctactttg
     7501 attaatatga ttccacgttt ttatgatgtc gaaagtggtg ttgtaaaaat taatggaatt
     7561 gacgtgcgtg aaatggatca atccagtttg cgccaaaaaa ttggtcttgt gccgcaaaaa
     7621 gcggttctat tcacaggaac aattgcttct aatatgcgct acggaaaaga agatgcaacc
     7681 gacgaagaaa tttgggcagc acttcgaaca gctcaagcgg aaaactttgt atctaaactt
     7741 gcaaatggtt taggaagccg cgtagaacaa ggcgggaaca acttctctgg aggacaaaaa
     7801 caacgtcttt ccatcgcacg ttctttaatt agaaaaccag aaatttatat ttttgatgat
     7861 agtttctcgg cgctcgattt caaaacggat gcgaaactgc gtgaggcttt gaaagctgaa
     7921 acaaccgaag ccgtgactct cattgtggca caacgtatta cctctgttgt caattccgac
     7981 caaatcattg ttatgaatga aggtaaaatt gctggaattg gaacacatga agaattgaaa
     8041 gaaacgaatc aaatttatca agaaattatg aggtcacagc tgtcagagga ggaaatcgca
     8101 tgagtggtcc aggtccaggt ggtggcatga gaatgcaaac gaccgccaaa ccaaagaact
     8161 ttaaacaaac actattccgg cttcttggct atatgaaacc tcgttctgtc gcaatcatcg
     8221 tcgtgtttat ctttgcgatt ttatccacga tttttaacat ttttagcccg aaagaactcg
     8281 ggaaagcaac aacggaaatt tttaaaggtg ttatgagtcc ggctgggatt gataacgata
     8341 agattttcaa tatattaatg attgttttag tcttatacct tggtagttcc ttatttagtt
     8401 tcattcagca atacgtcatg tcgagtgttg cgcaacgaac tgtttatgat atgcggaaag
     8461 atttaaaggc gaaaatggct cgcttgccgc tgaaatatta tgatacacgc tcaaatggtg
     8521 atattctaag tcgttctgtt aatgatatgg ataatatcgc aaacactttg caacaatcac
     8581 taacccaagc tattaccgcg attgtccaaa tgattggtgt tttaatcatg atgctaacaa
     8641 taagctggca aatgacatta atcgttctag tgacagttcc aatcagtatt attttagtcg
     8701 ccattattgc tggtagatca caacgttact tcggcgcaca acaacgtaat ctaggtattt
     8761 taaatgatac tgtagaggaa acttacggtg gccaaacgat tattaaagcc tttggtcaag
     8821 aaaagaaaac gttagtaaaa tttgatgaag taaatgaaga ttatttcaaa gcagcgaaaa
     8881 aagcgcaatt tatttccggg attatgatgc cggtgatgca atttgttggt aacttaggct
     8941 atgtcggtgt ctgtgtggcc ggtggtattt ttgttactaa tggaacgctt caagtggggg
     9001 atattcaatc atttacgcaa tatgttcaat tatttacgca accaatttca agtgtggcaa
     9061 atattgctaa catcattcaa tccactattg cttcggcgga acgtgtattt gaaatgatgg
     9121 atgaagaaga agaaaaagac gaaattccag ctaacgttaa tcaagttgct ggcgaagaac
     9181 acagcattgt attcgaccac gtgaaattcg gttacactcc ggataaacct ctaatgactg
     9241 acttaaatat tcatgtggaa gaaggccaga tggtagcaat tgttggtccg actggtgctg
     9301 gtaaaacaac cattatcaac ttgctgatgc gtttttatga tgtagatggt gggcagatcc
     9361 ggatgaaagg tattgataca cgcgatatga ccaaagatgc tgtccgcgaa aaattcggaa
     9421 tggtactgca agatacttgg ttatttaacg gaaccattgc cgacaatatc gcatacggtc
     9481 gtgaaggcgc aacgaaagag gaagtcatcg gagcagcaaa agcagcttat gcagatgatt
     9541 tcattcgcag acttccaaat ggttatgata ccgtcttgaa tgaagaaggt tctaacattt
     9601 cgcaaggtca aaaacaatta ctaacgattg cccgtgcgat tttatctgat ccatctatct
     9661 tgattctaga tgaagcgact tctagcgtag atactcgtac agaattaaac attcaacttg
     9721 cgatgggtaa tttgatggaa gggcgcacaa gctttgtgat tgcgcataga ctttcaacta
     9781 ttcgtgatgc agacttaatt ctcgtgatga atcacggtag tgtaatcgaa caaggtacgc
     9841 accaagaact actggacgca aaaggcttct acgctgacct ttacaacagt cagttcacag
     9901 gagctcaagc cgtttaaatg taagaagaca atgtggctca cccgccgcat tgtctttttt
     9961 tgagcaaaaa atttgtttga tggtggatta ggcgttatgg ttaataaaga agaaattgaa
    10021 gaggtgaaaa tagatgtatc aatccattac tgcaaatgat ttagaacaag acttaaaaaa
    10081 agcgtcacat aatatcttag atgtcagaga tgcagatgct tttgttgaag gacacattcc
    10141 ggacgcaata aatattccaa ttaatgaact accagaaaaa ttagcttctc ttgataaaga
    10201 gaaaccttat acaattatct gttatgctgg aggtcgttct gagcgcgcga gtcaattttt
    10261 agctgcagaa ggctttgatg taacgaatgt aatgggaggt atgggagcct ttcacggtat
    10321 agtaactaaa taaaaaaaga agtcgcgact aaaattctag tcacgacttt tttatttagc
    10381 tatgttttct ttgacggaag aagaggatag ctactccggc aatgataatc ccaattaaca
    10441 cagtagttgc ttgactcgcg tcgccagtgt ttggtaaagc ggcatttact tctgagttag
    10501 acggatttga tgcgttttca gagttcgcag attgtccatt atctgggttg ggattgatat
    10561 ttggattatt aggatttggc gtaggacctg gtgtgggatc agggccggga gcaggtggtg
    10621 tcggaggttc atttccctct accacattta ctaaaacaat aactgggtca gcatttagtc
    10681 catctgcact taccgcattt aaagtcactt tatacgttcc gactttggct aaatcaacaa
    10741 cgctatcaaa atcactcgtt accttactac catcacttgt ttttgctgaa atatcttgta
    10801 aaaattgctg gtctgtcttg gttgaatctt tcgtgtaaga aatgctctta tctgctgtta
    10861 tgactggttt tgcaagtatg gtcaccgtta cttgtgttgg cgttgctttt aaaccagcag
    10921 cattttcggc atttaatgtc accgtgtaga caccgggttt actaaagtct acaaccgtat
    10981 taaaatcact agtaacaggc gttccatcat ctgtctcagc atgaacatct tttaaaaatt
    11041 gttcttctgt aactgtggtt tgttccccat aacttattgc tgaatcattt gtaatggtta
    11101 gtgtatgatc gatgtcaaaa tagtggtcgt agcttccccc tgatacggaa taattattga
    11161 aatttggcgg agtttgatac gatccggcgg ggttattgta taatgcattg tattccattt
    11221 tagtaatcgt atcaaaataa cttttggtaa ttccacttac cgtaattcct ttatcgtcaa
    11281 tggttaaacg gctaccgtca attttggtct catttaaagt gaaatacgtg ctagcagaac
    11341 ttgtattagt tgtaaaaggg aacaaatagc catcaaagtt tactcctcgt tcagtcatta
    11401 aagtaaacgg cacaaagata gtttggtttg cttcatcaaa attcaatgca gagcttttga
    11461 tagagctgtt gattaaaacg gttctaccta cgttttgtcc gtaagccgat aaactcacta
    11521 atttaggaaa agtatcaatt ccacggaaat cattaattcc acaaaactgg acaaataaag
    11581 tagctaaatt tggaatggat tttagtggca tgatgttagt aatagaagga ttactgtcta
    11641 aatttaagta acttaacttg gacattttat taaatttagt tagtgcatta ttgtcgagct
    11701 taccaggact tagatttaag ttggtgatgt ttgataaatt attcaaatcg ggtaatgaat
    11761 catttgttaa gttatctccg gcaatgctaa gattagttag gctaggtatt tttgcgacta
    11821 aggcataatc tgttacccct gtattagaca aatgtaaaat tgttaaatta tgtgcataat
    11881 caagacctgt taaatcagtt aaactactgt tactaatagt gacatttgta atagtatcca
    11941 tctgagcttc agtaatatca cttgtgcttg attgtcctaa gagtccattt aaataacttt
    12001 tcaaaactgg gtcaggaatg ttgacaacat cttgagcggc ttttacacta atttcttctt
    12061 ccgctgagac attcgcggaa aatgatatag taaatggcat cattaaaagg acgcacaagc
    12121 caattttgac tcccattttt ctcatgaatt tttcctcctt taataacttt tgttcggtat
    12181 aatcgtatgt attcttaaaa caattcctct tttagtaata tgttaaacaa aatagtatca
    12241 aaagtgttgt taaattaaat cgaaaaaaaa ccgtgaaagc gattttcgct ttcacggttt
    12301 ttttattaaa agattttagc taattctact gcttcttttg ctcctgcaga gataatgtct
    12361 tttgcttgat caggttttgc gttatgacct tctacgataa ccatttctgg ctcagagata
    12421 ccgaagtgag ctaacacatt ttttacatag ctcagggaca tttcgaagct ttgcattggt
    12481 ccgtcagagt aaatgccacc gcgagcatta agcagggcaa tttttttatc agcaactaaa
    12541 cctacagggc cgtttgcagt gtatttaaat gttttgccag cttgatttaa atagaataag
    12601 tatgttaaaa attgggctgg gatactgaag ttccaaagtg ggaacgccat gacgattttg
    12661 tctgcagcta aaaattgatc taagtagctg ttagcaatat cagctaagcg tttttcttct
    12721 gggcttagtg tttctccagc tgcttcttta tgtaatccac tcatcattgt tacatcataa
    12781 taaggtagat ccgcttcaaa taaatcaagt tctgttacat tatcgtccgg atgggacttt
    12841 ttgtattccg ttagaaagat ttcatatagt gccacgctga ctgagcgttc ggcaggtaaa
    12901 ccatttgctt tgatgaaaag tacgtttgtc attacatctt gcctccattt tttttgaatt
    12961 atctattaag tgtagcccat tttcacgata aacagcaagt atattgctta caaaaaatta
    13021 gccgctaatg tttgagcaga tattttgtgc ttttggaaag gaagcgtata atagttgata
    13081 tatcatttga cgtatcaact atgggggtga aaacgctgaa accatgtaca gaacgatctg
    13141 aattacttta ccggatgcac ttattatcca aggaaattag ccatgtattt gaacaacaaa
    13201 cgaatatgag ttttacgaaa gtagagattc tatttcatat tcaacaaaca ccaggtcaaa
    13261 gtcaaaatcg actacgagag aagctttata ttgattcggc aagtattacc cgtcatttga
    13321 agcgaatgga agcgcaaggg ctgattgttc ggaaaaagca agatgaaaac aaacgctata
    13381 cgtatttatt tttaacatca gcgggtgagg cggaattagc cactttactt ttggaaaaag
    13441 aaaaatttca gaacggggcg ctagaagcct tttcagaaga agaagttagt gcgttactta
    13501 aatcagtcac aaaaatgatg aataatgtag agaaaatgga ggagaagtaa aaatgaaagc
    13561 agttgtaatt gaaaattatg gtggcaaaga agaattaaaa gaaaaagaag tagctatgcc
    13621 aaaagcgggt aaaaatcaag tgattgtcaa agaagcagcg acatcaatta acccaattga
    13681 ttggaaactt cgtgaaggat acttaaaaca aatgatggac tgggaattcc cgattatttt
    13741 aggatgggat gtagcgggtg ttatttccga agttggagaa ggcgtaacag attggaaagt
    13801 cggcgatgaa gtattcgcac gccctgagac aacgcgtttt ggtacgtatg ctgaatatac
    13861 agcggtagat gatcacttgc ttgcaccact tccagaagga attagttttg acgaagcagc
    13921 atcgattcca cttgcaggct taactgcttg gcaagcattg ttcgatcacg cgaaattaca
    13981 aaaaggtgaa aaagtcttga ttcatgctgg tgctggtggt gttgggacgt tggcgattca
    14041 gcttgccaaa catgcaggag cagaagtaat cacaacagct agtgcgaaaa accatgaatt
    14101 actaaaatct cttggcgcag accaagtcat tgattataaa gaagttaatt ttaaagatgt
    14161 tctttctgat attgatgtgg tgttcgatac aatgggtggt caaatcgaaa cagatagtta
    14221 tgacgtatta aaagaaggca cagggcgttt agttagtatc gtcggtattt caaatgaaga
    14281 acgtgcgaaa gaaaaaaatg taacagcaac tggaatttgg ttgcaaccaa acggcgaaca
    14341 gctgaaagaa cttggcaaat tgcttgctaa taaaacggtt aaaccaatcg tcggcgcaac
    14401 tttcccattc tctgaaaaag gtgtttttga tgcacatgca ttaagcgaaa cgcaccacgc
    14461 ggttggaaaa atagtcattt catttaataa ataagatttt cggaaagcta gatgctatca
    14521 tctagctttt tttgttgttt gctggaataa gttagatggg ctataatagc aaaaaaggtg
    14581 gtgtctagat ggaaataaga gaattgaaga atgggcaaat aataatgatt cgggaagcta
    14641 caaaagagga ctctagtaat attattactt atttaaatga agtagctggt gagacagatt
    14701 atttatcatt tggtcaaggt gagtttgcgt ttagtatagc ggaagaagct gaatacatag
    14761 aagaaaatga taagaaccca ggctctgtta tgttgttatg ttttattgat gatgaacttg
    14821 cgagtatttc tcaacttatg gggcatatga aaaagcgaga attacatact tctgaactag
    14881 ctatttcgat acggaagaaa tattggggtc tgggtattgg cacaatttgc atgggtgaat
    14941 taataaaata cgctaaaagt agcgagtatt taaagcttat ctatttagaa gctgtatcag
    15001 agaataaacg cgcaattaat ttgtacaaaa aatttggatt tatcgaagct ggtgaaattc
    15061 cagcgttaat gcaagtggac agccgttatt tagatgtaac catgatgtat ttggttattt
    15121 agtcttcaat aagaaagact agatcattaa ctacttctat atcactaagt tgcttcgcga
    15181 taatatcggc tccagtgtta agaaaaatag caatttgact aagaatacga aggctaatgt
    15241 cagaagtacg aatatctttg tcaataattt tctgtaaaga gccttctttt aagcgagtat
    15301 tggattcaac atcagtggta gtagtgttat tatttgctaa caattgttca atcggatgca
    15361 tcatttcacc tcgtttcaat agttaacttt atgaattaat tataactaaa tttgcttctt
    15421 ggataaacta taaagccttg aaaattaaac aaaaaaggga gaagcaaatg aatgatttaa
    15481 aagacatttt taaagtattg tatcagttta agacagatta tctcaaagta accttattat
    15541 taacaatctt acaggcattt gtgatggggc catttattta ttatttcttt ttctttattc
    15601 tccgagtcat cggagtgcca ggaattacag acgccaatct tggagaagtt ttttcgagtc
    15661 ctgttgccgt tattatgctg ctgattttag ctttactcat tttactgttt atatattatg
    15721 aactgggttt ctttataatg atggcaattt atcaattgcg gggagaaagc tataccgttt
    15781 tcaaaatcat acaaagactc aatgtaaaag cgaaatactt tcttagttat caagcaattt
    15841 attttctgct atatttcttt ttacttttgc ccattgcagg attatcttta ccaattacga
    15901 taacagaaaa cctctattta ccacatttta ttacggatga attaatgaaa acgacgacgg
    15961 gaacgtggct gtatgttatt gcaattgcga ttattttcta tattagcgcc agacttgtgt
    16021 ttgctttgcc ctatttcatt gaagacaaat cactaaaaat aagtggggct atccgaaaaa
    16081 gttggaaata cccgcaaaaa aacttatttt tcatgttact aaaatgggtt ttaataattg
    16141 ttgcgattgg ctttttagta tcgattatcg caacgattat gatgttgccg cttctcttaa
    16201 tagaaaaaat aactccggga attgcggtgt ttatagcggg tattacttta accatactac
    16261 aagtgatagg tttctttgcc gctggaattt ttcaaggaat cattgcgcaa ttattagtga
    16321 agaacgcctt tgctatagaa ggacaaccag cacttgtgac gcgcaaccag ttcccgcata
    16381 aaaagcgatt tattattgta gcgataatcg ttttcattat ttttagtagt tttaatattt
    16441 atacagtgaa tgcgacttta tatgaaccta acacgaaaat aatcgcccat cgaggtgata
    16501 caatgaatgc tgttgaaaat acggtggaag ccattgaatc agctgctgag gctggggcag
    16561 attacagcga aattgatatt caagaaacca aagatcatca gtttgtcgtt ttccatgata
    16621 tgacactgag aagacttgct ggcagttcta aacgagtagc agatatgact ttaaacgagt
    16681 tgcagcaaac taaagtgaag agtggcgact attcgtctca tatagcttct ttcgatgaaa
    16741 ttattaagac ggcgaaaagg aataagatag atttactcgt ggaagtgaag ttgcatggcg
    16801 gggaatctag cgatatggtg gaacgacttg tcacattgtt aaagaaagaa aaagtaaccg
    16861 ataaatatct agtccaatcg ttggaccaac cagttatcga aaaaatagaa caagctgacc
    16921 ctacgcttga aactggcatc atattagcgc ttaatattgg aaacttacca aaaacatctg
    16981 ccgattttat tgttttagaa gatttttcta ttaataaacg attacttaca caagccagac
    17041 aaaataataa aagggtgttt gtttggacgg taaataaaga aaaactaatg caaatgtatt
    17101 tgcgaaagaa tgtagatgga atcattacca attatcctaa aaaggcgata gagcttaggg
    17161 aatcttttaa tgaaaatgat tctttgcgaa gtcgtattga aaataggtta ggcttttaaa
    17221 taaaaagccg caaacaagca ctgtttgcgg ctgattttta ttttagttca aatgattttt
    17281 taacagcgtt tttgctgaaa ctaattaatt cttttgcttc tacatcgact ttattttgtg
    17341 tatcttgtag tttataaagc tcagttactt ctaaagttcc accaggttgt acgtcttttt
    17401 cagagccgcc catactagca tcagctgata cggttgtttc taactgagtg ccattttgaa
    17461 aagcttgttg atcaatagct accataaaag aaatgttttc tttgctgtta tttgtgaatt
    17521 tagttttaat tgcgatggca ttgttacctt caaaatcctt aactacttcc gaactaagaa
    17581 tttctacttt ataatctcca agttcatttg gatttgcttt ctttttcgta tcggctttag
    17641 ctgtttctgt tttttctgta cttgctttat cctcagtccc accacatgca gttagtgcta
    17701 gggcaaaagt aacaatcccc attaatagta aaacgctttt caattttttc attttcttct
    17761 ctccttcatt ttttatctgt ctctattaga ccatgtggag agaataaaag tcctatgcag
    17821 tgggcatagg actaggaaaa gatttcatta taaataccat aaatacttac acaaacgata
    17881 atataaatga caatacctgc ttttcttgta ccaggagagg atgatttaag taaaggtaat
    17941 ttggaccaaa taccacaaag attagtaaaa atgacaaaag caggaacgat aagaaagaaa
    18001 ttgttaaaaa agtttactat tggcgacatt ttgacgccct cggttggcgg ggtgaataaa
    18061 ccaaatagca agaatatata acctaatacg ccgacaatca ttttccaagg tgtccctgtt
    18121 ctaaaaccgg gaatatgttt ataccatgga acaaagtcct tttcgtaatc cgcggataca
    18181 ttttcccagt cagattcagt agaaaaatta tctaactcag taaaatcgga taattcagag
    18241 acgtagcttg ggccaagtga gtcgtttttg acggctgtcc tgaaatcttg aatggattga
    18301 taacgctgtt caggatcaaa ggcagctgct tgcatcgcaa ttttttcaag cgaagtggca
    18361 tgttctttat ctggtaaagt attttttcct aataaaagtt cgagcataag aacaccgata
    18421 ctgtatatgt ccgacctcac gtctgtttgt gaatagccgt attgttcggg agcagcgtaa
    18481 ccgattgtgc cgaggttgac agtgtcttga tttttaccga cttcaaatac acgggaagca
    18541 tcaaaatcaa ttaattttaa tacgccgtcg ctagatatca taatgtttga tggcttaata
    18601 tctcggtgaa taatcgcatt agcgtgtaat tctgtaagtg catcagatag catcagcatt
    18661 aaccgcgtaa cttcatccgc atcaaacgta gcatttgctt tcattaaatc agccaaattt
    18721 tttccattta tgtattcttc ataaacaatt aattgattgc catttggaat catcacttcg
    18781 atttttggca aatatttact agataaatct ttaagctgtt cgatcacagg ggcaaaactg
    18841 cttggaatta ttttacggac aaataattct ccagtagatg tatttctcgt tagcacagca
    18901 gggttttctt tattatttag attatctaat tctttgtatt gttcttctat aaaagcgagt
    18961 gtcatttctc ccatttatct aaaacccct
//
LOCUS       DASDYK010000045        18924 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.045, whole genome shotgun sequence.
ACCESSION   DASDYK010000045 DASDYK010000000
VERSION     DASDYK010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 18924)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18924)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18924
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.045"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     regulatory      complement(<1..75)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            228..1409
                     /locus_tag="U0308_001565"
     CDS             228..1409
                     /locus_tag="U0308_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM2316532.1"
                     /translation="MKISKRLQNLPDQFFSSLVEKVGKKVAEGHDVINLGQGNPDQPT
                     PKHIVEAMKTASEKPLNHKYSLFRGKHELKQAAADFYAREYNVTIDPNTEVAILFGTK
                     TGLVELPMCLMDPGDTMLLPDPGYPDYLSGVVLGEVQFEKMPLIAANNFLPDFTKIPE
                     DIAEKAELMYLNYPNNPTGAVATADFFEETVAFAKNHNIVVAHDFAYGGIGFDGKKPI
                     SFLEANGAKEVGIELYTLSKTYNMAGWRVGFAVGNSEVIEAINLIQDHMYVSLFPGIQ
                     DAAIEALTGDQTCVGELTARYESRRDAFISACKKIGWEAVAPAGSFFAWMPVPENFTS
                     SEFADYLLEEVSVAVADGSGFGEFGEGYVRVGLLMDEERLEEAVTRVSKLHLFDKVTQ
                     Q"
     gene            1622..2335
                     /locus_tag="U0308_001566"
     CDS             1622..2335
                     /locus_tag="U0308_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2316533.1"
                     /translation="MAEKKILVVDDEKPIADIVKFNLNKEGFDVYCAYDGDEALELVE
                     EVQPDLILLDIMLPGRDGIEVCREVRKKYDMPIIMVTAKDSEIDKVIGLELGADDYVT
                     KPFSNRELIARVKANLRRHSQVSSNAAEEEENSELEIGSLIIHPDAYVASKRGETIEL
                     THREFELLHYLAKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHP
                     AWLVTRRGVGYYLRNPEQE"
     gene            2520..4352
                     /gene="walK"
                     /locus_tag="U0308_001567"
     CDS             2520..4352
                     /gene="walK"
                     /locus_tag="U0308_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall metabolism sensor histidine kinase
                     WalK"
                     /protein_id="HEM2316534.1"
                     /translation="MHKMRFFQSVQFKLVIMYLLLIIVAMQVIGAYFVRELEGQLEKN
                     FQDSITNSITLLDYNAREEIIKNSDNSVKLQNDIRELLVDYSRASSNLIEVRIVDDKG
                     KILGTSNLNNQGIVGQKSNDPLVKRTLSLGTTSEDKIYKDESNKNNRVWVNVSSIKNK
                     GQVIGAIYLVADIESVYKQVDDITNIFITGTLIAMIITAVLGILLSRTITKPIIEMKR
                     QAYAMARGNYSRKVKVYGVDEIGELADSFNTLTKRVQEAQAMTEGERRKLSSVLAYMT
                     DGVIATDRRGKVILINTPAEKMLRVKHESANGRSIIDVLDIGDTYQFEDLMEVDGSLT
                     MDRSTLDKPYVLRANFSVIQRETGFNNGVIAVLHDITDQEKVDQERRDFVSNVSHELR
                     TPLTSMHSYLEALSDGAWEDKEIAPRFLEVTQNETERMIRLVNDLLKLSRMDGGREQL
                     EKSFVNFTDFFNHIIDRFEMMKKETIMFKRHIPREPVIIEIDEDKVMQVLDNIISNAN
                     KYSPDGGRISFYLKKFEDEIEVSIADEGLGVPDEDLANVFDRFFRVDKARSREMGGTG
                     LGLAIAREVIEAHGGRIWAERNKTKGTIIKFTLPYSDLPEDDWE"
     gene            4349..5671
                     /locus_tag="U0308_001568"
     CDS             4349..5671
                     /locus_tag="U0308_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM2316535.1"
                     /translation="MMKKTGFRSFILTILVVLSIVLSYFIWKGQPDYEAINVKEVEKT
                     TIDKTMTTSQVFKPYKLAVNANENNYQSLDADLLNELMAQGKAFSFSEVVLASKKSSE
                     DYEKLIHKNGTIEIIFPNNIPFSIFAQIFQVEGEGLESAFFNRIVFDINKTDTGLHSV
                     YFTNDDQENIYQSSLQNKDIDKIEKIVKKNESKLTQNDKLISNKRNLFLSSEKTKLNR
                     KKYIIDSLEINLFTSALFQDSGTVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTN
                     PEDLSSVKRAGLIQDSFNFVNDHAGWTGDGAYYFTGYAAESATTNFSLFIDNLQVYNE
                     NGMADISVTEGLEAVYKYMRPFFRLDTDVPGEKKEVTLPSSYSVYSALAQNPNVKAEE
                     IEDIVPGYHMTRSESSGMNRLVTLEPTWLYKYHDKWFIFQPDAEKAGE"
     gene            5674..6513
                     /locus_tag="U0308_001569"
     CDS             5674..6513
                     /locus_tag="U0308_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system regulatory protein YycI"
                     /protein_id="HEM2316536.1"
                     /translation="MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEE
                     RLKADNISHPDLSTKPTSGSIFTTERAAFTTKDVSDLTGQAITLKDNNKQIYSVLQTP
                     VKAGKKGSNPEFQKFMESDVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQIT
                     FYLDQDDRVISYEQTWMSKQDDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGY
                     YTTVQLPSGNVYFPVWCFEVKHSGETNYVLVNAKDEQVINQSDNKSTTEPGTELSSRQ
                     KTK"
     gene            6633..7463
                     /locus_tag="U0308_001570"
     CDS             6633..7463
                     /locus_tag="U0308_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2316537.1"
                     /translation="MFANKILTEKDTDQIRFSILASGSSGNATLVETGDQKILIDCGL
                     SGKKMEGLFAQVGRDMNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDN
                     MIGEVSSDQKFQFDMETVKTFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGY
                     VSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEV
                     ITDQTKRIYLGHLSKDNNMKELARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI
                     "
     gene            7561..9063
                     /gene="htrA"
                     /locus_tag="U0308_001571"
     CDS             7561..9063
                     /gene="htrA"
                     /locus_tag="U0308_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease HtrA"
                     /protein_id="HEM2316538.1"
                     /translation="MDEKEKNLNENSENESTPKREVEDTLHTPESAQPVQETPIVEGV
                     TPEGEKFAGATEDAAEASSTNAFFEEASNKEPEPARPAPGPRRAGTTGGGAVPPNRVN
                     NGGSGNGNGEPPKRGKHFIGYFLTALIGVIIGGLIIFFVAWDNGDNADTTSNSNNKAT
                     KVEKVSVDTTSDVTKAVDKVQDAVVSVLNYQSSSSLDGTTTSEQEASSGSGVIYKKAN
                     GKAYIVTNNHVVADANKLEVTFTNGKKSEAKLLGTDEWNDLAVLEIDDKNVTTVAAFG
                     DSDSLKLGEPAIAIGSPLGTEFSGSVTQGIISGLNRAVPVDTNGDGTEDWEADVIQTD
                     AAINPGNSGGALINIEGQVIGINSMKISMENVEGISFAIPSNTVEPIIEQLETKGEVE
                     RPSLGVSLRDVDTIPETQQKNILKLPDSVDYGAMVQQVVSGSAADKAGLKQYDVIVEL
                     NGQKVTNSMTLRKILYGNDVKIGDKVKVKYYRDGKEKSTDIKLEAAKTTT"
     gene            9751..10230
                     /gene="rlmH"
                     /locus_tag="U0308_001572"
     CDS             9751..10230
                     /gene="rlmH"
                     /locus_tag="U0308_001572"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEM2316539.1"
                     /translation="MNIQIVTVGKLKEKYLVQGIAEYLKRLSAFAKVTIVEVPDEKAP
                     EVLSDAEMKQVKDKEGARILAKIPDDAHVIALAIDGKMKSSEEFAADLDKLATYGKSK
                     VTFVIGGSLGLSEAVLKRSNERISFGRLTLPHQLMRLVLVEQVYRAFRIVRGEPYHK"
     gene            complement(10262..11125)
                     /locus_tag="U0308_001573"
     CDS             complement(10262..11125)
                     /locus_tag="U0308_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2316540.1"
                     /translation="MDIENMKAFNKVAELKSISAAANELHHLQSNMSNKIKNIEKQFQ
                     TQLFFRHSNGVEPTKEGEKIYQQFKKMILLWEETIDIINNEEETISIGITQSSLPMEF
                     NTIIKEFYQQFPNKKLSIVSGSTSELIPKIANRELTIAYVAELEKENLFQDSQIISQT
                     LSWDKLVFAGNTAGKSVQKILAEERLYVFSKQCYSYRALAALINDINIPNVSISEINI
                     PETLVEICNNELGIGIIPESIALNYHFLNYETLPTEYASLRKTLIYHADHTISNGEKW
                     LIEKSKPAFKS"
     gene            11244..11981
                     /locus_tag="U0308_001574"
     CDS             11244..11981
                     /locus_tag="U0308_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent oxidoreductase"
                     /protein_id="HEM2316541.1"
                     /translation="MNTTIQQLVKHVSVREFKNERLSDEIKQHLLTAARSASSSHFVQ
                     SFSILEITDEKLRKELAEITNSASYVNQTGTFYVFVGDLYRQSKLLLENNRTLDGLRN
                     MESLLVSVIDATIAAQNMVIAAESLDLGICYIGGIRNDIEKVAELLNLPPFTIPVFGL
                     TVGVPEYKNQVKPRLLLENQVGENQYPHEQFTDLKAYEELTKDYYALREKNQHQTSWG
                     DKNVAFFEEIRRPEIAGFLKKQGFTLD"
     gene            12192..12830
                     /locus_tag="U0308_001575"
     CDS             12192..12830
                     /locus_tag="U0308_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HEM2316542.1"
                     /translation="MKFLKKYGFYFLLLGVLSDFLTPYILGIFYPELNQMTRVMSVFG
                     DVASPVRGAFLVWSVVSGVFFVLALPAIYQSVVKTSRTLAILLASAIGLYGIGDCIFT
                     GLFSIDTEQASWTFSTWVHNIGSGLGYAGFLIFPLFLVILYRKTGDKTRSNIYLVLLI
                     VSLLSAGVYGLARIPAVNDLPVLDKIGFCQRISFFFNYLPIVVFGIDRIRKP"
     gene            complement(12835..14706)
                     /locus_tag="U0308_001576"
     CDS             complement(12835..14706)
                     /locus_tag="U0308_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator"
                     /protein_id="HEM2316543.1"
                     /translation="MTISERQRSLLEKLNDSQKTVTAKALSEMLGVSSKTVRNDIVQI
                     NQSFSSTIIASKAGKGYFLTPNEQLSQMNLTKNNENLHFELLRHFIEQDHTNFYDLAD
                     QFFISESTLSRIIKELNAVIAEKDESLCIIRKNNELLTEGGEEEKRRIFNLFLNQEIE
                     NHQLSLDKYADYFDYCNLKQLSELIIAYHKKNDFFMNDFSTISFILHIAVLIERISMG
                     SYIERTALLEQDKTSLEMAEHLTETLEEELHIDIPTQELSYIARLYSGKLTTTSTIDA
                     QVFGSVVTRLLEAVDQNFHIDFSADEKIATYLVAHISALYKRANHKQYLTNPLTEELK
                     NKFPFIYNVSVYASAFIQKELAITFPDDEIAYIALHFLSASETINHGKKRKILLVSPY
                     GAGSQRLIHNQLKKIADFSIDLLVSQSIFDIKQFTLDKEIHLIITAEPLNLTTDIPVY
                     HYDLLLTETDLQKIKHILETKPKADSISRKFFKKELFFPKQNFKSKEEVITFLCEQLT
                     AFDYCDSDYVSKVFEREQLSSTCYGNYYAIPHAIQRSAKKNAVAVCALDKPIDWGGNR
                     VKLVLLLTMKEERDNSFEELFGQLVTILNERSFVKKLAKQEDFQQFIELCEQKTLDS"
     gene            complement(14805..16118)
                     /locus_tag="U0308_001577"
     CDS             complement(14805..16118)
                     /locus_tag="U0308_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2316544.1"
                     /translation="MRFNTISEKMDQYISPLANKLSQQRHLKATRDAFMSMLPITLFG
                     SIPIILKAAPVTDDTKNGFLLAWANFAEKYDLILNWISGITLGAMSLYICVGITYYLC
                     KHYHEDFLRPLMFSIAGFFMLVLNPIKMGWDGKEVDISFLDGRGILLSIFVAIVTVEG
                     YHWMRKKNVGRITMPDSVPASLSETFAALVPGIILMTFFSIIFIIFNLLDTTAIQFLY
                     EKMAPSFKAADSLPFTILSIFLVHLFWFFGVHDAALAGILGPIRDGNLSINAAEKMAG
                     QDLTNIFTTPFWTYFVIIGGSGSVLALAFLMMRSKSKQLSTVGKVGFLPSIFGISEPL
                     IFGTPLMLNPIFFFPFIFTSVFNGVITYLCMYFGIVGKTFAVFSWQMPAPIGAFLSTM
                     DWRAIVLVFILIFLNGLMYYPFLKVYEKNLVALEKEAEEENIAAN"
     gene            complement(16123..16413)
                     /locus_tag="U0308_001578"
     CDS             complement(16123..16413)
                     /locus_tag="U0308_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2316545.1"
                     /translation="MKNIMLVCNAGMSTGMLAKKIEAASGNTLNVTAYSESEYTDYLD
                     GFDLVLIGPQIRFLMPQIKQAVSVPVHAISPVKYGIMDGKGVYEDIQKLIGG"
     gene            complement(16430..17821)
                     /locus_tag="U0308_001579"
     CDS             complement(16430..17821)
                     /locus_tag="U0308_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2316546.1"
                     /translation="MNNNFLWGGATASYQCEGAWDVDGKAESMWDYYLHEAGLENGDV
                     ASDHYHRYEEDIRMMKEGGQNSYRFSLSWPRIIKNRQGDINLKGIEFYQNLLDTCKKY
                     DIEPFVTLYHWDLPQYWEETGGWLDHDVCAAFEHYAKVCYDHFGDKITNWTTFNEPKW
                     FVANGYKIGNYPPGYQDTQKTMIAAYNVMYASALGVKAFKEGGYPGQIGIVHSYTPVN
                     GVDESIETKIAMRYADNYCNNWILDTAALGEFPVDLIAELAKSHDISFMKTDELQTIK
                     QNTVDFIGLNYYSRTLVKPYTGGETQLQFNHSGKKGESKVLIKNWFEQVKDPANETTE
                     WDTEIYPKGLQDGLIEAYERYQLPLYVTENGIGVREDVSVAKVDDAYRIAFMNDHINA
                     IFNAIDAGCDVRGYYAWSPFDLYSWKNGVEKRYGLVAVDFKNNQIRKPKASYYWFKEM
                     IESQGKLIKRREF"
     gene            complement(17814..18155)
                     /locus_tag="U0308_001580"
     CDS             complement(17814..18155)
                     /locus_tag="U0308_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2316547.1"
                     /translation="MTDSNELTTELDSMAIILHAGNAKSCAFEALKEVKLQNIEAFTQ
                     KITEAKDEIKLAHRAHAELLRKLSSENRMREVDLLLVHAEGHLSSTDIAVEMIRELGE
                     IYQWKWSLSNE"
     gene            18322..18606
                     /locus_tag="U0308_001581"
     CDS             18322..18606
                     /locus_tag="U0308_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316548.1"
                     /translation="MKKTVHGWEIISNLDIRLYQDEAGGVVILLDKDGFGDQVPVLLN
                     FDDDGVDIKALSHLTKSVRVLLDKKVRIEWHDEYFEERTQAMEYIEVERD"
     gene            18642..>18924
                     /locus_tag="U0308_001582"
     CDS             18642..>18924
                     /locus_tag="U0308_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316549.1"
                     /translation="MSKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGIGMSD
                     GSNYKETDAAGKVSLDLDIDAEGNVKELYIDDAVAITNSYKLKKKGDDEY"
BASE COUNT         5964 a         3167 c         4108 g         5685 t
ORIGIN      
        1 ccttcacttt acgcttaaat aaagttaggt tgccgggctt catcgggcca gtccctctgc
       61 cgctctcgat aagagaaaat attttagaaa aacctgttag ttaaaaatat acgcacatta
      121 ccttaatttg tcaatgcttt tttaagtttt aaaaaaatca tactggacaa atacttcaga
      181 aaactttact attttaatca atgaaacttg aaaaggacgg gtgtaaaatg aaaatttcca
      241 aacgcttgca aaatttacca gatcagtttt tctctagcct tgttgaaaaa gttggaaaaa
      301 aggtggcaga agggcatgat gtcattaatt taggacaagg aaacccagac cagccaacac
      361 ccaaacatat tgtggaagcg atgaaaacag cttcagaaaa accacttaac cacaaatatt
      421 ctttatttcg aggaaaacac gaactaaaac aagccgctgc ggatttttac gcgcgtgaat
      481 ataatgtaac aattgatcca aacacggaag tagctatttt gtttgggaca aaaacaggct
      541 tagtggagct gccgatgtgt ttgatggatc caggtgatac gatgctttta cctgatccgg
      601 gctatcctga ttatttgtca ggagtagtgt taggtgaagt tcaatttgaa aaaatgccgc
      661 ttattgccgc aaataatttt ttaccagatt tcactaaaat tccagaagac atagctgaaa
      721 aagctgaatt aatgtattta aattatccta ataatccaac tggcgctgtg gctacggcag
      781 atttctttga agaaacagtc gcttttgcca agaatcataa tatcgttgtt gcgcacgatt
      841 tcgcatatgg aggtattggc tttgacggta aaaaaccaat tagtttttta gaagcaaacg
      901 gtgcaaaaga agttggaatt gaactttata cactttcgaa aacatataat atggctggct
      961 ggcgcgttgg ttttgcagtt gggaacagcg aagttattga agctattaat cttattcaag
     1021 atcatatgta tgtaagtctt tttccaggga ttcaagatgc tgcaatcgaa gctttaacag
     1081 gagatcagac ttgtgtgggt gaattaaccg ctcgttatga aagtcgcagg gatgccttta
     1141 tttctgcttg taagaaaatt ggttgggagg cagttgcgcc ggcgggttcg ttctttgctt
     1201 ggatgccagt cccggaaaat tttacaagta gcgaatttgc tgattatctg ctagaagagg
     1261 tcagtgttgc cgttgcggat ggtagtggct ttggggagtt tggtgaaggt tacgtccgcg
     1321 taggtctttt aatggatgaa gagcgcttgg aagaagcagt aacgcgagtt tccaaattgc
     1381 atttgttcga taaagttaca cagcagtagc caatttatcc aattttaaga gaaaatcgct
     1441 tgtaataatt cagataatta atgggatgtg ttataattgg ttagtaagtc tattcttagc
     1501 atgttgtttt atgaaggcag gccagaattt aaaatgttta gtgagatttt tatgcattaa
     1561 ataaaaagta tctgtcccgg ttaaagccgg cgaaatccag gaatgagagg actgtaaaaa
     1621 aatggcagaa aagaaaattc ttgtagtaga tgacgaaaaa ccgattgcgg atatagttaa
     1681 gtttaatcta aataaagaag gctttgatgt atattgcgcc tatgatggcg atgaagcgtt
     1741 agaacttgta gaagaagttc agccagattt aattttactg gatattatgc ttccaggtcg
     1801 tgatggtatt gaggtatgtc gtgaagtacg taaaaaatat gatatgccaa taattatggt
     1861 aacagcgaaa gattcagaga ttgacaaagt tatcggacta gaacttggtg cagatgacta
     1921 cgtaacgaaa ccatttagta atcgcgagtt aattgctcga gtgaaagcca atttgcgccg
     1981 tcacagccaa gtcagctcaa atgcagccga ggaagaagaa aacagcgaac tagaaattgg
     2041 ttctttgatt attcatccgg atgcatatgt ggcttctaaa cgtggagaaa caatcgaact
     2101 aacacatcgt gaattcgaat tactacatta tttagcaaaa catatgggac aagtcatgac
     2161 acgtgaacat ttacttcaaa ccgtttgggg ctatgactac ttcggcgatg ttcgtacggt
     2221 ggatgttacc gttcgtcgtt tacgtgagaa aattgaagat aacccaagtc acccagcatg
     2281 gttagtaact agacgcggag ttggctatta tttacgcaat ccagaacaag aataaataac
     2341 aagaagtggt cgccgaagtg aaaaaaattc ggtgaccact ttttttgggt attttcgctt
     2401 acttaggtac tatttttata aataaatcga cccaattaac aggaaaaaca atacgtctac
     2461 accataacat atggtatact aatttaaata tattaccccg aataggagta gaaagactta
     2521 tgcataaaat gagatttttt cagtccgtac aatttaagtt agttattatg tatttgctac
     2581 taattatcgt tgcaatgcaa gtaatcggcg cgtattttgt acgtgagctg gaagggcaac
     2641 tggagaaaaa ttttcaagat tctattacga atagtattac gcttttagat tataacgcta
     2701 gagaagaaat tattaaaaat agcgacaact ccgtcaagtt acaaaatgat attagagaac
     2761 tcttagtcga ttattctcgc gcaagtagca atttaatcga agtaagaatt gtagatgaca
     2821 aaggaaaaat tctcggcaca tctaatttaa ataaccaagg aattgttgga caaaaaagca
     2881 acgatccact tgtaaaacga acattatcac ttggaacgac ttctgaggac aaaatctata
     2941 aagacgaatc gaataaaaat aaccgcgttt gggtgaacgt atcctccatc aaaaataaag
     3001 gccaagtgat aggggctatt tatcttgtcg ccgatatcga aagtgtctat aaacaagttg
     3061 atgatattac aaacattttc atcacaggga ctttgattgc gatgattatt acagccgtcc
     3121 ttggaattct attatcaaga accattacta aaccaattat cgaaatgaaa cgtcaagctt
     3181 atgcgatggc tcgcggcaac tatagccgca aagttaaagt atacggtgtc gatgaaattg
     3241 gtgaactggc tgattctttt aatacactaa caaaacgagt ccaagaagcc caagcaatga
     3301 ctgaagggga gcgacgcaag ttatcctctg tactcgcata tatgactgat ggcgtaattg
     3361 caacagaccg tcgcgggaaa gtaattctca ttaatacgcc agcagaaaaa atgcttcgcg
     3421 tgaaacatga aagtgcgaat gggcgctcga ttattgatgt tttagacatc ggagacacgt
     3481 accaatttga agatttaatg gaagtagatg ggtcactaac aatggaccgt agtactctcg
     3541 acaaaccgta cgtgcttcgt gccaatttct cggtcattca aagggaaaca ggctttaata
     3601 atggggttat cgcggtactt cacgatatta ccgatcaaga aaaagtcgac caagaacgtc
     3661 gcgatttcgt atccaatgta tcacatgaac taagaacccc acttaccagt atgcatagct
     3721 atttagaagc attaagcgac ggcgcgtggg aagataaaga aatcgctcca cgtttccttg
     3781 aagtaacgca aaatgagacc gaacgaatga ttcgtctcgt taacgatctc ctcaaacttt
     3841 ccagaatgga tggcggcaga gaacaactcg aaaaaagctt cgtgaacttt acggatttct
     3901 ttaaccatat tattgaccgt tttgaaatga tgaaaaaaga aacaatcatg ttcaaacgcc
     3961 atattccaag agagccagtc atcatcgaaa ttgatgaaga taaagtaatg caagtgcttg
     4021 ataatattat ttctaacgcc aataaatatt caccggatgg tggccgtatt tccttctatc
     4081 tgaaaaaatt tgaagatgaa attgaagtaa gcattgccga tgaaggttta ggcgtaccag
     4141 acgaggattt agcaaatgtg ttcgaccgat tcttccgtgt agacaaagca cgctcgcgag
     4201 aaatgggagg aacagggtta ggactcgcta ttgctcgaga agttatcgaa gcacatggtg
     4261 gtcgaatttg ggccgaacgt aataaaacca aaggaaccat aattaaattt accctgccat
     4321 acagtgactt accggaggat gattgggaat gatgaaaaaa acaggatttc gctcatttat
     4381 actaaccatt ttagtcgtac tcagtattgt cctaagctac tttatttgga agggacaacc
     4441 tgattacgaa gcaattaacg taaaagaagt ggaaaaaaca accattgaca agacaatgac
     4501 aacatcgcaa gtattcaaac catacaagct ggctgtaaat gcaaatgaaa ataattacca
     4561 aagtttagat gctgatttat taaacgaact aatggcacaa ggtaaagcct ttagtttctc
     4621 ggaagtagta ttagctagta aaaaaagtag tgaagactat gagaaattaa tccataaaaa
     4681 cggaactatc gagattattt tccccaataa tattccgttc tctatctttg ctcaaatttt
     4741 tcaagtagaa ggggaagggc ttgagtcagc gttctttaat cgaattgttt ttgatattaa
     4801 caaaacggat actgggctac attcggttta tttcacaaat gacgatcaag aaaatattta
     4861 ccaaagttct ttgcaaaata aagacattga taaaatcgaa aaaattgtta aaaagaacga
     4921 aagcaagctg actcaaaatg ataagctaat ttcaaacaaa cgcaatcttt ttctaagctc
     4981 tgaaaaaacg aaactaaatc gcaaaaaata tatcatcgat tcgcttgaaa ttaatttatt
     5041 cacgtccgca ctattccaag attctggtac tgttaaaagt gaaggaaaca catacacaga
     5101 tggttcaagt gtcattgaaa tggatacaga taataaagta ttagagtatg taaatccatc
     5161 acaagaacgt actaatccag aagatctcag tagtgtcaaa cgagctggac ttattcaaga
     5221 tagttttaac tttgtgaacg accatgctgg ctggactggc gacggcgctt actatttcac
     5281 aggttatgcc gcggaaagtg cgacgactaa tttcagttta ttcatcgata atttacaagt
     5341 atacaatgag aatggcatgg cggatatttc tgtaacagaa ggacttgaag ctgtttataa
     5401 atacatgaga ccatttttcc gcttagatac agatgttccc ggagagaaaa aagaagttac
     5461 gttaccatcc tcttattctg tctatagtgc tcttgcccaa aatcctaacg tcaaagcaga
     5521 agaaattgaa gatattgttc ctggctatca tatgactaga agcgaatctt cgggcatgaa
     5581 tcgtcttgta acattagagc cgacgtggtt gtataagtat catgacaaat ggttcatctt
     5641 ccaaccagac gcagaaaagg cgggtgaata aaaatggatt ggcgtaaaac acaaatgatt
     5701 tttattgtga ctctcctcat tcttaatgtt tttttagcgg taatattttt caacaagcag
     5761 ttatcagatg acccagatac actcggaaat gaaacgctag aagaacgatt aaaagcagat
     5821 aatatctctc atcctgattt atcgaccaaa cctactagcg gctctatttt cactacagag
     5881 cgagcagctt ttacaacaaa agatgtgagc gatcttacag ggcaagccat tacgcttaaa
     5941 gataacaata aacaaatcta ttctgtctta caaactcccg taaaagctgg caaaaaaggt
     6001 agtaacccag aatttcaaaa atttatggaa tcagatgttt atcgcgggga atcctatcaa
     6061 ttttggaatt atgacaaaga tgctcggacc ctcactttta atcaattaat taataataat
     6121 atggttttat ttgatgaagc gggccaaatt actttttatt tagatcaaga tgaccgagtg
     6181 atctcatacg agcaaacttg gatgtctaag caagatgatt taaaagataa aaccaattta
     6241 atgtccgcaa cagatgcatt agaagcggtt tatcagcacg gagaattgaa gcaagacagc
     6301 gacgtggttt ctgcaacatt tggctattac acgacagtac agctaccctc tggaaatgta
     6361 tacttccccg tttggtgttt tgaagtaaaa cattctggtg aaactaatta tgtcctcgta
     6421 aatgccaaag acgaacaagt aattaatcaa tcagacaaca aatcaaccac cgagccaggt
     6481 acagaattat cgagccgtca gaaaaccaaa taaaaaatga gtcaacctaa ttatcatgaa
     6541 aaattaggtt ggctttttca aacgataggg catgcaattt tgccgaatta gcgttacaat
     6601 gaaagatata taagccttta gggggataaa aaatgttcgc aaataaaatt ttaacggaaa
     6661 aagatacgga tcaaatccga tttagtatat tagccagtgg aagctcaggg aatgccacac
     6721 ttgtcgaaac aggagaccaa aaaattctga tcgattgtgg tttgagtgga aagaaaatgg
     6781 aaggattatt cgcgcaagtt ggtcgtgata tgaacgattt agacgcgatt ctaattactc
     6841 atgaacattc agatcatatt aaaggtcttg gtgtgcttgc tcggaaatac aaactcccta
     6901 tttatgctaa cgcgaaaacg tggaaagcaa tggataatat gattggcgaa gtgtcttcag
     6961 atcaaaaatt ccaatttgat atggaaacag taaaaacctt tggtagcatg caagtggaat
     7021 cctttggagt ctctcatgat gcaattgagc cgatgtttta catatttcat aaagggaata
     7081 aaaaatttgt aatgataacg gacactggtt atgtaagcga ccgaatgaaa ggtcatattg
     7141 cgggggctga tgcttatctt tttgaaagta atcatgatgt agaaatgctt cgaatgggac
     7201 gctatccgtg gaatgtaaaa cgcagaattc ttggtgacga gggacacgtg agcaatgagg
     7261 acgctgcaat agcaatgagc gaagtcatta ccgatcaaac aaaacgaatt tatttgggac
     7321 accttagtaa agacaacaat atgaaagaac ttgcgagaat gagcgtaaca caaacactta
     7381 tggcagaagg tattgatgtt gggggtaaac tagaaatttt tgacacagac cctgataatg
     7441 ctacatctat ctttactatt taagtttcac cgttttttta aagctttttc atcgtttttt
     7501 catatttggg gtttattatg gaagtatata aatgcgaaat ttgcagagag gaaggaagac
     7561 atggacgaga aagaaaagaa tttaaatgaa aacagcgaga atgaaagcac gccaaaaaga
     7621 gaggtcgagg atactttaca tacaccggag agcgcgcaac cagtccaaga aactcctatt
     7681 gtagaaggcg tgaccccaga aggggagaaa tttgccggag cgacagaaga tgcagccgag
     7741 gcgagttcta caaatgcatt ttttgaagaa gcaagtaata aagaaccaga acctgctaga
     7801 ccggctccag ggccaagacg cgctggtaca actggtggcg gggcagttcc acctaataga
     7861 gtgaataatg gcggaagtgg taacgggaat ggtgaaccac cgaaacgcgg caaacacttt
     7921 atcggttact ttttaacagc acttattggt gttattatcg gaggacttat tattttcttt
     7981 gtcgcttggg ataatggtga caatgcagat acaacttcaa actcaaataa taaagctacc
     8041 aaagtagaaa aagtttcagt agatacaaca tcagatgtaa caaaagcagt agacaaagta
     8101 caagatgcgg tagtgagtgt tctaaattac caatcatctt catcccttga tggaacaacg
     8161 acttctgaac aagaagcttc ctcaggatct ggtgttattt ataaaaaggc aaatggaaaa
     8221 gcctacatcg taacaaataa tcacgttgtt gctgatgcaa ataaattaga agtaactttt
     8281 acaaacggta aaaaatccga agcaaaatta ctagggacag acgaatggaa cgatttagct
     8341 gttcttgaaa ttgatgataa aaatgttact acagtcgctg cattcggcga ttcagattca
     8401 ttaaaacttg gtgaaccagc aattgcaatt ggtagcccgc taggaacaga attttccggt
     8461 tctgtaacac aaggtattat ttctggtcta aaccgtgcag taccagttga tacaaatggc
     8521 gacggaacag aagactggga agcagatgtt atccaaacag atgcagcaat taaccctggt
     8581 aacagtggtg gagctttaat taatattgaa ggccaagtaa ttggtattaa ctcaatgaaa
     8641 atttcgatgg aaaatgtaga aggtattagc tttgcaattc caagtaacac agtagaacca
     8701 atcatcgaac aactagaaac aaaaggcgaa gtagaacgtc catctctagg tgtatccttg
     8761 cgtgatgttg atactattcc agaaacacaa caaaaaaata tcttgaaatt acctgatagc
     8821 gtagattacg gcgcaatggt acaacaagta gtatccggtt ctgcagcaga caaagcaggc
     8881 ttgaaacaat acgatgttat tgttgaacta aacggccaaa aagtaacaaa ctccatgaca
     8941 ttacgcaaaa ttctatacgg taacgacgtg aaaattggcg ataaagtcaa agtgaaatac
     9001 tatcgtgacg gtaaagaaaa atccacagat attaaattag aagcagcaaa aacaactaca
     9061 tgataacaaa aagccattct cttgaaaaag agggtggctt tttttctgtg gaaaacttgt
     9121 ggatagcgat ttttttcgga tatagatatg gtagagaaca agaattctcc tactaaatat
     9181 agaactggtt tgtggatatg tggataactt ctgtggataa cctgtgtgta agcagtgaat
     9241 atcttgtgga aaagaacaat tttgataatt taatcaataa acacagattt atttttgaaa
     9301 aaaacacatt ttttgcgaaa atataggtca aaaaagaaaa atgtggatag aaagccattt
     9361 atccacattt ttacttttta taagctggat atgtgacaag gaaaataact ttacatagag
     9421 atttgattcg cgagattgat tgtaggagaa ggggttccac tgtttggtgg agtttgagtt
     9481 ttgaatagtt aggcgacaat ttcacctgtg gataagctgt ggatagtgaa atttggctat
     9541 catatatatt gtggagaata tacgttcgga cacaaaatag agaaggggct tgtggatatg
     9601 tggataattt ttggggataa cttgtgtata agggcgggat aacctgtgga ataacttttt
     9661 atggaaagct gctcttattt tattttgact agtgcaatga gggatttttg atgtatgata
     9721 aaagtattaa aaaagataag ggtggcataa atgaatattc aaattgtaac ggtcgggaaa
     9781 ttaaaagaaa aatatttagt gcaaggaatc gccgaatatt taaaacgact tagcgccttt
     9841 gcgaaagtga cgatcgttga agttccggat gagaaagctc cggaagtgct gagtgatgcc
     9901 gaaatgaagc aagtaaaaga taaagagggt gcgcggattt tagcaaagat tccggacgat
     9961 gcccatgtta ttgcgctggc gattgatggg aaaatgaagt cgagtgaaga atttgcggcg
    10021 gatttggata agctggcgac ttatggtaag agtaaggtga cgtttgtgat tggtggatcg
    10081 ctgggactta gtgaggcggt gttgaagcgg agtaatgagc ggatttcgtt tgggaggtta
    10141 acgctgccac accagttgat gagattggtg ctggtggagc aggtttaccg ggcgtttcga
    10201 attgttcggg gggagcctta tcataaatag ctagctggtt gaaagggttg taatcaacaa
    10261 cttaactttt gaatgctggt ttactttttt cgataagcca tttttcacca tttgaaattg
    10321 tatgatctgc atgataaatt aatgtttttc gaagtgatgc gtattctgtg ggtaatgttt
    10381 catagtttag aaaatgatag tttagtgcga tgctttcagg aataattcca ataccaagtt
    10441 cattattgca gatttcaaca agtgtttcgg gaatattgat ctctgatatg gaaacatttg
    10501 ggatattaat atcgttaatg agagcagcca gggcgcggta tgaataacat tgtttgctga
    10561 agacgtataa tcgttcttcc gctaatattt tttggactga ttttccagct gtgttgcctg
    10621 cgaaaactag tttatcccat gagagcgttt gtgagatgat ttggctatct tgaaataaat
    10681 tttctttttc gagttcagcg acatatgcga tggttagttc tctgttagct atttttggta
    10741 ttaattcact tgtacttccg ctaacgatag ataatttttt atttggaaac tgttgataga
    10801 actctttaat gattgtgtta aattccatag gcaaagaaga ttgcgtaata ccgattgaga
    10861 tcgtttcttc ttcattattg ataatatcaa tcgtttcctc ccataataaa atcatttttt
    10921 tgaattgttg atagattttt tcgccctctt tagttggttc cacaccattc gagtgccgga
    10981 agaaaagttg agtttggaac tgtttttcga tattttttat tttattggac atattagact
    11041 gtaaatgatg cagttcattc gctgctgcag aaatactctt tagttcagct actttattaa
    11101 atgctttcat gttttcaata tccataattt tctccttttg gtatcaaaaa taatgatacc
    11161 ggcatatgat tttcgcattt caaatgatag cgcagataga ttatacttta tttacaatat
    11221 aaattcaatt tgggggttat gttatgaata caaccattca acaattggtt aaacatgttt
    11281 cagtaagaga atttaaaaat gaaagattat cagatgaaat caaacaacat ttattaacag
    11341 ctgcgagaag tgcatctagt tcgcattttg tgcaatcttt ttctatttta gaaatcacag
    11401 atgaaaaact aagaaaggaa ctagctgaaa ttacaaatag tgcttcttat gtaaatcaaa
    11461 cggggacctt ttatgtgttt gtaggggatt tataccgaca atcaaaactt ttactggaga
    11521 ataatagaac tttagatggg ttgagaaata tggaatcatt actcgtctcg gtgatagatg
    11581 ctacaattgc agctcaaaat atggttattg ctgctgagtc tcttgattta ggaatctgtt
    11641 atatcggtgg aataagaaat gatattgaaa aagtagctga attgctaaac ttaccaccat
    11701 ttacgatacc tgttttcgga ttaactgtag gcgttccaga atataaaaat caagtaaaac
    11761 cacggctatt actagaaaat caagtaggag aaaatcaata tccacatgaa caatttacgg
    11821 atttaaaagc gtatgaggaa ttgaccaaag attattatgc tttacgtgaa aaaaatcagc
    11881 atcaaacttc atggggagac aagaatgtag cgttttttga agaaatacga agaccagaaa
    11941 tagctggctt tttgaaaaaa caagggttta cattggatta attaattttc gttgtagggc
    12001 gtataaaaaa taatagtatt aaatttatga gaggctggaa gagtattttt tccggctttt
    12061 tatttgattg gggctattat tttgtcatag aaagcttaaa ctagattaga tggggataga
    12121 tttgtataat taatatggag ttaaaattac actaatatat ccaaaataaa tttcataaaa
    12181 ggaggatcca aatgaaattt ctaaaaaaat acggctttta ctttttatta ctcggcgttt
    12241 tgagtgattt tctaacgcct tacatacttg gaatttttta cccagaatta aatcaaatga
    12301 cgcgggttat gagtgtgttt ggggatgtgg ctagtccggt gcggggagcg tttttggttt
    12361 ggtcggtggt gtctggggtg ttttttgtgc tcgctttgcc ggcgatttat cagagcgttg
    12421 ttaaaacttc gcggactttg gcgattttgc ttgcttctgc gattggtttg tatgggattg
    12481 gcgattgtat ttttaccggg ttgtttagta ttgacacgga gcaggcgagt tggacatttt
    12541 cgacttgggt gcataatatt ggctcggggc tcggttatgc gggatttttg atttttccgt
    12601 tgtttctggt cattctttac cggaaaactg gcgataaaac ccgcagcaat atctatctag
    12661 ttttactcat tgttagtttg ctgtcggctg gtgtttatgg gcttgcgcgg attcctgctg
    12721 tgaatgactt gccggtttta gataaaattg gtttttgtca gcggattagt ttctttttta
    12781 attacttacc gattgttgtt tttggaattg atcggattag aaaaccctag attttcagga
    12841 atctagggtt ttttgttcgc aaagttcgat aaattgctgg aagtcttctt gttttgctag
    12901 ttttttgacg aagctgcgtt cgtttaagat ggttacgagt tggccgaata attcttcaaa
    12961 agagttgtcg cgttcttctt tcatagtgag taataggacg agtttgacgc gatttcctcc
    13021 ccagtcgatt ggtttatcaa gtgcgcatac ggcgacggca tttttcttcg cgcttcgctg
    13081 gatggcgtgc gggatggcgt agtagttgcc gtaacaggtg ctagataatt gttcgcgctc
    13141 aaacactttt gaaacatagt cggagtcgca gtagtcgaat gcagttaact gttcgcaaag
    13201 aaacgtaatt acttcttctt ttgatttgaa gttttgtttt gggaagaaca gctctttttt
    13261 gaaaaatttt ctggaaatcg aatcggcttt gggcttagtt tctaaaatgt gcttgatttt
    13321 ctgcaaatct gtttctgtta aaagtaaatc gtaatgatag actgggatgt cagttgttag
    13381 gtttaatggt tcggcggtga taattaaatg gatttctttg tctaaggtga actgctttat
    13441 atcaaaaata gattgagaaa cgagcaagtc aatcgaaaaa tcggcaattt tcttaagttg
    13501 attatgaatt aaacgttggc tacctgcgcc gtacggtgaa accaagagga tttttctttt
    13561 tttaccgtga ttaatcgttt ccgaagcgga taaaaaatgt agcgcgatat aagcgatttc
    13621 gtcatctggg aaagtgatcg caagctcttt ttgaataaag gcagaggcat aaacactgac
    13681 attataaata aatgggaact tgttttttaa ttcttcagtg agtgggttgg ttaaatattg
    13741 tttgtgattg gctcttttat aaagggctga aatgtgagcc actagatagg tggctatttt
    13801 ttcgtcagct gaaaagtcaa tatggaaatt ttggtccact gcttcaagga gccgagtgac
    13861 aacgctgcca aaaacttgtg cgtcaatggt tgaagttgtc gttagtttgc cggaataaag
    13921 ccgggcgata tagcttagtt cttgggttgg aatatcgatg tgcagttctt cttctaacgt
    13981 ttcggttagg tgctccgcca tttcaaggct agttttatct tgctcgagta aagcggttcg
    14041 ctctatatag ctgcccatac taatgcgctc aattaaaacg gcgatatgca agatgaacga
    14101 aatcgttgag aaatcattca taaaaaaatc gttctttttg tggtaggcaa taataagctc
    14161 ggaaagttgc tttagattgc aataatcaaa gtaatcggcg tatttatcta ggcttaattg
    14221 atggttttcg atttcctgat tgaggaatag attgaagatg cggcgctttt cttcttcgcc
    14281 gccctcggtt agtagttcgt tgttttttcg aataatacat agcgactcat ctttttcagc
    14341 gataaccgcg ttgagctctt taataatacg agataacgtc gattcgctaa tgaaaaattg
    14401 gtccgctaag tcatagaaat tagtatgatc ttgttcgata aaatggcgta ataattcaaa
    14461 atgtagattt tcgttatttt tggttagatt catttgtgaa agctgctcgt ttggtgttag
    14521 aaagtagcct tttccagctt ttgatgcgat gattgtggaa ctaaatgact ggttaatttg
    14581 cacaatgtca tttcgcacag ttttggaaga aacgcctaac atttctgaaa gtgcttttgc
    14641 tgttactgtc ttttggctgt cgttaagctt ttctaacaat gaacgttgcc tttctgaaat
    14701 agtcattata tcccccctaa ttctccctta acctattgtt attatacaac accaaataga
    14761 gaaagagacg agtttttttg tcccaatctc tatttaagtg gctattaatt agcagcgatg
    14821 ttttcttctt cggcttcttt ttctaaagcg acaaggtttt tctcatacac ttttaggaat
    14881 gggtagtaca ttaggccgtt taagaaaatc aggatgaata cgagaacgat ggctcgccag
    14941 tccatggtgg atagaaatgc tccaattggt gcgggcattt gccaggagaa gacggcgaac
    15001 gtttttccga caatcccgaa atacatacaa agatacgtga tgacaccatt gaatacggat
    15061 gtgaaaatga acgggaagaa gaaaatcgga ttcagcatta gtggtgttcc gaaaattagc
    15121 ggctcagaaa ttccgaatat ggaaggtaag aagccgactt tcccgacggt gcttagttgt
    15181 ttggacttgg atcgcatcat taaaaaggca agtgcgagaa cggaaccaga accaccgatg
    15241 ataacgaaat atgtccagaa tggtgtcgtg aaaatattcg tcaaatcttg accagccatt
    15301 ttttcagcgg cgttgattga aaggtttccg tcacgaattg ggcctagaat tccggcaagt
    15361 gcggcatcgt ggacaccgaa gaaccagaat aagtgaacta ggaaaatact tagaatcgtg
    15421 aatggtaagc tatcggctgc tttgaagctc ggcgccattt tttcatataa gaattggatg
    15481 gcagttgtgt ctagtaggtt gaaaatgata aagataatcg agaaaaaggt cattaaaata
    15541 ataccaggaa ctaaggctgc gaatgtctcg gatagtgagg ctggaacgct atcgggcatg
    15601 gttattcgac cgacattttt cttgcgcatc cagtgataac cttctacggt aacgatggcg
    15661 acgaaaatcg agagtaatat tccgcgtcca tcaaggaaac taatgtcgac ttctttgccg
    15721 tcccaaccca ttttgattgg gttaagtacg agcataaaga aaccggcgat agaaaacatg
    15781 agtgggcgta agaaatcttc gtggtagtgt ttgcataaat aatacgtgat accgacgcaa
    15841 atatataacg acatggcgcc aagtgtgatt ccgctaatcc aatttaggat taaatcatat
    15901 ttttcagcaa agttagccca agcaagcagg aaaccatttt tcgtatcatc tgtgactgga
    15961 gccgctttca aaataatcgg aattgaacca aacaatgtaa ttggcagcat ggacataaag
    16021 gcatctctgg ttgctttcaa atggcgttgc tggctaagtt tgttagccag cggggaaata
    16081 tattgatcca ttttttcgct aatggtatta aatcgcatgt ttttatcctc ctattaattt
    16141 ctggatgtct tcgtaaaccc ctttgccatc catgatgccg tattttacgg gtgaaatggc
    16201 atggactggg acgctgacgg cctgtttaat ttgtggcata aggaaacgga tttgaggccc
    16261 gataagaacg aggtcgaaac cgtccaaata atcggtatac tcggattcgc tataagcagt
    16321 gacgtttaat gtgttgccag aagcggcttc tatttttttc gcaagcattc ctgtagacat
    16381 accagcatta caaactaaca tgatattttt cattttcctg ctcctttttt taaaattctc
    16441 ttcgtttgat gagttttccc tgactttcaa tcatttcttt gaaccagtag taggaagctt
    16501 ttggttttct gatttggttg tttttgaaat caactgctac aagtccgtaa cgcttttcga
    16561 caccattttt ccaagagtaa aggtcgaacg gggaccaagc gtagtagccg cgaacgtcac
    16621 aaccagcatc gattgcgttg aaaatggcgt taatatggtc gttcataaag gcgattcggt
    16681 aggcatcatc tacttttgcc actgaaacat cttcgcgaac accaatgccg ttttctgtca
    16741 cataaagtgg taattgatag cgttcgtaag cctcgattaa gccatcttgt aagccttttg
    16801 gataaatttc tgtgtcccat tcggttgttt cgttggcggg atctttcact tgttcgaacc
    16861 agtttttgat gagaacttta ctttcgcctt ttttaccgct gtggttgaat tgtagttggg
    16921 tttcgccgcc agtgtatggt ttaacgagcg tgcgcgaata gtaatttaag ccgatgaagt
    16981 cgacagtgtt ttgtttaatt gtttgtagtt cgtctgtttt cataaagctg atgtcgtgcg
    17041 attttgctag ttcggcaatg aggtcgaccg ggaattcgcc aagtgcggct gtgtcgagaa
    17101 tccagttgtt gcaatagtta tcagcgtagc gcatcgcgat tttcgtttcg atactttcat
    17161 cgacaccgtt caccggcgtg tagctgtgaa caataccaat ttgccctggg tagccacctt
    17221 ctttaaaagc cttcacgcct aaagcactcg cgtacattac attataagcg gcaatcatcg
    17281 ttttttgcgt atcttgataa ccgggcgggt agttgccgat tttatatccg ttagcaacaa
    17341 accatttcgg ctcgttaaac gtagtccaat tcgtgatttt atcgccaaaa tggtcataac
    17401 aaaccttggc ataatgctca aatgcggcgc aaacatcgtg atccaaccag ccaccagttt
    17461 cttcccaata ttgcggcaaa tcccaatgat aaagtgtcac aaacggctca atatcatatt
    17521 ttttacacgt atctagcaag ttttggtaaa attcgatccc ttttaagttg atgtcacctt
    17581 gcctattttt aataatccgc ggccaagata aggaaaaacg ataggaattt tgcccgcctt
    17641 ctttcatcat ccgaatgtct tcctcgtagc ggtggtagtg atcgctcgcc acatcgccat
    17701 tctcaagacc cgcttcgtgc aagtagtagt cccacatcga ttccgccttg ccatccacat
    17761 cccaagcacc ttcacattga taagaggccg ttgcacctcc ccataaaaag ttattattca
    17821 ttagataaac tccatttcca ttgataaatt tctcccagtt cccgaatcat ttccacggca
    17881 atatccgtag aagacaagtg accctccgca tgaacaagca gtaaatccac ctctctcatt
    17941 cggttctctg aagatagttt tcgtaaaagt tccgcgtgcg ctcggtgcgc cagtttaatc
    18001 tcatctttcg cttcagtaat tttctgcgtg aaagcttcga tgttttgcag ttttacttct
    18061 ttcagtgcct caaaagcaca acttttcgca ttcccggcgt gtaagatgat cgccatggaa
    18121 tccagttctg ttgttagttc gttgctatct gtcacgtaaa gacctccttt tgatttgtct
    18181 ttactatagc tggaaaaatg ggggaggtga aattattatt tgccactttg gaagtggaaa
    18241 ttggtttagg tttggaaatt attgattact aggatatgat gatagttaga gagaaaatat
    18301 gacataggag atgaataaat gatgaaaaaa acagtacacg ggtgggaaat aatatctaat
    18361 ttagacatac gattatacca agatgaagct ggtggggttg tgattttact agataaagat
    18421 ggttttggtg atcaagtgcc agtgctattg aattttgatg atgatggagt agatataaaa
    18481 gctctttcgc atttaacaaa aagtgttcga gttttgctgg ataagaaggt gcggattgaa
    18541 tggcatgatg agtattttga agagagaacg caagcaatgg agtacatcga ggtggaacgg
    18601 gattaaccgt taattatata caaaaaaagg agagcaacaa gatgagcaaa aagttagtaa
    18661 gtattatttt cttagggatt tgtcttttgt tagttggttg tggtaaagag gttgttgata
    18721 gtaagtatac cggaaaatgg aagttggaat cgtcggggat tggtatgagc gatggatcaa
    18781 attacaagga aacggatgca gcgggtaaag ttagtcttga cttggacatt gatgcagagg
    18841 gaaatgtaaa agaattgtat attgatgatg cagttgctat aactaattct tataaattaa
    18901 agaaaaaagg tgacgatgaa tatc
//
LOCUS       DASDYK010000046        18668 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.046, whole genome shotgun sequence.
ACCESSION   DASDYK010000046 DASDYK010000000
VERSION     DASDYK010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 18668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18668
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.046"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            132..1535
                     /locus_tag="U0308_001583"
     CDS             132..1535
                     /locus_tag="U0308_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose/L-arabinose isomerase family protein"
                     /protein_id="HEM2316550.1"
                     /translation="MEAVKIGFAPTRRSIFSAPDAVKYANLTRDKLNELNIEFVDIAE
                     FNEDGLLYDDADMMKIAAKFKKAGIQGLFLPHTNFGTEYVCARLAKELDVPVLLWGPR
                     DERPDENGVRLRDTQCGLFATGKILRRFQVPFTYMTNCRLSDPEFERGIRDFIAVCNT
                     VKTFQNMRILQIGPRPFDFWTTMCNEGELLEKFNIQLAPIPLPELIKEIRSVSSEQIE
                     EVDGTVEYCHGCAIVKIKEVDLRMVAALKVAMKNLATKYGCSAIAIQCWTALQDEIGI
                     MPCAANAMLIDEGIPVVCETDIHGAISCLLIEAANLGRNKSFFADWTVRHPDNENGEL
                     LQHCGLFPFSVAKDKPAIGYPLAFDSPGAVEAEAKGGELTLCRFDGDNGEYSLLLGKA
                     RGIEGPYTKGTYLWIEVDNLKRLEEKIVSGPYIHHVSGIHADVVPILYEACKYIGIKP
                     DLYDPIEEDIKAYLRGE"
     gene            1550..2374
                     /locus_tag="U0308_001584"
     CDS             1550..2374
                     /locus_tag="U0308_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEM2316551.1"
                     /translation="MSELKLKSFEIRKDVLKMIYDAKTGHTGSDLSCADILVALYYGV
                     LNVNPENPEALDRDRYVQSKGHAVEVLWAVLADKGFFAKEELADFSAFGSRLIGHPNN
                     KVAGIEMNTGSLGHGLSVSVGMALAAKMDGKSYHTYTLMGDGELAEGSVWEGAMAAAN
                     YKLDNLTAIIDRNSLQISGRTEDVMSVEPLADKWRAFGWDVIEVDGNDPDKLQAIFKT
                     VNVTGKPRLIIAKTIKGYGVKIAENAAKWHHYVPSSEEYEIAMKDLEERMEACRHE"
     gene            2367..3314
                     /locus_tag="U0308_001585"
     CDS             2367..3314
                     /locus_tag="U0308_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase family protein"
                     /protein_id="HEM2316552.1"
                     /translation="MNKIANRQVMCEVLMKEATRNDSNLVVLTSDSRGSASLGAFAEK
                     FPERLVETGIAEQNIVGIAAGLAHSGKRAFVASPACFLSMRSIEQVKVDVAYSDTNVK
                     LIGISGGVSYGALGMSHHSLQDIAVTRAIPNLEVILPADRLETEAVFDYLLQSNRPAY
                     VRLGRNAVEDCYAEKPVFQIGKAGTLRKGNDVSILATGEMVRVALDAREELKLKGISA
                     RVLNFSTIKPFDQGAVEAALAETKLLISIEEHSIYGGLGAAVSEVVSSSPTSIRHLIL
                     GIPDEPAIAGTSQEIFDYYGLSATGIVATVMKNLGDERR"
     gene            3311..4774
                     /locus_tag="U0308_001586"
     CDS             3311..4774
                     /locus_tag="U0308_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase"
                     /protein_id="HEM2316553.1"
                     /translation="MKKHYQIAIDQSTSGTKVLLFKVGELVDRLDKKHRQLYPKKGWV
                     EHNPIEICQNVRTLIADILAKHDLIPADIERLALTNQRETIVAWDKQTGKPLYNAIVW
                     QCNRTKELCETLKKAGYEKRIKQLTGLKIDSYFSASKMKWLLENSSAVRDAASRNQLA
                     FGTMDAWLLFSLTDDSNYFTDRTNASRTLLYDIEKNDWSDELLELFGVKRAYLPEVKQ
                     SAGSFGSYQEIPIHSVMADSEAALYGQGCDAFGAVKATLGTGCSVMMQIGENRLPEND
                     AILTTLAWDVAGVNQFALEGIIRSCGDTLVFLSEQLELFNDYDTACKRAFQLPCNEGV
                     VLIPGQLGLGSPYWNTDIRAEILGLTREHTKWHIIRAGFTSIAFQIKAVIDQMELMTG
                     QNIKRLQVDGGLTKQHELMQYLADVLKAEVAVSPAEELSAIGAIEIADNKLQNKRTIA
                     KLYQPNITHTHALEDFQEWEKQVKSSILKLQKVRNFK"
     gene            4771..6627
                     /locus_tag="U0308_001587"
     CDS             4771..6627
                     /locus_tag="U0308_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS beta-glucoside transporter subunit IIBCA"
                     /protein_id="HEM2316554.1"
                     /translation="MNNSDLAKEVVKLVGGKENILSVIHCVTRLRFKLRDENLAETEK
                     IKALKGVMTVVKSGGQYQVVIGDHVSYVYDEVIRVLGIKPDDAPQDNPEQEHKSIFNK
                     FVELISGIFMPVLGLLAASGILKGFLTAAVTMGLINTSAGVYEVLYAASDALFYFMPI
                     ILGFSAGKVFKTNQYLSAAVGAALVYPTLVDMYSSGAHLTFLHIPVILMNYTMSVIPV
                     ILAIYFMSKLEKVLVKFIPKSLQLIFVPLLLLLIVVPVSLIIIGPVSTYASQLLAKGA
                     LGLYSLSPMIAGFFLAGIWQVAVMFGLHWAFIPIFINNISVLGYDPINAMLYCTVFAQ
                     TGAVLAVMLKTRNQELRSLSITATISGFLGITEPAIYGVNLPYKKPFIMACVGSAFGG
                     AIAGMSAAKMFGGFASGGIFGIPMFINPDGIGWDFWGFLISLVVAFSVALILTYFFGF
                     KDKVEEVVIQTGEKATLDETIYSPLQGEIIALNDVKDEVFSAGIMGAGVAILPASGEI
                     RAPFDGTVLSVFQTKHAIGLISKQGVELLIHVGLDTVNLNGQFFDIEVSESEEIKKGD
                     LLGRFELDAIKKAGYDITTPIIVTNSATLADVITVNLGKSVDNNQKILEAKA"
     gene            6647..7912
                     /locus_tag="U0308_001588"
     CDS             6647..7912
                     /locus_tag="U0308_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4038 domain-containing protein"
                     /protein_id="HEM2316555.1"
                     /translation="MLKQSADKRRIEKNDKPFFYLADTVWSAFTNIDLTDWAYYLKVR
                     KEQGFNVLQINILPQWDRSILKKMQEPFGISEGFFDLKAKNEAYFKHAEKMLEMAVNQ
                     GFTPALVLLWCNYIPETWGAKFGTSPLFRKEDIKPYTEMMLEHFEQFEPIYIISGDTD
                     FPTETVAAYYLEALETVSKKAPHALKVLHICGRLKDIPENLQTHPALDLYFYQSGHNS
                     EHQSMAYTLAEHFSQLEPIKPVINSEPCYELMGYSRQKYGRFSREDVRKAAWQSVLSG
                     AIAGISYGAHGIWSWHEEGSTFGSALGEGFVSPFNWRQALHFEGATDYAFLKSFILAN
                     DLTTLAPINLVLNQTPEIRAAETEKVVIIYVPSNVPIYLKGQFASLDDYAIDLEQGKK
                     VSLTKILHEEKTEIQMTPFLKDSLYVIHK"
     gene            complement(7973..8776)
                     /locus_tag="U0308_001589"
     CDS             complement(7973..8776)
                     /locus_tag="U0308_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF817 domain-containing protein"
                     /protein_id="HEM2316556.1"
                     /translation="MQFFRLLWVFTWKQALCCIFPGIIFISLALTKLIDIPFIARYDL
                     LLIICLGTQVLLIKFGLETWDELKVIMVFHLIGLGLEIYKVHMGSWSYPEPGLMKLFG
                     VPLYSGFMYSSVASYICQAWKRFDLKMTNWPNIWLVSSLCITIYANFFTHHFIMDFRW
                     ILIVLVLVLFRKTYVYFKVSSTQLKMPLSFSFLCIAFFIYLAENIASFYGAWSYPDQL
                     IAWRPVHVSKITSWYLLVIISIIIVAQLKFVKQKLEQTSVKAKSEATLK"
     gene            complement(8844..9425)
                     /locus_tag="U0308_001590"
     CDS             complement(8844..9425)
                     /locus_tag="U0308_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEM2316557.1"
                     /translation="MKNEKVNVGIVLAGGRSSRFGEPKAFFQDEATGKTWVELTVSKL
                     LPLCDMVFVSANHENHSKLVALFDAEPSIEIIPDQTAFSEFGPLGGIYAVMVEANAYQ
                     KANFLVLPVDMPFLTPKEIGRLADYPNHFAKTAQANHYLVANIPYSREVLHHLLQDEQ
                     HRVRALLEKLHTKPLAFEEDAPFRNINHQNELF"
     gene            complement(9406..10068)
                     /locus_tag="U0308_001591"
     CDS             complement(9406..10068)
                     /locus_tag="U0308_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2316558.1"
                     /translation="MLRLQFHKKLPFHDLNIDYTFEKPVTAMMGASGSGKSTLFQCVS
                     GLKSIDGGIIEFDGTPWDDSNISLHLPVTERKVGYLFQNLALFPNMNVYENIAFGLKV
                     KKKKKKEQAEIQQQVRKMSDYLQISHLLYSSVQKLSGGEKQRVAMTRAMITEPKLLLL
                     DEPFNGLDEETRLICMKLVGQMAKDFHIPVIFVTHYASEAEMMTEEILVMREGRLEKR
                     KS"
     gene            complement(10071..10742)
                     /locus_tag="U0308_001592"
     CDS             complement(10071..10742)
                     /locus_tag="U0308_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter permease"
                     /protein_id="HEM2316559.1"
                     /translation="MFTSVWHTLLVATISTFLAFMTMLPLSYYFAGRKSRFQLPVEIL
                     ILLPLVLPPTVVGLVLLNVLGRNDFIGGVLWDTFDFSFIFSLSGAIVATTIIILPIMY
                     QGLKSAFLSIDHELVWAAETLSANKKQIFTKIILPNCWQPILAGVLLSFCRAMGEFGA
                     SLMVAGYIEGKTDTIASSIYFMVQQGDMRTAIYLGLINVIIGVFALLVIHVLTIRQSN
                     LTRGM"
     gene            10847..11617
                     /gene="modA"
                     /locus_tag="U0308_001593"
     CDS             10847..11617
                     /gene="modA"
                     /locus_tag="U0308_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2316560.1"
                     /translation="MKKIALIICCGLLLLLGACEDTPEKAKTTTIHISAAASLKDTID
                     DVKPLFEKANPTIKLSFDFGGSGQIRERVESGAPIDGVLLASKKDADTLIKQNLAEKT
                     KEFAGNELVLIEPKNVDQKAGMNLEQLLNDASKIAIGDPESVPAGAYAKQTLENLNLY
                     NAEKAKLVLATDVRQVLSYVEAGNADAGFVYQTDALLSKKVQVKAKIDEKLHDPIAYY
                     SAQVSDSDKKEETATFLDFMNTSEAQKILEKYGFKAAN"
     gene            11712..12935
                     /locus_tag="U0308_001594"
     CDS             11712..12935
                     /locus_tag="U0308_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HEM2316561.1"
                     /translation="MIEKRNTIRMEQAREILCNQITHLPVEKKCVTEALNQVLQEPIF
                     APFPAPYFRRSGYDGFAITEEDDENYPITLHVVAEVPCGETYDKPLKPGETVRIMTGA
                     KVPDNASKIIMLEQSREADNENEIVLINTQKSTNITEIGTEFAKGDLLLDRGHILNAG
                     SISLLSSFGIQEVQVIRKPKVAILSTGSELVSAGNPLPDGKIFNSNQPLLENLLKVHH
                     AEICAAEQLPDNYEDTKKRLLELTQIADLIITTGGVSVGDFDYMADIAKKEAELLFNK
                     IQMRPGSPTTGMWLDNTLIIALSGNPGACFTGFYLFVEPVLATLMGKDTTETTKVRAK
                     MASDYTKNNGYDRFLRGTYRLSDEGEYLVELVGSDMSSALGNLHLTTCLFKIPRGKVG
                     KLKGEEVEAWLLSSK"
     gene            12914..13399
                     /gene="mobB"
                     /locus_tag="U0308_001595"
     CDS             12914..13399
                     /gene="mobB"
                     /locus_tag="U0308_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEM2316562.1"
                     /translation="MATILQIIGFKNSGKTTLLNALIRASRKENYTVSAIKHDAHDFS
                     VDHAGTDSYSFQESGAEAVVIANSRQYAVMEQTGIDLKTAIQKLPESDIVLIEGYKEG
                     PFPKIILIREQAEIELLNNSKAVHKIATHNPALKNEAIFIGEEKALTLFAETLIKEFL
                     K"
     gene            13396..13818
                     /locus_tag="U0308_001596"
     CDS             13396..13818
                     /locus_tag="U0308_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEM2316563.1"
                     /translation="MKYVALQHEKIEIGPLSEKLINKNHGGTNLFVGTIREWTGDIQT
                     EEIRYTSYEEMALKELNKLAAEVETKWGADVVIVHRLGLLQITDVAVVIGVSTPHRAA
                     CYEGSRYIIERLKERVPIWKEEKDVDKTRWGGIDANNS"
     gene            13802..14050
                     /gene="moaD"
                     /locus_tag="U0308_001597"
     CDS             13802..14050
                     /gene="moaD"
                     /locus_tag="U0308_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HEM2316564.1"
                     /translation="MLTTVKFFAFLADKTHKTEVKLNLQQCQTVGEVREVISSEFPEI
                     AVDLATCMLAVNMEFQQDQDLLPEEITEIAVIPPVSGG"
     gene            14063..14545
                     /gene="moaC"
                     /locus_tag="U0308_001598"
     CDS             14063..14545
                     /gene="moaC"
                     /locus_tag="U0308_001598"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEM2316565.1"
                     /translation="MEKDDLTHFNDEKRAKMVDVTSKSETKRRAIARATIHMNEETLA
                     RIHAGKIAKGDVLAVAQVAGIMAAKKTSELIPMCHPIMTTKADISFEDDGKTALTITS
                     EVVTVGKTGVEMEALTAVTIAALTIYDMCKAMDKGMRIEKTYLVEKTGGKSGTFKAEA
                     "
     gene            14574..15575
                     /gene="moaA"
                     /locus_tag="U0308_001599"
     CDS             14574..15575
                     /gene="moaA"
                     /locus_tag="U0308_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEM2316566.1"
                     /translation="MQLLKDKFGRVHDYIRISVTDRCNLRCVYCMPEEGLTFLPHEKV
                     LSKDEIVSFMELMVKFGIKKVRITGGEPLLRTDIVEIVRGLGAIPEIEDISITTNAMY
                     LAKKAEALKDAGLTRVNISLDSLHEDRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLN
                     VVLIKGQNDDEITDFLRFTKDKDINIRFIEYMPIGHAGTSWKEKYLPLDTIFEACNEA
                     GYEYEPVDSIRGNGPSENFRIKGAKGTFGVIHPVSAHFCDSCNRLRLTADGYIKACLY
                     WDEEMNIRPFIQDPVKLMQLVQKAIDNKPENHEMALKLQDEVQSNKPTWRRMSQIGG"
     gene            complement(15610..16098)
                     /locus_tag="U0308_001600"
     CDS             complement(15610..16098)
                     /locus_tag="U0308_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaB"
                     /protein_id="HEM2316567.1"
                     /translation="MEQKTFIKVTCSILTISDTRNLDTDTSGQLIQSALETAGHEVIS
                     RIVVPDDVTLIKQKINELAANGSFCLITNGGTGIARRDVTYEALFATIQQEIPGFGEI
                     FRMLSYEEVGSRAMVSRAFAGFSESGLLLFALPGSSNACQLAVQKLIIPELPHLIAER
                     QK"
     gene            complement(16110..17108)
                     /locus_tag="U0308_001601"
     CDS             complement(16110..17108)
                     /locus_tag="U0308_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HEM2316568.1"
                     /translation="MERYDRQMRVKNIGKVGQKKLLTKTILIVGVGAIGSYAAEICAR
                     MGFGKLILIDRDYVELSNLQRQSLFTEQDALDKQAKAYAASKALQLINSDIEIEYIVD
                     DANATSLTPYAGAIDYILDCTDNFMTRDFLNQFCFSHQIPWIFTSCAGNYANLMPIIP
                     PDSACLHCLLGDIPQTNAASCDIIGVDGALIPIVAGMQVSLLTQMIINPDFKSNTYYQ
                     LDNWQFSFRSLEVKKRPDCSGCATGKMISEVPFSEQTVALCGRDTVQFRLPNKSNYHE
                     IKQMLTEQKIIYNENPALLSFQYEKFQFVIFKNGRVLLHGTENITEAKKTYHLFFN"
     gene            17240..17794
                     /locus_tag="U0308_001602"
     CDS             17240..17794
                     /locus_tag="U0308_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase"
                     /protein_id="HEM2316569.1"
                     /translation="MKQRIETEKFYPAYPVFVLTYLNEVGEPQMSTGSSSYTLGDSIV
                     IGVSAESNASKHLHAGQKFAVNFPNTEQLGLIEQGGFSSGKRNDKIKVHQIELTKSDS
                     GGVAYIDVCPIVLECTVIQTVSDMDYHTIFAKIDSRLFEKNLVDSDGHFIHEELDLVL
                     FSGDANERKFRQLDTKIETVGGHS"
     gene            complement(17843..18394)
                     /locus_tag="U0308_001603"
     CDS             complement(17843..18394)
                     /locus_tag="U0308_001603"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEM2316570.1"
                     /translation="MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGREMLEFLINS
                     QDEELAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQA
                     CLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNG
                     IMFYDHINKENPSYLPPDVDVFG"
BASE COUNT         6207 a         3198 c         3888 g         5375 t
ORIGIN      
        1 aatatataaa ataatcttta attttattga cttagtttag aaatgatact ataatgcaaa
       61 taaagaaagc gattactgat tgctttttat gagaactaaa ataattacta aactaaaaag
      121 gtggttagaa ggtggaggcg gttaaaattg ggtttgcgcc gacaaggcga agtatattta
      181 gtgcaccaga tgcagtcaaa tatgcgaatc tcacacgaga taaactaaac gaactaaata
      241 ttgaatttgt ggacattgca gaatttaatg aagatggatt gctttatgat gatgcagata
      301 tgatgaaaat tgcagcaaaa tttaaaaagg ctggaatcca aggtttgttt ttaccacata
      361 ctaattttgg aacggaatat gtttgtgcga gacttgctaa agagttagat gtaccagtat
      421 tgctttgggg tccgcgtgac gaacgacctg atgaaaatgg tgtgagactt cgagatacgc
      481 agtgcggttt gtttgcaact ggaaaaatct tacgtcggtt tcaagtacca tttacttata
      541 tgacaaattg ccgtctatct gatccagagt ttgaacgagg aattcgagat ttcattgcag
      601 tttgtaatac ggtaaaaaca tttcaaaaca tgcggatttt acaaattgga ccacggccat
      661 ttgatttttg gacaacgatg tgtaatgaag gagagttgct agaaaaattc aatattcaat
      721 tagctccaat tccgcttcca gaattaataa aagaaattcg tagcgtatct agcgaacaaa
      781 tagaggaagt ggatggaacc gtcgaatatt gtcacggttg tgcaatcgtt aaaattaaag
      841 aagttgactt acgaatggtt gctgctctta aagttgcgat gaaaaattta gcaacaaaat
      901 atggttgtag tgcgattgcc atccaatgtt ggactgcact tcaagatgaa attggtatta
      961 tgccttgcgc tgcaaacgcg atgctcatag atgaaggaat tccagttgtt tgtgaaacag
     1021 atattcatgg agcaatttct tgtttattaa tcgaagcggc aaatttgggc agaaataaaa
     1081 gtttttttgc agattggact gttagacatc cagataatga gaatggtgaa ttgctacaac
     1141 attgtggact gtttccgttt tctgttgcaa aagataaacc ggcaattggc tatccgttag
     1201 catttgattc acctggtgca gtcgaagcgg aagcgaaagg tggcgaatta accttatgtc
     1261 gttttgatgg tgataatggc gaatattcct tgttactggg taaagcgaga ggtattgaag
     1321 gtccgtatac aaaaggaaca tatctttgga ttgaggtaga taatttgaaa cgattagagg
     1381 aaaaaatcgt ttcaggacca tatattcatc atgttagtgg tatccatgca gatgtggtcc
     1441 ctattcttta tgaagcatgc aaatacattg gcataaagcc agacctctat gatccaattg
     1501 aagaagatat aaaagcttat ttacgcggtg aatagagaaa ggagtaaaaa tgagtgaatt
     1561 aaagttaaaa tcgtttgaaa ttagaaaaga tgttctaaaa atgatatatg atgcaaaaac
     1621 gggacatact ggttcagatt tatcatgtgc ggatattctt gtggcgcttt actatggtgt
     1681 gctgaatgtt aatccggaaa atccagaagc tttagatcgt gatcgttacg ttcaaagtaa
     1741 aggacatgct gtcgaagttc tttgggcagt tttagcagat aaagggtttt ttgcaaaaga
     1801 agaattggct gatttctccg catttggctc gcgtttaatc gggcatccaa ataataaagt
     1861 agctggaatt gaaatgaaca caggttcgct cggccatggt ttatctgttt cggtgggtat
     1921 ggcattagct gctaaaatgg atgggaaaag ttatcacacc tatacactca tgggggacgg
     1981 ggaacttgca gaggggtctg tctgggaagg cgcaatggct gcagcaaatt ataaattaga
     2041 taatttgact gcgattattg atcggaattc cttacaaatc tccggtcgaa cagaagatgt
     2101 aatgagtgta gaacctttgg cagataagtg gcgcgcattt ggttgggatg ttatcgaagt
     2161 ggatggaaat gatccggata agctacaagc gatttttaaa acagttaatg tgactggaaa
     2221 acctcgtcta attattgcaa aaacgataaa aggttatggg gttaaaatag ctgaaaatgc
     2281 tgctaaatgg catcattacg taccaagcag tgaggaatac gaaatagcta tgaaagattt
     2341 agaggaaaga atggaggcat gccgtcatga ataaaatagc gaaccgccaa gtaatgtgtg
     2401 aagttttaat gaaagaagca actcgtaacg atagtaattt agttgtttta acaagtgatt
     2461 caagaggatc cgcttcactg ggggcttttg ctgagaaatt tccagagcga ctagttgaaa
     2521 ctgggattgc cgaacaaaat attgttggaa ttgcagcagg cttagcacat agtggcaagc
     2581 gagcttttgt cgcttcacca gcatgttttc taagtatgcg cagtattgaa caggtaaaag
     2641 tagacgtggc ttactcagac acgaatgtaa aattgattgg tatcagcggt ggtgttagtt
     2701 atggtgcact tggtatgagc catcattcgc ttcaagatat tgctgttact agagcgattc
     2761 ctaatttaga agtcattcta ccagctgatc gtctggaaac ggaagctgtt tttgactatt
     2821 tgcttcaatc aaatcggccg gcgtacgttc gtcttggcag aaatgcggta gaagattgtt
     2881 acgcagaaaa accagtattt caaattggga aagctggaac ccttaggaaa ggaaacgatg
     2941 tgtcaatttt agcaactggt gaaatggtac gagtcgcact tgatgcaagg gaagaattga
     3001 agttgaaagg aatcagcgca cgcgtattga atttttcaac aatcaaacca tttgaccagg
     3061 gagcagtaga agcggcatta gctgaaacaa aactacttat tagcatagaa gaacatagta
     3121 tttatggtgg cttaggtgca gcagtgagtg aagtggtaag tagttcgcca acaagtattc
     3181 gtcatttgat cttaggaatt ccagatgaac ctgctatcgc tggaacgagc caagaaatct
     3241 ttgattatta tggcttatct gctactggta ttgttgctac agttatgaaa aaccttggag
     3301 acgaaagaag atgaagaaac actatcaaat cgctattgat caaagcacat ctggaacgaa
     3361 agtattattg tttaaagtag gtgaacttgt agatcgttta gataaaaagc atcgacagtt
     3421 gtatccgaag aaaggctggg tagagcataa tccaatcgaa atttgtcaaa atgtccgtac
     3481 attaattgcg gacatattgg caaaacatga tttaattcca gcggatatcg agcgacttgc
     3541 tttgacgaat caacgggaaa caattgtagc ttgggataaa caaacaggca agccacttta
     3601 taatgcgatt gtatggcaat gtaatcgaac aaaagaactt tgcgaaacat taaaaaaagc
     3661 tggttatgaa aaaagaatta aacagcttac cggattgaaa attgattctt atttttctgc
     3721 ttctaaaatg aagtggttat tggaaaatag ttctgcggtg cgggatgcag caagtcgtaa
     3781 tcaattggca tttggcacaa tggatgcttg gttgttattt tcgcttacgg atgatagtaa
     3841 ttatttcaca gaccgaacaa acgccagccg cacactcctt tatgatattg aaaaaaatga
     3901 ttggtcagat gagttactcg aactttttgg agttaaacgt gcttatttac cagaagtgaa
     3961 gcaatctgct ggaagttttg gaagttatca ggagataccg attcatagtg tgatggctga
     4021 ttcagaagcg gcactttatg gacaaggctg tgatgcattt ggggcagtga aggcgacgct
     4081 tgggacagga tgctctgtta tgatgcaaat tggtgagaac agattacctg aaaacgatgc
     4141 tattttgaca actcttgcct gggatgttgc aggcgtgaac cagtttgcgt tagaaggaat
     4201 tattcgttct tgtggagaca cattggtttt tttatccgaa caattagaac tatttaatga
     4261 ttacgataca gcttgtaagc gagcatttca attaccatgc aatgagggtg ttgtgctaat
     4321 tcctggacaa ttaggtttag gttcgcctta ttggaataca gatatacgag cagagattct
     4381 tggtctcaca cgagaacata caaaatggca tattattcgt gccggtttta caagtattgc
     4441 atttcaaatt aaggctgtta ttgaccaaat ggagttaatg acaggtcaaa atattaagcg
     4501 cttacaagta gacggtggat taacaaagca acatgagttg atgcaatatt tagcagatgt
     4561 tttaaaagca gaagtggcag tcagtcccgc ggaagaactt tcggcaattg gtgctattga
     4621 aattgccgac aataaactac aaaataagag aacgatagca aaattgtacc aaccaaatat
     4681 cactcataca catgctttgg aagattttca agaatgggaa aaacaagtga aaagcagtat
     4741 tctaaaatta cagaaggtga ggaattttaa atgaataatt cggatcttgc aaaagaggtt
     4801 gtaaagcttg ttggtggaaa agaaaacatt ttgagtgtaa ttcactgtgt gacaagacta
     4861 cggtttaagt tacgtgatga aaatctagca gaaacagaaa aaatcaaagc cttaaaaggt
     4921 gttatgacgg ttgtgaaaag tggtggacaa taccaagtgg ttatcggtga tcatgtgagt
     4981 tatgtttatg atgaggtcat tcgagtatta gggattaaac cagatgatgc gccgcaagat
     5041 aaccctgaac aagaacacaa aagtattttt aataagtttg ttgaattaat ttctggaata
     5101 tttatgccag tactgggtct attggcagct tcaggtattt tgaaaggatt cctgacagcg
     5161 gcagttacaa tgggactaat taatacctca gctggtgttt acgaagttct ttacgcagca
     5221 agtgatgccc tcttttactt tatgccaatt atacttgggt tttcagcagg gaaagtattt
     5281 aaaacgaatc aatatctttc tgctgcggtt ggtgcagcac ttgtttaccc gacgcttgtt
     5341 gatatgtata gcagcggagc tcatttaaca tttctacata tccctgtaat tttaatgaat
     5401 tatacaatgt ctgttattcc tgttatttta gctatttact ttatgagcaa actagaaaaa
     5461 gtattagtga aatttattcc gaaaagttta caattgattt ttgtccctct cttattactt
     5521 ttaattgtgg tgcctgtatc tctaattatt atcggacctg tttcaacata tgctagccaa
     5581 ctacttgcaa aaggagcatt gggactttat tcgcttagtc caatgattgc aggattcttc
     5641 ctggctggta tttggcaagt ggctgtcatg ttcggattac actgggcatt tatcccgatt
     5701 ttcattaata atatttctgt tttagggtac gatccaatta atgctatgct ttattgtact
     5761 gtattcgcgc aaactggtgc ggttctggca gtaatgctta aaacccgaaa ccaagaatta
     5821 cgttcccttt ctataacagc aactatttca ggatttttag gaatcacgga accagcgatt
     5881 tatggagtaa acttgccata taaaaaacca tttattatgg cttgcgtagg atcagcattt
     5941 ggtggggcaa ttgcagggat gagtgctgcg aaaatgtttg gaggcttcgc gtctggtggg
     6001 attttcggta ttccgatgtt cattaatcca gatggaatag gatgggattt ttggggattc
     6061 ttaatttctt tagtagtggc attcagtgta gcgttgattt taacttattt ctttggattt
     6121 aaagataaag ttgaggaagt tgtgattcaa acaggagaaa aagctacatt agacgaaact
     6181 atttatagcc cacttcaagg ggaaataatt gcattaaatg atgtgaaaga tgaagttttc
     6241 tctgctggta taatgggagc aggagtagcg attcttccag cgagtggcga aattcgtgct
     6301 ccatttgatg gaacagtact tagtgttttt caaaccaagc atgcgatagg gttgatttcc
     6361 aaacaaggag tcgagttgtt aattcatgtt ggacttgata cagttaatct aaatggtcaa
     6421 ttttttgaca ttgaagtgag cgaatcagaa gaaataaaaa agggcgattt attaggaaga
     6481 tttgaattag atgcaattaa aaaagctggc tatgatatta caacgcctat tattgtaact
     6541 aatagtgcca cactcgccga tgttattaca gtgaaccttg gaaaaagcgt agataataac
     6601 caaaagattt tagaagcaaa ggcttaatat agaaagggtg aaaaaaatgt taaaacaaag
     6661 tgcagacaag cgccggattg agaaaaatga caaacctttt ttctaccttg cagatactgt
     6721 ttggagtgcg tttacaaata ttgatttaac agattgggcc tactatttaa aagtccgaaa
     6781 agagcagggg tttaatgtac tgcaaatcaa tattttgcca caatgggatc gaagtatact
     6841 aaaaaaaatg caagagccgt tcggtataag tgaaggtttt ttcgatttaa aagctaaaaa
     6901 tgaagcttac tttaaacatg cagaaaagat gttagaaatg gcagtgaatc aaggttttac
     6961 tccagcgctt gtgttattgt ggtgtaatta tattccagag acgtgggggg caaaatttgg
     7021 tacttcacca ctgtttcgaa aagaagacat taaaccctat acagaaatga tgttggaaca
     7081 tttcgagcaa ttcgaaccaa tttatatcat tagtggggac acggattttc caacggaaac
     7141 tgtagcagct tattatttgg aagctttaga aaccgtttct aaaaaagcgc cacacgcact
     7201 taaagttttg catatttgcg gtcgtttgaa agatattccg gaaaatctgc aaacacatcc
     7261 agcacttgat ttgtattttt atcaatctgg acataattcg gagcaccaat caatggcgta
     7321 tacgttggca gaacacttta gtcagttaga gccaatcaag ccagttatta attcagaacc
     7381 gtgttacgaa ttaatgggat atagtcgaca aaaatatggt cgttttagcc gagaagatgt
     7441 acgaaaagca gcttggcaaa gtgtcttatc tggtgctata gctggtattt cttatggggc
     7501 acatggtatt tggagttggc atgaagaagg aagtacattt ggatcagctc taggcgaagg
     7561 ttttgtttct ccatttaatt ggcgacaagc acttcatttt gaaggagcta cagattatgc
     7621 atttctaaaa tcctttattt tggcaaatga cttaacaaca ctggcaccaa taaatttagt
     7681 tttaaatcaa actccagaaa ttcgagcagc ggagaccgaa aaagtagtta tcatttatgt
     7741 gccatcaaat gtcccaattt atttgaaagg gcaatttgct tctttggatg actacgcgat
     7801 tgatttggag caaggtaaaa aggtcagcct tacaaaaata cttcatgaag aaaaaacaga
     7861 aattcagatg actccttttt taaaagatag tttatatgta attcacaaat aaattccaat
     7921 ttctttctgg aaaaaataat tttgtttacc aataaaaact aaagcgaggc cactatttca
     7981 gcgtggcctc gcttttggct tttacagaag tttgttctaa tttttgctta acaaatttaa
     8041 gttgtgcgac gattataata ctaataataa caagtaaata ccaactcgta atttttgaaa
     8101 cgtgcaccgg acgccatgca atcagctggt ctggataaga ccaagctccg taaaaactag
     8161 caatgttctc cgcaagataa atgaaaaagg cgatgcataa aaaggaaaaa gataaaggca
     8221 ttttgagttg agtcgaacta actttgaaat aaacatatgt ttttcggaat aaaacgagaa
     8281 ctaaaacaat caaaatccac cgaaaatcca ttataaaatg atgcgtgaaa aaattagcgt
     8341 aaattgttat gcaaaggcta cttactaacc agatatttgg ccaatttgtc attttaagat
     8401 caaatctttt ccaagcctga caaatataac tcgccacact tgaatacata aaaccgctat
     8461 aaagcggcac accgaaaagt ttcattaaac caggctctgg ataactccat gaccccatat
     8521 gtactttata gatttcaagt ccaagtccaa taagatgaaa aaccataatt accttaagtt
     8581 catcccatgt ttctaaaccg aattttataa gtagcacttg cgttccaaga caaataatca
     8641 aaagtaagtc gtagcgcgca ataaaaggaa tatcaatcaa ttttgtaagt gcaagcgaaa
     8701 taaagataat gcctggaaaa atacaacaaa gtgcttgctt ccaagtaaac acccaaagta
     8761 agcggaaaaa ttgcataaaa aaacctcttc tcatgatttt ctctagttta ccaaaaaaaa
     8821 ctaaagaaaa ggacaagaaa aggttaaaaa agttcatttt gatgattgat atttctaaat
     8881 ggggcatctt cttcaaatgc taaaggtttg gtatggagtt tttcgagtaa agctctgaca
     8941 cgatgttgct cgtcttgtag taagtgatgt agcacttctc gtgagtaggg aatattggca
     9001 accaaatagt gatttgcttg cgctgtttta gcaaaatgat taggataatc agccagtcgt
     9061 ccaatttctt ttggagtcaa aaaaggcata tcgacaggaa gtactaggaa attagctttc
     9121 tgataagcat ttgcttctac catcaccgca taaattcctc caagcggtcc aaattcactg
     9181 aatgcggttt gatctggaat gatttcaatg cttggttctg catcaaaaag agccacgagt
     9241 tttgaatgat tttcatgatt tgccgataca aataccatat cgcaaagcgg cagcaactta
     9301 ctaaccgtta gctcgaccca cgtttttcca gttgcctcat cctgaaaaaa cgcttttggt
     9361 tccccaaaac ggcttgagcg accaccggct aatacaatgc cgacattaac tttttcgttt
     9421 ttcaaggcgt ccctctcgca taactaaaat ttcttcggtc atcatttctg cttccgaggc
     9481 ataatgcgtg acaaaaataa cggggatatg gaagtctttg gccatttgac caactaattt
     9541 catacaaatc aaacgcgttt cttcatctaa accattgaaa ggttcatcca gtaaaagtaa
     9601 ttttggctcc gtaatcattg ctcgagtcat cgcaacacgt tgtttctcgc caccagataa
     9661 tttctgaacg gaagaataaa gcaggtgaga aatttgtaga taatcactca tttttcgtac
     9721 ttgttgctga atttctgctt gttctttttt cttctttttc ttcactttca agccaaaagc
     9781 gatattttca tacacattca tatttgggaa tagagctaaa ttctgaaata aataacctac
     9841 tttgcgctct gttacaggaa gatgtaacga aatattggaa tcatcccacg gagtcccgtc
     9901 aaattcaata atgccgccgt caatactttt caagccacta acgcactgaa atagagttga
     9961 cttgcctgaa ccacttgcgc ccatcatcgc ggttactggc ttttcaaacg tataatcaat
    10021 atttaaatca tgaaaaggaa gttttttgtg aaattgtaat cgtagcataa ttacatcccc
    10081 ctcgttaaat tactctggcg tatagttaat acatgaatga caagtaaagc aaacacgccg
    10141 ataatgacgt taattaatcc aagataaatc gcagtacgca tgtctccttg ttgcaccata
    10201 aaatagatgc ttgaagcaat ggtatccgtc ttgccttcaa tataaccagc caccatcaaa
    10261 cttgcgccaa attcacccat cgcccgacaa aaactaagca aaacccctgc taaaattggt
    10321 tgccagcaat tcggtaaaat aatttttgtg aaaatttgtt ttttattcgc tgaaagagtc
    10381 tctgctgccc atacaagttc gtgatcaatt gataaaaatg ctgatttcaa accttgatac
    10441 ataatcggta aaataataat tgtcgttgca acaattgcgc cgctaaggga aaaaataaag
    10501 ctgaaatcaa aagtatccca aagcacacca ccaataaaat cattgcggcc gaggacgttc
    10561 agtaaaacta aaccaaccac agttggcggt aaaacaagcg gaagtaaaat taaaatctcc
    10621 actggtaact ggaaacgtga ttttcgaccg gcaaaataat aactcagtgg taacatcgtc
    10681 ataaacgcga gaaacgtaga aattgtagct acaagtaatg tatgccaaac agatgtaaac
    10741 ataaatctcc tcctgaaccc tctagtactt ctattattat cgttctctct ggtataaaat
    10801 gtcaaactta agtacaatgt aactaaataa aaaaggggga tgaagaatga aaaaaatagc
    10861 acttattata tgttgtggat tattactact tctcggagct tgcgaggata cacctgagaa
    10921 agccaaaaca acgactatac atatttcagc tgcagcaagt ttaaaagata cgatagatga
    10981 cgtaaagcca ctttttgaaa aagctaatcc aacgattaaa ttatcctttg attttggtgg
    11041 ttctgggcaa attcgcgaac gtgtcgaaag cggtgcacca attgacggcg tccttttagc
    11101 gagtaaaaaa gatgcggata cactgattaa gcaaaattta gcagaaaaaa cgaaagaatt
    11161 tgcgggaaat gaactcgttc taattgaacc taaaaacgtg gatcagaagg cagggatgaa
    11221 cttagaacaa ttacttaatg atgcatccaa aatcgccatc ggggatccag aatcagtacc
    11281 agcaggcgcc tatgccaaac aaacgctcga aaacttaaat ctatataatg cagaaaaagc
    11341 aaaactcgtt cttgccaccg atgttcgtca agtcttatcc tatgtggaag ctggaaatgc
    11401 agatgcaggc ttcgtttacc agacagatgc tctattaagc aaaaaagtac aagtgaaggc
    11461 aaaaatcgat gagaaactcc atgatccaat tgcttactat agcgcacaag tcagtgactc
    11521 ggataaaaaa gaagaaaccg caacattcct tgattttatg aatacatcag aagcgcaaaa
    11581 aatactggaa aaatacggat tcaaagcagc aaactaagga gaagtcgctt tactttttaa
    11641 aacaagcaaa ctcctgtata ttggtactaa agaaaacgca tacattattt aggaaaggga
    11701 agtgcgccca gatgattgaa aaaagaaata ccattagaat ggaacaagcg agagagatat
    11761 tatgtaatca aataacgcat cttccagtag aaaagaaatg tgtgacagag gcgttaaacc
    11821 aagtactaca agaacctatt ttcgcgccgt ttcctgctcc ctattttagg cgctctggtt
    11881 atgatggctt tgcgattact gaggaggatg acgagaatta tcctatcact ttgcacgttg
    11941 tagcagaagt tccgtgtggg gaaacatacg ataaaccgct aaaacctggt gaaaccgtcc
    12001 gaataatgac tggagcaaaa gtgccagata atgcctcgaa aattattatg ctcgaacaat
    12061 caagagaagc ggataacgag aatgaaatcg tacttataaa tacacaaaaa tctactaaca
    12121 ttacagaaat cggtacggag ttcgccaaag gagatttgct gttagatcgt ggacacattt
    12181 taaatgccgg ttcgataagt ttactgtcat cctttggaat tcaagaagta caagtcatca
    12241 gaaaaccaaa agtagctatt ttatccacag gtagtgaact tgtttctgct ggaaatccac
    12301 ttccagatgg caaaattttt aatagtaatc aaccattact ggagaattta ctaaaagtac
    12361 atcatgccga gatttgcgcg gccgaacaat tacctgataa ttatgaggat acgaaaaagc
    12421 gattactaga attgactcaa atagcagact tgataatcac tacaggtggt gtttctgtag
    12481 gggactttga ctatatggct gatattgcaa aaaaagaggc agaattactt tttaataaaa
    12541 ttcaaatgcg accgggcagt ccgacaacag ggatgtggtt ggacaacacg cttatcatcg
    12601 cactttctgg taatccaggg gcatgcttta caggttttta cttattcgta gaaccggtat
    12661 tagctacctt aatggggaaa gatacaactg agacgaccaa agtccgtgca aaaatggcga
    12721 gcgattacac taaaaataat ggctatgatc gttttttacg aggaacctat cgtttgtctg
    12781 acgaagggga atatttggtt gagttggtag gaagcgatat gtcgagtgcg ctaggaaacc
    12841 tccatttaac cacctgttta ttcaaaatcc ctcgcggtaa agttggaaaa ttaaaaggag
    12901 aagaggtcga agcatggcta ctatcctcca aataatcggc tttaaaaata gcgggaagac
    12961 aactttacta aatgcactaa ttcgagctag tcggaaggaa aactacacag tatctgccat
    13021 caaacatgat gcacatgatt tttctgtaga tcacgcggga acggattcct actcgtttca
    13081 agaaagtggt gcagaggctg ttgttattgc gaattcgaga caatatgctg tgatggaaca
    13141 aaccggcatc gatttaaaaa cagccattca aaagttacca gaatcagata tcgttcttat
    13201 agaaggctac aaagaaggtc cttttcctaa aattatttta attcgcgaac aggcggaaat
    13261 cgaactttta aacaatagta aagctgtcca taaaattgcg acgcataatc cagcgttaaa
    13321 aaatgaagct attttcatcg gcgaagaaaa agctttaacc ctttttgcag aaacgttaat
    13381 caaggagttt ttaaaatgaa atatgtagct ttgcaacatg aaaaaatcga aataggacca
    13441 ctttctgaaa aactaatcaa taaaaatcac ggtgggacta atctttttgt tggtacaatt
    13501 cgagaatgga cgggtgatat tcaaacagaa gaaattcgtt acacatcgta cgaggaaatg
    13561 gcgctcaaag aactaaataa attagcagca gaagtagaaa caaagtgggg ggcggatgtt
    13621 gtcatcgtcc accgactagg acttttacaa ataacagatg tcgctgtggt catcggtgta
    13681 tcaacaccac acagagccgc ttgctacgag ggatccagat atattattga acgtttaaaa
    13741 gaacgggtac ctatatggaa agaagaaaaa gatgtcgata aaacaaggtg gggtggcata
    13801 gatgctaaca acagttaaat ttttcgcttt tttagctgat aagacacata aaacggaagt
    13861 gaaattgaat ttgcagcaat gccagacagt tggcgaggtt cgagaagtta ttagtagtga
    13921 atttcctgaa atagccgttg atttggcaac atgtatgcta gctgtgaata tggaatttca
    13981 acaagatcaa gaccttttac cagaagaaat aaccgaaatc gcagtcattc cgccagtaag
    14041 cggtggataa ggagggtaat agatggaaaa agatgattta acgcatttta acgatgaaaa
    14101 acgcgcaaaa atggtagatg ttacgagcaa atctgaaaca aaacgccgtg caatcgctag
    14161 agctacgata catatgaatg aagaaacctt agcgcgtatt catgctggta aaattgctaa
    14221 aggagatgtt ttggccgttg cgcaagttgc tggaatcatg gcggctaaaa aaacaagcga
    14281 actaattcca atgtgccatc cgattatgac gacaaaagct gatatttctt ttgaagatga
    14341 cggtaagacc gcgctaacta tcacgtccga agtcgtaacc gttggaaaga cgggcgtcga
    14401 aatggaggcg ctcacggcag taaccattgc agcattaacc atttatgaca tgtgcaaagc
    14461 aatggataaa ggcatgcgga ttgaaaaaac gtatttagtg gaaaaaacag gtggaaaaag
    14521 cgggacattt aaagcagaag cgtaactatt ttgtaggata ggagttttgt tttatgcaat
    14581 tattaaagga taaatttggg cgggtacacg attatattcg tatttcagta acagatcggt
    14641 gtaatttaag gtgtgtgtat tgtatgcccg aagaaggcct gacatttttg cctcatgaaa
    14701 aagtactatc caaagatgaa attgtcagct ttatggaatt aatggtgaaa ttcggcatca
    14761 aaaaagtccg catcactggc ggagagccgt tactaagaac tgatatagtg gaaattgttc
    14821 gcgggctggg agcaattcct gaaatagagg atatttcgat tacaacgaat gctatgtatt
    14881 tggcaaaaaa agcagaagca ctgaaggatg cggggctcac acgtgtgaat atcagcttag
    14941 attctcttca tgaagatcgt tttaaagcaa ttacacgagg tggccgtttg caaaaagtac
    15001 ttgatggtat tcaaaaagca gaagaagttg gactgttccc aattaagctt aatgtcgtac
    15061 taattaaagg acaaaacgat gacgaaataa ctgatttcct tcgatttaca aaagataaag
    15121 atattaatat tcgtttcatt gaatacatgc caattggtca tgctggtacg agttggaaag
    15181 aaaaatattt gccgcttgat acaatttttg aagcttgtaa tgaagctggt tatgagtatg
    15241 aaccagtgga ctcgattcgt ggaaatggcc cctccgaaaa tttccgtata aaaggagcga
    15301 aagggacgtt tggtgtgatt cacccggtta gcgctcattt ttgtgatagt tgcaaccgac
    15361 tcagacttac tgcagatggc tatattaaag catgtttata ctgggatgaa gaaatgaata
    15421 tccgcccatt tatccaagat ccagtgaaat taatgcaatt ggtgcaaaaa gcaattgata
    15481 ataagcctga aaatcatgaa atggcattaa aattacaaga tgaagtacaa tctaataaac
    15541 caacttggcg gcgtatgagt caaattggag gataaataaa acatccggtc acatgtgtgg
    15601 tcggatgttt tatttttgtc gttctgctat taaatgaggt aattctggga taatcaattt
    15661 ttgaacagcg agctggcaag cgttacttga tccaggcaac gcaaaaagca gtaagccgct
    15721 ttctgaaaag ccagcgaatg cacgagacac catggcgcga ctaccaactt cttcgtaact
    15781 gagcatcctg aaaatttcac caaacccagg gatttcttgc tgaatcgttg cgaataatgc
    15841 ttcatacgta acatcacgcc tagcaatacc ggtaccacca tttgtgataa ggcaaaagga
    15901 cccattagct gctaactcgt ttattttttg cttaatgagc gtaacatcat caggcacgac
    15961 aatccgcgaa ataacctcat gcccagcagt ttctaaggca gattgaatca gttgaccact
    16021 agtatccgta tccaaattcc ttgtatcact aatcgttaaa atactacaag ttaccttaat
    16081 aaatgttttt tgttccataa ctgcctcctt taattgaaaa ataagtgata tgtttttttc
    16141 gcttctgtta tattttctgt cccatgaagt aacacgcgtc catttttgaa aataacaaat
    16201 tgaaattttt cgtattggaa actgagtaaa gcgggatttt cattataaat aattttttgt
    16261 tccgtcagca tttgtttaat ttcgtgataa ttgcttttat ttggcagacg aaattgtact
    16321 gtatctcttc cgcaaagagc gactgtttgc tcggaaaaag gcacttctga aatcattttt
    16381 ccagttgcgc aaccagagca atcggggcgt ttcttgactt caagagaccg gaaagaaaat
    16441 tgccaattat ctagttgata gtaggtattt gatttgaaat caggattgat tatcatttgt
    16501 gtaagtaaag aaacttgcat gcccgcgaca atcggaatca gcgcaccatc cacaccgata
    16561 atatcgcaac ttgctgcgtt ggtttgggga atatcaccaa gtaaacagtg taaacaagca
    16621 gagtcgggtg gaataattgg catgagattc gcataatttc cagcacacga ggtgaaaatc
    16681 catggaattt gatggctgaa acaaaattga tttaaaaagt cgcgcgtcat aaaattatct
    16741 gtacaatcaa gtatgtaatc aattgctccg gcataaggcg ttaaacttgt tgcgttcgca
    16801 tcatcaacta tatattcgat ttcaatatcg ctattaatta attgtaacgc tttggatgcc
    16861 gcatacgctt ttgcttgttt gtctaatgca tcttgttccg tgaaaagcga ttggcgctgc
    16921 aagttactta gctccacata gtcacgatca attaaaatta actttccaaa gcccattcgt
    16981 gcacaaattt ctgcggcata tgaaccaatc gcgccaacgc caacaatcaa aatcgttttc
    17041 gtgagtaact ttttttgacc aacttttccg atgttcttaa cacgcatctg tctatcataa
    17101 cgttccaatt ttccaccttc tttccaatct tattttacca gaaaaacaca taaagcgctt
    17161 acttgtaagg ttttaattta ttcttgaaat cttagtatgg catcatttat aatgaaagaa
    17221 aaaactagag gtgctaactt tgaaacagcg catagaaaca gaaaaatttt atccagctta
    17281 tccagtcttt gtattaacgt atttgaatga ggttggagaa ccgcaaatgt caacgggatc
    17341 atcatcgtac acattaggag atagtattgt tataggcgtg tcagcagaaa gtaatgccag
    17401 caaacacttg catgctggcc aaaaatttgc agtaaatttt ccaaacacgg agcagttagg
    17461 attgattgag caagggggat tctcgtcagg aaagcgtaac gataaaataa aagttcatca
    17521 aatagaatta accaaaagtg atagtggggg agtagcttac atagatgtgt gtccgattgt
    17581 tctcgaatgc accgtgattc aaacagtttc tgacatggac tatcatacta tctttgctaa
    17641 aattgactcg cgattatttg aaaaaaattt agtggattca gatggtcatt ttattcacga
    17701 agaacttgat ttagtgctat tctcaggcga tgcaaatgaa cgtaaattca gacagcttga
    17761 tacaaaaata gaaacagttg gtggtcactc ataaagtcaa aaatccccgc aggatcttaa
    17821 ttcctgcggg gatttattca atttaaccaa acacatccac atctggtggc aagtatgatg
    17881 gattttcttt attaatatga tcataaaaca taataccgtt caaatgatcg atttcgtgtt
    17941 gaataacaat cgctggataa cctttgaaac gtaatttaag cggtgtacca ttttcgtcaa
    18001 aggcatcaat ggttacacgt tcacttcgga ccacataccc tggaacttct cggtcaacag
    18061 aaagacaacc ttcaccacca gaaagacaag cttgctgaac agaatggcta cgaatttttg
    18121 gattataaag cacataacta taaagacgat ctttttcatc atgtacatga atagctagga
    18181 aacgtttagt cacagcgagt tgtggagctg caattccaac gccaccacgc aacccatatt
    18241 tttctgctaa ctcttcatct tgactgttaa tcaggaattc gagcatctcg cgtcctaatt
    18301 ttttttcttc atctgaaagc gggaaagtca cttctgtcgc aacttctcta agtgctggat
    18361 gaccttctcg tacaatatcg tccattgtaa gcatgatttg attctctcct gttctttaat
    18421 aacttatctt tattttaaca aaagaacgaa aaaaaaggaa tgaaagatta ctagactcga
    18481 aaaaaagagt gttttaatag gtctaaaggc atatttgtta aaaaagagaa agttttaaaa
    18541 gcgaacaata acaattattt tttttataat gttcgtttaa actaaacaaa gaaaaaaatt
    18601 atatgtttgt gaattcacaa actatcgata tttgctgttt gaaagcttga aataggtgtg
    18661 gtaatgcg
//
LOCUS       DASDYK010000047        17871 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.047, whole genome shotgun sequence.
ACCESSION   DASDYK010000047 DASDYK010000000
VERSION     DASDYK010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 17871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17871
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.047"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(80..1591)
                     /locus_tag="U0308_001604"
     CDS             complement(80..1591)
                     /locus_tag="U0308_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEM2316571.1"
                     /translation="MNQSETKALEALQNGSDIRGIAIATEKYQITLTDERVEKIAYGF
                     AKWLKEEKKVEGQAKVAIGHDSRLSAERLKAALVKGLTFAGINVVDVGLATTPAMFMA
                     TQYEDYDCDAGIMITASHLPFMYNGLKLFTKSGGAEHEDIDYIVAHADKSFIENGLNL
                     GKVTKQDLLSTYAADLTDKIRAGITDAADKMKPLLGSHIIVDAGNGAGGFFAEKVLAE
                     LGADISGSQFLDPDGNFPNHIPNPDNEEAMASLKKAVLASGADLGVIFDTDVDRAAIM
                     DKNGESLNRNPLIAVISSIILEEKPGTTIVTDSTTSGHLQTFIEAKGGKQHRFKRGYR
                     NVINEALRLNADGTPSEIAIEVSGHAALKENYFLDDGAYLIAKILMTYATLRKNGKDL
                     PDLIADLREPAESEEIRLSITATDFKAYGKEVLADFLTFVEADPDMELEPVNQEGIRV
                     NTKGALGEGWFLLRMSLHEPVMPMNLESDEAGGIRKVKNRLAGFFASKAELKM"
     gene            complement(1660..2535)
                     /locus_tag="U0308_001605"
     CDS             complement(1660..2535)
                     /locus_tag="U0308_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEM2316572.1"
                     /translation="MLSKMEINKRALKENMALLACPICGEAFEFKEPQSFVCLEGHGF
                     DIAKPGYVHLLKQAHKTKYDQALFESRKKVIASGFFEKLIERVTEIIAEKKKEQLVLY
                     DAGCGEGSHLARVVSNLQATGVNVQAVGLDIAKEGVKQAARDYPGTSWTVADLANCPN
                     QAETADVILNILSPSNYVEFKRLLKKDGFLLKVVPEANYLRELREFIYVDEKSSYSNE
                     SVTSRLAEKLSVEHVERVTYKAPIAKELFADFLEMTPLGWHIEADKKSELLGNPPEEL
                     TVDLQIIIANRAHLL"
     gene            complement(2588..3070)
                     /locus_tag="U0308_001606"
     CDS             complement(2588..3070)
                     /locus_tag="U0308_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEM2316573.1"
                     /translation="MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTTGKTLVMGR
                     KTYESLGKALPNRKTIVLTRDQGLKLDDAEILHSKEAVLALAETGEPIYIVGGAEIYR
                     LFMDVADQLIVTKIDAEFEADTAFPEVDWENFSEVAKEFHEKDEKNKYNYTFYTYERN
                     "
     gene            complement(3086..4030)
                     /locus_tag="U0308_001607"
     CDS             complement(3086..4030)
                     /locus_tag="U0308_001607"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEM2316574.1"
                     /translation="MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPI
                     MTTKRVPFKLVVSELLWFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDF
                     GLRAERDSAFKEVYQAEMEKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETID
                     QLADLIEMIKTNPNSRRLIVSAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSA
                     DIFLGVPFNIASYALLTHLIAREVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHK
                     LPKLVLSDKPATIFDFDVADISLDGYNPDPAIKAPISV"
     gene            complement(4043..5935)
                     /locus_tag="U0308_001608"
     CDS             complement(4043..5935)
                     /locus_tag="U0308_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM2316575.1"
                     /translation="MKQLKVENLTKTYGGKSLFENISLTITEGERIGLIGVNGTGKST
                     LLQIISGSESGDKGTVTKAKDYTIGYLAQDPEFNEEDTVLSAVFDGDTAALRAMRKYE
                     EVLLAMSLDAENTKLHDAYTAASQEMDASAAWDMNTEAKTILERLGITDLTAKISELS
                     GGQRKRVGLAQVLIETPDLLILDEPTNHLDFQSIRWLEEYLNRFKGAVLLVTHDRYFL
                     DRVTNHMVELDRGSAYRYVGNYEKFMESKAIRMENEVRESEKNKNLYRKELAWMRRGP
                     QGRATKQNARQDRFHDLEKKVKTKTDDSELAIDFVTSRLGKDVFELKNLEKRFDEKQV
                     LQDFSLIIQPGERLGITGNNGTGKSTLLNMLAGKLAPDAGEVVTGQTVQIGYYTQQNE
                     EMDPDMRMIAYLQEAGEQVTTSGGEVISVSAMLERFLFPPNSHGKKIGSLSGGEKRRL
                     FLLRILMERPNVLLLDEPTNDLDTQTLTVLEDYLESFNGTVITVSHDRYFLDKVVNKL
                     LVFRAIGEVEIFYGEYSDYLKELEAKAKPAKSMKKMANTSVEKAAPEKKEKVKLTYQE
                     QLEWDGIEDAISELEQTIESLNETLEQTGADFTKAAEISELITAKETELEQMMERWEF
                     LSQYAE"
     gene            complement(6055..7737)
                     /locus_tag="U0308_001609"
     CDS             complement(6055..7737)
                     /locus_tag="U0308_001609"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009928213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEM2316576.1"
                     /translation="MSNKVKSDIEIASKAEILPVTTIAEHLGLDADALELYGKYKAKL
                     SYDTIHSLKDKEPGKLVLVTAINPTPAGEGKSTVTVGLGDALSKKDKKTVIALREPSL
                     GPTMGIKGGATGGGYAQVIPMEDINLHFTGDFHAITAANNALSAFIDNHMQQGNDLDI
                     DGRRIVWKRVVDLNDRALRKVVVGLGGPIQGVPREDGFDITVASEIMAIICLASDLKD
                     LKKRLSEIVIGYNYKKEPITVGEMGYEGALTLLLKDALKPNLVQTLEHTPAIVHGGPF
                     ANIAHGCNSVSATSTALRLGEYVVTEAGFGADLGAEKFLDIKVPALGKAPDCVVIVAT
                     IRALKMHGGALKTELSEENVDALAKGFTNLQKHTESIQTFGIPYVVAINKFITDSDAE
                     VAKLEALCKEHGIPFSLTEVWEKGGDGGLELADKVIAAVESGEADYKRIYDDAWSMEE
                     KLEAIVTKVYGGIGVELSSKAQKQIVEFKKYGWDRYPICMAKTQYSLSDDPTLLGRPT
                     DFVIHIREFIPKLGAGFVVALTGDVMTMPGLPKKPAALNMDVDENGNAQGLF"
     gene            complement(7895..8323)
                     /gene="mntR"
                     /locus_tag="U0308_001610"
     CDS             complement(7895..8323)
                     /gene="mntR"
                     /locus_tag="U0308_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MntR"
                     /protein_id="HEM2316577.1"
                     /translation="MPTPSMEDYIEKIYSLIETKGYARVSDIADELFVHPSSVTKMVQ
                     KLDKDEYLIYEKYRGLILTPKGTQMGKRLLERHALLESFLSIIGVDPSHIYHDVEGIE
                     HHLSWNSIDRIGDVVQFFENHPDALKTLKAMETTKPETKE"
     gene            8688..8888
                     /gene="cspD"
                     /locus_tag="U0308_001611"
     CDS             8688..8888
                     /gene="cspD"
                     /locus_tag="U0308_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein CspD"
                     /protein_id="HEM2316578.1"
                     /translation="MQNGKVKWFNNEKGYGFIESDGGEDIFVHFTAIQGDGYKSLEEG
                     QAVTFEVVEGNRGAQAANVEKA"
     gene            9012..9413
                     /locus_tag="U0308_001612"
     CDS             9012..9413
                     /locus_tag="U0308_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI family protein"
                     /protein_id="HEM2316579.1"
                     /translation="MEVFVDGASAGNPGPSGAGIVLKAEGIYEQFAIPLAVMTNHEAE
                     FIAIKLGLEEAIKKQATLIRLYSDSKVAIEAIHKRHAKNPLFKPHLEAILEMADSFEL
                     FFAEWRNVSQNKQADQLARQAIKKQKQPGVK"
     gene            complement(9432..10304)
                     /locus_tag="U0308_001613"
     CDS             complement(9432..10304)
                     /locus_tag="U0308_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease"
                     /protein_id="HEM2316580.1"
                     /translation="MTENRENLLVVDGMALLFRAFYATAVSKQFMFNQHGIPTNGVQG
                     FMRHMFAAIRQSNPTHTLICWDMGSQTFRNELYDGYKTGRTAPPEEMIPQFDLAKEVA
                     AGFGFVNLGVPGFEADDCIGTITVQASNTIATTVLSGDKDLLQLIAPTNDVWIMQKGY
                     GNYKRYDEATFFEEMGISPRQFIDVKALMGDTSDGYPGVRGIGEKTAIKLIQEFESIE
                     GVLNNLDKLKPAQQTKIQEDLAMLELSQKLARIHTEVPLEIDLPSLKYDGFREDAFAV
                     VEKYGLKTLTRDIE"
     gene            complement(10382..10651)
                     /gene="rpsN"
                     /locus_tag="U0308_001614"
     CDS             complement(10382..10651)
                     /gene="rpsN"
                     /locus_tag="U0308_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEM2316581.1"
                     /translation="MAKKSKVAKHERQQALVEKYAELRRTLKAEGRYDELRKLPRDSS
                     PSRLHNRCELTGRPHGYMRKFGMSRIRFRELAHQGQLPGVTKASW"
     gene            complement(10774..11832)
                     /gene="chiA"
                     /locus_tag="U0308_001615"
     CDS             complement(10774..11832)
                     /gene="chiA"
                     /locus_tag="U0308_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitinase ChiA"
                     /protein_id="HEM2316582.1"
                     /translation="MNGKQVMVGGLSLLLVGAGLGAFGSTAQAATDDASVMPDISNKQ
                     VLVGYWHSWKSSGNDGYQQGTSADIALKDTPKAYNVVDVSFMKGDGVNRIPTFKPVGI
                     NDSDFRAQVGALNKEGRAVLLALGGADGHVELKAGDEEAFANEIIRQVETYGFDGLDI
                     DLEQSAITAGDNKTVIPAALKIVKDHYKAEGKNFLITMAPEFPYLKPGSAYESYLTSL
                     ANYYDYIAPQLYNQGGDGVWVDETNQWIAQNNDTLKESFLYYMADSFINGTRGYLKIP
                     ANKFVFGLPANVDAAATGYVKDPQIVKNVFTRLQAKGTPVKGIMTWSVNWDAGKNKAG
                     VPYSNGFSNAYGPIVGTK"
     gene            complement(12024..13331)
                     /locus_tag="U0308_001616"
     CDS             complement(12024..13331)
                     /locus_tag="U0308_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HEM2316583.1"
                     /translation="MLGKGKIAALGFQHVLAMYAGAVIVPLLIGGALGFNGEEMTYLV
                     SIDIFMCGIATLLQLTVNRFFGIGLPVVLGCAVQAIAPIILIGQDMGIGAIYGSIIVS
                     GLFVLLIAPFFSKVVRFFPPVVTGSVVTVIGLTLIPVAINNLAGGEGAKDFGSMYNLG
                     LGFGTLLLIILVYRFGQGFSKAIAVLIGLVGGSLFAALYKGISLGPVSEASWFHMPKP
                     FYFGTPTFEWPAIITMILIALVSMVESTGVYFALSDITERKLTQKDLTRGYRAEGLAI
                     MLGGVFNTFPYTAYSQNVGLVQLSGIKTRKVIYAAAGFLIVLGLIPKIGAVTTIIPTP
                     VLGGAMVAMFGMVVAQGIKMLGKVNFTSQENLLIIACAVGVGLGVTVVPDLFNAFPSF
                     VRLFTSNGIVAGSVTAITLNIIFNMIPHRKDKKVADPEPQHAK"
     gene            complement(13338..13916)
                     /locus_tag="U0308_001617"
     CDS             complement(13338..13916)
                     /locus_tag="U0308_001617"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HEM2316584.1"
                     /translation="MKLLEEFIQEKGTVLPGNVLKVDAFLNHQIDPVLMQAMGNEFAK
                     RFQDLGITKIVTIESSGIAPAVFAGLALSVPVVFARKKKSVTLTDNLFTSTVYSYTKK
                     ESNDISVSKQFLTADDTILVIDDFLANGQAALGLLEIAEHAGAKVAGIGIVIEKSFQQ
                     GRELLNKTGIPVYSLARIASLENEEILFLEEE"
     regulatory      complement(13998..14098)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00167"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="purine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="guanine and/or adenine"
                     /db_xref="RFAM:RF00167"
     gene            complement(14144..15652)
                     /locus_tag="U0308_001618"
     CDS             complement(14144..15652)
                     /locus_tag="U0308_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase M32"
                     /protein_id="HEM2316585.1"
                     /translation="MVETLEEEFLAYIKKMEALEEALALVYWDLRTGAPSKGMEGRSD
                     VIGVLSEEIFNMQTSEEMAAFIAGLNLDKENLSEITLKTLEESQKKYDLNKKIPSKEY
                     AEYTKLVAQAETAWTTAREQNDFAAFEPFLTKILEMKRKFVEYWGYEENKYDTLLDQY
                     EPGVTVSVLDSVFEKVRDGIMAIREKIANEGVKPDATILNTKISEAKQKEFSIRILNK
                     MGFDFEAGRLDETVHPFATGLNTGDVRITTRYNENDFKMAVFGTIHEGGHAIYEQNFD
                     AALVGTPLANGASMGIHESQSLFYEIIIGSSLAFWKSNYADFQAITKPAFDHVTLEDF
                     YRAVNISESSLIRIEADTLTYPLHIMIRYELEKALINGELEVKDLPKAWGDKYEEYLG
                     IRPDNDTNGVLQDIHWAGGDFGYFPSYALGLMYAAQFFNQMQKEIPNIDAIIASDDYS
                     ELKTWLTEHVHKFGKTKKPLEILTDTTGEGLNPTYLLDLLEKRYAYVYQFNK"
     gene            complement(15672..16820)
                     /locus_tag="U0308_001619"
     CDS             complement(15672..16820)
                     /locus_tag="U0308_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEM2316586.1"
                     /translation="MKSFQLVATAASGLEAIVGKEVARLGYDPKVENGKVYFEGDLSA
                     IARANLWLRVADRVKIVVGVFKATTFDELFEKTKALPWEDYLPLDAQFPVAGKSVKST
                     LYSVPDCQAIVKKAIVNRVSEKYRRSGRLMETGALFKLEVSILKDEVTLTIDTSGAGL
                     HKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPG
                     FNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAG
                     LGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWS
                     VYVLTSYELFEEVYGKKATKKRKLYNGYLRTDLYQYWGPRKPRPKKED"
     gene            complement(16982..17363)
                     /gene="rnpB"
                     /locus_tag="U0308_001620"
     ncRNA           complement(16982..17363)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="U0308_001620"
                     /product="RNase P RNA component class B"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00011"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00011"
     gene            complement(17400..17741)
                     /gene="gpsB"
                     /locus_tag="U0308_001621"
     CDS             complement(17400..17741)
                     /gene="gpsB"
                     /locus_tag="U0308_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division regulator GpsB"
                     /protein_id="HEM2316587.1"
                     /translation="MTSEQFEYHLTGKEILEKEFKTGLRGYSPEDVDEFLDMVIKDYS
                     TFTQEIEALQAENIRLVQELDNAPLRTSTQPAPTFQAAAQPAGTTNFDILKRLSNLEK
                     HVFGNKLDDNE"
BASE COUNT         5086 a         4056 c         3034 g         5695 t
ORIGIN      
        1 tactgtacta tgcagctagc attatttaga actcaaagca tattaaaaag cagccaaaat
       61 atatcagctg ctttgtagtt tacatcttta attctgcttt actcgcgaaa aatcctgcta
      121 aacgattttt cacttttcgg atgccgccag cttcatcact ttctaaattc atcggcatta
      181 ccggttcatg taagctcatt cgtagtaaga accagccttc accaagcgca cctttcgtat
      241 tcacacgaat tccttcttgg ttcacaggtt ctaattccat atccggatca gcttctacga
      301 aagtcagaaa atcagctaga acttcttttc cataagcttt aaaatcggtt gcggtaatac
      361 tcaaacgaat ttcttcgctt tcagccggtt ctcttaaatc ggctattaaa tctggcaaat
      421 cttttccatt ttttcgtaaa gtggcataag tcattaaaat tttggcaatg agatatgcgc
      481 catcatccaa gaaataattt tcttttaatg cggcatgacc acttacttcg atagcaattt
      541 ctgatggtgt tccgtctgca tttaggcgca gtgcttcatt gataacatta cgataaccac
      601 gtttaaatcg gtgttgtttc ccgccttttg cttcgataaa ggtttgcaaa tgcccagatg
      661 ttgtggagtc agtcacgata gttgttcctg gtttttcttc taaaataata ctagagataa
      721 cagcaattaa tgggttgcgg tttaaacttt cgccattttt atccataatc gcagcacggt
      781 ctacatccgt atcaaaaatc acgcctaaat ccgctccact agcaaggacc gcttttttca
      841 aactagccat agcttcctca ttgtcagggt tcggaatatg attaggaaaa tttccatccg
      901 gatctaaaaa ctggcttcca gaaatgtctg cgccaagttc tgccaatact ttctcagcaa
      961 aaaagccgcc agcgccgttc cctgcatcga caataatatg gcttcctaga agtggcttca
     1021 ttttgtcagc tgcatctgtg attccagctc taattttatc cgttaagtct gctgcatatg
     1081 tagaaagtaa atcttgtttt gttaccttcc caagatttag tccattttct atgaatgatt
     1141 tatctgcgtg agccacgata taatcaatat cttcgtgttc agctccacca gatttcgtaa
     1201 ataattttag tccattatac ataaaaggta agtggctcgc tgtaatcata atgccggcat
     1261 cgcagtcata gtcttcgtac tgagttgcca taaacatggc cggcgtagtt gcaagcccta
     1321 catccaccac attgattcct gcaaaagtta accctttgac aagtgccgct tttaaacgtt
     1381 cagctgaaag tctgctatca tggccaattg ccactttcgc ttgaccttcc acttttttct
     1441 cctcttttag ccatttcgca aagccataag caatcttttc tacacgttcg tctgttagcg
     1501 taatctgata tttttccgta gcaatagcta ttccacgtat gtctgatccg ttttgcagtg
     1561 cttctaacgc tttcgtttct gattgattca tgtcattcct ccagcttctg tatttttccc
     1621 cttcattata gcttaaattg cgaaattttc acatagcttt tacaaaagat gtgctctatt
     1681 cgcgataata atttgcaagt caacggttaa ttcttccggt gggtttccca gtaattcgct
     1741 ttttttatcc gcttcaatat gccaaccaag tggcgtcatt tcaagaaaat ctgcaaataa
     1801 ttctttggca atcggcgctt tgtaggtcac tcgttcgaca tgttctacgc ttaacttttc
     1861 tgctaatcgt gatgtgaccg actcattcga ataactactt ttctcatcaa cataaataaa
     1921 ttcacgtaat tcgcgtaaat aattcgcttc tggcactact tttaacaaaa acccatcctt
     1981 ctttaaaagc cgtttgaact ccacgtaatt cgatggcgat aaaatattta aaatgacatc
     2041 cgccgtctct gcttgattcg ggcaattggc taaatcagct accgtccaag aagtaccagg
     2101 atagtcgcgt gccgcttgtt tcactccctc tttggcgata tctaagccaa ccgcttggac
     2161 attaacacca gtcgcttgta aatttgatac gactcgcgcc aaatgacttc cttccccgca
     2221 acccgcatca tataaaacaa gttgttcttt tttcttctcc gcaataattt ctgtcactcg
     2281 ttcgattaat ttttcaaaaa agccactcgc aatcactttt ttacgggatt cgaataatgc
     2341 ttgatcgtat tttgttttat gcgcttgttt tagtaaatgt acgtaacctg gtttggcgat
     2401 atcaaacccg tgaccttcta ggcatacaaa tgactgcggc tctttaaact cgaatgcttc
     2461 gccacaaatc ggacaagcaa gaagcgccat attttctttc aaagcgcgtt tatttatctc
     2521 catttttgat aacaattaat actcactcca ctcgaaaaac gttgcccgca aacaggcaac
     2581 gtttctacta atttctttca tacgtataaa aagtgtaatt gtacttattt ttttcatctt
     2641 tttcatggaa ttctttcgcc acttcggaaa aattctccca atccacttca ggaaacgcag
     2701 tatcagcctc aaactctgca tcaatttttg tcacaatcag ctgatccgcc acatccataa
     2761 ataaacgata gatttctgca ccaccaacta tatagattgg ttcccccgtc tcagcaaggg
     2821 ctaaaacagc ttcttttgaa tgaagtatct ctgcatcatc taacttgaga ccttgatctc
     2881 gtgtcaatac gattgtcttt ctatttggta aagcttttcc taacgattca taggtttttc
     2941 gccccatgac aagtgttttc ccagtcgtcg tttttttgaa aaactgcaaa tctcccggta
     3001 agtgccacgg cattttgtta tcttttccaa tattaccagc gcggtcttgt gcccaaacaa
     3061 aaataatcat ccaagaaaac ctcccttata ctgaaattgg tgctttaatt gctggatctg
     3121 gattataacc atccagtgaa atatccgcta catcaaaatc aaaaatcgtt gctggtttat
     3181 ctgaaagcac taattttgga agtttgtgcg gtgttctaga cagctgttct ttcacttgct
     3241 caatatgatt gttataaaga tgcgcatcac ccatagtatg gataaactcg ccaacttcca
     3301 gccctacttc acgtgcaatc aggtgtgtta gaagtgcata gcttgcaata ttaaacggta
     3361 caccaaggaa aatatcggca ctacgttgat acagctgaca tgataatttt ccgtccgcta
     3421 cataaaattg gaatagcgaa tgacatggcg gtaaagccat attcggaata tcttctggat
     3481 tccaagcaga cacaatcaaa cgacgcgagt tcggattcgt tttaatcatt tcaatcaaat
     3541 ccgctaactg atcaattgtt tctccttgtg aagtcttcca ttcgcgccat tgtttaccgt
     3601 aaatattacc tagctcaccg tatttattcg cgaacgcttc gtcttctaaa atccgagctt
     3661 taaacttctc catctccgct tgatacactt ctttgaaagc tgaatcacgc tcagcacgca
     3721 gtccaaagtc agtcatatct tcgcctttat aatcatcgct tttcacaaaa cgctcaaaag
     3781 cccattcatt ccaaatatta ttattatgct gtaaaaggta gcgaatattc gtatctccat
     3841 gtaaaaacca tagcagttca cttactacaa gtttaaatgg tacccgtttt gttgtcataa
     3901 tcggaaagcc ctcttgtaaa tcaaaacgca tttgataacc aaatgtgctg attgttccag
     3961 ttccagtgcg atctcctttt tgtgttccat tctctaaaac gtacttttct aaatccaaat
     4021 attgtttcat cgttcgcact ccttattccg cgtattgtga taaaaattcc cagcgttcca
     4081 tcatttgttc gagctccgtt tcttttgccg tgatgagttc gctaatttct gctgcttttg
     4141 taaagtctgc tccggtttgt tccaatgttt cattaagcga ttcaatggtt tgttctaatt
     4201 cactaatggc atcttcaatt ccgtcccact cgagttgttc ttggtaggtg agtttaactt
     4261 tctctttttt ctcaggtgct gccttttcga ccgaagtatt cgccattttt ttcattgatt
     4321 tcgctggttt tgctttagcc tccagctctt tcaaataatc actatattca ccgtagaaaa
     4381 tttctacttc accaattgct cggaaaacga gcaatttgtt tacgacttta tcgaggaaat
     4441 atctatcatg gctaaccgta attacggtac cattgaatga ttctaaatag tcttctaata
     4501 cggttaatgt ttgcgtatct aagtcattag tcggctcatc cagtaataag acatttggtc
     4561 gttccatcaa aatgcgaagt aagaataacc gtcgtttttc tccacctgat aagctaccaa
     4621 ttttcttccc gtgggaattt ggtgggaata aaaatcgttc taacatcgca ctcacactga
     4681 ttacttcgcc accagaagtt gtgacttgct ctcccgcttc ttgcaaataa gcaatcattc
     4741 gcatatccgg gtccatttct tcattttgtt gcgtatagta accgatttgt acggtttgac
     4801 ctgtgactac ttccccagca tctggtgcta gttttccagc caacatgttc agtaaagtcg
     4861 attttccagt tccgttgttc cctgtaatac caaggcgttc accaggttgg ataatcaagc
     4921 tgaaatcctg caatacttgt ttttcatcaa agcgtttttc caagtttttc agttcgaaaa
     4981 catcttttcc aagacgacta gtaacaaaat caatcgccag ttctgagtca tcggtttttg
     5041 ttttcacttt tttctctaaa tcgtggaaac ggtcttgtct ggcattttgt ttagtggcgc
     5101 gaccttgagg accgcgacgc atccatgcta gttccttacg ataaaggttt ttatttttct
     5161 cagattcacg gacttcgttt tccatccgaa tggctttaga ttccatgaat ttctcgtagt
     5221 tcccaacgta tcgataagcc gaaccccggt cgagctccac catgtgattt gtcactcggt
     5281 caagaaaata acgatcatgg gtaacaagca agacagcccc tttaaagcga tttaaatatt
     5341 cttccaacca acgaattgac tgaaaatcca agtggttggt aggctcgtcc aaaatgagta
     5401 aatctggcgt ctcgattaag acttgcgcca aacctacccg ttttcgttgc ccaccagaaa
     5461 gctcgcttat tttcgcggtt aaatctgtaa ttcctaaacg ctccaaaatc gttttcgctt
     5521 ctgtgttcat atcccaagcc gcactagcat ccatttcttg gctggcggct gtataagcat
     5581 cgtgtaattt ggtattttcc gcatcaagtg acatcgcaag taacacttct tcgtacttgc
     5641 gcattgcccg aagcgccgca gtatccccgt caaaaacagc cgaaagaact gtatcttctt
     5701 cattaaattc aggatcttgc gccaaataac caatcgtata atcttttgct ttcgtaacag
     5761 tacctttatc cccagattca ctaccagaaa taatttgcaa taacgtcgat ttcccggtac
     5821 catttacacc gattaaacca atacgttcgc cctctgttat cgttagcgag atattttcaa
     5881 acaggctttt tccaccatat gtttttgtta aattttccac ttttaattgt ttcatttagt
     5941 cccatccatt tcctgttcgt ccttatctat tctagctgaa aacatagaac atagcaattg
     6001 cttaagatga aaaaagttcc aaaagcggct cttccacttt tggaactttt acttttaaaa
     6061 taaaccttgt gcattcccat tttcatcgac atccatatta agtgccgctg gttttttcgg
     6121 taaacctggc atcgtcatta catcgcctgt taaagcaacg acaaaaccag caccaagttt
     6181 tggaatgaat tcgcgaatat gaataacaaa atcagttggg cgtccaagta atgttgggtc
     6241 atccgataag gaatattggg ttttcgccat acaaatcgga taacgatccc aaccatattt
     6301 tttgaattca acgatttgtt tctgcgcctt gctggaaagt tccacaccaa taccgccgta
     6361 tactttcgtc acaatcgctt ctagtttttc ttccatcgac cacgcatcat cataaatgcg
     6421 tttgtagtcc gcttctccac tttcaacagc cgcaatgact ttatccgcga gttcaaggcc
     6481 accgtcgccg cctttttccc aaacttctgt cagagagaaa ggaatcccgt gttctttgca
     6541 gagcgcttct aatttcgcta cttctgcgtc agaatcggta atgaatttgt taatggctac
     6601 gacataagga ataccaaatg tttgaataga ttcggtatgt ttttgtaaat tcgtaaaacc
     6661 tttagctagc gcatccacat tttcttcgct aagctcggtt ttcaaagcgc caccgtgcat
     6721 tttcagtgcg cgaatcgttg ctacaataac aacgcaatct ggcgcttttc caagggcagg
     6781 aactttaata tctaaaaatt tctcggcacc aaggtctgca ccaaatccag cctctgtcac
     6841 tacatactca cctagtcgaa gtgctgtgct tgtcgcagaa acactattac atccgtgagc
     6901 aatattcgca aaaggtccac catgtacaat ggcgggtgta tgttctaatg tttgcaccaa
     6961 attaggtttt aaagcatctt ttaatagtaa ggttagagcg ccttcgtagc ccatttcgcc
     7021 aactgtaatt ggttcttttt tatagttata accgatcacg atttcactta aacgtttctt
     7081 taaatctttt aaatcacttg ctaaacaaat gatcgccata atttcagaag caaccgtaat
     7141 atcaaaaccg tcttcacgtg gaaccccttg aataggacct ccaagaccaa caaccacttt
     7201 tcgaagtgca cggtcgttca aatcaactac acgtttccaa acgattcttc taccgtcaat
     7261 atctaggtca ttcccttgtt gcatatggtt atcaataaat gccgataaag cattgtttgc
     7321 tgctgtaatc gcgtgaaaat caccagtaaa atgtaaatta atatcttcca ttggaataac
     7381 ctgcgcgtat ccgccacctg ttgccccgcc cttaataccc atggtaggtc cgagcgatgg
     7441 ttcgcgaagt gcaataacgg ttttcttatc ttttttagag agtgcgtcgc caagaccaac
     7501 tgtcactgtc gatttccctt caccagcagg cgttgggtta atcgccgtaa caagaacaag
     7561 ttttcctggt tctttatctt ttagcgagtg aatggtatca taggataact ttgctttata
     7621 ctttccgtaa agttcgagtg catctgcgtc tagtcctaaa tgttccgcaa tagtcgtaac
     7681 tggtagaatt tctgcttttg atgcaatttc aatatctgat ttcactttat ttgacatgat
     7741 atcccctccg aatatgtata ttgtaacaaa gaattaagat gttttggctt ctttagtgca
     7801 tcaaaaaagc gcgacaccaa gcgatgtaac accattttga ttctaaagta aagcctgatt
     7861 gcgcaaaaat caacatctca accttggatt accgttattc ctttgtttct ggtttggtcg
     7921 tctccatcgc cttgagcgtc ttcagtgcat ccggatgatt ttcaaaaaac tgaacaacat
     7981 ctccaattcg gtcaatcgag ttccagctca agtggtgttc aataccttcc acatcatgat
     8041 aaatatggga cggatctacg ccaataatac ttaaaaaact ctctaataat gcatgtcttt
     8101 ctaggagcct tttccccatt tgtgttcctt taggcgtcaa aattaatcca cgatatttct
     8161 catagattaa atattcgtct ttatccagtt tctgcaccat ttttgttaca gaggaaggat
     8221 ggacaaatag ctcatcagca atatccgaaa ccctggcata acctttcgtc tcaataaggg
     8281 aatagatttt ttcaatataa tcttccatac taggtgttgg catagctata ccctccaact
     8341 taaattcttt cacatagcca attgtactat aatatcgccc tttctaaaag caattaccct
     8401 ttcgaaaacg aaatttctcc tagagcggtc ttccgaaaaa aaaccgtaat tagtaccaat
     8461 ttaagacatt taagtcaaaa gtatgccctt acaagtccaa aaatttaaaa aatatcgaaa
     8521 atcagcttga cgtttatagg tattttgatt tatagtgtta gtatcatatg cggcaacgct
     8581 atgaactgaa aaggtagtat ttgcgagaaa tttttttaag ttaaaatgaa agcgttttaa
     8641 caaatgattc tagcaattat tagccatact taggaggatt tatttcaatg caaaatggga
     8701 aagtaaaatg gtttaacaat gaaaagggtt acggttttat cgaatcagac ggcggcgaag
     8761 atattttcgt tcacttcaca gcgatccaag gtgatggcta caaatcttta gaagaaggcc
     8821 aagcggtaac atttgaagta gtagaaggta atcgcggcgc tcaagcagcc aatgtagaaa
     8881 aagcctaatc cagttgccaa atagacacgg acttaaaacc ggtatccttt taccggtttt
     8941 tttattgcaa aaaaatagct ttccttctat aataaagcca catctattca tctaaatagg
     9001 aggcacataa tatggaagtt ttcgtcgatg gtgcaagtgc tggaaatcct ggaccaagtg
     9061 gggctggaat cgtcttaaaa gcagaaggta tttatgaaca attcgccatt ccgctcgcag
     9121 ttatgacgaa tcatgaagca gaatttattg cgattaaact cggactggaa gaagccataa
     9181 aaaaacaagc tacattaatt cgtctatact cagattcgaa agttgcaatc gaagcaattc
     9241 ataaacgaca tgcgaaaaat cctttattca agccgcattt agaagcaatt ttagaaatgg
     9301 ccgattcatt tgaattgttt tttgctgaat ggcgtaatgt aagtcaaaat aaacaagccg
     9361 accaacttgc gcgccaggct ataaaaaaac agaagcaacc tggagtcaaa taaccagatt
     9421 gcttctgttt tttattcgat atcgcgcgtt aacgttttta aaccgtattt ttcaactaca
     9481 gcaaaagcat cctcgcggaa accgtcatat ttcaagctag gcaagtctat ttctagtggg
     9541 acttctgtat gaatccgagc taatttttga cttaattcta gcatcgctaa gtcttcttgg
     9601 attttggttt gttgcgctgg tttcagttta tcaaggttgt tcaagacgcc ttcaatagac
     9661 tcaaattctt gaataagctt aatcgctgtt ttttcaccga ttccacgaac acccggataa
     9721 ccatctgaag tatcgcccat taatgctttc acatcaataa attgtcttgg agaaataccc
     9781 atctcttcaa aaaatgtcgc ttcatcatat cgtttataat tgccataacc tttttgcata
     9841 atccagacat cattcgtcgg tgcgattagt tgcagtaaat ctttgtcgcc acttaaaaca
     9901 gttgtagcaa tcgtattact cgcttgaacg gtaattgtcc caatacaatc atctgcttca
     9961 aaacccggca cacctaaatt gacaaagcca aatccagcag ctacctcttt cgctaaatca
    10021 aactgcggaa tcatttcttc tggtggcgct gttctgcctg ttttataacc atcatataat
    10081 tcatttcgaa atgtttgcga ccccatatcc cagcaaatta gtgtatgcgt tgggttactc
    10141 tggcgaatcg ctgcaaacat gtggcgcata aaaccttgca ccccattcgt cgggattcca
    10201 tgttggttaa acataaattg tttggaaacg gctgttgcat aaaatgctcg gaaaagtagt
    10261 gccattccat caacaacgag caaattttct cgattttcgg tcatatataa tcctccaatt
    10321 tccttctact gccatctatt gtagcataat tataactggc tcgcagaaaa aaaggagctt
    10381 tttaccagct tgcttttgtc acgccgggta attgtccttg atgtgctagt tcacgaaaac
    10441 gaatccgcga cataccaaat ttacgcatgt agccgtgggg acgtccagtt agttcacaac
    10501 gattgtgtag ccgggacggg gaagaatcgc gtggtaattt gcgtaattca tcgtagcggc
    10561 cttctgcttt tagcgttcgg cgaagttccg catatttttc cacgagcgct tgttgacgtt
    10621 catgtttggc aacttttgat tttttagcca tgtgtctctc ctttcttaaa taataatcat
    10681 tacgatttac atcatacgcc gatttaatta ggaaagcaag tcttctgttt taaaaaaacc
    10741 gatatccagt taaactgaat atcggttgtc ctattattta gttccaacta tcggaccata
    10801 cgcgttagag aaaccattac tataaggcac tcctgcttta tttttacctg catcccagtt
    10861 caccgaccaa gtcataatcc ctttcactgg tgtgcctttt gcttgtaaac gagtgaaaac
    10921 atttttgacg atttgcggat cttttacata accagttgcg gctgcatcca cattggctgg
    10981 taaaccgaac acgaatttat tagctgggat tttcaagtaa ccacgagtcc cattaataaa
    11041 ggagtccgcc atataatata agaaagattc ttttaatgta tcattatttt gcgcaatcca
    11101 ttggtttgtt tcatcaaccc aaacaccatc gccaccttga ttgtatagtt gtggcgcaat
    11161 atagtcataa taattagcaa gtgaggttag gtagctttca taggcactac ctggttttaa
    11221 ataaggaaat tctggtgcca tcgtaattag gaaatttttc ccttccgctt tataatgatc
    11281 tttaacgatt tttagcgctg ctgggataac cgttttatta tctcccgcgg taatcgcact
    11341 ttgttctaag tcgatgtcta atccatcaaa gccatatgtt tctacttggc ggataatttc
    11401 attcgcgaac gcctcttcat ccccagcttt tagttccacg tgtccatctg ctccacctag
    11461 tgccaaaaga acggcccgac cttctttatt taatgcgccg acttgcgccc tgaaatcgct
    11521 atcatttatt cccactggtt taaatgtcgg aatgcgattt accccgtccc ctttcataaa
    11581 ggaaacatct accacgttat aagctttcgg tgtatctttt agggcgatat cagccgaagt
    11641 cccttgttga tagccatcat ttccggaaga tttccaacta tgccagtacc caactagcac
    11701 ctgtttgtta gaaatatctg gcattacaga agcgtcatcc gtcgccgctt gtgctgtact
    11761 gccaaatgcc cccagtcccg caccaactaa aagtaaagac aaaccaccaa ccattacttg
    11821 ttttccattc atctactttt cccccttact ttatctaccc caagcttgct tttttggagc
    11881 tactagaaaa tacccatcat aatgaaaata aaactagaaa aacagcaaaa aagcgaaatt
    11941 gatatagacc aatttcgctt tcaaataaat gaatgtgtat aagtaaccga gaaaaaatag
    12001 cccaattaaa actgttttat tttttacttc gcatgttgtg gttctggatc tgctactttt
    12061 ttatctttgc gatgtggaat catattgaaa atgatattca gtgtaattgc tgtcacactg
    12121 cccgcaacaa ttccattact cgtaaataag cgaacaaagg atgggaaggc attgaacaaa
    12181 tctggtacga ctgtaacgcc taaaccaaca ccaactgcac acgcaatgat taacaagttt
    12241 tcttgagaag tgaaattaac ttttccaagc atcttaatcc cttgtgcgac aaccatgccg
    12301 aacatcgcga ccatagcgcc gccgagaact ggtgtcggaa taatcgttgt cactgcgcca
    12361 atttttggaa tcagaccaag aacaataagg aaaccagctg ccgcataaat cactttacgt
    12421 gttttaatac cagaaagttg aacgagtcca acgttttgcg aataagccgt ataggggaat
    12481 gtattaaata cgccgccaag cataatcgca agcccttctg cccggtaacc acgcgttaaa
    12541 tctttttgcg ttaatttgcg ttcggtaata tcagataaag cgaaatatac tcccgttgat
    12601 tccaccatgc tgacaagcgc aattaaaatc atcgtaataa ttgccggcca ctcaaaggtc
    12661 ggtgtgccaa aataaaatgg ttttggcata tggaaccaac tcgcctcact cacaggacca
    12721 agcgagatcc ctttataaag cgctgcaaaa agcgaaccac caaccagacc aattaaaaca
    12781 gcaatcgcct tcgaaaaccc ttgtccaaaa cgatacacta aaataattaa aagtaatgtt
    12841 ccaaaaccaa ggccgagatt atacattgag ccaaaatctt ttgctccttc tccaccagca
    12901 agattattaa ttgcaacggg aataagtgtt aaaccaatca ctgttacaac cgaaccagtc
    12961 acaacaggag ggaaaaatcg tacaactttg gagaaaaatg gtgctattaa taatacaaaa
    13021 agtcctgaaa caataatcga accgtaaatc gcgccaatgc ccatatcttg tccaattaaa
    13081 ataatcggcg caatagcttg aaccgcacat ccaagtacaa ccggtaaacc aattccaaag
    13141 aagcggttaa ccgttaattg tagcaatgtc gcaatcccgc acataaaaat atcaatcgaa
    13201 actaagtaag tcatttcttc tccattaaaa cctagtgctc caccaattaa tagtggaacg
    13261 attactgctc ctgcatacat tgctagaaca tgttgaaatc ctaaagctgc aattttccct
    13321 ttacctaaca tttactccta ttcctcctct aaaaataaga tttcttcgtt ttcaagtgag
    13381 gcaattcgtg ctagtgaata aactggaatc cctgttttat ttaataattc gcgaccttgt
    13441 tggaaagatt tttcaatcac aataccaatt cccgccactt ttgctccggc atgttctgca
    13501 atttcaagta agccgagtgc cgcctgacca tttgctagaa aatcatcaat aactaaaatc
    13561 gtatcatctg ctgttaaaaa ttgttttgat acagaaatat cattcgattc ttttttagta
    13621 tacgaataga cagtgcttgt gaataaattg tccgttaatg tcactgattt tttcttgcgg
    13681 gcaaacacga ctggtacgga aagcgcgagc cctgcaaaaa cggcgggtgc gatacccgat
    13741 gattcaatcg ttacaatttt cgtaatccct aaatcttgga accgtttagc aaattcattt
    13801 cccatcgctt gcattaaaac cggatcaatt tgatgattta aaaaagcatc tacttttaaa
    13861 acattccccg gtaaaaccgt acctttttct tgaataaact cttccagtaa tttcaaaacg
    13921 attctccttt caaaataaaa aaactgcttc tctaaaaata gagaagcagt atagaagcca
    13981 ccaattttcg gagtgacttc tttatacaaa ctactcatag tccggttatt tacggtaacc
    14041 aggtagaaac tcgtcgccca atcgcaacta ttatataagt atttcggttt taagttatgt
    14101 tgtttattat agctttctaa aggagcaggg tcaagctaat tttttactta ttgaattggt
    14161 aaacataagc gtatcttttt tctagtaaat ctagcaaata cgttggattt aagccttctc
    14221 cagttgtatc tgttagaatc tcgagaggtt tcttcgtttt accaaattta tgcacatgtt
    14281 cagtcaacca cgtttttaat tccgaataat catcgcttgc gataatcgca tcgatattcg
    14341 gaatttcttt ttgcatttgg ttaaagaact gcgccgcgta cattaaacct aatgcataag
    14401 acgggaagta accaaaatcg ccaccagccc agtgaatatc ttgcagaacg ccatttgtat
    14461 cattatctgg acgaatgccg agatattctt cgtatttgtc gccccatgct ttcggtaaat
    14521 cttttacttc taattcaccg ttaataagtg ctttttcaag ctcatagcga atcataatat
    14581 gaagcggata agttaatgta tcagcttcaa ttcgaatcaa cgaactttca gagatgttca
    14641 ctgcgcggta aaaatcttcc aaagtcacat gatcaaaagc cggttttgta atcgcttgga
    14701 agtcagcata attacttttc caaaatgcta aactagaacc gataataatt tcataaaata
    14761 atgattgtga ttcatgaatg cccattgatg cgccgtttgc aagtggagta cctacaagtg
    14821 ctgcatcaaa attttgttcg taaatcgcat gaccaccttc atgaatcgta ccaaaaacag
    14881 ccattttaaa atcattttca ttgtaacggg tcgtaatacg aacatcgcca gtatttaaac
    14941 cagtcgcaaa aggatgcacg gtttcatcta aacgacctgc ttcaaagtca aagcccattt
    15001 tattcagaat gcgaatgcta aattcttttt gttttgcttc ggatattttg gtatttaaaa
    15061 tcgtcgcatc tggcttcacg ccttcatttg cgattttttc gcgaatcgcc ataattccgt
    15121 cgcgtacttt ttcaaatacg gaatcaagca cagatacggt tacacctggc tcatattgat
    15181 caagtaatgt gtcatattta ttttcttcat aaccccaata ttcaacaaat ttacgcttca
    15241 tttcaaggat ttttgttagg aacggttcaa aagctgcaaa atcattttgt tcgcgagctg
    15301 ttgtccaagc cgtttctgct tgcgctacta gtttagtata ttccgcgtat tctttacttg
    15361 ggattttttt gtttaaatca tatttttttt gagattcttc taaagtttta agagtgattt
    15421 cagatagatt ttctttatca aggttaagtc cagcaataaa agcagccatt tcttcagatg
    15481 tttgcatatt gaaaatctct tcagatagaa cgccaataac atcagagcga ccttccattc
    15541 cttttgacgg ggcgcctgta cgaagatccc aataaactaa tgccagtgct tcttccagtg
    15601 cttccatctt tttaatatac gctaaaaatt cctcttctaa tgtttctacc aaacttaact
    15661 cctccattca atcaatcttc ttttttagga cgtggttttc ttggacccca gtattgatat
    15721 aaatctgtgc gcaagtaacc attgtataat ttccgttttt tcgtcgcttt tttaccataa
    15781 acttcttcaa aaagttcata agaggtaagg acatatactg accatgtcgg catgcgttta
    15841 taaacaatac ccatttcgcg gtaaagttgg cgcactgctt cctcgtcttc taaacgttcc
    15901 ccgtatggtg gattcgcaac aacgaccccg tactcatctt ctgtttgaaa gtcagctact
    15961 tgtagttgtc taaaggtaat taagtcacca aggccagctt cgaccgcatt ttgctttgcg
    16021 atttcaatta aacgagcatc aatatcgcca ccaataatat ttagcggttg atcatagtta
    16081 gctaaatctt ccgcttcttg tctcgcatcc gcccaaactt gcttcggcat ccaatcccat
    16141 gtttctgaca cgaactcgcg gttaaaacca ggcgcaatat tttgcccaat tagtgccgcc
    16201 tcaattggaa ttgttccaga accacaaacg ggatcataaa atggtctatc tggatgccaa
    16261 ctcgtaagta gtacaagtgc cgccgccatt gtttctttga ttggcgcact accttgtgct
    16321 aaacggtaac cacgtttatg taatcccgca ccactagtat caattgttag cgtcacttca
    16381 tcttttaaaa tagaaacttc taacttaaat aacgcgcctg tttccatcaa acgaccagaa
    16441 cgacgatact tttcactgac acggttaacg atggcttttt ttacaatcgc ttggcaatca
    16501 ggcacactat aaagcgttga cttaactgat ttaccagcca ctggaaactg tgcatcaagc
    16561 ggtaaataat cttcccaagg taaagctttc gtcttttcaa atagttcatc aaatgtcgtt
    16621 gctttaaaaa caccaaccac aattttcaca cggtcggcta cacgaagcca tagattggct
    16681 ctagcaattg cagataaatc tccttcaaaa tatactttac cgttttctac ttttgggtca
    16741 tagcctaaac gcgctacttc tttcccaaca attgcctcta aacccgaagc agccgttgcc
    16801 accaactgaa atgatttcat tgtttcccat cctttaatta aatttctaat gaaaaaagct
    16861 gttttaagag gaggaggttt gttttaaata ggcattcaac caggtcgaac acccacctta
    16921 aaacttgcgc tccggccttc taaaacagcc ttcaatgtta aattaaatcc tgtaaataac
    16981 gctctgtaag ccatgttctg ttctttacta cgtacagggt aatagtaaag agataaccat
    17041 ctatctgcgc aaaaatacat ttgcgcctcg tcccttgttc ttgattcctc gggaaaagtg
    17101 cccctaccat aagtttgagt ttctcgctcg tggggtttac ctcgttccac ttccgagcat
    17161 ttctgccgga acttcgtcac tgtggcacct tcaaggttat aagaccatat ccgaagactt
    17221 aggtcattca cctgccgtca aaccggaaat ccggaatgcc ctggcttatt gtttgaccag
    17281 gcacgatcac tacgggcatc acagcaccgt gcgagcatgg actttcctct gcttccataa
    17341 gaaaacagcg attatccgaa cgttattcat ttattcttaa cttacttata ctagcatacc
    17401 tattcgttat cgtccagctt atttccaaaa acatgttttt ctaaattaga aagacgcttt
    17461 agaatatcaa agttggtcgt tccagcaggt tgtgccgctg cttggaaagt tggagctggt
    17521 tgtgttgaag ttctaagtgg agcattatca agctcttgta caagtcgaat attttccgct
    17581 tgaagtgctt cgatttcttg cgtaaatgta ctgtaatctt taataaccat gtctaaaaac
    17641 tcgtcaacat cttcaggact ataaccacga agcccagttt taaattcttt ttccaaaatt
    17701 tctttacctg ttaagtgata ctcaaattgt tccgaagtca tataactcca cctctatctc
    17761 tattcttacg tatttttgtt ctaatcatat acttaccctt attttttcaa atctcacacc
    17821 atttgtcaat ctattcgagt gttttttatg aaaataactg tttacttcca t
//
LOCUS       DASDYK010000048        17342 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.048, whole genome shotgun sequence.
ACCESSION   DASDYK010000048 DASDYK010000000
VERSION     DASDYK010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 17342)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17342)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17342
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.048"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            193..543
                     /locus_tag="U0308_001622"
     CDS             193..543
                     /locus_tag="U0308_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316588.1"
                     /translation="MKKKKWLQLIMAVIVLCAIIFGIKWLLYRDNLVEMMQVDDTLYI
                     VSYEPAKQEDALEKIGEIEHRIRHYRIPNKNFTSNYLSEGTELYKAKNGDEFPRTILF
                     KEDGEYFIASEAMK"
     gene            complement(745..1212)
                     /locus_tag="U0308_001623"
     CDS             complement(745..1212)
                     /locus_tag="U0308_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YobD family protein"
                     /protein_id="HEM2316589.1"
                     /translation="MVWDATNIFLFAANILTVLYILYNDAVIPLWKGKTVLSVKLRSR
                     GRWDGYIFVGIIVLLFVSNTFFREGPFSTSVLLGIMGVLFIYICFFRSSKAVFKESGL
                     FYALLFFPYAKIERMNLSEDGVLVIETNRQRLMLFARSEKDLEKMLAVFTTYS"
     gene            complement(1394..2272)
                     /locus_tag="U0308_001624"
     CDS             complement(1394..2272)
                     /locus_tag="U0308_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HEM2316590.1"
                     /translation="MSEQITVNEKKITKSDLMGVFIRSNLFQGSWNFERMQSLGFCFS
                     VIPVIKRLYPEKGPEREQAIKRHLEFFNTHPYMAAPILGVTTAMEEQKANGADIDDGA
                     INGIKVGLMGPLAGVGDPIFWGTVRPVLAALGAGFATDGSIIGPILFFVLFNAIRLGF
                     RYWGVFYGYTKGTDVVSDMSGGLLQKLTEGASILGLFVMGALVNKWTTIYVPLVAYTT
                     EDSKTGKDVPTTVQSILDQLMPGLLALLLTFACMWILKKKVNALWLILGLFVVGILGY
                     WSGILGLPPAGYSPLG"
     gene            complement(2290..3105)
                     /locus_tag="U0308_001625"
     CDS             complement(2290..3105)
                     /locus_tag="U0308_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HEM2316591.1"
                     /translation="MSAIQLILVFLVSCISGMGSILDEWQTHRPLIACTLIGLVLGDI
                     TTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVITGGQDISVGISLAIPLAA
                     LGQVLTILVRTITVAFQHMADKAGKEGNLRSLDWIHVTALLLQAMRIAIPAVIVAVTV
                     GTQAVENLLNAIPDVIVNGLNVAGGFIVVVGYAMVINMMSAKYLMPFFFLGFVVAAFT
                     AFNLVALGVLGLVAAIIYIQLNPKYQLKEAIQQYGGGGGGRSADDDLDDDLDD"
     gene            complement(3280..3768)
                     /gene="manX"
                     /locus_tag="U0308_001626"
     CDS             complement(3280..3768)
                     /gene="manX"
                     /locus_tag="U0308_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003229832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HEM2316592.1"
                     /translation="MMEIRLARIDDRLIHGQVATVWTKETQVERIIVISDDVAKDEVR
                     KTLLTQVAPPGVKASVVDVQKGIRVYNNPKYATTPVMLLFTNPTDVLTLVEAGVNITT
                     VNIGGMAFREGKHMITNAVSVDETDEAAFRKLDEKGIELEIRKVASDNKVKLIPLLDK
                     DK"
     gene            complement(3765..4199)
                     /locus_tag="U0308_001627"
     CDS             complement(3765..4199)
                     /locus_tag="U0308_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HEM2316593.1"
                     /translation="MPVGIIIGTHGEAARELLKSTEMIIGKQDNVEFITFVPGENTDT
                     LITKYKEKLDKLDTSEGVIFMVDLFGGSPYNASSQIALPEDNMDVVTGVNIPMLLETL
                     SMRAASNQKDLVETALTAGSGGVKSLKQSLPKIETEVGEDDL"
     gene            complement(4487..7303)
                     /locus_tag="U0308_001628"
     CDS             complement(4487..7303)
                     /locus_tag="U0308_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HEM2316594.1"
                     /translation="MKRIDRIYEFILENPSTKTIREQLEKNEGFTASTISETLSILRN
                     NVSMELNELHRQGKIIKIVGRPVLYFPKKAVEDEIGRTLSDNELEFDSCEPLLKMLKP
                     SIVERSPFDDLIGVNDSLKTPVEQAKAAVLYPPNGLHTMILGQTGVGKTLFANLMYRF
                     SQHAKRLPADAPFIIFNCADYYNNPQLLMSHIFGHVKGAFTGADNDKGGLVEKAEGGI
                     LFLDEIHRLPPEGQEMIFYLMDSGTYNKLGETDRTRKSNVLIIGATTENPESSLLKTF
                     MRRIPIIITLPSLEERTAFERVELLKYLLSSEAHRVNKPIRIEDEAAKALIGNTTYGN
                     IGQLKSNIQLVCAQGFLNSFDKDEEILIDFKTLPINIKDGFFHFSNRRKELQAIAEYL
                     EPYTTIFPELNNTLITSDEYEPNFNLYKIIEDKASILMDQGVEDDDIKKFIKMDIDIH
                     LNSFYNKFKNTIHNRENILKIVNEEILNFAEGVELRIEHQLGKKLNERFLLAFSLHLT
                     SFIKRIESNKPLKYTNIENVVNDQPEAYELSREIKDDIEATFHIRVPNMEVMYLTLLI
                     SSLLKEQENARVAVLVATHGNNTASSMVSVAKKLLGEGLVEGIDMPLDQSPKIVLDKL
                     TERAKEMDMGRGLLLLVDMGSLTSFAPVISERTGIPVRSIDMVSTATVIEAVRKSNIL
                     DMELDSIYDSLKDFRGYGGYNSDDDTLDSNQKPHAIITICATGEGTAEKLQLFIENIL
                     DTITTDAIKVIPIGLHEMDTKLEQLQEENDILMAVGIQDPKIQIPFIPLERLFGIDGE
                     EQLVSLVKQRNIIVKKGETGRIAKEIIEESLNEFLTYLNPKKTIEILSSFASVLEKKL
                     GYKLDNTFKINLLIHVGCALERMVLNDGLIYREPKDMLETNIFKALEQTNKEVIYKMN
                     LKLTNDELCYLYDILNEIQPEVLS"
     gene            7496..8131
                     /locus_tag="U0308_001629"
     CDS             7496..8131
                     /locus_tag="U0308_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HEM2316595.1"
                     /translation="MSKVLFIKASPLPNEVSRSSQVAETFMAEYKAKNPSDTVEELVL
                     YNTEVPLLDLELMTAGRELQAGKAFTDLAPDVQKKLNAYNALTEQFLAADKYVFVFPL
                     WNLGIPPLLKAYIDTFVIAGKSFRYTEHGPEALLKDKKAILIHGSGGIYSAGPTSSFT
                     HGEPYLRTILQFIGINVVPSIFVEGIDHNPSKEAEIVAAAKAVAQESAAEF"
     gene            8325..9701
                     /locus_tag="U0308_001630"
     CDS             8325..9701
                     /locus_tag="U0308_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEM2316596.1"
                     /translation="MEEQKEELQRGLKNRHIQLIAIGGAIGTGLFLGAGKSIHLAGPS
                     IMLVYLIIGAILFFVMRALGELLIHNPTTGSFTEFAEQFIGPWAGFITGWTYWFCWIV
                     TGIAEITAVGMYVKFWVPDLPQWIPALACVLILLLFNLATVKAFGEIEFWFAIIKVVV
                     IIALIVIGFVLVFIGYKHGTSTASFSNLVDYGGFFPNGIAGFLLAFQMATFSFVGIEL
                     VGVTAGEADDPERTLPKAINNIPIRILIFYIGALLVLMSIYPWSNIDPNTSPFVSVFT
                     MIGIPAAAGIINFVVLTAAMSSCNSGIFSTSRMLYTLSAEGKAPKKMHHLSSNGVPAT
                     ALITSTACLLIGVFLNYFLPEQVFILVTSIATICFIWVWGVILVAHLRFRHKHPEIAE
                     KSKFKMPLSPLMNWVSLIFFGGLLVILGFAADTRIALFVTPVWFLILGIAYQVLKASN
                     RKTKIRHN"
     gene            9966..14396
                     /locus_tag="U0308_001631"
     CDS             9966..14396
                     /locus_tag="U0308_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase"
                     /protein_id="HEM2316597.1"
                     /translation="MIHAGLDVGSTTAKAVALNDQGDILFQTYRRHYSDIKKVTLEIM
                     QDMQKKCGMTEMTFKITGSSGLAISKFLNVPFVQEVIACTEAVEQVIPETDVVIELGG
                     EDAKIIYFSGGIEQRMNNACAGGTGAFIDQIATLLQTDPTGLNELAQNANTIYPIASR
                     CGVFAKTDVQPLLNEGARKEDIAASIFQSVVTQTISGLACGRPIRGKVAFLGGPLTFL
                     DQLRYRFTETLKMKDSDIIAPQNAEYFIALGTAFTGLNDVPLKVDDMIYRLSNMDMTT
                     MATDTVILPALFEKQEDLEAFRARHNQMKAKRAKLEDYEGDAYLGIDAGSTTTKLILM
                     SQTNEILYSFYSSNNGNPLQSVIDATSDLYEILPEKVRVAQSGITGYGESLIKAALKI
                     DVGEIETVAHYRAAREFLPDVDFILDIGGQDMKCMKIKKGALDSLMLNEACSAGCGSF
                     LETFAQTLNLSIEEFAARALEAKAPVDLGSRCTVFMNSKVKQVQKEGVSMEDLSAGLA
                     YSVVKNALQKVIKLRSPKDIGEKVIVQGGTFYNESVLRAFELLTGREVVRPDIAGMMG
                     AYGAALIAREHYETGEVTEMLVLEKLREFSAETSQSRCNLCSNTCQLTVTRFGDDRMF
                     VSGNRCERGERVETKRNLLPNLYAYKLKRTFDYKSLKKSESTRGTIGIPRALNVFENY
                     PLWHTILTNLGFRVVLSSKSSKNLYDKGIETIASEAVCFPAKLTHGHIMDLIKKKADR
                     IFYPSVVYEKPEFGEATNNFNCPVVAGYPEVIRVNVDALEEKNIPMISPFLTLDNEKA
                     LIEQMSLAFPEVPAADMEKAVQAGLEEAELCRKDIQAEGEAALTYIKKNKIKGIVLAG
                     HPYHIDPEVNHGIPELITMNGMAVLTEDSISHLGEMDHKLRVENQWKYHARLYRAASF
                     TAKSEDLEFVQLTSFGCGLDAITTDMCQEIIEGHNKVYTLLKIDEINNLGAARIRVRS
                     LKAAMEEREKNNVKPGIMPKPKERPLFTKEMKKTYTILAPQLAPTHFEMLEAACKVGG
                     YNLEVLPAVTPRAVDEGLRYVNNDACYPAILTIGQMMDALKHGDYDVNNLAVLMTQTG
                     GGCRATNYISMLKKALGEAGLDHIPVISLNANGLEKQPGFKMTPKVLVRFLAGISLGD
                     ALDRMLYRTRPYEVEPGSANKMFRHYLDAGRALMENYSFGAYKKLANEMVRAFDNLPI
                     TNEVKPRVGVVGEILVKFHPGANNNIVDVIEDEGGEAVVPDLTDFILYCCYDDHFAAN
                     TFGRSKVKSFAKQSVAIPLINQFRKPVTDALKKSERFEAPASIESIAEKASQLLSLGN
                     KMGEGWFLTGEMFELLDSNVPNIACLQPFACLPNHITGRGMIKGLKKMYPEANIMSID
                     YDAGSSSVNQLNRIKLMLSIARKQLETTEVITEKETNTRFNPREKILGKAKQVRESAP
                     VEMIGNKVKQARDADPVGAIAQKVKHVASSSSEHVQTDND"
     gene            14574..16754
                     /locus_tag="U0308_001632"
     CDS             14574..16754
                     /locus_tag="U0308_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2316598.1"
                     /translation="MKKFVLIFICFLTLTTIVPWNTLETKAASTSWLEQELDGNEAFI
                     TETERVLSKNREDITLADLETIQELDIYGDASSIPDKISDYKNLNTLLALNGTISEIP
                     TSITKLTKLTRINVDNNNFQEFPMILLQMPSLSSIEINRNKIKEIPSEITTLSPHLGS
                     LDVRYNELITLPDNIFTTEWESKLSLLTTGNQLVSDIPADWLDNFNQADNMLEFYNNP
                     PNDYHQKQDQLTYSGARIEVPLNTDLKTLTPDKTKLGLKSGRTLFEQHEFMYYDDGTS
                     NNILTNGVATATGNGYITIKSTLSTNSNPFAKVRVPITVTPPVKGGDVTVQYKDTTGV
                     VLADSITLSGNVGENYTTTAKTIDGYSLTTTPTNANGTFSTNPQTVTYTYKKDPIAQP
                     VTVNYIDTDGKTIAPTETLSGNVGENYTTTAKTIDGYSLTTTPANANGTFSTNPQTVT
                     YTYTKDPIAQPVTVNYIDTDGKTIAPSETLTGNISENYTTTAKTIDGYSLTTTPANAK
                     GTFSTEPQIINYIYAKNAETAQPITVNYRNSTGQKIAKSEVLTGNIGESYSTQPKTIA
                     GYTLTTIPPNAKGTFTTNAQTVTYMYTPIAISALPVTVNYLDENGKEIADSVVLNGRV
                     GEAYNTLAKEIDGYTLIKTPTNANGVFSAEAQSIDYIYRKNKPVVIVNPPIKNPIIKI
                     DSSTNVIKEETSVLPKTGDSNPYNDFLAGILLLSSAMFLWKNHK"
     gene            complement(16871..>17342)
                     /locus_tag="U0308_001633"
     CDS             complement(16871..>17342)
                     /locus_tag="U0308_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HEM2316599.1"
                     /translation="PNKLTGCFNLNLLNTNYPIQIVSTGLKDILIPIKSEADLYALEP
                     NFEEVKKVSKHYEVVGMHLYTFNADQIICRNFAPLYDINEEAATGTSNGALACYLYKN
                     HYLRKENYVFEQGYSLHSPSEIFVNLVISNKDEIEKVYVGGKGYYCEMQDLSME"
BASE COUNT         5621 a         3261 c         3331 g         5129 t
ORIGIN      
        1 catactgtgt aagaataaat ctaaataaag ccagttttaa ggtattcatg acaagaatca
       61 gacatttcat tacatttttg gttatacatt ggctttttat gatacactca tcgtgcaaca
      121 aaatatacca acattgtgac ggaatggttt attaaaagcg gtaataaata aaatgaaaag
      181 tgagataata gaatgaagaa gaaaaaatgg ttgcaattaa taatggcagt aatagttctt
      241 tgtgcaataa tattcgggat aaaatggtta ttatatagag acaatcttgt agaaatgatg
      301 caagttgacg acactttata tatagtgtcg tatgaaccag caaagcaaga agatgcttta
      361 gagaaaattg gtgagataga gcatagaatt cgccattacc ggataccgaa taaaaatttc
      421 acatctaatt atttaagcga agggacagaa ctttataaag cgaaaaatgg agatgagttt
      481 ccaaggacta ttttgtttaa agaagacggc gaatatttta ttgcatcaga ggctatgaag
      541 tagcctaata aaaagcgtta gtttattttt tctcttaata gagaaagttt atcgtctaca
      601 actaaatgga acatatgtaa aagtatactg attggcatac ttttcatttt taagaaaaat
      661 cattgattct aaatttaagt agagtgaaca taaaaaacgc catgcttcat ttccctaaaa
      721 acagggaagt aagcgtggcg ttttttagct atatgtagta aatacagcga gcattttttc
      781 taaatctttc tcggatcttg caaagagcat caaacgctgg cgattggttt caatcacgag
      841 cacaccatcc tctgacaaat tcatccgttc gatttttgca taagggaaga ataacagggc
      901 gtaaaaaagt ccggattctt tgaaaacagc tttcgaactg cgaaagaagc agatatagat
      961 gaataacaca cccataatcc caagcagaac agaagtggaa aatggtcctt cacgaaagaa
     1021 cgtattggaa acgaataaca gaacgataat tccaacaaaa atataaccgt cccagcgtcc
     1081 acgagaacgc aatttgacac ttaaaaccgt cttccctttc caaagtggaa ttactgcatc
     1141 attatacaaa atatacagta ccgtcaagat gtttgccgca aacaaaaaga tattagtagc
     1201 atcccaaacc attttagcta tcactcacaa tctatcattg atatagttta gtaatattgt
     1261 aacataatta tgcggggaag agggggaact gggtttgagg ataatcattt agagaggctc
     1321 tttcggcacg ataagacaca aaaaagaacc ggaattttaa tcccggttct tttcgaatta
     1381 ttataaccac ccattaccca agtggtgaat aaccagctgg tggaagtcct aagataccag
     1441 accagtaacc tagaatacca acaacgaata gtcctaaaat caaccataaa gcattgactt
     1501 tcttcttgag tatccacata caagcgaatg tgagtagaag ggcaagaaga cctggcatta
     1561 attggtccaa gatactttga acagtagttg gaacgtcttt accagtttta gagtcttctg
     1621 ttgtataagc tactagtgga acatagattg tggtccattt attaacaagg gcacccatga
     1681 cgaatagtcc aagaatggaa gctccttctg ttagtttttg aagcaaaccg ccagacatat
     1741 cagatacaac atctgtacct tttgtatatc cgtagaacac gccccaataa cggaaaccta
     1801 aacgaattgc attaaatagt acgaagaata aaattggtcc gatgatacta ccgtcagttg
     1861 caaaccctgc acctaaagcg gcaagtactg gacgaactgt tccccagaaa attggatccc
     1921 caacgccggc aagtggtccc attagaccta ctttaatacc attgattgca ccgtcgtcga
     1981 tatcagcacc attggctttt tgttcttcca tcgcggttgt tacacctaag ataggagcgg
     2041 ccatatatgg atgcgtatta aagaactcaa ggtgacgttt gatagcttgt tctctttcag
     2101 gtcctttttc aggataaaga cgtttaatta ctggaattac tgagaaacag aatcctagag
     2161 attgcatacg ttcaaagttc cacgaccctt ggaagaggtt ggaacgtatg aacacgccca
     2221 ttaagtcact tttcgttatt ttcttttcat taactgtaat ttgttcactc atatttttct
     2281 cccccttcct tagtcgtcaa ggtcgtcgtc gagatcatca tccgctgatc gtccgccgcc
     2341 gcccccgccg tattgttgga tagcttcttt caattgatat ttagggttta gttggatata
     2401 aatgattgct gcaactagtc ctaaaacacc tagtgctact aagttaaacg cagtaaatgc
     2461 tgcgacaaca aaacctaaga agaagaaagg cattaaatat ttagcggaca tcatgttaat
     2521 aaccatggcg taaccaacaa caacgataaa tccaccagct acgtttagac cattaacaat
     2581 aacgtccgga atggcattga gtaaattttc gactgcttgt gtaccaactg ttaccgcaac
     2641 gataacggct ggaattgcaa tacgcatagc ttgaagtagt agtgctgtaa catgtatcca
     2701 gtcgagactt cgcagattac cttccttacc agctttatca gccatgtgtt ggaatgcaac
     2761 tgtaattgta cgaactagaa ttgtaagtac ttgaccaaga gcagctagag gaatcgcaag
     2821 cgaaatacct acgctgatat cttgtccccc agtaataact aagatagtag aaataatgga
     2881 tgcaagggca gcatctggag caaccgcagc tccgatattc atccatccaa gcgcgatcat
     2941 ttcaagtgtt cccccaataa taataccagt tgtaatatcc ccaagaacaa gaccaattaa
     3001 cgtacaggca attaatggac ggtgcgtttg ccactcatcc aaaatactac ccataccact
     3061 aatacaggat acgaggaata ctaggattaa ttgtattgct gacatatatt tccctcccaa
     3121 tttttcttta gaatgataaa aaaagataat ttcattatga tgactgaata aattaagcat
     3181 ctattacata agcttttatt catgaatcac ccctttaaag gtcttccttt aaacgtttgc
     3241 attttcgggg ctctaaaaaa caagcgagcc gcggatgaat tatttatctt tatctagtaa
     3301 tgggataagt ttgactttat tgtcagaagc gactttacga atttcaagtt caattccttt
     3361 ttcatctaat ttgcggaatg ctgcttcatc cgtttcgtcc acagacacag catttgtaat
     3421 catgtgttta ccttcgcgga atgccatacc accaatgttt acagttgtaa tgtttacacc
     3481 tgcttctacg agtgttagca catcggtagg gttagtgaat aatagcatga ctggagttgt
     3541 agcatattta gggttgttgt atacgcggat acctttttgt acatccacga cgcttgcttt
     3601 aactcctgga ggtgctactt gtgtaagaag tgttttacgc acttcatctt ttgctacatc
     3661 gtcactaata acgatgatac gttctacctg cgtttctttt gtccaaacgg ttgctacttg
     3721 accatgaatt aagcgatcat caatacgtgc taagcgaatt tccattataa atcgtcctcc
     3781 ccgacttcgg tttctatttt tggtaatgat tgtttgagtg acttaacgcc acctgatcct
     3841 gctgtaagag ctgtttcaac tagatctttt tgattacttg cagcccgcat tgagagcgtt
     3901 tcaagtaaca tgggaatatt gacccccgtg acaacatcca tattgtcttc tggaagggcg
     3961 atttggctag atgcgttata aggactgccg ccaaataaat caaccataaa aataacgcct
     4021 tcagaagtat ccaatttgtc tagtttttct ttgtatttgg taataagcgt atcagtgttt
     4081 tctccaggaa caaaagtaat aaattctaca ttgtcctgtt tgccgataat catttcagtt
     4141 gatttcaaca attcacgcgc agcttcacca tgtgtgccaa tgataattcc aactggcata
     4201 ggtatctcct ccttaagcgt ggatataatc atccattaat actaacgcaa aaactgtgcc
     4261 aacatttctg tattaaacaa cctcctttgc taatagaagc ggttcaaggc ttttgtaagc
     4321 gtgtactaac agaagcggcg cgccttaata cgctagatac gtagcttaat acactaagta
     4381 ctaatcttag acatacatac atcattaccc taaaagatta gccagaaaac gcaattgctg
     4441 aaaataaaac aagccaactt atgaaaaaat gttggcttgt ttgtaattat gaaagtactt
     4501 ctggttggat ttcgttcaaa atatcataca aataacatag ttcgtcattc gtcagtttta
     4561 agttcatttt gtagataact tctttatttg tttgttccag cgctttaaag atatttgttt
     4621 caagcatatc ttttggttca cggtaaatta aaccatcatt tagaaccata cgctctaagg
     4681 cgcaaccgac atggatgagt agattgattt taaaggtatt atcaagtttg tatcctagct
     4741 ttttctccag tacactagca aacgagctta gaatttcaat cgttttcttc ggattgaggt
     4801 aggttagaaa ttcgttaaga ctttcttcga taatttcttt tgcgatgcga ccagtttcgc
     4861 ctttttttac gataatatta cgttgcttca cgaggctaac aagttgctcc tcgccatcaa
     4921 ttccgaaaag tcgttcgagc gggatgaagg ggatttggat tttcggatct tgaataccga
     4981 ctgccatcaa aatatcattt tcttcttgta actgctccaa tttcgtatcc atttcatgca
     5041 aaccaatcgg aatcacttta atggcatctg tcgtaatggt atctaaaata ttttcgataa
     5101 acagttgtaa tttttctgca gtaccttcgc cagtcgcgca aatggtaatg atggcgtgtg
     5161 gtttttgatt ggaatcaagt gtatcgtcat cagaattata gccaccataa cctcggaaat
     5221 ctttcaggga atcgtaaatg ctatcgagtt ccatgtcgag aatattggat tttcgaactg
     5281 cttcaataac agttgcggtg gagaccatat caatcgagcg aactggaatg ccagtacgtt
     5341 ccgaaatgac cggagcaaaa cttgtaaggg agcccatatc gaccagaaga agtagaccgc
     5401 gccccatatc catttctttc gcgcgctcgg tcaatttatc aagcacgatt ttcggacttt
     5461 gatcaagagg catatcgatt ccttccacga gtccttcacc gagtagtttt ttcgcaacac
     5521 taaccatgct actcgctgta ttattcccat gcgttgcgac gagtacggcg acacgagcat
     5581 tttcttgttc ttttaaaagg gaactaatga gtagtgttaa atacatgact tccatattag
     5641 gaacccggat gtggaaagta gcctcaatat catccttaat ttcccgtgat aattcatagg
     5701 cttccggttg atcattgacc acattttcga tattcgtata ttttaatggt ttgttacttt
     5761 caattcgttt aataaaagag gtaaggtgaa ggctaaatgc aagcaagaag cgctcgttta
     5821 actttttacc aagctgatgt tcaattcgga gttcaacacc ttccgcaaaa ttcaggatct
     5881 cttcattgac gatttttaag atattttcgc gattgtggat cgtattttta aacttattgt
     5941 aaaagctgtt aaggtgaata tcgatatcca tcttgataaa tttcttaata tcatcatctt
     6001 ccacaccttg atccattaaa atcgatgctt tgtcttcaat gattttgtaa aggttgaaat
     6061 tcggctcata ttcgtccgat gtaatcaacg tattatttag ttcagggaaa atcgtcgtat
     6121 atggctccaa gtattccgca attgcttgaa gttccttgcg acggttactg aagtggaaga
     6181 agccgtcttt tatattaatc ggcaacgttt taaaatcaat caaaatctct tcatctttgt
     6241 cgaaactatt aaggaaacct tgtgcgcaaa cgagttgaat gttggatttt aattgcccga
     6301 tatttccata agttgtatta ccaatcagcg ctttggcagc ttcatcttca atacgaatcg
     6361 gtttattaac tcggtgcgcc tcactagaaa gtaagtattt taaaagttcc acacgttcaa
     6421 acgccgtacg ttcctccaaa cttggcagcg taataataat cggaatacga cgcataaacg
     6481 ttttcaaaag cgaagattcc ggattttcgg tagtagcacc gataattaaa acgttcgatt
     6541 ttcgggttcg atccgtttcg ccaagtttat tatacgtacc agagtccatt aagtaaaaaa
     6601 tcatttcctg accttcagga gggagacggt gaatttcgtc gagaaacaaa attccacctt
     6661 ccgctttttc tacaagtcca cctttgtcat tgtcagcacc ggtgaaagca cctttaacat
     6721 gcccaaaaat gtgcgacatc aaaagttgcg gattattata gtaatcggcg caattgaaaa
     6781 taataaacgg cgcatcagca ggtagacgtt tggcatgttg cgaaaaacga tacatcaaat
     6841 tagcaaaaag tgtcttacca acaccagttt gtccgagaat cattgtatgt aaaccatttg
     6901 gtggatagag tacagcggct ttggcctgct ccacaggggt tttaagactg tcattaacac
     6961 caattaaatc atcaaaaggg cttctttcaa caatacttgg tttgagcatt tttaaaaggg
     7021 gctcacagct gtcaaactcc aattcattat cagaaagtgt acgcccaatt tcatcttcta
     7081 ccgctttttt aggaaaataa agcactggtc ggccaacgat tttaatgatt tttccttgtc
     7141 tgtgaagttc attcaattcc atactgacat tatttcttaa aatagataat gtttctgaaa
     7201 tagtactagc tgtaaaacct tcattcttct ctaattgttc gcgaatggtt ttcgtggaag
     7261 gattttctaa aataaattca taaatacggt caatacgctt catcataaaa cctccattta
     7321 gtgtatcgat gcacgattag tgtattataa acgattaata cactctggaa ttctgtattt
     7381 atcttagcat gactagtgaa aatgtcaatg tttatttacc aaaaatcaaa ttgactagct
     7441 acgcggatag tactattata tagaaggaac aaataaaatc gatgaggtgt tcataatgtc
     7501 aaaagtacta tttattaaag cgtcaccact tccaaatgaa gtatcaagaa gttcgcaagt
     7561 tgccgaaacg tttatggccg aatataaagc caaaaatcct tctgatacag tagaagaatt
     7621 agttttatat aatacagaag taccactatt agatttagaa ttaatgacag ctggtagaga
     7681 attacaagct ggcaaagctt tcactgattt agcgccagat gtacaaaaaa aattaaatgc
     7741 ttataatgcg cttacggaac aattcttagc agcagacaaa tatgtttttg tgttcccgct
     7801 ttggaacctt ggaatcccgc cattattaaa agcttatatt gatacttttg ttattgctgg
     7861 aaaatctttc cgttatactg agcacggtcc agaagcactt ttaaaagata aaaaagcaat
     7921 cttaatccat ggtagtggcg gtatttattc tgctgggcca acaagttcat ttactcacgg
     7981 agaaccttat ttacgtacta ttttacaatt tatcggtatt aatgttgtac catcaatctt
     8041 tgtagaagga attgatcaca atccgagcaa agaagcggaa atcgttgcag ctgctaaagc
     8101 ggtagcgcag gaaagtgctg cagaattcta aaaagtttgt gaaaaaatta tttcttgcta
     8161 atgatattaa gacagtatta tcaactgtct agaccaataa aaacacataa aaagattgct
     8221 aatcccttta taaattggta aagtagagaa gtagattgat cgataaagtg ctgaattaac
     8281 tcggcacttt attcttttta attactcgaa agggatgaat ttggatggaa gagcaaaaag
     8341 aagaattgca aagagggctg aaaaatagac acattcagtt aatcgcgatt ggcggagcaa
     8401 ttggtacagg gctttttcta ggagcaggga agtcaattca tttagccgga ccttctatca
     8461 tgttagttta cttaattatt ggggctattt tattctttgt tatgagagct ttgggtgaat
     8521 tattaataca taacccaaca acaggatctt ttacagaatt cgcagagcaa tttattggac
     8581 catgggctgg ctttattact ggttggacat attggttctg ctggattgtg acaggtattg
     8641 cagaaattac agcagttggc atgtacgtaa aattttgggt gccagactta ccgcaatgga
     8701 ttccagcact tgcatgtgtt ttgatacttc tattgtttaa cttagcaact gttaaagctt
     8761 ttggtgaaat cgaattttgg tttgcgatta ttaaagtggt tgttattatt gccttaattg
     8821 ttattggatt tgtactcgta tttattggtt acaaacatgg cacaagtaca gcttcatttt
     8881 ctaatttagt agattatggt ggctttttcc cgaatggaat tgccgggttc ttgctagcat
     8941 tccaaatggc gacattttct tttgttggaa ttgagcttgt tggggttact gcaggagaag
     9001 cggatgatcc agagcgtaca cttccaaaag ccattaataa tattccgatt cggattttaa
     9061 tcttttatat tggtgcgcta ctcgtattaa tgtcgattta tccgtggagc aatattgatc
     9121 caaacacaag cccattcgta agcgtcttta cgatgattgg gattcctgca gctgccggta
     9181 ttattaactt tgtggtgtta acggctgcta tgtcttcttg taatagtggg attttcagta
     9241 caagccggat gctttatact ctttctgcag aaggaaaagc accgaaaaaa atgcatcatt
     9301 tgagctctaa tggtgttcca gcaacagcgt taatcacatc tacagcatgt ttacttattg
     9361 gtgtgttttt aaattatttc ttaccagaac aagtatttat tttagtaaca agtatcgcga
     9421 cgatttgctt tatctgggtt tggggcgtta ttttagtggc gcatttacgt tttcgtcata
     9481 aacatccaga aatcgcagaa aaaagtaaat tcaaaatgcc attatctcct ttaatgaact
     9541 gggttagctt aattttcttc ggaggattac tagttatcct cggttttgca gcagatacaa
     9601 gaatcgcact tttcgtcaca ccagtatggt tcttgatttt aggtatcgct tatcaagttt
     9661 taaaagcttc caaccgaaag acaaaaattc gccataatta ataactgagc aagcattcgc
     9721 taaacggagc tattttaggg aatgcttgct ttttttcggc atgaaaatgc tccgcgaaat
     9781 tctttacaaa tgaaaaaaat cgtgtagaat gagaggtgtt tagagcattt tgtcgtattt
     9841 tcgcatatcg agtgagtact cactcatttt tagaaataac tatttatgtg aagcaacgta
     9901 caaatgacag ataatatgtg aagttacata catattaagt agtgcgtaat gaaagggatg
     9961 agaaaatgat tcatgcaggg ttagatgtgg gatcaacaac agcaaaggcc gtagcactta
    10021 atgaccaggg ggatatttta tttcaaacct acagaagaca ttattcagac attaaaaaag
    10081 ttacattaga aatcatgcag gatatgcaaa aaaaatgtgg catgacagaa atgacattca
    10141 aaattacggg atcatccgga ttagcgattt ctaaattctt gaatgtacct tttgtgcagg
    10201 aagtaattgc ttgtacggaa gcagtggagc aagtaattcc agagacagac gtagtaatcg
    10261 agctgggcgg ggaagatgcg aagattattt atttcagtgg tgggattgag caacgaatga
    10321 ataatgcctg cgcgggtgga actggtgctt ttattgacca aatcgcgaca ctgcttcaaa
    10381 cagatccaac aggtttaaac gaactggcac aaaatgcgaa tacgatttat ccgattgctt
    10441 ccagatgtgg cgtgttcgcc aaaacagatg tgcaaccact acttaatgaa ggggctagaa
    10501 aagaagatat tgccgcttca attttccaaa gtgtggtgac acaaacgatt agtgggcttg
    10561 cttgtggacg tccaatccgc ggaaaagtag cgtttcttgg aggaccactt actttccttg
    10621 atcaattgcg ctatcgtttt acagaaacat tgaagatgaa agatagtgat attattgcgc
    10681 ctcaaaacgc ggaatatttt attgcacttg gaacagcttt tactggatta aatgatgtac
    10741 ctttaaaagt agatgatatg atttatcgac tttccaatat ggatatgacc acgatggcga
    10801 cggatacggt cattttacca gcactttttg aaaagcaaga agacttagaa gcttttcgtg
    10861 cgcgtcataa tcaaatgaaa gccaaacgag caaaactgga agattatgaa ggggatgctt
    10921 atttaggcat tgatgcagga tcaactacga ccaaattaat cttaatgagc caaaccaatg
    10981 aaattcttta ctcgttttat tctagtaata atgggaatcc gctccaatca gttattgacg
    11041 caacgagtga tttatatgaa attttaccgg aaaaagttcg agttgcgcag tctggaatta
    11101 caggctacgg cgagtcgctt attaaagccg cactaaaaat tgatgttggc gaaattgaaa
    11161 cagtggcgca ttatcgtgct gctcgtgaat ttttaccgga tgttgatttt attttagaca
    11221 ttggcggaca agatatgaaa tgtatgaaaa ttaaaaaagg cgcactggat agcttgatgc
    11281 ttaatgaagc ttgctcggcc gggtgtggtt cgtttcttga aacgtttgcg caaacactta
    11341 atttatccat tgaagagttt gcggctcggg cgctggaagc aaaagctcct gtagacctag
    11401 gttcccgttg taccgttttc atgaattcca aagtgaaaca agtgcaaaaa gaaggcgtga
    11461 gcatggaaga tttatctgcg ggtcttgctt attcagtcgt aaaaaacgcg ttacaaaaag
    11521 taatcaaact ccgcagtccg aaagacattg gtgaaaaagt aatcgttcaa ggtggaactt
    11581 tttacaacga atcagtcttg cgtgcctttg aactgttaac tggacgtgaa gtagttcgac
    11641 cggatatagc cggaatgatg ggagcatacg gggccgcttt aattgcccga gaacattacg
    11701 aaactggcga agtaacggaa atgctcgtac tagaaaaatt acgtgaattt agcgcggaaa
    11761 cttcgcagtc gcgctgtaac ctttgtagta acacatgtca gcttacagtg acaagatttg
    11821 gcgatgaccg gatgtttgtt agtggaaatc gttgtgaacg cggggaacgt gtcgaaacga
    11881 agcgtaattt actgcccaat ttatatgcgt ataaactaaa acgtaccttt gattacaaat
    11941 cgctgaaaaa atcagaatca actagaggga ccattggtat tccacgcgca ttgaacgttt
    12001 ttgaaaatta tccactatgg catacgattt taacgaactt aggtttccga gtggttttat
    12061 catcgaaatc atccaaaaac ctatacgaca aaggtatcga aacgattgcc tccgaagcag
    12121 tttgtttccc agccaaatta acacacggtc atattatgga tttaatcaag aaaaaagcgg
    12181 atcgcatttt ctacccatct gtcgtttacg aaaaaccgga attcggtgaa gcaacgaata
    12241 actttaactg tcctgttgtg gctggttacc cagaagttat tcgtgtcaat gtggatgctt
    12301 tggaagagaa aaatattcca atgatcagtc cgtttttaac tttagataat gaaaaagcat
    12361 taatcgaaca aatgagtctc gctttcccgg aagtcccagc cgcggatatg gaaaaagcag
    12421 tccaagcagg gctagaggaa gcagaacttt gccgcaaaga cattcaagca gaaggagaag
    12481 cggcacttac ttacattaag aaaaataaaa tcaaagggat tgttcttgca gggcatccat
    12541 accatattga tccagaagta aaccacggaa ttccagaact cattacaatg aacggcatgg
    12601 cggttcttac cgaagattcg atttctcatc ttggagaaat ggaccataaa cttcgggttg
    12661 aaaatcagtg gaaatatcac gcaagactgt atcgtgcagc cagctttact gctaaaagtg
    12721 aagatttaga atttgtgcaa ttgacgtcat ttggttgtgg gcttgatgca attacgacgg
    12781 atatgtgcca agaaatcatt gaagggcata acaaagtata cacactacta aaaatcgatg
    12841 aaattaacaa ccttggtgcc gcacgtatcc gcgttcgttc cttaaaagca gccatggaag
    12901 aacgtgagaa aaataacgtg aaaccaggga ttatgccgaa accaaaagaa cgtccattat
    12961 ttacaaagga aatgaagaaa acgtatacta ttttagcgcc acagctagct ccgacccatt
    13021 ttgaaatgtt agaagcagct tgtaaagtgg gcggttataa cttggaagta ttaccagcag
    13081 ttacaccacg cgcagtggat gagggcttac gttacgtcaa taacgacgct tgttatccag
    13141 caattttaac gattggacaa atgatggatg cgctgaaaca cggcgattat gatgtaaata
    13201 atttagcggt attgatgacg caaacaggtg gtggatgtcg ggctaccaac tatatttcga
    13261 tgctgaaaaa agctctcgga gaagctggcc tagatcatat cccagttatt tcgcttaatg
    13321 ccaacggttt agaaaaacaa ccaggcttta aaatgacgcc aaaagttctt gttcgtttcc
    13381 tagccggaat tagcttagga gatgcgctcg accggatgct ttatcgtact agaccatatg
    13441 aagtggaacc agggagcgcg aataaaatgt tccgtcatta tctcgatgct ggtcgtgcgt
    13501 taatggaaaa ttactctttt ggagcatata aaaaattagc aaatgaaatg gttcgcgcct
    13561 ttgacaactt accaataaca aatgaagtga agcctagagt tggtgtcgtt ggagaaattc
    13621 tcgtgaaatt ccatccgggt gctaataaca atattgttga tgttattgaa gacgagggcg
    13681 gagaagcggt tgttcccgat ttaacagatt tcattttata ttgttgttat gacgatcact
    13741 ttgcagccaa tacatttggt cgttccaaag taaaatcatt cgcgaaacaa agcgttgcga
    13801 ttccacttat taatcaattc cgcaaaccag taactgatgc gctgaagaaa agtgaacgct
    13861 ttgaagcacc ggcgagtatc gaatctatcg ctgaaaaagc gagtcaatta ctatcactcg
    13921 gaaataaaat gggtgagggc tggttcttaa caggggaaat gtttgaatta ctcgatagta
    13981 acgtaccaaa tatcgcgtgt ttacaaccat ttgcttgctt gccaaaccat attactggtc
    14041 gaggcatgat taaagggctt aaaaaaatgt atccagaagc taacatcatg tccattgact
    14101 acgatgccgg ctcaagctct gtgaaccaac taaatcgaat caaattaatg ctctccatcg
    14161 caagaaaaca actagaaacg acagaagtaa tcaccgagaa agaaacaaac acacgattca
    14221 acccaagaga aaaaatcctt ggtaaagcaa aacaagtacg agaaagcgcc ccagtcgaaa
    14281 tgattggaaa caaagtaaaa caagcgcggg atgcagaccc agttggcgcg atagctcaga
    14341 aagtgaaaca tgttgcatca tcaagtagcg agcacgtcca aacggataat gattaatgta
    14401 aagccaccta taaaataggt ggctttttta gataaaattc acaaaaatga cacgaaatag
    14461 aactatatcc gcaataatag tatttttgtt aatacattgg cttgttgttt tgtatattat
    14521 aattattcta aatcaagttg ctaaaataca agatacaagg agtgctatat tttttgaaaa
    14581 aatttgtttt aatttttatt tgttttctca cgctaacaac cattgtccct tggaatacgc
    14641 tcgaaacgaa ggcggcatcc acttcttggc ttgaacaaga attagatggt aatgaagcct
    14701 ttatcactga aacagaaaga gtcttgtcaa aaaatcgtga agatattaca ctcgcagatt
    14761 tagaaacaat acaagaatta gatatttatg gtgatgcttc atcaataccc gacaaaattt
    14821 ctgattataa gaatctcaat actttacttg cccttaatgg aacgatttca gaaattccaa
    14881 ctagtatcac taaactaaca aaactaacaa gaatcaacgt agacaataat aattttcaag
    14941 aatttccgat gattctatta cagatgcctt ctctaagttc tattgagata aatagaaata
    15001 aaattaaaga gattccttca gaaataacca cattatcccc tcatttagga tcgctggatg
    15061 tacgctataa tgagctaatt acgcttccgg ataatatctt cactactgag tgggaaagta
    15121 agctctcatt actaactaca ggaaatcaat tagtttctga cattcctgct gattggttag
    15181 ataattttaa tcaagcagat aacatgctcg aattttacaa caatccacca aatgattatc
    15241 atcaaaaaca agaccagcta acgtatagtg gagcaagaat tgaagtccca ttaaatacag
    15301 atctaaaaac attaactcct gataaaacaa aactgggctt aaaatcaggc agaacgttat
    15361 ttgaacaaca tgaatttatg tattatgatg acgggacctc taataacatt ctaactaacg
    15421 gtgttgctac tgccacagga aatggctata taacaatcaa aagtacttta tcaaccaatt
    15481 ccaacccttt tgcaaaagta cgagttccta tcacagtaac gcccccagta aaaggaggag
    15541 atgttaccgt tcaatataaa gacacaactg gagtagtgtt agcagactcc attactttat
    15601 ccggaaatgt gggcgaaaat tatacgacaa cagctaaaac aattgacggc tattctttaa
    15661 caactacacc aaccaatgct aatggaactt tttcaacaaa cccacaaact gtcacatata
    15721 cttataaaaa agaccctata gcgcaaccag ttactgttaa ttatattgat acagatggaa
    15781 aaacaattgc tcccactgaa acattaagcg gaaatgtggg cgaaaattat acgacaactg
    15841 ctaaaacaat tgacggctat tctttaacaa ctacacctgc caatgctaat ggaacttttt
    15901 caacaaaccc acaaactgtc acatatactt acacaaaaga tcctatagcg caaccagtta
    15961 ctgttaatta tatcgataca gatggaaaaa caattgctcc ttctgaaacc ttaaccggaa
    16021 atattagtga aaactatacg acaacagcta aaacaattga cggctattct ttaacaacta
    16081 cacctgccaa tgccaagggg actttttcga cagaacctca aataattaat tatatctatg
    16141 cgaaaaacgc tgagacagcc caacctatta ccgttaatta tagaaactct acaggtcaaa
    16201 aaatcgcgaa aagtgaggtt ttaactggta atatcggaga atcttactca actcaaccga
    16261 aaacaattgc tggttacaca ctcacaacaa tacctccaaa tgcaaaagga acctttacaa
    16321 caaatgcgca aacagtaact tatatgtata cgccgattgc tatttccgcc ttaccagtga
    16381 cagtgaacta tttagatgaa aatggtaaag aaattgctga ctctgtagtt ctaaatggtc
    16441 gtgtgggaga ggcttataat acactagcta aagaaataga tggctacacg ttgataaaaa
    16501 ctcctacaaa tgctaatggt gtgttttcgg cggaagcaca atcaatcgat tatatctacc
    16561 gtaaaaataa accagtagta atagtaaatc caccaatcaa aaacccgatt attaaaatag
    16621 attctagtac caacgtaata aaagaagaaa cgtctgtctt accaaaaact ggcgattcca
    16681 atccatacaa tgactttttg gcaggaattc tactactatc ttcagcgatg tttctttgga
    16741 aaaatcataa ataaaaaccg aaaagacacc tttcttttcg gctgagattg taggcgaagt
    16801 ataaaaatac tttgcctaca gtttttttat tataatgaaa tgaagtgaag tggaatatat
    16861 ttaccatgag ttactccatg cttaaatcct gcatctcaca gtaatatcct ttaccgccca
    16921 catacacttt ctctatttcg tctttattac ttatgactag attaacgaag atttcggaag
    16981 gcgagtgcaa agaatagccc tgttcaaata cataattttc ttttcgtaag tagtgatttt
    17041 tataaagata acaggccaaa gcaccattag aggtcccagt cgcagcttct tcattaatgt
    17101 cgtatagtgg cgcgaaattc cgacaaataa tttggtcagc attaaaagta tacaggtgca
    17161 ttccgactac ttcataatgc ttactgactt ttttaacctc ttcaaaattc ggctctaggg
    17221 catataaatc tgcttcactt ttaattggaa ttaatatatc ttttaaacca gttgacacaa
    17281 tttgaatagg gtagttagta tttagtaaat ttaagttaaa acaacctgtt aatttattgg
    17341 gg
//
LOCUS       DASDYK010000049        16928 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.049, whole genome shotgun sequence.
ACCESSION   DASDYK010000049 DASDYK010000000
VERSION     DASDYK010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 16928)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16928)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16928
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.049"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            8..1246
                     /locus_tag="U0308_001634"
     CDS             8..1246
                     /locus_tag="U0308_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2316600.1"
                     /translation="MFNKKKTIASLIVLSSLASQIALTPISALADTHDTNNIALLQNT
                     NENVPYKYTSTLTFPTLTNQTQEDYKLEIKLALPTGMNYTGLQVSVGGEDITNQVGTT
                     SFDNSTNTVTFKFDKVTSWDSLSKAKVKFDWKTSYSGEGGEAKIDSLVATATATSEDK
                     AGNKSTSTGSLKPKDISAPVVKADKTEVTYNLGSNVTEEQFLTDINASVTDNYDSTIS
                     LTSNFTSIVNLAVSGDYSVNVQATDKAGNVSNTVNVTVHVATPAPVAGANITVNYLDS
                     DGNKLAESDTLTGTIDSNYQSTSKKISGYTLETTPKNATGTFTDTPQTVDYIYKKDTV
                     TPTPIVDPVNPVDPVDPVVNKPVIVTPNTDQVTTSNSVEKTTYNSLPKTGDTDQSTAT
                     TIFGALLLLISAPLLLFKKK"
     gene            complement(1394..2662)
                     /locus_tag="U0308_001635"
     CDS             complement(1394..2662)
                     /locus_tag="U0308_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HEM2316601.1"
                     /translation="MIMNANLEVNAEVVKESYVYLLSRYLVLRQENFDTKEDKIPYNT
                     LKHNSISPADANFVNPNFDVVYSEAWIAVDDENAVILEVPEIKNRYYTVQLLDGWGEV
                     VTNINERNYPEHPHGKFAFVKKGTNPSVPSDAVKIELPSEKVKVLLRVEQKDDPEGAV
                     KLQKAFKFDAPDNIKIKEPLEIPHFTNAEFLLEEIYSNLEELLATYPDKMPRATEFQD
                     KARQVAAYIELGDEQKAEVRNLIVKEAIPYFTNGAKGFGTQKGGWSVTYVAGAFENDI
                     LARAIINYGGIWANSIQEALYFIGQKGTDNELLTGDKVYKIHFPADELPSELADAFWS
                     VTLYSVPDYHVIPNKLNKFCINNYSGPKLSEDGSLTLYIASEKPADVDPGNWLPSKAG
                     KEFSLNFRLYVPKKEVLEGKVFLPPLEVIK"
     gene            complement(2724..3581)
                     /locus_tag="U0308_001636"
     CDS             complement(2724..3581)
                     /locus_tag="U0308_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GRP family sugar transporter"
                     /protein_id="HEM2316602.1"
                     /translation="MNIVIALIPAVMWGIMPLVVSKIGGKPRQQIIGTTFGALAFAIG
                     VFIFTNPEYTATIIIASFISGAFWSLGQMNQFRAFTQVGVSKTMPLSTGMQLVGTSLF
                     GVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQHKDENSGQNMKKGIITLLISSVG
                     YVGYVVITRWFDISGWDAILPQAIGMVVAGLLFSIKSEEKRFTKQTWLNMIPGVMWAT
                     GNLALLFSNKLVGIATGFSLSQMGVVISTIGGILFLGEKKTKKELILVIIGVVLVIIG
                     GTMIGIAKS"
     gene            3695..3979
                     /locus_tag="U0308_001637"
     CDS             3695..3979
                     /locus_tag="U0308_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEM2316603.1"
                     /translation="MKSTGMVRKIDELGRVVIPIEIRRTMNLNVKDPLEIFTDEDAIV
                     LKKYSAGLVCDVTGEFSVDNKKFVDGKLTLSKEGAAELMEEIKRRFGDTL"
     gene            complement(4024..4905)
                     /gene="rsmI"
                     /locus_tag="U0308_001638"
     CDS             complement(4024..4905)
                     /gene="rsmI"
                     /locus_tag="U0308_001638"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEM2316604.1"
                     /translation="MIKSQKSFSGASQGALYLVPTPIGNLEDMTFRAIRMLKEADIIA
                     AEDTRNTVKLLNHFEITTRMTSYHQFTKENKEDNIIQRMLDGEVVALVSDAGMPSISD
                     PGYELVQSALNANIPVIPLPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQAIEK
                     LAAREETWILYESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNW
                     AMDEEVRGEFCLIIEGNANPPLAEEQLWWQELDIKTHVSTIMEQENVSSKDAIKTVMK
                     ARNLPKREVYSAYHEIK"
     gene            complement(4902..5171)
                     /locus_tag="U0308_001639"
     CDS             complement(4902..5171)
                     /locus_tag="U0308_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEM2316605.1"
                     /translation="MAKASEHFFYVLKCSDNSYYGGYTTDVIRREAEHNAGIRCKYTK
                     TRRPVKVIHFEKFETRSEATKAEAAFKKLSRKNKDAYLIQREESE"
     gene            complement(5155..5907)
                     /locus_tag="U0308_001640"
     CDS             complement(5155..5907)
                     /locus_tag="U0308_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HEM2316606.1"
                     /translation="MEKLELIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYL
                     PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEII
                     EYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVA
                     ASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKDG
                     KPGVKYVPPVIVYDELGEYTPVIKEILYGESE"
     gene            complement(5965..6354)
                     /gene="yabA"
                     /locus_tag="U0308_001641"
     CDS             complement(5965..6354)
                     /gene="yabA"
                     /locus_tag="U0308_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication initiation control protein YabA"
                     /protein_id="HEM2316607.1"
                     /translation="MDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLE
                     NEHLRRRLSLTDEATPEPKAEIEAEHGVMAPNRKEAMQQMIELGEGYDNLVQLYKEGF
                     HVCNVHFGSPRGNDEDCLFCLSLLNKK"
     gene            complement(6365..7198)
                     /locus_tag="U0308_001642"
     CDS             complement(6365..7198)
                     /locus_tag="U0308_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage 0 sporulation family protein"
                     /protein_id="HEM2316608.1"
                     /translation="MLKIVGVRFKDVGKIYYFSPGELEITENQGVIVENAQGIEFGKT
                     VIEPRYVDEEDVVLPLKKVLRIATEADYKCVAENGDSCQKAFLLCDEKIRERELEMSL
                     VDVDYTFDRNKIIFYFTAEGRVDFRELVKDLASVFRTRIELRQIGVRDEAKLLGGIGP
                     CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYEQAKRE
                     MPDVGVKVKTPEGIEARVSGINLLSRILQVSLPEEETVIEYELDELRPYNEFLKQPAK
                     S"
     gene            complement(7204..8196)
                     /gene="holB"
                     /locus_tag="U0308_001643"
     CDS             complement(7204..8196)
                     /gene="holB"
                     /locus_tag="U0308_001643"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEM2316609.1"
                     /translation="MGLQDELTVMQPVVMKIFSKSVRENRLSHGYLFEGARGTGKKRT
                     ALWLAQSLFCLESTETELACGKCANCTRIASHNHPDVHLLEPDGASIKIDQVRALKQE
                     LSKRGMESDQKVVIIYDAEKMTVQSANSLLKFIEEPEGGLLLLFLTTNPGQILPTIQS
                     RLQPVTFKSLTFDSLLASLTAAGISEQKARIYASITGSVEEAKAFEESEWFSEARNVV
                     IKLYEGIHHQGTSPLIIIQESWMPLFKEKDKMALGLELLLLLYRDRLHLTLDENYEPI
                     CTAQKEMLGQDALRKSLSETTGEIEKILAAKSKLDSNMNTQLLMEQLVLEIQGR"
     gene            8413..9249
                     /locus_tag="U0308_001644"
     CDS             8413..9249
                     /locus_tag="U0308_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEM2316610.1"
                     /translation="MNESNGSMELYLREHTEEIINKWLSKIYENENTYTSFVYSPRYK
                     DELRADSEQTADLIISYFAGKKAFFEKLDKWLDNMYARRMENEVPLPEVITTLDKLRR
                     EFVSAVGDFCIHNDEVSKCDFSSSLSMVNHGFDRINEAFSAMYYNDIVKHLEQQHRLI
                     EEISTPVISITDKLAILPLMGSVDRERAEKLSEITANKCVHLGVEQLCIDLSGITYFD
                     DALGEMLTNLVTMLKLLGVEAFISGIQPKMAQQINRVELNLSIPAYHSLKAVLQDQTR
                     TI"
     gene            complement(9292..11034)
                     /locus_tag="U0308_001645"
     CDS             complement(9292..11034)
                     /locus_tag="U0308_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="collagen binding domain-containing protein"
                     /protein_id="HEM2316611.1"
                     /translation="MKKRTTMTSNLKKFGLAFLSVILLVNVLFQTNFVKAATNYGSDF
                     LKTVELLDADGNPQTDFGYYDSIKVHYTWEIPNSTNVKEGDTMEFVLPPELKIVTDLD
                     FSLKDHDGNTVGHVIAKKSTGQVVITFTDFVEKNSNISGYLDFWTNWDKSLVEGNENV
                     PVEFPVNGTTETIDVGVGGKNQIDPDESLYKYGWANAEHPELIQWVVRVNYSKQNIQN
                     AVYEDFIGPKQVVDFNSIKAFHGEFDPDDNFTPGAEVPSSAITQTTEGFKVDLGNLTD
                     SVKISYYTTSTDNGASPNYTNKGQLTGDNFIKQEIEVATPTSGGGGGGEGTTGSVELT
                     KTDDSSQKNPLEGAEFKLVNGAGTIVQTGLKTNIDGKLTISNLKYDTYQLIETKAPQG
                     YVLDASPVEFTIDDAHQSLFLSKENSAIKGSVSLEKVDHDTQNLLADAEFELQDKDGN
                     TLQPNLKTDKMGKLTVTDLLPGEYQFVETKAPTGYILDATPVKFKISTEALNVTVTKE
                     NTKKPEIPKVPVPPKTPEQPDKPDKPEQPDKIISADSKRTTLPKTGDTPLVNGWGILL
                     VAISASGLIALRRK"
     gene            complement(11225..13339)
                     /locus_tag="U0308_001646"
     CDS             complement(11225..13339)
                     /locus_tag="U0308_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="collagen binding domain-containing protein"
                     /protein_id="HEM2316612.1"
                     /translation="MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNT
                     VELLDKDGVPQTDFGYYDNMDVHYTWSIPNSTNVKAGDTMDFTLPSQLALATDLAFDV
                     KDSNGQVVGTATVKRATNQVTLVFSDYVEKHSDIKGELDFWTTFNQKVITGNETVDLE
                     FPLENGTTQIDVKVGEKTPVSPTETLFKYGWVDASNPSLIHWVIRVNYAKVNIPNAVF
                     TDIIGSKQTLNFDSIKAFHGTYSADRIFTAGAAISSTNFSATSDGFSVALGDLTDSVQ
                     ISYTTTATDGGKSTQYDNTAKLAGTDFVPKQTSTWTPASGGGGEGGGTTGSVTLTKED
                     AKTKATLEGAEFKLVDSKGTVLQENITTNASGQLSIADLKFDTYQLIETKAPTGYKLD
                     TTPVEFTIGENNQAITVTKENTLNTGSVELTKLDSATKATLAGATFELQDKEGNTLQT
                     GLTTDENGVLKVTDLVPGSYQFIETSAPTGYKLDNSPVSFEIIASETDQIVKVTKENT
                     LEVGSVELTKLDSATKATLAGATFELQNKEGNTLQTGLTTDENGVLNVTDLVPGTYQF
                     VETKAPIGYELDTTPVVFEIIAGETDQPVKVTKENTLVPPTPVPPTPVPPTPVPPTPV
                     PPTPIPPTPLPPVPYEPTVPPTKPAVPVTPKKSENSEDSPKTTQIRITKSLPKTGDTN
                     SFAGLGVILIALSLSGLLLKRK"
     gene            complement(13624..14436)
                     /gene="yidA"
                     /locus_tag="U0308_001647"
     CDS             complement(13624..14436)
                     /gene="yidA"
                     /locus_tag="U0308_001647"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase"
                     /protein_id="HEM2316613.1"
                     /translation="MYKIIAIDIDGTLLNDAHEITLAVRDSIKAAKAKGVKVVLCTGR
                     PLAGIKKSLIELDLLDEGDYAITFNGAVVLETASEKTLADITLNKTELEEIYAFCHAE
                     NVNVTYFDGKNMYVPSRKITEITCQDSLLLGTPLYHLPVEEAPESIHVSKVMLLDSPE
                     KITDVIKKLPESIKEKFYVVRSVPYNLEFLQKGVNKGSALASLAEKLGVSQSEVMSIG
                     DQENDITMIEYAGMGVAMGNATEHIKEIANYTTTTNNEDGVAQAIQMLILDR"
     gene            complement(14481..16820)
                     /locus_tag="U0308_001648"
     CDS             complement(14481..16820)
                     /locus_tag="U0308_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HEM2316614.1"
                     /translation="MRRVRISVRRLVEFVRRSGSIDNRMTNSDRALEGTKIHQLLQKE
                     AGEEYAAEVRLNLERIVDGIAFSLDGRADGIINSRMIDEIKTTETPMDEITEDFRPLH
                     WAQLICYGFMLAEKSDLAEVTLQLTYYQVVDKEVKQFQRVMSREELSVFVDDLLSQYA
                     IWAKASAAWEMKRNKTIQELTFPYDNYRSGQRELAIAVYRTISSEESLFCEAPTGIGK
                     TMSTLFPGIKAMGEGKTDKLFYFTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKI
                     CFLDERKCEPDHCQFARGYYDRLNEALFDMLQSEEAITRQVVEGYARKYTLCPFELSL
                     DVALFCDVIVCDYNYLFDPVVYLKRFFAEGPGKYTFLVDEVHNLVDRARSMYSATLKK
                     STVMQVKRGLDSKKNKRLLNAINVMNKEMIVLNKKLKDLEKTTYVQKSELVDWNAAVL
                     KFTFVAKEWLPQNTQSELQVDVLDLYFESLRYTAIAEFYDERYVTQVTRNHRDLEIKQ
                     LCLDPAFLLSERLKLGSSSVLFSATLRPIDYYTNVLGGQEDTSRMIFSSPFKQKNMHL
                     LVADYISTKYQMRENSMEAVVDALYALVSGKNGNYIFFFPSFLYLQKVYDLFKEKYPN
                     IRLQKQETAMDEKQREHFLEDFHAENVETLIGFCVLGGVFSEGVDLRGNRLVGAAVVG
                     VGLAQLNHESDLIKDYYNETIGRGFDYAYQIPGMNKVLQAVGRVIRGESDRGVVLLIE
                     ERFSADRYRALFPTHWNHAKTVKSTDDISREVAGFWRNS"
BASE COUNT         4765 a         3483 c         2994 g         5686 t
ORIGIN      
        1 ttaaataatg tttaataaga aaaaaactat cgctagcctt atagttttaa gttctctagc
       61 tagtcaaata gcacttacac ctatttctgc acttgctgat actcacgata caaataatat
      121 tgcattacta caaaatacca atgagaatgt cccatataaa tacacatcca ctcttacatt
      181 tccaacttta acgaatcaaa cccaggaaga ctataaactg gaaataaaat tagccctacc
      241 aactggcatg aactatacgg gcttgcaggt ttctgttggt ggggaagaca ttacaaacca
      301 agttgggaca actagctttg acaattccac taacactgtt acttttaaat tcgacaaagt
      361 aacaagttgg gatagtttat ccaaagcaaa agtaaagttc gactggaaaa cttcttattc
      421 aggtgaaggc ggggaagcaa aaatcgattc tttagttgcg accgcaacag ctacaagcga
      481 agacaaagct ggtaacaaat ctacctctac tggctcttta aaaccaaaag atattagcgc
      541 accagttgtc aaagcagata aaacagaggt tacgtataat cttggaagca acgttaccga
      601 agagcaattt ttaacagaca ttaatgctag cgttactgat aattatgact ccactattag
      661 tcttacaagc aattttactt ccatagttaa tttagcagtg agtggtgatt actcggtcaa
      721 tgttcaagca accgataaag ctggcaacgt ctcaaatact gtaaatgtca ccgttcatgt
      781 agcaactccg gcacctgtag ccggagcgaa cataacggtc aactatcttg atagcgatgg
      841 aaataaactc gcagaatcag acacattgac gggaactatc gatagtaatt accaatctac
      901 aagtaaaaaa attagcgggt acactctaga aaccacacca aaaaatgcaa ctggtacttt
      961 cactgatacc ccgcaaaccg ttgattatat ttataaaaaa gataccgtta ccccaacacc
     1021 tatagttgat ccggtcaatc cagttgaccc agttgaccct gtagtaaata aaccagtcat
     1081 tgtgacacca aatacggatc aagttactac tagtaattca gtagaaaaaa caacttataa
     1141 ttctttaccg aaaacgggtg atacagatca aagtacagca acaactattt tcggagcatt
     1201 gcttctttta atcagcgccc cattactttt atttaaaaag aaataactaa aatcacctcg
     1261 taaaattttt acgaggtgat ttaaaaatag tcctattaca atacaaaaag tgtaagtgtt
     1321 tttattttta tatacaagaa agctaagtat gttaccaccc aaaattggta attgcatact
     1381 tagcttttta ggtttatttt ataacttcca gcggtggtaa gaatactttc ccttccaaca
     1441 cttctttttt cggaacatat agtcggaaat ttagtgaaaa ctcttttcca gccttgcttg
     1501 gtagccagtt tcccggatct acatcagctg gtttttctga cgcaatgtag agcgtcaagc
     1561 tgccatcttc acttagtttt ggacctgagt aattattgat gcagaatttg tttaatttat
     1621 ttgggataac gtggtaatct ggaacactgt ataaggtaac ggaccaaaaa gcatctgcca
     1681 gttctgatgg aagttcatct gccggaaaat ggattttata aactttatcg ccagttaata
     1741 actcattatc cgtacctttt tgaccgatga agtatagtgc ttcttgaata gaattcgccc
     1801 aaataccgcc gtaattaatg attgctcgcg ctaaaatatc attttcgaac gcgccagcta
     1861 cgtaagtaac agaccatccg cctttttgtg taccaaatcc ttttgcacca tttgtaaaat
     1921 atggaatggc ttctttcaca attaagtttc ttacttcagc tttttgctca tcaccaagct
     1981 cgatataggc tgccacttgt cttgctttat cttggaattc agttgctctt ggcattttat
     2041 ctggataagt tgctagtagt tcttccaaat tggaataaat ttcttctaat aagaactctg
     2101 cattagtgaa atgtggaatc tcaagtggtt ctttgatttt tatattgtct ggtgcatcga
     2161 atttgaatgc tttttgaagt tttactgcac cttcaggatc gtctttttgt tctacgcgaa
     2221 gaagtacttt tactttctct gatggtaatt cgatttttac agcgtcactt ggaacggaag
     2281 gatttgttcc ttttttaacg aaagcaaatt ttccatgtgg atgctctgga tagttacgtt
     2341 cattgatatt tgttaccact tcgccccagc cgtctaaaag ttgcacagta tagtagcgat
     2401 ttttaatttc tggtacttct aaaataacgg cattttcgtc atctacagct atccaagctt
     2461 ctgaataaac cacatcaaag ttcggattta caaaatttgc atctgctggt gaaatcgaat
     2521 tgtgcttaag tgtgttatat ggaattttat cttcttttgt atcaaaattt tcttggcgta
     2581 aaacgagata tcgcgataat aaataaacat aggattcttt tacaacctca gcatttactt
     2641 ctaaattcgc attcattatc agtataacca cctttaattt agattaattt aagtatagca
     2701 ttgtatcctc tcgaaagctg ttcttagctt tttgcaattc caatcatcgt accaccgata
     2761 attactaaga caaccccgat aatgaccaga ataagttctt tcttggtttt cttctctcct
     2821 aggaaaagga ttccaccaat ggtcgaaatg acaacaccca tttgtgagag cgaaaaacct
     2881 gtagcgattc caactaattt atttgagaat agtagagcca agttaccagt agcccacatc
     2941 acccctggaa tcatatttaa ccaggtttgc tttgtaaaac gtttttcttc agacttaata
     3001 gaaaataata atcctgcgac taccatccca attgcttgag gtaaaatcgc gtcccaccca
     3061 ctaatatcaa accaacgagt gataacgaca tatcctacat aacctacgga tgaaataagt
     3121 aaagtgataa ttcctttttt catattttgg ccggaatttt cgtctttatg ttgttgataa
     3181 cttgttaaga aaatcccgat aataattaat gctaatgcgg aaaatcctaa tactaatttg
     3241 gaagttgtac cccattcatg aaaagcaaat acaccaaaaa gcgatgtacc tactaactgc
     3301 attcctgtcg aaagtggcat tgtttttgat acgcctactt gtgtaaatgc ccggaactga
     3361 ttcatttgac ctaagctcca aaatgcccct gaaataaaac tagcaataat aatggttgct
     3421 gtatattctg gatttgtaaa aataaaaact ccgattgcga aagctagtgc gccgaatgtt
     3481 gtaccaatga tttgctgcct cggtttaccg ccaatttttg aaacaactaa tggcataatc
     3541 ccccacatca ctgccggaat taatgcgata actatgttca tttttattcc ccctaattct
     3601 tctgcttatg gtctataccc ttttcctcat gaaatcattc ctattcccgt aattatctgt
     3661 taaaatgaat taaaattatc aagaaggtga gaaaatgaaa tcaactggaa tggtaagaaa
     3721 aatcgacgaa cttggtcgtg tggttatacc gattgaaata agaagaacga tgaacctaaa
     3781 tgtaaaagac cctttagaaa tatttacaga tgaagatgcg attgtattga aaaagtattc
     3841 cgctggcttg gtttgtgacg ttaccggaga attttctgtt gataacaaga aatttgtgga
     3901 cggtaaattg acactcagta aagaaggcgc tgcggaatta atggaagaaa ttaaacgccg
     3961 ctttggtgat acattataaa aaaaatcatg cgcgagttcc cattaaagga ttcgcgcatg
     4021 attttatttt atttcatgat aagcagagta aacttctcgt tttggtaaat ttctcgcttt
     4081 cataaccgtt ttaattgcat ctttagaact aacattttcc tgttccatta tggtgcttac
     4141 gtgcgtttta atatcgagtt cttgccacca gagttgctct tctgcaagcg gtggattggc
     4201 atttccttca ataatcaagc aaaattctcc gcgaacttct tcgtccattg cccagtttaa
     4261 cgcatcttca accgttccac gtaaaaattc ttcaaatctt tttgtgagct ctcgacacaa
     4321 gacaattttc cgatcatttc cagtgatttt gatgattgct tttagtgttt cttttaaacg
     4381 atgtggtgat tcatataaaa tccacgtttc ttcgcgcgcc gctaattttt caatcgcttg
     4441 agtacgttct ttgttttggc gtggaagaaa tccgtaaaag taaaacggct gcggggcaag
     4501 accagatgca atcagtgcag ttaatgcagc attggctcct ggtagaggga tgacaggaat
     4561 attagcattt agcgcacttt gaacaagttc gtatcccggg tcagaaatag atggcatccc
     4621 cgcatcacta acaagcgcca ccacttcacc gtctaacatc cgctgaataa tattatcttc
     4681 tttattttcc ttcgtaaact gatggtagct cgtcattcgg gttgtaattt caaaatgatt
     4741 taaaagtttc acggtgttcc gcgtatcttc cgctgcaata atatccgctt ctttaagcat
     4801 gcgaattgca cgaaaagtca tatcttctaa attaccaatc ggcgttggca ctaaatataa
     4861 tgctccttgg ctggctccac tgaaactctt ttggcttttt atcattcgga ctcctcccgt
     4921 tgtattaaat aggcgtcttt atttttacgt gataattttt tgaacgcagc ttctgctttt
     4981 gtagcttcac ttcttgtttc gaatttttca aaatgaatga cttttaccgg gcgacgtgtt
     5041 tttgtatatt tacatctaat tcccgcatta tgttccgctt ctcggcgaat aacatctgtt
     5101 gtatagccac cataatagga attgtcacta cattttagca cataaaagaa atgttcactc
     5161 gctttcgcca tataaaatct ccttaattac tggtgtatat tcccctagct catcatatac
     5221 gataacaggt ggaacatatt tcacgccagg tttcccgtct ttgattcctt ctacaagtac
     5281 cgtattcgct tctctatctg agcgcgggtg cacgaattga atgcgtttcg gttccaagcg
     5341 atattttctc attatatcaa tgatgtctag taatcgttcc ggacgatgaa caaaattcgc
     5401 ttttccacct tgttttaaaa ggcttgcggc tacacgaata gtatcctcta gcgtacacat
     5461 aacttcatgg cgagcaatcc gaaaatgttc attggtattt ttcaaacttg tatccggggt
     5521 tgcaaaataa ggtggattac aggtaacaat gtccgcgcgc tcttttggaa taagatctgt
     5581 aatttttttc aaatcatatt cgattatttc gatttggtct tccagttgat tataagcaac
     5641 acttcttttc gccatatctg ccagacgttc ttgaatttca acaccaacta ttttcgcttt
     5701 tgttcgcgta ctaagtagta aaggaataat cccatttccg ctacacaaat caattatttt
     5761 ccctttacgg attggtaaat aactaaattt agcgaggaga accgcgtcta tcgagaaaga
     5821 aaataccgat gggctttgaa taatccgcaa attttctgct agtaaataat ctagtctttc
     5881 atcaccaatt aattcgagtt tttccaaatg attcaccttt tctagcaaaa agcccttctc
     5941 ttgaattgag aaaggcccgt catgttattt tttattgagc aaggataagc aaaataaaca
     6001 atcttcatca ttaccacgcg ggctgccgaa atgtacattg caaacatgaa atccttcctt
     6061 gtaaagttgg acaagattgt cataaccttc cccaagttca atcatttgct gcattgcttc
     6121 cttacgatta ggcgccatca caccgtgttc cgcctctatt tcggctttag gttctggtgt
     6181 cgcttcatcc gtcaaagaaa gtctgcgtcg caaatgttcg ttttcaaggt ttaatcggtt
     6241 attttcttcc aacatttcgc ctaagtttgt ctttagatct ccaagttgct gatacaattc
     6301 gccaatttgc tcctccatat tactgactga gtcaaaaata gcttttttat ccaatttttt
     6361 cacctcaaga ctttgccggt tgttttagaa attcgttata tggacgtaac tcatccaact
     6421 cgtattctat aaccgtctct tcttcgggca aactcacttg taggattcta gacagcaagt
     6481 tgattcccga aacacgtgct tctatgcctt ctggagtttt tacttttaca ccaacatctg
     6541 gcatttcacg tttagcttgc tcatattcat cgttctcata tttcaagcaa cacattaatc
     6601 gtccacataa accagaaatt ttcgttgggt taagggacag gttttggtct ttcgccattt
     6661 tgatggaaac tggttcgaaa tcacctaaga aagtggagca gcagagcata cgaccgcatg
     6721 ggccaatccc accgagcaat ttcgcttcat cacgtacacc aatttggcga agttcgatgc
     6781 gagtccgaaa aacagatgct aaatctttca cgagctcccg gaaatcgacg cgaccttctg
     6841 cggtgaaata aaaaatgatt ttattacggt caaatgtgta atcaacatca actaaactca
     6901 tttcaagttc gcgctcgcgg atcttttcat cacaaagtaa aaaggctttc tgacacgagt
     6961 cgccattctc agcaacgcat ttataatccg cttctgttgc gatacgcagt actttcttaa
     7021 gtggtaaaac gacatcttct tcgtccacgt agcgcggttc aatgactgtt ttaccaaatt
     7081 caattccttg tgcattttca acaataacac cttggttttc tgtgatttcc agttcgccag
     7141 gtgagaaata atatatttta ccaacgtctt taaaacggac gcctacaatt ttaagcatag
     7201 cgattacctc ccttggattt ccagaactaa ctgctccatt agaagttgcg tgttcatatt
     7261 ggaatccagt tttgatttcg cagcgagaat cttctcgatt tcccctgtgg tttcggacag
     7321 tgatttacgc agcgcatctt gtccgagcat ttctttttgc gcagtacaaa taggttcgta
     7381 gttctcgtca agtgtaaggt gtagccggtc gcggtacagc agtaacaata attcgagccc
     7441 aagcgccatc ttatctttct ctttaaaaag tggcatccat gattcttgaa tgataattaa
     7501 tgggctggtt ccttgatggt gaattccttc atataacttg atgacaacat ttcttgcctc
     7561 actaaaccac tcactctctt caaaagcctt cgcttcttcc acactcccag taatgctagc
     7621 ataaatccgc gctttttgtt cggaaatgcc tgctgctgtt agtgatgcga gtaaactatc
     7681 aaaagtcagt gatttgaatg tgacaggttg cagtcttgat tgaatcgttg gcaaaatttg
     7741 cccggggttt gttgttaaaa ataataataa caaaccgcct tctggttctt ctataaattt
     7801 cagcagacta ttggctgatt gaacagtcat tttttctgca tcgtaaatga taactacttt
     7861 ttgatccgat tccattccgc gtttactaag ttcttgcttc agcgcgcgaa cctgatcaat
     7921 cttaatacta gctccatctg gctctagcaa atgaacatcc ggatgattat gacttgctat
     7981 tctcgtgcaa ttggcacact tcccacaagc aagctcggtt tcagtgcttt ctaaacaaaa
     8041 aagactctga gctaaccaaa gtgctgtgcg tttcttgcct gtacctcttg ctccttcgaa
     8101 taaatagccg tgagataatc gattttcgcg gacacttttt gaaaaaatct tcatgaccac
     8161 tggttgcatc actgtaagtt catcctgtaa tcccacaaaa aacttccttt ctatccatat
     8221 tgtaatatta taccatgacc aagcttaaat agcttcggaa ttttaacaaa aaaataacgt
     8281 tggattggtt aactaatatt acaatttcaa taaattagtt atttttctaa aatttaattg
     8341 gacagtacaa cgttttgagc atagaataaa gaaaagtagt tattatactt agacttaaag
     8401 gggttgtctg gtatgaatga atcgaatgga agtatggagc tatatttaag agaacatacc
     8461 gaagaaatta ttaataagtg gctatccaaa atttatgaaa acgaaaacac gtatactagt
     8521 tttgtttact cgccgcgtta caaagatgaa ctgcgcgctg acagtgaaca aacagcggac
     8581 ttaatcattt cttatttcgc tggtaaaaaa gcattttttg agaaactcga caaatggctg
     8641 gataacatgt acgcgcgtcg catggaaaat gaagtaccat tacctgaagt tattaccacc
     8701 cttgataaac tacgccgtga atttgtttct gctgttggtg atttttgtat tcataatgat
     8761 gaagtgtcta aatgtgattt ctcatcaagt ctgtccatgg ttaatcacgg gtttgaccgg
     8821 ataaacgaag ccttctccgc catgtattac aatgatatcg tcaaacattt agaacaacaa
     8881 catcgtttaa tagaagaaat tagcacaccc gtcatttcta tcacggacaa attagcgatc
     8941 cttcctttga tggggagcgt cgaccgtgaa agagcagaaa agttatccga aatcacggca
     9001 aacaaatgcg tacacttagg cgtggaacaa ttgtgtattg atttatcagg aattacttat
     9061 tttgatgatg cacttggaga aatgcttacc aacttagtga cgatgcttaa acttcttggt
     9121 gtcgaggcat ttatttctgg catccaacca aaaatggcac aacaaattaa tcgtgttgaa
     9181 ttaaacttat ctattcctgc ctatcattcg ttaaaggctg tcttacaaga tcaaactaga
     9241 actatataag aaaaaccgta agcgattgta ttatcgctta cggttttttg attattttct
     9301 tctaagtgca attaatccac tcgctgaaat ggctacgagc agtattcccc aaccattaac
     9361 aagtggtgta tcccctgttt ttggtaaagt cgtccgtttg ctatctgcgc ttattatttt
     9421 atctggttgt tctggtttat ccggtttatc cggttgttct ggtgtttttg gtggtactgg
     9481 tacttttggt atttctggtt ttttcgtgtt ctcttttgtt acggttacgt ttagtgcctc
     9541 tgtgctgatt ttaaatttga ctggagtagc atctaaaata tagcctgttg gcgcttttgt
     9601 ttcgacaaat tgatactcgc ctggaagtaa atccgtcacc gttagtttgc ccattttgtc
     9661 tgttttaagg tttggttgta gtgtgttgcc atctttatct tgtagttcaa attcggcatc
     9721 agctagtagg ttttgtgtgt cgtgatcgac tttttctagt gaaacggatc ctttgatggc
     9781 agagttttct ttggatagaa ataatgattg gtgcgcgtca tcaattgtaa attctactgg
     9841 agacgcatca agcacatatc cttgtggagc ttttgtttcg attagctggt atgtatcata
     9901 tttcagattt gaaatagtta gtttaccatc gatattagtt tttagtcctg tttggactat
     9961 cgttcctgct ccgttgacta atttaaactc ggcaccttct aatggatttt tttgagacga
    10021 atcatctgtt ttcgttaatt caacagatcc ggttgtccct tctccacctc cgccaccacc
    10081 tgatgttggt gtcgcgactt cgatttcttg cttgataaag ttatctcctg tcaattgccc
    10141 tttatttgtg tagttaggtg atgctccgtt atcggtagaa gttgtatagt atgaaatttt
    10201 gacagaatct gttaaatttc ctaggtcgac tttgaatcct tccgttgttt gagtaattgc
    10261 cgatgatggt acctcggctc ctggcgtgaa gttatcatcc ggatcaaatt caccgtggaa
    10321 tgctttgata gaattaaaat caacgacttg ttttggtcca ataaaatctt cataaacggc
    10381 attttgaatg ttttgtttcg aatagttaac tcgaacgacc cattggataa gctcaggatg
    10441 ttcagcatta gcccagccgt atttatataa actttcatcc gggtcaattt gatttttacc
    10501 accaacgccc acgtcaattg tttctgtggt accatttact ggaaattcaa ctggaacatt
    10561 ttcatttcct tctactaatg atttatccca attagtccaa aaatcgagat atccactaat
    10621 attggaattt ttttcaacaa agtctgtaaa tgtaataact acttgcccag tcgatttttt
    10681 agcaatcacg tgacctaccg tgttgccatc gtgatctttc aaagaaaagt ctaaatctgt
    10741 aactatcttc agctctggag gtaacacaaa ttccattgtg tcgccttcct tcacattagt
    10801 tgaattgggg atttcccaag tatagtgaac cttgatgctg tcgtaataac cgaagtccgt
    10861 ttgaggattg ccatctgcgt ctaataattc cacagttttc aaaaaatcgg agccataatt
    10921 agttgctgct ttaacaaagt tagtctgaaa taaaacgttt acaagcaaga taacgctaag
    10981 aaaggctaat ccgaatttct ttagattaga cgtcattgtc gtgcgtttct tcataaaaac
    11041 catccttttt taattaattt caatcataat atattgctaa ttcatagtga ttatacatta
    11101 ttttttctaa aaatcggttc tccttcacaa aaaaagcctt ctaattgtga acattttgtg
    11161 acaattgcaa ttcttaaaca acctaattaa aacaggctta gataattatc taagcctgtt
    11221 ttttctattt tcgtttcagc agaagaccac ttaatgacaa ggctattagg attactccta
    11281 agccagcaaa actatttgta tctcctgttt taggaagact tttagttatt cttatctggg
    11341 tcgtttttgg actatcctcg ctgttttctg atttcttagg cgtaactggt actgctggtt
    11401 ttgttggtgg cacagttggt tcgtatggta ctggtggtaa cggagtaggc ggtattggtg
    11461 ttggtggcac tggtgttggt ggtactggtg ttggtggcac tggtgttggt ggcactggtg
    11521 ttggcggtac taatgtgttt tcttttgtta cttttaccgg ctggtcagtc tcaccagcga
    11581 tgatttcaaa aacaactggc gtcgtatcaa gttcatatcc aattggggct tttgtttcga
    11641 caaattggta tgttcctggt actaaatcag ttacgtttaa aacgccattt tcatccgtag
    11701 ttaaaccagt ttgtaatgtg tttccttctt tattttgtaa ttcgaatgtt gctccggcta
    11761 gggttgcttt ggttgctgag tctagctttg ttagttccac ggagccaact tctagtgtgt
    11821 tttcttttgt tacttttact atttgatctg tctcgcttgc gatgatttca aaacttactg
    11881 gactgttgtc taacttgtag cctgttggag cacttgtttc gataaattgg taactgccgg
    11941 gtactaaatc agttactttt agaacgccat tttcatctgt agttaaacca gtttgtaatg
    12001 tgtttccttc tttatcttgt aattcgaatg ttgctccggc tagggttgct ttggttgctg
    12061 agtctagctt tgttagttcc acggagcctg tgttaagcgt attttctttt gtcacggtaa
    12121 ttgcttgatt attttcacca atagtaaatt caactggtgt tgtatcaagt ttgtagcctg
    12181 tcggggcttt tgtttctatt aattggtagg tgtcaaattt cagatcagca atgctaagtt
    12241 gtccgctcgc atttgttgta atgttttctt gtagcacagt gccttttgaa tccaccaatt
    12301 tgaattccgc accttcgagg gttgcttttg ttttcgcatc ttctttcgtg agtgttactg
    12361 aaccggttgt cccgccgcct tcaccgcctc cgcctgatgc aggtgtccaa gtggacgttt
    12421 gcttgggtac aaaatcagtt ccggctagtt tagcggtatt atcgtactgg gtagacttcc
    12481 cgccatctgt tgcggttgtt gtataagaaa tttgcacaga atccgttaaa tctcctagtg
    12541 ctacactaaa cccgtcactt gttgcggaaa aattggtgct ggaaatagcc gcgcctgctg
    12601 taaatatccg atctgcggaa taagttccat gaaaagcttt gatagaatca aaatttaatg
    12661 tttgttttga gccgatgata tccgtgaaaa cggcatttgg aatgttcact ttggcgtagt
    12721 tcactcgaat aacccaatga atcagacttg gattactagc atccacccaa ccatatttga
    12781 aaagcgtttc tgtcgggcta actggggttt tctcaccaac ttttacatct atttgcgtcg
    12841 ttccattttc aagaggaaat tctaaatcaa ctgtttcatt tccagtaatt actttttggt
    12901 taaaagtggt ccagaaatcc agttctcctt taatatcgga atgtttttct acataatcac
    12961 tgaaaacgag ggtaacttga ttggttgccc tttttacagt ggccgttcca actacttgac
    13021 cattactatc tttcacgtca aaagcgagat cagttgcgag cgccaattgg cttggcagtg
    13081 tgaaatccat tgtgtctcca gcttttacgt ttgttgaatt cggaatagac catgtgtagt
    13141 gcacatccat attgtcatag tagccaaaat ctgtttgcgg cacaccgtct ttgtctaaga
    13201 gttctactgt gtttaaaaac tgagaaccat aactcgttgc cgctttcaca actgttgttt
    13261 ggaagattgt gctagcgacg attaaaatac ttaagaaagc taacccaact ttttttaaaa
    13321 agtttccgtt tttactcatt acaaattcat cctttactaa tgaagttttg ttattatcac
    13381 atatcatatg acaattgagt aactccaagc tatatcactt ttcggaagta ctgctcctaa
    13441 aacacccact ttatgaactt ttagtgactt tttttagggc tatttatcat aaagtactta
    13501 attaaacaaa aaagccgaaa ctcctttata gaaagtttcg gctttttata gtgactcgca
    13561 tgctttttaa atctccattt acactgtttg acaatattct gtttttacta ctattcacta
    13621 tttttagcgg tccagaatga gcatttgtat agcctgtgcc acaccatctt cattattagt
    13681 agttgttgta tagttagcga tttctttaat atgctctgtc gcattaccca ttgcaactcc
    13741 cataccagca tactcaatca tggtaatatc attttcttgg tcaccaatac tcatgacttc
    13801 actttgagac accccaagtt tttctgctaa actagcgagc gctgatcctt tatttacgcc
    13861 tttttgcaag aactctaggt tataaggaac actccggaca acgtaaaatt tttctttgat
    13921 actctctggt aattttttta taacatcggt aattttttca ggtgagtcta atagcataac
    13981 cttggaaaca tgaatagatt caggcgcttc ttctacaggt aaatgatata gtggcgtacc
    14041 aagtagcagg gaatcttgac aagtgatttc tgtgattttt cggcttggta catacatgtt
    14101 tttcccatca aaataagtga cgttaacatt ttccgcatga caaaatgcat aaatttcttc
    14161 tagttcagtt ttatttaagg ttatatctgc taatgttttt tctgaagctg tttctaacac
    14221 gaccgcccca ttaaacgtaa ttgcgtaatc cccttcatct aaaagatcta gttcaattaa
    14281 gcttttttta attcctgcaa gtggacggcc tgtacataat actactttta ccccttttgc
    14341 tttcgcagct ttaatagagt cacgcacggc tagtgtgatt tcgtgtgcgt cgtttaataa
    14401 agtgccatca atatctatcg cgataatttt atacataatt tcctcccaaa atgactaatt
    14461 acttctattc tactagaaaa ttagctattc cgccaaaatc cggccacttc tcgggagata
    14521 tcgtctgtgc tcttcactgt tttcgcatga ttccagtgcg tagggaacaa cgctcggtaa
    14581 cgatcggcag aaaatcgttc ttctattaac aacactacgc cacgatctga ttctcctcga
    14641 ataacccggc caactgcttg aagcacctta ttcattcctg gtatctgata tgcataatca
    14701 aatccccgac caatcgtttc attataataa tctttaatta aatcagattc gtgattcaat
    14761 tgcgcaagtc ctacaccaac gacagccgca ccgactaatc ggttcccgcg aagatctacc
    14821 ccttctgaaa aaacgcctcc taaaacgcaa aagccaatca aggtttctac attctctgca
    14881 tgaaaatctt ctaaaaaatg ctctcgctgc ttttcatcca tagcagtctc ttgtttttgc
    14941 aacctgatgt taggatattt ttctttaaat aaatcatata ccttttgtaa atatagaaat
    15001 gatggaaaga aaaatatata gttgccgttt ttcccagaga cgagagcata gagagcatct
    15061 acgacagctt ccatactatt ttcacgcatt tggtatttcg tactaatata atccgctact
    15121 agtaaatgca tgtttttttg tttaaatggc gaagaaaaga tcattctact agtgtcttct
    15181 tgaccaccaa gtacatttgt atagtaatct attggtcgaa gcgttgctga aaaaagcacc
    15241 gaactgcttc cgagttttag cctctctgat aataagaacg ccggatccaa acatagttgt
    15301 tttatttcta aatccctgtg atttctcgta acttgtgtga cgtaacgctc atcataaaac
    15361 tccgcaatgg cagtatatct taaactttca aaataaaggt ccaacacatc cacttgtaat
    15421 tctgactgag tattttgcgg caaccattcc ttcgctacaa aggtgaattt taacacagct
    15481 gcattccaat caacgagttc acttttttgg acataagtcg ttttttctaa gtcctttagt
    15541 tttttgttaa gcacaatcat ttctttattc atcacattta ttgcatttag caatcgtttg
    15601 ttcttttttg aatctagtcc ccgtttgact tgcataactg ttgatttttt taatgtcgcc
    15661 gaatacatcg agcgcgcacg gtctactaaa ttatgcactt catctacaag aaaagtatat
    15721 tttcccggtc cttctgcaaa aaagcgtttt aagtaaacta ctgggtcgaa taaataatta
    15781 taatcacaaa ctattacatc acaaaaaaga gccacatcca gcgataattc aaatggacaa
    15841 agtgtgtatt tccgggcata accctcaaca acttgacggg taatcgcttc ttcggattgc
    15901 aacatatcaa acaacgcttc gttcaaacga tcataataac cacgcgcaaa ttggcaatga
    15961 tctggttcac atttccgctc gtctaaaaaa catatcttat ccttcgcagt tattgtaaca
    16021 ctccttgcag ccagtccttt acgacgcatc tcatctagtg catcttcggc aacttgtcgc
    16081 gtgattgttt ttgcagtaaa gtaaaataat ttatccgttt tcccttcacc catagcttta
    16141 ataccgggaa acaaggtcga cattgttttg ccgatacctg tgggtgcttc acaaaacaaa
    16201 ctttcttctg aagatattgt tcggtacacc gcaatggcga gctctctttg cccacttcga
    16261 tagttgtcgt atggaaacgt taattcttga attgttttat ttcgtttcat ttcccaagcg
    16321 gcagatgcct ttgcccaaat agcatattgg gaaagtaaat cgtccacaaa aacactcagt
    16381 tcctcgcgac tcattacacg ttgaaattgt tttacttctt tgtcaactac ttgataatac
    16441 gttaattgca gagtaacttc tgccaaatcg gacttttctg caagcataaa tccataacaa
    16501 ataagttgcg cccagtgaag aggtcgaaaa tcttcggtaa tttcatccat tggcgtctct
    16561 gttgttttaa tttcatcaat catccgacta tttatgatgc catctgcgcg tccatcaagc
    16621 gaaaaagcaa ttccgtccac tattcgttct aggtttagcc gtacttctgc ggcatattct
    16681 tccccagctt ctttttggag taattgatga atttttgttc cttctaaggc gcggtctgaa
    16741 tttgtcatcc ggttatcaat actaccgctt ctccgcacaa actctactaa acgcctaact
    16801 gaaatacgca ctctcctcat caatagtcct cctttacaat ccagttgaat tataacacag
    16861 aacctacgtt cgtaacaatt caataaaaaa tactaatttt ggacttttat gataagacat
    16921 tctaaact
//
LOCUS       DASDYK010000050        16571 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.050, whole genome shotgun sequence.
ACCESSION   DASDYK010000050 DASDYK010000000
VERSION     DASDYK010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 16571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16571
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.050"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(292..1218)
                     /gene="cysK"
                     /locus_tag="U0308_001649"
     CDS             complement(292..1218)
                     /gene="cysK"
                     /locus_tag="U0308_001649"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEM2316615.1"
                     /translation="MTIANSITDLIGKTPIVKLNRLPEAGSADVYVKLEFQNPGGSVK
                     DRIANAMIESAEKSGALKPGDTIIEPTSGNTGIGLAMVAAAKGYQAIFVMPETMSLER
                     RKLLQAYGAKLVLTPGPDGMKGAIAKAEELAKENNYFVPQQFHNPANPAVHEETTGPE
                     IVEAFGKDGLDAFIAGVGTGGTVTGVGHVLKKNYPDVKIYALEPEESPVLSGGSPSPH
                     KIQGIGAGFVPDTLDTKVYDGILKVSSEDALETAREVAKKEGILVGISSGATVKAALD
                     LAKELGAGKKVLAIVASNGERYLSTPLYNFED"
     gene            complement(1334..2218)
                     /gene="hslO"
                     /locus_tag="U0308_001650"
     CDS             complement(1334..2218)
                     /gene="hslO"
                     /locus_tag="U0308_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEM2316616.1"
                     /translation="MSDYLVKALAYDGMARVYAAVTTETIKEAQRRHDTWSVSSAALG
                     RTMTGTLFLGAMQKEDQKITVKIEGDGPIGPIVADSNAQGQIRGYVTNPHVHFSELNE
                     AGKLDVRRGVGTSGMLSVVKDLGFGENFTGQTPIVSGEIGEDFTYYLATSEQINSSVG
                     VGVLVNPDDTIEAAGGFMLQLLPGATDEIIDEIEKNLTALPTVSRMIEAGETPESILA
                     KLAGGEDKLQILEKIPVSFECNCSKERFGSAIISLGKEEIRSMIEEDHGAEAECHFCR
                     NTYDFSEEELEKLYEEAK"
     gene            complement(2234..3013)
                     /locus_tag="U0308_001651"
     CDS             complement(2234..3013)
                     /locus_tag="U0308_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEM2316617.1"
                     /translation="MILVIDVGNTNCTVGVYEKQKLLKHWRMTTDRHRTSDELGMTVL
                     NFFSYANLTPSDIQGIIISSVVPPIMHAMETMCVRYFNIRPLIVGPGIKTGLNLKVDN
                     PREIGSDRIVNAVAASEEYGTPVIVVDFGTATTFCYIDESGVYQGGAIAPGIMISTEA
                     LYNRAAKLPRVDIAESNQIIGKSTVASMQAGIFYGFVGQCEGIIAEIKKQSNASPVVV
                     ATGGLARMITEKSSAVDILDPFLTLKGLELLYRRNKPTTEK"
     gene            complement(3129..5204)
                     /gene="ftsH"
                     /locus_tag="U0308_001652"
     CDS             complement(3129..5204)
                     /gene="ftsH"
                     /locus_tag="U0308_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEM2316618.1"
                     /translation="MNRFFRNAIFYVIIFLVIIGIVASFNSNKEAAKDISYSEFVSKL
                     EDGKVKSVEIQPDRSVYTINGEFKSSDKSSDDKKTGLGQSKTSSTAFTTYALNSDTSL
                     GDLQKTLDKEDVKTTIVPAKQNSGWVTFLTSIVPFVIIFILFFFLMSQSQGGGGGKVM
                     SFGKSKAKLYNDDKKKVRFTDVAGADEEKQELVEVVEFLKDPRKFADLGARIPKGVLL
                     VGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCII
                     FIDEIDAVGRQRGAGMGGGHDEREQTLNQLLVEMDGFGGNEGIIIIAATNRADVLDPA
                     LLRPGRFDRQIMVDRPDVKGREAVLRVHARNKPLAKSVDLKAIAQRTPGFSGADLENL
                     LNEAALVAARSDKKEIDMSDLDEASDRVIAGPAKKNRVISEKERRTVAYHEGGHVIVG
                     MVLDEAEVVHKVTIVPRGQAGGYAVMLPKEDRFLMTKAELMDRITGLLGGRVAEEVTF
                     GEVTTGASNDFERATELARRMVTEWGMSDKIGPLQFTSGNGQVFMGRDFGSDKGYSDK
                     IAYEIDTEVQSLIRYCYDRAKTIITEHQEQHKLIAETLLKVETLDARQIRSLFDDGVM
                     PPDIDTIDVEAEYPSEKDEEVAGKSFEEEKEELKEEEKIEEPKEEPKEVTSEDAPNIE
                     QTPNDKKDE"
     gene            complement(5551..7497)
                     /locus_tag="U0308_001653"
     CDS             complement(5551..7497)
                     /locus_tag="U0308_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA lysidine(34) synthetase
                     TilS/hypoxanthine phosphoribosyltransferase HprT"
                     /protein_id="HEM2316619.1"
                     /translation="MDDTDKRVHKYIEKHDLIRSDDKLLVAVSGGPDSLALLHFLWNS
                     NLVPKEAISVAHINHHLRENAANEQNVVEAFCESQGIPFYIEEVDVKSRAESLQKGIE
                     ETARIVRYDFFEKVMAEKKINKLALAHHADDQIETILMRLVRGSASIGWSGIQPKREL
                     KGGQAIRPFLPITKAEIIDYAQKHELAYEIDESNTSQEYTRNRYRAQLLPFLKQENPA
                     VYSHFERFSEETSEDFQFLEALASDLLKKNLIKNGKRTTLLLTNFKNEANPLQRRAIH
                     LLLRYLYNEDASFITVNHIYQIIQMIQSDNPSSSIDLPNKLVANRAYDKLHFQFGERE
                     APSEFYHQLELNDRIELDNKASIRLKLKSSVVQTNGLNGMLLDAEEITLPLIVRNRVN
                     GDRMTMKGQAGSKKLKDIFIDAKIPRQERDKLPVITDYTGKILWVPGVKKSAYDREFS
                     RSKKQYIIRYTRNIGGNESMHNDIQKVLISEDELQEKIRELGRELTTEYEGRNPLVVG
                     VLKGATPFMTDLLKRVDTYLEMDFMDVSSYGNGTVSSGEVKIIKDLNASVEGRDVLVI
                     EDIIDSGRTLSYLVDLIKYRKAKSVKLVTLLDKPAGRNVEIEADYVGFVVPNEFVVGY
                     GLDYAERYRNLPYIGILKPEIYSE"
     gene            complement(7604..8032)
                     /locus_tag="U0308_001654"
     CDS             complement(7604..8032)
                     /locus_tag="U0308_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein S1"
                     /protein_id="HEM2316620.1"
                     /translation="MSIEVGNKLQGKVTGITNFGAFVELEGGKTGLVHISEVADNYVK
                     DINDILTVGDEVTVKVMNIGDDGKIGLSIRKAVDRPDRPEKSYDRKPKYSKKPAGNYV
                     KPAESFEDIMSKFLKDSDERLTTIKRQTESKRGGRGAKRG"
     gene            complement(8183..8569)
                     /locus_tag="U0308_001655"
     CDS             complement(8183..8569)
                     /locus_tag="U0308_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEM2316621.1"
                     /translation="MKKAKSKVARIENRYIKDTATMEKTRSRRRIALFRRLAFMAIIF
                     AVVGGLLTITYTKQVLTLKEKKEKQVQVDKKMVAMKDEQDSLNEQIKKLHNDDYIAKL
                     ARSEYYLSKDGEIIFNIPEENSKQKE"
     gene            complement(8798..9076)
                     /locus_tag="U0308_001656"
     CDS             complement(8798..9076)
                     /locus_tag="U0308_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEM2316622.1"
                     /translation="MATTMRLDKYLKVSRLIKRRTVAKEVAEKGRIAVNGVTAKPGTN
                     VKSGDELVIRFGPKIVTAKIERLEENAKKEQATEMYTIIKEERTDESR"
     gene            complement(9100..10689)
                     /locus_tag="U0308_001657"
     CDS             complement(9100..10689)
                     /locus_tag="U0308_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEM2316623.1"
                     /translation="MPERSMKRLMKGAAWLTAASLISKILSAVYRVPFQNMVGDVGFY
                     IFQQVYPIYGIAMTLALGGFPVVISKMLAEAEGDVRRQQIIMRAVSRMLRIVSIVIFA
                     FLFLFANPIAIMMGDPALSELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQTVE
                     QIIRVAIILIGAGLALHFNFDLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVRLGEGI
                     QPAVFTNKEEKVGIGRTFLRQSVAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAK
                     SLKGVYDRGQPILQLGLVISTGLALALVPMITAARVQDQQKELKRSVLLAIKITLILA
                     GAETIGLIVIMRPLNQMLFQTPDGTFVLQLFMPAVFLSSLIIMLSSILQGFGKITVPA
                     VGVGIGLIVKWVTGGILIPRLATVGASVSTCVGLLVILLICYVSLKQTIRVPFVEKTM
                     LFRLIAALALMAVFPCLFEWLAPLNTRLGSAFQAIVSALVGGGIFLVFSLRYKLLGPK
                     DFVFLPFGSKLLALSKLVARK"
     gene            complement(10720..14259)
                     /gene="mfd"
                     /locus_tag="U0308_001658"
     CDS             complement(10720..14259)
                     /gene="mfd"
                     /locus_tag="U0308_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEM2316624.1"
                     /translation="MKGLQQLIYEQKDIRAVLNALDEKEKAQLVTGLTGSSRALFASV
                     VEGASKRPVVFVTHNLYHAQKLYDDLLSLMDVDRLFLYPADELISSELSISSPELRGQ
                     RVEALDFLLSGKPGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTM
                     GYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRV
                     EEFRLLPATEIILDQSYYPDIVKRLEKKMTHTLNELKENEDKQALVENLEEDLEMLRS
                     GVKPDMFFKYIGLAYPDPASLFDYFPKNTAILLDEFGRILETEESLEREEAEWQTETL
                     SRMETVRDVQVSHSFKKLLEANHSPKIYLSLFQKQMASMRVSKTTNIVYKQMQQFHGQ
                     MNVLKTELESWHKNNYAVVILAPNLERAEKMQQTLTDYDMESAILKKESDVPKYGMVQ
                     FVIGTFQNGFELPLAKVAIISETELFNKKIKKVKKRQKLSNAERIQSYSELKVGDYVV
                     HVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKSPRL
                     NKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQ
                     ETEDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPT
                     TILAQQHFETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDVVVGTHRLLSK
                     DVEYQDLGLLIVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLS
                     VIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAM
                     VPDARVATAHGQMGESELESVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADR
                     MGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMR
                     DLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKKPKEEQKQIVPVEIDIQADA
                     YIPEYYITDGRQKIEMYKRFRNIETLSELEDLQSDMIDRFGEYPEEVEYLFTMTELKV
                     HALEVSIESVKQEQNKITMLFSESGTAGIRGDIVMQIIGEFGRMVGVGMEGTQLKITI
                     NVQNKPLKEWLYQVKSLAEKLRGAMKERASAEN"
     gene            complement(14373..14933)
                     /locus_tag="U0308_001659"
     CDS             complement(14373..14933)
                     /locus_tag="U0308_001659"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEM2316625.1"
                     /translation="MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNG
                     MTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRL
                     RQKGSAGGHNGMKSIIQHVKTQEFNRIRVGVSRPLKGEVIHYVLGDFPKAEQPDIIAA
                     IQKSADAIEDFAQTPFIEVMNKYNQK"
     gene            complement(15040..15624)
                     /locus_tag="U0308_001660"
     CDS             complement(15040..15624)
                     /locus_tag="U0308_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2316626.1"
                     /translation="MLDKSVPHISAIMVNHDATNYPEFHLPEGYSFCFYKDGLEEDWC
                     RLQLETGQVLSMDSIRARFETEFGNEKEKLAKRCVFVEAPNGEIIGTAMLWDGNTFGE
                     MASRIHWVAVLDSHGGKGIAKALLSKILGLNKSSFVYLTTQTGSYQAIYLYQKFGFEK
                     YVGKTPENWKTVNFQEEKEAAWQIIENKIAEHQA"
     gene            complement(15714..16337)
                     /locus_tag="U0308_001661"
     CDS             complement(15714..16337)
                     /locus_tag="U0308_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEM2316627.1"
                     /translation="MATTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVD
                     SLELIKAVRDNGRNAVFSVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVET
                     DVRVVLVGDAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLP
                     ENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEPEAVHGKDEEPVE"
BASE COUNT         4433 a         3554 c         3003 g         5581 t
ORIGIN      
        1 cgctgtgact tttgttaaag tttcatgaga tttttcggtt tttttcttca tttttttcca
       61 tgaaaaaacc agtgtggaaa aagggagtaa accacactgg tcaaaaaggg agtttgggat
      121 tttcattcta aaaaggggaa agaatgaaaa tgttttgctt gttgttagct tatgactata
      181 tattaaccaa gaaaagaaag tttccgctgt gcgtttgatt agaaaatagt aagaaatgca
      241 tttatttctt ttcataaaaa aagaacctag aaaatctagg ctctctgatt attaatcttc
      301 aaaattataa agaggtgtgc ttaggtagcg ttcgccgtta cttgcaacga ttgctagtac
      361 ttttttgcca gcaccaagtt cttttgcaag gtctagagct gctttaacag ttgctccgga
      421 agaaatacct actaagatac cttctttttt cgctacttca cgtgctgttt ctagagcatc
      481 ttcacttgaa acttttagaa tgccgtcata cacttttgta tctaatgtat ccggaacgaa
      541 gcctgcaccg ataccttgga ttttatgagg tgatggagaa ccaccgctaa gtactgggga
      601 ttcttctggt tcaagagcat agattttaac atctgggtag ttctttttaa gtacgtgtcc
      661 tacaccagtt actgttccac ctgttccaac tcccgcgatg aaagcatcta agccatcttt
      721 accgaaagct tcaacgattt ctggtccagt tgtttcttca tggacagctg gatttgctgg
      781 gttgtggaat tgttgtggaa caaaatagtt attttctttt gcaagctctt ccgctttagc
      841 aattgcgcct ttcatgccgt ctggacctgg tgttaaaact aattttgcac cgtaagcttg
      901 aagtaatttg cgacgttcta agctcattgt ttctggcatt acgaaaatcg cttggtagcc
      961 ttttgctgct gctaccattg ctaggccgat accagtattc ccactagttg gctcaatgat
     1021 tgtatcgcct ggttttaatg caccagattt ttcagcgctt tcgatcatcg cgttagcaat
     1081 acggtctttt acgctgccac ctggattttg gaattctaat tttacgtata catccgcgct
     1141 tcctgcttct ggtaaacgat taagtttcac aataggtgtc tttccaatta aatcagtgat
     1201 tgaatttgca attgtcatta ttaaagcact cctatctatt ttaggtcttt catctagttt
     1261 aattaattcc gacctgtttt gtcaagttta acctctttta aaaaggagca accaattagg
     1321 tgctcctttt tctttattta gcttcttcgt atagtttttc taattcttct tctgaaaaat
     1381 cgtaagtgtt acgacaaaaa tgacattctg cttctgcgcc gtgatcctct tctatcatgg
     1441 aacgaatttc ttcttttcca agtgaaatta ttgcactgcc aaagcgttct ttggagcagt
     1501 tacattcaaa ggaaacgggg attttttcta agatttgtag tttatcttcg ccgcctgcaa
     1561 gtttagctaa aatcgattca ggagtttcgc ccgcttcaat cattctagaa actgttggta
     1621 gagccgtcag atttttttcg atttcatcaa tgatttcatc tgtcgcacca gggagtaatt
     1681 gcaacatgaa accgccagct gcttcgattg tatcatctgg gttaacaagt actcctacac
     1741 caacggagga attgatttgt tcagatgttg ctaggtaata cgtaaaatct tcaccaattt
     1801 cacctgaaac aattggcgtt tgtccggtga aattttctcc aaagcctaaa tcttttacaa
     1861 ctgaaagcat tccggatgtt ccaacgccgc ggcggacgtc aagttttcca gcttcattta
     1921 gttcgctgaa gtgaacgtgt ggatttgtta cgtatcctct gatttgacct tgcgcgttac
     1981 tatcagctac gattggaccg attgggccgt cgccttcgat ttttacagtt attttttggt
     2041 cttctttttg cattgctcca aggaaaagtg ttcctgtcat cgttctacca agtgcggcgg
     2101 atgagacgga ccatgtatca tgtcttcttt gtgcttcttt gattgtttcg gttgttactg
     2161 ctgcatatac acgcgccatg ccatcgtagg ctaacgcttt aactaaataa tcactcatta
     2221 tataaaactc cttttatttt tctgtagttg gtttgtttct tctatataga agttctagac
     2281 cttttaatgt taaaaatgga tctaaaatat ctactgcaga agatttttct gttatcatcc
     2341 gagcgagccc gcctgttgca actactactg ggcttgcgtt ggattgtttt ttgatttctg
     2401 cgataatccc ttcgcattgg ccgacgaaac cataaaagat gcccgcttgc atggatgcca
     2461 cggtggattt gccgatgatt tggtttgatt cagcaatatc tacgcgtggt agtttagcag
     2521 cgcggttgta tagagcttcg gtcgaaatca taatccctgg agcgatggcg ccaccttggt
     2581 atacccctga ttcatcgata tagcaaaatg tggtcgcagt gccaaaatcg actacgataa
     2641 ccggtgtccc gtattcttct gatgctgcta cggcgtttac gattcggtca gatccgattt
     2701 cgcgaggatt atcgactttg aggtttaagc cggtttttat tcctggacca acgattaatg
     2761 gtcggatatt aaaatagcgt acgcacattg tttccattgc gtgcataatc ggtggaacga
     2821 cggacgaaat aataattcct tgaatatcag aaggagttaa attcgcataa gaaaaaaagt
     2881 tcaagactgt cattcctaat tcatcggatg tgcggtgacg atctgttgtc atgcgccaat
     2941 gtttcagaag tttttgtttt tcataaactc cgacagtaca gttagtattt ccaacgtcta
     3001 ttacaagtat cataagttta aataccgtcc tttagaagat ttttctaacg tatcataaca
     3061 tgttttatag gaaaatccga ataatatagc ttcaaaaaag agactgggaa agcccagcct
     3121 ctttgatttt attcgtcttt tttatcgttt ggtgtttgct caatgtttgg agcatcttcc
     3181 gaagttactt cttttggttc ttcttttggt tcttcgattt tttcttcttc ttttaactct
     3241 tctttttctt cttcaaaaga tttacctgct acttcttcgt ctttttcgga aggatattct
     3301 gcttctacgt caatcgtatc gatatctgga ggcattacac cgtcatcaaa tagggaacga
     3361 atttggcgag catctaaagt ttctactttt agtaatgttt ccgcgataag tttgtgttgt
     3421 tcttggtgtt ctgtaatgat tgttttagcg cggtcataac agtagcggat taagctctga
     3481 acttctgtat caatttcgta ggcgatttta tcggaatatc ctttgtcgct accgaaatcg
     3541 cggcccataa atacttgacc gttaccagaa gtgaattgaa gtggtccaat cttgtcactc
     3601 ataccccatt cagttaccat gcggcgagca agttcggttg cacgttcaaa gtcattactt
     3661 gcaccagttg ttacttcacc aaaagtaact tcttcggcta cgcgtccacc gagtaaacca
     3721 gtgatacggt ccattaactc agctttcgtc attaggaagc gatcttcttt tggtaacatt
     3781 acggcataac caccagcttg tccacgagga acaatggtaa ctttatgcac aacttccgct
     3841 tcatcaagta ccattccgac gataacgtga ccaccttcat gatatgcgac tgtgcggcgt
     3901 tctttttcag agataactcg atttttctta gctggtccgg caattacgcg gtcactagct
     3961 tcatcgaggt cactcatatc tatttctttc ttatcggaac gtgcggcaac gagtgctgct
     4021 tcattcagta agttttctaa atcggcacca gagaatcccg gtgtacgttg agcgattgct
     4081 tttaaatcaa cacttttagc aagtggtttg ttacgagcat gaacgcgaag tactgcttca
     4141 cggcctttta cgtctggacg atcaaccatg atttggcggt caaaacggcc tggacgaaga
     4201 agtgctgggt caagtacgtc tgcacggtta gttgctgcaa taatgatgat accttcattg
     4261 ccaccgaaac catccatttc aactagtaat tggtttaggg tttgttcacg ttcatcgtga
     4321 ccgccgccca ttcctgctcc acgttgacga cctactgcat caatttcatc aatgaaaatg
     4381 atacatggtg catttttctt cgcattttcg aataaatcac ggacacggct tgcaccgaca
     4441 ccgacaaaca tttctacaaa gtctgaacct gagatagaga agaatggcac gcctgcttca
     4501 ccggcaaccg cacgagctag caaggtttta ccagtacccg gaggacctac taaaaggaca
     4561 ccttttggaa tacgagcgcc gaggtccgca aatttacgcg gatcttttag gaattctact
     4621 acttcaacaa gttcttgttt ttcctcgtct gctccagcta catctgtgaa gcgaactttc
     4681 ttcttgtcgt cgttgtaaag tttggcttta cttttaccaa agctcattac tttaccaccg
     4741 ccgccacctt gagactggct cattaggaag aagaagagga tgaagataat tacaaaaggt
     4801 acaatagaag ttaggaatgt aacccaaccg ctgttttgtt tggcaggtac tattgttgtt
     4861 ttcacgtctt ctttatcaag cgttttttgc aaatcgccta gtgaagtatc gctgtttaaa
     4921 gcgtatgttg tgaaagcagt gctgcttgtt ttgctttgtc caagaccagt ttttttatcg
     4981 tcggaacttt tatcgctaga tttaaattcc ccattgattg tataaacact acggtctggc
     5041 tgtatttcta cggatttaac tttaccatct tctaacttac tcacaaattc tgaatagcta
     5101 atatctttgg ctgcctcttt gtttgagtta aatgaagcaa caatcccgat aataacaagg
     5161 aatattatga cataaaatat cgcatttcta aaaaacctgt tcattcctta cctcctccca
     5221 cgcaagagct tggattctta ctttttctgg acttttaccc ctttaaaagt tgtttttggc
     5281 taatagcaga tttagaaaca attttttctt cccctgatta ttaaaaaaca catccgtttc
     5341 gcttttctct tacgaagtta ttctattatt aatatagatt ttttaatatt tattgatact
     5401 attttcacct tcgaaaacta agactaatga tagcataccg aatctcgatt gcccactatt
     5461 ttgcatgttt gacatcaatt ttttgttttc gttttctgaa aagctatcta ttacatttta
     5521 acaaaatatt gttctgtttg ttaattaatt tcactcgctg tatatttctg gttttaaaat
     5581 accaatatat ggtaaattgc ggtaacgttc tgcataatcc aaaccatatc caacgacgaa
     5641 ttcatttggt acgacaaagc ctacataatc cgcttcaatt tctacatttc gtccagctgg
     5701 tttatcaagt aaagtaacca acttaactga ttttgcttta cggtatttga ttaggtctac
     5761 tagataacta agtgtacgtc cgctatcaat gatatcttca attacaagta catcgcgacc
     5821 ttctactgac gcattaaggt ctttaatgat tttcacttca cccgatgata cagtaccatt
     5881 tccataactg gatacgtcca tgaagtccat ttctaagtat gtgtctactc ttttaagtaa
     5941 atcagtcata aaaggagttg ctccttttaa caccccaact actaatgggt ttcgtccttc
     6001 atattctgtt gttaactcac gacctagttc acgaattttc tcttgtaatt cgtcctccga
     6061 tatcagcact ttctgaatat cattatgcat gctctcgttt cctcctatat ttcgagtgta
     6121 cctaataatg tattgctttt tgctacgact aaattctcgg tcatatgcag acttcttcac
     6181 accgggaacc caaaggattt tcccagtata gtctgttatc acagggagct tgtcgcgttc
     6241 ttgccttggt attttggcat cgatgaaaat atctttaagt ttcttacttc ctgcttgccc
     6301 tttcatcgtc atcctgtcgc cgttcacacg gtttcgaaca atcaaaggaa gtgttatctc
     6361 ttcagcatcc agtagcattc catttagccc atttgtttga acaacggaac tttttaactt
     6421 taaacggata cttgctttat tatctaattc aatgcggtca ttcagttcta gttgatgata
     6481 aaactcggaa ggagcttctc tttctccaaa ttgaaaatga agtttatcgt atgctctgtt
     6541 tgcaacgagt ttatttggta agtcaatcga actagatgga ttgtcgcttt gaatcatttg
     6601 gataatctga tatatgtgat ttaccgttat aaaactggca tcttcattgt acagatatct
     6661 caatagtaaa tgaattgcgc ggcgttgtaa aggattcgct tcatttttaa agttagtaag
     6721 taaaagtgtt gtccgtttgc cgtttttgat gaggtttttc ttcaataaat cactcgcaag
     6781 tgcctccaaa aattggaagt cttcgcttgt ttcttctgaa aatctttcga agtgcgaata
     6841 gacagctgga ttttcttgct ttaaaaacgg taaaagttgc gctctgtaac gatttcttgt
     6901 gtattcttga ctagtatttg attcatcgat ttcgtatgcc aattcgtgtt tctgggcgta
     6961 atcaataatt tctgcttttg taattggtaa aaaaggacgg attgcttgtc ctccttttaa
     7021 ctcgcgtttt ggttggatgc ctgaccagcc gatactagca cttccgcgaa ctagtcgcat
     7081 taagattgtc tcgatttggt catctgcatg gtgtgcgagc gctagtttgt tgatcttttt
     7141 ctcagccatt actttctcaa agaaatcata cctgacaatg cgcgctgttt cctcgatacc
     7201 tttttgcaaa ctctcagctc gactttttac gtctacttct tctatgtaaa aaggaatgcc
     7261 ctggctctcg caaaaagctt cgacgacgtt ttgttcattc gccgcatttt cccttaagtg
     7321 gtgatttata tgtgcgacgg aaattgcttc ttttgggact aaatttgaat tccataaaaa
     7381 atgcagtaac gccaaagaat ccggaccgcc agaaactgcc acaagcaatt tatcatcgga
     7441 tcggattaaa tcatgtttct cgatatactt atgtactcgt ttatcggtgt catccattca
     7501 agaaaacctt ccttcgaaat tcggctctca cattttttat taaaaagtgc accgtattaa
     7561 tgatccaata cggtgcatct actttacaat taattttagc gtattagccg cgttttgctc
     7621 ctcggccgcc acgtttagat tctgtttggc gtttgatagt agtgagtctt tcatcactat
     7681 ctttcaagaa tttagacatt atatcttcaa agctctcggc tggtttcaca tagttcccag
     7741 caggtttttt gctgtatttc ggcttacgat cgtaactttt ctctgggcgg tccggacgat
     7801 ctactgcttt acgaatggac agaccaatct taccatcatc accaatattc attactttaa
     7861 cagtaacttc atcccctaca gttaagatgt cattaatgtc tttaacatag ttatctgcta
     7921 cctcactaat atggactaaa cctgttttgc caccttccag ctccacaaat gctccaaaat
     7981 tagtaatccc agtaactttc ccttgtaact tgttgcctac ttcgatcgac ataaaaaaat
     8041 gcgtcctcct taaaatatca ctctattgct taattatagc tataataaaa agagtgtcaa
     8101 acagtcaaac ttacaaactc caaaaatact caactatatt ttccctttga tttaccatgg
     8161 agaatgacgg ctcggctctg acttactctt tttgtttcga attctcttca ggaatattaa
     8221 aaataatttc tccgtctttg gacaagtaat attcacttct tgctaattta gctatgtaat
     8281 catcattgtg aagtttcttg atttgctcat ttagcgagtc ttgttcgtcc ttcattgcaa
     8341 ccattttctt atccacttgc acttgctttt cttttttctc tttgagtgtc aacacttgtt
     8401 tagtgtatgt gatggttaat aacccaccca ccacagcaaa gataatagcc ataaaagcaa
     8461 gtctacggaa cagggcaatg cggcgacgac tacgagtttt ttccattgtt gcagtatctt
     8521 ttatgtagcg attttctatt ctcgccactt ttgatttggc ttttttcata catcgtccct
     8581 cccatgttct tatttgctaa ttgtctatga ttttcggtag agaaaaaaac gtttcttgct
     8641 taaaatgata tcaataaatc cggcatttgt ctattggaat ccgctaattt tatgatattt
     8701 ttcttgactt tttgacaaaa aattgtttac cgatttttat gaccaataaa aaatcgtttg
     8761 aaatcggcta aatagtgcca tttcaaacga tttttcttta tctactttcg tctgtgcgct
     8821 cttctttaat aatcgtatac atttcagttg cttgttcttt tttcgcattt tcttctaggc
     8881 gttcgatttt tgctgtaacg attttaggac caaagcgaat aactagttca tctccagatt
     8941 ttacattggt acctggtttc gccgtcactc catttaccgc aatgcgacct ttttctgcga
     9001 cttcttttgc tactgtacgt cttttaatta gtcgagatac ttttaaatat ttatctaatc
     9061 gcatggttgt agccatttta ttcacctact ttatattaat tatttccgtg caaccagctt
     9121 actaagcgct agtaatttgg agccaaacgg aaggaaaaca aaatcttttg gaccgagtaa
     9181 tttatatctt agtgaaaaaa caaggaaaat cccgccgcca actaacgcac taacaattgc
     9241 ttggaacgca ctaccgagtc ttgtattgag tggagctaac cattcaaata ggcacgggaa
     9301 tacagccatt aacgctaaag cggcaattag ccggaacaac attgtttttt caacgaaagg
     9361 cacgcggatt gtttgtttta gtgatacgta acaaatgagt agaatcacaa gtaagccaac
     9421 acatgttgaa acggatgcac caactgttgc cagtctcgga ataagaatgc ctcctgttac
     9481 ccattttaca ataagtccaa ttccaacgcc aactgcaggt acagtaattt tcccgaaacc
     9541 ttgtaaaata ctgcttaaca tgatgattag tgagcttagg aaaacagctg gcataaataa
     9601 ttgtaaaacg aatgtaccgt ctggcgtttg gaaaagcatt tggtttaacg gacgcataat
     9661 aactatgagt ccaattgttt ctgcacctgc caaaattaat gtaatcttaa tcgctaataa
     9721 gacggagcgt tttagttctt tttgttgatc ttgaactctt gcggcagtaa tcattgggac
     9781 aagcgcgagc gcaagtccag ttgagatgac taaacctaat tgcaagattg gctgtccgcg
     9841 gtcgtatacc ccttttagcg acttagcgat gaaatccgga atccctgagt cactcattaa
     9901 acgatatact tggaaagaat caactaattg gaataaaatc agcatggagc taactacaca
     9961 aattgcaaca ctttgtcgca agaacgtgcg gccaatacct actttttctt ctttatttgt
    10021 aaatactgct ggttgaatcc cttccccgag ccttaccttt ttattataaa aatgacgcaa
    10081 aatgaaaatc ccggaaaccc caccgaaaaa ggcaccactc atcgccattg aacctgcatc
    10141 atataaatca aaattaaaat gaagtgcaag gccggcacct atcaaaataa tagctactcg
    10201 aataatttgc tccactgttt gcgagattgc ggtcggaatc atgtcacctt ctccttggaa
    10261 aaagccacgc ataaacgcaa gctgtggcat aagtaaaaac acgaaactga tgacccgaat
    10321 taattcagat aatgccgggt ctcccatcat gatagcaatc gggttggcaa ataggaataa
    10381 aaaggcgaaa atcacaatac ttacaattcg gagcatccgt gagactgcgc gcataattat
    10441 ttgttgtcgt cttacatcgc cttctgcctc cgctaacatt ttagaaataa caactgggaa
    10501 tccaccgagt gcgagggtca ttgcaattcc gtatatcgga tatacttgtt ggaaaatata
    10561 aaaccctaca tcccccacca tattttgaaa gggtactcgg taaactgcgc taagtatttt
    10621 agaaataaga gaggccgcgg ttagccaagc cgctcctttc attagtcgct tcatggaacg
    10681 ttctggcact ccgccacctc cttccttctt aataacttat caattttctg cagatgctct
    10741 ttctttcatg gctccgcgaa gtttttcagc caaacttttg acttggtata accattcttt
    10801 taaaggttta ttttggacgt ttatcgtgat ttttagttgt gtaccttcca tacccacacc
    10861 gaccattcgg ccaaattcgc caatgatttg catgacgata tctccgcgaa tgcctgctgt
    10921 tccgctttct gaaaatagca tggtaatttt attttgttct tgtttgacgg actcaatgct
    10981 aacttcgagt gcatggactt tgagttctgt cattgtgaat agatattcta cttcttctgg
    11041 atattcacca aaacggtcaa tcatatcgct ttgtaaatct tcgagttcgc ttaacgtttc
    11101 aatattgcgg aagcgtttgt acatctcgat tttctggcgg ccgtctgtaa tgtaatattc
    11161 cggaatatag gcgtctgctt ggatatcaat ttcaacaggg acaatttgtt tttgttcttc
    11221 ttttggcttt ttcgcctcaa ttgcttcctt aagcatttgc gagtagagat caaacccgac
    11281 tgaatcgata aagccatgtt gttgcgctcc gaggatatta ccggcaccac gaatagataa
    11341 gtcacgcatc gctattttga aacctgaacc taattcagtg aattctttaa tagccgataa
    11401 gcgtttctcc gcttcctcac gcaatatttt atctttttga tacatgaagt aagcgtaggc
    11461 gattctgttc caacgcccta ctcgtccgcg caactgataa agttgtgaaa gacccatccg
    11521 atcagcatct tgaacaaaga gtgtattaac gtttggaatg tctacgccgg tttcaatgat
    11581 ggtcgtcgtt acaagtacat cgaattcccc ttcaaggaaa cttaaaataa cagactctaa
    11641 ttccgattca cccatctgtc cgtgcgcagt ggcaacccta gcatcaggaa ccatcgcaga
    11701 aatttcatct gctttttgcg taatggattc cactcgatta tatagataat aaacttgtcc
    11761 gtcgcgcgct agttcacgtt caattgcttc tcgaactaaa acgttattct gctccgccac
    11821 atatgtttgc actggaaaac ggttcgctgg cggagtttcg ataacagaga ggtcacgaac
    11881 gccgagcatg gacatgtgta aagttcttgg aattggtgtt gcagtaagtg ttagtacgtc
    11941 tattttggaa cgcatttgtt tgattttttc tttatgagtt acgccgaatc gttgttcttc
    12001 atcgacaatt aataagccta aatcttgata ctccacatct tttgataata aacgatgggt
    12061 accaacaaca acgtcgactg tgccgttttt catacccttt aatgtttctg tttgttgttt
    12121 ctttgttcgg aaacggctta aaagtccgat ttctattggg aaaccttgga accgttcttt
    12181 cattgtttca aaatgttgtt gcgctaaaat ggtggtcgga actaagaagg cgacttgctt
    12241 gccatccata attgctttga aagcagctcg taaggccact tcggtctttc cgtaaccaac
    12301 atctccaacc aacagacggt ccatcgggcg cggtcgttcc atatcttttt tgatttctga
    12361 aatcgagcgc agttgatctt cggtttcttg atacgggaaa gcctcttcaa attcgcgctg
    12421 catttcatca tccgcactaa acgcatagcc tttttcagct tcacgttcgg cgtatagttt
    12481 gattaaatcg tctgcgatat cttggacgga agcttgtact ttcttcttca ctcgcttcca
    12541 ttcagcgcca ccaagtttgt ttaatcttgg tgatttacct tctgcaccaa catatttttg
    12601 aactaaatca agttgatcga cggggataaa tagtttatcc tctccttggt aaacaagtag
    12661 caagtaatct ttatgcacac cgttgatatc tagcgtttcc atgccaacat aacgagcgat
    12721 accatggttc acatgaacca cgtagtcacc tacttttaat tcagagtaac tttggattcg
    12781 ttctgcattc gagagctttt ggcgcttctt cacttttttg atttttttat tgaacagttc
    12841 ggtttcactt ataatcgcta ctttagctaa tggaagttca aaaccattct ggaacgttcc
    12901 gatgacaaac tgaaccattc catatttcgg cacatccgat tcttttttca aaatcgcact
    12961 ttccatatcg tagtcagtta aagtttgttg cattttttcg gcgcgctcaa ggtttggggc
    13021 taaaataaca acggcataat tattcttatg ccaactttct agctcggttt tcaacacatt
    13081 catttggcca tgaaattgct gcatttgttt atagacgatg ttagttgttt tcgagacgcg
    13141 catgctcgcc atttgttttt ggaaaaggga taagtatatt ttcggcgagt gatttgcttc
    13201 taatagcttt ttgaaagaat gacttacttg cacgtcgcga accgtttcca ttcgacttaa
    13261 tgtttctgtt tgccactccg cttcttcccg ctccaagctt tcttccgttt ctaaaatccg
    13321 cccaaattca tcaagcaaaa ttgccgtgtt ttttggaaaa taatcaaaaa gcgaggctgg
    13381 gtcaggataa gccagaccga tatatttaaa gaacatgtct ggtttcacgc cagaacgaag
    13441 catttcaaga tcttcttcta aattttcaac tagcgcttgt ttatcctcgt tttctttcaa
    13501 ttcatttaaa gtatgtgtca ttttcttttc taagcgtttg acgatatccg gataatagct
    13561 ttgatctaaa atgatttcag ttgcaggcag taggcggaat tcttccacgc gggttgtcga
    13621 gcgctgcgtt tccacatcaa agaaacgaag agaatctact tcggtgtcaa aaagttctat
    13681 tctaattgga aattcttctg taattggata aatatcaata atcccgccgc gaacactgaa
    13741 ttctcccggc gtatttacca ttccgctcat tgtgtagccc attgtcacta gtttttggcg
    13801 tagtacatct ggatcaattt cttcgccctc tacaatggat atgttgaaat gtttccaaag
    13861 cgatactggt ggaagcattt ttctgagacc agcaactggc acaatgacta tccccggttt
    13921 tccggatagt aagaagtcga gcgcttccac gcgttgacca cgaagttccg ggctagagat
    13981 actcaactca gaagaaatca gttcatctgc tggatataaa aatagtcgat cgacatccat
    14041 taaagaaagt aaatcatcat ataatttttg cgcatggtat aaattgtgcg taacaaatac
    14101 aaccggacgc tttgacgcac cttctaccac gcttgcaaat aacgcacgtg aagaacctgt
    14161 gagccctgtg acaagttgtg ctttttcttt ttcatccagc gcatttaaga ccgctcgaat
    14221 atctttttgt tcatatatta attgttgtaa tcctttcaag ggaaaacagc tcctttttgt
    14281 cagaaaattc attctatgca acgcaagagt aaatcacgcg tccgaagaaa gaccgaaata
    14341 cgtggcaaaa gattgccacg cctcgtcatc gtctattttt gattgtattt gttcataact
    14401 tctataaatg gtgtctgtgc aaagtcttcg atggcgtcag cgcttttttg aatcgctgcg
    14461 ataatatcag gttgttctgc tttaggaaaa tctcccaaga cataatgaat aacttctcct
    14521 tttaaaggac gactaacgcc aacacgaatg cgattaaact cttgtgtttt aacgtgttga
    14581 ataattgatt tcattccatt atgtccgcca gcactacctt tttggcgtaa tctaatcttc
    14641 ccaactggta aatcgagatc atcatacaca atcacgacat cttcaattgg tatgttgtag
    14701 taatccatta gcggacgaat gcattcacct gaagcgttca taaaagtgag tggtttcact
    14761 aaaatcattt tttcaccgcc gacgataatt tcgctagtca taccattaaa ttttgatttc
    14821 ttccaagggg tttgatgacg aaaacttagt tcgtcaacta ccataaaacc gacattatgc
    14881 cgggtacgtt cgtatttttt gcccgggttt ccgagtcctg cgattagttt cataaaagct
    14941 tctccttaca tgaacgaaac cacttcacga atgaactggt ttttgtttcg atgttttttt
    15001 gattataaca tggatttcac ttggttgaaa gttttccaac taggcttggt gttcggcaat
    15061 tttattttcg ataatttgcc aggccgcttc cttttcctct tgaaaattga ctgttttcca
    15121 attttccggc gtttttccga cgtatttttc aaaaccgaat ttctgatata aatagatagc
    15181 ttgataactt ccggtttgcg tagttaaata gacaaaacta cttttattca agccgagaat
    15241 tttggataac aaggctttcg cgataccttt tccaccgtgc gaatcaagca ctgcaaccca
    15301 gtgaatccga ctcgccatct cgccgaatgt atttccatcc caaagcatag ccgttccaat
    15361 aatttcacca tttggcgcct ctacaaagac gcagcgcttg gctaattttt ctttttcatt
    15421 tccgaattcc gtttcaaaac gagcgcgaat actgtccatt gaaagcactt gacccgtttc
    15481 taattgcaat ctacaccagt cttcttccaa accatcttta taaaagcaaa aagaatatcc
    15541 ctcaggtaaa tgaaactccg gataatttgt agcatcgtga ttgaccataa tagcagaaat
    15601 gtgcggtact gacttatcaa gcatataaac gcctccttct cgaaaccatt ataacaaaaa
    15661 aaatggaaga tatcgcaaac aaaagcgaat cttccatcct tatttattca aaattattca
    15721 acaggttctt catctttacc atgtacagct tctggttcag gtgcttccgt agtcgttggt
    15781 tcttcttccg cacgtggagc agatacagtt actactgttt cttcttcctc cgcttgcacg
    15841 acatagtctt tgttttccgg aaggtcgttc gttgttaaaa catcaccgat ttctaatgaa
    15901 gaaatgtcta attcaattgt ttctggtaat ttttctggtg ttgctgaaac ttttacatca
    15961 tggataattt gttgtagtac gccgccagct ttaactcccg gtgcatcccc aactaatacc
    16021 acacgaacat ctgtctcaac ttcttcattc atatcaaccg ctagtaaatc aacgtgtact
    16081 aatacgtctt ttaacggatc tacttgatat tcatgtaata aaacgtttaa tttcttgccg
    16141 tccacagtaa ctgaaaatac ggcgttacga ccattgtcac gaactgcttt gattaattcc
    16201 aaagaatcaa cggaaactgg aacattttcc gatttgtagc cataaataat tccaggtact
    16261 tttccttcac tacgcaatct cgttacttct gaatgttgcg ttgtttctct tttctggacc
    16321 tctaatgttg ttgccataaa aaatcactcc actcattcaa ttttggtaca tctacattat
    16381 atctaccctt tagaaaaata gcaaaacaaa gaaatagcct aattttgatt tgtaaggttt
    16441 ataattctca ataaaaggta aacagaaaat agcggctatt cgctaatgtg gacgcttcca
    16501 aactgtacta tagcgttttc acaaatttat tataacaact tttttaaatt caggacgttc
    16561 aacgcttcac a
//
LOCUS       DASDYK010000051        16301 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.051, whole genome shotgun sequence.
ACCESSION   DASDYK010000051 DASDYK010000000
VERSION     DASDYK010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 16301)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16301)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16301
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.051"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            4..693
                     /locus_tag="U0308_001662"
     CDS             4..693
                     /locus_tag="U0308_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316628.1"
                     /translation="MLVGNNIAKSYPNKLVLQNVDFEAKPGDMIVLTGENGSGKTTLL
                     DMLASLKKPDSGTLELDNEVFTTNDIRQQIAYLNNELYAKKSTTIEDYMKQHGLLFEN
                     MELDKWDRLLAGWRINKRLKLGELSTGMLMKVKIGSVLARKAKLYLYDEPFASIDIMA
                     RSEVMKAIISETNPDAITIISSHHLEGTEKLYSKLWLIKDNTLKTIETETYREETGNA
                     LIDFYKEEMNK"
     gene            690..1394
                     /locus_tag="U0308_001663"
     CDS             690..1394
                     /locus_tag="U0308_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2316629.1"
                     /translation="MTKMITFYLKQISPILLIGLAIILGLNFLGFTMNLLEGTDLLFR
                     AIRGTTVMSLILVLITTWKITKLDTSKENVTLASLSGFSETKKFFGKLFAAYLSAITV
                     ILLQSAFIWYYGFETGRMEAGDALSFVSGTLMMFLFIAMFVCYFVIPVGWLKDHVKAS
                     SLQKAAVILLLFAILIVNLLAEYYLHIYNGPGIISILPNGHFDISLLSIVWNVGLCSV
                     IAGSYIYMKSKKMDTI"
     gene            1409..3409
                     /locus_tag="U0308_001664"
     CDS             1409..3409
                     /locus_tag="U0308_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2316630.1"
                     /translation="MLEIKHLKKSYKLGKKNETPVLKDINVTIQDGEFAAIIGKSGSG
                     KSTLLNIISGLDTDYEGKVLYNGEDLQDIDLDAYHFNHIGFIFQSFHLVNHMSVIENV
                     KVPLYLNPELAESDRNARALDLLKQVGLEDFASKKPTQLSGGQKQRVAIARSLANNPD
                     MIIADEPTGALDSVTSDEIIKLLKDLAAKGTTVIVVTHDLNIADQTDAVLRLADGEVI
                     SFERKKEVVQKVTHKNEKKLRLNWWATAKISFKSFFNRKFRNLLVALGTSIGIIAILL
                     AFGLGNGVNQSLSKIFGTTFSPNQITTYYKEDGGSKSPEPTTPLTSSEIKKIKQLYED
                     ENITEIYERTTVQGIKFEYDGEYLKGISGEMQEANFKPSRYEDLTVKDEYLLSGKMVT
                     SDETGAVIPSSVARAILGKKDSDELTKSDGDKLIGKKITLVYAGRNSDTKNTVKTETI
                     ISGITNPSKEGFARGFDVSTKTMNDFIKTTGIEKPILSVDAFTKTTAEAEEIVEKYED
                     DKDWANYSITNANAFVDTFSQFTDIIVYLIAFIAGLSLAVAGVMIAIVLYIGVVERTR
                     EIGVFRAIGYRKRHIRGLFMMEASYIIILANVLSSLVAMKIAKIASPILETKIGFEDM
                     IHISFWNFLVTLAITITIGFIFSIYPSNKAAKLDAAEALRSE"
     gene            3438..3941
                     /locus_tag="U0308_001665"
     CDS             3438..3941
                     /locus_tag="U0308_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316631.1"
                     /translation="MKKPLKISLIVVGIAVVIFAGVMLSYRFIKSMDVTENAEINKSA
                     TGDHVLLATQGSKFKDSVMDQVKKDMEGKNVHVSIIDTTKLDKVKADDYDKVVLFTTV
                     QSDDIPENVTTFMNDNKDKSIHIAVTADSGRWDDKPKDIDAISEASKAENKQDFVDDL
                     TKAIVAE"
     gene            4084..4284
                     /locus_tag="U0308_001666"
                     /pseudo
     CDS             4084..4284
                     /locus_tag="U0308_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464278.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4380..5216
                     /locus_tag="U0308_001667"
     CDS             4380..5216
                     /locus_tag="U0308_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2316632.1"
                     /translation="MSVLNIEGAKLSYQKVGQGPILIFIPGANGTGDIFLPLAEQLKT
                     SFSVVMVDRRGYGDSELTAAIPERASHAYDDYRVTRDAADIAALAKALSDEPVYILGS
                     SSGSIVAMHVLKNHPEVVKKIAFHEPPINTFLPDSEMWQEANEKIVQTALTKNMAEAM
                     QLFGETLHIAPIDAESMSKPAVTIDEVTKDSTTQQMKYWFTYEIRQYTSSNISLDDFK
                     PYVHQITLLNGTDSKGSFPQDVNAFIAKQLGLTIVDIPGGHLGYIQKPAGFAKVLLSI
                     WG"
     gene            5342..6022
                     /locus_tag="U0308_001668"
     CDS             5342..6022
                     /locus_tag="U0308_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2316633.1"
                     /translation="MNIRTELQNSQLCEGLTEAQLNELMNKITVKEKHYKNNEILFYT
                     DEVTKVYILVKGNAAIAKNTSSGKRILGKNVTEPGELAGEIYYFSHRNPFWDYVIVLE
                     PTTVLEISSIDQETLQTLDLALQNQLLVNLLKSVTRKFEYIGEKVRMVSEDSVRAKIS
                     NYLFGIQDDDGSIELTETREEIADYLDITRPSLSRELGRMQKENIIRIEGSSVIILDA
                     IIFDTFIE"
     gene            6103..6714
                     /locus_tag="U0308_001669"
     CDS             6103..6714
                     /locus_tag="U0308_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEM2316634.1"
                     /translation="MLLTRNEPFTAEKIQAKTDILELVQFERFCRDNALWDEMETCFT
                     KDSNVKISWFQGTGHGFIEASKKMTNPAPHKIYNTQVWINNDRAVAIMQATIQTRTII
                     NGVEMELNSDAKLVTRVERIEGRWYINAFEGVYEKDSLMPIIPSKLADVPAELLANFR
                     KSYACLALSLTLNGYEIDNNLPGIDRPEQVAQFFKEADEWLLQ"
     gene            6829..7650
                     /locus_tag="U0308_001670"
     CDS             6829..7650
                     /locus_tag="U0308_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEM2316635.1"
                     /translation="MEKSKTVQILLVFSVVALILSMVGVVSIWYGQKNHQTNNAKTTA
                     KKETTVTKKQDTFKITALGDSLTYGVGDTEGGGYVRVVENFYKQKEKNVENVNLAISG
                     AKSDQLLKQLDQKEVQNQIKSADVILMTIGGNDLFRGGEALDDFKSNAIKQAEASYTN
                     NLKQIYQTIRKLNPSAPVFHIGLYNPFMSLKNASEMSAVANEWNMQSQNLSQNEKNII
                     YVPTFDLFQQNGDAYLATDKFHPNHAGYQFIGNRVTEVIQTGGGKDDDGASTSSN"
     gene            7622..8527
                     /locus_tag="U0308_001671"
     CDS             7622..8527
                     /locus_tag="U0308_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316636.1"
                     /translation="MTELALQVTNLHKKIRKREIIKGISFEVMPGEVFGFLGPNGAGK
                     TTTIRMIVGLIKPTSGTILIGGKDIRKNFTEAMRGLGSIVENPEFYTFLTGQENLAYF
                     ARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQALLSNPKLLILDEP
                     TNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAIMTDGTIIKTDQV
                     SHLLSSRAQLRWLATPFEQAKAFLESVTEVEVDGEYLVTAVNEHSAEWNEQLVAKGIQ
                     VHEIDKKKPSLEDLFLELTGGHTID"
     gene            8520..9500
                     /locus_tag="U0308_001672"
     CDS             8520..9500
                     /locus_tag="U0308_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2316637.1"
                     /translation="MINLVYNEQLKLWRKKRLIVILALVAIIVAIFTYAQFRQHQEDE
                     KQAGTSDWHVQTQQQIVDLENRLGTGRLPEEYQKYFKVLVGQLQYYLDNDINPNAPGA
                     PTFLKTFVENGISLLFPLFIMVIAADLISAETSAGTMKFLLTRPVKRWRILTSKYISM
                     LLSISAIMVLSAVIAYLISGIVFGYGGWDAPVLTGFGMKDGAVTTTDVYQLPVWQLLL
                     MEFGLAWFVSVVVGVLTMFVSVLVRSTAAVMGIMLASLITGTILTNLVSSWPSAKYLF
                     MVNLQLTNYLNGSSPPVEGMTLSFSMLVLTAWMLVAFILSYFIFTKRDVY"
     gene            9627..10517
                     /locus_tag="U0308_001673"
     CDS             9627..10517
                     /locus_tag="U0308_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2316638.1"
                     /translation="MIKGIHHVSALTKSFSENHHFYSDILGLRLVKNTVNQDNIHMRH
                     LFYGDYTGSPGTLLTFFEVPRIGSSYNERAFFGNITLGIPKGTSSYWKKRLNDFAISF
                     QKEGQTLTLQDPDTMGIILTEIPETISNPIIHTDIPSEKQIVRIIGADYHVPNPAATS
                     QFFTDLFGLESQNGVLVDKDKTSFAKLHATSSDKKSRTGRGTIDHIAYTVETKEAVDE
                     LHDIAVRNDLKIEEFVDREYFKSLYIREPGGLRIEFASAGPGFTIDEPLETMGDNLAL
                     PSFLEEKRTEIETYFGGDLS"
     gene            10514..11473
                     /locus_tag="U0308_001674"
     CDS             10514..11473
                     /locus_tag="U0308_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HEM2316639.1"
                     /translation="MIKDLKGIHHVTAMTSSAEKNYAFFTEVLGMRLVKKTVNQDDIH
                     TYHLFFADDKGSAGTDMTFFDFPNLPKGRHGTDSISRVAFRVPSDAALEYWLDRFEQL
                     EVPHSDIKTLFGKKYLTFQDFDDQQLQLISDENNEGVAAGTPWKNGPVPEKYAIYGLG
                     PVFLTVVSLKNMDAILQTIFGFRKVTEEDGLHLYEVGEGGNGAQVIVEERTDIPAAMQ
                     GYGGVHHVAFRVEDHEELQKWIDRMNTIEAPNSGYVNRFYFESLYVPVSERILFEFAT
                     DGPGFASDEPYETLGEKLALPPFLEPKRAEIEKMVRPINTKRS"
     gene            11480..12088
                     /locus_tag="U0308_001675"
     CDS             11480..12088
                     /locus_tag="U0308_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2316640.1"
                     /translation="MEHIYIPGKNKDLAPLLLLHGTGGDEKSLVEVAEFIAGDAAVLS
                     LRGDIKEGGANRFFKRFHDGSLDLEDLESKTAELITTTRELAEKYQLDFERMIAVGYS
                     NGANIAANALLQAEDSFHKAILFHAMPAGNKQPEFSISHRNVFLSAGLNDPLITAKAS
                     EELVEILEKRGAKVETVWTAAGHSLTMEELEEAKKWYQNNQK"
     gene            12098..12718
                     /locus_tag="U0308_001676"
     CDS             12098..12718
                     /locus_tag="U0308_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEM2316641.1"
                     /translation="MTIFKSADLSQKENYKFLTGSIIPRPIAFVTTLAEDGETVNAAP
                     FSFFNVVSSDPAIVSIAVQRANGEQKDTARNAAFTKELNIHIVSESFVEEMNKTAARL
                     APDVSEIDTTSLHLEKVPGMKTPKISEANIVLTAKLEQIIPIKNDAGEVVSDLILARI
                     LTYDFADEVFDSEHHYILPEKLEPVARLAGNDYTKLGDIFRIERPI"
     gene            13046..14302
                     /gene="hflX"
                     /locus_tag="U0308_001677"
     CDS             13046..14302
                     /gene="hflX"
                     /locus_tag="U0308_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEM2316642.1"
                     /translation="MEKKVLIVGISQKQKDFDYSMEELANLAAANNMEVVGEIRQNID
                     RENRATYVGKGKVDEIKGLAEMQDARLIIFNDELSPSQIRNLEEALELDVMDRTGLIL
                     AIFANRAKTKEAQLQVQIAKLQYELPRIFGQGEDMDQQSGKGGLSNRGSGEKKIETDR
                     RTIKYQIRHLQKELDMLVDDREVRRRKRKKNEIPVVSLVGYTNAGKSTTMNGLVRAYS
                     ETAEKQVFEKDMLFATLETSVREIVLPDNKQFLLTDTVGFVSKLPHQLVKAFRSTLEE
                     ARDADLLIHVVDYSDPHYKTMMKTTEETLKAVGVEDVPVIYAYNKADLIEGEIYPKQT
                     ENTIVFSAREKESLEFLTEVIRKELFASYEKATFLIPFEAGNVVAYLNDHADVLATEY
                     LENGTQIVAEVSPADLQKLAEYQVAE"
     gene            14368..15240
                     /locus_tag="U0308_001678"
     CDS             14368..15240
                     /locus_tag="U0308_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEM2316643.1"
                     /translation="MKKTGWGILGAVAAFTGYAYWSTKHLTVTDYEIVSDKIPAEWDG
                     ATFVQLSDLHSASFGLYNNPLLSIVNELAPDAVFLTGDMIDGDESPYVAMAVVRKLAK
                     EFPVFYVSGNHEGRSAFYEDFKADMEKHHVTVLENERYFLKKDGAAIMVAGVRDPRFV
                     RDDWAEKELPKEVWEEAALKEALDDATANLSPDYFTILLAHRPEFWPLYQAYPIDLVL
                     SGHAHGGQFRLPLTEGLFAPGQGLMPKWTAGIHRAGGKALIVSRGLGNVTKLPRLFND
                     PEIIRMTLRAKGDA"
     gene            15246..16235
                     /gene="lplA2"
                     /locus_tag="U0308_001679"
     CDS             15246..16235
                     /gene="lplA2"
                     /locus_tag="U0308_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate protein ligase LplA2"
                     /protein_id="HEM2316644.1"
                     /translation="MIYLDNEDVLDQAYNFAMEEYALRSLDENETYFMFYRMKPTIIV
                     GKNQNTLEEINHAFVKEHHIDVLRRLSGGGAVYNDEGNISFSMITKDDGNSFQNFAKF
                     TEPVIRALRKLGVNAELSGRNDIEVNGKKISGNAQFATKGRLYSHGTLLFDVDLSMLE
                     KALQVDPEKYLSKGVKSVRSRVTTIREHLAEDIDILTFKQILLESIFETKDIPRYTFT
                     EADKQGIEKLRTERYRNWDWTYGKSPKATIKRKKRFPAGTIEFQVSLEKGQVKEATIY
                     GDFFGTEDVAELAGKIIGCRFERKSIQNAWQEINAKDYFGGIEKEAILDMLFE"
BASE COUNT         5469 a         2826 c         3441 g         4565 t
ORIGIN      
        1 taaatgttag tgggaaataa tatcgctaaa tcctatccaa ataaattagt cttacaaaat
       61 gtagacttcg aagcaaaacc aggcgacatg atcgtgctca ctggtgaaaa tggtagcggg
      121 aaaacgacct tgctagatat gttagcaagc ttgaagaaac cggatagtgg cacattggaa
      181 ttagacaatg aagtatttac tactaatgat atccgccagc aaatcgctta tttaaataat
      241 gaactttacg ctaaaaaaag tactactata gaagattata tgaaacaaca tggtttgctt
      301 tttgaaaata tggagttaga taagtgggac cgattacttg ctggatggcg aattaacaaa
      361 cgactaaaac ttggcgaact atcaacaggt atgttaatga aagtgaaaat tggtagtgtg
      421 ttagcaagaa aagccaaatt gtatctttat gatgaacctt ttgcgagtat cgatattatg
      481 gctcgttcag aagtaatgaa agctattatt agcgaaacaa atccagatgc tatcacgatt
      541 atttcttccc accatttaga aggaaccgaa aaattatata gcaaactgtg gttaattaaa
      601 gataacacgt taaaaactat tgaaacagaa acttatcgcg aggaaacagg caacgcatta
      661 atcgatttct ataaggagga aatgaacaaa tgacaaaaat gattactttt tatttaaaac
      721 aaatcagtcc tattcttttg attggacttg caattatctt ggggctgaac tttctggggt
      781 tcacgatgaa tctgctagag ggaacggatt tgctttttag agcaattcga ggaacgacgg
      841 taatgagcct aattctagtg cttattacga cttggaaaat cacgaaactc gacacatcga
      901 aagaaaatgt aacacttgct tctctttctg gattttcaga aacaaagaaa tttttcggaa
      961 aactatttgc tgcttattta tcagcaatta ctgtaatttt acttcaaagt gcctttattt
     1021 ggtattacgg ttttgagaca ggacgaatgg aagcaggcga tgcgttatcg tttgtttctg
     1081 gaacgttgat gatgttttta tttatcgcta tgtttgtttg ttactttgtt attccggtag
     1141 ggtggttaaa agatcatgtg aaggcgagtt ctcttcaaaa agcggcagtt attctacttc
     1201 tctttgctat cctaattgtc aatttactag ctgaatacta cttgcatatt tataacggcc
     1261 ctggaatcat ttccatttta cctaatggac actttgatat ttcccttcta tctattgttt
     1321 ggaatgtagg cttatgttca gttattgcag gcagttacat ctatatgaaa tctaaaaaaa
     1381 tggatactat ttgaaagtag gagaataaat gttagaaatt aaacacctta aaaaatctta
     1441 taagttagga aagaaaaacg aaacaccagt tttgaaagat attaatgtga ccattcaaga
     1501 cggagaattt gcagcaatta taggaaaaag tggtagtggg aagtctacgt tgctaaatat
     1561 tattagtgga cttgacactg attatgaagg gaaagtttta tacaatgggg aagatttaca
     1621 ggatattgat ttagatgcct atcattttaa tcatatcggc tttatttttc aaagctttca
     1681 tctagtcaat catatgtctg ttattgaaaa tgtaaaagtt ccattatatt tgaatcctga
     1741 attagcagaa agcgatcgaa atgcgagagc gcttgatttg ctgaaacaag tggggctaga
     1801 agactttgct agcaaaaaac caacacaact atctggtgga caaaagcaaa gggtagcgat
     1861 tgcaaggtct ctcgctaata atccagatat gattatagcc gatgaaccaa ctggagcact
     1921 ggatagtgtt acttcagatg aaattattaa actgcttaag gatttggccg caaaagggac
     1981 aaccgtaata gttgtaaccc atgatttaaa cattgcagac caaactgatg cggtattacg
     2041 cctagcagat ggagaagtaa tttcatttga aagaaaaaaa gaagttgtcc aaaaagttac
     2101 ccacaaaaac gaaaaaaagt taagactaaa ctggtgggct actgcaaaaa tttcttttaa
     2161 aagttttttc aatagaaaat tccgaaattt gctcgtagca cttggcacct cgattggaat
     2221 tatcgctatt ttattagcat ttgggcttgg aaatggagta aatcaaagtc tttcaaagat
     2281 ttttgggaca actttttcac ccaatcagat tacgacttat tataaagaag acggtggctc
     2341 gaaatcacct gaacctacca ctccattaac gagtagtgag atcaagaaaa ttaagcaact
     2401 gtatgaagat gaaaatatta cagagatata cgaacgcact actgtccaag gaattaagtt
     2461 tgaatacgat ggcgaatatt taaaaggtat ttctggtgaa atgcaagaag ccaactttaa
     2521 gccatcacgc tatgaagatt taaccgtcaa agatgagtat cttctaagcg ggaaaatggt
     2581 gacaagtgat gaaaccggag cagtcatccc gtcaagtgta gcaagagcta ttcttggaaa
     2641 aaaggattct gatgaattaa caaaaagtga tggtgataaa ctcattggta aaaaaataac
     2701 cttagtttat gccggaagaa acagtgacac aaaaaatacg gttaaaacag aaacaattat
     2761 atccggtatt accaacccat ctaaggaagg ttttgctaga ggatttgatg tttccacaaa
     2821 aacaatgaac gactttatta aaacaactgg tattgaaaaa ccgattttat ctgtagatgc
     2881 attcacaaaa acgacagcag aagcagaaga aatcgtggag aaatatgagg atgacaaaga
     2941 ctgggcgaat tattcgatta ctaacgcgaa tgctttcgta gatacattta gccagtttac
     3001 cgatattatt gtgtacttga ttgcctttat tgcaggtctt tcgcttgcag ttgctggcgt
     3061 gatgattgct atcgtgcttt atatcggtgt ggtggaacga acaagagaaa tcggtgtatt
     3121 ccgagcgatt ggttatcgta aacgccatat tcgcggactt ttcatgatgg aagcaagtta
     3181 tattattatt ttagctaatg tgctatcaag tcttgtcgcc atgaaaattg caaaaatagc
     3241 cagtcccatt ttagaaacga aaattggctt tgaagatatg attcacattt cgttctggaa
     3301 tttccttgtt acactcgcaa taacaattac tattggcttt attttctcga tttatccaag
     3361 taataaagca gcaaaattag atgcagcaga agctttaaga tcagaatgac ccaactaaca
     3421 gaaaagagga atttaacatg aaaaaaccac taaaaatcag cttaatcgtc gtaggaatcg
     3481 ccgtagtcat atttgcagga gtgatgctat cctaccgttt tattaaatca atggacgtta
     3541 cagaaaatgc cgaaataaat aaatcagcta caggagatca tgtattactg gcaactcaag
     3601 gtagtaaatt caaagacagt gtaatggacc aagtgaaaaa agacatggaa ggcaaaaacg
     3661 tacatgtttc gattatcgat acaacaaaat tagacaaagt aaaagcagat gattatgaca
     3721 aagttgttct attcaccaca gtgcagtccg atgatattcc agaaaacgta accactttta
     3781 tgaatgataa taaagataaa agtatccata ttgccgtaac agcagattct ggccgctggg
     3841 atgataaacc gaaagatatt gatgcaattt ccgaagcatc gaaagcagaa aataaacaag
     3901 atttcgtgga cgatttgaca aaagcaattg tggcggaata agactaacag aaacacccat
     3961 cctttggtgg tggctcataa gaaagtatat gaacttattg atagtgacag ctaacaaaca
     4021 gataatgtaa aaagcgtaat atgatggaat tagaattcct cgtattgcgc ttttattttt
     4081 tgaattattt ttccttgtta taattttgcc gcatctcgta tggtttgcga gtttattgag
     4141 aaaatacaat tagttagtca atacattttt attattgtca cttatagtaa tacggcgcca
     4201 atgtgcgcct ctaccgaact atatgaacat ttccttatga gcacctacca tttggtgggt
     4261 gttttttgga aaataaatcc ataatagctt tctcctttcg taaccacggt tacagacgaa
     4321 atcacaaaag ctatctatac taaagttaga ttttagataa attagaggag atggtcataa
     4381 tgagcgtttt aaacattgaa ggagcaaaat tatcgtatca gaaagtcgga caaggtccta
     4441 ttcttatttt tataccggga gcaaatggaa ctggagatat ctttttacca ctggcagagc
     4501 aattgaaaac atctttttct gttgtaatgg tagatcgtcg tgggtatggg gacagtgagt
     4561 taacagcagc tataccggag cgcgctagtc atgcatatga tgattaccga gtgactagag
     4621 atgctgctga tattgctgca ctcgcaaaag cgttaagcga cgagcctgtt tatattttag
     4681 ggtcaagctc tggttcgatt gttgctatgc atgtcttgaa aaatcaccca gaagttgtta
     4741 aaaaaatagc ctttcatgag ccaccaatca atacattctt accagattcg gagatgtggc
     4801 aagaagcgaa tgaaaagatt gtacaaactg ccctaactaa aaatatggct gaagcaatgc
     4861 aactttttgg cgaaacactt catattgccc ccattgacgc agaaagcatg tcgaaaccag
     4921 ccgtaacaat agacgaagtg acaaaagatt caaccacgca acaaatgaaa tactggttca
     4981 cttatgaaat ccgccaatat actagctcta atatatcttt agacgatttc aaaccatatg
     5041 ttcatcagat tacgttactt aatggtaccg attcaaaagg ctcattccca caagatgtta
     5101 atgcctttat agccaaacag ctcggattaa ctatcgtgga tattccaggc ggtcatttag
     5161 gttatattca aaaaccagcc ggatttgcta aagtactttt gtcaatctgg ggataaaaat
     5221 aaaaaattct gctaaaggtt aaatttagca gaattttttt gatgcagtcg taattgctat
     5281 ttaaaagaaa gtggtctatg cttatcgtta aaagtaactt tcattttaga ggagaagcaa
     5341 aatgaacatt cgaactgaat tacaaaatag ccaattatgc gaaggattaa cagaagctca
     5401 attaaacgaa ctgatgaata aaattacggt taaagaaaag cactataaaa ataatgagat
     5461 tttattttat acagacgaag taacgaaagt atatatttta gttaaaggaa atgcggccat
     5521 tgctaaaaat acaagtagcg gtaagcggat tctaggtaaa aatgtcacag aacctggaga
     5581 actggctggg gagatttatt atttctcgca tcgcaatcca ttttgggact atgtaatcgt
     5641 gcttgaaccg acaacagtat tagaaattag cagcatcgac caagaaactc ttcaaacctt
     5701 agatttagct ttacaaaacc aactattagt caatttatta aaaagtgtta ctagaaaatt
     5761 tgaatatata ggtgaaaagg tacgaatggt ttcagaagac tctgttcgtg caaaaataag
     5821 caattattta tttggcatcc aagacgatga tggcagtatc gaattaacag aaacaagaga
     5881 agaaattgcc gactatcttg atattacaag accttcactt tcgagagaac ttggcagaat
     5941 gcaaaaagaa aatattattc gtatcgaagg aagtagcgtt attattttag atgcgattat
     6001 atttgatact tttattgagt aactagtaac cagcgttaca tcttttcgta tgcggtaatg
     6061 gtaagctatt cgtattaaaa gaatgaatac ggaggagatt agatgttatt aactagaaac
     6121 gaacctttta ccgcagaaaa aatacaagca aagacagaca tccttgagct agttcaattt
     6181 gaacgatttt gtcgcgacaa tgcactttgg gatgaaatgg aaacttgctt tacaaaagat
     6241 tcaaacgtaa aaatttcatg gtttcaaggg actggccatg gctttattga agcatcaaag
     6301 aaaatgacca atcctgcgcc acataaaata tacaatacgc aagtttggat taataacgat
     6361 cgagctgtgg caattatgca agccactatc caaacacgca ccatcattaa tggagtagaa
     6421 atggaactca attctgacgc caaattagtc acacgagttg agcgaatcga aggcagatgg
     6481 tatattaatg cgtttgaagg agtttatgag aaagactcgt tgatgccaat cattcccagt
     6541 aaacttgcag atgttcctgc tgagttgtta gctaatttta gaaaaagcta tgcttgccta
     6601 gcactttcat taacattaaa cggttatgag attgataata atcttcccgg cattgatcgc
     6661 ccggagcaag tggctcaatt tttcaaagaa gctgatgagt ggttgctcca ataatttaaa
     6721 aaggatagct agtttttact agctatcctt tttaaatgaa ggagtctcat tttaaaatat
     6781 gctatactta gtgaaatata aacctcatga aacggtaggt ggttgtcagt ggaaaagagt
     6841 aagacggttc aaattctatt agttttttcc gttgttgcgt taattttgag catggttggg
     6901 gtggtatcaa tttggtatgg gcagaaaaat catcaaacga ataatgcgaa aaccaccgcc
     6961 aaaaaagaga cgacagtaac gaaaaaacaa gataccttta aaataaccgc gctcggtgat
     7021 tcgcttacat atggcgttgg cgatacagaa ggcggcgggt atgtccgagt ggtggagaat
     7081 ttctacaaac aaaaagagaa aaatgtcgag aatgtcaatc ttgctattag tggggcgaaa
     7141 tcagaccagc ttctcaaaca attagatcaa aaagaagtgc aaaaccaaat aaaatcagcc
     7201 gatgttattt taatgacgat tggcggaaat gatttgtttc gtggcggaga agcactggat
     7261 gatttcaaaa gcaatgcaat taaacaagcc gaagcaagct atacgaacaa cctgaaacaa
     7321 atttaccaaa cgatacgaaa attaaatcca tccgcgcccg tttttcatat tgggctgtat
     7381 aatccgttta tgtcattaaa aaatgcgagt gaaatgtcgg cagttgcgaa tgagtggaac
     7441 atgcaaagtc aaaatctatc gcaaaacgag aaaaatatca tttatgttcc gacttttgat
     7501 ttatttcagc aaaatgggga tgcatattta gcgactgata aattccatcc aaatcacgcc
     7561 ggatatcagt ttatcggtaa tcgggtgaca gaggttatac aaacaggagg gggaaaagac
     7621 gatgacggag ctagcacttc aagtaactaa tctgcataaa aaaattcgca aacgagaaat
     7681 tatcaaaggg atttcttttg aagtaatgcc cggagaagtt tttggctttc ttggaccgaa
     7741 tggagctggc aaaacaacga cgattcgaat gattgtgggg ctaatcaaac caacatctgg
     7801 aacgatttta atcggtggaa aagatattcg caaaaatttt acagaagcaa tgcgaggtct
     7861 tggctcgatt gtggaaaacc cggaattcta tacattttta acgggacaag aaaatttagc
     7921 gtattttgcc cgaatggatt cgtcgataaa aaaagaacgt attcaagaag taaccgagct
     7981 agttgggcta gaaaagcgga taaatgaccg agtttctacg tattcacttg gtatgcgcca
     8041 gcgtttaggc attgctcaag cgttactttc gaatccgaaa ttattaattc ttgatgaacc
     8101 aacaaacggt ttagatccat ctggaattca cgaaatgcgc gactttatcc gtgctctggc
     8161 tagaaatgaa ggtattagtg tacttgtttc ttcccattta ttaagtgaaa ttgaactttt
     8221 atgtgaccga gtggcgatta tgacagatgg aacgattatt aaaaccgatc aagtttcaca
     8281 tcttcttagt tctcgtgcac aattacgctg gctggcgact ccttttgaac aagccaaagc
     8341 atttttggaa agtgtaactg aagtagaagt ggacggcgaa tatctcgtga ccgcagtgaa
     8401 tgaacatagc gccgaatgga acgaacagtt ggttgcaaaa ggcattcaag tccatgaaat
     8461 tgataagaaa aaaccatctc tcgaagacct atttcttgag ttaacaggag gtcatacgat
     8521 tgattaattt agtctataat gaacaattaa aactttggcg caaaaagcga ctcatcgtta
     8581 ttttggcgct agtggcaatt atcgtagcga ttttcacgta tgcacagttc cgacagcatc
     8641 aagaagatga aaagcaagct gggacaagcg attggcatgt gcaaacccaa caacaaattg
     8701 ttgaccttga aaataggctc ggaacagggc gactgccaga agaatatcaa aaatatttta
     8761 aagtgcttgt cgggcaacta caatattatt tggataatga catcaaccca aatgcacctg
     8821 gagcaccaac tttcctaaaa acgtttgtcg aaaatggtat tagtttattg tttccgcttt
     8881 ttatcatggt tatagcggcc gacttaatta gtgctgaaac aagtgcggga acgatgaaat
     8941 tcctgctgac aaggcctgtg aagcgatggc ggattttgac gagtaaatat atttcaatgt
     9001 tgctttcgat ttccgcgatt atggtattat ccgctgttat tgcctatctg atttctggaa
     9061 ttgtgtttgg ttacggtggc tgggatgcgc cagttctcac cggatttggc atgaaagatg
     9121 gtgctgttac aacaacagac gtgtaccaac tgccggtttg gcaactactg ctcatggagt
     9181 tcggactcgc gtggtttgtc agtgtcgtgg tcggcgtgtt aacgatgttt gtatcggtgc
     9241 tcgtccgctc cacagctgcc gtaatgggaa ttatgcttgc ttcactcatt accggaacca
     9301 ttttaaccaa cctcgtcagc tcttggccga gcgcgaaata tttatttatg gttaatttac
     9361 aactaacgaa ttacttaaac ggctcgagcc cacccgtcga aggcatgaca ttgagtttct
     9421 cgatgctcgt tctgaccgcg tggatgctag tcgcgtttat cttatcctat tttattttca
     9481 ccaaacgaga tgtgtattaa agagcgctta atggcgctct tttttgcggt cattaaaagt
     9541 tacttacttt ttgtgagcat aaaacttttc tttttaatag tttagttata aactatagtt
     9601 agtaatcaag aaggaggtac aaacaaatga ttaaaggcat tcatcacgta tccgcgctaa
     9661 cgaaatcatt tagcgagaac catcattttt attcagacat attagggcta cggctcgtaa
     9721 aaaatacagt aaatcaagac aatattcaca tgcgtcacct attttacgga gactatacag
     9781 gaagcccggg taccttgtta acatttttcg aagtacctcg tatcggctca agctacaacg
     9841 aacgcgcctt tttcggaaac atcacccttg gaataccaaa aggcacaagc tcttactgga
     9901 aaaaaaggct aaacgatttt gcgatatctt tccaaaaaga aggccagact ttaaccttac
     9961 aagatcccga tacaatgggt atcatcctaa cggaaatacc agaaaccatt tctaacccaa
    10021 tcatccacac tgatatcccg tctgaaaagc aaattgttcg gattatcggc gcagactatc
    10081 acgtgccaaa tccggccgcg accagccagt ttttcacgga tttatttggc ttagaaagtc
    10141 agaatggggt attagtagat aaagacaaga cgagttttgc gaaacttcat gccacaagtt
    10201 cagacaaaaa atcgcgaaca ggacgcggga caatcgatca cattgcttat accgttgaaa
    10261 ccaaagaagc cgttgatgaa cttcacgata tagctgttcg aaacgatttg aaaatagaag
    10321 aatttgttga ccgcgagtat tttaaaagtc tatatattcg cgaaccaggt ggcttaagaa
    10381 ttgaatttgc aagtgctggc cccggtttta caattgacga accgcttgaa acaatgggcg
    10441 acaacttagc cttaccaagc tttttagaag aaaaaagaac agaaattgaa acttattttg
    10501 gaggagattt atcatgatta aagatttaaa aggaattcac cacgtaacag caatgacaag
    10561 tagtgcggag aaaaattatg cgttttttac agaagtttta ggaatgcgtt tagtgaaaaa
    10621 aaccgtcaac caagacgata ttcatacgta tcatttgttt ttcgccgatg acaaaggttc
    10681 agcgggaacg gatatgacat tttttgactt tccaaattta ccaaaaggac gtcacggcac
    10741 agacagtatt tctcgcgtag ctttccgagt acctagtgat gcggcgcttg aatactggct
    10801 tgatcgtttt gaacaattag aagttcctca tagtgatatc aaaactctat ttggcaaaaa
    10861 atatctgaca ttccaagatt ttgacgacca acaattacaa ctgatttcag atgaaaataa
    10921 cgaaggggta gcagctggaa ctccatggaa aaacggacca gtcccagaaa aatatgcaat
    10981 ttatggctta ggaccagtct ttttaacggt tgtttcgctc aaaaatatgg atgcgatttt
    11041 gcaaacgatt tttggcttta gaaaagtgac agaagaagac ggacttcatt tatacgaggt
    11101 tggcgaaggt ggtaatgggg cgcaagtgat tgtcgaagaa cgtaccgata ttccagctgc
    11161 aatgcaaggc tacggtggcg ttcaccatgt ggcttttcga gtagaagacc acgaagaatt
    11221 gcaaaaatgg attgaccgca tgaatacaat cgaagcaccc aactctggct atgtaaaccg
    11281 cttctacttt gaatcattgt atgtacccgt ttcagaacga attttgtttg aattcgcgac
    11341 agatggtccg ggctttgcaa gtgatgaacc atacgaaaca ctcggtgaaa aattagcctt
    11401 gcctccattt ttagaaccaa aacgcgcaga aattgaaaaa atggtacgtc cgattaatac
    11461 gaaacggagc tgataaacga tggaacacat ttatattcca gggaaaaata aggatttagc
    11521 cccactatta ctacttcacg ggacaggcgg cgatgaaaag tcgcttgtcg aagtggcgga
    11581 atttatcgca ggtgacgcgg ctgttttatc gttgcgcggt gatattaaag aaggcggagc
    11641 aaatcggttt ttcaaaagat ttcacgatgg cagcttagat ttagaagact tggaaagtaa
    11701 aaccgcagaa ttaatcacta caacacgcga actggctgaa aaatatcaat tggattttga
    11761 acgaatgatt gcagtagggt attcaaatgg cgcaaacatc gcagccaacg cgctactaca
    11821 agcagaagat agtttccata aagcgatttt gtttcatgcg atgccagctg gaaataaaca
    11881 acccgaattt tcgattagcc accgcaacgt atttctgtcc gctggcttaa atgatccact
    11941 tattaccgca aaagcctccg aagaattggt tgaaatcctc gaaaaacggg gcgcgaaagt
    12001 cgaaacagtt tggacagcgg ctgggcattc tcttactatg gaagaacttg aagaagcgaa
    12061 aaaatggtat caaaacaacc agaaatgagg gaagtagatg actattttta aaagtgctga
    12121 tttatctcaa aaagaaaact acaaattttt aacaggaagt attattccac gaccaattgc
    12181 ttttgtaacg acgcttgctg aagacgggga gacggttaac gccgccccgt tcagtttttt
    12241 taatgttgtt tcaagcgatc cagcgatagt ttcgatagct gttcaacgcg cgaatggcga
    12301 gcaaaaagat acagcgagga atgcggcttt tacgaaagaa ttaaatattc atattgttag
    12361 tgagtctttt gtggaagaaa tgaataaaac cgccgctcga ctggcaccag atgtgagcga
    12421 aatcgataca acaagcttgc atttagagaa agttcctgga atgaaaacac cgaagatttc
    12481 cgaggccaat atcgtgctta cagctaaact agaacaaatt attccgatta aaaatgatgc
    12541 tggtgaggtt gtttccgatt taattctggc acgtattttg acatatgatt tcgcagatga
    12601 agtgtttgat tctgagcatc actatatttt gccagaaaag cttgaaccag ttgccagact
    12661 cgctggaaat gactatacaa aacttggcga tattttccgg attgaaaggc caatttaacg
    12721 agaaatagtt gcgaaacaaa agcgaccatg ttaaactagg ggcaacttaa atgaacggag
    12781 ggttgcccat catgcgttat attagactac gtttcccaaa aaatctatgc aactaattta
    12841 atagtgcggg aatatccatg cttatttagt atgggtaacg ggattggtct tgcgtgcatg
    12901 tatggcaccc aaaataaata tgggtagaat gaaggtggaa tgcgcttcat ttgaaagcaa
    12961 gctagtatct ttggatgcta tttttgtgtt ttcttctact caaaaaccct gaccgcgctg
    13021 aatctatttc aggaggtcct tttttatgga gaaaaaagta ttaatcgttg gtataagtca
    13081 gaaacaaaaa gattttgatt attcaatgga agaattagcc aatttagcgg ctgcaaataa
    13141 tatggaagta gtgggcgaaa tacggcaaaa tatcgaccgt gaaaatcgcg ctacttatgt
    13201 tggaaaagga aaagtggatg aaatcaaagg gctggcagaa atgcaagatg ctcgcttgat
    13261 tatttttaac gatgaacttt caccgtcgca aattagaaac ctagaagaag cgttggaact
    13321 ggatgtaatg gacagaacag gcttgatttt agctattttc gcgaaccgag caaaaacaaa
    13381 agaagctcaa ctccaagtcc aaatcgccaa attacaatat gaacttccgc gaatttttgg
    13441 acaaggcgaa gacatggacc aacaaagcgg aaaaggcgga cttagcaacc gtggttcggg
    13501 cgaaaagaaa attgaaaccg atcgccgtac catcaaatac caaatccgcc atttacaaaa
    13561 agagttagac atgctcgtgg atgaccgtga agtacgccgt cgcaaacgaa agaaaaatga
    13621 aattcctgtg gtgtcacttg ttggttatac caatgctgga aaatccacaa cgatgaatgg
    13681 gctagtacgt gcttatagtg aaactgctga aaaacaagtt tttgagaaag acatgctctt
    13741 tgctacgctt gaaacaagtg tacgcgaaat tgttttgcca gataacaagc aatttttact
    13801 cacagataca gttggttttg ttagcaaact tccccatcaa ttagtgaaag cattccgctc
    13861 cacactagaa gaagcacgcg atgcagattt actcattcat gtggtagatt attcggatcc
    13921 gcattataaa acaatgatga agacgacgga agaaacgttg aaagctgttg gtgtggagga
    13981 tgttccagtt atttatgcat acaacaaagc ggatttaata gaaggagaaa tttatcctaa
    14041 gcaaacggaa aatacaattg tcttttccgc gcgtgaaaaa gaaagtttgg aatttctaac
    14101 cgaagtaatt cgtaaagaac tttttgctag ctacgagaaa gcgacttttt taattccgtt
    14161 tgaggcgggg aatgttgtcg cttatttaaa tgatcatgca gatgttttag ctactgaata
    14221 cttggagaat ggcacgcaga ttgtggctga agttagtccg gccgatttac agaagctagc
    14281 agaataccaa gtagctgagt aaagcgagtt ccagctgaat ttgctataat gaaacataca
    14341 gcaaatttag tgaggagatt tctaactatg aaaaaaactg gatggggtat acttggggca
    14401 gttgctgctt tcacaggata tgcatactgg tcaaccaaac atttaactgt aacagattat
    14461 gaaatagtat cagataaaat tccagcagaa tgggacggcg caacttttgt tcagttgtct
    14521 gatctgcata gtgcaagttt tggtttatat aataatcctt tgcttagtat cgtgaatgaa
    14581 ctagcgccgg atgctgtttt tctaacagga gatatgattg atggagatga gtcgccatat
    14641 gtagcgatgg cagttgtgcg caaattggct aaagaattcc cggtttttta tgtgagcgga
    14701 aatcatgagg gtcgaagcgc attttatgaa gattttaaag cagacatgga gaaacatcac
    14761 gttactgtcc ttgaaaatga acgctatttt ctaaaaaaag atggcgccgc aatcatggta
    14821 gcaggcgtcc gggatcctcg ttttgtaaga gatgactggg cagaaaaaga actaccaaaa
    14881 gaagtatggg aagaagcggc attaaaagaa gctttagacg atgcgacagc taatttatca
    14941 ccggattact ttacgatatt actggcgcat cgtccggagt tttggccact ataccaagcc
    15001 tatccaattg atttagtatt atctggacat gcgcacggcg gtcaatttag actaccttta
    15061 acagaaggcc ttttcgcacc gggacaaggt ctcatgccga aatggacagc agggattcac
    15121 cgggctggcg gtaaagcgct tattgtgagc cgcggcttag gaaatgtcac gaaactaccg
    15181 cgcttattta atgacccaga aatcattcga atgacactta gagcaaaagg ggatgcttag
    15241 gaaaagtgat ttatttagat aatgaagatg tactcgatca agcgtacaac tttgcgatgg
    15301 aagaatatgc gcttcgttct ttagatgaaa atgaaacgta ttttatgttt taccggatga
    15361 agccgacgat tattgttggt aaaaatcaaa acacgctgga agaaatcaac catgcttttg
    15421 tcaaagaaca tcatatcgac gttctccgcc gtttatctgg tgggggagct gtctataacg
    15481 acgaaggcaa tattagcttt agcatgatca caaaagatga tgggaatagt tttcaaaatt
    15541 tcgcgaagtt cacagaacca gttattcgag cgctccgcaa gcttggtgta aatgctgaac
    15601 tgagtggtcg aaatgatatt gaagtgaatg gcaaaaagat aagtggcaat gcgcaatttg
    15661 caacaaaagg tcgactatat agccatggga ctttactttt cgatgtcgat ttatccatgc
    15721 tcgaaaaagc attacaagtg gatccagaga aatacttatc caagggtgtt aaatctgtgc
    15781 gcagtcgtgt aacaacaatt cgcgaacatt tagcggaaga tatcgatatt ctaaccttta
    15841 aacaaattct actggaatct atttttgaaa cgaaagatat cccacgttat acttttacgg
    15901 aagctgacaa gcaaggaatc gaaaaattac gcacagaacg ttaccggaat tgggactgga
    15961 cgtatggtaa atcaccaaaa gccactataa aacgcaaaaa aagatttcca gctggaacta
    16021 ttgaattcca agtttcacta gaaaaaggtc aagtaaaaga agcgaccatt tatggggact
    16081 tttttggtac agaggatgtg gctgaattag ctgggaaaat aatcggctgc cgttttgaac
    16141 gtaaatctat tcaaaatgct tggcaagaaa taaatgcgaa agactatttt ggtggaattg
    16201 aaaaagaagc aattttagat atgttatttg aataaagttt aaaactctga gatatagatt
    16261 ctcagagttt ttttaatgcc taaagaaagc gatttcaatt t
//
LOCUS       DASDYK010000052        16216 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.052, whole genome shotgun sequence.
ACCESSION   DASDYK010000052 DASDYK010000000
VERSION     DASDYK010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 16216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16216
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.052"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            262..546
                     /locus_tag="U0308_001680"
     CDS             262..546
                     /locus_tag="U0308_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3130 domain-containing protein"
                     /protein_id="HEM2316645.1"
                     /translation="MREIKVNEVTFQQHATKLASKSSGSYLPLKNGNMAYSRANSIDQ
                     LRSALIDLVGVVEDFQQVTKQDASRIKKMGIAYAKQDQLMGQKMNQLEVR"
     gene            547..915
                     /locus_tag="U0308_001681"
     CDS             547..915
                     /locus_tag="U0308_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P"
                     /protein_id="HEM2316646.1"
                     /translation="MDSAHSKLEQQLQQIKKAKITAETNVDQTRRKQNEQDWLEEDSN
                     QLTHEKLALLDFLRSGWQGEAASGFHRYLEEQQQEEFQAWRKDLQDKRTYLDTELQEN
                     KARLHTLETKQATLQKEWSQ"
     gene            912..2369
                     /locus_tag="U0308_001682"
     CDS             912..2369
                     /locus_tag="U0308_001682"
                     /inference="COORDINATES: protein motif:HMM:NF025768.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316647.1"
                     /translation="MSRIDIAELNDFLYGLRSSNAEAKAMIRKIKEAAMDYAQDNSLK
                     GEAVSTSKRYFTSTYTSICQSIIEALDESEERLAQYIREFGSQVDSSPSARIDAEILQ
                     EAMAKVSQLQRKEEDLHRQLTAPNTKPDMQQVYAVKARSVHTQLLKAIEQENILEKYL
                     AFEQSHGHFFSALDELIRSTGRAVQELLHHVTFNDKTGTYSVPKSATNSLLLMKKALD
                     NARKENNNDPFPDGFEDYTVLAFTYVNGQGKTVTMWLLEKDGKRVENKELQDFLDKHG
                     QELPGISYTEISGEELERRVNDSWKDGVNYLTGQKVSGFTGGVLSSSAYVASMKDWFD
                     DAGLTDMALGLGFGIAAARNKVVIPEKPPITVPKNYSQIRTYWKNEVVFKGTKVYQKD
                     NIIDINKVDVKGRTNLQRMEKGLAPLGSDGNPINLHHMTQREISSIAEVEQSFHQINS
                     KTIHINPNSIPTGIDRKTFNKWRSDYWKERAKEFK"
     gene            2383..2856
                     /locus_tag="U0308_001683"
     CDS             2383..2856
                     /locus_tag="U0308_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEM2316648.1"
                     /translation="MSIEKYNQAKHVIEENDYLVDDFGGASDTIIEKAQVVLNVNFPE
                     DYKAFLADFGALTFGSIEIYGVFKEDFKNSGVPDTVWSTMNERKLVDMPKHLTILYNT
                     GMGELYCLNFADLNSHNEPKITSYYPGFPEKSQQNEVLYDNFGEFLLDMVQEETE"
     gene            3002..3292
                     /locus_tag="U0308_001684"
     CDS             3002..3292
                     /locus_tag="U0308_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014092303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YolD-like family protein"
                     /protein_id="HEM2316649.1"
                     /translation="MFLLFLEVLAMEMMLIGKKYYERVTQPIVTKERWEQYLKLIHDS
                     MDNDYSLRFTTYSGGYEHHVSGKCYLFNESLKTILVSGIIVRDTEIISIERL"
     gene            3279..3498
                     /locus_tag="U0308_001685"
                     /pseudo
     CDS             3279..3498
                     /locus_tag="U0308_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728161.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3633..4946
                     /locus_tag="U0308_001686"
     CDS             3633..4946
                     /locus_tag="U0308_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011011047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HEM2316650.1"
                     /translation="MVQVEDYSHAPRRDILCVDVKSFFASVECVKRGLDPLKAKLVVM
                     SNADRAGGLVLAASPAMKKIHRIKTGSRMYELPTWDKEIIIAPPRMKLYLKVNAMIQD
                     IFLRYVPREFFLAYSIDEAFLDVTGSHRLFGSTQEIAEKIQADILRELRLFVTVGIGD
                     NLLLSKLALDNAAKHQDDGIATWRYEDVPNTIWKIRSLEDMWGIGHRTAENLKRLGIF
                     SVYALSQAPPPLLKSRLGVIGEQLYYHSHGIDYSKINEKYVPVSKSYGKSQILERDYH
                     DPFEVVIVIQEMAEEIAMRLRKQHVNTSVVHIGIRYSKFSVKSGFRHQMKVDATSSNK
                     EIVGHFLTLFWQYYENEAVRQVELSCGGITRKAGLQLNLFENPERTINQEQLDTTIDK
                     IRQRYGFRSMMHASSLLTGATGLKRSDIYSTLSRDQDIQYTYIFL"
     gene            5007..6107
                     /locus_tag="U0308_001687"
     CDS             5007..6107
                     /locus_tag="U0308_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009932612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEM2316651.1"
                     /translation="MRVQEVILNNGGRRYLVLDDQGKPIQPVLQYMKYLDNTQKSPNT
                     QRTYCYALRDYFVFLSLTETSYELANIKTIANFLSWLVNPTLIERVQHLIPPTLKSEK
                     TVNLKVTAVLSFYKFLYQFEHIEYDVAQRAYVDVKGIKQYKGFLHHITKNKRVSESIL
                     KLKEPKSRVETIPDFTLQAALGATTNVRDFFLLRLLYETGLRIGEILSLHKEDILFDL
                     HQGHRVRLVYRKEQPNDSRQKTGLREVHISANLIDLFDDYMYSILDFDRSDSLFVKVK
                     GKSQGLPLNYQDVMATFKRIEGKIEYHLHPHLYRHTHATKYYEQTKDIKIVQERLGHK
                     HIQTTMNLYLHPTDKEIRAQWEKASPAFRMEE"
     gene            6107..8191
                     /locus_tag="U0308_001688"
     CDS             6107..8191
                     /locus_tag="U0308_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEM2316652.1"
                     /translation="MEAHFTKSYPLKEYEEKLRAILSTYTRKEILADGSVQETVIEDD
                     YLLVNDIWKLDFFVNIPQFRERLTEYRENPVNHIFIITFNSVHPIINLELKCLYKLKI
                     FNDEWTAYSSFQKHTHRYRVINFMQLFYPESSSLKELDIDKAEEQYIAWLRETGIEVT
                     EEKKFRHGRPVEIRKVRTAAFLRSAYNSIMHYLDDRPLWVRDVWRLKDFQDSFDFEYH
                     KSSPQGFVRFDSIENNELKQMAKDYIKDRLLGKRHMSWHSAQAYSRILSRFFNIISPT
                     GTEKKAIRNLERKDILAFIEWTRCYYAENNRKGLENHLNRCMGVLQKFLEELQLLEHK
                     EAPRKSIRQLINPGDFPKYTQHRQVNSIPDSVLEQLFSNLNYLHPEVIPIVWITFKTG
                     LRISDVLTLTNKCLITVNESPYLQLDISKTKVHNHRIPIDTHIADIITFLAKRCELET
                     NMDNNPKRYLFPRLSGTRKGRPFTQGFVREELNTLAIKQNIAGEDGEIYHFRMHEFRH
                     TYAVKLLNNGADILTVQELLAHASPEMTMVYARYSDDNKRKEFEKVLASGTFEFSQNG
                     LLQKIEPDQLNKENLDSLWQNHKLNAIDNPYGTCMARLNGKCPFINEPPCLSCNNGNP
                     CKDLAIGLSDLDNEKYQLHIKTMTKTIELLKSNGRMDLVEKNEHLLEKYTDIERKITQ
                     GSIIYGRSNRTD"
     gene            8201..8569
                     /locus_tag="U0308_001689"
     CDS             8201..8569
                     /locus_tag="U0308_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEM2316653.1"
                     /translation="MTFDQRKHLKMLHKKRRAETLEKVEQAIYYLEATKQPINFSRIA
                     KQSGVGKSTLYSIPEVKDRIIIFREVSLGKSYTQKVKKEQDTSVIQSLKRKIQTLETE
                     NKELKLKIKHIYGQVFENTD"
     gene            complement(8614..8910)
                     /locus_tag="U0308_001690"
     CDS             complement(8614..8910)
                     /locus_tag="U0308_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316654.1"
                     /translation="MTLNVEGAEFDYHTENSEKLTKDFLNFVLIDVPFFALQDELLYL
                     MNKRNITRFRIPSYMTVDSKDHIFYFQLRTVEGNDLLRIYRYLGMDLEKKGLNL"
     gene            complement(8907..9311)
                     /locus_tag="U0308_001691"
     CDS             complement(8907..9311)
                     /locus_tag="U0308_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316655.1"
                     /translation="MGESFMSYHPDPLIRDYDDRGMAKWMGFYLSEHTAEMDIEKKGR
                     NTFWSRKPKMSETEISEMLESSYTTRDVVEIQLSELNTEGNAYADIIGVVEGFRDTSI
                     FVSHPDTGIQVIPSNSINHIRMINPNKWSDLS"
     gene            complement(9328..9930)
                     /locus_tag="U0308_001692"
     CDS             complement(9328..9930)
                     /locus_tag="U0308_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316656.1"
                     /translation="MNELLFIKENFNVVSISFMRNGEIQKKLYDWYLPYDYLGKIHLH
                     TKATITINGWKKKVFIANLSYHPKAKMLYKPFPLVPSQQPSWQIQLICQLMNYYGIKY
                     DRERMFKGLTTIENRPLRVDVAFQKSNQWHIIEYHGTHHYFKRGCSTKRFQNILRNME
                     IKRQWCRKNNVRYLEIPFFRQNDIQEMVETFLETPFPEEV"
     gene            complement(9964..11304)
                     /locus_tag="U0308_001693"
     CDS             complement(9964..11304)
                     /locus_tag="U0308_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014930231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HEM2316657.1"
                     /translation="MNFNYDLEPTGDYAFIDMKSFYASCELVARGRHLLKDLLVVMSQ
                     ADNTSGLILASSPMAKKAFGISNVTRSWELPTVEENPMMKKLIVAPPRMRYYIVENLK
                     IQKIVRKYAADEDIMWYSIDEGVVELTHSLNYFVPDKSLTRKEKLNIVSQMIQKDILR
                     ETGIYSTVGMSNSNPLLAKLALDNEAKSTVNMRASWNYSDVETKVWAMPEISDFWGIG
                     HRMKQNLYNMGVSTIYDLAHATPYRLKEKFGVIGLQLYHHANGIDRTKIQERYVPKSE
                     NLGNSQILPRYYKGDEMPLVIREMAEQVAIRLRRRQAKTSTVNLSIGYSKDELEKGFS
                     RQLKITPTDNTDKLAGHLLYLFNKFYTGCLVRNIGVSYSGLLYHAGSQLNLFEEPEEQ
                     IKNEKLDQIMDQIREKYGFVSIVRASSTLEHARSLSQANLVGGHAGGAGGLDGL"
     gene            complement(11468..11875)
                     /gene="arsC"
                     /locus_tag="U0308_001694"
     CDS             complement(11468..11875)
                     /gene="arsC"
                     /locus_tag="U0308_001694"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (thioredoxin)"
                     /protein_id="HEM2316658.1"
                     /translation="MKKIYFLCTGNSCRSQMAEGYAHKLLPKSQFEIRSAGIETHGLN
                     PKAVKVMAEDGIDISEQTSDLLDMSYFNKADLIVTLCGDAKDKCPVIPKGKEHFHWNL
                     SDPAKASGSEEEILAQFRKTRDLIKRNVLAIKN"
     gene            complement(11872..12957)
                     /gene="arsB"
                     /locus_tag="U0308_001695"
     CDS             complement(11872..12957)
                     /gene="arsB"
                     /locus_tag="U0308_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACR3 family arsenite efflux transporter"
                     /protein_id="HEM2316659.1"
                     /translation="MENTEKQGLGVFEKYLTLWVVICMALGISIGKFLPVIPATLSQF
                     EYYNVSIPTAILIWLMIFPMMLKIDFGSIVNVSKKPKGLIVTCVTNWLIKPFTMYAIA
                     AFFFYVVFKSWIPLDLAKEYVAGAVILGAAPCTAMVFVWSHLTKGDAAYTLVQVAVND
                     LIILILFAPIVAFLLGVDNVVVPMATLLLSTVLFVVVPLFLGFLTRSLIIKRKGLAYF
                     ETVFLKKFDSVTIIGLLLTLIIIFSFQGQKILANPLHILLIAIPLTIQTLLIFSIAYG
                     WARLWKLPHSIASPAGMIGASNFFELAVAVAISLFGLQSGATLATVVGVLVEVPVMLL
                     LVKIANNTKHWFPNDTEQTARLRGENI"
     gene            complement(13023..14747)
                     /gene="arsA"
                     /locus_tag="U0308_001696"
     CDS             complement(13023..14747)
                     /gene="arsA"
                     /locus_tag="U0308_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenical pump-driving ATPase"
                     /protein_id="HEM2316660.1"
                     /translation="MIQYLPERMGLTKYLFFTGKGGVGKTTTACATATSLAQDNKKVM
                     LVSTDPASNLQDVFQTTLTNKPTPIEGIDNLQVANFDPITAAAEYKESIVGPYRGILP
                     DSALANMEEQLSGSCTVEIAAFNEFANFLTDPEVADQFDYVIFDTAPTGHTLRMLQLP
                     SAWNNYLDENTTGVSCLGQLSGLGDKKDMYEKAVETLTDAEQTTLILVTRPQKAPLIE
                     AERASEELRKLGIQNQKLVVNGLLEVHDDEISQLIYQEQTHDLENMPEPLKDFDTFYI
                     PLRPYNVTGIDKLQILLSDQQPALEEQEKEVTDFPNLDTVVKEFIRSNKKIIFTMGKG
                     GVGKTTVAIKIAKKLAQEGKKVHLATTDPADHLNMFISDDLPISISHIDEEKELADYK
                     EEVLSKARATMNDDDVAYVEEDLRSPCTQEIAVFRAFAEIVDKSDDEIVVIDTAPTGH
                     TLLLLDSTQSYAREVERSSGEVPVSIQKLLPRLQNSDDTEVLMVTLPETTPVYESMRL
                     DEDLDRAKISHTWWLVNQSMYAADTQNDVLKARSFNELEWIEKVAELSNGKFAVEEWQ
                     PDFSPVGV"
     gene            complement(14793..15161)
                     /gene="arsD"
                     /locus_tag="U0308_001697"
     CDS             complement(14793..15161)
                     /gene="arsD"
                     /locus_tag="U0308_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite efflux transporter metallochaperone
                     ArsD"
                     /protein_id="HEM2316661.1"
                     /translation="MMKKLELFEPAMCCSTGVCGPSVDEELLMVTSVFETFEGLDSIE
                     ASRHNLTSDPDAFVNHPTILKLLQEKGNDILPVTLLDGEVVKEAAYPTLEEFGKYAEV
                     QFVTQAANNSGGCCGGEGCC"
     gene            complement(15136..15483)
                     /locus_tag="U0308_001698"
     CDS             complement(15136..15483)
                     /locus_tag="U0308_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2316662.1"
                     /translation="MNYDEMSVMLKALADPKRLKIIDMLSCGSLCACDILAHFDFTQP
                     TLSHHMKVLEKAGVVLVTKEGQWHHYQLTESFVDKFMGSMMHLFSDEDECVCHNKNCS
                     CKGEKNDEKIGTI"
     gene            complement(15791..16126)
                     /locus_tag="U0308_001699"
     CDS             complement(15791..16126)
                     /locus_tag="U0308_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316663.1"
                     /translation="MTTNKGRGLLNTAKRIPGNFQPSQAYNEKENSTKEKEISDKKAE
                     AEKIKNQKFKNQEGTIKTSIQTKEELQALKNITKTKFDYEIIDLLIDTYVNNELTPEQ
                     RRKFKAMTE"
BASE COUNT         5333 a         2995 c         3046 g         4842 t
ORIGIN      
        1 tttatattga gtaaggaaag taaagttaat tggagaagta gaaaacagat agcaggcgcg
       61 aaagagatta tataatcgaa ctacagtttt catactgaga tagtatgcga cacgaaatgt
      121 taatttattc acttaaatat cctctatagt actatttcct actaaataga ttcacaaaac
      181 gctcacaaaa gccatgtgct accgatgtta taatgggaga gtatgaaact aaatcctatt
      241 acacagagag gaagcaccta gatgagagaa ataaaagtca acgaagtaac cttccaacaa
      301 catgcaacta aattggcaag taaaagttcg ggaagttatt tgccattaaa aaacgggaac
      361 atggcgtatt ccagagctaa ttcgattgat caattgcgat cggcattgat tgatttggta
      421 ggcgtagtgg aagattttca acaagtgacc aagcaagatg ccagccgtat aaagaaaatg
      481 ggtattgcct atgctaaaca agaccaattg atgggacaaa aaatgaatca gttggaggtg
      541 cgttaaatgg atagcgcaca cagcaagcta gaacaacaac tccaacaaat caaaaaagca
      601 aagataacgg cagaaacaaa tgtggatcaa acgagaagaa aacaaaatga acaagattgg
      661 ctagaagaag acagtaacca attaacacac gaaaaactag ctttactaga ctttttacgc
      721 agtggctggc aaggagaagc agccagtggt tttcatcgtt atttagaaga gcagcagcag
      781 gaagagtttc aagcttggag gaaggatctc caggataaaa gaacctattt agacacggaa
      841 ttacaagaaa ataaggccag gctccacaca ctagaaacaa aacaagccac cttgcaaaag
      901 gagtggagcc aatgagccgg atagatattg cggaattgaa tgactttctc tacggtttgc
      961 gaagtagtaa tgccgaagcc aaagcgatga ttagaaagat taaagaagca gcgatggatt
     1021 atgcccagga caatagttta aaaggggaag cagttagtac ctccaaacgg tattttacga
     1081 gtacctatac aagtatttgc cagagcatca tcgaagcact ggatgaaagt gaagagcgac
     1141 tagcacaata tattcgcgag tttgggagcc aagtggatag ttcgccttct gccagaattg
     1201 atgcagaaat cttacaagaa gcgatggcca aagtcagcca gttacagcga aaagaagaag
     1261 atttacaccg acaattgacc gcaccgaaca ccaagccgga tatgcaacaa gtctatgcag
     1321 taaaagcaag aagtgtccac acgcaattac tgaaagccat cgaacaagag aacatcctag
     1381 aaaaatattt ggctttcgaa caaagccacg gccatttttt tagtgcatta gatgaactta
     1441 ttcgatccac cggacgtgcg gtacaagagt tgttacatca tgtcactttt aatgataaaa
     1501 caggtaccta ctccgtccca aaaagtgcga caaatagctt gttgcttatg aaaaaagcac
     1561 tggataacgc acgaaaagaa aacaacaatg atccatttcc ggatggtttt gaggattaca
     1621 ccgtgttagc ctttacatat gtgaatggcc aaggtaaaac ggttacgatg tggctacttg
     1681 aaaaagatgg aaaacgggta gagaacaagg aattacaaga cttcttagac aaacatggcc
     1741 aggaattacc tggtatttct tacacagaaa tttctgggga agaactcgaa cggagagtaa
     1801 atgacagttg gaaagatgga gttaactatt taactggaca aaaagtttct ggatttaccg
     1861 gtggtgtatt aagttcctcc gcctatgtag ctagcatgaa ggattggttt gatgatgcag
     1921 ggttaacgga catggcatta ggcttagggt ttggaattgc agcagctaga aataaagtag
     1981 ttatacctga aaaacctcct attactgtcc ctaaaaacta ctcgcaaatt aggacatact
     2041 ggaaaaatga ggtagttttt aaaggaacga aagtttatca aaaagataat ataattgata
     2101 ttaacaaggt cgatgttaag ggacgtacta atctccagag aatggagaaa ggtttagctc
     2161 cactcggatc ggacggaaat cctataaatt tgcatcatat gacacagaga gagataagct
     2221 ccattgctga agtagagcag tcttttcacc aaattaattc taaaacaatt catataaacc
     2281 ctaattctat tccaacggga atagatagga aaacttttaa taaatggcgt tctgactatt
     2341 ggaaagagag agcaaaagaa tttaagtaaa ggagattttg taatgagtat cgaaaaatac
     2401 aatcaagcaa aacatgtaat agaagaaaat gattatttgg tagatgattt tggcggagct
     2461 tcagatacta ttatagaaaa agcacaagtg gtcttaaatg tgaattttcc agaagactat
     2521 aaagcatttt tagctgattt tggcgcatta acatttggct ccattgaaat ttatggagtt
     2581 tttaaagagg attttaaaaa ctctggggtt cctgatactg tttggagtac tatgaatgag
     2641 agaaaattag tagatatgcc taaacacctc actattttgt acaacacggg aatgggagaa
     2701 ctatattgcc tgaattttgc tgatttaaac agtcacaatg aacctaaaat tacttcatat
     2761 tatcctggct ttcctgaaaa atcgcaacaa aatgaagttt tgtatgataa ttttggagaa
     2821 tttctcttag atatggtaca ggaagaaaca gagtaaaatg gttgcgagtt aacgaatatt
     2881 atagacattc aagtcatgaa aaatagctca caaatagtaa aaattaacct ttaattataa
     2941 aaaatgataa aaaagacaca ttgtaaataa gaacatatgt ttgtataatg tatacaaaca
     3001 tatgttctta ttatttttgg aggttttggc catggaaatg atgttaattg ggaaaaagta
     3061 ttatgagaga gtcactcaac ctattgtcac taaagaacgc tgggagcaat acttgaagtt
     3121 aatacatgac tctatggata atgactattc tctgcggttc actacttaca gtggtggtta
     3181 tgaacatcat gtttcaggca aatgctattt atttaatgaa tcgttgaaga ctattcttgt
     3241 atccggaatt attgttcgag atacagaaat aatttcaatt gaaaggttgt gattttgatg
     3301 acctatcgag atcgaggaat aaaaaaatgg caaggatttt tcttgagtga acataatgaa
     3361 caaatggatc agcaacaagc atcaaccagg ttaaaatggc gagaagctat gtcgtcagaa
     3421 tgcattgaga gcgtgttaag tgctgctatc actcaccagt cttcattagt gatacaaaaa
     3481 aagcccttaa atgcggatgc ttttccggaa ccggatataa taggcagaat ttctggtgta
     3541 gatggtgaaa ctatttttat tcaatcaact gccggaatta tttccctttc tttctccagt
     3601 atcttaaata ttgaagaacg gaaattagaa aaatggtaca agtagaagat tattctcatg
     3661 caccacgaag agatatttta tgtgtcgatg taaaatcatt ctttgccagt gtcgaatgcg
     3721 tgaaacgcgg attagatcct ttgaaagcga aattagttgt aatgagtaat gcagatcgcg
     3781 ccggaggttt agtgcttgca gcaagccctg caatgaagaa aatccaccga atcaaaacag
     3841 gctcaagaat gtatgaactt cccacctggg acaaagaaat catcattgct cccccacgca
     3901 tgaaattata tttaaaagtg aatgcgatga tccaggatat atttttacgc tatgtcccca
     3961 gagagttttt tctcgcctac tcaatagatg aggcattttt agatgtcaca ggttctcaca
     4021 ggttgtttgg gtcgacacaa gaaattgcgg agaaaattca agcagatatt ttaagagaat
     4081 tacgcctttt tgtgacagtc ggaattggtg ataatttatt gttatctaag ctggcattag
     4141 ataatgcagc gaaacatcag gatgatggga ttgctacctg gagatatgaa gatgtcccga
     4201 acactatttg gaaaattaga agtttagaag atatgtgggg gattggccat cgtacagctg
     4261 aaaatttgaa gcggctagga atatttagtg tctatgcact aagtcaagcc cctcccccac
     4321 tgctaaagag taggctaggg gtgatagggg agcagttata ctatcattct catggaattg
     4381 attatagtaa aataaatgaa aaatatgttc ctgtttctaa gtcatatggt aagagccaga
     4441 ttttagagcg tgattaccat gatccttttg aggttgtgat agttattcaa gaaatggctg
     4501 aagagattgc catgagattg agaaagcagc atgtaaatac gtctgtagtc catataggga
     4561 ttagatacag taagtttagt gtgaagagtg gatttagaca tcaaatgaaa gtagatgcta
     4621 ctagtagtaa caaggaaatt gttggtcact ttcttacgct attctggcag tattatgaga
     4681 atgaagctgt acgacaagta gaattatctt gcggtggaat tactaggaaa gcaggacttc
     4741 aattaaactt atttgaaaat ccggaaagaa ctattaacca ggagcaatta gacactacta
     4801 tagataagat tagacagcgc tatggtttta gatcgatgat gcatgcaagt agtttgttaa
     4861 ctggagcaac aggattaaaa cgctctgata tctatagtac ccttagtaga gaccaagata
     4921 tccaatatac ttacattttc ttataggctg gacagtcctt ttcttactgt ctactatatg
     4981 agagaataaa caaaaggagg ctttctatga gagtacaaga agtcatatta aacaatggag
     5041 ggagaagata tttagttcta gacgatcaag ggaaaccgat tcaaccagtt ttacaatata
     5101 tgaagtatct agataataca caaaagagtc ccaacacaca gcgtacttac tgctatgcat
     5161 tgagagacta ttttgttttt ttgtctttaa ctgaaacaag ctacgaactt gccaacatca
     5221 aaacaatagc aaattttcta tcctggttag taaaccccac tttaattgaa agagttcaac
     5281 acctaatacc ccccacttta aaaagcgaaa agacagtcaa cttaaaagtt acagctgtac
     5341 tatccttcta caaatttctc taccaatttg agcatattga atatgatgtc gctcagcgag
     5401 cgtatgtaga tgtaaaaggt atcaagcaat ataaaggttt tttacatcac atcaccaaaa
     5461 ataaaagagt atcagaaagt atcttaaaat taaaggaacc caaaagcaga gttgaaacaa
     5521 ttccagactt cactttacaa gcagcgttag gagctacaac gaatgtaagg gatttctttt
     5581 tgcttcggtt actttatgaa acagggttaa gaattggaga aatattgtcg ctgcacaaag
     5641 aagatatctt attcgatctt caccaaggac accgagttcg tctagtttat cgaaaagaac
     5701 aaccgaatga ctctcgtcag aaaaccggct tacgtgaagt tcatatctcc gccaacttaa
     5761 tcgacttatt cgacgactat atgtacagca ttttagattt tgatcgctcc gattctttat
     5821 tcgtaaaagt taaggggaag tcccaaggac taccccttaa ctatcaagat gttatggcaa
     5881 catttaaaag aattgaagga aaaatcgagt accatttaca tccacattta taccggcata
     5941 cccacgctac taagtattac gaacaaacta aagatatcaa aattgttcaa gagcgacttg
     6001 gtcacaaaca catccagaca acaatgaacc tctatttaca tccaacagat aaagaaatcc
     6061 gagcacagtg ggaaaaagcg agtccagctt ttagaatgga ggaataatgg aagcacattt
     6121 tactaagtct tatccattga aagagtacga ggaaaaatta cgagcaatac ttagcacgta
     6181 tacaagaaaa gaaatcttag ctgatggttc tgtccaagag acagttattg aagatgacta
     6241 tcttttagta aatgatattt ggaaacttga tttttttgtc aatattccgc aattccgtga
     6301 acgcctaacg gagtatagag aaaatccggt caatcatata ttcataataa catttaattc
     6361 ggttcaccct atcataaatc tagagttgaa atgtctatac aagttaaaaa tattcaatga
     6421 tgagtggaca gcttactcca gctttcaaaa gcacacgcat cgttatcgag ttattaattt
     6481 tatgcaattg ttctatcctg aatccagctc gttaaaagaa ctagatattg ataaagctga
     6541 agaacaatat attgcctggt tacgtgaaac aggaattgaa gtaacggaag aaaaaaaatt
     6601 tagacatggt cgtcccgtag aaattagaaa agttagaaca gcagccttcc tcagatcagc
     6661 ctacaattca atcatgcact acttggacga tcgtccatta tgggtaagag atgtatggcg
     6721 tttaaaagac ttccaagata gctttgattt tgagtaccat aaatcaagtc cgcaaggatt
     6781 tgttcgcttt gatagcattg aaaataacga gttaaaacaa atggcaaaag attatataaa
     6841 agatcggctt ttaggtaaac ggcacatgag ctggcatagt gcgcaagcat actctagaat
     6901 actcagccgc ttttttaaca tcatttcacc gacagggact gaaaaaaagg ctattcgtaa
     6961 tcttgaaaga aaagatatac tagcctttat tgagtggacg cgttgttatt atgcagagaa
     7021 taatcgcaaa ggattggaga atcacctgaa tcgttgcatg ggagtactac aaaaattctt
     7081 ggaagaatta caattacttg aacataaaga agcacctaga aaatcgatcc ggcaactaat
     7141 taatcctggt gatttcccta aatatactca acacagacag gttaatagta tccctgatag
     7201 cgtcttagag caacttttca gcaatctaaa ttatttacat ccagaggtca ttccaattgt
     7261 ctggattacg ttcaaaacag gtctgaggat atctgacgtt cttaccttaa caaataagtg
     7321 tttgataact gtcaacgaga gtccctatct gcaactagac atttcaaaaa caaaagtgca
     7381 taaccatcgg ataccaattg atacccacat agctgacatt atcacctttt tagcgaagag
     7441 atgtgagcta gaaacaaata tggacaataa tcctaagaga tacttatttc cacgtttatc
     7501 tggaactaga aaaggacgtc cttttacgca aggctttgta agagaagaat tgaatacttt
     7561 ggcaattaaa caaaatattg ctggtgaaga tggagaaatt tatcatttcc gaatgcatga
     7621 atttcgtcat acctacgctg ttaaattact gaataatgga gcggatattt taacagtcca
     7681 agaactattg gcccacgcat ccccagaaat gacgatggtc tatgcaaggt attctgatga
     7741 caataaaaga aaagaattcg aaaaagttct agcaagtggc acattcgagt ttagtcaaaa
     7801 tggtttattg caaaaaatag aaccggatca gttgaataaa gagaatcttg attctctttg
     7861 gcagaatcac aaattgaacg ctatcgataa tccctacggg acttgtatgg ctcgtttaaa
     7921 tgggaagtgt ccgtttatta atgaaccacc ttgtttaagc tgtaataatg ggaatccatg
     7981 taaggattta gctatcggtt tatctgattt agataatgaa aaatatcagt tgcacataaa
     8041 gaccatgaca aaaacgattg aacttttaaa gagcaatggg cgaatggatc tagttgaaaa
     8101 aaatgagcat cttctagaaa aatacactga tattgaacgc aaaatcacgc aaggaagtat
     8161 tatctatgga agatcaaacc ggacagatta ggagaaaatt atgacctttg atcaaaggaa
     8221 acatctgaag atgttacaca agaaaagacg tgccgaaact cttgaaaaag ttgaacaagc
     8281 tatttactat cttgaagcaa caaagcagcc tattaatttc tcgaggatag caaaacaatc
     8341 tggtgttggg aaatcgacac tgtattcaat tccagaagta aaagatcgaa taattatttt
     8401 ccgtgaggtg tctttaggaa agagttatac gcaaaaagta aaaaaagagc aggatactag
     8461 tgtgattcaa tccttaaagc gaaagattca aacgctagaa acagagaaca aagaactgaa
     8521 acttaaaatc aagcatatat acggccaagt ttttgaaaat actgactaaa tcaatttaaa
     8581 agggttgaac tcgcagcatt gaaaaatgtg ctgttacaag ttcaaccctt tcttttccaa
     8641 gtccattcca aggtatcggt atatccttaa aagatcgttt ccttctactg ttctaagttg
     8701 aaagtaaaaa atatggtctt tactgtctac tgtcatatag ctaggtatcc taaaccgggt
     8761 aatatttctc ttattcatca aatagagcag ttcgtcttgt aatgcaaaaa aaggcacatc
     8821 tatcagaacg aagttcaaaa agtcttttgt caatttttct gagttttcag tatggtagtc
     8881 aaattcagca ccttccacat tcaacgtcat gaaagatcac tccacttatt tggattgatc
     8941 atacgaatat gattgattga attactggga ataacttgaa ttccagtatc tggatgtgag
     9001 acaaaaatac ttgtgtccct gaaaccttcg acaactccga taatatctgc ataagcattt
     9061 ccttcagtat tcagctcgct aagctgaatt tcaacaacat ctctggtagt ataagaggat
     9121 tctagcattt ctgagatttc cgtttcgctc atcttcggtt tcctagacca aaatgtattt
     9181 cttccctttt tttcaatatc catttctgcg gtatgttcac ttaaataaaa gcccatccac
     9241 tttgccattc ctcgatcatc gtagtcgcga ataagtggat caggatgata agacataaat
     9301 gattctccca tgttttaaac acctccacta aacctcttca ggaaacggag tttccaaaaa
     9361 agtttctacc atttcctgaa tatcattttg tctaaaaaaa ggaatttcca aataacgaac
     9421 gttgtttttc ctacaccact gccgcttgat ttccatgttt cttaggatat tttgaaatct
     9481 ctttgtactg caacctcgtt tgaagtaatg gtgtgtaccg tgatactcaa tgatgtgcca
     9541 ctgattggat ttttggaaag ctacatcaac acgtagtggt ctattttcaa tagtagtaag
     9601 acccttgaac atcctttcac ggtcgtattt aatcccatag taattcatta gttggcaaat
     9661 gagttgaatc tgccaactcg gttgttggct gggaaccaac ggaaatggtt tgtacaacat
     9721 ttttgccttt ggatgataag aaaggttagc aatgaagact ttctttttcc atccattgat
     9781 agtgatcgtg gctttcgtat gaaggtggat ttttcctaag taatcatagg gtaaatacca
     9841 atcatacagt tttttctgaa tctcaccatt tctcataaat gaaatagaaa caacattgaa
     9901 gttctcttta ataaaaagta gttcattcat aggttaggta ctctttctac agttttatag
     9961 tgactacaag ccatccaaac caccggcacc gccagcatga cctcccacca aattcgcttg
    10021 actcaagctc ctagcgtgtt ctaaagtaga acttgcacgg acaattgaga caaagccata
    10081 cttttctctg atctgatcca ttatttgatc cagcttctca tttttaatct gttcttccgg
    10141 ttcttcgaac aggtttagtt ggcttcctgc atgataaagc agtcctgaat aagacacacc
    10201 gatatttcta actagacagc cggtataaaa tttattgaat aaatacaata ggtgtccagc
    10261 taacttgtca gtgttatcag taggggtaat ctttagttgc cggctaaatc ctttctctaa
    10321 ttcgtcctta gaataaccaa ttgataaatt gaccgttgaa gttttagctt gtctgcggcg
    10381 caaacgaata gcaacctgtt cggccatttc ccgaatcacc aaaggcattt catcaccctt
    10441 gtagtatcgt ggtaaaattt gactgtttcc tagattttca gacttgggga catagcgttc
    10501 ttggattttt gtccgatcaa tgccattggc atgatggtac agctgcaaac cgattacccc
    10561 aaatttttct tttaatcggt aaggcgtagc atgagccaaa tcatagattg tggagacacc
    10621 catattatac aggttttgct tcatacggtg accaatcccc caaaagtcgc taatctcagg
    10681 catagcccaa acctttgttt ctacatcgga atagttccaa gaagcccgca tatttactgt
    10741 gcttttagcc tcgttgtcca gcgccagttt agcaagtaag ggattactgt ttgacatacc
    10801 aacggtagaa taaatcccag tttctctcaa gatatctttt tggatcattt ggctgacaat
    10861 atttagtttt tctttcctag ttaaactttt gtctggtaca aagtagttta aactgtgggt
    10921 tagttcaaca accccttcat cgatggagta ccacataatg tcttcatccg ctgcgtactt
    10981 gcgaacgatt ttttgaattt ttaggttttc cactatgtaa taacgcattc taggaggagc
    11041 tacgataagt tttttcatca ttggattttc ctctaccgta ggtagttccc aagatcttgt
    11101 gacattactg attccaaacg ctttcttcgc catcggactg ctggccaaaa ttaaaccaga
    11161 agtattatcc gcctgactca ttacaaccaa aaggtccttt aagaggtggc gcccccgcgc
    11221 taccagctca cagctggcgt aaaaagattt catatcgata aaggcatagt caccagtggg
    11281 ttctaaatca tagttaaagt tcatcataat caccttatca aactaagtat tttctccaaa
    11341 aagaacacat gttcgttatt atagtacctt gatttactcc cctaagtcaa gaaaatctcg
    11401 ttattcacac cacaaaaaag atgccagcag ctacggacta gtgctaatgg catcttttaa
    11461 agtgaaacta attttttatg gctagaacat ttcttttaat taagtctcta gtttttctaa
    11521 actgcgctaa aatctcttcc tcactaccgg atgctttggc agggtccgat aagttccaat
    11581 gaaaatgttc tttccctttg ggaattaccg gacatttatc tttcgcatcc ccgcaaagag
    11641 tgacgattag atcagcttta ttaaaatagc tcatatcaag caaatctgac gtttgttcag
    11701 aaatatcaat cccgtcttca gccatcactt ttacggcttt tggattcaga ccgtgcgttt
    11761 ctattccggc acttctaatt tcaaattgac tttttggtaa gagcttatgc gcataccctt
    11821 cagccatctg acttctacaa gagtttcctg tacaaagaaa atagattttt ttcatatatt
    11881 ttcacctcta agacgtgctg tttgttcagt atcattagga aaccaatgtt tcgtattatt
    11941 ggctatctta accaataaaa gcataactgg tacttctact agtacaccca ctactgtggc
    12001 taaagtcgct cctgactgga gcccaaataa tgaaatagct accgcaactg ctaattcaaa
    12061 gaaattactc gcaccgatca ttccggcagg tgacgcaata gaatggggga gtttccacaa
    12121 tcttgcccaa ccataagcaa ttgaaaagat aagtaatgtc tgaattgtta aagggatcgc
    12181 aatcaataaa atgtgtagcg gattggctaa tattttctgc ccttgaaaag aaaagataat
    12241 gattagtgtc aacagtaatc caatgatcgt tacggaatca aatttcttta aaaagactgt
    12301 ttcaaagtaa gctaagcctt tccttttaat aatcaatgag cgagtaagga agcctaagaa
    12361 taagggaact actacgaaaa gaacagtgga taatagcaaa gttgccattg gaacgactac
    12421 attatcaaca cctagtaaaa aagcgacaat tggcgcaaac aaaattaaga taattagatc
    12481 attcaccgct acttgaacca aagtataggc agcatcacct ttggtgaggt gactccaaac
    12541 aaagaccatt gcggtacatg gggcggctcc tagaataacc gctccggcaa catattcttt
    12601 tgccaagtct aacggtatcc aacttttaaa cactacataa aagaaaaaag cagcaatcgc
    12661 gtacatagtg aatggcttta tcagccaatt agttacgcaa gtgacaatca atcctttggg
    12721 cttttttgac acgttaacaa tactgccaaa gtcgattttc aacatcattg ggaaaatcat
    12781 taaccaaatt aagatagctg taggaataga aacgttgtaa tattcgaact ggctaagtgt
    12841 tgcgggaatt actggtaaaa actttccgat tgaaattcct agtgccatac atatgactac
    12901 ccacaaggtt agatacttct caaaaacacc taatccttgt ttctctgtgt tttccatttg
    12961 aaccctccat catcaatatc agccaataca tagatagttt tctatgtatt ggccaaaaaa
    13021 ttttataccc caacagggct aaagtctggt tgccattctt caacagcaaa cttgccattg
    13081 gaaagctccg caactttttc aatccattct aattcattga aagaacgagc ttttaataca
    13141 tcattttgtg tatcagctgc atacatgctt tggttaacca gccaccaggt atgggaaatc
    13201 tttgcccgat ccaaatcttc atctaaacgc atggattcat aaaccggtgt tgtttcaggt
    13261 aaagtaacca tcaacacttc cgtgtcatca gaattttgaa ggcgcggcaa aagtttttga
    13321 atagagactg gaacttcacc agaacttctt tccacttccc gagcatagct ttgagtcgaa
    13381 tccaacaaca gtaaagtatg accggtcggt gccgtatcaa tcacgacaat ttcatcatca
    13441 gacttgtcaa caatttcagc aaaggcacgg aatactgcaa tttcctgggt acatggagaa
    13501 cgcagatctt cttcaacgta agctacatca tcgtcattca tagtagctct tgctttggac
    13561 aagacctctt ctttataatc agccaattct ttttcttcat cgatatggct aatagagatt
    13621 ggtaaatcat ccgaaatgaa catgtttaaa tgatccgccg gatcagttgt cgctaaatgg
    13681 acttttttgc cttcctgggc caacttttta gcaatcttga tcgctacagt tgtcttacca
    13741 acgccgcctt tacccattgt aaagataatt ttcttatttg aacggataaa ttcttttaca
    13801 actgtatcta aattcggaaa atccgtcact tctttttctt gttcttcaag tgcaggctgt
    13861 tgatcactta atagtatttg aagcttatca ataccagtca cattgtaagg ccgtagtggg
    13921 atatagaagg tatcaaagtc ttttagtggt tctggcatat tctctagatc atgcgtctgt
    13981 tcttgataga taagttgaga aatttcgtca tcatggactt ccagcaaccc attcacaacc
    14041 aatttttgat tttgaatccc taattttctc agctcttctg aagcacgctc agcttcaatc
    14101 agtggtgctt tttgtgggcg agtaactaga attaaggttg tttgttcagc gtctgttaac
    14161 gtttctactg ctttttcgta catatctttt ttatcgccta gtcctgataa ctgacctaag
    14221 caagaaacac cggtggtatt ttcatccaga taattattcc aagcagaagg cagctgtagc
    14281 atacgcaatg tgtgccccgt cggtgcagta tcaaaaatga cataatcaaa ctgatcggca
    14341 acttcaggat cagtcaaaaa attggcaaac tcattgaaag ccgcaatttc tactgtacag
    14401 gaaccagata gctgctcttc catgttcgct aatgcactgt ctggaagtat tccacggtaa
    14461 gggccaacga tactttcttt atattctgcc gcagccgtaa tcggatcaaa gttagctact
    14521 tgaagattgt cgattccttc aatcggtgtt ggcttattgg ttaaggttgt ttggaaaaca
    14581 tcttgtaaat tagaagccgg atcggtgctt accagcataa cttttttatt gtcttgggcc
    14641 aacgaagtgg ccgtagcaca agcagttgtt gttttaccca caccgccttt tccagtaaag
    14701 aatagatatt tggttaatcc cattcgctcg ggaaggtatt gaatcatttt ttgtttcctc
    14761 cttttataaa tcatggctta ggaaaaggct gtttagcaac agccttcgcc tccgcagcat
    14821 ccgccagaat tgttggcagc ttgtgtgaca aattgaactt ctgcatattt accgaattct
    14881 tctaaggtag gataagcagc ttcttttaca acttcaccat ctaatagagt aaccggtaaa
    14941 atgtcgttgc ctttttcttg aagtaatttc aagatggtcg ggtggttaac aaaggcatct
    15001 gggtcacttg ttaagttgtg acgtgatgct tcaatagagt ctaatccctc aaacgtctcg
    15061 aagactgagg taaccatcag taattcttca tcaacagatg gtccgcaaac gccagttgaa
    15121 caacacatcg ccggttcaaa tagttccaat tttttcatca ttcttttctc ctttacaact
    15181 acagttttta ttgtggcaaa cacattcatc ttcatcagaa aataaatgca tcattgaacc
    15241 cataaattta tctacaaagc tttcggttaa ttgatagtgg tgccattgac cttctttagt
    15301 caccaagaca acacctgctt tttccaaaac cttcatatga tgggaaagcg ttggttgagt
    15361 aaagtcaaag tgagctaaga tatcacacgc acataaactg ccacaagaca gcatatcaat
    15421 aatttttaat cgtttaggat ctgccagggc tttcagcatg accgacattt catcgtaatt
    15481 catttgtttt cctccttaca tagaagttca tctatgtata caatatagac gatcatctat
    15541 atactgtcaa tcgtttctgt cttttttcat agaatggata tgttcagcct actgcaaagc
    15601 ctagtattat cgactttctt caaatttggt attgataagt tctgaaatgg ttggtgggca
    15661 taaaggataa aaaaacgaca agaattacgt tattataacg cttcttgtcg tttttataga
    15721 tatatctata tttctataaa aaataatata gatatataat aatatagata tatctatatt
    15781 tctatattat ttattctgtc attgctttaa attttctcct ttgttcgggg gttaattcat
    15841 tattgacgta agtgtcaata agtaaatcaa ttatttcata atcgaatttt gtcttggtta
    15901 tattctttag agcttgcagt tcttcttttg tttggatgga agtttttatg gtaccttctt
    15961 gatttttaaa tttttgattt ttaatttttt cagcttcagc ctttttatca cttatttctt
    16021 tttcttttgt agaattttcc ttttcattgt aagcctgaga gggttggaaa ttaccaggga
    16081 ttcttttcgc tgtgtttaac aaacctcgtc ctttatttgt tgtcataaat aatcaccttc
    16141 ttatttttct tgagtttcaa agtaatggat tcgttctaac aattcatcac tgacattatt
    16201 aaagaatgaa ataact
//
LOCUS       DASDYK010000053        16162 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.053, whole genome shotgun sequence.
ACCESSION   DASDYK010000053 DASDYK010000000
VERSION     DASDYK010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 16162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16162
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.053"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..289
                     /locus_tag="U0308_001700"
     CDS             <1..289
                     /locus_tag="U0308_001700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316664.1"
                     /translation="YIEKDEEICWKLSFTSCYKVSYETDAKWRGDFKVRNTGPKSGYY
                     AQDISLNRYAENEDFIECSFDASIMTMNIICKEIIVEEVSVIENSFFWKNY"
     gene            complement(362..1123)
                     /locus_tag="U0308_001701"
     CDS             complement(362..1123)
                     /locus_tag="U0308_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM2316665.1"
                     /translation="MKVQRIQAIENLIHEKGSISLDDLCEQFNVSKNTVRRDIAKLLQ
                     KNTIQKVYGGVVSVYNNPEEIRPFENRDTENHTEKQLIGKAAADFIEENDLIFIDSGT
                     TTSCLAAALPTDKDITIITNSLDVINFASEMDNVKLIVIGSTFKTSTKSFVGVENWGF
                     FEKYNITKAFMAATALSTTHGVMNSDILEYEIKRHMMEKAREKFLLVDHTKVDKSALL
                     TYGELAEFDWLVTSKDMAGGCLGYCEDVGVLVRLV"
     gene            1318..2784
                     /locus_tag="U0308_001702"
     CDS             1318..2784
                     /locus_tag="U0308_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEM2316666.1"
                     /translation="MADVRKLKNYIDGEWVESKTDKYEDVINPATGEVLCQVPISTRA
                     ELDQAAVIAEQAFEKWSQVAVPRRARVLFSFQQLLIQHKEELARLITLENGKNLSEAR
                     GEVQRGIENVEFAAGSPTLMMGDSLASIATDVEAANYRYPVGVVGGIAPFNFPMMVPC
                     WMFPMAIALGNSFILKPSERTPLLMEKLVELFSEAGLPKGVFNVVYGAHDVVNGILEN
                     EIIKAVSFVGSKPVGEYVYKTGSANLKRVQALTGAKNHTIVLNDADLEDTVTNVISAA
                     FGSAGERCMACAVVTVEEGIADEFLAALRTAAQNVKIGNGLDDGVFLGPVIREENQKR
                     TIAYIEKGLEEGAKLTVDGRETGLSEGHFVGPTILEDVTTDMTIWKDEIFAPVLSVIR
                     VKNLQEAVRVANQSEFANGACIFTNNAKAIRYFREKIDAGMLGVNLGVPAPMAFFPFS
                     GWKSSFYGTLHANGKDSVDFYTHKKVVTARYSLKGYEE"
     gene            2797..3618
                     /gene="iolB"
                     /locus_tag="U0308_001703"
     CDS             2797..3618
                     /gene="iolB"
                     /locus_tag="U0308_001703"
                     /EC_number="5.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-deoxy-glucuronate isomerase"
                     /protein_id="HEM2316667.1"
                     /translation="MGKLLRKPLNERIAPGITFVQDINQANSPLSYVGFRLIEMEKGA
                     IYQEELTDLECCIVALTGKITVSEGDNIFAEIGTRANVFEKIPTDSVFISGGRTFQVK
                     ADTEKARVALCYSQANRDLPTTLIKASDNSIEQRGKYQNKRLVHNILPDVSEVASSLL
                     VVEVYTDGGNFSSYPPHKHDRDNLPAESLLEESYYHEINPEQGFIFQRVYTDDRTLDE
                     TMAVEHQNAVIVPEGYHPVGVPDGYDSYYLNVMAGPKRVWKFHNDPDHEWILERD"
     gene            3635..4612
                     /gene="iolC"
                     /locus_tag="U0308_001704"
     CDS             3635..4612
                     /gene="iolC"
                     /locus_tag="U0308_001704"
                     /EC_number="2.7.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-2-deoxygluconokinase"
                     /protein_id="HEM2316668.1"
                     /translation="MNLNKHSERKFDLITVGRACIDLNAVEYNRPMEETMTFSKYVGG
                     SPANIAIGTAKLGLKVGFIGKISADQHGRFIEKYMRDLNINTDGMVKDTEGRKVGLAF
                     TEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKA
                     VSLARKNDVAVAFELDYRPYTWTNTEETAVYYSLVAEQADVIIGTRDEFDMMENQVGG
                     KNEATKAHLFQHQAEIVVIKHGVEGSFAYTKAGETFQAKAYKTKVLKTFGAGDSYASA
                     FLYGLFSGESIETALKYGSAAASIVVSKHSSSDAMPTADEIKALIAQAE"
     gene            4625..6541
                     /gene="iolD"
                     /locus_tag="U0308_001705"
     CDS             4625..6541
                     /gene="iolD"
                     /locus_tag="U0308_001705"
                     /EC_number="3.7.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
                     acylhydrolase (decyclizing)"
                     /protein_id="HEM2316669.1"
                     /translation="MTEKTIRLTTAQALVKFLNQQYIEVDGEMAPFVDGIFTLFGHGN
                     VVGIGQALEEAPGHLKVYQGKNEQGMAHAAIAYAKQKNRQRIYACSTSAGPGSANLIT
                     AAGTALANNLPVLFLPADTFATRQPDPVLQQLEHESSTAITTNDGFQAVSRYFDRVQR
                     PEQLMSALIRAFEVMTNPASAGPATICIAQDTEGEAFDYPVEFFQKRIHYLNRQIPTK
                     RELTEAARLIKASKTPVIIVGGGARYSRAREELIALSEQTNIPLVETHAGKSTLEFDF
                     KNNLGGTGILGTLAANKAIRDADLVIGIGTRYTDFTTSSKTAFDPTTKFININVSRMQ
                     TYKLDAFQVVGDARATLAELAPLLQDYQTQFGNKIAAYKTEWLDERARLQNTKFNREA
                     FTPEIKVQFDQATLNEYADRLQTEFTQTEALITINDNVAPDSIVVCSAGSLPGDLQRL
                     WNPAVPDTYHLEYGYSCMGYEINGALGAKMAAAKKQEVYAIVGDGSFCMSHSELLTSL
                     QYGKKINIMLFDNSGFGCINNLQMANGSDSFFCEFRDSDNQIMQVDYAKIAEGYGAKV
                     YRANTKEDLISALEDAKTQSKTTLIEMKVLPKTMSEGYLNWWNVGVSEVSNKESIKQA
                     YEEKQANLKNARLY"
     gene            6673..7044
                     /locus_tag="U0308_001706"
     CDS             6673..7044
                     /locus_tag="U0308_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chaperone"
                     /protein_id="HEM2316670.1"
                     /translation="MEVFAEYLAEIENPDHRARTQEVLTWVAETFPDLKPEIKWNTPM
                     FTNNGTFIIGFSIAKQHMSVSPEVAGIERFEADIKEAGYSHTKGIFRITWAKPVDYDL
                     LAKIIEFNIQDKANYTSFWRV"
     gene            7138..7506
                     /locus_tag="U0308_001707"
     CDS             7138..7506
                     /locus_tag="U0308_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316671.1"
                     /translation="MRIFCGIMSIQAGFIGALAEILSPDSKKNNLFMIPEDLAASSGY
                     LMSLAMVLAGILIICAYRNDFLIFMALILWLFGLIFGLIFTPSYSGFYFRPIVCLISF
                     LMGLFIFTDYTRHQDTGEER"
     gene            complement(7530..8645)
                     /locus_tag="U0308_001708"
     CDS             complement(7530..8645)
                     /locus_tag="U0308_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HEM2316672.1"
                     /translation="MAERKVSWLELFFDLIFVTAVASTTHLLLSVDNHPDKTAVYFGE
                     YLLMVTPMFWAWVGQTMFFNRFGEKIKLPELYMLPQMFFLILMTASFDLTFSNTYYTF
                     LIGYLGIRLITVIQYFVISKQLTGNARKVAILLGSVFLLGVLTTATSVFFEGFARYLV
                     MYLGIAVDIILPLFLAKTLRKVPVDFPHLAERFGLFVIITFGESIVAITTILVGHTLD
                     PYTIGYTLLGFLIICTLWASYFHSFEKIVNHHKETHGQYLIYGHFFIIISVMLLAANV
                     HLLFEGHLERNVLLLMLFGSVAVFFVSKQFVFAAHKKAEVTFSFWKDALLLLLLVGLF
                     FVNLYSDFPLFVSFVSIWVCALVDLGLQFGTSRSARM"
     gene            8776..9441
                     /locus_tag="U0308_001709"
     CDS             8776..9441
                     /locus_tag="U0308_001709"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEM2316673.1"
                     /translation="MVKTWEEFLKQEAKQPYFIELMEAVKDARAKGNVYPTEEDMFSC
                     FRLCPYDQVKVVILGQDPYHGPGQAHGLSFSVQKGVRIPPSLRNIYKELKTDLDIEPA
                     DHGYLAKWAEQGVLLMNTSWSVEEGKAGSHKKLGWATFTDHVLEELNNYDKPLVFILW
                     GNHAIKAASGITNPQHLLIKGVHPSPLAASRGFFESKPFSKTNAFLEEHGRKPIDWDL
                     NEQ"
     gene            9609..9908
                     /locus_tag="U0308_001710"
     CDS             9609..9908
                     /locus_tag="U0308_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316674.1"
                     /translation="MKHNFTEDDFVYGESWGLVHRGVLEDKEVERMKALRDKVVGKKG
                     VAQTTLKPIGSVRIDGEVYEARLKTGYLEVGKPIIAVGIDFGYVLVNEDIQEGEK"
     gene            9905..10849
                     /gene="floA"
                     /locus_tag="U0308_001711"
     CDS             9905..10849
                     /gene="floA"
                     /locus_tag="U0308_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463922.1"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HEM2316675.1"
                     /translation="MTMIGPIIIAVLIIIFLIVFFTLVPVGLWISALSARVPVGLGTL
                     IGMRLRRVVPSRVVKPLIKAVKAGLDLEVNQLESHYLAGGDVDNTVDALIAAHRANIE
                     LDFSRAAAIDLAGRDVLEAVQTSVTPKVIRTPEFTGVAQNGVEVKVITQITVQSNIER
                     IVGGAGEDTVIARVGEAVVSTVGETREHTDVLENPNSISKKVQEQGLGDGTAYTILSI
                     DIAEMRIGDNIKAKLDIEKANADMEVAQAAASKRKAEAIALEQENRAAVVAAEAEVPR
                     ALSRALEEGNLGVMDYYKMENVQSDTAMRESIAHEDEK"
     gene            10884..11333
                     /locus_tag="U0308_001712"
     CDS             10884..11333
                     /locus_tag="U0308_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316676.1"
                     /translation="MDLSDFLNSGWESVLVVLGIVGVIINFLSKAGKGTEEENKKAPQ
                     PRPNLRSMHQASRTQTTKKPEKRKVSQGTFTQNKEQDKVIAEQKAAQQKMLREIRRES
                     DVAKGKNIIKSTSSHHKKARKLRGRLQEAIITKEILDKPVSLRKNHL"
     gene            11477..12160
                     /locus_tag="U0308_001713"
     CDS             11477..12160
                     /locus_tag="U0308_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEM2316677.1"
                     /translation="MKIIATRRKIFFAFIALMISFSVLFLPTTNASAATTYKMTTTAD
                     VNVRAADNTKGKVIGFYKKGTTVTFTAKTKNNWYKTTYKGKVGYVSGKCVTTYKAPVA
                     TTQSFTALNNEARKHIGKRYKIGATGPSCFDCSGYTQYVYSKGVKKSIPRTAKQQYAS
                     AKKIKAQELKKGDLIFFNYGKGVAHVGIYVGNGKMLNAQNNGVKYDTITSGYWKKYIA
                     GYGRVANLK"
     gene            12216..12641
                     /locus_tag="U0308_001714"
     CDS             12216..12641
                     /locus_tag="U0308_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2316678.1"
                     /translation="MQYKIKEMPLEELEPKVVEGLLEHKERLGYDIPKKDTEYIGFAA
                     LSEVGEIVGGVTAKISYGELYVSLLSVDPSTQGSGVGTELMAQIERYGRANNCHHISL
                     TTFSYQAPGFYKKCGFTELGRVKDFPIIGEEKYFFIKYL"
     gene            complement(12644..13444)
                     /gene="proC"
                     /locus_tag="U0308_001715"
     CDS             complement(12644..13444)
                     /gene="proC"
                     /locus_tag="U0308_001715"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEM2316679.1"
                     /translation="MKKIGFIGAGNMGTAMIRGLAQANLDNSEAIIVGGRNLEKLKPL
                     EAAFTGLQITTDTEKLVEQADIIILAVKPYTIPEILTSVKEQLTPDKIIISVAAGVTI
                     QDLEELTSAKTKIVRVMPNTPALVGEAMSSISPNINVSSEEINEVTAIFTSFGEAEVV
                     SENLMDAVIGVSGSSPAYVYMFIEALADGAVLSGMPRDKAYKFAAQAVLGAAKTVLET
                     GEHPGKLKDMVTSPGGTTIEAVKSLENDGFRSAVINAVQAAANKNSSM"
     gene            13792..14004
                     /locus_tag="U0308_001716"
     CDS             13792..14004
                     /locus_tag="U0308_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316680.1"
                     /translation="MDEWWLIRIIKYIEIVSKAGHLTTKKEHFFDNCPQVSKSKQHGK
                     LALDTIFDAMFLMVESAINGVFISYN"
     gene            14519..15742
                     /locus_tag="U0308_001717"
                     /pseudo
     CDS             14519..15742
                     /locus_tag="U0308_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728127.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5011 domain-containing protein"
     gene            15859..>16162
                     /locus_tag="U0308_001718"
     CDS             15859..>16162
                     /locus_tag="U0308_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2316681.1"
                     /translation="MPKIAKGNRLENVAFEYIKNKITTGEYPTGYRVVEAKLSQELNM
                     SRTPIRRAIINLCHSGFLVHQYNRGAFVQNTEVTITEFFSRMKLVELLMYESTEKLI"
BASE COUNT         5446 a         2996 c         3334 g         4386 t
ORIGIN      
        1 ttatatagaa aaagatgagg agatttgttg gaagctatca tttacttcct gctataaagt
       61 ttcctatgag accgatgcaa aatggcgtgg agatttcaaa gttagaaata cagggccgaa
      121 atcaggctat tatgctcaag acatttcgtt aaatagatat gcggaaaatg aagactttat
      181 tgaatgttct tttgatgcat caattatgac aatgaatatt atttgtaagg aaatcattgt
      241 agaggaagta agtgtcatag aaaattcgtt tttttggaaa aattattaaa ataaagttca
      301 gagtttgtga atataaaaag aagtcccatt tcatcaaatg gggcttcttt catcacacaa
      361 actaaaccaa cctcaccaaa accccaacat cctcacaata ccccaaacac ccaccagcca
      421 tgtccttcga cgtaaccaac caatcaaatt ccgccagctc cccgtaagta agcaaagccg
      481 acttatccac cttcgtatga tccactagca aaaatttctc cctagctttt tccatcatat
      541 ggcgcttaat ctcatactcc aaaatatccg aattcatcac cccgtgcgta gtagacagcg
      601 cagttgcggc cataaaagct ttcgtaatat tatatttctc aaaaaatccc caattctcca
      661 cgccaacaaa tgatttagta ctcgttttaa aagtcgagcc aataacaatc aatttcacat
      721 tatccatttc actcgcaaaa ttaatcacat ctaggctgtt cgtaataata gtaatatcct
      781 tatccgttgg cagagccgca gcgagacagc tagtcgttgt gccggaatca ataaaaatca
      841 aatcattttc ttcaataaaa tcagccgccg cttttccgat aagctgtttt tctgtgtgat
      901 tttctgtatc acgattttcg aacggccgaa tttcttcggg attattataa acagaaacga
      961 cgccaccata gactttttgg atggtgtttt tttggagaag tttggcaatg tctcggcgaa
     1021 cggtattttt ggaaacattg aattgttcgc ataaatcgtc gaggctaata ctgccttttt
     1081 cgtgaattaa attctcaatc gcttgaatgc gttgtacttt cattttaaat tcatcctttg
     1141 gcaaaattat tttaattaca ctatttataa cacatgctca aaaggtaatc aactatgatt
     1201 ttttatggtg aagttagtga caaaaattaa attgactctc taattttatt ggcttaagat
     1261 ggggttataa tcgattaatg gttaacttat gagtaatttt aagtggaggg attttttatg
     1321 gcagatgtac ggaaattaaa gaattatatt gacggcgaat gggtcgagag taagacagat
     1381 aaatatgaag atgtcatcaa tccggcgacg ggggaagtgc tgtgccaagt gccgatatcg
     1441 acacgcgcag aattagatca ggcggctgtc attgctgaac aagcttttga aaaatggagc
     1501 caagttgctg taccaagacg tgcacgggtt ctatttagtt tccaacagtt actcattcaa
     1561 cataaagaag aactagcaag actgattaca ctcgaaaatg gtaaaaattt atccgaagca
     1621 cgcggtgaag tccaacgtgg tattgaaaat gtcgagttcg cggctggatc gccaacacta
     1681 atgatgggtg attcgctggc ttcgattgca accgatgtgg aggcggcaaa ttatcgctat
     1741 ccggtcgggg ttgttggtgg aatcgcacca tttaacttcc cgatgatggt accatgttgg
     1801 atgttcccaa tggccattgc gcttggtaac tcgtttattt taaaaccatc cgagagaacg
     1861 ccacttttaa tggagaaatt ggtggaatta ttttctgaag cgggtcttcc aaaaggtgta
     1921 ttcaatgtag tgtacggtgc gcatgatgtg gttaacggaa ttttagagaa cgaaataatt
     1981 aaagcggttt cttttgttgg ttctaagcca gttggtgaat atgtctacaa aacagggagc
     2041 gcaaatttaa aacgagtgca agccttaaca ggtgcgaaaa accatacaat tgtgcttaat
     2101 gatgcggatt tagaagatac cgtgacgaat gttatttcag cggcattcgg atcggcgggt
     2161 gaacgttgta tggcatgtgc ggtcgtcaca gttgaagaag gcatcgcgga tgagtttcta
     2221 gcggcacttc ggacagccgc gcaaaatgtg aaaattggaa atgggttaga cgatggcgtt
     2281 ttcctcggtc ctgtaattcg cgaagaaaac caaaaacgca cgattgctta tattgaaaaa
     2341 ggcttggaag aaggcgcgaa attaacagta gatggtcggg aaactggact ttcagaaggg
     2401 cactttgttg gtccaacaat tttggaagat gttacgacgg atatgacgat ttggaaagac
     2461 gagattttcg caccagtttt atccgtgatt cgtgtgaaaa atctccaaga agctgttcgg
     2521 gttgcgaatc aatctgaatt tgcaaatggc gcttgtattt tcactaataa tgccaaagca
     2581 attcgctact ttagagaaaa aatcgacgct ggaatgcttg gtgtgaattt gggcgtacct
     2641 gctccaatgg cgtttttccc gttttctggt tggaaatcgt ccttttatgg aacgcttcat
     2701 gctaacggca aagacagcgt ggatttttac acgcataaga aagttgtcac tgcgagatat
     2761 tcattaaaag gttacgaaga ataggagggc gcaaaaatgg gcaaactgtt acgaaaaccg
     2821 ttaaatgaaa gaatagcgcc tggcattacg tttgtgcagg atattaacca agctaattct
     2881 ccgctaagtt atgttggttt tcgcttaatt gaaatggaaa aaggtgctat ttatcaggag
     2941 gagcttactg atttagagtg ttgtattgtt gcgcttactg ggaaaattac agtgagtgag
     3001 ggtgacaata tttttgcgga gattgggaca agagcgaatg tctttgaaaa aattccgaca
     3061 gatagcgtgt ttatttctgg cggacggacg tttcaagtga aggcggacac agaaaaagct
     3121 cgtgtagcgc tttgctactc ccaggcgaat cgagacttgc caacgacact tattaaagct
     3181 agtgataatt cgattgagca gcgcggaaaa tatcaaaata aacgactggt acataacatt
     3241 ttgccagatg taagtgaggt tgcgagcagt ttgttggttg tggaagtgta tacggatggc
     3301 ggaaattttt cgagttatcc gccgcataaa catgaccgcg ataatctgcc agcggagtcg
     3361 cttttggaag aaagttatta tcatgaaatt aatccggagc aaggttttat ttttcaacgt
     3421 gtctatacgg atgaccggac gcttgatgaa acgatggctg tggagcatca aaatgcggtt
     3481 atcgttccag aaggctatca cccagttggc gtgccagatg gatatgattc atattatttg
     3541 aacgtaatgg ctggaccgaa acgggtttgg aaatttcaca acgatccgga ccatgaatgg
     3601 attttagaac gagactaaga ggaggatttg gagcatgaat ctaaacaaac atagcgaacg
     3661 aaaatttgat ttaatcacag taggacgcgc ttgtattgat ttgaacgcag tcgaatacaa
     3721 tcgtccaatg gaagaaacga tgactttttc taaatatgtg ggtggttccc cggcaaatat
     3781 tgcgatagga accgcaaaac taggcttaaa agtaggcttt atcggcaaaa tttctgctga
     3841 tcaacatggt cgttttattg agaaatatat gcgtgatttg aatattaata cggacggaat
     3901 ggtgaaagat acggaaggcc gcaaagttgg cttggcgttt acggaaatta aaagcccaga
     3961 tgaatgcagt attttgatgt atcgcgaaaa tgtagcggat ttgtatttaa cgccagaaga
     4021 aatttcggaa gattatataa aagaggctcg cgtgctgctc atttctggaa cagctttagc
     4081 gcaaagtcca tcgcgggaag ctgttttaaa ggcagttagt ttagctcgga aaaatgatgt
     4141 agccgttgct tttgaattag attatcgccc ttatacgtgg acaaacaccg aagaaacggc
     4201 ggtttattat tcacttgtcg cggaacaagc ggatgtgatt attggcacgc gcgacgaatt
     4261 tgatatgatg gaaaatcaag tcggtggcaa aaatgaagca acaaaagcgc atcttttcca
     4321 acatcaagca gaaattgttg tcattaagca tggggtggaa ggctcattcg catatacaaa
     4381 agcgggagaa acattccaag caaaagcata taaaacaaaa gtgctcaaaa cattcggcgc
     4441 gggagattcc tacgcatcag ccttcttata cggtttattt agcggtgaaa gtatcgaaac
     4501 agcccttaaa tacggaagtg ccgcggcttc gattgttgtt agcaagcata gttcctcaga
     4561 cgcgatgcca acagctgatg aaatcaaagc gctcattgcg caagcggaat aggaggagat
     4621 tatggtgact gaaaaaacga ttcgactaac aaccgcacaa gctttggtaa aatttttaaa
     4681 tcagcaatat atcgaagtgg acggcgaaat ggcaccgttt gtggatggta ttttcacgct
     4741 gtttggacat ggaaatgtgg ttggtatcgg gcaagccttg gaagaagccc caggtcattt
     4801 aaaagtgtat caaggaaaaa atgagcaggg catggcgcac gcggcaatcg cttatgcaaa
     4861 acaaaaaaat cgccagcgca tctacgcgtg ttccacatca gcaggaccag gttccgcgaa
     4921 cttaataaca gcagccggca ccgcacttgc aaacaattta cctgtgttat tcctgccggc
     4981 cgacacattc gcaaccagac agcccgaccc agttttgcaa caattagagc atgagtcgag
     5041 cacggcaata acaaccaatg atggcttcca agcagtctcc agatattttg accgtgtgca
     5101 gcgaccagaa caactcatga gcgccctgat tcgcgctttc gaagtaatga ccaacccagc
     5161 gagcgcggga ccagcaacaa tctgcattgc gcaagacaca gaaggagaag cattcgatta
     5221 tccagtcgaa tttttccaaa aacgaattca ctatcttaat cggcaaatcc cgacaaagcg
     5281 tgaactaacc gaagcagctc ggctcatcaa agcgagcaaa accccagtta tcatcgtcgg
     5341 aggtggcgcc cgctattcaa gagcacgcga agaattgatc gccctttccg agcaaaccaa
     5401 cattccgctc gtcgaaacac atgccgggaa atcaacgctt gagtttgact tcaaaaacaa
     5461 cctaggtggc acgggaatcc tcgggacgct tgctgccaat aaagctatcc gtgacgccga
     5521 tttagtcatc ggaattggca cgcgctatac cgatttcaca accagttcca aaacggcatt
     5581 cgatccaaca accaaattta tcaatatcaa tgtcagccgc atgcaaacat acaaattaga
     5641 tgccttccaa gtggtcggtg acgctagagc aaccctagct gaactcgcac cacttttaca
     5701 agattatcag actcaatttg gaaacaagat agccgcatac aaaaccgagt ggctagacga
     5761 aagagcacgg ctacaaaaca ccaaattcaa ccgagaagca tttacgccag aaatcaaagt
     5821 tcaattcgac caagcgacct taaacgaata tgcagaccgc ttgcagaccg aatttacgca
     5881 aacagaagca cttatcacaa ttaatgacaa cgtggcaccg gatagcattg tcgtttgttc
     5941 ggccggttca cttcccggag atttgcaacg actctggaac ccagccgtac cagacaccta
     6001 tcacttagaa tatggctatt cctgcatggg ctacgaaata aacggtgctc tcggcgcgaa
     6061 aatggccgca gcaaaaaaac aagaagtata cgccatcgtt ggcgacggca gcttctgcat
     6121 gtcacactca gaactactaa catccttaca atacggcaaa aaaattaaca ttatgctctt
     6181 cgataattcc ggttttggct gcattaacaa cctccaaatg gcaaacggca gcgacagttt
     6241 tttctgcgaa ttccgcgata gcgacaacca aatcatgcaa gtcgattacg ccaaaattgc
     6301 agaaggatac ggagcaaaag tctatagagc caacacgaaa gaagatttaa tcagcgcact
     6361 ggaagacgca aaaacacaaa gcaaaactac tttgatcgaa atgaaagtac taccaaaaac
     6421 tatgtcagaa ggctatctta attggtggaa tgtgggagtt tccgaagttt caaacaaaga
     6481 aagtatcaag caagcatacg aagaaaaaca agcaaacctg aaaaatgccc gactatatta
     6541 agcaaaacaa aaacaagtcc atcaccggac ttgtttttgt tttgccactt caatagcccc
     6601 gccttgcatc acaccagttt ttctttataa taaaaagtaa ctgtaagatt atgtttttta
     6661 ggaggaaata atatggaagt ttttgcagaa tatttagctg aaattgaaaa tccggatcac
     6721 cgcgcgagaa cacaagaagt tttaacatgg gtggcggaaa cttttccaga cttaaagcca
     6781 gaaatcaaat ggaatacacc gatgtttaca aataatggca cgttcataat cggcttctct
     6841 attgcaaaac agcatatgag cgtttcccca gaagtggctg gaatcgaacg tttcgaagca
     6901 gacattaaag aagcgggcta tagtcatacg aaaggtattt tccgaattac gtgggctaaa
     6961 ccagttgact atgacctact agcaaaaatt atcgagttta atattcaaga taaagcaaat
     7021 tatactagtt tttggcgcgt ttaagtgatt tttagttact ttgtcgcgta gtaaatccag
     7081 attttttatg ccataattaa taagctaaaa tgtattttta taaaagagtg gtgtgaaatg
     7141 cgtatttttt gtgggattat gtcaatccaa gcaggcttta ttggtgctct tgctgaaata
     7201 ctaagtccgg acagtaaaaa aaataactta ttcatgatac cggaagatct tgcggcatca
     7261 tcaggctatt taatgtctct tgcgatggtt ttagcgggaa ttctaataat ttgtgcttat
     7321 cgaaatgatt ttctaatatt catggcacta attttatggc tctttggact tatttttggg
     7381 ctcattttca ccccgagtta ttcgggtttt tatttccgcc caatcgtatg tttaataagc
     7441 tttttaatgg gcctatttat ttttacagat tacacaaggc accaagacac aggcgaggaa
     7501 aggtgagcga aatgctcatc tttttttatt tacattcgtg ccgaccgcga agtcccaaac
     7561 tgcaaaccaa gatccaccag cgcacaaacc caaatactca caaaactaac aaatagagga
     7621 aaatcactat acaaattaac aaaaaacagc cccactagaa gtaacaataa caacgcatct
     7681 ttccaaaaag aaaatgtcac ttcggccttt ttatgagcag caaaaacaaa ttgtttcgaa
     7741 acgaaaaaca cagctacaga accaaacaac atcaataaca aaacattgcg ttccaaatgc
     7801 ccctcgaaca acaaatgcac attcgccgca agtaacatca ctgaaataat aataaagaaa
     7861 tgtccataaa ttaagtactg gccatgggtt tctttatggt ggttgacaat tttctcaaag
     7921 ctatggaaat acgatgccca aagcgtacaa ataattaaaa agccaagcaa cgtgtaccca
     7981 atcgtatagg gatcaagcgt gtgcccaact aaaatagtcg taatcgcaac aatactttca
     8041 ccaaatgtga tgataacaaa taatccaaaa cgttccgcaa gatgtggaaa atcaaccggc
     8101 actttgcgca atgttttagc taaaaataac ggtaaaataa tatcaactgc aatcccaaga
     8161 tacatcacta aataacgcgc aaatccttca aaaaacaccg aagtcgcagt tgtcaaaaca
     8221 cctagtagaa aaacactccc aagaagtatc gccactttcc gcgcatttcc cgtcaactgc
     8281 ttactaataa caaaatactg gataaccgta attaagcgaa tacctaaata accaattaaa
     8341 aaagtataat acgtatttga aaacgttaaa tcaaaactcg ctgtcatcaa aattaagaaa
     8401 aacatttgcg gcaacatata aagttcgggt agtttgattt tctcaccgaa gcgattgaaa
     8461 aacattgtct gcccaaccca cgcccaaaac atcggcgtga ccatcaataa atattcgcca
     8521 aaataaacag ctgttttatc cggatgatta tcgacgctaa gtaacagatg cgtcgttgaa
     8581 gcaacagcag ttacgaatat taaatcaaaa aatagttcta gccaagaaac ttttctttcc
     8641 gccacaatct caccccatta ttatttcttt tttcaagtat accacgtgaa tccgcctgcc
     8701 ttttgacagt tgctcgccgt gaaaagtata atggaaggac aaaatcatgg aactactgag
     8761 atgggagaat taaaaatggt aaaaacatgg gaagaatttt taaaacaaga agcgaaacag
     8821 ccttatttta tagaattaat ggaagcagtt aaggacgcga gagcaaaggg gaatgtctat
     8881 ccgactgaag aagatatgtt ttcgtgtttc cgcttatgtc cgtatgatca agtgaaagtt
     8941 gttattttag gacaagaccc gtatcatggt cctggacaag cgcatggcct aagcttctcc
     9001 gtgcaaaaag gggtgcgaat tccgccaagt cttcgtaata tttataaaga attaaagaca
     9061 gacttagata ttgaaccagc tgaccacggc tatcttgcca aatgggcaga gcaaggcgta
     9121 cttttaatga acacgagttg gagcgtggaa gaaggcaaag ctggtagcca caaaaaacta
     9181 ggctgggcaa catttacaga tcacgtttta gaagaactaa ataattacga caaaccactt
     9241 gtatttattt tatgggggaa tcatgctata aaagccgcaa gtggcatcac aaacccgcaa
     9301 catttactta ttaaaggagt acacccatca ccgcttgccg cgagtcgagg cttttttgaa
     9361 agcaaaccat tttcgaaaac gaatgcattt cttgaggaac atggaagaaa accaattgat
     9421 tgggacttaa acgaacagta aaaaaatacg ttattacaaa attttgtttt ttctattata
     9481 tagtttttta caaaagtgaa aaaatttaca taattcgcct aaaagctttt tacataaggt
     9541 ttctttcatg ttatggttat tataggagaa agtaaaattt aaaaaagttc ctaaagaagg
     9601 tgactagttt gaagcataat tttacagaag atgactttgt ttatggagaa tcatggggac
     9661 tcgtgcatcg gggggtttta gaggacaaag aagtagaaag aatgaaagcg ctacgagaca
     9721 aagtagtggg taaaaaaggc gtagcacaaa cgacacttaa gccgataggt agtgtcagaa
     9781 tagacggaga agtctatgaa gctcgcttga aaacaggtta tttggaagtt ggaaaaccaa
     9841 taattgcagt aggtatcgat ttcggatacg tactagtcaa tgaagatata caggagggag
     9901 aaaaatgaca atgattggac ctattattat cgcagtattg attatcatct ttttaatcgt
     9961 atttttcact ttagtaccag tggggttatg gattagtgca ttatccgcac gtgtaccagt
    10021 aggactagga actttaatcg gaatgagatt gcgtcgggtt gtaccttctc gcgttgtaaa
    10081 accgttaatt aaagcagtaa aagctggact tgatttagaa gtaaaccaac ttgaaagtca
    10141 ctatttagca ggtggggacg tggataacac agtagatgcg ttaatcgccg cacaccgcgc
    10201 aaatattgaa ttagatttca gccgtgcagc agcaattgac cttgctggac gtgacgtact
    10261 tgaagcagta caaacttccg taacaccaaa agttatccgt acacctgaat ttactggtgt
    10321 ggcacaaaac ggggtagaag taaaagttat tacgcaaatt accgtacaat ccaatattga
    10381 acgtatcgtc ggtggtgctg gggaagatac agttatcgct cgtgtcggtg aagccgtagt
    10441 ttctacagtc ggtgaaacga gagaacatac agatgtactt gaaaatccaa acagcatttc
    10501 gaaaaaagtc caagaacaag gacttggaga cggaactgct tacactattt tatccattga
    10561 tatcgctgaa atgcgtattg gtgacaacat taaagcaaaa ctagacatcg aaaaagccaa
    10621 cgcggacatg gaagttgctc aagcagctgc atcgaaacgt aaagcagaag cgattgccct
    10681 agaacaagaa aacagagcag cggttgtagc cgcagaagca gaagtaccac gtgcgctatc
    10741 tcgcgcttta gaagaaggta accttggtgt aatggattat tacaaaatgg aaaatgtaca
    10801 atcagataca gctatgcgcg aatcgattgc acacgaagac gaaaaataaa ccttgatctt
    10861 ttgcaagaaa gaaggtgttt tcaatggatt taagtgattt tctaaatagt ggttgggaaa
    10921 gtgttctagt tgtccttggt attgttggtg tcattataaa tttccttagc aaggccggta
    10981 aaggcacaga agaggaaaat aagaaagcgc cacaacctag accaaatttg cgttcaatgc
    11041 accaagcaag ccgtacgcaa accactaaga aaccagaaaa acgcaaagtg tcacaaggga
    11101 cattcacaca aaataaagaa caagacaaag taattgctga acaaaaagca gcgcaacaaa
    11161 aaatgctaag agaaatccgc cgagaatcgg atgtggcaaa agggaaaaac atcattaaaa
    11221 gcactagtag tcatcacaaa aaagcgcgta aattgcgcgg aagattacaa gaagcgataa
    11281 ttacgaaaga aatccttgat aagcccgttt ctttacggaa aaatcatcta taaaagcaaa
    11341 cccaagaact agtttcttgg gttttttgtt tctgtgtcaa aactgttaca taataacgcc
    11401 aagttttaaa atccctgtat tacaactgta acattgacct gctatgctgt gtgtatataa
    11461 aaaaggggtg cgtggattga aaataatagc aacgagaaga aagatttttt ttgcgtttat
    11521 agctttaatg atttcttttt cagtactatt tttaccaaca actaacgctt cagcagcgac
    11581 tacatataaa atgacgacaa cggctgatgt aaatgttcgc gcagcagaca acaccaaagg
    11641 taaagtcatc ggtttttaca aaaagggtac aacggttact ttcactgcta aaacaaaaaa
    11701 caactggtat aaaacgacat acaaaggcaa agttggttat gtttcaggta aatgtgtgac
    11761 tacatataaa gcacctgttg caacaacgca aagttttacc gcattaaata acgaagcaag
    11821 aaaacacatt ggcaaacgct acaaaattgg cgctactggc ccaagctgtt ttgattgttc
    11881 aggttacaca caatatgtat actctaaagg agttaaaaaa tccattcctc gtacagcgaa
    11941 gcaacaatat gcctctgcta agaaaattaa agctcaagaa ctaaaaaaag gtgatttgat
    12001 tttcttcaat tatggtaagg gtgttgcaca tgttgggatt tatgttggaa atggcaaaat
    12061 gcttaatgcg caaaataatg gcgtaaaata cgacacaatc acatctggct attggaaaaa
    12121 atatattgct ggatatggac gagtagcaaa tttaaaataa ttttactgag cgtcactttt
    12181 tagtgatgct tttttgtatg aaggaggagt tagggatgca atataaaata aaagaaatgc
    12241 cactggaaga actagaacct aaagtagtag aggggctttt ggaacataaa gaaagattag
    12301 gttatgacat tccaaaaaaa gacacagagt atattggctt tgcggcttta agtgaagtag
    12361 gggaaatagt tggaggagtt acagcgaaaa tcagctacgg agaattatat gtgtctcttc
    12421 tttctgttga tccaagcaca caaggatcgg gcgtgggtac agaattgatg gcccaaatag
    12481 aaagatatgg tagagcaaat aactgccacc atatctcctt aacaacattt agttaccaag
    12541 ccccaggatt ttataaaaaa tgcggtttta ctgagcttgg acgtgtaaaa gattttccta
    12601 taataggaga agaaaagtac ttttttatta aatatttata gaattacatc gaactatttt
    12661 tgtttgcagc agcttgaact gcattgataa cagcggaacg gaaaccatca ttttctagtg
    12721 atttcactgc ttcaattgta gttccgccgg gagaagtaac catatcttta agtttacctg
    12781 gatgttcgcc ggtttctaga accgtttttg cggcacctag cacagcttgt gcggcgaatt
    12841 tatatgcttt atcgcgaggc atgccactta ggacggcgcc gtctgctaaa gcttctatga
    12901 acatataaac ataagctggt gaagaaccgc tgacgccaat aactgcatcc atcaaattct
    12961 cggaaacaac ttccgcttct ccaaaactag taaaaatagc tgtaacttca ttaatttctt
    13021 cagatgatac gtttatgtta ggcgaaatag atgacattgc ttcaccgaca agcgctggtg
    13081 tatttggcat cacacgaaca atttttgttt ttgcggaagt gagttcttct aaatcttgga
    13141 tagttacgcc agctgctaca gaaataataa ttttatcagg tgttagctgc tcttttaccg
    13201 acgttaaaat ttctgggata gtgtaaggtt tcaccgctaa aataataata tctgcttgtt
    13261 ctacgagttt ttcggtatcg gttgttattt gcaggccagt aaatgccgct tccagtggtt
    13321 ttaatttttc gagatttcga ccaccaacaa tgattgcttc gctgttatct aaattcgctt
    13381 gtgctaagcc ccgaatcatc gcagttccca tattacctgc gccaataaag ccgattttct
    13441 tcattttatt cgcccctaac aaaattcttt ttttctatta tctcatgtta cacggctttg
    13501 tccagttttt gctgaaggct atcattgtgt cacagaggct tattctaaat acagcgatat
    13561 taattttgat gaatcatctc gtcgaaagta gtggaaaagg tattatcgcc aaattttatc
    13621 tatttctaat ggtttctaat tggcagtttg cagtagaaaa aaatattaga ttactagcta
    13681 aaagtatctt agtgaagaaa actaagatat tttttatttt cgattgtatt ttttgtttgg
    13741 gaaacccgat tttgtgtttg atcagtaaac acagtcgaaa agaatgttca tatggatgaa
    13801 tggtggctga ttagaataat taaatatatc gaaattgtgt ccaaagctgg tcacttgaca
    13861 actaaaaagg aacatttttt tgataattgt cctcaagtaa gtaaatctaa acaacatgga
    13921 aaattagctt tggatactat ttttgatgct atgttcttaa tggttgaaag cgctataaat
    13981 ggcgttttta taagctataa ttgatattgg ataacagttc caactacata atatagcgag
    14041 gtgaaaacga tgaatttctt tctacaatta ttaggtaact tctctggagg tttaaatttc
    14101 ccagacgtaa cagaagtact aaacaactta atcaaagcaa tttttggttg atttcaaaaa
    14161 aataaaacgt aaaggaggct actacaagtg aattttttct tacaattatt aggtaatttt
    14221 tctggagcga ttaactttcc agacgtaaca gaagtactaa acaatctaat caaagggatt
    14281 tttggttgat cctaagaaca taaatcagta aaggaggcta ctacaaatga attttttctt
    14341 gcaattgtta ggtaattttt caggtgcaat ccgctttccg gacgtagcag aagtactaaa
    14401 caacttaatc aaaggtatct ttggttaatt gccaattaga ataagttgaa atatagggtt
    14461 aaggctaact taaccctatt ttctaattaa agatgtaaat aaggaggatt ttaaatccat
    14521 gaaaaaaata atcgcgttaa tcacagcagt tgcacttcta tcaatgattg gatttgcctt
    14581 tatccctggt actgttgcga atgcagcgaa ttcatcagaa agcagtttaa catacaaaga
    14641 tgtacgcagt ggattttact ttgttggtta tgaaaatgta caacttgaaa caggaaaaac
    14701 atacaagtac acagtagcgt atgaagcaaa tgttgatatg aaaatgacag atactattac
    14761 aggacaatca gcaaaagcag gactttttac accaaaatca tccggtgccg agctgaacac
    14821 tagttacgta agccgaacaa agaataacgt tatagacgta gctgatgcag gtaataaggt
    14881 ttttaaacac acatttgaat ttacagcgaa ggaaaataca aaagcagata tcggtgtttt
    14941 cttaggagca ggttctgttc ttccaacaac tccagaaacc acgtcccttt ggaaaaacgt
    15001 aaccgtgaca aatgaaactc cactagtata agcggaggct ccagttatta gtgcagaaga
    15061 taaaactatc aatcaaaatg aaagttttaa tccactaaat gaagtcactg cgtcagacga
    15121 aaaagacggt gatattacaa aggacatcca cgtaaccaaa aatacggtag atacgactaa
    15181 gagtggcaaa tatgatgtgg attatagcgt tacaaattca agcaacttaa caacgacaaa
    15241 aagtattaaa gtaaccgtaa ccccagcagc aataagcaaa aatacagccc cagttattaa
    15301 tgcaaaagat caaacaatca aagttggaga tgtgtttaat gtgttaaaag gagttactgc
    15361 gaaagataac gaagatggtg atttaacagc aaaaatcaaa gtgaccaagg atacagtgaa
    15421 taattcgaaa aaaggtgttt atcaagttac atatactgtg acagattctg gcaatctatc
    15481 agcttcactt acaattaaag tgactgtaac tcaagatgga aaactaatag taaatccaag
    15541 tgatccaaca aagccatcta tcacaaaaac acctgtggaa ccaacaaaaa ttgaaaaaga
    15601 tcctgaaaat agagcgactt ccgttttgaa agcaagtaaa ataccaaaaa ctggtgatag
    15661 ttcaatgata tggctagtat ttgtcggact cggcttaaca gctattggta ttagttctta
    15721 tcaaaaaaaa gcaaataaat aatgcatact ggatgaaaag agtattttag attagatact
    15781 cttttcatta actagatggt aaaatggcat tctaaagctg tttttaaaca gctttataga
    15841 gagagagggg aatcatttat gccaaaaatt gctaaaggta atcgactcga gaatgttgct
    15901 tttgagtaca ttaagaacaa aatcacaact ggggagtatc caacgggtta tcgtgttgta
    15961 gaagcaaagt tatctcaaga actaaatatg agtaggacac caattaggcg agcgattatc
    16021 aacctttgcc attctggatt tttagtccac caatataatc ggggtgcttt tgttcaaaac
    16081 actgaagtaa ctattacaga atttttttcg cgaatgaaat tagtcgaact attgatgtat
    16141 gaaagtacag aaaaattaat tc
//
LOCUS       DASDYK010000054        15897 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.054, whole genome shotgun sequence.
ACCESSION   DASDYK010000054 DASDYK010000000
VERSION     DASDYK010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15897
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.054"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            257..1363
                     /gene="qoxA"
                     /locus_tag="U0308_001719"
     CDS             257..1363
                     /gene="qoxA"
                     /locus_tag="U0308_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit II"
                     /protein_id="HEM2316682.1"
                     /translation="MSKVLKSLLLTALLGVTGLISGCGDLTVLNPKGPVAKGQSDLII
                     YSIIFMLVIVLTIFVLFTIMLVKYRERKDISNYEPDMHGSKKLEIFWTLIPVAIVIAL
                     AIPTVKTIYAGEEAPKVTSHKDPIVIYATSADWKWIFSYPDESIETVNYVNIPTDRPV
                     LFKLTSADTMTSFWVPQLGGQKYAMSGMTMNLYLQADEVGTYKGRNANFNGEGFADQR
                     FDVVAQSEKDFKKWAKETKASSPVITQDIYDRLLIPGSSKKKTYSGTHLAFVDVAADP
                     EYVFYAYKRFGYEMTNPHNPNTKSTISDEPMLPVRPVTVTNPQFERHDMKPQIIKNGE
                     GYHEDKHREDEMKKMEEDIQTNEFNKKESDDAGK"
     gene            1382..3361
                     /gene="qoxB"
                     /locus_tag="U0308_001720"
     CDS             1382..3361
                     /gene="qoxB"
                     /locus_tag="U0308_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit I"
                     /protein_id="HEM2316683.1"
                     /translation="MKWNEFIVTGDPMILGAQISIVLVSIGVVALLTYTKKWKWLMKE
                     WISSVDHKKIGIMYLLAAVLMFFRGGVDALMMRTQLALPDMKFLDAQHYNEVFSTHGT
                     IMILFMAMPFIIGLMNIAVPLQIGARDVAFPFLNNLSFWTFFMGAMLFNLSFVIGGSP
                     DAGWTNYAPLATDFSAGYGINFYLLGVQIAGIGTLMTGINFFVTILRMRTKGMTLMKM
                     PMFTWSSLITSLIIIFAFPVLTVALALMSFDRLFGTAFFTLTNGGLPMMWANLFWVWG
                     HPEVYIVILPAFGIFSEIISTFSRKKLFGYPAMVAAMAVISLLSFLVWVHHFFTMGSG
                     ALVNSFFSITTMMIAIPTGIKIFNWLFTMYKGRITFTTPMLWSLAFIPNFVVGGVTGV
                     MLAMAAADYQYHNTYFLVSHFHYVLIAGTVFSCFAGLTYWYPKMVGYRLNEKIGKWFF
                     WIFVVGFNVCFFPQYFLGLDGMPRRIYTYVQGDGWTTLNFISTVGGFLMGVAFLVLCY
                     NIYYSYKNSKREVTGDPWDARTLEWATSSAVPPKYNFAVLPEWNDLDDFWNRKQKGDP
                     YVNDKNYKPIHMPSNTMVGFVMSVFFFIAGFGLVFYWYWMGIIGLVGILGCMIYRSFQ
                     NNDGYHVEVDEIKATEEHNARELATGVKEGNPWNL"
     gene            3349..3960
                     /gene="qoxC"
                     /locus_tag="U0308_001721"
     CDS             3349..3960
                     /gene="qoxC"
                     /locus_tag="U0308_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit III"
                     /protein_id="HEM2316684.1"
                     /translation="MESVETNKNLPIEYRSEQGRLNILGFWIFLGAEIALFATLFATY
                     FVMRKAGSNAGHPPAEMFELWLVLIMTFLLLTSSFTCGLAIGEMRKGNVKMLTIYSII
                     TLILGAGFVGFELYEFAHYVTEGVTMQIGSYWSAFFVLLGTHGLHVTVGIFWISFILI
                     QIKMHGLTPKTASKVFISSLYWHFLDVVWIFIFTGVYLLGMVN"
     gene            3962..4294
                     /gene="qoxD"
                     /locus_tag="U0308_001722"
     CDS             3962..4294
                     /gene="qoxD"
                     /locus_tag="U0308_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit IV"
                     /protein_id="HEM2316685.1"
                     /translation="MTQNNKSNAAHAEGGIPWKHIVGFALSVILTLLAVWVALYSTLT
                     TNVKVVIIFIFAFIQAALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVME
                     IGHMNHLL"
     gene            complement(4346..5464)
                     /locus_tag="U0308_001723"
     CDS             complement(4346..5464)
                     /locus_tag="U0308_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEM2316686.1"
                     /translation="MKSRKKGIILVLSIIIIFSIGLLVNNIMTNNKDTAKQKKKTVAA
                     VKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLAEKGMDYPFNNVREELKSSDYTFVD
                     LETAITTRTKKVPYQEFWIKSDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAA
                     LRANNLAYVGAGKNEDEAYQLKVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGY
                     DINLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNTPVDYQTQYVKKLVDDHLVDAIVA
                     SHPHWLQSFEVYKDVPIAYSLGNFLFPDYVSGHSAETGIYKLNFNQGKVTAHFDPGII
                     SGNQINMLDGSAKTAQLNYLQSISPNATINSNGDISAK"
     gene            5690..7123
                     /gene="ascB"
                     /locus_tag="U0308_001724"
     CDS             5690..7123
                     /gene="ascB"
                     /locus_tag="U0308_001724"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEM2316687.1"
                     /translation="MTESKFPKDFLWGGAVAANQCEGAYLEDGKGLSLVDILPTVEDG
                     RWEALFNPSKALATDYGFYPSHESIDFYHRYKEDIKLMAEMGFKCFRMSISWPRIFPN
                     GDETTPNEKGLAFYDAVFDECHKYGIEPVVTINHFDTPLEVFKKYGGWKNRKCIDFYL
                     NFCEAIFTRYKDKVKYWMTFNEINMILHLPYIGGGLDVTKEDNPEEVKYQAAHHQLVA
                     SALATKLGHEINPENQIGCMLAAGNTYPMTCNPKDVWKSIEADREGYFFIDVQARGYY
                     PSYTKRFFKEHNINIKMEDGDLDVLRDHTVDYVAFSYYSSRLTSADPEKNKETEGNVF
                     ATLKNPYLKASEWGWQIDPLGLRITMNTIYDRYQKPLFIVENGLGAVDTVAEDGSITD
                     DYRIDYMREHVREMGEAIEDGVELLGYTPWGCIDLVSAGSGEMKKRYGFIYVDRDNKG
                     NGTLNRSKKKSFDWYKKVIETNGKDID"
     gene            complement(7170..7991)
                     /locus_tag="U0308_001725"
     CDS             complement(7170..7991)
                     /locus_tag="U0308_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEM2316688.1"
                     /translation="MGNSFSKWGKWILVLGLMFSVFSVSTAGQAAAKETVINKQMVTT
                     ASLNVRSTNSTSGKVIGWLKSNTKFKAIAKTSNNWYRFSLKGKNGYVSGKYVKAATAA
                     PAPKPSTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHKS
                     NPNYGFVGNPFSKSGWTIYPPALVNQVKKYTGSAKNMTGTNLAGIKNQLNKKRPVVAW
                     VSNFHGFSVHAITITGYDKNNFYYNDSWSGQKNARISQSYFNTCWSKQAKRAISY"
     gene            8232..8972
                     /locus_tag="U0308_001726"
     CDS             8232..8972
                     /locus_tag="U0308_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2316689.1"
                     /translation="MAEPKYAIIINDIKRLISDGTFKPGEKIYSEDELKKKYNVSNTT
                     VVRALHELVRAGILARYQGKGTYVSKSIINEEVIFNEYTTVPNGRFNRKTKITNEHTK
                     VVAINEIQDARIAKKLQIPPENMIVHFQRIRLIDDVPWTVQNNYMAKSNLINVDLTNF
                     ERFNSLSEVIKELYGINILHEAMKERIEVEFPVKDKNNFKLLEIDSELPLYHIERITY
                     VPEGQPYEYIESYLRHNFYSIEIEKKKQ"
     gene            8988..9389
                     /locus_tag="U0308_001727"
     CDS             8988..9389
                     /locus_tag="U0308_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2316690.1"
                     /translation="MNFIIAAHGRYAQEVKNSCQMITGQTTNISAITFTEEMGVTDVL
                     DAYTAVYSPVNETAIIVDIVGGTPCNAAQMFSTKHPEVKVVSGLSLGLLIPLSLGESL
                     EEAMLGAKENIQFVEQKASYTIVSDDGEEED"
     gene            9389..9877
                     /locus_tag="U0308_001728"
     CDS             9389..9877
                     /locus_tag="U0308_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2316691.1"
                     /translation="MGSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNE
                     MEKVALKTAVPAGVKLSILTVKGAANNINNDKYAGQQVFLIVKSPHALRGLVDAGVEL
                     PQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLSQKGIKITAQMVPSEDAVEFASLL
                     KK"
     gene            9900..10703
                     /locus_tag="U0308_001729"
     CDS             9900..10703
                     /locus_tag="U0308_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS
                     mannose/fructose/sorbose/N-acetylgalactosamine transporter
                     subunit IIC"
                     /protein_id="HEM2316692.1"
                     /translation="MDLAVWQIILLVILAACTILDALTLVIGLNFPVITGTLAGIIMG
                     DMVLGLAIGATLQLMVLGVGTYGGASIPDFTTGAIVGTVFAVLSGQDAEFAIGLAIPV
                     GLLMVQLDILARFTNTFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLT
                     FGQSVVDFILNEIPEWLMGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAY
                     LKVPMLGVALIGVALAIIYFKQNFKNPVAAGANGAALVGEENEDGEYED"
     gene            10678..11505
                     /locus_tag="U0308_001730"
     CDS             10678..11505
                     /locus_tag="U0308_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HEM2316693.1"
                     /translation="MKMANTKTEQDFEKVLKRRDLIAANFRWLFASQICWNYERMMST
                     GYLYSILPTLRKLYKTDDDLKDMMNMHNQFFNTNPMVGGLILGMDMAIEEREKKASKE
                     VVTGLKTGLMGPFAGVGDTIFGVILPTIFGSIAAYMGLQGNVTGVVIWVLVNILVVGA
                     RFTLLPLGYKQGAKLVTEFADRLNALTDAAILLGVTVVGALIPTVIKATVPFVYKSGK
                     VELKMQDMLDQIMPSLVPVLLVALIYALLGHKKMTSTKAILLVMVIAIILFNLKILG"
     gene            11533..12237
                     /locus_tag="U0308_001731"
     CDS             11533..12237
                     /locus_tag="U0308_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar isomerase domain-containing protein"
                     /protein_id="HEM2316694.1"
                     /translation="MGLTFFDKARELTEELEKTQAESIHQAAKLVADSIMNDGIIQAF
                     GSGHSYAAAIEVCGRAGGLIPSKVIMDPAGGYYESIEGVGSLLTHRLQAKPNDIFFLI
                     SNSGRNPMGIELAEWIKSQGCKLIVVTALDASQTAASRHSSGKLLYEFADVILDNRSV
                     QGDAALELDGLEGKVCGTSSFSAVLLLQQTIYEAVELMLEKGYTPPVYRSANIDGGYE
                     YNFAIEDKFADRIFHF"
     gene            12292..12933
                     /locus_tag="U0308_001732"
     CDS             12292..12933
                     /locus_tag="U0308_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HEM2316695.1"
                     /translation="MILKEACIENTTNLVNVIEAGANRVELCDNLAEGGTSVSYGIAK
                     HVVKICHEQNVSVMAMVRPRKGNFVYTKEEISVMIDDILMYKKIAVDGVVFGCITDSG
                     LLDKPAIIELLKAAAGLEVTFHMAFDELVDSEKLPAIDWLAEQGVTRILTHGGDGAKL
                     PEETFIQWRKYIDYAAGRIIILPGGGIKSHNMEWITKETGAAEIHGTDLFGER"
     gene            13138..15042
                     /locus_tag="U0308_001733"
     CDS             13138..15042
                     /locus_tag="U0308_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HEM2316696.1"
                     /translation="MKYEQLAKDILKNVGGKENINSVFHCITRLRFKLKDENIANTKE
                     IEKLDGVISVIKSGGQYQVVIGNHVPDVFKAVLEVGGISAEGDEGSSAPATGNIFNRF
                     IDMISGVFTPVLGVLAATGMIKGFTAMFVAFGWITVTSGTYQLLYAIGDCLFYFFPIF
                     LGYTAMKKFGGNIFIGMAIGGALVYPTLAGITAGDPLYTLFAGTIFESPIHVTFLGIP
                     VILMSYASSVIPIIVATYFGSKVEKGFKKIIPDVIKTFVVPFCTLLIVVPITFIVIGP
                     IATWAGQLLGAGTIWVYNLSPIIAGLILGGFWQVFVIFGLHWGLVPVAINNLTVLGHD
                     PILAMTFGASFAQIGAVLAVFFKSRNKKIKSLSIPAFISGIFGVTEPAIYGVTLPLKK
                     PFIMSCIAGGIGGGIIGFAGSQTYIMGGLGIFGLPNFFKPGSGISGEFWWVVIAIVIS
                     FILGFILTYVVGFKDPADVVVEQSNTVEGETLIERETIPAPVVGEIVTLADVKDEAFS
                     SGALGKGVAIIPTVGRVVAPAAGTVTTIFPTGHAIGITTKDGAEVLIHIGMDTVQLEG
                     KFFTAHVKQGDVIEKGQLLTEFDIEGIKAAGYDVTTPVVVTNSNQYLDVMITDAKEAK
                     LEERLITLVI"
     gene            15124..>15897
                     /locus_tag="U0308_001734"
     CDS             15124..>15897
                     /locus_tag="U0308_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEM2316697.1"
                     /translation="MLAKGDLIGIICCSDGRKKEDEKDLKRLKQALEKEFGLQVVFAK
                     TIFQIDDSPFSGTPEERAAELMKLYQNMDVKMIFDISGGDAANQVLPYLNFNIIKKAA
                     KPFIGYSDLTVILNAIFAKTKQPGFNYLLRNLAGEASEIQRVQFQKTFFENQIAINGK
                     SLNEFEWSLGEIVGGNIRCFLKLAGTEFMPDVSNKIILLESLGGKEAKIASYVAQLEQ
                     LGVFSKCLGIVVGEHTEAEKNGEYDRIGILYQQIGLKYKL"
BASE COUNT         4950 a         2737 c         3338 g         4872 t
ORIGIN      
        1 gtgaaatatt taatatatca ggtttttgaa ctaagatatc aaatcagata taatgagtta
       61 gagtatgaac atagtgattc taaaaatgct gattaatttt taaaaaagtt tgtgagtttt
      121 tttaaaagaa ctaaatagta aaagcatttt ttcagttaca taggagttct aacaagcttc
      181 tttcagcact ccggtaatgg tatttttgcg caaaaataca cattagaaaa catcaaaagg
      241 aaaagagggg attcgggtgt caaaggtact taaatctttg ctgcttacgg cactacttgg
      301 ggttaccggc cttataagtg gttgtggtga cttgacggta cttaatccaa aagggccagt
      361 tgcaaaaggt cagtcggact taattattta ttcgattata tttatgctgg ttattgtttt
      421 gacgattttt gtattgttta cgattatgtt ggttaaatac cgcgaacgga aagacatttc
      481 aaactatgag ccggatatgc acggtagtaa aaaactggaa attttttgga cattgattcc
      541 agttgcaatc gttattgctc tagctattcc gactgtaaaa acaatttatg caggggaaga
      601 agcaccaaaa gtgacttcgc ataaagatcc aattgttatt tacgcaacaa gtgcagactg
      661 gaaatggatt tttagttatc cagatgagtc aattgaaaca gtcaactatg taaatattcc
      721 aaccgaccgt cctgtactat tcaaattaac ttctgcagat acgatgacaa gcttttgggt
      781 tccgcaatta ggtggacaaa aatatgcgat gtctggcatg acgatgaatt tatatttaca
      841 agcagatgaa gttggtacgt ataaagggcg taacgcaaat ttcaacggcg aaggttttgc
      901 ggatcaacgc tttgatgtag tagctcaatc tgaaaaagat ttcaaaaaat gggcgaaaga
      961 aacaaaagca agctcgccag ttattacaca agacatatat gatcgtcttt taattcctgg
     1021 aagctctaag aaaaagactt attctggtac gcatttagca tttgttgatg tagcagctga
     1081 tccagagtat gttttctatg cctacaaacg ttttggttat gagatgacaa atccgcataa
     1141 tccaaacaca aaatcaacca tttctgatga accaatgctt ccggttcgtc ctgtgacagt
     1201 aactaatccg caatttgagc gtcatgatat gaagccacaa attattaaaa acggcgaagg
     1261 ttaccacgag gataaacacc gcgaagatga aatgaagaaa atggaagaag acatccaaac
     1321 aaatgaattc aataaaaaag aatcggatga cgcagggaag taaaaagggg ggacataagg
     1381 catgaaatgg aatgagttta tcgtaactgg cgacccaatg attttaggcg cgcagatttc
     1441 tatcgtactt gtaagtattg gtgttgttgc gttactaact tatacaaaaa aatggaagtg
     1501 gctcatgaaa gagtggattt cttccgttga tcataaaaaa attggtatta tgtacttgct
     1561 tgctgctgtc ttaatgtttt tccgtggtgg tgtggatgcg ctaatgatgc gtacccagct
     1621 cgctttaccg gatatgaaat ttttagacgc acagcattac aatgaagttt tttctacaca
     1681 tggaacgatt atgattttat ttatggcgat gccgtttatc atcggattga tgaacattgc
     1741 cgtaccactt caaattggtg cgcgtgatgt agcatttcca tttttaaaca acttaagttt
     1801 ttggacgttc tttatgggag cgatgctatt taacttatca ttcgtaattg gtggttcgcc
     1861 agatgctggt tggacaaact atgcgccact tgcgacagat tttagcgctg gatatggaat
     1921 taacttctat cttctaggtg ttcaaatcgc tggtattggt acgctgatga cggggattaa
     1981 ctttttcgtc acgattttaa gaatgcgtac aaaaggtatg acgttaatga aaatgccaat
     2041 gtttacttgg tcttcattaa ttacaagttt gatcattatt ttcgctttcc cagttttaac
     2101 agtggcactt gctttgatgt catttgaccg actgtttggg acagcattct tcacactcac
     2161 gaatggcggg ctcccaatga tgtgggccaa cttgttctgg gtttggggtc atccggaagt
     2221 atatattgtt attttgccag ctttcggtat tttctcagag attatttcta ctttctcgag
     2281 gaaaaaatta ttcggttatc cggcgatggt tgccgcgatg gcagttattt ctttactaag
     2341 tttcctagtt tgggtccatc acttctttac aatgggatca ggggcgcttg ttaactcctt
     2401 cttctccatt acaacgatga tgattgcgat accgaccggg attaagatat tcaactggct
     2461 ctttacgatg tacaaagggc gaataacctt tacaacgcca atgctttggt cgcttgcctt
     2521 tatccctaac tttgttgttg gtggggtaac tggggttatg cttgcgatgg ctgcagccga
     2581 ttatcaatat cacaatacgt acttcttagt atcccatttc cactacgtat taattgctgg
     2641 aactgtgttc tcctgctttg ccgggcttac atactggtat ccaaaaatgg tcggttacag
     2701 actaaatgaa aaaattggta aatggttctt ctggattttc gttgttggat ttaacgtttg
     2761 tttcttcccg caatatttcc taggactaga tggtatgccg cgtcgtattt acacttacgt
     2821 acaaggtgat ggctggacaa cgcttaactt tatctctact gtgggcggat tcttgatggg
     2881 tgtagcattc ttagttcttt gctacaacat ctactacagc tacaaaaact ctaaacgtga
     2941 agttactggt gacccgtggg atgctcgtac gcttgaatgg gctacaagtt ccgctgttcc
     3001 tccaaaatat aactttgctg ttttacctga atggaatgac ttggatgatt tctggaatag
     3061 aaaacaaaaa ggcgatccat atgtaaatga taaaaattat aaaccaatcc atatgccaag
     3121 taataccatg gttgggtttg taatgtctgt cttcttcttc attgcaggtt tcggactagt
     3181 cttctactgg tactggatgg gaattattgg cctagttggt attttaggat gtatgattta
     3241 tcgttcattc caaaataacg atggttacca cgttgaagtg gacgaaatta aagcaacaga
     3301 agaacataat gcgcgcgaac ttgcgactgg tgtgaaggag ggtaacccat ggaatctgta
     3361 gaaacaaata aaaatctgcc aattgaatat agatcagaac aaggtcgatt aaatattctt
     3421 ggattctgga ttttccttgg cgccgaaatt gcattgtttg caacgctttt tgcgacttac
     3481 tttgttatga gaaaggctgg ctcgaatgcg ggtcatccgc cagcagaaat gttcgaactt
     3541 tggctagtgc taataatgac atttttactt ttaacaagta gttttacgtg tggtttagca
     3601 attggtgaga tgcgtaaagg caatgtgaaa atgttgacga tttactcgat tatcacatta
     3661 attcttggtg cgggatttgt tggctttgag ctttatgaat ttgcacacta tgtgacagaa
     3721 ggcgttacaa tgcaaatcgg ttcttactgg tcggcattct tcgttctact aggaacacat
     3781 ggacttcacg taacggtcgg gattttctgg attagtttta ttctgattca aattaaaatg
     3841 catggtttga cgccaaaaac agcatcaaaa gtatttattt ccagtttata ctggcatttc
     3901 ttggatgttg tgtggatttt cattttcacc ggtgtctatt tgctagggat ggtgaactaa
     3961 tatgacacaa aataataaat caaatgcagc tcatgctgaa ggtggcattc cttggaaaca
     4021 tattgttggc tttgcgttat cagttatttt gacgcttcta gcagtctggg tggctcttta
     4081 ttcgacgcta acaacaaatg ttaaggtagt tattattttc atctttgcgt tcattcaggc
     4141 agccctacag cttctgatgt tcatgcatat gacagaaggc cgcgatggta aaattcaaat
     4201 cggtaatatt ttattcgccg catttatcgc gattgtcgta gttattggtt cttattgggt
     4261 aatggaaatt ggccatatga atcatttgtt ataaaaaata agctgatgct tagaacggtt
     4321 aaaaccgaac tagcatcagc tttttttatt ttgcggatat atcaccatta ctattaatag
     4381 ttgcatttgg agaaatggat tggagataat ttaattgtgc tgtcttggca gaaccgtcaa
     4441 gcatattaat ttgattacct gaaataatac caggatcaaa atgcgcagtc actttacctt
     4501 gattaaaatt cagtttataa atacctgttt ctgctgaatg accagaaaca tagtcaggaa
     4561 acaagaaatt acctaatgaa taagcaattg gaacatcttt gtatacctca aaactttgga
     4621 gccagtgtgg atggctagca acaatcgcgt caactaaatg atcatccacg agttttttaa
     4681 cgtattgggt ttgataatct acaggtgtat tcgtcttttc aactccccag tgaaaataga
     4741 cgaccatata atcaatatct ttattttttg cgcgttcttc tttgattttt tcttcgacta
     4801 aatttatatc ataaccatta gtaaccccag gagtatcttc atcggcaatc caaccagtat
     4861 ttgggaaaaa gtggcaaaac gacatgaatc caactttatt acctttgatg tcagcaactt
     4921 taagttgata ggcttcatct tcatttttac cggcgccaac ataggctagg ttattggcgc
     4981 gtaaagcagc cgttgtgtcg agtaatccat cttcgtaata gtctaaaatg tggttattac
     5041 taatattaac catatcaacc cctgcatttt taagagctgt taaagaacta ggatcacttt
     5101 taatccaaaa ttcttggtag gggacttttt ttgttcgagt tgtaatagct gtttctaaat
     5161 caacaaatgt atagtcgctt gatttcaatt cctcgcgaac attattaaaa ggataatcca
     5221 ttcccttctc tgctaaaacg gggcgtaaat cccaatcaaa cataatatca cctgtaaaat
     5281 caatgttaaa tggttctttt ggttttggag gtgtttcttt tttcttttta acagcagcga
     5341 cggttttctt tttttgttta gcggtatctt tgttatttgt catgatgttg ttcactaata
     5401 aaccgatgga aaaaattata ataatagaca gtaccaagat aatccctttt tttcttgatt
     5461 tcattttttc tcctcctaaa ttaaaaagtt atctaattct atcagtatgg agaaaagggt
     5521 ttttatcaaa aataggcttt tttttggatt ttaatggcta aattgtgaac tttaaaatca
     5581 taaaatggaa aatgaattta aaaaatttga aattattgct tgctatgtaa tgcattacat
     5641 attctatagt ggaaaagtaa attatattcg tgagaggaga tatacaaaaa tgacagaatc
     5701 aaaatttcct aaagactttt tatggggcgg agcagttgct gccaaccaat gtgaaggagc
     5761 ttatcttgaa gacggtaaag gactttcact tgttgatatc cttccaacag tagaggacgg
     5821 acgttgggaa gctttattca atccatcgaa agcgcttgct acagattatg gtttttaccc
     5881 aagtcacgaa tcaattgatt tttatcatcg ttataaagaa gacattaaat taatggctga
     5941 aatgggattc aaatgtttcc gtatgtccat cagttggcca cgtattttcc cgaatggtga
     6001 tgaaacgaca ccaaatgaaa aaggtttagc attttatgat gcagtttttg atgaatgtca
     6061 caaatatggt atcgaaccag ttgttacaat caaccatttt gatactccgc tagaagtttt
     6121 caaaaaatat ggtggttgga aaaatcgtaa atgcatcgac ttttacttga atttctgtga
     6181 agcaattttc acgcgttata aagataaagt aaaatattgg atgacattta atgaaattaa
     6241 catgattctt catcttccat acattggtgg aggtttagac gttactaaag aggataatcc
     6301 agaggaagtt aaatatcaag ctgctcatca tcaattagtt gcatcagcac ttgcaactaa
     6361 acttggtcat gaaatcaatc ctgaaaatca aatcggttgt atgcttgcag cgggtaacac
     6421 atatccaatg acttgtaatc caaaagatgt ctggaagtct atcgaggcgg accgtgaagg
     6481 ctacttcttc attgatgttc aagcacgcgg atactaccca agctacacta agcgtttctt
     6541 caaagaacac aacatcaaca tcaaaatgga agatggcgat ttagacgtat tacgcgatca
     6601 cacagttgat tacgtggcat tcagctacta ttcttctcgt ctaacaagcg cagatccaga
     6661 gaaaaacaaa gaaacagaag gcaacgtttt cgcaacacta aaaaacccat acctaaaagc
     6721 aagcgaatgg ggttggcaaa ttgatccact aggtctacgt attactatga atacaattta
     6781 cgaccgttat caaaaacctc ttttcatcgt tgaaaatggc ttaggtgcag tggatactgt
     6841 ggcagaagac ggctcaatca ctgatgatta cagaatcgac tacatgcgtg aacacgttcg
     6901 cgaaatgggc gaagcaattg aggatggcgt ggaacttctt ggttatacac catggggctg
     6961 catcgacctt gtcagcgctg gctctggcga aatgaaaaaa cgctacggct tcatctacgt
     7021 tgaccgcgat aataaaggca acggaaccct aaaccgctcg aagaaaaaat cattcgactg
     7081 gtacaaaaaa gtaattgaaa caaatggtaa agatatcgac taatatatca gaaatcccca
     7141 ctttcatcat cgaaagtggg gattttattt taatatgaaa tcgcgcgttt tgcttgtttg
     7201 ctccaacaag tattaaaata actttgcgaa attcgtgcat ttttttgacc ggaccagctg
     7261 tcgttatagt aaaaattatt tttatcataa cctgtaatag taatcgcatg aacggaaaaa
     7321 ccatggaaat tactaaccca agctacaact ggacgttttt tattcaactg atttttaata
     7381 ccagctaaat ttgttccagt catattcttc gcgctcccag tatatttttt aacttgatta
     7441 actaaagccg gtggataaat cgtccagcca ctcttagaga atggatttcc aacaaaacca
     7501 taattcggat tggatttatg acgtttcatt tctttggcaa gtttgacttt atcgacattt
     7561 ttcccagcgt agcgcagcat catcgcaatg tttgtaatct cgcagccagt tggcaattgt
     7621 ggacgctgaa cgattaaagg cacattcatt tgcacaattt ttggcgttga aggttttggt
     7681 gccggcgcgg cagttgcggc cttgacgtat ttcccagata cgtagccatt ttttcctttc
     7741 aaactaaatc gataccagtt attcgatgtt ttagcaatcg ctttgaactt tgtattgctc
     7801 ttaagccaac caataacttt cccagaagtc gaattagttg aacgaacatt taggcttgca
     7861 gttgttacca tttgcttgtt aatcacagtc tcttttgccg ccgcctgacc agctgtagaa
     7921 acactaaaaa cgctgaacat taacccaagg acaagtatcc atttccccca tttactaaaa
     7981 gaattcccca ttatatcccc ctttgataca gattacttat gtatacccta ttttggaaaa
     8041 ataaaaagaa aacgcttgca taaatgaaat ggccgtggta ctataaaaat gaacttaacg
     8101 tgttaaccgg ttattaattt aaagttcagt gatagcaggc taattcaagt ttgcaatcaa
     8161 aaaattatca tggtaccatt aacctaaaac ttaacgtgtt aacgcgcggg atgctttagg
     8221 gggaatttgt tatggcggaa ccaaagtacg ctattattat caatgatatc aagcgattaa
     8281 ttagtgacgg aacttttaag ccaggggaaa aaatttattc ggaagatgaa ctgaaaaaga
     8341 aatacaatgt tagtaatacg acagttgttc gagcattaca tgaattagta cgagctggga
     8401 ttttagctcg ttatcaagga aaaggcacat acgtgagtaa gtctattatt aacgaagaag
     8461 ttatttttaa tgaatatacg acagtgccga acggaagatt caatcgtaaa acaaaaatta
     8521 ctaacgaaca tacaaaagta gttgcaataa atgaaattca ggatgcgcga attgctaaaa
     8581 aattgcagat tccccctgaa aatatgattg ttcattttca acgaatccgc cttattgatg
     8641 atgtgccttg gaccgtacaa aataactata tggcaaaatc caatttgatc aacgtagatt
     8701 taaccaattt cgaaagattt aattctttat ctgaagtaat taaagagctt tatggtatta
     8761 atattctgca cgaagcgatg aaggagcgaa ttgaagtcga atttccagta aaagacaaaa
     8821 ataattttaa attactcgaa attgactccg aattaccgct ttatcacatt gaaagaataa
     8881 cctatgtgcc agaggggcaa ccctatgaat atattgaaag ctacttgcgg cataattttt
     8941 actctattga aattgaaaag aaaaaacaat agaagggagt taattacttg aattttatta
     9001 tcgcagcaca tggccggtac gcacaggaag tgaaaaatag ctgtcagatg attactggcc
     9061 aaacaactaa tatctcagca attactttta ccgaagaaat gggggtgacg gatgtattag
     9121 acgcctacac ggccgtttat tcacctgtaa atgaaaccgc tatcatagtt gatattgttg
     9181 gtggaactcc gtgtaatgcg gctcaaatgt ttagtacaaa acatccagaa gttaaagttg
     9241 tatcaggttt gtcgctagga ttactcattc cacttagcct tggagaaagt ttagaggagg
     9301 cgatgcttgg agcaaaagaa aatattcaat ttgtagagca aaaagcgagt tatacgatag
     9361 taagtgatga tggggaggaa gaggactgat gggaagcaac ggaattaaac acgtacgcgt
     9421 agatgagaga ctaattcacg ggcaagtagc aacaatgtgg accaatacta taaaagcaac
     9481 gcgaatcatg attgttgacg atgcggttgt aaaaaatgaa atggaaaaag ttgccttaaa
     9541 aaccgcagta ccggctggtg tcaaactaag cattctgacc gtaaaaggtg cagcaaataa
     9601 tatcaataat gataaatacg cagggcagca agttttctta atcgtaaaat cacctcatgc
     9661 tcttcgcggt ttagtagatg cgggggtaga acttccccaa atcaatgttg gaaatatgtc
     9721 gactaaagca gggagccgac aaatcaaaaa atcagttagc gtgacggatg aaaatttgga
     9781 agatttcgat tacttgtctc aaaaaggcat taaaatcact gcccaaatgg ttccgagtga
     9841 agatgcggtt gaatttgcaa gtttattaaa aaaataagtg ataagaaggg agaactacaa
     9901 tggatttagc agtttggcag attatattgt tagttatact cgcagcttgt accattcttg
     9961 atgctttaac tttagtaata ggacttaatt tccctgtaat aacaggaacg cttgctggaa
    10021 tcattatggg tgacatggtg ctcggacttg cgattggggc aactttacag ctgatggttc
    10081 taggtgttgg tacatacggc ggagcgtcga ttcctgactt tacaacggga gcaatcgtcg
    10141 gcacagtatt tgccgtttta tcaggtcagg atgcggaatt tgcgattgga cttgcaattc
    10201 cagtgggact tttaatggtt caattagaca ttttagcaag atttacgaat acatttttct
    10261 tgcaccgcat tgattctaat attgcttcgg gcaacatttc ggcggttaaa aggaacattt
    10321 ggtatggggc gctaccatgg gctttatcac gcgcggttcc cgtatttatc atgttgactt
    10381 tcggacaaag cgtggttgat tttattctaa atgaaattcc agagtggcta atgggcggcc
    10441 ttcgtgtagc tggtggaatt cttccggtag ttggtattgc gattctcctt cgttacttac
    10501 caacaaacaa attcgtcgct tatttaatta tcggatttgt agcagcggct tatctaaaag
    10561 taccgatgct aggcgtggca ctaattggcg tggctttggc aatcatttac tttaaacaaa
    10621 atttcaaaaa tccagtggct gccggagcaa atggcgcagc gctagttggg gaggagaatg
    10681 aagatggcga atacgaagac tgagcaggat tttgaaaaag tactcaagag acgcgattta
    10741 atagcagcaa actttcgttg gttgtttgcc agccaaatat gttggaacta tgagcgaatg
    10801 atgtcgactg gttatcttta tagtattttg ccaacgcttc ggaaacttta taaaacagac
    10861 gatgatttaa aagatatgat gaatatgcat aaccaatttt tcaatacgaa tcctatggtt
    10921 ggtggtttga tcttaggaat ggatatggcg attgaagagc gcgaaaagaa agcgtcaaaa
    10981 gaagtcgtaa ctggtttgaa aacgggtttg atgggaccat ttgctggtgt tggtgatacg
    11041 attttcgggg ttattttacc gacgattttt ggatcaattg ccgcatatat gggacttcaa
    11101 ggtaatgtga caggtgtggt tatctgggta ttagttaata ttttggttgt gggagcaaga
    11161 ttcaccttac ttcctctagg atataagcaa ggtgcaaaac tagtgacgga atttgcggac
    11221 agacttaacg cgttaaccga tgcagcgatt ctgctcgggg tcacggtcgt cggggcatta
    11281 ataccaaccg taatcaaagc aactgtccca ttcgtttata aatcaggaaa agtagagctc
    11341 aaaatgcaag acatgctcga tcaaatcatg ccatcactcg ttccagtttt actcgtggcg
    11401 ctaatctatg cacttttagg ccacaaaaaa atgacatcta cgaaggctat tttattagta
    11461 atggtcattg cgattatttt attcaaccta aaaattctag gttaaaatat aaaaattgga
    11521 ggaatagaca aaatgggttt aacatttttt gacaaagcgc gtgaattaac ggaggaacta
    11581 gaaaaaacac aggcggaaag tattcatcaa gcagcaaaac tggtggcaga cagcattatg
    11641 aacgacggaa ttattcaagc atttggtagt gggcactcat atgcggcagc tattgaagta
    11701 tgtgggagag caggaggact aattccatca aaagttatta tggacccagc tggcggttat
    11761 tatgaatcga ttgagggcgt tggttccttg cttactcata gattacaagc gaaaccgaat
    11821 gatatattct tccttatatc taattcagga cgcaatccaa tgggaattga gcttgcggaa
    11881 tggattaaat cacagggctg taaattaatt gttgtaacag cactcgatgc ctcacaaaca
    11941 gcagcttcaa gacactcttc tggaaaattg ttgtacgagt ttgcggatgt tattttagac
    12001 aatcgttcag tccaagggga tgcggcactt gaattagatg gattagaagg aaaagtttgc
    12061 ggaacctctt cattctcagc cgttctgctt ctccaacaaa caatctatga agcagtagaa
    12121 cttatgcttg aaaaaggcta tacaccacca gtttatcgta gtgcaaatat tgatggtggc
    12181 tatgaataca attttgcgat tgaagacaaa ttcgctgatc gtattttcca cttctaataa
    12241 aaacgagcgc gaaaatgaac attattttcg cgcttttttg gaggatagaa aatgatttta
    12301 aaagaagcct gtattgaaaa tacaactaat ctggtgaacg ttattgaagc tggagctaat
    12361 cgagtggagc tttgtgataa tctagcggag ggcggaactt ctgtaagtta cgggattgcg
    12421 aaacatgtgg tgaaaatttg tcatgaacaa aatgtaagtg taatggcaat ggtccgtccc
    12481 cgaaaaggca attttgttta tacaaaagaa gaaatttcag ttatgattga tgacattttg
    12541 atgtataaga aaatagcggt tgatggcgtg gtttttggct gtattacgga ttctggattg
    12601 ctagataaac cagccataat tgaattattg aaagccgcag caggtctgga agtcactttt
    12661 catatggcgt ttgatgagtt agtagactcg gaaaaattgc cggcaattga ctggttagct
    12721 gagcaaggcg ttacaagaat tctcacacac ggtggtgacg gcgctaaact tcccgaagaa
    12781 acttttattc aatggcgaaa atatattgat tacgcagcag gtcgaatcat tattttacca
    12841 ggtggaggaa ttaaatcgca caatatggaa tggattacaa aagaaacagg agcagctgaa
    12901 atacatggca ctgacttgtt tggggagcgc taaaactccc caaataaatt tatttaaaaa
    12961 aaaagcttgc aaccgttttc tttatatgat atatttatct catcacaaag gattgttacc
    13021 aattcattgg gcaaaaccta agctgatttg taggacacgt gtatgcgtgg agtcctcgaa
    13081 tgagcttagg tttttctttt tgcccaaaaa accaaaaaga ggaaggaagt cgtcaaaatg
    13141 aaatatgaac aattagcaaa agacatcttg aaaaatgtcg gcggtaaaga aaatatcaat
    13201 agtgttttcc attgtattac cagacttcgg tttaaactga aagatgagaa tattgcgaac
    13261 acaaaagaaa ttgaaaagct tgatggcgta atctctgtca ttaaaagtgg tggtcaatac
    13321 caagtagtta tcggtaacca cgtaccagat gtatttaaag cagtattaga agttggcggg
    13381 atttcagctg aaggtgacga aggaagtagt gcaccagcaa caggtaatat cttcaaccgc
    13441 ttcatcgata tgatttctgg cgtatttaca ccagttctag gtgtattagc cgcaacaggt
    13501 atgattaaag gtttcactgc catgtttgta gcatttggtt ggattacagt tacttcaggt
    13561 acgtaccaac tactttatgc aattggggat tgtttattct acttcttccc aatcttccta
    13621 ggttacacag caatgaaaaa attcggcgga aacatattta tcgggatggc tataggtggt
    13681 gccttagttt atccaacact tgcaggtatt acagcaggtg acccacttta tacacttttc
    13741 gcaggaacaa tttttgaatc tccaattcac gtaacattct taggaattcc agttatcttg
    13801 atgtcttatg catcttctgt tattccgatt atcgtagcaa catattttgg ttccaaagta
    13861 gaaaaaggct tcaagaaaat cattccagat gtaattaaaa ctttcgtagt tccattctgt
    13921 acattattaa tcgtagttcc aatcactttc atcgtaattg gcccaattgc tacatgggct
    13981 ggtcaattat taggagcagg aacaatttgg gtttataact taagtccaat tatcgcgggt
    14041 ctaattttag gtggtttctg gcaagtattt gttatctttg gacttcactg gggtcttgta
    14101 ccagtggcaa tcaacaactt aactgttctt ggacatgatc caattttagc aatgacattt
    14161 ggtgcatctt ttgctcaaat cggtgcagta ttagcagtat tctttaaatc tagaaacaaa
    14221 aaaatcaaat ctcttagtat cccagcattt atttccggta tctttggtgt aactgaacca
    14281 gcgatttacg gtgttacttt accactgaaa aaaccattca tcatgagctg tatcgctggt
    14341 ggtattggtg gcggaatcat tggttttgca gggtctcaaa catatatcat gggtggactt
    14401 ggaatcttcg gtcttcctaa cttcttcaaa ccaggtagcg gtatttcagg cgaattctgg
    14461 tgggtagtta tcgcaatcgt tatcagcttc atccttggtt tcatcttaac ttatgtagta
    14521 ggtttcaaag atccagctga tgtagtagta gaacaatcta acacagtaga aggcgaaact
    14581 ttaatcgaac gtgaaacaat tccagctcca gtagttggcg aaatcgtaac tttagcagac
    14641 gtaaaagacg aagcattttc atccggtgca cttggaaaag gtgttgcaat catcccaact
    14701 gttggacgtg tagtagctcc agcagcagga acagtaacaa ctatcttccc aactggtcat
    14761 gcaatcggta ttacaactaa agacggtgca gaagttttaa tccacatcgg tatggacacc
    14821 gttcaacttg aaggtaaatt cttcacagca cacgtgaaac aaggcgacgt aatcgaaaaa
    14881 ggtcaattac taactgaatt tgatattgaa ggcatcaaag ctgctggata tgacgttaca
    14941 actccagtag tagtaacaaa ctccaatcaa tatttagacg taatgattac agatgcaaaa
    15001 gaagcgaaac tagaagaacg tttaatcaca ttagtaatct aaaattcatt aataaacagc
    15061 ttgggcgtaa atctgctcaa gctgttttta tgttatactg agggaaaaat aggcggtgag
    15121 cggatgttag caaagggcga tttgataggg ataatttgtt gttctgatgg tcgaaaaaaa
    15181 gaagacgaga aggatttgaa gcgccttaaa caagccttag aaaaggaatt tggacttcag
    15241 gtggtttttg cgaaaactat ttttcaaata gatgattcgc cttttagtgg tactcctgag
    15301 gaacgagcag ccgaattaat gaaactatat caaaatatgg atgtaaaaat gatttttgac
    15361 atttcaggag gggatgcggc taatcaagta ttaccatatc ttaattttaa cattataaaa
    15421 aaagcagcca aaccttttat cggctatagc gacttaaccg taatattaaa tgcaattttt
    15481 gcgaagacga agcagcctgg ctttaattat ttactgcgaa atttagcagg tgaagctagc
    15541 gagatacaac gagtccaatt ccaaaaaaca tttttcgaga atcaaattgc gataaatggg
    15601 aaatccctta atgagtttga atggagcctg ggtgagatcg ttggtggaaa tatccgctgt
    15661 tttttaaaac tagcaggaac agaatttatg cctgacgtct cgaataaaat aattttgtta
    15721 gaaagtttag gtggaaaaga ggcgaaaatt gcttcttatg tagcgcaatt agaacagtta
    15781 ggtgtgtttt cgaaatgctt aggaatagtt gttggggaac acactgaggc tgagaagaac
    15841 ggggaatacg acagaatagg aatcttatat caacagattg gattaaaata taagttg
//
LOCUS       DASDYK010000055        15790 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.055, whole genome shotgun sequence.
ACCESSION   DASDYK010000055 DASDYK010000000
VERSION     DASDYK010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15790
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.055"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            102..563
                     /locus_tag="U0308_001735"
     CDS             102..563
                     /locus_tag="U0308_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HEM2316698.1"
                     /translation="MFTESMLFLLLFLLLGLIAKNNSLIIAVAVVILLKLFHVDGKAM
                     EMIQAKGINWGVTIITVAILIPIATGQIGFKDLIDSFKSAAGWIGLGAGIAVSILAKK
                     GVGYMAVDPQVTVSLVFGTILAVVLFRGIAAGPVIAAGIAYMAMQLVAFIK"
     gene            600..1721
                     /gene="citZ"
                     /locus_tag="U0308_001736"
     CDS             600..1721
                     /gene="citZ"
                     /locus_tag="U0308_001736"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEM2316699.1"
                     /translation="MTLSKGLENVYVAETSISSIIDDMLTYVGYGIDDLMENNASFEE
                     VIYLLWHLRLPNKDEFKKFKREIQENMAVSETIITSLRMQNHQKLHPMSVLRTTVSML
                     GVFDTEAELDDGEAVYRKGLRLQAKMPTIVAAFSRIRRGLDPIPPREDLNMAANFLYM
                     ITGEEADALSVEAMNKALVLHADHEFNASTFTARVCVATLSDVYSGVTAAIGALKGPL
                     HGGANERVFDMLEEIDQAGDVRNYIQEKIDTKQKIMGFGHRVYRGGDPRAQHLREMSR
                     KLTAEKGEEKWFDISLQVEESVWELKHLKPNVDFYSASVYHALGIDRDLFTLVFSVSR
                     VSGWLAHIFEQYRDNRLIRPRAIYVGPENRSYLPVEERI"
     gene            1741..3003
                     /gene="icd"
                     /locus_tag="U0308_001737"
     CDS             1741..3003
                     /gene="icd"
                     /locus_tag="U0308_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEM2316700.1"
                     /translation="MSQKIQVENGVLKTPNNPVIPFIEGDGTGSDIWAAAKRVLDAAV
                     KKAYNGEKEIAWKEVLAGEKAFKQTGEWLPQATLDTIDEYLIAIKGPLTTPIGGGIRS
                     LNVALRQELDLYVCLRPVRYFKGVPSPVKRPEDTDMVIFRENTEDIYAGIEFKEGSEE
                     SKKLIDFLKSEFGVDKIRFPETSGIGIKPISKEGTERLVRSAIEYAIKEGRKSLTLVH
                     KGNIMKFTEGAFKNWGYDLCEREYGDKVFTWNEYDRIKEAEGTEVADAKQKEALAAGK
                     ILVKDSIADIFLQQILTRPAEFDVVATMNLNGDYISDALAAQVGGIGIAPGANINYLT
                     GHAIFEATHGTAPKYAGLDKVNPSSVILSGTLLLEHIGWGEAAALINQSMEKTIAAKT
                     VTYDFARLMDGATEVKCSEFADELIKNF"
     gene            3168..5795
                     /gene="polA"
                     /locus_tag="U0308_001738"
     CDS             3168..5795
                     /gene="polA"
                     /locus_tag="U0308_001738"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEM2316701.1"
                     /translation="MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNV
                     LEKEKPSHVLVAFDAGKTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQY
                     ELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNT
                     PETLKEKYNLTPQQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHA
                     EEISGKKLKEKVLENKELAILSKELATINVDSPIECTVESTKYDGYQTEKVIPLLKEM
                     NFTTLLKNIEGDTPEETKELKELSFEIVTELKEKHFGGKTALYVELENDNYHTANFIG
                     LTVHSSQGTYFFTKETAESSEVFRKWVESDQTKVVYDAKKTMVAMNRIGLAISGITFD
                     IMLASYLLNPSDSIDDFTSVAIRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKA
                     VAIADLEKRLVDDLEENEQLALMEDLELPLTFVLAEMEMQGVSVDTERLENMKVELAG
                     RLKTLEESIHSLAGEEFNINSPKQLGVILFEKLGLPAVKKTKTGYSTAADVLESLSGK
                     HAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQN
                     IPIRLEEGRKIRQVFVPSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHT
                     KTAMDVFHVEQDEVDSLMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAKDFIDRYFV
                     SYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTAMNTPIQGS
                     AADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVE
                     LSVPLKVDSAFGDTWYDAK"
     gene            5819..6640
                     /gene="mutM"
                     /locus_tag="U0308_001739"
     CDS             5819..6640
                     /gene="mutM"
                     /locus_tag="U0308_001739"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HEM2316702.1"
                     /translation="MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVH
                     MLVGQEIEGVRRRGKFLLFDLTNCTILSHLRMEGKFRLMDEKEEVSKHTHIIFHFEDH
                     TELRFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKT
                     ALLDQKLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGG
                     STVRTYVNSQGKLGQYQDKLKVYGKTDEPCVVCGKPIEKIKLNGRGTHFCPNCQK"
     gene            6657..7259
                     /locus_tag="U0308_001740"
     CDS             6657..7259
                     /locus_tag="U0308_001740"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEM2316703.1"
                     /translation="MGKTIGLTGSVATGKSTVSNMIQQAGIPLVDADIAARKVVERGT
                     EGLKEIVAYFGEEILLADGTLNRAKLGEIIFKDKEKREKLNEITHPRVKDYMLEARER
                     FFEAGEELVFFDIPLLFESHLESLVDKIVVVWTTPETELKRLMERNNLTKEDALRRIE
                     SQMGIDEKARKADFVIDNNESLEKTQKQVLTFIKRFVKNK"
     gene            7337..7801
                     /gene="nrdR"
                     /locus_tag="U0308_001741"
     CDS             7337..7801
                     /gene="nrdR"
                     /locus_tag="U0308_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEM2316704.1"
                     /translation="MRCPTCQYNGTRVVDSRPADDGNSIRRRRECEKCGFRFTTFEKV
                     EESPLIVVKKDGAREEFAREKVRRGLIRACEKRPVSAEQIEEIVNEVERELRNIGDSE
                     IASDLIGEKVMNKLANLDEVAYVRFASVYRQFKDISVFVEELKDLMEKNKDR"
     gene            7807..9183
                     /locus_tag="U0308_001742"
     CDS             7807..9183
                     /locus_tag="U0308_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation and membrane attachment
                     family protein"
                     /protein_id="HEM2316705.1"
                     /translation="MTEFWMELQAVDSYQVKASGILTGADRKIITMLYQPLMGAECLA
                     LYQTLFTEVEENRLWSEAHSHVQLLNMLDISLKALFEARLKLEGLGLLKSYVKTENDQ
                     RFYIYEILPPLSPEKFFSDGLLNIYLYSKIGNAQFQRLRRFFADEAFDTATYSEITRS
                     FQDVFEPFKGGSSAVTTETSQKLLDKVTPKEIEFDDASFDFNLFLSLLSPGMIAREKI
                     TKEVRQTILKLHGIYQVSEKDMPSYLYRALDANGEIDIVYLRKIVREGYTIEHGAPPK
                     LQMKQETPVDKEPEESLNDEEALQVYLESITPFQLLVDISDGAVPAETDLRVVEEVMN
                     QQNLPVPVMNVLIEYVLLRLDRKLSKNYMMTIAAHWKRKNVKTAKEAMDLAWQEHEKY
                     KRLQEEPATPKTNNYNRNYQKTTRKEILPDWFDKEQVAPAENKMTDKEKQTLEEQVRE
                     IKERLNKR"
     gene            9193..10116
                     /gene="dnaI"
                     /locus_tag="U0308_001743"
     CDS             9193..10116
                     /gene="dnaI"
                     /locus_tag="U0308_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaI"
                     /protein_id="HEM2316706.1"
                     /translation="MDNIERTLGQLFEGRDFEKEYQGLKQQVLHYQPIQDFFKEHKEE
                     VTEQLVNQNLSNLYEFMTQHKKFTEQEETIMPGYAPKLVLNGEFITVTYYPTKEKIEE
                     DKRRAVERRIRSLYMPKQVVDANLADFYTDEESRQLALVEAYQFLNNYPPKSGERVKG
                     LFIHGSFGTGKSYLLGALAKELALKGISTTLVYLPEFMREVKQSISDNTVGEKIQFAK
                     ETEVLMLDDIGAESMTAWTRDEVLGAILQFRMQEELPTFFSSNYNMDQLENHLMFAQN
                     GTEEKLKARRIMERVRYLSKEVNLEGKNRRF"
     misc_binding    10167..10397
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            10466..12388
                     /gene="thrS"
                     /locus_tag="U0308_001744"
     CDS             10466..12388
                     /gene="thrS"
                     /locus_tag="U0308_001744"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEM2316707.1"
                     /translation="MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELL
                     DLVTPIHEDGAIEIVTPDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFY
                     YDIDTEAVISDESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIE
                     AIPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYG
                     TAFFDKNGLKEFIQMQKEAKERDHRKLGKELDLFANSIEVGQGLPLWLPKGATIRRVI
                     ERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNC
                     PHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQ
                     IKDEFKRVVELILEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMD
                     EMEMDYFEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEK
                     HRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDK
                     LQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETM
                     DLDAFIAQVVAEVSKY"
     gene            12496..13080
                     /locus_tag="U0308_001745"
     CDS             12496..13080
                     /locus_tag="U0308_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEM2316708.1"
                     /translation="MDVNNVELIISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMI
                     RRKSMARISQKPGKTQTLNFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITS
                     REQLRGVIQIVDLRHKPTEDDRMMYEFLKYYDIPVIVVATKADKIPRSKWQKNAKIVR
                     ETLDFDPDDKFVLFSSETKMGKDEAWQFIKEGME"
     gene            13208..14515
                     /locus_tag="U0308_001746"
     CDS             13208..14515
                     /locus_tag="U0308_001746"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEM2316709.1"
                     /translation="MFILTMGLNHHTAPIDIREKLVFKESEEEMALVTLQQEKSILEN
                     VIISTCNRTEIVAVVDQIHTGRYYLKRFMANWFQMDMEKIEPYLFFHEESDAVNHLYK
                     VTAGLDSLVLGETQILGQVKHAFEIAKQTATTGTLLNKLFREVVTFAKKVHHHTKINE
                     NAVSVSYAAVEVAKKLYGSLDNKKIVLVGAGEMSELALQNLAGSGIADITIINRTKSN
                     AELLANQFQAKVGAYENMNEHLMLADIVLVSTSAAEPIIKQAAMQDLMEQKASSMLVI
                     DIGLPRNVEHDCSYIPNFHLYDIDDLAGVVSANSLERQRIVLELEKTIEAEVRNFFEW
                     EKQLGVVPVIRALREKALDMQEVTMTSLENKLPGLTEREYIQIGKHMKSIINQMLKQP
                     ISELKEMSVEEDATTSIEHFKRIFGLSETDVTVIEKEQAETRS"
     gene            14519..15448
                     /gene="hemC"
                     /locus_tag="U0308_001747"
     CDS             14519..15448
                     /gene="hemC"
                     /locus_tag="U0308_001747"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEM2316710.1"
                     /translation="MKRKIIVGSRRSKLALTQSNWVINKLKENYPEFDFEIKEIVTKG
                     DRILDVTLSKVGGKGLFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRES
                     PLDCFVFNRVNSLDELPQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHA
                     ENFDAIILAKAGLARMGWLENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDML
                     TSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEVVHFKGLVGNADGSIILAS
                     EQAGANPSEIGNKVAEDLLSEGADTIIKELRNI"
     gene            15445..>15790
                     /locus_tag="U0308_001748"
     CDS             15445..>15790
                     /locus_tag="U0308_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEM2316711.1"
                     /translation="MSKKVVLTREANKNKPWQTYFSQNGFEVTSIPLIKTRPIKMDLS
                     REQQQTDWLFLTSANAVEYFFTNQHERFNYKIAVIGEKTKEKLAEFGHEPNFVPSIYQ
                     SEVFLEEWLNENP"
BASE COUNT         5424 a         2613 c         3406 g         4347 t
ORIGIN      
        1 tcattttcct tatggcattt tagtattact ataaggtatg tttatgatat aataattgtt
       61 atctcgcttc ctagatgcgt gatattgaaa ggtgacttaa tatgtttacg gaaagtatgt
      121 tgtttttact tcttttttta cttctcggac ttatagcaaa aaataattcg cttatcattg
      181 ctgtagctgt cgttattttg ttgaagttat ttcacgtcga tggcaaagca atggaaatga
      241 ttcaagcaaa agggataaat tggggtgtaa cgattattac ggttgctatc ttaattccaa
      301 tcgcaactgg tcaaatcggt tttaaagatt taattgattc tttcaaatcg gcagctggct
      361 ggattggcct tggtgcagga attgccgttt ctatcttagc gaaaaaaggt gtaggctata
      421 tggccgttga tccacaagtg actgtctcac tagtattcgg gaccatttta gcagtggtgc
      481 tttttagagg gattgctgct ggaccagtaa ttgcagctgg tattgcgtac atggcaatgc
      541 agttagttgc attcataaaa taagtacata cgtaaaaaag gataaaagga ggaaatgaaa
      601 tgacgttatc taaaggctta gaaaatgtat atgttgctga aacttccatt agctctatca
      661 ttgatgatat gttaacttat gttggctatg gtattgacga tttaatggaa aataacgctt
      721 cttttgaaga agtgatttac ttattatggc atttacgttt gccgaataaa gatgaattta
      781 aaaaatttaa acgagaaatc caagaaaata tggcagtgtc tgaaacaatc attacgagct
      841 taagaatgca aaatcaccaa aaattacatc cgatgagtgt tttaagaact acagtttcta
      901 tgctcggtgt atttgataca gaagctgaat tagacgacgg ggaagcagtt taccgtaaag
      961 gtttgcgact tcaagcgaaa atgccaacca ttgttgccgc tttttccaga attcgtcgcg
     1021 gactcgatcc aattccaccg agagaagatt taaatatggc agcaaatttc ctatatatga
     1081 ttacaggaga agaagcagat gcattatcag tagaagcaat gaataaagcg ctcgtactgc
     1141 acgctgatca cgaatttaat gcgtctactt ttacagcgcg agtttgtgtg gcaacgcttt
     1201 cggatgttta ttccggcgta acagctgcaa tcggtgcgct gaaaggcccg cttcatggtg
     1261 gtgccaatga acgcgtattt gatatgttag aagaaattga ccaagctggt gatgtgcgta
     1321 attacattca agaaaaaatt gatacgaagc aaaagattat gggatttggt caccgtgttt
     1381 atcgcggcgg agatcctcgt gcgcaacatt tgcgtgaaat gtccagaaag ttaactgctg
     1441 aaaaaggcga agagaaatgg tttgatattt cgctgcaagt agaagaatct gtttgggaat
     1501 tgaaacactt aaaaccgaat gtcgatttct attcagcctc cgtttatcat gcgcttggta
     1561 ttgaccgcga cttgtttacg cttgtgtttt ctgtgagtcg tgtatctggt tggttagcac
     1621 acattttcga gcaataccgt gataatcgtc ttattcgtcc gcgtgcaatt tacgttggac
     1681 ctgaaaatag aagttattta cctgtagaag aacgaattta atcgaggagg aacaaacttt
     1741 atgagtcaaa aaattcaagt agaaaacggt gtgctcaaaa caccaaacaa cccagtcatt
     1801 ccttttattg aaggggacgg aactggttca gacatctggg cagctgcaaa acgcgtttta
     1861 gatgccgcag taaaaaaagc ttacaatggc gaaaaagaaa ttgcttggaa agaagtatta
     1921 gctggtgaaa aagcatttaa acaaacagga gaatggttac cacaagcgac tttagataca
     1981 attgatgaat atttgattgc tattaaagga ccgcttacta ctccaatcgg tggaggcatt
     2041 cgttcgttaa acgttgccct gcgccaagag ttagatttat atgtttgttt acgtccagtt
     2101 cgttatttca aaggcgttcc ttcaccggtg aaacgtccgg aagacacaga tatggtcatt
     2161 ttccgtgaga atacagaaga tatatatgca gggattgaat ttaaagaagg cagcgaagaa
     2221 tcaaaaaaac taatcgactt cttaaaatct gagtttggcg ttgacaaaat tcgtttcccg
     2281 gaaacttctg gtattggtat taagccaatt tccaaagagg gaacagagcg tttagtgcgt
     2341 tcggcgattg aatatgcaat taaagaaggt cgtaaatcat taacgcttgt acacaaaggg
     2401 aatatcatga aattcacaga aggagctttc aaaaattggg gctatgactt atgtgaacgc
     2461 gaatatggcg ataaagtatt tacttggaat gagtatgatc gcattaaaga agcagaagga
     2521 acagaagttg ctgatgcgaa acaaaaagaa gcgcttgctg ctgggaaaat tttagtcaaa
     2581 gattcgattg cggatatttt cttgcaacaa atcttaactc gcccggctga atttgatgta
     2641 gttgctacaa tgaacttgaa tggagattac atttctgatg cacttgctgc tcaagtaggc
     2701 ggaatcggta ttgctccagg agcaaacatt aactacttaa ctggccatgc aattttcgaa
     2761 gcgacgcatg gtactgcacc gaaatatgca ggtcttgata aagtgaatcc ttcatcagtt
     2821 attttatctg ggacacttct tcttgaacat attggttggg gtgaagcggc tgcattaatt
     2881 aatcagtcaa tggaaaaaac aatcgctgcg aaaaccgtaa cttatgattt tgctcgatta
     2941 atggatggtg cgacagaagt taaatgttcg gaatttgcag atgaattaat aaaaaatttc
     3001 taaaacaatc tattttaact tctaaaacta gtctgtattt ttatttttaa ccataaatat
     3061 acgtttttaa aacaaaccat ttaatcccat tcggataagt ggtttgtttt tatgttccta
     3121 tggtaaaata gacacaagtg aatgacaata tcgaggagga tatccctgtg aataaattag
     3181 tattaattga tggaaatagt attgcgaatc gcgcctttta tgctttaccg cttttaaata
     3241 atgataaagg tgtttacaca aatgcggtgt atggtttcgc aatgatgttg atgaatgtac
     3301 tcgaaaaaga aaaacctagc catgtgctcg ttgcatttga tgctgggaaa acaactttca
     3361 gacatacaac atttaaaggt tataaaggcg gacgtcaaaa aaccccaagt gagttatctg
     3421 aacagtttcc attcatccga gaacttttaa cggcgtatga tatcccgcaa tatgaacttg
     3481 ccaattatga ggcagatgat attatcggaa cattgacgaa aaaagcggaa gcagacggaa
     3541 tggaagtagc aatcattacc ggagaccggg acttaacgca attagcttct gaaaaaacaa
     3601 cggtttatat tactaaaaaa ggcatagccg atatggaaac caacacacca gaaacactaa
     3661 aagaaaaata caatctgact cctcaacaaa tcattgatat gaagggttta atgggtgatt
     3721 cctccgataa tattcctggt attccaggcg ttggtgaaaa aactgcctta aaactcttac
     3781 atgaatttgg tggaacggtg gaaagtgtgt tagagcatgc cgaggaaatt tccggtaaaa
     3841 aactaaaaga aaaagtactg gaaaataaag aattagctat tttaagtaaa gagttagcta
     3901 caatcaatgt ggattcaccg attgaatgca cggtcgaaag cacgaaatac gacggctatc
     3961 aaacagaaaa agttatccct ttattaaaag aaatgaattt tacaacactt ttgaaaaata
     4021 tcgagggaga tacaccagaa gaaacgaaag aactaaaaga gttgtctttt gaaatcgtaa
     4081 cagaattaaa agaaaaacat tttggtggga aaaccgcgct ttatgtggag ctagaaaacg
     4141 ataattacca tacagctaat ttcattggat taacagtaca ttctagccaa gggacgtatt
     4201 tctttacaaa agaaacagcc gaaagtagtg aggtattccg caaatgggta gaaagtgatc
     4261 aaacaaaagt agtgtacgat gcgaagaaaa caatggttgc aatgaaccgc attggtttag
     4321 ccatttctgg tatcaccttt gatatcatgt tagcatctta cttgctaaat ccatctgatt
     4381 cgattgatga ctttacaagt gttgcaatac gacatgatta cacagaagta gaaacagatg
     4441 aagcagtcta cggaaaaggt gctaaacgta gcactcctga agaaagcatt gttgcggcac
     4501 acttagctag aaaagcagtg gctattgctg acttagagaa aagactagtt gatgatttag
     4561 aagaaaatga acaactagct ttgatggaag accttgagct acctctaact tttgtattag
     4621 cagaaatgga aatgcaaggg gttagtgtag atacagaacg tctagagaat atgaaagtgg
     4681 agctagcggg tagactgaaa acattggaag agtcgatcca ttctctagcc ggcgaagaat
     4741 tcaatattaa ttcaccgaaa caactaggtg tgattttatt tgaaaagctt ggtctcccag
     4801 ctgtcaagaa aacaaaaaca ggttattcaa cggctgccga tgtactggaa agtttatctg
     4861 gtaaacacgc gattattgat gaaattttgt tatatcgtca acttggtaaa attcagtcca
     4921 cttatatcga agggctgctt aaagtgacag ataaagaaac acataaagta cacacacgtt
     4981 tcaaccaaac attaacgcaa acaggacgct taagttcagt tgatccgaac ttgcaaaata
     5041 tccctattcg tttagaagaa ggacggaaaa ttagacaagt tttcgtaccg agtaaaccag
     5101 gttggaaaat gttttcagcc gattattctc aagtagagct gagagtctta gcacatattt
     5161 cggaagatga aaatttaatt tatgcattta agcacgatta tgatattcat acgaaaacgg
     5221 cgatggacgt gtttcatgtt gagcaagacg aagtggattc attaatgcgt cgtcaggcta
     5281 aagcggtaaa ctttggtatt gtatatggaa ttagtgatta tgggctttcg caaaatcttg
     5341 gtattacgcg taaagaagca aaagacttta ttgatcgtta ttttgtgagc tatccagccg
     5401 tgaaagaata tatgcaagac atcgttcgtt ttgcgaaaga aaaaggctat gtagagacca
     5461 ttttacatcg tcgtcggtat attccagaga ttgtcagtcg taattttaat gttcgcggat
     5521 ttgcagaaag aacggcgatg aacacgccta ttcaaggtag tgccgctgat attatcaaaa
     5581 aagcgatgat tctgatgagc gagcgtttag tatctgaaaa attagaagca aaattattac
     5641 tacaagtaca cgatgaatta atcttcgagg cgcctgaagc tgaaatcgct aaattagaag
     5701 aaattgtccc agatgttatg gaaaatgcag tagagctttc tgtaccgcta aaagtagata
     5761 gcgcatttgg tgacacttgg tacgacgcga aataaataga gaaacgggga gtttatatat
     5821 gccagaaatg ccggaagtag aaaatgtccg cgcaacttta caagaattag tcccaggtaa
     5881 aaaaatagat caagtaattg ttcgtgttcc aaaaatgatt gtatcaacac cacccgatga
     5941 gtttgtgcat atgcttgtcg ggcaagaaat agagggtgta cgccgtcgtg gtaaattctt
     6001 actttttgac ttaaccaact gtacgatttt atcgcattta cgaatggaag gtaaatttcg
     6061 gttaatggat gaaaaggaag aggttagcaa gcatacgcat attatttttc attttgaaga
     6121 tcacacggaa ttgcgttttt tagatgtgcg aaaatttggc acgatggaag taacaaataa
     6181 atacggtgag ggtgaaacgc ggtcgattaa aaagcttggc ccagaaccgc tgacgcaagc
     6241 ctttacatca acggattttg cgactggtgt aaaaaaaaca agccgcgcca tcaaaacggc
     6301 tttacttgat caaaagttag tagccggagt aggaaatatt tatgcggatg aaatttgttt
     6361 tgaagcaaaa gtgcgcccgg aaagagcagc taactcactt tcagacaaag aaatcaaacg
     6421 tatttttgaa gcgacgaaaa gtattatgac tgaagctgta gcacttggtg gctccactgt
     6481 cagaacatat gtaaattcgc aagggaagct tggacaatat caagataaat taaaagtata
     6541 cggcaaaaca gacgaaccgt gtgttgtttg tggaaagcca attgaaaaaa ttaaattaaa
     6601 cggacgcggg acacattttt gcccgaattg ccaaaaatag aaagcgagct gaaatcatgg
     6661 ggaaaacgat tggattaaca ggaagtgtag caacagggaa atcaacagtg agcaacatga
     6721 ttcagcaagc gggtattcca ttagtagatg cagatattgc tgctagaaaa gtagtggagc
     6781 gtggcacaga aggactaaaa gaaatcgttg cttattttgg ggaagaaatt ttacttgcag
     6841 atggcacatt aaatcgagct aaattaggag aaattatttt taaagataag gaaaagcgtg
     6901 aaaagttaaa tgaaattacg catccacgtg tgaaagacta tatgttggaa gcgcgcgaac
     6961 gtttttttga agcaggagag gagcttgtct ttttcgatat tccgcttttg tttgaaagtc
     7021 atttagaatc gttggtggat aaaatagttg ttgtttggac cacccctgaa acagagttaa
     7081 aacgcctgat ggagcgaaat aatctaacaa aagaagatgc attaagaaga attgaaagcc
     7141 aaatgggaat cgatgaaaag gcgagaaaag ctgattttgt catcgataat aatgaatcac
     7201 ttgaaaagac acaaaaacaa gttcttacat ttatcaagcg ttttgtaaag aacaaatagc
     7261 cacccttact ttcacatggt ataatgaggc atacaaataa acagatagag aaagctagag
     7321 ataggagtga gtttttgtga gatgtcctac ttgtcaatat aatggtacac gtgttgtaga
     7381 ctcaagaccg gcagatgatg gcaattccat ccgaagacgg cgtgaatgtg aaaaatgcgg
     7441 atttcgtttt actacttttg aaaaggtaga agagagtcct ttaatagttg tgaaaaaaga
     7501 tggagcaaga gaagaattcg ctcgtgaaaa agtgcgacgc ggcttaataa gagcatgtga
     7561 aaaacgacca gttagcgctg aacaaattga agaaattgtc aatgaggtag aacgtgaact
     7621 gcgaaatatt ggagacagtg aaatcgcgtc tgacttaatt ggtgaaaaag tgatgaataa
     7681 attagcgaat ctcgatgaag tagcctacgt gcgcttcgct tcggtgtatc gccaatttaa
     7741 agatattagt gtgtttgtcg aagagttaaa agatttaatg gaaaaaaata aagataggtg
     7801 agtaaattga cggaattttg gatggagctt caagcggtag acagctatca agtaaaagca
     7861 agtggaatct tgaccggcgc cgacagaaaa attattacga tgttatatca accgctaatg
     7921 ggggcggagt gtcttgcttt atatcaaaca ctgttcacag aagtcgaaga aaacagactt
     7981 tggtcagaag cgcattcgca cgtccaactt ttaaatatgc ttgatattag tttgaaagcg
     8041 ttattcgagg caaggctaaa attagaaggc ttaggtcttt taaagagtta tgtgaagacc
     8101 gaaaacgatc aacgctttta tatttacgaa atcttgccac cgttatcacc agaaaagttt
     8161 ttttcagatg gtctattaaa tatttattta tatagcaaaa ttggcaatgc tcagtttcaa
     8221 cgtttgcgtc gttttttcgc agacgaggca tttgacacag ctacatacag tgaaatcact
     8281 cgttcgtttc aagatgtttt cgaaccgttt aaaggtggta gtagtgcagt tacgactgaa
     8341 actagtcaaa agttactaga caaagtgacg ccaaaagaaa ttgaatttga tgacgcgagt
     8401 tttgacttta atttgttttt gagcttgctt tcaccgggaa tgattgctcg cgaaaagata
     8461 acaaaagaag tacgccaaac gatattaaaa cttcacggga tttatcaagt ttctgaaaaa
     8521 gatatgccga gttatttgta tcgtgcgctt gatgcaaatg gtgaaatcga catcgtttat
     8581 ttgcgtaaaa tcgttcgtga aggctacacc atcgaacacg gtgcgccgcc aaaactgcaa
     8641 atgaagcagg aaacgcctgt cgataaagaa ccagaagaat cgttaaatga tgaagaagcg
     8701 ctgcaagtat atttagagag catcacgcct tttcaacttt tggtagacat ttcagacggg
     8761 gcagttcccg ctgaaaccga tttgcgcgtt gtagaagaag tcatgaacca gcaaaattta
     8821 ccagttcctg tgatgaatgt gctgattgag tacgtgttac tccggcttga ccggaagctt
     8881 tctaaaaatt acatgatgac gattgctgct cactggaaac gaaaaaatgt aaaaacagca
     8941 aaagaagcaa tggatctagc gtggcaagag cacgagaaat acaaacgact tcaagaagaa
     9001 ccagccacac caaaaacgaa taattacaac cgaaattatc aaaaaacaac gcgaaaagaa
     9061 attttgccgg attggtttga taaggagcaa gttgctccag ccgaaaataa aatgacagat
     9121 aaagaaaaac aaacactcga agaacaagtt cgtgaaatta aagaacgact aaataaaagg
     9181 taggtgaaga agatggataa catcgaaaga acattaggac agctttttga aggccgcgac
     9241 tttgaaaaag aataccaagg tttaaaacaa caagttctcc attatcaacc aattcaagac
     9301 tttttcaaag agcacaaaga agaggttacc gagcaattag ttaatcaaaa tttgtctaat
     9361 ttatatgaat ttatgacgca acacaaaaaa ttcacggaac aggaagaaac tataatgcct
     9421 ggttatgcac caaaacttgt tcttaatggg gaattcatca ctgtcaccta ctatccgacg
     9481 aaagagaaaa tagaagaaga taaacgccgt gcagttgagc gaagaattcg ttctctttat
     9541 atgcctaagc aagtagtgga cgcgaactta gcggactttt ataccgatga agaatcgcgt
     9601 caattagcgc ttgtggaagc atatcaattt ttaaataatt atcctccgaa aagtggggaa
     9661 cgtgtgaagg gcttatttat tcatggtagc tttgggactg ggaaatccta tttgttaggg
     9721 gcccttgcga aagaacttgc tttaaaaggt atttcaacta cacttgttta tttacccgag
     9781 ttcatgcgcg aagtgaaaca gtctatttct gacaatacag tcggtgaaaa aattcaattt
     9841 gcgaaagaaa cagaagtatt gatgctcgat gatattggcg cagaatcgat gaccgcttgg
     9901 acgcgagatg aagtgttggg tgcgattttg caattccgga tgcaagagga attaccaact
     9961 ttcttctcat caaattacaa catggatcaa ctagaaaatc atttaatgtt tgcccaaaat
    10021 ggtacggaag aaaaactaaa agctcgccga atcatggaac gggtgcgcta tttgtcgaaa
    10081 gaggttaact tagaagggaa aaatcgccgt ttctaaaaag tacttgcaaa tatgtttaat
    10141 cgggcttata atttgaagta atataaaaca aagtgatgaa aaggacaacc gatttaacgg
    10201 aaaattttag agaggaaggg ctagctggga accttctatt ggaacttaaa tttggaccac
    10261 cttggaactt ctattaggaa cgtgtttaac tagtaataat agacggatcg ctccgttata
    10321 agcgacaaga gtgaagtagt tatttttagc tatttctgaa tcttgggtgg aaccacgagc
    10381 ataaactcgt cccttgacaa caggagggat gggtttttta ttttgccctc ctaaccacac
    10441 taaaaaaaga aaaggagaga ttagtatgaa aatcacattt ccagacggtg cagtaaaaga
    10501 atttgagcca ggcgtttcaa cagcagatat tgctgcttct atcagcccag ggctaaaaaa
    10561 gaaagcactc gcaggtaaat taaacgggga gttacttgat ttagtaacac caatccacga
    10621 agacggagca atcgaaatcg taacaccaga ccatgaagat gcgcttggta ttttgcgtca
    10681 cagtacagct catttaatgg ctcaagcatt gaaacgcctt tatccagatg tgaaatttgg
    10741 tgttggccca gcgattgaat ctggtttcta ttatgatatt gatacagagg cagttattag
    10801 cgatgaatct cttgttgaaa ttgaaaaaga aatgcaaaaa attgtgcgtg aaaatgttcc
    10861 aattgagcgc gaagttgttt ctcgcgaaga agcaattaaa cgtttcaaag caattggaga
    10921 tcaatataaa ttagaactta tcgaagcaat cccagaagat gaaacagtga caatttatac
    10981 acaaggtgaa tttttcgacc tttgtcgcgg agtccatgtt ccttctactg gtaaaattca
    11041 agtgttcaaa ctacttagcg tggctggtgc atactggcgt ggcgatagta acaacaaaat
    11101 gctacaacgc atttacggca cagctttctt cgataaaaat ggcttaaaag aatttatcca
    11161 aatgcaaaaa gaagcgaaag aacgtgatca tcgtaaacta ggtaaagaac tagatttatt
    11221 tgcaaatagt attgaagttg gtcaaggttt accactttgg ttgccaaaag gtgcgactat
    11281 ccgacgcgtt atcgaacgat acattgtgga taaagaagaa cgccttggtt acaatcacgt
    11341 ttacactccg attatggcta atgttgagct ttataaaaca agcggccact gggatcatta
    11401 ccatgaagac atgttcccaa caatgaaaat ggacaacgaa gaactagttt tacgtccaat
    11461 gaactgcccg catcacatga tgatttataa aaatgatatc catagttacc gtgaactacc
    11521 aatccgtatt gccgagcttg gtatgatgca ccgttatgaa atgagtgggg cgctttcagg
    11581 acttcaacgt gttcgtggaa tgactttaaa tgatgcacac gtatttgttc gccctgacca
    11641 aatcaaagat gagttcaaac gggttgtaga gctaatttta gaagtatata aagactttga
    11701 tattaaagat tactccttcc gcctaagcta ccgtgatccg aaaaatactg aaaaatattt
    11761 tgacgatgat gctatgtggg aaaaagcgca agccatgctt aaatccgcca tggacgaaat
    11821 ggaaatggat tactttgaag cagaaggtga agctgcattt tacggtccaa aactagatgt
    11881 tcaagtgaaa actgcaatag gaaaagaaga aacactttcc actgtacaac ttgacttctt
    11941 acttccagaa cgctttgact taacttacat tggcgaagat ggcgaaaaac atcgtccagt
    12001 tgtcattcac cgtggagttg tatcgacaat ggaacgtttt gtcgcatatc taatcgaaga
    12061 atacaaaggt gctttcccaa cttggttagc tccagtacaa atggaactta ttccagttaa
    12121 cgcagatgcg catttagatt atgcaaaagg tgtacaagat aaattacaac gcgctggact
    12181 tcgtgctgaa gtggatgatc gtaatgaaaa attaggctat aaaatccgtg aagcacaaac
    12241 aaagaaaatt ccttatgcct tagtattagg cgaccaagaa gtagaggctg gttctgttaa
    12301 tgttcgtcgt tacggctcta aagactctga aacaatggat ttagatgcat ttatcgcaca
    12361 ggttgttgct gaagtaagca aatattaatc acgaaaatac tgtctcttaa agggggcagt
    12421 attttttcat ggtgcttttt tcctcttttt ccgttatact agtaaaagat aatgaataga
    12481 acaggatgga aaattatgga tgtaaataat gtagaactaa taataagcgc tgttcgacca
    12541 gagcaatatc ccgagacaga ccttccagaa tatgcacttg caggtcgatc aaacgttgga
    12601 aaatcatctt ttatcaatac gatgattcgc cgcaaaagta tggcaagaat ttcacaaaaa
    12661 ccaggaaaaa cacaaacact aaatttttat aaaattgaag aagcactttt ctttgtcgat
    12721 gtacccggtt atggtttcgc taaagtttcg aaaacagaac gagaaaaatg gggcgtcatg
    12781 attgaaacct atattacttc tcgcgagcaa cttcgtggtg ttatccaaat tgttgattta
    12841 cgacataagc caactgaaga tgaccgaatg atgtatgaat ttctgaagta ttacgacatc
    12901 cctgtcatcg tcgtagcaac gaaagcagac aaaatcccac gcagtaaatg gcaaaaaaat
    12961 gctaaaattg tccgagaaac acttgatttt gatcctgatg acaaatttgt cttattttcc
    13021 tctgaaacaa aaatgggaaa agacgaagca tggcagttta tcaaagaagg aatggaataa
    13081 tagaaggagt tggaatgaaa aatccagctc ttttttccgt ctaaatacat aaacggacta
    13141 tttggtgaac acatcgaaaa gtggtagaat gtattagagt tcaatttaat tttaggagga
    13201 ttatcgaatg tttattctca ccatggggct gaatcatcac acagcaccaa tcgacatccg
    13261 cgaaaaatta gtttttaaag aaagcgaaga agaaatggcc ttagtaacat tacagcagga
    13321 aaaaagtatc ctcgaaaatg ttattatttc aacgtgcaat cgaacagaaa ttgttgcggt
    13381 tgttgatcaa atacatacag gtagatatta cttaaaacgc tttatggcta actggtttca
    13441 aatggatatg gaaaaaatcg aaccttattt gtttttccat gaagaatcag atgctgtcaa
    13501 tcatttatat aaagtaaccg cgggacttga ttcgttagta ctgggagaaa cgcaaatcct
    13561 cggacaagta aaacatgcat tcgaaatcgc caaacaaacg gctacaacag gtacactttt
    13621 aaataaactt tttcgggaag tagttacttt cgcaaaaaaa gtacaccacc atacaaaaat
    13681 taatgaaaat gctgtgtctg tcagttatgc cgctgtagag gttgcaaaaa aattatatgg
    13741 ttcattagac aataagaaaa ttgtgctagt tggtgcaggg gaaatgagtg aactcgcttt
    13801 gcaaaatctc gctgggagcg gcattgcaga tataaccatc atcaaccgta ctaaatctaa
    13861 tgcagaatta ttagcaaatc aatttcaagc aaaagtgggc gcatatgaaa atatgaatga
    13921 acatttgatg ctagcagaca tcgttctcgt ttcgacaagt gcggcagaac ctattattaa
    13981 acaagctgct atgcaagatt tgatggaaca aaaagcgagt tcgatgcttg taattgatat
    14041 cggtttacct cgaaatgttg aacatgattg ttcatacatt cccaatttcc atttatatga
    14101 cattgacgat ttggcagggg tcgttagcgc gaactcatta gagcggcagc gaatcgttct
    14161 ggaacttgaa aaaactattg aggcagaagt tcgtaacttt ttcgagtggg aaaagcaact
    14221 aggcgtcgtc cctgttattc gtgctttgcg tgaaaaagcg ttagatatgc aagaagttac
    14281 tatgactagt ttagaaaata aacttcctgg actaacagaa cgcgaataca ttcaaattgg
    14341 aaaacatatg aaaagcatta taaaccaaat gctgaaacaa cctatctcag aattaaaaga
    14401 aatgtctgta gaagaagatg caactacaag tattgaacat tttaaacgta tttttgggtt
    14461 gagtgaaaca gatgttactg taatagaaaa agaacaagcc gaaacgagga gttaacggat
    14521 gaaacggaaa ataattgttg gttctagacg aagcaagtta gctttaactc agtctaattg
    14581 ggtgattaac aagctcaaag aaaattatcc tgagttcgat tttgagataa aagaaattgt
    14641 tacaaaaggg gaccgtattt tagatgtaac acttagcaaa gtaggcggaa aaggtctatt
    14701 tgtatccgaa gtggagcagg ctttaagtga tgaagtgatt gattttgcgg tacatagcat
    14761 gaaagatgtt ccatcaagtt tgaaagaagg gttaattatt ggcgcgattc caaaacgtga
    14821 atcgccatta gattgcttcg ttttcaatcg agtgaattct ctagatgagt taccacaagg
    14881 ctcggtcatt ggtacaagta gcctccgtag agcggcacaa cttctaaaac atcgacctga
    14941 ttttgtgatt aaaccgattc gaggcaatat cgatacacgt cttcaaaaat tacatgcaga
    15001 aaattttgat gcaattatct tagcaaaagc tgggttagct cgtatgggtt ggttagaaaa
    15061 tactacgtta aaactagaag acatcccacc agaattatgt ttgccagctg ttggacaagg
    15121 tgcacttgct atcgagtgtc gcgaaagtga tcaacaaatc cgcgatatgt taacttctat
    15181 tcatcacgaa gaaactggaa tttgtgtaga agcagaacgt gttttcttga aaaaattaaa
    15241 tggtggctgt gaaattccga ttgccggctt tgctacaaga gctaatgaag tcgttcattt
    15301 taaaggttta gttggtaatg cggatggttc catcattctt gcatccgaac aagctggtgc
    15361 aaatccaagt gaaattggaa ataaagtagc agaagatttg ctaagtgaag gtgcagatac
    15421 tattatcaaa gaactgagaa atatatgagt aaaaaagttg ttttaacaag agaagcgaat
    15481 aaaaacaaac catggcaaac ctatttttcg caaaatggtt ttgaagtgac gtcaatcccg
    15541 ctgattaaaa cacgacctat aaaaatggat ttgagtcgag aacaacaaca aacagactgg
    15601 ctttttttaa caagtgcaaa tgctgtagaa tatttcttta cgaaccaaca tgaaagattc
    15661 aattataaaa tagctgtcat cggtgaaaaa acaaaagaaa aactggcaga atttggtcac
    15721 gaaccaaatt ttgtcccatc tatctatcag tcagaagtat ttttagaaga atggctaaac
    15781 gaaaacccag
//
LOCUS       DASDYK010000056        15777 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.056, whole genome shotgun sequence.
ACCESSION   DASDYK010000056 DASDYK010000000
VERSION     DASDYK010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15777)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15777)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15777
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.056"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..345
                     /locus_tag="U0308_001749"
     CDS             <1..345
                     /locus_tag="U0308_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HEM2316712.1"
                     /translation="AKYKSWENKSFTISTQIEKKVAKWDEINELFSHEKWANDDYFSD
                     ICSALTENRVKGNAGHAASYWNRKGSIEKEIFANLFAMLAMNKQESIAMVKKQFPMIY
                     GSFIKMLEGELK"
     gene            342..512
                     /locus_tag="U0308_001750"
     CDS             342..512
                     /locus_tag="U0308_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316713.1"
                     /translation="MINYKKWLDSMMSTEDGKILFERYKKLYGHYPPFLLDATEKEQW
                     DEIKRLIKDADK"
     gene            561..1670
                     /locus_tag="U0308_001751"
     CDS             561..1670
                     /locus_tag="U0308_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2213 domain-containing protein"
                     /protein_id="HEM2316714.1"
                     /translation="MKVQRFDKSFITDSNMQVTKEGYLTVKAPVTRPGVFPYQRADGS
                     IQLEAKLPENLFASETIQSLNAKPVTNDHPNEPVNASNHQKYAKGTTHTDACVSDNKL
                     FVSFTITDSKTIQAVQDGKRELSLGFESEVVKESGTYAGERYDAVQKSVLVNHLAIVD
                     EGRVGPEIAIRGDSAAFMIDSKNTKKQGGNKMPVLKIDSKEYEVDSVVKSRFDALEAK
                     LDAANAKAAKVDALEGERDGLKTKLDKAESDLEEANKNTMTEEDIENAVTERAALLDS
                     AKVMLGDSFDFKGKTAREIKEAAIKTSNDSFDSKDKSDEYVNAFYDAMTVTADAKGYT
                     ADANFNKGKPDPKELEEIEKKKAARQNFGKKGDNK"
     gene            1670..2122
                     /locus_tag="U0308_001752"
     CDS             1670..2122
                     /locus_tag="U0308_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316715.1"
                     /translation="MSIPTGQEYMMPELGLGKIASYQRSQVDSAAVKANIKFGQAVQV
                     LDDEASPLEATGDFYGVAVAKNYVDEYTDDKVGVYKPSEAVPVLRQGTITVIVDEDVK
                     SGEKAVVNTDTSNFLPSTTAKTTKTGVIGVFKSTTSKDGLAKLEINLP"
     gene            2143..3048
                     /locus_tag="U0308_001753"
     CDS             2143..3048
                     /locus_tag="U0308_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="encapsulin"
                     /protein_id="HEM2316716.1"
                     /translation="MPGKITATIEARDLQAIDNVIYEPKQEELTARSVFPQKFDVNEG
                     AESYSFDVMTRSGAAKIIANGADDLPLVDVDMVRKSVPIYSIGIGLSYTVQDLRAARM
                     QGTTVDAAKAATVRRAIAEKENSIAFRGEKKYAIKGAFEATGIQIDVSPTTGVGNVSK
                     WEKKTAEQIIDEIGAAHTKITVLPGYGTASLKLCLPPKQFELINKKRYSNEDSRSVLK
                     VLQDNAWFSAIVRVPDLAGMGTSSSDSFAVIHDSNETAELIIPMDITRHPEEYSFPRT
                     KVPFEERTAGVVVRFPAAIVRVDGI"
     gene            3071..3457
                     /locus_tag="U0308_001754"
     CDS             3071..3457
                     /locus_tag="U0308_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316717.1"
                     /translation="MIIENKGDYVRFLGKVRLVPGTNNIDNEHAEELEQALKHPLNIH
                     LIESDELKVPDNLQQDSSLNDFNATKAALLVKDTFDLGALNEFLAEETTNGNRKTVID
                     AINKQIESISNPPQEERYVPEEDFGK"
     gene            3469..3804
                     /locus_tag="U0308_001755"
     CDS             3469..3804
                     /locus_tag="U0308_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4054 domain-containing protein"
                     /protein_id="HEM2316718.1"
                     /translation="MKTDVSKLKLTASALASVSDDSLQVHIDDSYLEVQEKGFPEKFE
                     ERANRYLAAHLATLANKNVKSEAVGSLKREYYEVKGDSGLLSTEYGQEYARLLKEANG
                     GSGISMVVV"
     gene            3804..4403
                     /locus_tag="U0308_001756"
     CDS             3804..4403
                     /locus_tag="U0308_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316719.1"
                     /translation="MKVTTDKSTMNKAIRELDQLDRYSLQIGLFGEDDSFIQMIAGVH
                     EFGLTIRPKGKYLTIPTPEAGDRRARDIPGLFKPRGKNILAVAGPDGKLTVMFYLKKE
                     VNIPERSFLRSTFDEKSNKWGELFEGWIDDIIHGKLSAEQVYNRLGAKIVDDIQMKIV
                     EIQTPAKSAATLARNPRKNNPLIVTGKMKNSVTWKVMKS"
     gene            4403..4777
                     /locus_tag="U0308_001757"
     CDS             4403..4777
                     /locus_tag="U0308_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316720.1"
                     /translation="MEKMVFQSLLDSFGVPLTVLKKQEKGGEFVNGEWVVSQLDETSK
                     IEVNEPFVPSSLMTQMPQTSAYMAARYEKYEMIWFSSQVLPLKSKVIHKGISYSVEDA
                     IPFTDYSDVTQYGCKAVSVSAK"
     gene            4767..5249
                     /locus_tag="U0308_001758"
     CDS             4767..5249
                     /locus_tag="U0308_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316721.1"
                     /translation="MPNDGYDYGILVKTLIGAVNELSGGLQLIESASGGEQPEYPFCQ
                     YTITSPYIAISPDIVEGEQFEIVISLTWRALSGHQALNLANITNKYFRSQKGRFFMQE
                     NGGIVVVSVQNSGLRDTFISIEYERSAGIDLRLRVVDSYSSEIQEIDNISFTNENLGG
                     "
     gene            5254..6249
                     /locus_tag="U0308_001759"
     CDS             5254..6249
                     /locus_tag="U0308_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3383 family protein"
                     /protein_id="HEM2316722.1"
                     /translation="MVETITDVRVHISVLYPSPRIGLGRPAIFVKGTAMGYKEYTTLE
                     ELKDTFADTTEVYAKAKAVFLQKDRPDTVAVITYEDTKLLEAAEAYFLKSWHFALLAE
                     FKAADALALSNLIEEQKFKFAVFQVTAVADITPLAKNTRTIAIVHSKTGEKLDAALIG
                     NVASLPVGSATWKGRHGLTGITSEELKVSEIDAIQKVGGMCYIEKAGIAQTSEGKTVS
                     GEFIDSIHGDDWIKATIETRLQKLLTETDKLTFDARGIALLQSELTTVLNEGFANGII
                     DSNDETGEPNFSITALQRSDLNDDDIAKRNYKGLSFRYKRSGAIHSVDVYGEVEV"
     gene            6266..6664
                     /locus_tag="U0308_001760"
     CDS             6266..6664
                     /locus_tag="U0308_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316723.1"
                     /translation="MSEVMATYDANTVSTIINGISIFGFSDGDMVSCSKDSNNVEIKS
                     DAQGNSSAAVNNDKMGTIKVDLAQTSPCYPKLIDIANRQLKVPIYVINGKEKIGGSMA
                     FIEKLPDAGFGKSVGTRSFTFKVLDYTHTA"
     gene            6717..7073
                     /locus_tag="U0308_001761"
     CDS             6717..7073
                     /locus_tag="U0308_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316724.1"
                     /translation="MAEKKNNATKSDVAAAQAAQKIPKAEKKPLDKFGKKEVFKASDK
                     VEYTFQFPGTRAAQAILDESKNGYGVIVDSVYYERIMKDVIVEPLGLDLDYWDEHEGY
                     REVMNAADNFLGGLLN"
     gene            7250..12280
                     /locus_tag="U0308_001762"
     CDS             7250..12280
                     /locus_tag="U0308_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEM2316725.1"
                     /translation="MSGALRKTTIEIDWKINNQMLQKADEETDRIVRSADKMERNFNQ
                     SARSVDGTTRAIHKQSNEVRESATRVDKLDKNFKEAKNSANQFGNSAKGAVDKTKNSV
                     DSAKNSVNKLDNEIDKTTKNANSKFSALKTTIIAVGSALLVAGGKAMFNYASDTNESL
                     NKVDVAFKGNAKNVKRWSKTTLDNIGLAQGTALDLAATYGDMSTSMGLNTQEAEKMST
                     SMVDLAGNLASFKNIDIDRANTALNGVFTGETEALKSLGIVMTQTNLEQFALETGAGK
                     VAKSSTEVTKQNIAREKAQKKLNEAIKEHGKNSLEAREAQNKLQEIQAKTSESAKVNL
                     KDMKQDELVRLRYNYVMKQTTNAHGDFKNTSDQAANASRVFSESVKELASNAGQFLLP
                     VITPLIIKASDFTKKLSDIPSAVKGMKEKFKPAFEVFESVGDFFKKDLIPSAKELAKS
                     MGPGFIEGGVLAFKGLGIVLNTTVIPAFKAVTKFTRENPDSMKRIAKYATVGVAGFLG
                     FKLVKNTIDKVTVAIGKMNSKLLSIGPSAAAGATEANVAMSTIGTTTNGAGGVVLPGG
                     KGKGKIKLFSKATAGLKSMGKFGKLASGVGVLGVGLSATELIGMNKDNAGEKTGGFGG
                     SLGGMAGGAAIGTAIAPGIGTAIGGAIGAFAGTALGKELGKYVQKEGPKILDKFKTGW
                     KGLSKIAEEHPILGANINVINKTIDAAKKGIKAVGDTHKAVWNISKAMVADPLKIDAG
                     GKGVSKDSAKAMNKYLSAEQKLQNDSTSRIVDGKSISGNEYKENMKTHDNMSIQLVNA
                     TDKKSVKANNDWDRLVASGAVSKDVASAKKHTNNETASINKADIKKNTEELKRLEKSR
                     FEEQRKIEENAAGAILKIKENAKKKGVKLSKEEKVEIEQINKDKVTAIQVSESTYSKK
                     SAEIQKKQRKEATIALSKSAKEQKIILGNLENSKSEMSAKAAASVVKNSAKQRNATVK
                     EANKEFKDTKRILDEKRFVTGEIGEKEYREAIKQAKKKKDGTIDEAEKMHKEVVNQAQ
                     KQAKGHLKEVDWETGETLSKWDQFKKATSETFNSIKDAALGKWNELSSATVNIFGGMK
                     DASLRVWDSFKTNLYKMVNNVITAVNKVLSFFSIGSIPLLGNGNIGASQENKLSAKDK
                     KTYHSTSQSGNLAMNYTGSDSAAGQIMAGEEGFEIAYNKNSAQARILGKNGPEITTVA
                     PGTKILNHAESKKMMSGGMGAGTVLPGFAKGTNGAVESLKSLGSNAIDSVKNAGNKVK
                     DIASSAWDFATDPVAGVNKLMAKYNKLPNNSPMANMAGGMFKYFGKGAGDWLKEKLAD
                     VFMTSDGGGEGGGMFSPHFGSPFRMTSGYGPRTVFGKQEFHKGIDYGAPTGTPLPAQY
                     GGKVSRAGTAGGFGNLVSITAGKGIENLYGHLSKILTSAGSVVKAGQIIGLVGSTGRS
                     TGPHVHYQVNQNGKPVNPSSSLGGGSFNGKGGSKAVNGWVQQAIGLTGVPASWSNALA
                     TIAMKESNGNPNAVNNWDINAKRGMASQGLMQTIPATFNAYKMKGHGNILNPVDNIIA
                     AIGYIKARYGTVFNVPGIKALASGKAYKGYKRGGRPPVNETVLVGEEGPELFETDTAG
                     TVHTAQKTKQMLNKSSSGTTINFNPTINITVEGGSSESESSIRKTVRAEMEKLFEKLV
                     GIYSPGEV"
     gene            12286..12834
                     /locus_tag="U0308_001763"
     CDS             12286..12834
                     /locus_tag="U0308_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM2316726.1"
                     /translation="MVATIGSVKLVNTNESESSPFTITDNPVETGSPVSDHVQRETKT
                     LEISGFLLGATAEKDYATLKSYAEKGTIVSFRGRVYFKNVLISNLSKSYNTIKNGFEI
                     TVSLRDLRRASTPWVRKKKKSSGKKQSVKSKKSPGTYITVKKGDCYWKWWKRYGTSIA
                     QLRKWNKWPDRRIPIGKRARVK"
     gene            12834..13205
                     /locus_tag="U0308_001764"
     CDS             12834..13205
                     /locus_tag="U0308_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316727.1"
                     /translation="MAIRNYIPVELDNIPELFEFDFDDGKSFLFGINYAESQDLFSVD
                     LYSIEGEPIALGERLVLNERLWADIIDDRLPSVDLVPLDESGKETKITKDNFTKTVFL
                     YFDDLAPEMELPTLDNEVSMI"
     gene            13211..14017
                     /locus_tag="U0308_001765"
     CDS             13211..14017
                     /locus_tag="U0308_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316728.1"
                     /translation="MLWMREIYVHINNGSEYATIHEKNEASGSLKINFSIPFSDEPKP
                     AECEVVIYNLSRNSSNKIKKGSTISVTAGYQGDKGLLSQGKVTKVSTVPSGVDKITTI
                     KFSEGVDYSDKKDVNITFKKGTSAKSIIQRIATKAGIKIYQIKLPTNKIYKSGYTADG
                     DALSVIEEIVKDCKAAIYYRRGNLVIRSIKSGDDERFTLNSSTGLISSPERLENDEYS
                     GWSFQSLLQHRIATASIITLKSKTVNGTFRVKNGMHNYDGSTFTTQCEVV"
     gene            14018..14356
                     /locus_tag="U0308_001766"
     CDS             14018..14356
                     /locus_tag="U0308_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316729.1"
                     /translation="MAQDTKFFDSFIRLVNSSVSVLLMCRVVNYDASNKRADVQPLNL
                     KPNGAKRAMILDALVLKHTEEDISEGKIVAIVFSDCELDNINGSTDFKPESSRQHSVN
                     DAVVVGVWDV"
     gene            14353..14715
                     /locus_tag="U0308_001767"
     CDS             14353..14715
                     /locus_tag="U0308_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2634 domain-containing protein"
                     /protein_id="HEM2316730.1"
                     /translation="MKDLLIDSNGDIVVSDNDILMTDGVNDIVQCVRMILQTREGEFY
                     FDENSGMNHENLFTKKPNFDYIKQDVITAIEEQEERISSVDSVLFDFDKDTRKLHVSI
                     KMTGLDGPVSVEEVILNA"
     gene            14708..>15777
                     /locus_tag="U0308_001768"
     CDS             14708..>15777
                     /locus_tag="U0308_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HEM2316731.1"
                     /translation="MLDEHGFKRKTYDELLTDMESKAKELFGEDINLSSHSALGVFLR
                     IIAWFMSLIHELAERVYNSGFISSADGVQLDRLGSNISVLREPAMPAVVTLELTGNAG
                     YTIEEGVQFKTKNDVVFEMIDVVTLDDKGHGIGQAISQIYSDKANVPANSITVVAEPS
                     EDILTVNNPNKADGGSEKENDTSYRARIRLATSASPGPPVNGIISALNQVSGVRSVSI
                     IENNSIDLDAYNNPAKSVHIYCLGGIDEEIGEAIFNSVAAGIQTVGKVTVKVKDLSGF
                     EHSVYYDRATSLSIYAHIIVDVNSKFEDDGGDVIKQAVLNYINSLNMGEMVIHSYIYP
                     DLYQIPGITVANVKLGKDINNLA"
BASE COUNT         5560 a         2502 c         3536 g         4179 t
ORIGIN      
        1 gcgaaatata aatcttggga aaataagagt tttactattt ctactcagat agagaagaaa
       61 gttgcaaagt gggatgaaat aaatgaattg ttcagtcatg aaaaatgggc aaacgatgat
      121 tactttagcg atatttgttc ggcacttacg gaaaatagag taaaaggtaa tgcaggacat
      181 gccgcttctt actggaatcg aaaagggagc attgaaaaag agatttttgc aaatttattt
      241 gctatgctag caatgaacaa acaagaatca attgctatgg taaaaaaaca atttccgatg
      301 atttatggat cgtttattaa aatgttagaa ggtgaattga agtgattaac tacaaaaaat
      361 ggcttgatag catgatgtct actgaagatg gaaaaatact ttttgaacgt tataaaaaac
      421 tttatggcca ttatccgccg ttcttacttg acgctacaga aaaagaacag tgggatgaaa
      481 ttaaacgatt gataaaagac gctgataaat gattcagtgt cttttttatg ccaaaaattg
      541 aaaggtggtg agaatatgaa atgaaggtgc aacgatttga taaatcattt attacagatt
      601 caaatatgca agttactaaa gaaggttact taactgttaa ggcgccagtc acgcggccag
      661 gggtatttcc ttatcaacga gcggacggca gtattcagct tgaagccaaa ttacccgaaa
      721 acctttttgc tagcgaaact attcaatcgc tcaatgcaaa gccagttact aatgaccatc
      781 cgaacgaacc agttaatgca agcaatcatc aaaagtatgc aaaaggaaca acgcatacag
      841 acgcgtgcgt aagtgataat aagctatttg tatctttcac tattacagac tctaagacaa
      901 tacaagctgt tcaagacggt aaacgcgaac tgtcccttgg ctttgaatcg gaagtagtaa
      961 aagaaagtgg tacttatgca ggcgaaaggt acgatgccgt gcaaaaatct gtattagtca
     1021 atcatttagc aattgtagat gaaggacgcg tgggtcctga aattgcaata cgaggcgact
     1081 cagctgcttt tatgattgat tcaaaaaaca cgaaaaaaca aggaggaaac aaaatgccag
     1141 tactaaagat tgatagcaaa gaatatgaag tcgattcagt tgttaagtca cgatttgacg
     1201 cattagaagc aaaactggat gcagcaaatg ctaaagcagc taaagttgat gcattagagg
     1261 gagaacgtga cggattaaaa acaaagttag ataaagcgga aagtgatctg gaagaagcta
     1321 acaaaaatac aatgacggaa gaagatattg aaaatgcggt cacagaacga gctgcattat
     1381 tagattctgc taaagtgatg cttggtgatt catttgattt caaagggaaa actgctcgtg
     1441 aaattaaaga agccgctatt aaaacatcga atgattcatt tgattctaaa gacaaatcag
     1501 atgaatatgt taatgctttt tatgatgcga tgacagttac agcagatgct aaaggatata
     1561 ctgcagatgc taactttaat aaaggcaaac ctgatccaaa agagttagaa gaaattgaaa
     1621 agaaaaaagc ggcgcgacaa aattttggta agaaaggaga taacaaataa tgagtattcc
     1681 aaccggacaa gagtatatga tgcctgagct aggtttaggt aaaattgctt cttatcaacg
     1741 ttcgcaagtt gatagcgcag cagtaaaagc aaatattaaa ttcggccaag ccgttcaagt
     1801 tctcgatgat gaggctagcc cgttggaggc tacaggtgat ttttatggag tcgctgtggc
     1861 aaagaactac gtagatgagt atacagatga taaagtaggt gtttataaac cttctgaagc
     1921 ggtgccggtg ttacgacaag ggacaattac agttattgtg gatgaggatg tgaaatctgg
     1981 agaaaaagca gttgttaata cagatacctc taatttctta ccttctacaa cagcaaaaac
     2041 aactaaaaca ggtgtaattg gtgtatttaa atcaacaaca tctaaagatg gattagcaaa
     2101 attagaaatt aatctgcctt aaaggcaaaa ggaggaagaa caatgccagg aaaaattaca
     2161 gcaacaattg aagcacgtga cttacaagct attgacaatg ttatttatga accgaaacaa
     2221 gaagaattaa ccgcacggag cgtattcccg caaaaattcg atgtgaacga aggcgcagaa
     2281 tcgtattcat ttgatgttat gacacgttcc ggagctgcta aaataattgc gaacggagca
     2341 gatgaccttc cacttgttga tgtggacatg gtacgtaagt ccgtacctat ctattctatc
     2401 ggtattggat tgtcctatac agtacaagat ttgcgtgctg ctcgtatgca aggaactaca
     2461 gtagatgctg caaaagcggc aacagttcgt agagcaattg cagaaaaaga aaactctatt
     2521 gcttttagag gagaaaagaa atatgcaatc aaaggggcat ttgaagctac aggcattcag
     2581 attgatgtat ctccgacaac cggagtagga aatgtttcca aatgggaaaa gaaaaccgca
     2641 gaacagatta ttgatgaaat tggagcggct catactaaaa ttactgtttt gccgggatat
     2701 ggtacagctt cactaaaact atgcttacca ccgaagcaat tcgaattaat taataaaaaa
     2761 cgttacagta acgaagattc tcgctctgta ctgaaagttc tacaggataa cgcttggttt
     2821 tctgctattg ttcgtgtgcc tgatttagct ggtatgggta cttcgagttc tgacagtttt
     2881 gcggtaattc atgactcaaa cgaaacagcg gagttaatta ttccgatgga tattactcgt
     2941 catccagaag aatattcttt cccgcgcacg aaagttccgt ttgaagagcg cacagctggc
     3001 gtagtggttc gattcccagc cgctattgtt cgtgtcgatg gtatttaaga attactagga
     3061 ggaataaaca atgattattg aaaacaaagg tgactacgta cgttttttag gaaaagttag
     3121 attagttcca ggaacaaaca atattgataa tgaacatgct gaagaattag aacaagcgct
     3181 taaacatccg cttaatatac acttgattga gtcggatgaa ttaaaagtac ccgacaattt
     3241 acaacaagat tctagcctta atgatttcaa tgctacgaaa gcggcattgc tagtcaagga
     3301 tacttttgat ttaggagcct taaacgaatt tttagcagaa gagactacaa acggaaatcg
     3361 gaaaactgta atcgatgcta ttaataagca aattgaatca attagcaatc cgccacaaga
     3421 agaacgatat gttcctgaag aggattttgg taaatgagga ggtaactcat gaaaacagac
     3481 gttagtaagc tcaaattaac ggcatcagca ttagcaagcg tctccgatga ttctctacaa
     3541 gtacacattg atgattcata tttagaagta caagaaaaag gatttcctga aaaattcgaa
     3601 gaaagagcaa atagatacct tgctgcacat cttgcaacat tagcaaataa aaatgttaag
     3661 tcggaagcag taggttctct aaaacgggaa tattacgaag ttaaaggaga ttctgggctg
     3721 ttatctacag agtatggtca agaatatgca agattgctta aggaagcgaa cggtggatca
     3781 ggaattagca tggtggtggt ttgatgaagg taactactga taaatctaca atgaacaaag
     3841 caattaggga gctggatcag ctagaccgtt atagcttgca aatcgggctt tttggtgaag
     3901 atgattcttt tattcaaatg attgctggtg ttcacgaatt cggtttaacc atacgcccga
     3961 aaggcaagta tctaaccata ccaacaccag aagctggtga taggagagcg cgagatattc
     4021 ctggtctatt taaaccacga ggtaaaaata ttcttgctgt agcaggtcct gatggtaaat
     4081 tgacggtcat gttctattta aagaaagaag ttaatattcc ggaacgttct tttttgaggt
     4141 ccacatttga tgaaaaaagc aacaaatggg gagagttgtt tgagggatgg attgatgata
     4201 ttattcacgg gaaattaagc gccgagcagg tatataaccg attaggcgcc aaaattgtgg
     4261 acgatataca aatgaaaatt gttgagattc aaactccggc caaatcagca gcgaccttgg
     4321 ccagaaaccc cagaaaaaac aatcctttaa ttgtcaccgg taaaatgaaa aatagtgtta
     4381 cttggaaggt gatgaagtca taatggaaaa aatggttttc caatcattac tggacagctt
     4441 tggtgttccg ttgacagttc ttaaaaagca agaaaaaggt ggagaattcg ttaacggcga
     4501 gtgggtagta agtcagcttg acgaaacttc taaaattgaa gttaatgaac ccttcgttcc
     4561 aagttcgctc atgactcaaa tgccccaaac atctgcatac atggctgcta ggtatgaaaa
     4621 gtacgagatg atttggtttt ctagtcaagt tctgccgtta aaaagcaaag tgatccataa
     4681 aggaatatcg tattctgttg aggatgcaat tcctttcaca gattactcag acgttactca
     4741 gtatggatgc aaggcggtga gcgttagtgc caaatgatgg ttatgattat ggaatacttg
     4801 ttaaaacctt gattggtgct gttaatgagc tttctggtgg tttacaactt attgaaagtg
     4861 ctagtggtgg agagcaacca gaatatccgt tttgccaata caccataaca tctccttaca
     4921 ttgctatcag tcctgatata gtggaagggg agcaatttga gattgtaatc tcgcttacat
     4981 ggcgagcttt atctggccat caagccttaa atttggccaa cattacaaat aagtatttcc
     5041 gctcccaaaa agggcgtttt tttatgcaag aaaatggggg tattgttgtt gtcagtgttc
     5101 aaaacagcgg gctacgtgat actttcatta gcattgaata tgagcgctca gcaggcattg
     5161 atttgcgatt gcgtgtagtg gattcgtatt caagtgagat acaagaaatt gataatatca
     5221 gttttacaaa tgagaatcta ggaggataaa aaaatggtag aaactattac agatgtaaga
     5281 gtacacattt ctgtattgta tccgtcacct cgcattggac ttggtcgtcc tgcgattttt
     5341 gtcaaaggga cagcgatggg ttacaaggaa tacactactc tcgaagaatt gaaagatacg
     5401 tttgcagata ctacagaagt ctatgcgaaa gcaaaagcag tgtttcttca aaaagataga
     5461 cccgacacgg tggcagtcat cacttacgag gatacgaaat tattagaagc tgcagaagct
     5521 tatttcttga aatcttggca ttttgctttg cttgcagagt ttaaagctgc ggatgctctt
     5581 gcattatcaa acttgatcga agaacagaaa tttaaatttg cggtgttcca agttacagct
     5641 gtcgctgata ttacaccact tgcaaaaaac acacgtacta tagcaattgt tcacagcaaa
     5701 actggagaaa aactagatgc agcgctaatt gggaatgtag caagtttgcc ggttggttcc
     5761 gcaacatgga aaggccgtca tggacttaca ggaatcacat cagaagagct aaaagtatct
     5821 gaaattgatg caattcaaaa agtgggaggc atgtgctata tcgaaaaagc aggcattgcg
     5881 caaacttcgg aaggaaaaac cgtttcaggc gaattcatcg actccattca tggtgatgat
     5941 tggatcaaag caacaattga aactcgtctt cagaagttgc ttacagaaac agacaaactt
     6001 acttttgatg cacgaggtat tgcgctactt caaagtgagt tgactactgt cttaaatgaa
     6061 ggttttgcga acggaatcat tgatagtaat gacgagacgg gggagcccaa tttttctatt
     6121 actgcgcttc aacgttcaga tttaaatgat gacgatattg ctaaacgaaa ctataaaggg
     6181 ctatcattcc gctacaaacg ttccggagct attcattccg tggatgtata cggcgaagtg
     6241 gaagtataaa aggaggaata agataatgag tgaagtaatg gcgacatatg atgcaaatac
     6301 agtatcgaca attatcaacg gaatttctat ttttggtttt tctgatgggg atatggtttc
     6361 atgctctaaa gattcaaaca atgtagaaat taaatcagac gcacaaggta attcgtcagc
     6421 agctgttaat aatgacaaaa tgggtacgat caaagttgat ttagctcaga catcaccttg
     6481 ttatccaaag ctgattgata tagcaaatag acagctaaaa gttcctattt acgttattaa
     6541 tggaaaagaa aaaattggtg ggtctatggc ttttattgaa aaattaccag acgcaggttt
     6601 tggtaaaagt gttgggacaa ggtcatttac tttcaaagta ctagattata cacatactgc
     6661 ataaaatata ttatactaag cgaccttttt ggtcgctttt ttaggaggaa acaacaatgg
     6721 cagagaagaa aaataatgca actaaaagtg atgtagcagc agctcaagca gcacaaaaga
     6781 ttccgaaagc agaaaaaaaa cctttagata aatttggaaa aaaagaagtg ttcaaagcta
     6841 gcgacaaggt tgaatacaca ttccagttcc ctggaactcg cgctgcacaa gcaatcttag
     6901 acgagtctaa gaatggctat ggcgtaatcg tggattctgt atattatgag cgaattatga
     6961 aagatgtaat tgttgagcct ttgggtttgg acttagatta ttgggatgaa catgaaggtt
     7021 atcgcgaggt tatgaatgca gctgacaact ttcttggtgg attgcttaac taagtttcct
     7081 accgctcgac aagctgaacg ggaagtcaat aaagagtttg atatttggct tcctataatc
     7141 gccggtatag caacgaaaga agaagttgag gttgctacat catatgaatt agcaatctta
     7201 tgtgaggttg caagacaaaa aatagaacta atgaagggtg gtgtctgata tgtcaggcgc
     7261 attgagaaaa acaacaatcg aaattgattg gaaaatcaat aatcaaatgt tgcagaaagc
     7321 tgatgaagaa actgatcgca tcgttcgctc tgcggacaag atggaacgga acttcaatca
     7381 atctgctagg tctgttgatg gcaccacccg tgctatacat aaacagtcaa atgaagtgag
     7441 agagagtgcg actcgagtag ataagcttga taagaatttt aaagaagcaa agaactcggc
     7501 taatcaattt gggaattctg ctaagggcgc agttgataaa actaaaaact cggtagactc
     7561 agcaaagaat agcgttaata agttagataa tgaaattgat aaaactacta aaaatgctaa
     7621 ttctaaattc agcgcactaa agacgactat tattgcagta ggtagcgctt tgttggttgc
     7681 tggtgggaaa gcaatgttta attatgcatc agatacaaat gagtcgttaa ataaagtgga
     7741 cgttgcattt aaaggaaatg ctaaaaatgt caaacgttgg tctaaaacaa ctctggataa
     7801 tatcggtctt gcgcaaggga ctgcactaga tttggctgca acttacggtg atatgtcaac
     7861 atcaatggga ttgaatacac aagaagctga gaagatgtct acttctatgg tcgacttagc
     7921 cgggaactta gcatcattta agaatattga tattgataga gcgaatacag ccctaaacgg
     7981 cgtattcaca ggtgaaactg aagcactaaa aagtttaggt attgtaatga cccagactaa
     8041 cttagaacaa tttgctttag aaacaggtgc aggaaaagta gctaaaagta gcacggaagt
     8101 tacaaagcaa aatattgcac gtgaaaaagc acaaaaaaaa ttaaacgaag cgataaaaga
     8161 acatggtaaa aattcattag aagcaaggga agcacaaaat aaattacagg aaattcaggc
     8221 taaaacaagc gaaagcgcaa aagttaattt gaaagacatg aaacaagatg agctagtacg
     8281 tctacgttat aactatgtta tgaaacagac tacaaacgcg cacggagatt ttaaaaacac
     8341 tagtgatcaa gccgcaaacg caagccgcgt attttctgaa tcagtaaaag agctagcatc
     8401 aaacgctggc cagttcttgc tgccagttat tacaccattg attataaaag ctagtgattt
     8461 cacgaaaaaa ctttcggata tcccaagtgc tgtgaaaggg atgaaagaga aatttaagcc
     8521 agcgttcgaa gtgtttgaat ccgtcggcga ctttttcaaa aaagacctta ttccaagtgc
     8581 gaaagagctg gcaaaaagta tgggacccgg gttcatcgaa ggcggtgttt tagcatttaa
     8641 agggctaggg atagtattaa acactactgt tattcccgct tttaaagcag ttactaaatt
     8701 tacgcgtgaa aatccggata gcatgaaaag aattgctaag tatgcgactg ttggtgtggc
     8761 aggtttttta ggatttaagt tagtaaaaaa cactattgat aaagtaacag ttgctattgg
     8821 aaaaatgaac agcaaactat tgagcatcgg accaagtgca gcagctggtg cgacagaagc
     8881 gaacgttgca atgtcaacta tagggacaac aacgaatggc gcgggcggag ttgtattacc
     8941 tggcggaaaa ggaaaaggga aaattaaact tttcagtaaa gctacagcag ggctcaaaag
     9001 catggggaaa ttcggcaagt tagcatcagg agttggtgta ttaggggtcg gattaagtgc
     9061 tactgaactt attggaatga acaaagataa tgcaggtgaa aaaactggcg gttttggagg
     9121 ctcgttaggg ggcatggctg ggggcgctgc aattggcaca gctatagccc caggtattgg
     9181 tactgcaatt ggaggggcaa ttggcgcttt tgccggaact gcattaggta aagaattagg
     9241 gaaatatgtt caaaaagaag gaccaaaaat attagataaa ttcaagacag gctggaaagg
     9301 cttaagcaaa attgctgaag agcatccgat tcttggggct aatataaatg taataaataa
     9361 aactatcgat gcagcaaaaa aaggcattaa agcagtagga gacacacata aagctgtttg
     9421 gaatatctcg aaagcgatgg ttgcagaccc tctcaaaatc gatgcgggtg gaaaaggcgt
     9481 ttctaaagac tctgccaaag caatgaataa atatttaagc gctgagcaaa aacttcaaaa
     9541 tgatagtaca tctagaatag tagacggaaa atctataagt ggaaatgaat ataaagaaaa
     9601 tatgaaaaca catgacaata tgtctattca gcttgttaat gcaactgata aaaaatcggt
     9661 taaggcgaat aatgattggg atagattagt cgcgtcggga gctgtttcca aagatgtggc
     9721 tagcgcgaag aagcacacta ataatgaaac ggcatcaata aataaagctg atattaagaa
     9781 aaacacagag gaattaaaga gattagaaaa aagtagattt gaagagcaga gaaaaataga
     9841 agagaatgct gctggagcaa tcttaaaaat caaagaaaat gcaaagaaaa aaggagttaa
     9901 actttcaaaa gaagaaaaag ttgaaataga acaaattaac aaagataaag taacggcaat
     9961 tcaagtaagc gagtctactt actctaaaaa aagtgctgag attcaaaaga aacaaagaaa
    10021 agaagctaca atagcgcttt ctaaatcagc aaaagaacaa aagataatac tagggaattt
    10081 agaaaactct aaaagcgaaa tgtctgcaaa agctgctgct tctgttgtga aaaattctgc
    10141 aaaacaacgc aatgctactg taaaagaagc caataaagaa tttaaagata cgaaaagaat
    10201 tttagatgaa aaaagatttg ttacggggga aataggcgag aaagaatatc gtgaggcaat
    10261 aaaacaagct aagaagaaaa aagatggcac aattgatgaa gcagaaaaaa tgcacaaaga
    10321 agtagttaat caagctcaga aacaagcgaa aggacatttg aaagaagtcg actgggaaac
    10381 aggggaaact ctaagtaaat gggatcaatt taaaaaagcg acatcagaaa cgtttaacag
    10441 tataaaagat gcagcacttg gaaaatggaa tgagttgtca tctgcgacag ttaatatttt
    10501 cggtggaatg aaagatgcat ctttacgcgt gtgggatagt tttaagacta atttgtacaa
    10561 aatggttaac aatgtgatta cagctgtcaa taaagtactg tcgttcttta gcattggttc
    10621 aatacccttg ttaggaaacg gaaatattgg agctagtcaa gaaaacaagt tgtcggcaaa
    10681 agataaaaaa acatatcatt ctacttcgca atcaggaaat ttggctatga attatacggg
    10741 ttctgatagt gcagctggtc agatcatggc tggtgaggaa ggttttgaga tagcttataa
    10801 caagaactca gcacaagcaa gaatccttgg taagaatgga ccggaaatca ctacagtagc
    10861 ccctggaaca aaaatcctca atcatgctga gtctaaaaaa atgatgtccg gcggaatggg
    10921 cgcaggaacg gttttacctg gctttgcgaa agggacaaat ggagcagtag agtcactgaa
    10981 aagccttggt tcaaatgcaa tagatagtgt caaaaacgca ggtaataaag ttaaggatat
    11041 tgcatcttct gcttgggatt tcgcaactga tcctgtcgct ggagttaaca agttgatggc
    11101 gaaatataat aagttgccta ataattcacc tatggcgaac atggccggcg gaatgttcaa
    11161 atattttggt aagggcgcag gcgattggtt gaaagaaaaa cttgctgatg tctttatgac
    11221 atctgatggg ggcggagaag ggggcgggat gttttctcct cactttggtt caccatttag
    11281 aatgacgtcc ggctatggac cgcgaacagt gtttggaaaa caagaatttc ataaagggat
    11341 agattacgga gctccaacgg gtacacctct tcctgctcaa tatggcggga aagtaagtcg
    11401 cgcgggcaca gctggcggtt ttggtaattt agtatctatt acggctggga aaggtataga
    11461 aaacttatat ggtcatctct ctaaaatctt aacttctgct ggttctgttg tcaaagcagg
    11521 tcaaatcatc ggtttagtag gtagcacagg gcgctctact ggtccacatg tacactatca
    11581 agtaaaccaa aacggtaaac ctgtaaatcc tagtagtagt cttgggggtg gctcatttaa
    11641 tggaaaaggt ggctctaaag cagttaacgg atgggttcaa caagcaattg gtcttacagg
    11701 cgttcctgct agctggtcaa acgcattggc cacaattgca atgaaagaat ctaacggaaa
    11761 cccgaacgcg gttaataact gggatattaa cgccaagcgc ggcatggcct cacaaggtct
    11821 tatgcagacg attccagcga cattcaacgc gtataaaatg aaaggtcatg gtaatatctt
    11881 aaatcctgta gacaacatca tcgctgcaat aggatatatt aaggctcgat atggaactgt
    11941 attcaatgta cctggtatta aggctttggc ttcaggcaag gcttacaaag gatataagcg
    12001 tggcggacgg ccaccggtta atgaaactgt tttggttggt gaagaaggac ctgagctatt
    12061 tgaaactgat acggccggaa cagtccatac agctcaaaaa acgaagcaga tgttaaacaa
    12121 aagttcgagt ggaacaacta taaacttcaa tccaactatc aatataactg ttgaaggtgg
    12181 atcaagcgaa agcgagtcgt ctattcgtaa aactgttcga gcggaaatgg aaaaattatt
    12241 cgaaaaactt gttggaattt atagtcctgg ggaggtgtga tatttatggt agcaacaata
    12301 ggttctgtga aattagtaaa tacaaacgaa agtgagtctt ctccgtttac tattacagat
    12361 aatcctgtag aaacgggttc gcctgtctct gatcacgttc aacgcgaaac taagacacta
    12421 gaaattagcg gttttttgct aggagctact gctgaaaaag attatgctac tttaaaaagc
    12481 tatgcagaaa aaggcactat agtatcattt agaggtcgtg tatactttaa aaacgtgcta
    12541 atcagtaatc tatcaaaaag ttataataca ataaaaaatg gttttgagat tacggtatca
    12601 cttagggatt taaggcgcgc atcgacgcct tgggtaagaa agaaaaagaa aagttctggg
    12661 aaaaagcaat ctgtcaaatc aaaaaaaagt cctggcactt atataacagt gaaaaaaggc
    12721 gactgttact ggaaatggtg gaagcgatat ggtacaagta tcgctcagct caggaagtgg
    12781 aataagtggc cagacaggcg tattcctatt ggtaagagag cgagggttaa atagtggcta
    12841 ttagaaatta tataccagtg gaacttgata atattccgga acttttcgaa tttgatttcg
    12901 atgatggcaa aagtttttta ttcgggatta attatgcaga atcacaagat ttgttttctg
    12961 tcgatttata tagtattgaa ggggaaccaa tcgctctggg agagcgacta gtattaaacg
    13021 aacggctttg ggcagatatt atagacgata gactcccttc tgttgaccta gtacctttag
    13081 acgaatctgg gaaagaaact aaaataacga aggacaactt cacgaaaacc gtgtttttgt
    13141 attttgacga tcttgcgcca gaaatggaat tgccaacgtt ggataatgag gtgagtatga
    13201 tatgactcaa atgctgtgga tgcgcgaaat ttatgtgcat ataaacaacg gaagtgaata
    13261 tgctactatt catgaaaaaa atgaagcttc aggaagttta aaaattaatt ttagtattcc
    13321 tttctccgat gaacccaaac cagcggaatg cgaagttgtt atatataact tatctcgcaa
    13381 ctcatctaat aaaataaaaa aaggttctac tatttcggtt acagctggat atcaaggaga
    13441 taaaggtttg ctatcacaag gtaaagttac gaaagtgtct actgtgccaa gcggtgtaga
    13501 caaaataact accattaaat tttccgaagg cgtcgattac tcggataaaa aagatgtaaa
    13561 tattacgttc aaaaaaggaa cgtctgcaaa atcaattatc caaagaatcg ctaccaaagc
    13621 aggaattaaa atttatcaaa taaaactacc aacgaataag atttataaat ctgggtatac
    13681 tgcggacgga gatgctcttt cagtgattga agagatagtt aaggactgta aagcagcaat
    13741 atattataga cgaggtaatt tagtcattcg atctataaaa tccggtgatg atgaacgttt
    13801 tacactaaac agcagcactg gcttgatatc atcaccagaa cgtttagaga acgatgaata
    13861 ctcgggatgg agctttcagt ccttgctaca gcatcgaatt gctacagctt ctatcattac
    13921 actaaaatct aaaaccgtaa acggaacatt tcgagtcaaa aatggaatgc acaactatga
    13981 tggttctact ttcacgactc agtgtgaggt ggtatagatg gcacaagata caaagttctt
    14041 tgattcattt attagattag taaattcaag tgtatcagta cttcttatgt gcagagtcgt
    14101 taattatgat gcaagcaata aacgtgcgga tgtgcagcca ttgaatttaa agcccaacgg
    14161 agcaaaacga gcgatgattt tagatgcttt agttttaaag cacacagagg aagatatttc
    14221 tgaaggaaag atagtagcga tagtattctc tgattgcgaa ttagataata ttaatggatc
    14281 aactgacttt aaaccagaaa gctcaagaca acatagtgtt aatgatgcgg ttgtagtggg
    14341 ggtatgggac gtatgaaaga tttactaata gatagcaacg gagatatagt ggtttcagat
    14401 aacgacatat taatgactga tggcgtaaat gatattgttc aatgtgtcag gatgatatta
    14461 cagacacgtg aaggtgaatt ttattttgat gagaattcag gaatgaatca cgaaaatctt
    14521 tttacgaaga agcccaattt tgattacatc aaacaagatg taattacggc tatagaagaa
    14581 caagaagagc gtatatctag tgtagatagc gttctttttg attttgacaa agatactaga
    14641 aaattacatg taagcataaa aatgacaggc ttagatggtc ctgtgagtgt ggaagaggtg
    14701 atattaaatg cttgacgaac acggatttaa acgaaagaca tacgatgaat tgcttactga
    14761 catggaatca aaagcaaagg agctttttgg tgaggatatt aacttaagct ctcattcggc
    14821 actgggagtg tttttaagaa taatcgcttg gtttatgtcc cttatacatg aattagctga
    14881 gagagtgtac aacagtggat ttataagctc tgctgacggt gtccaactgg atagattagg
    14941 aagtaacatc agcgttttgc gtgagccggc aatgccagcg gtagtgacgt tagaacttac
    15001 tggtaatgct ggctacacaa tcgaagaagg tgttcaattc aagacaaaga acgatgtcgt
    15061 ttttgaaatg attgatgtag ttacactcga tgacaagggg catggaatag ggcaagctat
    15121 atcacaaatc tattcagaca aagcaaatgt tcctgctaat tctattacag ttgtagcaga
    15181 accaagtgaa gatattttaa cagttaataa ccctaacaag gccgatggtg gttcagaaaa
    15241 agaaaatgat acaagctaca gggcaaggat aagattagct actagtgcaa gtcctggtcc
    15301 accggtaaac ggaattatct cagctttaaa tcaagtatca ggtgttagaa gtgtatcaat
    15361 aatagaaaat aatagtattg atttggacgc gtataataac cctgctaaat cagttcatat
    15421 ttactgtctc ggaggaattg acgaagaaat tggtgaagcg atttttaata gtgtcgctgc
    15481 tggaatacaa acggttggta aagtaacggt taaagtaaaa gatttatccg gatttgagca
    15541 ttcagtttat tatgatcggg ctacttcttt atctatatac gctcatatta tcgtcgatgt
    15601 aaattctaaa tttgaagacg atggcggcga cgtaataaaa caagctgtac taaattatat
    15661 aaattcatta aacatggggg agatggttat ccattcttac atctatccag atttatatca
    15721 aattcctggg attacagttg cgaatgtaaa gttaggaaaa gatatcaata atttagc
//
LOCUS       DASDYK010000057        15724 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.057, whole genome shotgun sequence.
ACCESSION   DASDYK010000057 DASDYK010000000
VERSION     DASDYK010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15724)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15724)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15724
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.057"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(21..800)
                     /locus_tag="U0308_001769"
     CDS             complement(21..800)
                     /locus_tag="U0308_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2316732.1"
                     /translation="MDFFEISSKTVASLTRNERILFDYVVKNMNLIKNQSIREVSAEC
                     FVSTTTFLRFVRKLGFTGYSEFTTVLKFTLLGHTELKPSPFVVEQSDYREEYLKNIIE
                     SVRVLEPSKIKKITKKLVSKPRIYFFAKGLSKHAAKYIKYLYTMSGFLVEFPEDYQYR
                     QAVLPHIGKDDLVFILTYGGHDIELIQTAQKLKSRNETPMLISITGADNNIIQNMSDI
                     NLYIFTDEIEMNNLDITSRISTIAIMELILYQFMEDETSSF"
     gene            complement(817..1926)
                     /gene="aguA"
                     /locus_tag="U0308_001770"
     CDS             complement(817..1926)
                     /gene="aguA"
                     /locus_tag="U0308_001770"
                     /EC_number="3.5.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase"
                     /protein_id="HEM2316733.1"
                     /translation="MGQLKGLPVEDGFRMPGEYEPHIGCFMIWPERPDNWRLGGKPAQ
                     QNYKEVAVAISNFEPVTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVN
                     DKGEMRGVDWGFNAWGGLLDGLYFPWDKDNQIAKKVCDIERLDYYSQKDFILEGCSIH
                     VDGEGTLVTTEECLLSEGRNPNLTKIEIEQTLKKYFHVQKVIWLKHGFYLDETNGHVD
                     NIFNFVAPGEVVLSWTDNKSDPQYEISRECYDILANQTDAKGRTFIIHKLHCPDPVLI
                     TQTESEGVEAINGTFPRQAGDRLAASYVNYYTANGAIIFPLFDDPKDKDAQELLEQLY
                     PDRKIVGIKAREILLGGGNIHCITQHLPDKSTIRE"
     gene            complement(2027..2968)
                     /gene="arcC"
                     /locus_tag="U0308_001771"
     CDS             complement(2027..2968)
                     /gene="arcC"
                     /locus_tag="U0308_001771"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HEM2316734.1"
                     /translation="MNQKIVVALGGNAILSSDASAEAQQSALEKTAEYLVQFIENGDD
                     LIISHGNGPQVGNLMLQQHAGASEKNPAMPLDTCVAMTQGSIGYWMQNALDKAFLKHG
                     LDKVAVSLITQVVVDKDDPAFKKPTKPIGPFLTKEEAEKEMAETGAIFLEDAGRGYRK
                     VVPSPRPLSIKEHQIIKQLVDSGVVTISAGGGGVSVVENGLDLSGVETVIDKDFASEK
                     LAELISADLLVILTGVENVYINYNQPNQKKLERVTVSELEKYIDEKQFAAGSMLPKIE
                     AATAFVKERPNAKAIITSLENIGAMLEQGAGTVIIAG"
     gene            complement(2981..4075)
                     /gene="aguA"
                     /locus_tag="U0308_001772"
     CDS             complement(2981..4075)
                     /gene="aguA"
                     /locus_tag="U0308_001772"
                     /EC_number="3.5.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase"
                     /protein_id="HEM2316735.1"
                     /translation="MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQ
                     KAFVDVATAISRFEPVTVVASSSQYVNARYMLPDEIRVVEMDNDDAWVRDSGPTFVVN
                     DSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIH
                     VDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVD
                     NIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILI
                     TDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVVFPLFGDPNDELAREKLRQLY
                     PNCEVVGVKAREILLGGGNIHCITQQVPRG"
     gene            complement(4062..5447)
                     /locus_tag="U0308_001773"
     CDS             complement(4062..5447)
                     /locus_tag="U0308_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEM2316736.1"
                     /translation="MEKKKKFRLFDAVLMAVCVVLVVESAAPAAAIGSSQFFWWIALL
                     ILFFLPYGLVSAELGTTYDDEGGIYDWVKRAFGRKWGARVAWLYWINYPIWMASLAVL
                     FVEVITQIFPVSFGTPVSIFIQLIFVWIVVIISCYPVSDSKWILNIAAFCKVAIMLCL
                     GVLGIYFAMTKGLANDFSGKALLPTFDLESLSFISVILFNFLGFEVVTTLASDMENPK
                     KQIPQAIIYGGVLIAFFYLLAAFGMGAAIPTSELSTSGGLIDSFIMLIGGVNPFVIII
                     GIMFMYTLVANLVSWALGVNYVAMYAAKNKDLPAVFGKTNPKNGMPTGTSILNGIVAS
                     VLIVAAPLIPNENIFWAFFALNVVALLGSYILMFPAFLKLRKVDPDRERPFKVPGGKI
                     LLYLMTFVPMILLIITLIFSAVPLNGSSAELNEKIPILIGTVVAVIVGEICIWLAGKR
                     KDKGEIGNEND"
     gene            complement(5520..6545)
                     /locus_tag="U0308_001774"
     CDS             complement(5520..6545)
                     /locus_tag="U0308_001774"
                     /EC_number="2.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine carbamoyltransferase"
                     /protein_id="HEM2316737.1"
                     /translation="MNKKRDFIDTKDFSKEEILFMIEIGRKMKESIKNGHYPQLLKHK
                     TLGMIFEQSSTRTRVSFETAMTQLGGHAQYLAPGQIQLGGHESVGDTAKVLSRLVDIL
                     MARVERHQTVVELANTAAIPVINGMSDYNHPTQELGDAITMFEHLPKGKKIEDCKIVF
                     VGDATQVCASTMFMATKLGMDFVQFGPKGFQLREEHLKIAEENCKVSGGSYLITEDVD
                     IALKDADFIYTDVWYGLYEAELSEEERMKTFYPKYQVNKELISKAAPHVKFMHCLPAT
                     RGEEVTDEVLDAPYSVVIDEAENRLTAMRALLVYFMNPYVREAGFAVAEKYDAELELL
                     LRNGAGL"
     gene            complement(6780..7865)
                     /locus_tag="U0308_001775"
     CDS             complement(6780..7865)
                     /locus_tag="U0308_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEM2316738.1"
                     /translation="MKPTMMTYINEEEEMCRVILADFQTNAEKLESLVKNGAKEWLIL
                     ATGSSLNAAQSAKYYIENLADVRITIEEPFNHLYYEKLSSHLDLVIGISQSGQSTSTI
                     SALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLTLML
                     TGLHFAYKTVQIDETRFNNEISAFSRAIDAIPATIAETEAFYERWQEEFATAPKFTAI
                     GYGPTVGTCKEFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLETASAVTER
                     LVLLRDYESKYTPFTYTVKFGKGEDDRTLVIPTDLDEYQAPFLMILPFQILAHHIAEL
                     KGNKLTERIYTDFGVAMKSKTKPGDYA"
     gene            complement(7867..9225)
                     /locus_tag="U0308_001776"
     CDS             complement(7867..9225)
                     /locus_tag="U0308_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2316739.1"
                     /translation="MSSERSLSSRFIEGLSIFAQKISSQKHIMAIRDGFAAMIPITII
                     AAFFLLVNNVLLQPENGLLKFIPNVENYLGVGIQVYNATLGIMAILAAFLIGNFLAKS
                     YGMEGRTEGVIAVAAYVVLIPASSHLMSVDGKAFEAGGVLTQEMTSSTGMFLAIIAAL
                     VSVTMLAKFSKSKKLKISMPESVPPAIAKSFNILIPSFLVLSILAIIEVLVVSFVSMS
                     IPEIIVKVLQIPLVGGFQTLPGILLYVFLAGFLWVFGIHGAFVLGAISGPVLLTSLQQ
                     NIDAVNAGTALPNIVTQPFLDAFVYMGGGGTIICLVIAIFIASKRPDHRMVTKFGLIP
                     SIFNVSEPLMFGLPVVFNPIYGIPLVIAPLASTAMAYFATSWGWISQTYILIPWVTPP
                     VLSGYLATGGDIRASILQIAIIIVGTLIYLPFVLVANRAYVLEQKAAGKVEAETVTNG
                     EV"
     gene            complement(9238..11640)
                     /locus_tag="U0308_001777"
     CDS             complement(9238..11640)
                     /locus_tag="U0308_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 9 protein"
                     /protein_id="HEM2316740.1"
                     /translation="MKPSMKRQIAQTGIIHRPLPIETKHALETLAKKKQVLSSRTLFS
                     SKQQVSLEFTHQGAGDFTISDQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISAPI
                     ENEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGSVKVPDIYGREGVHGVNLINHEW
                     NDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWIP
                     QDNTLVYSHNGYSKGMPKVAFCANKFVATSFTIHDKETDKVVFTGKSYQNATETGDFI
                     ILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVFGKH
                     TTCHADIIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMASSLPEKEEMLRM
                     RLLEEGEWGLDFILKTRFGDGFRATSAGMTRWTDGLVGGMDDAIARVHNQAYENFYCA
                     GIEAYIGSQIADNATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLY
                     YATASWAASMVYQLTNKEIYAEKAAEWLYLMLEAQEKAGIRDSETSELYKGFFYRDKT
                     HKVIQHFNHQAREHLYLLALEAALETQPSNAEKQTWLQAVEMYGDYLKKVTRFTKPYP
                     LIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIQINDEIALRKFPIWFSF
                     RGNNAILLSAGKAASIAGKILKDKSLLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQ
                     YSVLNGEITGEIPVGMETFRNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITG
                     KS"
     gene            complement(11637..12602)
                     /locus_tag="U0308_001778"
     CDS             complement(11637..12602)
                     /locus_tag="U0308_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM2316741.1"
                     /translation="MDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSYPSNTENQTKA
                     TEILLKVLDDYTQNIGFIAPKQTGIGVGLVGRVNHKSGVWLEIEPGKSNPTPLADILE
                     AKTGLPVSLGNDVVCATMAEKQFGWGQETNDFIYLNVGTGLAAGFVVDGRIIQGGHFN
                     AGEIGHAVVDIHSDVLCGCGRRGCVERLASGLGIKEEALRRLNNYPTSILAEAETELT
                     GKMVLHAAEQKDELAEEIIDNATFQLANLIMNLVRTTDPECVILGGGVTQNEHFFQKI
                     LGNLQSNTIRFVTKGVVRSKLEKDKVGLIGAAVIGMRLGNEGGKE"
     gene            12804..13859
                     /locus_tag="U0308_001779"
     CDS             12804..13859
                     /locus_tag="U0308_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2316742.1"
                     /translation="MKKITIQEIAKLSGVSVSTVSRVLNNSPSVSAAKRKKIQAIIDE
                     HNYTPSVFARGMVNKQTKNIGVILPDISNPYFISLITQIQKFALDYMFSTILFNTMLA
                     EPNNKNNQHPLTEEDYLKIILEKQVDGLLILGGEIDKEIVPKEYITALNQLNNEIPVV
                     VIGSKIPELNCLFIERNLKKGVTTLVSHLTALGHKNIGFIGGESGVKITTYRLESFKE
                     AMTSYQHPVNDDWVVLSDYYTADGYAAMTQLLENSATLPTALVAINDNVAIGAIRAIN
                     DAKLSCPEDIAIVSCDQFMNGDYQTPRLTSMDQHNEYLGKMAILQLISAINGQVEPMI
                     INHNPELIIRESCGSKL"
     gene            13876..14685
                     /locus_tag="U0308_001780"
     CDS             13876..14685
                     /locus_tag="U0308_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2316743.1"
                     /translation="MEKYLICSDLDGTLLLKNQTISPKTLNLLQQLIEEGHHFAVSTG
                     RMYNSATDFANLVHPKADVIASNGGVVAVSGEIILQEKMKQSALLETFLLCQNHDLPV
                     FFFSTDTVYYTKNPPYYFTDEEDKGRVNATKLVPIKTKESFLEHADQFINGIVIEEED
                     FDKLAALRSELEKLSDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFG
                     DGENDIGMLEVAGAGVAMENASELVKKSADFVTTANDADGIYYFLKKYLNR"
     gene            complement(14722..15060)
                     /locus_tag="U0308_001781"
     CDS             complement(14722..15060)
                     /locus_tag="U0308_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HEM2316744.1"
                     /translation="MKVEGLLGFLGAALGIGFSLMVLVIPDISQALEEESFFFYMLTI
                     GSLVLSGVGLAGSFIVSHKPRLGGAMMVAAAIGCTMSISIMFLLPIVLLAVGGLIALI
                     NYEEAASVEE"
     gene            15282..>15724
                     /locus_tag="U0308_001782"
     CDS             15282..>15724
                     /locus_tag="U0308_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2712 domain-containing protein"
                     /protein_id="HEM2316745.1"
                     /translation="MIIIKNFASKNIRLIMALVIGVLVFAPVFHSKAADNNIGFDFKL
                     KPNCANSGSSSRYRETSSVNNPWKVRLDNSTEGKGTIASFWLGTYNKNKNAVQGSTIM
                     NVKQGAKTRYCGAYKVANKNTTYLAAENNNYNSKTYYVDGIWDEET"
BASE COUNT         4754 a         3437 c         2603 g         4930 t
ORIGIN      
        1 tatttatcaa ttcttaacaa ttaaaaacta ctagtttcat cttccataaa ctggtataag
       61 attagctcca taattgcaat tgtagagatg cgagaagtaa tatctaaatt attcatttca
      121 atttcatctg taaaaatata taaattaata tcactcatat tttgaataat attattatca
      181 gccccagtaa tcgaaatcaa catgggcgtt tcatttctgc tttttagttt ttgggcagtt
      241 tggattaatt caatgtcatg tccaccgtac gtaaggataa aaactaaatc atctttacca
      301 atatgcggca atacagcttg gcgatactga taatcttcag gaaactctac caaaaatccg
      361 ctcattgtat agagatattt gatgtatttc gcagcatgtt tactcagccc tttagcaaaa
      421 aaataaattc gcggtttgct tactagtttt ttggtgattt tcttgatttt acttggttct
      481 aaaactcgga cagattcaat aatgtttttc aaatattctt cacgataatc cgactgttct
      541 acgacaaatg gggacggttt tagctctgta tgcccaagta aagtgaactt taagactgtt
      601 gtaaactcgc tataaccagt aaatccaagc tttcttacaa aacgcaaaaa agttgttgtt
      661 gaaacaaagc attctgcaga aacttctcga atactttgat ttttaattaa attcatattc
      721 ttaacgacat agtcaaataa aatccgctca ttccgagtta gggaagctac agtcttactg
      781 gaaatttcga aaaagtccat acttcaagtc tcctttttat tcacgtatcg tacttttatc
      841 agggagatgt tgcgtgatac agtgaatatt tccgccgcct agcaaaatct cacgtgcttt
      901 aatccccaca atttttctat caggatataa ctgttcaagt aattcctgcg catctttatc
      961 ttttggatca tcaaacaatg ggaaaataat agcaccattc gctgtatagt aatttacata
     1021 actagcagct aatcgatctc cagcctgtct agggaaagtt ccattaatcg cctccacacc
     1081 ttcgctctct gtttgcgtaa taagtactgg atccggacaa tgtagtttat gtattataaa
     1141 agttcttccc ttagcatctg tttggttagc taaaatatca tagcattctc ttgaaatttc
     1201 atactgcgga tcacttttgt tatccgtcca cgataaaaca acttcgccag gtgccacaaa
     1261 gttaaaaatg ttatctacat gtccgtttgt ttcgtcaaga tagaagccat gcttaagcca
     1321 aattaccttt tgtacatgga aatatttttt taaagtttgt tcgatttcta ttttggttaa
     1381 attcggattc cttccttctg ataacagaca ctcttctgtc gtaaccagcg tcccttcacc
     1441 gtctacatga atggaacaac cttctaaaat aaaatctttc tgtgagtagt aatcaagtcg
     1501 ctctatatca caaacttttt ttgcaatttg attatcttta tcccacggaa aatatagacc
     1561 atcaagaaga ccaccccaag cattaaatcc ccagtcaaca ccacgcattt ctcccttatc
     1621 attcaccaaa aaacttggtc cataatcgcg tatccacgca tcatcattac tcatttcgat
     1681 aacacgaatg gtatccggaa gttctttacg agcattttta tattgatttg gtgatacaaa
     1741 catagtgact ggctcaaaat ttgaaatagc gactgcaact tctttatagt tttgttgcgc
     1801 tggctttcca ccaagccgcc agttatcagg tctttctggc caaatcatga aacagccaat
     1861 atgaggttcg tattctcctg gcattctgaa tccgtcctct accggcaacc ctttcagttg
     1921 tcccatcctc attctcctcc tattacttca taaccacatt atacatgaaa tactgtttta
     1981 caagacaaaa accgagtaac aagtacccgg atttcgccct attctactag cccgcaataa
     2041 tcactgtccc tgccccctgt tctagcatgg cgccaatatt ttcaagcgag gtgattattg
     2101 ctttggcatt tggtctttct ttgacaaaag ctgttgctgc ttcgattttg ggcaacatac
     2161 ttcctgctgc aaattgtttc tcatcaatat atttttctaa ttctgaaacg gtaactcttt
     2221 caagtttctt ttgatttggc tgattataat tgatataaac attttccacc cctgttaaaa
     2281 taaccaacaa atccgcacta attagttctg caagtttttc agaagcaaaa tctttatcga
     2341 ttacggtctc taccccagat aaatcaaggc cattttcaac gaccgaaact ccgcctccac
     2401 cagcagaaat agtcacaaca ccactatcaa ccaattgttt aataatttga tgttctttaa
     2461 tactaagcgg gcgaggagat ggtacaactt tacggtaacc tcgaccagcg tcctcaagaa
     2521 atattgcacc agtttctgcc atttcctttt cagcctcttc tttagtaaga aaaggcccaa
     2581 ttggtttggt tggtttttta aaagcaggat catctttatc cacaacaact tgtgtaatta
     2641 atgaaaccgc tactttatct agcccgtgtt ttaaaaatgc tttatctagc gcattttgca
     2701 tccagtagcc aatactccct tgcgtcattg cgacacacgt atcaagcggc attgctggat
     2761 tcttttcaga agctcccgca tgttgttgca gcatcaggtt gcctacttgc ggtccatttc
     2821 catgcgaaat aattaaatca tccccgtttt cgataaattg caccaaatat tcggctgttt
     2881 tttcaagtgc actttgttgc gcttcagcac tggcatcact cgataaaatt gcatttccac
     2941 ctagtgccac gactattttt tgattcatgc tgttcactcc ttatcctctt ggcacctgtt
     3001 gagtaataca gtgaatattt ccgccaccaa gtaaaatttc tcttgctttc acaccaacca
     3061 cttcacagtt tggataaagt tgacgtaatt tttcgcgggc aagttcatca tttggatccc
     3121 caaatagcgg gaaaaccact ccaccattcg ctgtgtagta attaatatag cttgctgcca
     3181 gtcggtcgcc ttcttcccgt ggtagcgttc cttccacagc atctacacct ttactttctt
     3241 catcggtaat taaaattggt tttggtacat ttattttatg cacttctaat ttgcgccctt
     3301 ttgcatcggt ttcattcgat aaaatatcaa agcattcttt agaaatttca tactgcggat
     3361 cagtttcatc atctgtccac gcgagcgcta ctacacctgg gcgtacataa ttgaaaatat
     3421 tatctacatg accattcgtt tcatctaaat aaattcctcg ttttaaccaa ataatttttt
     3481 ctaaatttaa atactctttt aaaaccattt cgatttgctg ttttgaaagt tgtggattgc
     3541 gaccttctga taataagcat tcttctgtcg ttacaagcgt gccttcaccg tcgacatgaa
     3601 tggaacctcc ttctaacaca aaatcagcta agcgataacg atcttttcgc tctaattcgc
     3661 atattttttg agcgacttga tcatctttat cccacgggaa gtacaaacca tcgaccaatc
     3721 caccccaaga gttaaatgac caatccacac cacgtacgtc accagaatca ttgaccacaa
     3781 aagttggtcc agaatcgcgc acccaagcat cgtcgttatc catttccact acgcgaattt
     3841 catcaggcaa catatatctc gcatttacat attgacttga acttgcaaca actgtaactg
     3901 gttcaaaacg ggaaatcgct gtcgccacat caacaaaagc tttttgcgca ggtttggctc
     3961 ctaagcgcca attatctggt cgttctggcc aaataatata gcaaccagcg tgtttttcaa
     4021 attccccagg cattctaaat ccatcttttt tagaagaact atcaatcgtt ctcatttcct
     4081 atctctcctt tgtcttttct tttcccagca agccaaatac atatttcacc aacaatcacc
     4141 gctacaacgg ttccaattaa gattgggatt ttttcattta attctgcact tgaaccattt
     4201 aatggtactg cagagaaaat caaagtaata atgagtaaaa tcattggtac gaaagtcatt
     4261 aagtaaagca agattttgcc acctggcact ttaaatggac gttctcggtc cggatccacc
     4321 ttacgtaatt tcaaaaatgc tggaaacatt aggatatatg aacctagtaa agcaactaca
     4381 tttaatgcaa agaatgccca gaaaatattt tcatttggaa taagtggtgc cgcaacgatt
     4441 aatacagaag ctacaatccc atttaaaata ctagtacccg ttggcatacc atttttcgga
     4501 tttgtttttc caaaaacagc tggtaaatct ttgtttttcg ctgcatacat tgctacataa
     4561 ttcacgccta gtgcccaaga gactaaattt gctactaatg tatacataaa cataatccca
     4621 ataataataa caaatgggtt aactccgcca atcagcataa taaagctatc aataagacca
     4681 ccggatgttg aaagttcaga agtcggaatt gctgccccca ttccgaaagc tgctagtaaa
     4741 tagaagaatg caatcaaaac cccaccataa atgattgctt gaggaatttg ttttttagga
     4801 ttttccatgt cactcgcaag cgttgttacc acttcaaaac ctaagaaatt aaataaaatg
     4861 actgaaataa atgacaaact ctctaaatca aaagttggaa gtaatgcttt tccagagaaa
     4921 tcattcgcca atcccttcgt catcgcaaaa taaattccaa gtacaccaag gcaaagcata
     4981 attgccactt tacagaaagc tgcgatatta agaatccatt tgctatcact cactggataa
     5041 caactaataa taacaacaat ccacacaaaa atgagctgaa taaaaatcga aaccggcgtc
     5101 ccaaatgaaa ccgggaaaat ttgcgtaata acttctacaa acaataccgc taaactcgcc
     5161 atccaaatcg gataattaat ccagtataac caagcgacac gcgcacccca ttttcggcca
     5221 aatgcccgtt ttacccaatc atagattccg ccttcatcat cataggttgt cccaagttct
     5281 gccgaaacaa gtccatatgg taagaaaaat aaaataagta acgcaatcca ccagaaaaat
     5341 tgagatgatc ctatcgccgc tgctggcgcg gcagattcca caactaaaac gacacataca
     5401 gccataagaa ccgcatcaaa taatctgaat ttcttctttt tttccaaaat gcccactcct
     5461 ctttttaagt ggggggaaga aaacggccag cgctctcttc tcctccttat tttggtatct
     5521 tataagccag cgccatttct aagtaataac tctagttctg catcatattt ttccgcaact
     5581 gcaaaacccg cttctctcac atacggattc ataaagtata caagcagtgc tctcatcgct
     5641 gttaaacgat tttcagcttc gtcaataaca actgagtatg gagcatcaag cacttcgtcc
     5701 gtaacctctt ccccacgagt tgcgggtaaa cagtgcataa acttcacatg tggagccgct
     5761 ttactgatca attctttatt cacttgatat ttaggataaa aagttttcat tcgctcttct
     5821 tcggaaagtt ccgcttcgta taggccatac caaacatctg tataaatgaa atctgcgtct
     5881 tttaacgcaa tgtccacatc ttctgtaatt aaatagctcc cgccagatac tttgcaattt
     5941 tcttcagcga ttttcaaatg ttcttcacgt aattgaaatc cttttggtcc aaattgaacg
     6001 aaatccattc caagttttgt tgccataaac attgtagatg cacatacttg agtagcatct
     6061 cctacaaaga caattttgca gtcttcaatc ttttttcctt ttggaaggtg ttcgaacata
     6121 gtaattgcat cacctaattc ttgtgtagga tggttgtaat cactcatccc attaataacc
     6181 ggaatagcag ctgtgtttgc aagttctact accgtttgat gacgttcaac acgcgccatc
     6241 aaaatatcta caagcctaga aagaactttg gctgtatcgc ctactgattc atgtccgccg
     6301 agctgaattt gtccaggagc taaatattgc gcatgaccac caagctgtgt cattgctgtt
     6361 tcaaaagata cacgagttct tgttgatgat tgttcaaaaa tcatcccaag cgtcttatgt
     6421 tttaaaagtt gtgggtaatg accgttttta atagattctt tcattttgcg accgatttct
     6481 atcataaata gtatttcttc tttagaaaaa tctttagtgt cgataaaatc tctttttttg
     6541 ttcatttcta tcacctcaac catttatttt ctaaaccttt tctggggcat actcgagtat
     6601 ttccttgcca catgctcatc atagtacaaa agagattgtt tttgaatacg ttttcttttt
     6661 ttaagaacag acggaatcac cctgtaactc gttacattct gcgtaacatg tgacccaaat
     6721 acaaaaagaa gactggaaaa accctcctta taaggatttt tccagtctat tagcctctct
     6781 tatgcatagt cacctggttt tgttttactc ttcatcgcta cgccaaagtc tgtgtagata
     6841 cgttctgtta atttattgcc tttcaactcc gcaatatgat gcgctaaaat ttggaaagga
     6901 agaatcatta ggaaaggcgc ttggtattca tctaaatctg ttggtataac tagcgttcgg
     6961 tcatcttcac ctttaccaaa tttaactgta tacgtaaacg gggtgtattt agattcataa
     7021 tcccgtaaca atactaatcg ctcggtaact gcactcgccg tctccaagaa gaagattcta
     7081 tgttgtggat ttacttctaa atacggccca tgcataaacg cttctaaatc aagaccttgt
     7141 gatggcacgc ggacagtttc tgagaatttt gtttcaaatt ctttgcatgt tccaacagta
     7201 ggaccatatc caattgctgt gaatttcggt gcagtagcga attcctcttg ccatctttca
     7261 taaaatgctt ctgtttcggc aattgttgct ggaattgcat cgattgctcg gctaaatgca
     7321 ctgatttcat tattgaacct agtttcatca atttgtactg ttttgtatgc aaaatgaagt
     7381 cctgtcagca ttaatgttag aactgttgct gtaaaacctt ttgttacgta gccaactcgt
     7441 tcttttccgg agccaatatc aagcgtaata tccgcaaatt cagcaatttc actcgttaca
     7501 tcactagtta gagcgactac tggaacggaa gcttcttttt tcactcgttc tagcgcagaa
     7561 atggtcgacg tgctttgacc gctttgcgaa atcccgataa ccaaatctag atggcttgat
     7621 aatttttcat aatataaatg gttgaagggt tcttcaatcg taatgcggac atcggctaga
     7681 ttttcaatgt aatatttggc gctttgagct gcatttaagc ttgatccagt tgctaaaatt
     7741 aaccattctt ttgcgccatt ttttacgagt gattctagtt tttctgcatt tgtttggaaa
     7801 tctgctaaaa ttactcgaca catttcctct tcttcattaa tatacgtcat cattgttggt
     7861 ttcattttaa acttctccat tcgttactgt ttctgcttct actttcccag cagctttttg
     7921 ttctaaaaca tacgcgcggt ttgctacgag tacaaatggt aggtaaatca gcgttccaac
     7981 gataataatt gcgatttgaa ggatggacgc gcgaatgtct ccgcctgtcg caaggtaacc
     8041 cgaaagcact ggtggcgtca cccacggaat caaaatataa gtttggctaa tccagcccca
     8101 tgaagttgcg aagtatgcca ttgcagtcga agctagaggt gcaataacta atggaatacc
     8161 ataaatcggg ttgaatacaa ctggcagtcc gaacattagt ggttcgctga cgttgaaaat
     8221 actcggaatt aagccgaatt ttgtgaccat gcgatgatcc ggtcgtttag aagcaatgaa
     8281 aatcgcgata actaaacaga tgatggttcc gccgccaccc atgtatacaa aagcatctaa
     8341 aaacggttgt gtaacgatgt tcggtaaagc tgtccctgca ttcactgcat caatattttg
     8401 ttgtaaagaa gttaaaagaa ctggtccaga aatcgcgcct aatacgaatg cgccgtgaat
     8461 accaaagacc cataagaatc ccgctaaaaa tacataaagt agaatacctg gtaacgtttg
     8521 gaacccgcca actaatggaa tttgtagtac ttttacgata atttctggaa tactcattga
     8581 tacaaaacta actacaagca cttcaataat tgctaaaata cttagaacta agaatgatgg
     8641 aattaaaatg ttaaatgatt ttgcaattgc cggtggaaca ctttcaggca tagagatttt
     8701 taatttttta cttttcgaga atttcgcaag catggtaaca ctgactaaag cagcgatgat
     8761 tgcaaggaac attcctgtcg aacttgtcat ttcttgggtt aaaacgccgc cagcctcaaa
     8821 agctttaccg tcaaccgaca ttaaatgtga agatgccggt attaaaacaa cataagcagc
     8881 tacagcgata accccttccg tacgcccttc cattccgtat gatttagcta aaaagttacc
     8941 aattaagaat gctgctaaaa tcgccataat accgagtgtc gcgttataga cttgaatacc
     9001 tacacccaaa taattttcta catttggaat gaatttaagc agaccatttt ctggttgaag
     9061 taacacgtta tttacaagca agaaaaatgc ggcaataatc gtaatcggaa tcatcgctgc
     9121 aaagccatca cgaattgcca tgatatgctt ttgcgatgaa attttttggg caaaaattga
     9181 taatccttca ataaatcggc tagataaact tctctctgaa ctcatttttt tgtcctccta
     9241 tgactttcct gttattttgt ttaaatctgc tacaattgac atccatttgc cggcattacc
     9301 gacccaaact tccttataag ttgcattatt aaactccggc cagtatggtt catcttcatt
     9361 tctaaaagtt tccattccga ctggtatttc tcctgtgatt tcgccattta gtacactgta
     9421 ttgctgtgcg tagcgataac cttcgccatg catcattgat tgtccaaacg ggttcattcc
     9481 aattacccac tgtaactgac cttccgcaat atctaaaagc gacttatctt tcaaaatttt
     9541 tccagcaatc gatgcggctt ttcctgccga aagtaaaata gcgttatttc ctctaaacga
     9601 gaaccaaatt gggaattttc gcaacgctat ctcgtcgttt atttggatac cttgctcgaa
     9661 ttgtaattgg tattcttcta tcgcccgttc atctatgagt aaatgttgta agtggaaact
     9721 tgcttcgtct aaatactcat cttttttata aagtcctgct ggaataagcg gatatggttt
     9781 agtgaaacgt gttacttttt tcaaatagtc gccgtacatt tcgaccgctt gtagccaagt
     9841 ttgtttttca gcgttactcg gttgcgtttc aagcgccgcc tcaagtgcca gtaaataaag
     9901 atgttcgcgt gcttgatgat taaaatgctg aatgaccttg tgcgttttat cgcggtagaa
     9961 aaatcctttg taaagttcgc tagtttcgct gtctctaatt ccagcttttt cttgcgcttc
    10021 tagcatcaaa tataaccatt cggccgcttt ttctgcatat atttctttgt ttgttagttg
    10081 ataaaccatc gaagctgccc aagaagcagt cgcataatat agactttctg aggtttgata
    10141 cgtatgctcc cagaaaatcg gcttttggct cgttccgtgt ttttccagtt cctttatcgc
    10201 aaaaagcaaa tcctcttccg cgattctcag caaatgattc tgcatagtag cattatccgc
    10261 aatttggctg ccaatatacg cttcaatccc agcacaataa aagttctcat aagcttggtt
    10321 atgaacgcgc gcaattgcat catccatccc accaacaagc ccatccgtcc atctcgtcat
    10381 acctgcgcta gtcgctctaa aaccgtctcc gaagcgcgtt ttcaaaataa aatctagtcc
    10441 ccactcgcct tcttctaaaa ggcgcatccg caacatttcc tctttttcag gtaaactcga
    10501 agccatttca tataaagcca tcgttacttc cgccgtttga ataagctgct gcgaaacatc
    10561 gcccgcatcg tgccatccac cattaaatga caactgtttc ccatcgtgtt cagcgataat
    10621 atctgcgtga caagtcgtat gtttcccaaa aaccgggcaa ccgcatcgtt cgcagaaaat
    10681 aaagttaagc gatttccaga tagaagattc ccagatcact tcggaagtcc caatttgaaa
    10741 aatttccgtt tgcatatccg caaattttaa atagtattca cccacagttt gtaaatcaga
    10801 aaaatcaaga ataatgaaat cgccagtttc tgttgcgttt tggtaacttt ttccagtaaa
    10861 aacaactttg tctgtttctt tgtcgtgaat tgtaaaggaa gtcgctacaa acttgttggc
    10921 gcaaaacgct actttgggca tgcccttaga gtaaccgtta tgcgaataaa ctagcgtatt
    10981 atcttgcgga atccaaccct tggagatttc cggctcactg atttgttcta atttaatttc
    11041 attaatgaat aattccattg ttccagcagt caatcgctct gggccattca agtaataact
    11101 aaaactcatt tcggtcattc ggtcacgcgg caaaccttca atttcaaaaa tgacatcatt
    11161 ccattcatgg ttgattaaat tcacaccgtg aacaccttct cgcccatata tatcaggcac
    11221 tttcacgctc ccgtcgtttt taaaactaat cattaaatag ggatttgtta ctccaggaaa
    11281 atcagggaaa acttggattc gcacacgatt aaagccgctc cagtcctcat tttcaatcgg
    11341 ggccgatatg gtaacgttac caaaattagt ataatcaccg tcatccggag caccagcggg
    11401 ccaatgcggc ataaccacag gcgaagaaag cttgatttca tcttggtcag aaatagtaaa
    11461 atctcctgct ccttgatgtg taaactctaa agaaacctgt tgtttagagc taaataaagt
    11521 cctacttgat aaaacttgtt tctttttcgc taaagtttct aacgcatgct tggtttcaat
    11581 agggagtggt cgatgaataa taccagtttg cgcaatttgt cgtttcatac ttggcttcat
    11641 tcttttcctc cttcatttcc tagtctcatt ccaataacgg ctgcaccaat taagccaacc
    11701 ttatccttct caagcttaga gcgaacaaca ccttttgtaa caaaacgaat tgtattgctt
    11761 tgaagattac ctagtatctt ttggaaaaaa tgctcatttt gtgtcacgcc tccgccaaga
    11821 attacgcatt cagggtcggt tgtacggact aaattcataa tcaaattagc tagctgaaac
    11881 gttgcattat caataatttc ctctgcaagc tcatcttttt gctccgctgc atgaagaacc
    11941 atttttccag ttagttctgt ttcggcttca gcaagtatgg atgtcgggta gttatttaaa
    12001 cgtctcagtg cctcttcttt aatcccaaga ccggaagcaa gtcgttccac acaaccacgt
    12061 ctaccgcaac cacagagtac atcactatga atatctacta cagcatgacc gatttcaccc
    12121 gcgttaaagt gcccgccttg tataattcgt ccatccacca caaacccagc agcaagacca
    12181 gtaccaacat ttaaataaat aaaatcgttt gtttcttgtc cccaaccaaa ttgcttttcg
    12241 gccattgtgg cacaaacaac atcattgccc agacttacag gtaatcctgt ttttgcttct
    12301 aaaatgtctg cgagcggggt tggattgctt tttccaggtt caatctctaa ccaaacacct
    12361 gacttgtgat tcacacgacc aactaatcct acaccaatac ccgtttgttt tggtgctata
    12421 aaaccaatat tttgcgtgta atcatctaaa acctttaaca atatttcggt agctttggtc
    12481 tgattctccg tattacttgg gtaactcttg gaatttagca cctcaccatc ttttgttact
    12541 tcgccaatta aaattttagt gccacctaga tcaattccga tgacagattc ttgtatgtcc
    12601 aactattcca cctcattttt ggtaacgtta ccaaattaaa acgtttgttg atagcgcttt
    12661 ctaccataga ataaccggat atttttaata tgtcaaccct ttttattata tttttgataa
    12721 cgttaccaaa tttcacttgt tatttccccc taagtacgct acacttaaaa tagttaaaaa
    12781 tgcttacgag gtgaacattt cgaatgaaaa aaataaccat acaagaaata gctaaactta
    12841 gcggtgtctc cgtttcaact gtttcgcggg ttcttaataa cagtccttct gtgtcagctg
    12901 cgaaacgcaa aaaaatccaa gcaatcattg atgaacataa ttacacacct agcgtgtttg
    12961 ctcgtgggat ggtcaataag cagacgaaga atataggcgt tattttacca gatatttcca
    13021 atccctattt catttcactt ataacgcaaa ttcaaaaatt cgcgctagat tatatgtttt
    13081 cgacgatttt gttcaataca atgcttgcgg agccaaataa taagaataat caacatcccc
    13141 taacggaaga agattaccta aaaatcattt tagaaaagca agtggatggt ttacttattt
    13201 taggtggaga aatcgataaa gaaatcgttc caaaagagta tataactgct ctaaatcagt
    13261 taaataatga aattccagtt gttgttatcg ggtcgaaaat tcctgagctc aactgtttat
    13321 ttattgaacg taatttaaaa aaaggggtaa caaccttagt tagtcatcta actgcacttg
    13381 gacacaaaaa tattggtttt attggcggag aatctggtgt aaaaatcacc acctaccgtc
    13441 tagaatcttt taaagaagca atgactagct atcaacatcc ggtaaatgac gactgggtgg
    13501 ttctgtctga ttattatacg gctgatggct acgcagcaat gactcaactt ttagaaaata
    13561 gcgctacttt gccgacagca cttgtagcta tcaatgacaa tgtggctatc ggggcaattc
    13621 gagcgattaa tgatgccaaa ctttcttgcc ctgaagacat cgctattgtc agctgcgatc
    13681 aatttatgaa tggcgattac caaactccgc gtttaacttc catggatcaa cacaatgaat
    13741 atcttggtaa aatggctatt ttacaactaa ttagcgcaat taacggtcaa gtcgagccaa
    13801 tgattatcaa ccataatcca gaactaatta tccgcgaatc ttgcggctct aagctataac
    13861 gaaaggaagg tccacttgga aaaatactta atttgttctg atttagacgg gacattacta
    13921 cttaaaaacc aaactatctc accaaaaaca ctaaatttat tgcaacaact aatagaagaa
    13981 ggtcatcatt ttgccgtttc taccggtcga atgtataatt ccgcaacaga cttcgccaac
    14041 ctcgttcatc caaaagcaga tgtcattgct tcaaacggcg gtgtagttgc agtatcaggc
    14101 gaaattatcc tacaagaaaa aatgaaacaa tctgcgttac tcgagacatt tttattgtgc
    14161 caaaatcatg atttacctgt gtttttcttt tcaacagata ctgtttacta cactaaaaat
    14221 cccccatatt attttacgga tgaagaagat aaaggccgcg taaatgctac aaaactcgtt
    14281 cctatcaaaa caaaagaaag cttccttgag catgcggacc agttcattaa tgggattgta
    14341 atcgaggaag aagatttcga caaactcgca gcccttcgaa gtgagctaga aaaactatcc
    14401 gatgtttcta tcctttcttc ccatgccaat aatatcgaga tcttaccaaa agatatggat
    14461 aaaaaatacg ccgtgaaaaa tctcgctgca catttaaata tcaagccaga aaatgtaatt
    14521 acttttggtg atggtgaaaa tgatattggg atgcttgaag ttgctggcgc aggggttgcg
    14581 atggaaaatg caagtgaact agtgaaaaaa agtgctgatt ttgttactac tgcaaatgat
    14641 gccgatggaa tttactactt tttgaaaaaa tatcttaatc gttaataaaa aaagctgccc
    14701 acgcggacag ctttttttca tttattcttc tacggaagca gcttcttcat agttaattaa
    14761 tgcaattaat ccgccaacag caagtagtac gattggcagt aagaacataa tcgaaattga
    14821 cattgtacag ccaattgcag ctgccaccat cattgcccca ccaagacgcg gcttatgcga
    14881 aacaataaac gatcccgcaa gtcccactcc agaaagcaca agtgaaccaa tcgttaacat
    14941 atagaagaaa aatgactcct cttctaatgc ctgtgaaata tcaggaataa ctagaaccat
    15001 caaactaaat ccaataccca gtgccgcccc taaaaagcca agtaatcctt caactttcat
    15061 gataaaaact ccttttttat acgcattttc ttttatgtta tcattttaac aaaaaattga
    15121 atagttatca gcttggacaa atgatttttc gtaaattact tctaaataag cagacgatta
    15181 tgcaaacaat ttaccgtttt ctgtaaattc aaaaaacaaa ttgaccagct ctttatattg
    15241 tgatacgctt aacaagtggc gttattctaa tagaatagga gatgattatc ataaaaaatt
    15301 tcgcatcaaa aaacattaga ctaattatgg cactggttat tggagtattg gtttttgcac
    15361 ctgtttttca ttcaaaagcc gctgataata acattggttt cgattttaaa ctcaaaccaa
    15421 attgcgctaa ctcagggtca agctcaaggt atagagagac ttcttctgta aataaccctt
    15481 ggaaagttcg cctcgataac tcaacagaag gaaagggtac aattgcttct ttttggctag
    15541 gtacatataa taaaaacaag aatgctgtac aaggctcaac aataatgaat gttaaacaag
    15601 gtgcaaaaac acgttattgc ggcgcttata aagtagctaa taaaaataca acctatttag
    15661 ctgctgaaaa taataattat aattccaaaa catactatgt cgatggtatt tgggatgagg
    15721 aaac
//
LOCUS       DASDYK010000058        15544 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.058, whole genome shotgun sequence.
ACCESSION   DASDYK010000058 DASDYK010000000
VERSION     DASDYK010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15544
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.058"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            56..1084
                     /locus_tag="U0308_001783"
     CDS             56..1084
                     /locus_tag="U0308_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde reductase"
                     /protein_id="HEM2316746.1"
                     /translation="MKNNVLVTGGTGFLGMHIIFQLLQQGYQVKTTVRSLKSKEKVIE
                     VLQNNGITDFTQLSFVELDLSKDEGWKEAMLDCKYVLSVASPVFFGKFKNEEELIRPA
                     IEGITRILQAAKEAKVKRVVMTSNFGAIGFSNADKNSITTEAYWTDELAKGLSAYEKS
                     KLIAEKEAWKFMENETELEFATINPVAIFGPSQSSHVSGSFDLLKNLLNGSMKRIINI
                     PLNVVDARDVADLHIRAMITPEANGERFIASADGEISMADIAHLLQRERPELVSKMPK
                     KTLPNAAIRAAAIFSKHAKEGELMINMNRQISNSKARDLLGWQPISTKEEAVLAAVDS
                     LAKYGLLD"
     gene            1173..2330
                     /locus_tag="U0308_001784"
     CDS             1173..2330
                     /locus_tag="U0308_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEM2316747.1"
                     /translation="MINTNQSSKESSAVYIHIPFCEHICYYCDFNKVFLEGQPVDEYV
                     DLLIKEMELTAAKGPIAPVDTVFVGGGTPTTLNEAQIARLCTAIHNILPLKKDIEFSF
                     EANPGDLSLSKLQAMQDHGVNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIG
                     FENVSIDLIFSLPGQTEADFQDTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLF
                     LPGQDAEANMYDLLLNEMEKHGRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAH
                     GYVGNTRYSNFGPIKKYMEPLQKNILPTFQQKELTLKEKMEEEMFLGLRKVDGVDKKH
                     FKQKFGQDLDATFANAIQKTTAKGWLENNEENVALTRSGRFLGNNVFQEFL"
     gene            2477..3514
                     /gene="hrcA"
                     /locus_tag="U0308_001785"
     CDS             2477..3514
                     /gene="hrcA"
                     /locus_tag="U0308_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEM2316748.1"
                     /translation="MLTERQLLIFRAIIDHFTWTIQPVGSKNLLKEKGLPYSSATIRN
                     EMGVLEEYGFIEKTHSSSGRVPSEKGYRFYVDYLLQPKKLDKSDRQMIRSFFSENYYE
                     MEGLIQNSALMLSDLTNYTSILLGPEATKNHLSGFRFVPINNFQAMLILITDQGHVDN
                     HLVTIPEGTTLSDIERMVNILNERLVGLSLDDLKVQIPMEVKELLGKHVRNYESFMHV
                     FSDSFAQASQQKVYFGGKTNILNQPEFHDINKVREMLHLMEEEQDVYELFRDIPDGLQ
                     VKIGRENNNSLMEDCSIITATYNIAGERVGGIVLLGPTRMEYSRMMGLVDVMSRDLTD
                     VLTKLYRDNQN"
     gene            3556..4131
                     /gene="grpE"
                     /locus_tag="U0308_001786"
     CDS             3556..4131
                     /gene="grpE"
                     /locus_tag="U0308_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEM2316749.1"
                     /translation="MSEKKNKKERLADEIEQEELNILDETEETVEEEAAADTLTEEQA
                     KILELENKLDEVENRYLRMQADFENVKKRHIADRDASQKYRSQSLAQDLLPALDSFEK
                     ALATTSDQEEVKQILKGMEMVYNQILVAFEKEGIEVIPAVGEQFDPNFHQAVMQDSDE
                     NAGSNEITAELQKGYKLKDRVIRPSMVKVNQ"
     gene            4165..6006
                     /gene="dnaK"
                     /locus_tag="U0308_001787"
     CDS             4165..6006
                     /gene="dnaK"
                     /locus_tag="U0308_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEM2316750.1"
                     /translation="MSKIIGIDLGTTNSAVAVLEGGEAKIIPNPEGARTTPSVVGFKN
                     GERQVGEVAKRAAITNPNTISSIKRHMGTNYKETIEGKDYSPQEISAIILQYLKSYAE
                     DYLGETVDKAVITVPAYFNDAQRQATKDAGKIAGLEVERIINEPTAAALAYGMDKTET
                     DQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDN
                     GIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEVTLTRAKFD
                     ELTHDLVERTIAPTRQALKDANLSASDIDQVILVGGSTRIPAVQETIKKELGKEPHKG
                     VNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVMTTLIERNTTIPTSK
                     SQTFSTAADNQPAVDIHVLQGERPMAKDNKTLGRFQLADIPPAPRGIPQIEVSFDIDK
                     NGIVTVRAKDLGTGKEQNIVIKSSSGLTDEEIEKMVQDAEANAEEDKKNKENAELRNN
                     ADQLVFTVDKTLKELEGKVEEEEVKKAEAARDELQEALKGEDFEAIKEKTESLNEIVQ
                     NLSVKLYEQAAAEQQAAGGAEGQEAPQNDDVVDAEFEEVNDDDKENK"
     gene            6148..7278
                     /gene="dnaJ"
                     /locus_tag="U0308_001788"
     CDS             6148..7278
                     /gene="dnaJ"
                     /locus_tag="U0308_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEM2316751.1"
                     /translation="MAKRDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADE
                     KFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFDTFFG
                     GGGRQQDPNAPRQGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTCHGSGAKPGTTP
                     EKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTGKEIKEKCPTCHGKGRVTKTKKI
                     KVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVFVVIPDEFFEREADDIYVEVPIT
                     FVQATLGDEIDVPTVHGKVRLKIPSGTQTGTTFRLRGKGVPHLRGNGTGDQHVIVKVI
                     VPKKLDDKQKEILREFASTTGDKVDEQTSGFFDKMKRAFKGD"
     gene            7350..8294
                     /gene="prmA"
                     /locus_tag="U0308_001789"
     CDS             7350..8294
                     /gene="prmA"
                     /locus_tag="U0308_001789"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEM2316752.1"
                     /translation="MEWSEVEVHTTNEAVEPVANVLTEFGAAGVSIEDVADFLRERED
                     KFGEIYALRREDYPEDGVIIKAYFLKTTEFVEQIPEIEQTLKNLSTFDIPLGNFQFVV
                     NDVDDEEWATAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPT
                     TQLCIRALSDYLQPGDEVIDVGTGSGVLSIASAKLGAKSILATDLDEIATRAAEENIT
                     LNKTEHIITVKQNNLLQDINKTDVDIVVANILAEVILLFPEDVYRALKPGGIFIASGI
                     IEDKAKVVEEALKKAGLVIEKMEQQGDWVAIISKRGVE"
     gene            8295..9062
                     /locus_tag="U0308_001790"
     CDS             8295..9062
                     /locus_tag="U0308_001790"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003732345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEM2316753.1"
                     /translation="MQRYFVTNELENDNETLSITGENFHHITRVMRMKESDQVFIVFP
                     SKKTCIAAITAINDDEVFLNLVKWLEEDTELPIEITIASGLPKGDKLELIIQKSTELG
                     AHKFIPYKAERSVVKWDDKKVIKKIERLQKIAQEAAEQSHRTIIPEVHYAASFKELMF
                     DHVHYDFVIAAYEESAREGEDSALANLFQTMKPGQSVLCVFGPEGGISEKELMQLQEV
                     NAKLAGLGPRILRTETAPLYCLSAASFYFDLYKNKKE"
     gene            9260..9433
                     /locus_tag="U0308_001791"
     CDS             9260..9433
                     /locus_tag="U0308_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016998564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEM2316754.1"
                     /translation="MSKTVVRKNESLEDALRRFKRTVSKSGTLQESRKREFYEKPSVK
                     RKKKSEAARKRKF"
     gene            9453..9899
                     /locus_tag="U0308_001792"
     CDS             9453..9899
                     /locus_tag="U0308_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEM2316755.1"
                     /translation="MTLLDKLNEDMKQAMRDKEKEKLSVIRMLKAALQNEAIHQGVKD
                     LTPDDEVTVISRELKQRRDSLAEFDKAGRNDLSDKVRSEIVIVEDYAPKQLTPEELEN
                     IVKATIEEVGASSKADFGKVMSAIMPKVKGKADGGAVNQFVKKYLS"
     gene            10087..11046
                     /locus_tag="U0308_001793"
     CDS             10087..11046
                     /locus_tag="U0308_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEM2316756.1"
                     /translation="MLNEFNEVVELSDDTNIQDLFGNNNKNIELLEELLQVKIITRGE
                     SLSITGEEEPVQHTTAVLNELILTVKRGIHIDGRDIAQAVKMQRNGTLIYFHTLFEEE
                     ITKNAKGMPIRPKTFGQRTYIQMIKKHDIVFGVGPAGTGKTYLAVVMAVDAWKKGNVS
                     KIILTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYDIFGTEHTTRLMDRGVIEIA
                     PLAYMRGRTLDHAFVILDEAQNTTIAQMKMFLTRLGYDSKMIVNGDMTQIDLPKGATS
                     GLVNAEQVLKDVKDIGFVYFEHHDVVRHPLVAEIIKAYEGKQN"
     gene            11062..13218
                     /gene="pgpH"
                     /locus_tag="U0308_001794"
     CDS             11062..13218
                     /gene="pgpH"
                     /locus_tag="U0308_001794"
                     /EC_number="3.1.4.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP phosphodiesterase PgpH"
                     /protein_id="HEM2316757.1"
                     /translation="MKLAKKWRDWYIESGKKYLFPLLLVCFAVVAYFLVCQMTKPESY
                     NVKLFQVAEKTIRSPQTVEDTEKTKEERTKASDAVEDVYVYNRETGQNRVALIQSLFA
                     YVNEVNAEAQEKDTKNKEKAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITSNISD
                     EVFTTLIEAKSKDFNVMEDVVTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYY
                     KNVSKALVSYAIVPNEVYDEEQTDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYR
                     QLKMLHLLDQKMPVKQYAGFAIFIIALAAILFLYTKKQTQPKAKKMQTMLIFSSVYLV
                     SLFMLLIILFLETQNIANIAFLFPAAFAPMILKILLNEKYAFLSVIFIAVTSLLTFQN
                     DATSGITIFILLSGATSVVVLRDYSRRSAIMLSGFMVGLINMVYVLLLLLINNSTLLQ
                     VSTLMAIGYAFLGGFGAFILGVGVIPLFETIFGLLTTSRLVELANPNHPLLKKILMKA
                     PGTYHHSMMVANLAEACADKIGANSLLVRVGCFYHDIGKTLRPPYFVENQLQGINPHD
                     RLTPEQSRDIILSHTKDGAEILKENHMPQPIIDIALQHHGTTLLKYFYFKAKETNPDV
                     KEADYRYSGPKPQTKEIAIINISDSVEAAVRSSTEPTMAKITEIIDGIIKDRFLDGQF
                     TECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD"
     gene            13235..13720
                     /gene="ybeY"
                     /locus_tag="U0308_001795"
     CDS             13235..13720
                     /gene="ybeY"
                     /locus_tag="U0308_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEM2316758.1"
                     /translation="MTVLEIDLLDETKNLLDEDKQLVENILQFAAEYLKIEQGTELSL
                     TFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIIS
                     TEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKIMFGLQKEVLDAYGLE
                     R"
     gene            13698..14093
                     /locus_tag="U0308_001796"
     CDS             13698..14093
                     /locus_tag="U0308_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEM2316759.1"
                     /translation="MLMDLKDRKYKRSKNYAESFHHAFTGLKTAFLEERNMRFHTFAA
                     LAVVICGFFFHVTKSEWILLILSIFGVLTLEMVNTAIERAVDVATEQYIDEAKKAKDV
                     AAGAVLLAAIVASFIGLIIFIPYFCQMFL"
     gene            14118..14513
                     /locus_tag="U0308_001797"
     CDS             14118..14513
                     /locus_tag="U0308_001797"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HEM2316760.1"
                     /translation="MKENNFISLAKQAREFAYVPYSKFPVGAALVTKDDEVVLGCNIE
                     NASFGLTNCAERTAIFKAVSEGKRDFKQLVVVADTDGPVSPCGACRQVISEFCAPDMP
                     VILTNLTGKTATVTVKELLPGAFTSEDML"
     gene            14510..15415
                     /gene="era"
                     /locus_tag="U0308_001798"
     CDS             14510..15415
                     /gene="era"
                     /locus_tag="U0308_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEM2316761.1"
                     /translation="MSEPFKSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRN
                     KVQGVYTTDESQIIFIDTPGIHKPKHKLGDFMVKIALNTFQEVDLIYFVIDASTGFGR
                     GDEFIIEKLKNVQTPVFLLINKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNV
                     PNLLEQTNANLEIGPMYYPKDQITDHPERFIISELIREQVLQLTREEVPHSVAVVIEG
                     IEKNPKTEKLTINATIIVERSTQKGIIIGKQGQMLKQIGMRARKEIERLLGSKVFLEI
                     WVKVQKNWRDKEHYLQDYGFDREEY"
BASE COUNT         5520 a         2672 c         3156 g         4196 t
ORIGIN      
        1 gtataaagtt aataaagaaa ataagcaaaa ttaactacta ttggaggaat tcacgatgaa
       61 aaataacgta ttagtaacag gcggaactgg atttttagga atgcatatta tctttcaatt
      121 attgcaacaa ggctatcaag tcaaaacaac cgtacgctct ttaaaaagca aagaaaaagt
      181 aatagaagta ctgcaaaata atggaataac ggattttacg caattatcct ttgtcgaact
      241 tgatttatcc aaagatgaag gatggaaaga agcaatgctc gattgtaaat atgtgctaag
      301 tgtcgcatct ccagtatttt tcggtaaatt taaaaatgaa gaagaattaa tacgcccagc
      361 aatagaaggt attacaagaa ttttacaggc cgcaaaagag gcaaaagtaa aacgagtagt
      421 tatgacttcg aattttggcg ctattggttt tagcaacgca gataaaaata gcattacaac
      481 agaagcatat tggaccgatg aactcgctaa gggtttgtca gcatatgaaa aatctaaact
      541 aattgcagaa aaagaagctt ggaaattcat ggaaaatgaa acagaattgg aatttgctac
      601 catcaatccg gttgccattt ttggtccatc acaaagcagt catgtctccg gaagctttga
      661 cttattaaaa aatctgttaa atggttctat gaaacgtatc ataaatattc cgttaaacgt
      721 agtagatgca cgagatgttg ccgatttaca tattcgcgca atgattactc ctgaagcaaa
      781 cggagaacgt tttattgctt cagctgacgg agaaattagt atggcagata tcgcacattt
      841 gcttcaacga gagcgtcctg aactagtgag taaaatgccg aaaaaaacat tgccaaatgc
      901 cgctataaga gcagctgcta tatttagtaa acacgccaaa gaaggcgagt tgatgattaa
      961 tatgaatcgg caaataagca attcaaaagc gagagatctt ttaggatggc agccgatttc
     1021 gacaaaagaa gaagccgttc ttgctgcagt ggatagtttg gcaaagtatg gtttattaga
     1081 ttaaaagcga atcctgcacc aaagcactgg aaaatatgtt aaactgacta atggacaacg
     1141 aagcaaattt taagtgcaag gaattgataa aaatgataaa tacgaaccaa tcgagtaagg
     1201 aaagttccgc ggtatatatc catattccgt tttgcgaaca tatttgctat tactgcgatt
     1261 ttaataaagt attcttagaa ggacaaccgg tcgacgaata cgtagattta ctaattaaag
     1321 aaatggaatt aactgctgca aaaggaccta ttgcgccagt cgacactgta tttgttggtg
     1381 ggggaacgcc tacaaccctg aacgaagcgc aaattgcgag actttgcaca gccatccata
     1441 acattctacc tctaaaaaaa gatatcgaat tttcctttga agccaaccca ggagatcttt
     1501 cgctatctaa attacaagcc atgcaagatc atggcgttaa tcgtatcagt atgggagttc
     1561 aaagcttcaa caatgaactt ctcaaaaaaa ttgggcgcat tcatactgta aaagatgttt
     1621 atcaatctgt ggaaaatatg cgcaaaatcg gatttgaaaa tgtaagcatt gatttaatct
     1681 ttagcttgcc tggtcaaaca gaagcagatt tccaagatac attaaaacaa gcgcttgacc
     1741 ttgatttacc gcattactcc gcctattcat taatcatcga accaaaaacg attttttata
     1801 accttatgca aaaaggaaag cttttcttac ctggtcaaga tgccgaggca aatatgtacg
     1861 atttacttct caacgaaatg gaaaagcacg gtcgtaaaca atatgaaatt agtaattttg
     1921 ccaaagaagg atttcagagt aaacacaata tcacttattg gagcaatgaa cattactacg
     1981 gatttggcgc cggagcacat ggctatgttg gcaatacacg ttatagtaat ttcggaccaa
     2041 tcaaaaaata catggaacca ctccaaaaaa atatactccc aacattccaa caaaaagagc
     2101 ttacattaaa agaaaaaatg gaagaagaaa tgtttttagg gcttagaaaa gtggacggcg
     2161 tagataaaaa acatttcaaa caaaaattcg gccaagattt agatgcaaca tttgcgaatg
     2221 ctattcaaaa aacaaccgca aaaggctggc tcgaaaataa cgaagaaaat gtggcactta
     2281 caagaagtgg aagattttta ggaaataatg tttttcaaga atttctctaa aaccgcacta
     2341 tttgaccttt tttgaccaaa caatccaact ttagtctgaa atcgagtgtt ttcggttgac
     2401 taaggtggaa ttgtttggta aatttatact tgtatttagc acttgacgtt atggagtgct
     2461 aaaagaggtg attgctatgt taacagaaag acaacttttg atttttcgtg ccatcatcga
     2521 tcatttcact tggactattc agccagttgg atcaaagaat ttgctgaaag aaaaaggttt
     2581 gccttatagt tccgcgacta tccgtaatga aatgggcgtt ctcgaagaat acggttttat
     2641 tgaaaagacg cattcctcat cgggacgagt tccatcagag aaaggatatc gcttctatgt
     2701 cgattattta ctccagccca aaaagctaga taaatccgac aggcaaatga ttcgttcctt
     2761 cttttcagag aactactacg aaatggaagg acttatccaa aattcagcat taatgttatc
     2821 cgatttaacc aattacacgt ccattttgct tggtcctgaa gcgacgaaaa atcatttaag
     2881 tggctttaga tttgtaccaa taaataattt tcaagcaatg ctcatattaa ttaccgatca
     2941 agggcatgtt gataaccatt tggtgacaat accagaaggc acaacgctct ccgatattga
     3001 acgtatggtc aacattctaa atgaacggtt agtaggactt tcgcttgatg atttaaaagt
     3061 acaaataccc atggaagtaa aggaattact tgggaagcat gttagaaatt acgaaagctt
     3121 tatgcatgtg ttttccgatt cttttgctca agcaagtcaa caaaaagtgt attttggcgg
     3181 aaaaacgaat attttaaatc aaccggaatt tcatgacatt aataaagtcc gtgagatgct
     3241 tcatttgatg gaagaagaac aagatgtgta tgaattgttt agggatattc ccgatggtct
     3301 tcaagtgaaa attggccgag aaaacaataa tagtctaatg gaagattgta gtatcattac
     3361 agcaacatat aatattgctg gcgaacgcgt tggcggtatt gtactcctag gacccacaag
     3421 aatggaatat agcagaatga tgggactcgt tgatgtgatg agccgagatt taaccgatgt
     3481 gttaaccaaa ctttatcgtg ataaccaaaa ttaggaaggc tgaaaaagca cacgtttttt
     3541 caggaggtgg ctaaagtgtc tgagaaaaag aacaaaaaag aaagactagc tgatgaaatc
     3601 gaacaagaag aattaaacat tctagatgaa acagaagaaa ctgttgaaga agaggctgcg
     3661 gctgacactt taacagaaga acaagcaaaa attttagagc ttgaaaacaa acttgatgaa
     3721 gtagaaaatc gctaccttcg catgcaagcg gacttcgaaa atgtgaagaa aagacatatc
     3781 gcagaccgtg atgccagtca gaaatatcgt tcgcagagcc tagcgcaaga tttacttccc
     3841 gcactagaca gttttgaaaa agcacttgca acgacttctg atcaggaaga agtgaaacaa
     3901 attttaaaag gaatggaaat ggtatacaac caaatccttg ttgcttttga aaaagaaggt
     3961 attgaagtca ttccagctgt cggcgaacaa tttgacccga acttccatca agccgtaatg
     4021 caagatagtg atgaaaatgc aggaagcaat gaaatcactg cggaacttca aaaaggttat
     4081 aaacttaaag accgggttat acgcccatct atggtaaaag taaatcaata aaaaataatt
     4141 actgaataac aggaggaaat aacaatgagc aaaattatcg gaattgactt aggaacaaca
     4201 aactctgcag tagcagtatt agaaggcgga gaagcaaaaa tcatccctaa cccagaaggc
     4261 gcacgtacaa caccttctgt cgttggtttc aaaaatggcg aacgccaagt tggtgaagta
     4321 gcgaaacgtg ctgctattac aaacccaaat acaattagtt ctattaaacg tcacatgggt
     4381 actaactata aagaaacaat cgaaggaaaa gattactcac cacaagaaat cagtgcaatc
     4441 attttacaat atctaaaaag ctacgcagaa gactatcttg gtgaaactgt agataaagct
     4501 gttattacag ttccagctta cttcaacgat gcgcaacgtc aagcaacaaa agatgctggt
     4561 aaaatcgctg gtcttgaagt ggaacgtatt attaacgaac caacagcagc agctcttgct
     4621 tacggtatgg ataaaacaga aacagaccaa acaatcctag tatttgacct tggtggtggt
     4681 acatttgacg tatctatcct tgaattaggt gacggcgtat tcgaagtaca ttctactgcc
     4741 ggcgacaacg aattaggtgg agatgacttc gataaaaaaa tcatcgacta tttagtagca
     4801 gaattcaaaa aagataatgg tattgactta agccaagata aaatggcgct tcaacgtttg
     4861 aaagatgctg ctgaaaaagc gaaaaaagat ctttctggcg taacaagcac acaaatctcc
     4921 ttaccattta tcacagctgg agaagctggt ccacttcact tagaagtaac ccttactcgt
     4981 gctaaatttg atgaattaac acatgactta gttgaacgta ctattgcgcc aactcgtcaa
     5041 gcattaaaag atgcaaactt gtctgcaagc gatattgacc aagtaattct agttggtgga
     5101 tctactcgta ttcctgcagt tcaagaaaca atcaaaaaag aattaggcaa agaacctcat
     5161 aaaggtgtaa acccagatga agttgtagca atgggtgctg caattcaagg tggcgtaatc
     5221 actggtgatg taaaagacgt tgtactactt gacgtaactc cattatccct tggtattgaa
     5281 acaatgggtg gcgttatgac tacacttatc gaacgtaata caactatccc aacatctaaa
     5341 tcacaaactt tctctacagc agctgacaac caaccagccg tagatatcca tgtacttcaa
     5401 ggtgaacgtc caatggcaaa agacaacaaa acattaggtc gtttccaatt agcggatatt
     5461 ccaccagctc cacgcggaat tccacaaatc gaagtatctt ttgatatcga caaaaatggt
     5521 atcgtaacag ttcgtgcaaa agatcttgga actggtaaag aacaaaacat cgttatcaaa
     5581 tcttcttcag gtttaacaga cgaagaaatt gagaaaatgg ttcaagatgc tgaagctaac
     5641 gctgaagaag ataaaaagaa caaagaaaac gctgaacttc gcaacaatgc agaccaatta
     5701 gtattcactg tagataaaac tttgaaagag ttagaaggca aagtggaaga agaagaagtg
     5761 aaaaaagcag aagcagctcg cgatgaacta caagaagcgc ttaaaggtga agattttgaa
     5821 gctatcaaag aaaaaacaga aagcttaaac gaaatcgttc aaaacctatc tgttaaatta
     5881 tacgaacaag ctgcagcaga acaacaagca gctggcggtg cagaaggtca agaggctcct
     5941 caaaatgacg acgtagtaga cgctgaattt gaagaagtaa atgacgacga caaagaaaac
     6001 aaataatctt ttttaaagta aagataatga gtcaaagtct actgtggctt tgacttttta
     6061 tctgaaataa agtttttaca acatctcttt caaatgttac aatacgttag gactataaaa
     6121 atctatcatg gacaggagtg atggcggatg gcaaaacgag attactatga agtgcttggt
     6181 gtttccaaaa gcgcctcagc ggacgaaata aaaaaagctt accggaaact gtccaaacag
     6241 tatcatccgg acataaataa agaagcaggc gctgatgaaa aatttaaaga aatatcagag
     6301 gcatatgaag cattaagtga cccacaaaaa cgtgcgcaat atgatcaata tggacacgta
     6361 gatccaaacc aaggcttcgg cggcggtgct ggtggcggat ttagcggtgg aggattctct
     6421 ggatttgaag atatctttga cacattcttt ggtggcggtg gacgtcaaca agatccaaat
     6481 gccccaagac aaggtagcga tttacaatat actatgcgtc ttaaattcaa agaagctatt
     6541 tttggtaaag atgcagaaat cgaaattcct cgcgaggaaa actgtgacac atgtcatggt
     6601 tccggtgcaa aaccagggac aacacctgaa aaatgtagcc attgtggtgg taaaggttcc
     6661 attaacgtgg aacaaaatac cccatttggt cgtgtagtta acaagcggac atgtcaatac
     6721 tgtaatggta ctggtaaaga aatcaaagaa aaatgcccaa cttgtcacgg taaaggccgt
     6781 gtaactaaaa cgaaaaaaat caaagtgaaa gttccagctg gcgtgaacga cgggcaacaa
     6841 atgcgcgtat ctggtgaagg agaagccggc attaacggcg gacctaacgg cgatttatat
     6901 gtggtatttg tcgtaattcc agatgagttt ttcgaacgcg aagcagatga tatttacgta
     6961 gaagtcccaa tcacattcgt acaagctaca ttaggtgacg aaattgatgt tccaactgtt
     7021 cacggcaaag ttcgtttgaa aattccaagt ggtactcaaa caggaacaac tttccgctta
     7081 cgtggtaaag gtgtgccaca tcttcgagga aatggaactg gcgatcaaca tgtaatcgtc
     7141 aaagtcattg ttccgaaaaa actagatgat aaacaaaaag aaatcttgcg agaatttgct
     7201 tccactactg gagacaaagt agacgaacaa acatccggat tttttgacaa aatgaaacga
     7261 gcttttaaag gcgattgatg aacgtagagg tcgatagttg tgcgagaagc aaccatcgac
     7321 cttttctaca tacaaaagga gtgttaaaaa tggaatggtc agaagtagaa gtccatacaa
     7381 caaacgaagc tgtagaacca gtagctaatg ttttgacaga atttggtgca gcaggagtat
     7441 ccattgaaga tgttgctgat tttttacgtg aacgagaaga caaatttgga gaaatatatg
     7501 cactaagacg agaagattat ccagaagacg gcgttattat taaagcttac ttcttaaaga
     7561 caacagaatt tgtagagcaa attccagaaa ttgaacaaac attgaagaat ctgtctactt
     7621 ttgatattcc gctaggtaat ttccaatttg tcgttaatga tgtggacgac gaggagtggg
     7681 ctaccgcatg gaagaagtat tatcatccag ttcaaatcac tgacaggatc acgattgtac
     7741 caagttggga atcatacacc ccatctgcta acgaaataat cattgagcta gatccaggaa
     7801 tggcttttgg gacaggaaca catccgacaa ctcagctatg tatccgcgca ctgagcgatt
     7861 atttacaacc aggagatgaa gtgattgatg ttgggactgg ttctggcgtc ttaagtattg
     7921 ccagtgctaa attaggtgca aaatctattt tagcaacaga cctcgacgaa atcgccactc
     7981 gtgcagcaga agaaaatatt actttaaata aaactgaaca cattattact gtcaaacaaa
     8041 ataatctact tcaagatatt aataaaacag acgtggatat tgttgttgcg aacattttag
     8101 cagaagttat tttgcttttc cctgaggatg tttatagagc actcaaacca ggcggaattt
     8161 tcattgcttc cgggattatt gaagacaaag cgaaagtagt cgaagaagca cttaaaaagg
     8221 ctgggcttgt tattgaaaaa atggagcaac aaggggactg ggttgcgatt atttccaaac
     8281 gaggagtgga ataaatgcaa cgttattttg taacaaatga gctagagaat gataacgaaa
     8341 cactatccat tactggagaa aacttccatc atattactcg tgttatgcga atgaaagaat
     8401 ccgaccaagt tttcattgtt tttcctagca aaaaaacatg tattgccgct attacagcta
     8461 taaacgatga tgaagtattt ttaaatttag tgaaatggct agaagaagat accgaattgc
     8521 ctatagaaat caccatcgca agtggtctac caaaaggcga caaactagaa ctcatcattc
     8581 aaaaaagtac agaactaggc gcacacaaat ttatccctta taaagcagaa cgatctgtgg
     8641 tgaaatggga tgacaagaaa gtcatcaaaa aaatcgagcg acttcaaaaa attgcgcaag
     8701 aagctgctga acaatcgcac cggacaatca ttccagaagt tcattatgct gctagtttca
     8761 aagagttaat gtttgaccat gttcactatg actttgttat cgcagcatat gaagagagcg
     8821 ccagagaagg tgaggacagc gcgcttgcta acttattcca aaccatgaag cctggacagt
     8881 ctgttttatg tgtttttggg cctgaaggag gcattagcga aaaagagcta atgcaacttc
     8941 aagaagtaaa tgcaaaactc gcaggactcg gcccgagaat attaagaaca gaaaccgcac
     9001 cactctattg tttatccgct gcttctttct attttgatct ttataaaaac aaaaaagaat
     9061 aacatttcaa agttttatgc gaaagttaac gatttcatgt tgacgatgcc cgatgtttcg
     9121 tatataattt ttaatgagtg aatgcttatc tgcattactt cagaataatt cataatttat
     9181 tttccgttat gtcctattct ggaacttaaa tgaaggattt aagtgagtgc atgtaagtgc
     9241 cggagggagg gaaagagaga tgtcaaaaac agtagttcgt aaaaacgaat cgcttgaaga
     9301 tgctcttcgt cgctttaaac gtactgtttc caaaagtgga actttgcaag aatccagaaa
     9361 gcgcgaattt tatgaaaaac caagcgtaaa acgtaagaaa aaatccgaag cagcaagaaa
     9421 acgcaaattc taattaaaag gcgatgattt cgttgacact gcttgacaag ttaaatgaag
     9481 atatgaaaca agcgatgcgc gataaagaga aagaaaaact ttccgttatt cgtatgttaa
     9541 aagcagcttt acaaaacgaa gcaattcacc aaggtgtgaa agatcttact ccggatgatg
     9601 aagtaaccgt gatttcccgc gaactcaaac aacgcagaga ttctctagca gagtttgaca
     9661 aagctggacg taacgacctt tctgataaag tccgttccga gattgtcatt gttgaggact
     9721 acgcgccaaa acaattgact cctgaagagc ttgagaatat tgtgaaagca actatcgaag
     9781 aagttggcgc atctagtaaa gctgatttcg gcaaagtaat gtccgcgatt atgcctaaag
     9841 taaaaggtaa agctgacggt ggtgctgtta accaattcgt aaaaaaatat ctttcataaa
     9901 ctaattcaaa ctagttttga aacattaaga aacaggatta cttcctattt tgtggaggaa
     9961 atcctgtttt tttatgccga tttttacttg aattgcgttg ttgctatcgc ttcgtttttc
    10021 aagcaaggca atttcgtgta taatataact aatcaaggca cttataacag gtgaaggggt
    10081 tagccaatgc taaatgaatt taatgaagta gtcgaattat ctgatgacac aaatattcaa
    10141 gatttattcg gcaataataa taagaatatc gaacttttag aagagttact tcaagtgaaa
    10201 atcattactc ggggagagtc actatctatt acaggcgagg aagagcctgt acagcatacg
    10261 actgccgttt taaatgaact tattttgacg gtaaaacgag gtattcatat tgatggtcga
    10321 gatatcgctc aagcggtaaa aatgcaaaga aacggaacac ttatttactt tcatacctta
    10381 tttgaagaag aaattacgaa gaatgcaaaa ggaatgccaa ttaggccaaa aacattcgga
    10441 caaagaactt atattcaaat gattaaaaaa catgacatcg ttttcggcgt tggtccagca
    10501 ggtactggta aaacctatct agcagtagtt atggcagtag atgcatggaa aaaaggaaat
    10561 gtgagcaaaa tcattttaac aagacctgcc gttgaagctg gcgaaagttt aggttttttg
    10621 cctggagatc taaaagaaaa agtagatcct tatctacgcc ctgtgtacga cgcgttatat
    10681 gacatttttg gtacagagca tacaacaagg ttaatggacc gaggcgtcat tgaaatagct
    10741 cctctggctt atatgcgtgg ccgtacactt gatcatgcct ttgtcatttt agacgaggcg
    10801 cagaatacga ccattgccca aatgaaaatg tttttaacac gacttggtta tgactccaaa
    10861 atgattgtca atggagatat gacacaaatt gacttaccaa aaggtgcaac tagcggtctt
    10921 gtcaatgcag aacaagtttt aaaagatgta aaagatatcg gttttgttta ctttgaacat
    10981 catgatgtag tcagacaccc actcgttgct gaaattatta aagcttatga agggaaacaa
    11041 aattagagag gagacaaaga tgtgaaacta gccaagaaat ggagagattg gtacatcgaa
    11101 agtggaaaga aatacctttt tccgctgctc cttgtttgct ttgcagttgt agcttatttt
    11161 ctcgtttgcc aaatgacgaa accggaatct tacaatgtta aactattcca ggtggctgaa
    11221 aaaacaattc gttcacctca aacggtggaa gatacagaaa aaacaaaaga agaaagaacc
    11281 aaagcaagcg atgctgtaga agatgtgtat gtctacaatc gcgaaactgg tcaaaaccga
    11341 gtagcactta tccaaagttt atttgcctat gtaaatgaag taaacgcaga agcgcaagaa
    11401 aaagatacca agaataaaga gaaagcaaaa aaagagaata agcctgctcc tgcgccaaca
    11461 tcaactgaag ataaattaaa aaacttaaaa gacaaattat ctagtaacgt atctgaaaaa
    11521 ataacttcta acatatctga cgaagttttc actactttaa tcgaagcgaa aagtaaagat
    11581 tttaatgtca tggaagacgt ggttacaaca gaagttgaaa aatccatgga aaataaaatc
    11641 cgagatgaaa acttgaattc tgtaaaaatt agagctcgtg atgatattga actttcagcg
    11701 atacccgctt actacaaaaa tgtctcaaaa gccttagttt cctatgctat cgtaccgaat
    11761 gaagtttacg atgaagagca gaccgatgca cgacgtaaag aagctgcgca atccgttgtt
    11821 cctgtgaaaa tcttacaagg gcaagttatt gttcaagaag gccaaattgt agatagagaa
    11881 acatatcgtc agctaaaaat gctacattta cttgatcaaa aaatgcctgt aaaacaatac
    11941 gctggatttg cgattttcat tattgcttta gcagcaattc tattccttta cacgaaaaaa
    12001 caaacacaac ctaaagcgaa aaaaatgcag acgatgctta ttttttcttc ggtttatctt
    12061 gtttctttgt ttatgttatt aattatttta tttttagaaa cgcaaaatat cgcgaatatt
    12121 gctttcttat tcccagccgc ctttgccccg atgatactca aaattttact caatgagaaa
    12181 tatgcctttt taagcgtcat ttttattgct gtaactagtt tgttaacatt tcaaaatgat
    12241 gctacaagcg gcataactat ttttatttta ttgagtggcg cgacgagtgt tgttgtgtta
    12301 cgcgattata gtagacgttc ggctattatg ttgtctgggt ttatggttgg tttaattaat
    12361 atggtttatg tgttactttt attattaata aataacagca cactgttgca agtttctaca
    12421 ctaatggcca ttggatatgc ctttttaggt ggatttggcg catttattct cggagtagga
    12481 gttattccgt tattcgaaac gatttttgga ttgttaacaa cgagtcgttt ggtcgaatta
    12541 gctaatccaa accatccatt attgaagaaa atattaatga aagctcctgg tacgtatcat
    12601 catagtatga tggtagctaa cttagcagaa gcatgcgctg acaaaattgg tgccaatagt
    12661 ttacttgttc gtgttggctg tttttatcat gatataggaa aaacattaag accaccttat
    12721 tttgtggaaa atcaattgca aggaataaat ccgcacgata gactgacacc agaacaaagt
    12781 cgtgatataa ttctttcgca tacaaaagac ggagcagaga ttttaaaaga aaatcatatg
    12841 ccacaaccaa ttattgatat cgcactccaa catcacggga cgacactgct taaatatttc
    12901 tattttaaag cgaaagaaac aaatccagat gtgaaagagg cagattatcg ttacagtggt
    12961 ccaaagccac aaacgaaaga aatcgccatt atcaatatat cggatagtgt tgaagcggca
    13021 gttcgttctt ccacagagcc aaccatggca aaaataacag aaattattga cggaatcatt
    13081 aaagatcgtt tccttgatgg gcaatttaca gaatgtgata ttacaataca agaaattaaa
    13141 atcattcgtg acaccttaat cgccacatta aatggaatat atcatcaacg aattcaatat
    13201 cctgatgaca aagattgaaa taggaggaca aaagatgacg gtcttagaaa ttgatttact
    13261 agacgaaact aagaatttac ttgatgaaga taaacagcta gttgaaaata ttttacaatt
    13321 tgcggctgag tatttaaaaa tcgaacaagg gacagagctg tcactcacct ttacaacgaa
    13381 tgaaggtatt cgtgagatta accgagaata tcgggataaa gatcaagcaa ccgatgttat
    13441 ttcgttcgcg ctagaagaaa tgggcgacgg ggaaacggag attgattggg gcgaatttga
    13501 tcttgaaacg cctcgtatgc ttggcgatat aattatttcg actgaaaaag cagaagagca
    13561 agccaaagat tacggacata caaaagcaag agaattaggt ttcttagcag ttcatggatt
    13621 gctgcacttg cttgggtatg atcatatgga gcctgacgaa gagaaaatca tgtttggctt
    13681 acaaaaagaa gtgttggatg cttatggact tgaaagatag aaaatacaaa cgtagtaaaa
    13741 attatgcaga atcttttcat catgctttta ctggactaaa aactgctttt ttagaagaac
    13801 gtaatatgag atttcatact ttcgcagcgc ttgctgttgt catctgtggc tttttctttc
    13861 atgtaactaa atctgagtgg attttattaa tcctttctat ttttggtgtg ttaacgctag
    13921 agatggtgaa cacagcgatt gaacgagcgg tagatgtggc gacagaacaa tacattgatg
    13981 aggcgaaaaa agcgaaggat gtagctgccg gagcggtact gttagcagca attgtagcaa
    14041 gttttattgg actgattata ttcataccat acttttgcca gatgttttta taaaaagaag
    14101 ggattgtgac ttggtaaatg aaagaaaata attttatctc actcgctaaa caagcaagag
    14161 aatttgcgta tgttccttac tcgaaatttc cagtaggagc agctcttgtt acgaaagatg
    14221 acgaggttgt acttggctgt aatatcgaga atgcatcatt cggtttaaca aactgcgcag
    14281 aacggacagc tatttttaaa gctgtatcag aaggaaaacg agattttaaa cagttagttg
    14341 tcgtagcgga tacagacggt ccagtttcgc cgtgtggggc atgcagacaa gtcatcagtg
    14401 aattttgtgc gccagatatg ccagtaatat taacaaactt aacagggaaa acagcgacgg
    14461 taacggtgaa agaactttta ccaggcgcat tcacatcgga ggatatgtta tgagtgaacc
    14521 atttaaatca ggatttgtag ctatagttgg gcggcctaac gttgggaaat caactttatt
    14581 aaatcacatc attggccaaa aaattgccat tatgagtgat aaagctcaaa caacaagaaa
    14641 taaagtacaa ggtgtttata caacagatga atcacaaatt atttttattg atacaccagg
    14701 tatacataaa ccaaagcata aattaggcga tttcatggtg aagattgcgc taaatacgtt
    14761 ccaagaagta gacttaattt atttcgtaat cgacgcatct accggatttg gacgcggaga
    14821 tgaatttatt attgaaaaac ttaaaaacgt acaaacacct gtttttcttt tgattaataa
    14881 gattgattta attgctccag aagatttatt caagttaatt gaacagtacc gcgatttgat
    14941 ggactttgat gagattattc ctatttcagc acttcaagga aataacgtgc ctaacttact
    15001 agaacaaacg aatgctaact tagaaatcgg accaatgtat tatccaaaag atcaaatcac
    15061 ggaccatcct gagcgtttca tcatctcgga gttaattcgt gaacaggttt tacaattaac
    15121 acgagaagaa gttccacatt ctgtagcagt ggttattgaa ggaattgaaa aaaaccctaa
    15181 aacagaaaaa cttacaatca atgctacaat tattgtagaa agaagcacgc aaaaaggaat
    15241 tattattggt aaacaaggtc aaatgctaaa acaaattggt atgcgtgcta gaaaagaaat
    15301 tgaacgctta ctcggctcca aagtcttctt agaaatttgg gtaaaagttc aaaaaaactg
    15361 gcgcgataaa gagcattatt tgcaagatta cggtttcgac cgcgaagagt attaaaaaag
    15421 catctggcgc acaattgggt ttgtgcgcca gatgctttta attattcttt atttgtagtc
    15481 cagctatagt tatcatattc tacatcatat ggtccaaggt tatacacttc atagtaaagc
    15541 gtta
//
LOCUS       DASDYK010000059        15265 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.059, whole genome shotgun sequence.
ACCESSION   DASDYK010000059 DASDYK010000000
VERSION     DASDYK010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15265
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.059"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(199..927)
                     /locus_tag="U0308_001799"
     CDS             complement(199..927)
                     /locus_tag="U0308_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2316762.1"
                     /translation="MAQNQTKYSFIAEEIRKRIMNHAYPLNQPIPDEITLAKEFDCSR
                     MTMKKALEVLVLEGLLYRKRGHGTFIIKSALDADRLQIHNQEVNGFTKLLNGKKVISK
                     VIEFKVIFPTEEIAERLHIEMETPIYDILRVRLVKDEPYVLEHTYMPVGVIPGINQQI
                     LEGSIYSYIQDDLNLKIASSYKQIRADKATLLDQQYLDCASDDPVVEVEQTVYLNNGL
                     AFEFSKSRHRYDKFVFTTVNIARR"
     gene            complement(971..2365)
                     /locus_tag="U0308_001800"
     CDS             complement(971..2365)
                     /locus_tag="U0308_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2316763.1"
                     /translation="MTYKFPENFWWGSAASGPQTEGAANVDGRKPSIWDHWYKIEPGR
                     FFNDVGPTNTSNFYYQYKEDIALMKQTGHNSFRTSIQWSRLIPDGIGEVNPKAVDFYN
                     RVIDEMLANDVEPFMNLYHFDMPMSMQEKGGFESREVVDAYATFAKTCFELFGDRVKH
                     WFTFNEPIVPVEAGYLYDMHYPNVVDFKRATQVAYHTTLAHALAVKEFHALEIPEGQI
                     GIILNLTPSYPRSQNPADLKAAHIADLIFNRSFLDPVTKGEFPADLVEIIREHDALPE
                     YTEEDLAIIKNNIIDILGVNYYQPRRVKAKEYAAHPDAPFMPEHLFDNYEMPYRKMNP
                     YRGWEIFERAIYDIAINLRDNYDNIPFFISENGMGVEGESRYRNADGMIEDTYRIDFI
                     KSHLKWLHKAIEEGSNCHGYHLWTFMDCWSWANAYKNRYGLVEVDLDNNFKRTIKASG
                     HWYKELSENNGFED"
     regulatory      2486..2587
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00167"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="purine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="guanine and/or adenine"
                     /db_xref="RFAM:RF00167"
     gene            2681..3976
                     /locus_tag="U0308_001801"
     CDS             2681..3976
                     /locus_tag="U0308_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEM2316764.1"
                     /translation="MDKFFKLRENKTTVRTEILAGLTTFLSMAYVLFVNPSMLATTGM
                     ELKAVFVATILASVVGSLAMGLIANYPIGLAPGMGLNAFFAYTVCAQWGIPWQTALAG
                     VLVSGLVFICLTISGLREKIVNAIPTELKFAVGAGIGFFIAFLGLKNAGIIVPNESTI
                     VALGDLHSGPVLLAVFGIVVTVAYMTIGWKGAIFFGMATTAVAGMLFGLIDVPTQVVS
                     SVPSMESTFGQAIIHLPDIFTPQMLIVILTFFFIDFFDTAGTLVAVATQAGFVKDNKI
                     PRAGRSLFSDSLATVFGAIFGTSTTTSYVESTAGVAVGGRTGLTAVVIAICFSLSLFF
                     SPLLGVITSAVTTPALVIVGILMIGNVAHIDWTKFEVAVPSFFVILMMVLTFSIATGI
                     AIGFIFYPITMVLKGRYKEVHPIMYVMMVLFILYFMFVV"
     gene            complement(4019..5050)
                     /locus_tag="U0308_001802"
     CDS             complement(4019..5050)
                     /locus_tag="U0308_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein"
                     /protein_id="HEM2316765.1"
                     /translation="MPDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTL
                     ASIFLEPFNKDEYYQFTHETDLDFNEVRTFAANMFVAEDEFLDESKKILEHLYSETTH
                     PNIKSGDVWIFFIEGCVVDGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGT
                     DLDKGCLVFNVDHDTGNKVLILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCT
                     DYIKQREESLLDKSNFVKATSEYLAGEETLNIAEFARTTIEKPEEITEFNTMVDTFER
                     ENNVRFPETFQLDEEKREKLSKKIRKTIKLGKNISVVVKDLEQLEETDFVQGYDEEKG
                     KNYMIVYYD"
     gene            5127..5423
                     /locus_tag="U0308_001803"
     CDS             5127..5423
                     /locus_tag="U0308_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HEM2316766.1"
                     /translation="MIPADFEDRVYTVVRQIPRGKVTTYGQIAYMIGFPKNARLVGAT
                     LKHSKRDQITPCHRVINAAGRLVPGWEEQRELLLSEGVTFKENGHVKMKDHFWQ"
     gene            complement(5408..6235)
                     /gene="hisJ"
                     /locus_tag="U0308_001804"
     CDS             complement(5408..6235)
                     /gene="hisJ"
                     /locus_tag="U0308_001804"
                     /EC_number="3.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase HisJ"
                     /protein_id="HEM2316767.1"
                     /translation="MKRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSIVEHAPLS
                     SEFMKNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGYED
                     FTRDFLNEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYGGFEQAQLAYL
                     EGVKQSIEADLGLFKPRRMGHISLCQKFQQFFGEDTSDFSEEVMEKFRVILALVKKRD
                     YELDFNTAGLFKPLCGETYPPKKIVTLASELQIPFVYGSDSHGVQDIGRGYSTYCQK"
     gene            6387..7565
                     /locus_tag="U0308_001805"
     CDS             6387..7565
                     /locus_tag="U0308_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003729310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEM2316768.1"
                     /translation="MNLNKNLPTGTRDKLFREAQAAYKIEQQVNHYFEKRGFKRIETP
                     VIEFEDVFSSEHQADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVMLPLKLSYSG
                     KIFRANEDFGGEQNEQTQAGIEIIGYPSIKAEIECILSGIGVLNALEIPNFQIELGHA
                     AIYRRVIQLLNLSETAEIDFRQLIQNKSLTGIKRFVANNPSTLDDFILAIPRLFGPAT
                     AILNQAKSLTTDKGILTALREMETIVEAVSYTADISVDLGLVQDFHYYTGIIFRGYAD
                     LAADNFLSGGRYDHLLEQFTSSSSPAVGLALNLDSLTTLQNRAGIIKKQTPTTLLIHY
                     DLEALPQAEKFMQETPNSELSFFETASNAISFAKKWHIPEVVHVSSQGIQTIFQREVD
                     "
     gene            7565..8206
                     /locus_tag="U0308_001806"
     CDS             7565..8206
                     /locus_tag="U0308_001806"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEM2316769.1"
                     /translation="MKALKIALTKGRLEKDAVALLEKAGIDCSSMTDKKRKLIFHSST
                     QPISFILVKAVDVMTYVKHGVADIGIVGKDVLMEASKSHYEMLDLEIGKCQFCLASTP
                     DFDPSSYRRKIIATKYPTVASKFFREKGEDVEIIKIEGSVEIAPVLGLADAIIDIVET
                     GSTLKENGLLIYEKMYPISARLIVNKASLKQNKTQIFQLIDQLEQVIKEERAE"
     gene            8203..9486
                     /gene="hisD"
                     /locus_tag="U0308_001807"
     CDS             8203..9486
                     /gene="hisD"
                     /locus_tag="U0308_001807"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEM2316770.1"
                     /translation="MKILTGTVNELLNELKIETDTNTSIQVETEVKTIIEKVKTAGDQ
                     ALFDFTSKFDGVGLTELRVPAADIQAASVKIEPAFLDALQQAKVNIESFHSKQKQHAF
                     LDSEKDGVIRGQLIRPLETVGVYVPGGTAAYPSSVLMNVLPAKIAGVKRIVMITPPGE
                     NGINPYVLASAQLAGVDEIYQVGGAHGIAALAHGTESIPKVDKIVGPGNIYVATAKRE
                     VFGLVDIDMIAGPSEIVVLADENANPAFIAADLLSQAEHDILARAILITTSKKIAEET
                     QNEIDKQLENLPRKAIAQKSIETRGKIIIAATTQEMFDIMNEIAPEHLEVQLENPMNY
                     LYQIKNAGSIFLGSYASEPLGDYFAGPNHVLPTSGTAKFFSPLGVEDFTKRSAFISYT
                     KEALAKEKDAIVLLAKKEGLDAHAKAIQIRFEEEN"
     gene            9487..10071
                     /gene="hisB"
                     /locus_tag="U0308_001808"
     CDS             9487..10071
                     /gene="hisB"
                     /locus_tag="U0308_001808"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEM2316771.1"
                     /translation="MRTATKTRITAETSIELSINLDSQAESIISTGVGFLDHMLTLFA
                     KHSRITLNVKADGDTYIDAHHTVEDIGITLGLCLKEALADKASINRYGSAYVPMDESL
                     GFCALDLSGRSYLVFDAELTNPKLGDFDTELVEEFFQAVAFNTEMNLHLRVLYGKNTH
                     HKIEALFKAFGRALREAITINPEIKGVNSTKGVL"
     gene            10072..10698
                     /gene="hisH"
                     /locus_tag="U0308_001809"
     CDS             10072..10698
                     /gene="hisH"
                     /locus_tag="U0308_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEM2316772.1"
                     /translation="MIVIIDYDTGNTKSISKALDFIGLQNKISSDKTEIAQADGVILP
                     GVGAYPEAMQELTRRGLDKTLKEIATAGKPILGVCLGMQLLLESSNEHSYTKGLGLIP
                     GHVEMLPDESEFAVPHMGWNQLQIKRTTPLTQNIAGEYVYYVHSYYANCPEAYIIATS
                     GYSIDIPGMINNGNIYGAQFHPEKSGQIGLEILKGFKEVIRSCKSSQQ"
     gene            10677..11399
                     /gene="hisA"
                     /locus_tag="U0308_001810"
     CDS             10677..11399
                     /gene="hisA"
                     /locus_tag="U0308_001810"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEM2316773.1"
                     /translation="MQIFPAIDLKNGQCVRLFQGDFSKKTVVNEDPIAQAKAFATDGA
                     TYLHIVDLDGALEGRPINLEIIQRMKKAAKIPVQVGGGIRSMAQVDYYLESGIDRVII
                     GSAALTDPDFLRAAVQKYGAKIVAGIDAKNGFVATRGWLDVSQVSYLDLAKRMEKVGV
                     ETIIYTDISRDGTLTGPNLEQMANLKEHVKVSLIASGGVSSRADLEALAQLGLYGAIA
                     GKALYNHDISMSDIVEVEQIAY"
     gene            11389..12144
                     /gene="hisF"
                     /locus_tag="U0308_001811"
     CDS             11389..12144
                     /gene="hisF"
                     /locus_tag="U0308_001811"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEM2316774.1"
                     /translation="MLTKRIIPCLDVTAGRVVKGVNFVSLTDVGDPVEIAKAYNEAGA
                     DELVFLDITATVELRQTMIDVVERTAEQVFIPLTVGGGISSVSDMKELLQAGADKISL
                     NSAAIKRPELIQEGAAKFGNQCIVVAIDAKWNGTNWSVFTRGGRNDTGLDAIEWAKKA
                     VQLGAGEILLTSMDGDGTKNGYDIPLTKAISAAVSVPVIASGGCGNAAHMAEVFEKTK
                     ATAALAASIFHYGELSIKNVKTTLLEKGVNIRP"
     gene            12141..12458
                     /gene="hisI"
                     /locus_tag="U0308_001812"
     CDS             12141..12458
                     /gene="hisI"
                     /locus_tag="U0308_001812"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEM2316775.1"
                     /translation="MTSVDFSKGLVPTIILDDQNGDVLMLAYMNEESYQKTLETGYTW
                     FFSRSRNELWNKGATSGHTQKVKQIWTDCDNDTLLIRVTQIGPACHTGKKSCFFNLIK
                     EDF"
     gene            12459..12770
                     /gene="hisE"
                     /locus_tag="U0308_001813"
     CDS             12459..12770
                     /gene="hisE"
                     /locus_tag="U0308_001813"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEM2316776.1"
                     /translation="MLNDLYEEIKLRKTQPREGSYTNYLFDKGLDKILKKVGEEATEV
                     VIAAKNNEQELIAEVSDLTYHLLVLLAEQNIPLSKIQAELQNREGKLSTTRDRKEIND
                     L"
     gene            13263..14639
                     /gene="gdhA"
                     /locus_tag="U0308_001814"
     CDS             13263..14639
                     /gene="gdhA"
                     /locus_tag="U0308_001814"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEM2316777.1"
                     /translation="MAQTSTIQNDTKAAEEYAARVFETIKLRNPGETEFHQAVEEFLN
                     SVIPALAKEPKYEANGILEQLTEPERLISFRVPWVDDSGTVHVNRGYRVQFNSAIGPY
                     KGGLRFHPSVTGSIVKFLGFEQIFKNSLTGLPIGGGKGGSDFDPKGKSDSEVMRFCQS
                     FMTELQKHIGPDTDVPAGDIGVGGREIGYLFGQYKRLRGAYDAGTITGKGLSYGGSLA
                     RTEATGYGLVYFTVEMLEAAGETIRGKKIVVSGSGNVAIYAIEKAHELGAKVVACSDS
                     AGFVYDKEGIKVETVKQLKEVERKRISEYTTIHPSAEYYAGGDVWSVPCDIALPCATQ
                     NEINADQARALVKNGVIAVAEGANMPSTLDAVDIYHENKVLFGPAKAANAGGVAVSAL
                     EMAQNSTRMSWTFQTVDEHLQNIMKDIYKNSSNAASEYGAPGNLVIGANIAGFLKVAD
                     TMISQGII"
     gene            complement(14682..>15265)
                     /locus_tag="U0308_001815"
     CDS             complement(14682..>15265)
                     /locus_tag="U0308_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEM2316778.1"
                     /translation="LKESDDVTIFQFLFSSLYFIMDAFFPYVEEMDTDRRTINDKLKI
                     KTTKKNLLSLSDLETGIVYFVSASKQNAALLEQMKAHLIYRELNEVEKEQFEDALIEA
                     RQLVEMTGLSSQILQQLSGTYNNILNNNLNDTMKILTALSILLTVPTIITGFFGMNMP
                     LPLEHNTFGWIVTIFISVILWFGLSFILRKLMR"
BASE COUNT         4681 a         3225 c         2797 g         4562 t
ORIGIN      
        1 ttaaaatctg tacataattg ggctaaatat tataaaagaa ctctaaacta ttagcaagtg
       61 tataaatatg tctatattgt gaacgattct attcttttaa aaaaagtgaa tctaataatg
      121 acctatactt cattaattct tcctaaaaaa agaaactaga taaaatgatt tctcactttt
      181 tctagtttct tttttacttt atcgtctagc tatattcact gttgtaaaca cgaatttatc
      241 ataacggtgg cgcgatttgg aaaattcaaa cgcgagacca ttgtttaaat acacggtttg
      301 ttctacttcg acaacgggat catcagaagc gcagtcgaga tattgctgat caagcagtgt
      361 cgctttatcc gcgcgaattt gtttatagga actagcaatt tttaggttca aatcgtcttg
      421 aatgtacgaa taaatcgacc cctctaaaat ttgctgattg atgcctggga taaccccaac
      481 tggcatatac gtatgttcta gcacatatgg ctcatctttc actagccgaa cacgaagaat
      541 gtcatagatt ggtgtttcca tttcgatatg aagacgctct gcaatttctt cagttggaaa
      601 gataacttta aactcaataa ctttactaat aactttcttg ccgttcaaaa gtttagtgaa
      661 gccgtttacc tcttggttat gaatctgtaa gcggtccgcg tccagcgccg atttgataat
      721 gaaagtacca tgtccgcgtt tacgatatag taagccttca agaacaagga cttccagtgc
      781 ttttttcatt gtcattcgac tacaatcaaa ctctttcgcc aaagttatct catcaggaat
      841 aggttgatta agcggatagg cgtgattcat aattcttttg cggatttctt cagcaataaa
      901 gctatatttt gtctggttct gagccacgga agttcacctc tttacacata atacttttat
      961 tttatcacat ttagtcttca aaaccattgt tttctgaaag ttctttgtac caatgtccgg
     1021 atgcttttat agtacgtttg aaattattgt ctaaatcaac ttctactaag ccataacggt
     1081 ttttgtaagc attcgcccag ctccagcaat ccatgaatgt ccaaagatga taaccatgac
     1141 agttagaacc ttcttcaatg gctttatgca gccatttcaa gtgactctta atgaaatcga
     1201 ttcggtacgt atcttcaatc attccgtctg cattacggta gcgactttcg ccttctacac
     1261 ccataccatt ttcagaaatg aagaatggaa tattatcgta gttatcacgc agattaatcg
     1321 caatatcata aattgctctt tcgaaaattt cccaaccacg atatggattc attttgcggt
     1381 aaggcatttc atagttatca aaaagatgtt ctggcataaa tggtgcatcc ggatgagctg
     1441 cgtattcttt cgctttcaca cgacgcggtt ggtagtagtt tacaccaaga atatcaataa
     1501 tgttgttttt aattatcgcc aaatcttctt cagtatattc tggaagcgcg tcatgttcgc
     1561 gaataatttc aacaaggtca gctgggaatt ccccttttgt aaccggatca aggaaactac
     1621 ggttgaaaat tagatctgca atatgagctg cttttaaatc tgccggattt tggcttcttg
     1681 gatacgacgg tgttaagttt aaaatgattc caatttggcc ttctggaatt tcaagtgcgt
     1741 ggaattcttt aacagcaagc gcatgtgcca aagtagtatg gtaagcaacc tgagtcgcac
     1801 gtttaaaatc aacgacattc ggatagtgca tatcgtataa gtaacctgct tcaacaggaa
     1861 caattggttc attaaaagta aaccaatgtt tcacacgatc tccgaataat tcaaaacatg
     1921 ttttcgcaaa agttgcatac gcgtcaacta cttcacggct ttcaaaaccg cctttttctt
     1981 gcatcgacat tggcatatca aaatgatata aattcataaa tggttccacg tcatttgcaa
     2041 gcatttcatc aataacgcga ttgtaaaaat caaccgcttt cggattcact tcgccaatac
     2101 catctggaat aagacgtgac cactgaattg aagtacggaa agaattatgc ccagtttgtt
     2161 tcattaaagc aatatcttct ttatattgat agtaaaaatt agatgtattc gtaggtccta
     2221 catcgttaaa gaaacgacct ggttcgattt tgtaccagtg atcccaaata ctcggttttc
     2281 taccatctac atttgctgcg ccttctgttt gtgggccgga cgccgcactt ccccaccaaa
     2341 aattctctgg aaatttataa gtcatttttc tacctccaac tattatttgc ttttattata
     2401 ccttatttat ttaaaagtat aaacttattt atttaaaagt tcgtttttta tttttatttc
     2461 ttacacgtat tgccaaaaat cggctaatcc gctacaataa taaagtcgta taagttcggt
     2521 aatatggacc gttcgtttct accaggcaac cgtaaaatgc caggctacga gctattgtaa
     2581 aatttaatag ggattttttt gctattttta tttattattc ccttttttac ctaggctctt
     2641 tccgttatgt gcgacaacat aaatagggag gcttttttta atggataaat ttttcaaact
     2701 acgcgagaac aagacgactg ttcgaacaga aatactcgcg gggctaacga ctttcttatc
     2761 gatggcttat gtacttttcg tcaacccatc tatgcttgca acaactggaa tggaattaaa
     2821 agctgttttt gtggcgacga ttcttgcttc tgttgtagga tcgcttgcaa tgggactaat
     2881 cgctaattac ccgattggac ttgcaccagg tatgggacta aatgcgtttt tcgcttatac
     2941 cgtttgtgcg cagtggggaa ttccttggca aacggcgctg gctggtgttc tcgtttctgg
     3001 cttagtgttc atttgtttaa ctatttctgg acttcgcgaa aaaatcgtta atgcaatccc
     3061 aacggaacta aaattcgcag tgggagcagg tattggtttt tttatcgcct ttttagggct
     3121 taaaaatgct ggaattattg tgccaaatga atctactatt gtagcgcttg gtgacttaca
     3181 ttctggccca gtgttactgg ctgttttcgg gattgttgtt actgttgctt acatgacaat
     3241 tggttggaaa ggtgcgattt tctttggaat ggcaacaacc gctgttgctg gaatgttgtt
     3301 tggactgatt gatgtgccga ctcaagttgt ttcatctgta ccaagtatgg agtcaacgtt
     3361 tggtcaagca attattcact taccagatat ttttacacca caaatgctca ttgttatttt
     3421 gacatttttc ttcattgatt tttttgatac tgccgggaca cttgttgcgg ttgcgactca
     3481 agctggattt gtaaaagata acaaaattcc gcgcgcaggt cgttcgctat tctcggattc
     3541 acttgcaaca gtatttggag cgattttcgg gacttcaaca acgacttctt atgtagaatc
     3601 tactgctggg gttgctgttg gtggtcggac aggtttaact gccgttgtta tcgcaatctg
     3661 tttctcactg tcactattct tctcgccgct tcttggcgta attacaagtg cggttacgac
     3721 tccagcgctt gtcattgttg ggattttaat gattggaaat gtcgctcata ttgattggac
     3781 taaattcgaa gtagctgttc cgtccttttt cgttatttta atgatggtac tgactttctc
     3841 tatcgctact ggtatcgcaa ttggtttcat tttctatcca atcaccatgg tacttaaagg
     3901 acgctacaaa gaagtgcatc cgattatgta cgtgatgatg gtactgttta tactgtactt
     3961 tatgttcgtc gtttagacag caaaaaaacc ggggattccg catcctcggt tttttcgttt
     4021 aatcataata cacaatcata tagtttttgc ctttttcctc gtcgtatcct tgtacaaaat
     4081 cagtttcttc cagctgttct aaatctttca caacaaccga aatatttttg ccaagcttaa
     4141 tcgttttacg tatttttttc gatagttttt cgcgcttttc ttcatctaat tggaatgttt
     4201 ctggaaaacg gacattgttt tctcgttcga acgtatccac cattgtattg aattcggtaa
     4261 tctcttccgg tttttcaatt gtcgtgcgag caaattcagc aatattcaac gtctcttctc
     4321 ctgctaaata ttccgatgtc gcttttacaa aattagattt atcaagcagt gattcctcgc
     4381 gttgtttaat ataatccgta caaacttcca caaaaccttc cgtgtaaaat ttctcatcgg
     4441 ttatcttatc aatactcaaa aacttatctt tccaataaac cgaatcgccg cggttaagcc
     4501 ggtctaaaat caacacttta tttcccgtgt catgatccac attgaaaacc aagcaacctt
     4561 tatctaaatc cgtcccggta atccctttat catagccaat ttggaattct ctgccattga
     4621 aatcattttt aagaaaaact tctttgtttt cgactttaaa aatcccgatt ccgttcgtga
     4681 aatcaccatc gacaacgcag ccctcaataa agaaaatcca aacatcgcca cttttaatat
     4741 tcgggtgggt tgtttcgcta tataaatgct ctaaaatctt cttggattca tccagaaact
     4801 cgtcctccgc gacaaacata ttcgcagcaa aagtacgaac ttcattaaaa tccaaatctg
     4861 tttcatgcgt aaattgataa tattcatctt tattaaatgg ctctaagaaa atcgaagcta
     4921 gtgtttgatt catttccgag ccaatgtcag cgagcacatt cgctgatact tctgttcctt
     4981 cttctctcgc tttatttcca gcaaaatgga ccacgagttt agtaattttt gcgtatgaaa
     5041 aatctggcat tcctttatca tcctaacttt tataaaatag gtatttcctg tatactaaat
     5101 ttattatgaa caaatggagg tacgtaatga ttccagcaga ttttgaagac cgtgtttata
     5161 cagtcgtgcg ccaaataccg cgcggtaaag tgactacata tggccaaatc gcctatatga
     5221 ttggctttcc taaaaacgcc agactcgtag gtgctacgct aaaacattcg aagcgtgacc
     5281 aaattacgcc ttgccatcgt gtcatcaatg cagctggtcg acttgtcccc ggttgggaag
     5341 agcaacgcga actcctttta tcagaaggtg tgacatttaa agagaatgga cacgtcaaaa
     5401 tgaaagatca tttttggcaa taagtgctat atccacgtcc tatatcttga acaccgtgcg
     5461 agtccgaccc atagacaaac ggaatctgta actcgctagc taatgtcact attttctttg
     5521 gtgggtatgt ctctccgcaa aggggcttaa atagtcccgc cgtattaaaa tcaagttcat
     5581 agtctcgttt tttcactaaa gcaagaatca cccgaaattt ctccattact tcctcagaaa
     5641 aatcgcttgt atcctcccca aagaattgct gaaacttctg acacaatgaa atatgcccca
     5701 ttctccgcgg tttaaaaagt cctaaatccg cttcaattga ctgttttaca ccttctaaat
     5761 aagcaagttg cgcttgttca aacccgccat aaaattgtac aattccttca ttataatcct
     5821 ccgctgaaaa atcaatcgaa cgaaaaccac cttgcccctc taaaaaatgc agcgacaaca
     5881 caccatcatc cgtttgtggt ccatactcat tcaaaaaatc ccgcgtaaaa tcctcataac
     5941 caatcaaata atccacttca aacccgatat gtattaataa atcgctcgca tattttttct
     6001 ttatatggtt cattttctta aaataataag ggagatcact cattgccata ctagccgttg
     6061 tcacagcttc cttgtcccca gctgtatttt tcataaattc actcgaaagt ggcgcgtgct
     6121 ctactataga atactcatca aaatccagtt caatcgcttt taaaaccatt tcttccacgt
     6181 catcatgcgt accatgtgga caaaattctg tgtgcgtatg cccgtctctt ttcatattca
     6241 accctctttc aaaattcttt tccctaagtg ctctaaatgg tacactaatt ataccataag
     6301 caactatttt tctattcatt atttacaaaa acactttaac gtgctaatat gctaataaac
     6361 taaaatatcg taaaggagct aaccagatga acttaaataa gaacttacca accggaacac
     6421 gtgataaact ctttcgtgaa gcacaagctg catacaaaat tgagcaacaa gtgaatcatt
     6481 attttgaaaa acgtggattt aaacgtattg aaacacctgt tatcgagttt gaagatgtct
     6541 tttcttctga acatcaagcc gatgcgaagt tataccgttt ctttgacgaa aaaggacgtt
     6601 tgacagttct acgtccggac atgacccttc caattggtcg agttgtgagt acaactggtg
     6661 tgatgctccc tctaaaactt tcttatagtg gaaaaatttt tcgtgccaat gaagattttg
     6721 gtggcgaaca aaacgaacaa acgcaagctg gaattgaaat cattggctat ccttcgatta
     6781 aagcagagat tgaatgtatt ttaagtggaa tcggggtttt aaatgctcta gaaattccga
     6841 attttcaaat tgaactcgga catgcagcaa tttatcgtcg tgttatccaa cttttaaatc
     6901 tctccgaaac agctgaaatt gattttcgcc aactaattca aaataaaagc ttaactggta
     6961 ttaaacgatt tgttgccaat aatccaagta cacttgacga ttttattcta gccataccaa
     7021 gattatttgg cccagcgaca gctattttaa accaagcaaa aagtttaacg actgacaaag
     7081 gaattttaac ggcactgcgc gaaatggaaa ccattgtgga agctgtttct tacacagcag
     7141 atattagtgt cgatttagga ctcgtacaag attttcatta ttatacaggt ataattttta
     7201 gaggatacgc tgaccttgct gctgataatt ttttaagcgg cggccgttac gatcacctac
     7261 tagaacaatt caccagctct tcctccccag cagttggttt ggctcttaat ctcgactccc
     7321 tcacaactct acaaaaccgc gctggcatca tcaaaaaaca aacgccaaca actcttttga
     7381 tccactacga ccttgaagca ctcccacaag cagaaaaatt catgcaagaa acaccaaata
     7441 gtgaattaag tttttttgaa acagcatcaa acgccatctc ttttgcaaaa aaatggcata
     7501 ttcccgaagt cgttcacgtc tcgagccaag gcatccaaac tattttccaa agggaggtgg
     7561 actgatgaaa gctctaaaaa ttgctctaac gaaaggtcga ctggagaaag acgcagtggc
     7621 acttttggaa aaagctggga ttgactgttc ttctatgaca gataaaaagc gtaaactaat
     7681 ttttcatagt agcactcaac caatctcttt tattttagta aaagcggtcg atgtcatgac
     7741 ttacgtaaag cacggggttg cggatattgg catcgttggt aaagacgttt taatggaagc
     7801 atctaaatcc cattatgaaa tgctcgacct tgaaatcggc aaatgccagt tttgccttgc
     7861 ttctacacct gactttgacc cgagcagtta tcgacgaaaa atcatcgcaa ccaagtatcc
     7921 aactgttgct tccaaatttt tccgtgaaaa aggcgaagat gtagaaatta tcaaaatcga
     7981 aggatccgtc gagattgctc cagtgcttgg tcttgctgat gccatcatcg atatcgtcga
     8041 aactggctcc actttaaaag aaaacggctt acttatttat gaaaaaatgt atccaatctc
     8101 cgcccgtctg attgtcaata aagcttcctt aaaacagaac aaaacgcaaa ttttccaatt
     8161 aatcgaccaa ttagaacaag tgataaagga ggagcgcgct gaatgaaaat tttaaccgga
     8221 acagtaaatg agctattaaa cgagctcaaa atagaaactg atacgaacac ttccatccag
     8281 gtggaaaccg aagtaaaaac gattatcgaa aaagtcaaaa cagctggcga ccaagcccta
     8341 tttgacttca catccaagtt tgacggcgta gggctcaccg aactccgcgt tccagccgct
     8401 gacatccaag ctgcaagcgt aaaaatcgaa cctgccttct tagacgcgct ccaacaagca
     8461 aaagtaaata tcgaaagttt ccacagcaag caaaaacaac atgctttcct tgatagtgaa
     8521 aaagacggcg tcattcgagg gcaattaatt cgtccactag aaaccgtcgg cgtttacgtt
     8581 cccggtggca cagcagccta tccttcatcg gttttaatga atgtgttgcc agccaaaatt
     8641 gccggagtaa agcgaatcgt aatgattacc cctcccggtg aaaacggtat taatccttac
     8701 gttctagcct cagctcaact agctggtgtg gacgaaattt accaagttgg cggtgcacac
     8761 ggaatcgccg ctctagctca cggaacagaa tctatcccta aagtagataa aatcgtcggt
     8821 cctggaaata tctatgtcgc cactgccaaa cgtgaagtat tcggcttagt tgatattgac
     8881 atgatagccg gtccatccga aatcgtcgtg ctcgcagatg aaaacgccaa tcctgctttt
     8941 atcgcagccg acttactctc ccaagcagag cacgatattt tagcccgtgc tatcttaatc
     9001 acaactagta aaaaaatcgc cgaggaaaca caaaatgaaa ttgacaaaca gctagaaaat
     9061 ctaccgcgaa aagcgattgc tcagaaatct atcgaaacac gaggaaaaat cattatcgca
     9121 gcaaccacac aagaaatgtt cgatatcatg aacgaaatcg ccccagaaca cttagaagta
     9181 caacttgaaa atccgatgaa ctatctctat caaattaaaa acgctggctc cattttctta
     9241 gggagttatg catcggaacc tcttggcgac tattttgctg gcccaaatca cgtcttacct
     9301 acaagtggta ccgcaaaatt cttctctcct cttggtgttg aagattttac caaacgttcc
     9361 gcctttattt cttatacaaa agaagcactc gcaaaggaaa aagatgctat cgttttactt
     9421 gctaaaaaag aaggtctaga cgcccatgcc aaagccattc aaattcgttt tgaggaggaa
     9481 aactaaatga gaacagcgac taaaacacgc attactgctg aaacttctat tgagctttcc
     9541 attaacctag attcccaagc agaatcaatt atttctactg gagtcggatt tttggatcac
     9601 atgctcaccc ttttcgccaa acacagccga ataactttaa atgtaaaagc agatggtgat
     9661 acatatatcg atgcgcatca caccgtagaa gacatcggca tcacactcgg gctttgttta
     9721 aaagaagcac ttgctgataa agcaagcatt aatcgttacg gctccgctta tgtaccgatg
     9781 gacgaatcac ttggcttttg cgcactagat ttaagtggtc gttcttattt agtttttgac
     9841 gccgaattaa caaaccctaa actcggtgat tttgacacag aactagtgga agaatttttc
     9901 caagcagttg cctttaacac ggaaatgaac cttcatctcc gcgttcttta tggcaaaaac
     9961 acgcatcata aaatcgaagc actttttaaa gcattcggtc gtgctcttcg tgaagcaatc
    10021 acgattaacc cagaaatcaa aggtgtaaat tcaactaaag gggtcctgta aatgattgtt
    10081 attattgact acgatacagg aaatacgaaa agcatcagta aagcccttga ttttatcggg
    10141 ttacaaaaca aaatttctag tgataaaaca gaaatcgctc aagctgatgg tgttattttg
    10201 cccggagttg gtgcttatcc agaagccatg caagaactca ctcgacgcgg attagataaa
    10261 acattaaaag aaattgctac cgctggtaaa ccaattcttg gcgtttgtct tggtatgcaa
    10321 ctattactcg aatcaagtaa cgaacatagc tatactaaag ggctcggcct cattcccggt
    10381 catgtcgaaa tgctaccaga cgaatccgaa tttgccgttc cgcacatggg ctggaatcaa
    10441 ttacaaatca aacgcaccac cccgcttaca caaaacattg ctggagaata tgtctattac
    10501 gttcattctt actatgccaa ctgtccagaa gcttacatta tcgcaacaag tggttattct
    10561 attgatatcc ctggcatgat aaataacggc aatatttacg gagcacagtt ccatcctgaa
    10621 aaaagcggcc aaatcggtct tgaaatttta aaaggtttta aggaggtcat tcgttcatgc
    10681 aaatcttccc agcaatagac ttaaaaaatg gacagtgcgt ccgtctcttc caaggcgact
    10741 tctctaaaaa aacagttgtc aatgaagacc caattgccca agcaaaagca tttgctacag
    10801 acggcgcaac ctatttgcac atcgtcgacc tagacggtgc attagaagga cgtcctatca
    10861 atctagaaat tattcaaagg atgaaaaaag cagctaaaat ccctgttcaa gttggtggag
    10921 gaattcgtag catggcgcaa gtggattatt atcttgaatc cggcatcgac cgcgtgatta
    10981 tcggttctgc cgctctaaca gatccagatt tcctacgtgc ggcagtccaa aaatacggag
    11041 ctaaaattgt agcaggtatc gatgccaaaa acggttttgt cgcaacaaga ggttggctcg
    11101 atgtcagtca ggtaagctat ttagatttgg ctaaacgaat ggaaaaagtg ggtgttgaga
    11161 caatcattta cactgatatt agccgtgatg gcacgctaac tggacctaat ttagaacaaa
    11221 tggcaaatct caaagaacac gttaaagtta gtttaattgc ttctggcgga gtgagcagtc
    11281 gtgcagattt ggaagcactc gcccaactcg gcttatatgg agcaattgcc ggaaaagccc
    11341 tttataatca tgatatttcc atgtcagata ttgtagaggt ggaacaaatt gcttactaaa
    11401 agaatcatcc catgtcttga tgtcacagca ggtcgagtcg tcaaaggtgt taattttgtt
    11461 tccttaacag atgtcgggga ccctgtcgaa attgctaaag cttataatga agctggtgcc
    11521 gatgagctcg tctttcttga tatcacggca actgtcgaac tccgtcaaac catgatagat
    11581 gttgtggaac gaactgctga gcaagttttt attccactca cagttggtgg gggtatcagt
    11641 agtgtttctg acatgaaaga acttcttcaa gccggagccg acaagatttc gcttaattcc
    11701 gccgccatca aacgaccaga actcatccaa gaaggagcag caaaattcgg aaaccaatgt
    11761 atcgttgtcg caattgatgc aaaatggaat ggtacaaatt ggagcgtctt cacgagaggc
    11821 ggtcgaaatg ataccggact tgatgctatt gaatgggcta aaaaagctgt acaacttggt
    11881 gctggtgaaa tcctactaac aagtatggac ggcgatggaa ccaaaaacgg ttacgatatt
    11941 ccgctcacaa aagcaatttc agcagcagtt tccgtcccag tcattgcttc aggcggttgc
    12001 gggaatgccg cacatatggc cgaggttttt gaaaaaacaa aggcaaccgc cgctctcgct
    12061 gcaagcattt tccactacgg tgaactaagc atcaaaaatg tcaaaacaac cttactcgaa
    12121 aaaggagtga atattcgtcc atgacttctg tagatttttc taaaggtctt gtcccaacta
    12181 ttatcctaga cgatcaaaat ggcgacgttt taatgctcgc ttatatgaac gaagaaagtt
    12241 atcaaaaaac ccttgaaact ggctatactt ggtttttttc gcgctccaga aacgaacttt
    12301 ggaataaagg cgcgacaagc ggacatactc aaaaagtaaa acaaatctgg accgattgtg
    12361 ataacgacac attacttatc cgcgtaaccc aaatcggtcc agcctgccac accggcaaaa
    12421 aaagctgctt tttcaatctt ataaaggagg atttttaaat gttaaatgac ctatatgaag
    12481 aaattaaact gcgtaaaact caaccaagag aaggctccta taccaactat ttgttcgata
    12541 aaggccttga taaaattctc aaaaaggttg gtgaagaagc aaccgaagtc gttattgctg
    12601 ccaaaaataa cgagcaagaa ttaatcgctg aagtatccga tttaacttat cacttgctcg
    12661 ttctcttagc cgagcaaaat attccattat caaaaatcca agcagagctt caaaatcgtg
    12721 aaggaaagct aagcaccact cgcgaccgta aagaaattaa cgatttataa aaacatgaca
    12781 ttttcgtaag cttagagatc attattgtaa gaaaaagcgc atgattttta aatacatttt
    12841 ttatatactt gtttacgtgg agagctttca ttttcccaag agaaagcaaa taatgttaga
    12901 gcaataattc tagtatccga attagtctta tcccttggct cgctttaata ttatttctcc
    12961 ctaatactcc cttaaccgca tccccctggt gcggttattt ttttattaca tcttcaattt
    13021 ctacgcatta aaacctaagc aaacgttctc attaactaca ttttaaaaaa tttcagaaaa
    13081 attggttttt atgcttgaaa atattctcaa caatgtgtaa actaacaaca taggtaagaa
    13141 aagttgacct acttaatgta cacaagccga tgttcttctt gctttataac atcacgtgta
    13201 tttacattaa gttttctact tttccttata gtcaaaatat ttaaacaagg agcgattata
    13261 gtatggcaca aacatccact attcaaaatg acacaaaggc agccgaagaa tacgcagctc
    13321 gcgtgtttga aacaattaaa ctacggaatc ctggcgaaac ggaattccac caagcagttg
    13381 aagaattctt aaactctgtt atcccagccc ttgcaaaaga acctaaatac gaagcaaatg
    13441 gtattttaga acagttaaca gaacccgaac gccttatcag tttccgagtt ccatgggtgg
    13501 atgattctgg cacagtacat gtaaatcgcg gttatcgtgt ccaattcaat agcgcaattg
    13561 gtccatataa aggcggcctt cgtttccacc cttccgttac tggaagcatc gttaaattcc
    13621 tcggttttga acagatcttc aaaaactccc taactggctt accaatcggt ggcggtaaag
    13681 gtggctctga ctttgatcca aaaggaaaat cagactcaga agtaatgcgt ttctgccaaa
    13741 gttttatgac tgaactacaa aaacatatcg gtccagatac agatgttcct gctggtgata
    13801 ttggtgttgg tggtcgtgaa attggctact tattcggtca atacaaacgt cttcgcggtg
    13861 cgtatgatgc cggtacaatt acaggtaaag gcctttctta cggcggaagt ttagctcgta
    13921 cagaagctac aggatacggt cttgtttatt tcaccgttga aatgttagaa gcagccggtg
    13981 aaaccattcg cggcaaaaaa atcgtcgttt ctggttcagg taacgttgcg atttatgcaa
    14041 tcgaaaaagc acacgaattg ggcgctaaag tagttgcatg tagcgattct gctggttttg
    14101 tttatgacaa agaaggtatc aaagttgaaa cagtaaaaca attaaaagaa gtagaacgta
    14161 aacgtattag cgaatacaca accattcatc catctgcaga atattacgca ggcggcgacg
    14221 tatggtccgt tccatgtgat atcgcactac catgtgcaac tcaaaatgaa atcaacgctg
    14281 accaagctcg tgcccttgta aaaaatggtg ttatcgctgt tgcagaaggc gcaaacatgc
    14341 cttctactct tgatgcagtg gatatttacc acgaaaataa agttctattc ggtcctgcaa
    14401 aagctgccaa tgctggtggt gttgccgtat cagcacttga aatggcacaa aacagcacac
    14461 gtatgagctg gactttccaa acagtcgacg aacatttaca aaacatcatg aaagatattt
    14521 ataaaaattc aagcaatgct gcaagcgagt acggcgcacc tggtaaccta gttatcggcg
    14581 caaatatcgc cggattcctc aaagtagcag acacaatgat ttctcaaggt attatttaat
    14641 tcaaaaagcc cttctttcta tccgaaagaa gggctttttt gttatctcat taattttcgt
    14701 aaaataaagg aaagtccgaa ccatagaatc acactaataa aaatcgtcac aatccaacca
    14761 aacgtattat gttctaaagg aagtggcatg ttcattccaa agaagcccgt aataatagta
    14821 ggaaccgtca ataaaatgga tagcgccgtt aaaattttca tcgtatcatt caaattattg
    14881 ttcaaaatat tattatatgt acctgacaat tgctgtaaga tttgagagct cagccccgtc
    14941 atttccacca gttgcctcgc ttcaattaaa gcatcttcaa attgttcctt ttccacttca
    15001 ttaagctcac gataaatcag atgggctttc atttgctcca gaagcgccgc attttgctta
    15061 gatgccgaaa caaaataaac aatcccagtt tccaaatcag ataatgacaa taaatttttc
    15121 ttcgtcgttt taattttcaa tttgtcatta atcgttcttc tatccgtatc catttcttcc
    15181 acatatggaa aaaaagcatc cataataaaa tacaaactac taaataaaaa ttgaaaaata
    15241 gttacgtcat ctgattcttt taaat
//
LOCUS       DASDYK010000060        15080 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.060, whole genome shotgun sequence.
ACCESSION   DASDYK010000060 DASDYK010000000
VERSION     DASDYK010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15080)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15080)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15080
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.060"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            28..501
                     /locus_tag="U0308_001816"
     CDS             28..501
                     /locus_tag="U0308_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEM2316779.1"
                     /translation="MKKILLLLTSITVILTLGACGDNKKETEEKANQTEKESASFLTT
                     ISTKDFKQKMADKTTGFVYVGRPTCEDCQAFQPMLKKELKKRQPDQKMAYYNTDKASE
                     KSRDDMIALLEKMDIDSVPTMVYLKDGKVASTYAATDEPAKLTNWMNKVSGEVSE"
     gene            668..1501
                     /gene="panB"
                     /locus_tag="U0308_001817"
     CDS             668..1501
                     /gene="panB"
                     /locus_tag="U0308_001817"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEM2316780.1"
                     /translation="MKRPVDFFAMKENGEKITMITAYDYPSAKNVEQAEADMILVGDS
                     LGMVVLGYDSTVPVTMDDMIHHTKAVKRGAPDTFVVTDMPFMTYHGSVDETIQNARKI
                     IQESGAHAVKLEGAGEVVNKIARLTEAGAPVVAHLGLTPQSVGLTGSYKVRAKSAQEA
                     QELMDNALAVEAAGAIALVLEAIPRQLAEKVSKALSIPTIGIGAGVETDGQVLVYHDI
                     IGYGISRRAKFVKAYADIDERIEPALASYVKEVKAATFPEVKHSFTMAEEDLKGLYGR
                     E"
     gene            1505..2362
                     /locus_tag="U0308_001818"
     CDS             1505..2362
                     /locus_tag="U0308_001818"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEM2316781.1"
                     /translation="MLIIRNKQDLKEAILEQKKANKTIGYVPTMGFLHEGHMTLVSHA
                     RKETDFVVMSVFVNPTQFGPNEDFDAYPRDEAHDAKLAEEGGVDILFVPTVEEIYPTE
                     LATKLHVIKRVSVLDGADREGHFDGVVTVLTKLFHLVNPDNAYFGQKDAQQVAVVSGL
                     VEDYFFPINLRIIATVREADGLAKSSRNVYLTEKERKEAPVIHEALQLGRELIESGET
                     NEAKIVQVMTDKINEQPSHENIAYLALYSYPEFTPVTDWTKGIIIAAAVKYSKARLID
                     NELINVKRR"
     gene            2366..2749
                     /locus_tag="U0308_001819"
     CDS             2366..2749
                     /locus_tag="U0308_001819"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEM2316782.1"
                     /translation="MFRTMMNGKIHRATVTEANLNYVGSITIDSAILEAVDMLPNEKV
                     QIVNNNNGARIETYIIPGEPGSGVICLNGAAARHVQVGDVVIIMSYGMFTTEEAKTHE
                     PKIVVLDEKNHIEMILPEEKAHTTL"
     gene            2846..5632
                     /gene="dinG"
                     /locus_tag="U0308_001820"
     CDS             2846..5632
                     /gene="dinG"
                     /locus_tag="U0308_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HEM2316783.1"
                     /translation="MKQKRYIVVDLETTGNQASREDRIIQFAACFVESGKRLETYTTF
                     LNPEKPIPAFIQELTGISPKDVKNAPLFEDVAPIIANLLEDTIFVAHNVSFDWTFLER
                     EMTRAGISLGKMKKLDTVELARIMYPGIDSYKLQDLSDEFNLGHDKPHRADSDAEVTA
                     DLLLLLLEKLENLPLPVIRQMTTISGSLKSYLPELLFEIEMRKERENKPLDPAFVEHR
                     GLVIRKKEVEKPTYSRADLLEFPETDEAKMALFKKAGAPLYARSGQFEMMNLVFQAMK
                     SGKHALIEAGTGIGKSLGYFLPAIYQAKQAELPVVISTYTNLLQAQLFEKDVPLLTKL
                     TGFKVKASLLKGRDHYLNLFKFEQLLQEVDTQYDVVVTKLKLLVWLTETTTGDIDEVN
                     LSSGGELFWNRMKHTGWFLSEKHDPWLAHDFYKFNIKQAKNADLVIVNHALLLNDHFS
                     GRETLPKYAFAVIDEAHHFADSARMQGSFVLSYRKIKYFLNQLGSLEKYSLLTRLAMA
                     FPEADSLYDLDIAAMKLSDAVEEFFGLLKMQLNFARKNLQEVVLVENSEKDAWNDKVY
                     YAAEKVLHLLKESEKNMETLLEQGKQEENELGEAESAFLEEMYAFLLDWKNMVKQLEQ
                     MLHKKSPILTIYLQADKNHSISSIRLKAVLMEVEPTLGKEFFAKKESVIMTSATLTVK
                     GKFDYLRKSLGLEEEQIMEKRIPSPFDYKENARVMIPDDMPPIKDTPIERYTLELAKY
                     IRHIAVKTNGRMLVLFTASDMLQKTYYHMKNEKSLEEYVLLAQGVSAGSAARLTKQFQ
                     MFDKSILLGTTSFWEGIDIPGEDLSCLVIVRLPFAPMDDPYTKAQISLRKERGENAFQ
                     TYSLPEAVLRFKQGFGRLIRRESDRGIVFVFDNRVDTTKFGKAFLESIPSAPILKGKQ
                     ADLLEEVSEFFKEG"
     gene            5677..6261
                     /locus_tag="U0308_001821"
     CDS             5677..6261
                     /locus_tag="U0308_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5590 domain-containing protein"
                     /protein_id="HEM2316784.1"
                     /translation="MYLCENENAYRRRNSGNLEIEMSEIILRNRKPKRKIGKWIAIIL
                     GIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLT
                     GKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARDKVTKEKNPKKILHVNLGMEKE
                     TPIWEVAYLDKNDKLNYFDINFETGEWYREIENL"
     gene            6284..7465
                     /locus_tag="U0308_001822"
     CDS             6284..7465
                     /locus_tag="U0308_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM2316785.1"
                     /translation="MDLPLSKRVKGVAPSPTLAITAKAKQMKQEGIDVIGLGAGEPDF
                     NTPQNIIDAAIESMNKGFTKYTPSSGIIELKQAIVDKLQKDQFLNYETNQIFVGTGAK
                     HVLYSAFQTILDPGDEVIIPVPYWVTYPEQVKLAGGIPVFVETGFDADFKISAANFEK
                     AITKKTKAIVLNSPNNPSGMCYTKEELIAIGEVAEKHQIYILSDEIYEKLYYGNKADL
                     VSIASLSDRLYDLTIVINGVSKAYSMTGWRIGYAAANKEIIAGMSKLADHLTSNPTAN
                     AQYAALEAYVGSQEVPEKMYKAFEERMERFYPELSSIPGFKPKKPDGAFYFFIEVKEA
                     AHKKGFQDVDAFVAALLEEAKVAVIPGSGFGMPDYIRLSYATNPDLFQEAINRIKSFM
                     K"
     gene            7479..8771
                     /gene="asnS"
                     /locus_tag="U0308_001823"
     CDS             7479..8771
                     /gene="asnS"
                     /locus_tag="U0308_001823"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HEM2316786.1"
                     /translation="MKITINQASEFVGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQ
                     GVVVKAEVGDDIFATAKALTQETSLYVTGTINEDTRSPFGYEMAVSGVEVISESHDYP
                     ITPKEHGTEFLMDHRHLWLRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGS
                     APEGTTELFHTKYFDEDAFLSQSGQLYMEAAAMAFGKVFSFGPTFRAEKSKTRRHLIE
                     FWMIEPEMAFYKLEDSLQVQENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPR
                     ITYTEAIERLHELGFDDIVWGDDFGAPHETAIADSFEKPVFITHYPKAIKPFYMPEDP
                     ENDQVVLCADMIAPEGYGEIIGGSERIHDLETLQARMEDFDLDQEAYSWYLDLARYGS
                     VPHSGFGLGLERTVAWISGTEHVRETIPFPRLLNRLYP"
     gene            8921..9640
                     /locus_tag="U0308_001824"
     CDS             8921..9640
                     /locus_tag="U0308_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain-containing protein"
                     /protein_id="HEM2316787.1"
                     /translation="MNPKILEKWMAEGQVTLPQVLVKNYATIGLNEVELVLLLQIQSF
                     AAEAEFFPSMEMLTNRTTLPLEETIKTMDSLLKKGVIAIEQSQDNSRMISEQYNLAPL
                     WGKLVALYENKEADSKHEKELEKQTSLYTLFEAEFGRPLSPMEAEMLSAWVEQDRTSP
                     DLIKEALKEAVISQKLNFRYIDRILLNWSKQGVKTIEDAKRVAEEFHQNGRTSQAINQ
                     TEVKKSAGSIPLYDWLEKRKG"
     gene            9651..10310
                     /gene="nth"
                     /locus_tag="U0308_001825"
     CDS             9651..10310
                     /gene="nth"
                     /locus_tag="U0308_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEM2316788.1"
                     /translation="MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCT
                     DVLVNRVTASLFEKYHSPEDYLAVPLEELMEDIRSIGLYRNKAKNIQGLSEKILIEFN
                     GEVPKTHAELESLPGVGRKTANVVLSVGFGIPAIAVDTHVERISKRLGICRWKDSVVE
                     VEETLKRKLPKELWSDAHHYMIFFGRYHCKARNPECPTCPLLYLCREGKKQAKVRGFD
                     G"
     gene            10303..10794
                     /locus_tag="U0308_001826"
     CDS             10303..10794
                     /locus_tag="U0308_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316789.1"
                     /translation="MAEFKYAVELTHPDFPAPDVILEEYDPESIYVSGLPFWQEQQFF
                     TKGGGVIPWKNETERACRKLAKHMTNLAESMEADLKVHKKPSPVTVRDALGIFLSILF
                     WSNHRPVQLDNLMDQIKTLETKPLNLDERLEYVLKRGNTYLGFRQLNELMLEQRKLIA
                     KRS"
     gene            complement(10837..13320)
                     /locus_tag="U0308_001827"
     CDS             complement(10837..13320)
                     /locus_tag="U0308_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEM2316790.1"
                     /translation="MADKPQTRSQYRNKQSGGSKKKSQKRGKRVVANIFKTIFFVGLF
                     LAFFGIAAGATVFYDYAKDAPKLTDSKLRDPLSSKLLDKDGKVFAEVGTERREYIEYK
                     DIPETLKNAILTTEDARFYEHDGIDPIRLGGAVIANLTDGFGAEGASTLSQQIIKMSY
                     LDYTNKTLARKAQEAWLALQLEEKYSKNDILEIYVNKVYMSDRVHGMQTASEHYFGKN
                     LKDLTLAQTALLAGMPQSPNNYNPYEHPEAAKKRRDQVLTNMYTHDKITKEEMTEAQK
                     TSITTGLRSKKDREDKIYKYDSYVTQVLSEIPKEYDVYRDGLTIHTALDRDAQEYTEK
                     MLNTNEIVNFTDDEMQAGIVLQDTKTGRVQAIGGGRKQKVTRGYNYATQVKRSVGSTM
                     KPIADYGPAFEYLDWSTAHILEDEPYTYSGGTPINNWDFAYKGPISVRQALYQSRNIP
                     ALKTLQAVGLDKSEEFVNKLGITYDEGQNVESNAIGANSSNPMQMAGAYAAFGNKGIY
                     NKPHTVTKIVLSDGQTEIDTEPQSTVAMKESTAYMVSDVLKDVLSIGTGTSAAVPGVP
                     AAGKTGTTNIPPEFTSKYYYPSGAARDSWFAGYTTNYSIAVWTGYDDKKKYVSASEQK
                     IAQRMFSKLMAHASAGKTTADFKMPSNVVSVPILKGSNPIARAAAGTASDKVSYELFL
                     SGTAPTKTASTPEDEKKKAEEAAKKKKAEEDKKKTDEEKKKEEEAKKKAEEEAKKKAE
                     EEAKNLTAPAGLRASYNAGSKQINVSWSAVDGATYEVTVNGSTTTVSSTSVSVSGGNP
                     GDTVSINVVAVKDGNRSPASSTTVKIPDS"
     gene            complement(13352..13957)
                     /gene="recU"
                     /locus_tag="U0308_001828"
     CDS             complement(13352..13957)
                     /gene="recU"
                     /locus_tag="U0308_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RecU"
                     /protein_id="HEM2316791.1"
                     /translation="MAIGYPNGKKYAASHEVLPQQKRKAPVTYGKRGMSLEDDLNDTI
                     AYYLTHEIAVIHKKPTPVQIVSVDYPKRSSAKIKEAYFKTPSTTDYNGVYKGKYVDFE
                     AKETQNTTSFPLSNFHDHQMTHMANVLKQDGIVFVIIAFQKLGETHFIPFEKFYPFWE
                     RMQSGGRKSVTIAEIQDVSDQIPYGLNPRLDFLQSIDKLYF"
     gene            14204..14569
                     /locus_tag="U0308_001829"
     CDS             14204..14569
                     /locus_tag="U0308_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YppE family protein"
                     /protein_id="HEM2316792.1"
                     /translation="MELLNRTEKLLLQNEKNWELYLSNREEAKPFDFYKDMKPFVDEA
                     KNSADAFLELAIPWVNKERPPYLGELQLRQACDNVQMTAVSAFNGKSFYKHFLDHYQS
                     TKYTLTRVRDFLKRKEELM"
     gene            14566..>15080
                     /locus_tag="U0308_001830"
     CDS             14566..>15080
                     /locus_tag="U0308_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1273 domain-containing protein"
                     /protein_id="HEM2316793.1"
                     /translation="MKSIAVTGYKNFELGIFKKDADEAVYIKETIKRHLLPLVEDGLE
                     WVIISGQLGIELWAGDVVAELKADYPIKLAILEPFEKQSANWNEANQLWASEVLEKAD
                     YHAFITKRPYESPAQFAARDGFIIDNTDGALLVYDLEKEGSPKFFYDRAIQAKEQSNY
                     YIDCIDFYALQ"
BASE COUNT         4931 a         2624 c         3112 g         4413 t
ORIGIN      
        1 tacaataaat gcgaaggagc tgtttagatg aaaaaaatac tattactatt aacatcaatt
       61 accgtaatcc ttacacttgg agcatgcggc gataataaaa aagaaacgga agagaaagca
      121 aatcaaacag aaaaagaaag cgcctctttt ctaacaacca tttccaccaa agatttcaag
      181 caaaaaatgg ccgataaaac aactggcttt gtttacgttg ggcgtccgac ctgtgaagat
      241 tgccaagcat ttcaacctat gttaaagaaa gaacttaaaa aaagacaacc agaccaaaaa
      301 atggcttatt ataacacaga taaagcctcc gaaaagagtc gcgatgatat gattgctctt
      361 ttagaaaaaa tggacatcga ttctgtccca acgatggttt atttaaaaga tggaaaagta
      421 gcgtctacct atgcagcaac ggatgaaccg gcgaaattaa cgaattggat gaataaagta
      481 agtggagagg tttcagagta ggcctctctt caatttacat actttaagta agcatctatt
      541 tatgttatta tacatatggt agcaatgaat ggatgatacc tttaccggat catactaatg
      601 ctactaaaaa aatatgtttt ttgccttgat taaagtaatt taacagggac gaaaaggagc
      661 taagaaaatg aaaagaccag tagatttttt tgctatgaag gaaaacggag agaaaataac
      721 gatgataacc gcgtatgact atccttctgc taagaatgta gaacaagcag aagctgatat
      781 gattttagtc ggcgattcac ttggaatggt agtattaggc tacgattcaa ctgtaccagt
      841 tacgatggat gatatgattc atcatacaaa agccgtgaag cgcggggcac cagatacatt
      901 tgttgttaca gacatgccgt ttatgacgta tcatggttca gtggatgaaa ctatccaaaa
      961 tgcacggaag attatccaag aaagtggcgc tcatgctgta aaattagaag gagcaggaga
     1021 agtcgttaac aaaattgctc gcctaacaga agcaggtgct ccagttgtcg cgcatcttgg
     1081 cttaaccccg caaagtgttg gcttaactgg aagctataaa gtacgtgcta aatctgccca
     1141 agaagcacaa gagctaatgg ataatgcgtt agctgtagaa gctgctggag cgattgcact
     1201 cgtacttgaa gcaattccac gtcaactcgc tgaaaaagta agtaaagcac tttctatccc
     1261 tacaattggt attggagcag gcgtagaaac agatggacaa gtactcgttt atcacgatat
     1321 tatcggttat ggaatcagtc gtcgcgccaa atttgtaaaa gcgtatgcgg acattgatga
     1381 aagaatcgaa ccagcactag caagctacgt aaaagaagta aaagcagcga cgtttccaga
     1441 agtgaaacat agctttacca tggctgaaga agacttaaaa ggcctttatg gaagggaata
     1501 gcaaatgtta attattcgaa ataaacaaga ccttaaagaa gctattttag agcaaaaaaa
     1561 agcgaataaa acaattggtt acgttccgac gatgggcttt ttacatgaag gacatatgac
     1621 acttgtcagc catgcgagaa aagaaacaga ttttgtcgtt atgagtgttt ttgttaatcc
     1681 aacccagttc ggtccgaacg aagactttga tgcttatcct cgagatgaag cgcacgatgc
     1741 aaagctcgca gaagaaggcg gcgtggatat tttatttgta cctacagtcg aagaaatcta
     1801 tccaaccgaa ctagcaacca aactacatgt catcaaacga gtttctgtac ttgatggtgc
     1861 tgatcgtgaa ggtcattttg acggagtagt aacggtttta acgaagctat ttcatttagt
     1921 gaacccagat aacgcctatt tcggtcaaaa agatgctcaa caagtggccg ttgtttcagg
     1981 tctagtagaa gactactttt tccctataaa tttacgaatc attgcgactg ttagagaagc
     2041 agatggactt gccaaaagtt cacgaaatgt ctatttaaca gaaaaagaac gaaaagaagc
     2101 accggtgatt catgaagctt tacaactagg gcgagaactt attgaatctg gggaaacaaa
     2161 tgaggctaaa atagtccaag tcatgacaga taaaataaat gagcaaccat cccatgagaa
     2221 cattgcttac ttagcgctct attcctatcc tgaatttaca ccagtaacag actggaccaa
     2281 aggaataatc attgcagcgg cagtaaaata ttcgaaagct cgtttaattg ataatgaatt
     2341 aataaatgtg aagaggcggt aaaaaatgtt tagaacaatg atgaatggca aaattcaccg
     2401 agcgactgta acagaagcca atctaaatta tgttggaagt attacgattg attctgctat
     2461 tttagaagca gtggatatgc ttccaaacga aaaagttcaa attgtaaata acaataacgg
     2521 tgctagaatt gaaacctata ttatcccagg tgagccagga agtggtgtga tttgtctaaa
     2581 cggagctgca gctagacacg tccaagttgg cgacgtagta attattatga gttacggaat
     2641 gtttactacc gaagaagcga aaacacatga acccaaaata gttgttttag atgaaaaaaa
     2701 tcatattgaa atgattcttc cagaagaaaa agcgcatacg actttataat cagttcgggg
     2761 agcttgagtg gatttctgct caagctactc gtttgtttgc atcgttattt ttgaataaaa
     2821 gcagtgaagg aaagaggtgg agcagatgaa acagaaacgc tatatagtcg tcgatttaga
     2881 aacaacagga aatcaagctt cacgagagga ccggattatc cagttcgctg cttgctttgt
     2941 tgaatcagga aaacgtctgg aaacatacac gacattttta aatccagaaa aaccgattcc
     3001 tgcgtttatt caagaattaa cgggaatctc cccaaaagac gttaaaaatg ctccactgtt
     3061 tgaagatgtc gcaccgatta tcgcgaattt actagaagat actatttttg tggcacataa
     3121 tgtgtcattt gactggacat ttttagaacg agaaatgacg cgtgcaggaa tttctcttgg
     3181 caaaatgaaa aaactcgata ctgtggaatt agctagaatt atgtatccgg gcatcgatag
     3241 ttataaacta caagacttgt ccgatgaatt taatcttggg cacgataaac cgcaccgtgc
     3301 ggatagtgat gcggaagtga cagcagattt actactcctt ctcttagaaa agctagaaaa
     3361 tttaccacta cctgtcattc gtcaaatgac aacgatttct ggcagtctaa aaagctattt
     3421 accagagctc ttatttgaaa ttgaaatgcg aaaagagcga gaaaacaagc cacttgatcc
     3481 agcattcgta gaacatcgtg gactagttat tcgcaaaaaa gaagtcgaaa agcccaccta
     3541 tagtagagca gatttacttg aatttcctga aacagacgaa gctaaaatgg cactattcaa
     3601 aaaagctgga gcgccacttt atgcaagaag tggtcaattt gaaatgatga atttggtttt
     3661 ccaagcgatg aaatcaggaa aacatgcctt gattgaagcg ggaacaggga ttgggaaatc
     3721 gttaggttac tttttaccag ctatttacca agcgaaacaa gctgaattac cggtagttat
     3781 tagtacatac accaacttgc ttcaagctca attgtttgaa aaagatgtac cactcttaac
     3841 gaaattaaca ggattcaaag tgaaagctag cttactaaaa gggcgcgatc attatttgaa
     3901 tttgtttaaa tttgagcagt tacttcaaga agtcgatacg caatatgatg tagttgtgac
     3961 gaagcttaaa ttgctcgtat ggctgacgga aacaacgact ggtgatattg atgaagtgaa
     4021 cctatctagc ggcggggagt tattctggaa tcggatgaag cacacaggct ggtttttatc
     4081 tgaaaaacat gatccttggc tcgcacacga tttctataaa ttcaacatca aacaagccaa
     4141 aaatgcagat ttagtcattg ttaatcacgc actactttta aatgaccatt tttcgggaag
     4201 agaaacattg cctaagtatg cttttgcagt aattgatgaa gcccatcatt ttgcggatag
     4261 tgctcgtatg caaggaagtt ttgttctgtc ttaccgaaaa ataaaatatt ttttgaatca
     4321 gctaggctct ttagaaaaat attcccttct cacaaggctt gcaatggctt tcccagaagc
     4381 agacagttta tatgatttag atattgcggc aatgaagtta agtgatgcgg tggaagagtt
     4441 tttcggtctt ctgaaaatgc agttaaactt cgcgcgtaaa aatttacaag aagttgtctt
     4501 agtagaaaac agcgaaaaag atgcttggaa tgacaaggtt tattacgctg ctgaaaaagt
     4561 attacatttg ctaaaagagt ccgaaaaaaa tatggaaaca ttgttagaac aggggaaaca
     4621 agaagaaaat gaactaggtg aggcagagag cgcctttttg gaagaaatgt atgctttttt
     4681 acttgattgg aagaatatgg taaaacaact ggagcaaatg ttgcataaga agtcgcctat
     4741 tttgaccatt tatttacaag cagacaaaaa tcattctatt tctagcattc gtctaaaagc
     4801 tgtcttgatg gaagtggagc cgacacttgg aaaagagttt tttgctaaaa aagaaagtgt
     4861 catcatgact tcggcaactt taaccgtaaa agggaagttt gattatttac ggaaaagtct
     4921 cggtctggaa gaagaacaaa ttatggaaaa acgcattcct tcaccgtttg attataaaga
     4981 aaatgcgcga gtgatgattc cagatgatat gcccccaatt aaagacacac caattgagcg
     5041 atataccttg gaacttgcga aatatattcg ccacatagca gtgaaaacga atggacggat
     5101 gctcgttctt ttcaccgctt ctgatatgtt acaaaaaacg tattatcata tgaaaaatga
     5161 aaaatcatta gaagagtatg tccttctagc gcaaggagtt tcagcgggaa gcgccgcacg
     5221 actgacaaaa caattccaaa tgtttgataa gtctattttg cttggtacga caagcttttg
     5281 ggaagggatt gatattccag gagaagactt gtcatgtcta gttattgtga gattaccatt
     5341 cgctccgatg gatgaccctt atacaaaagc acaaatatcc cttcgcaaag aacgcgggga
     5401 gaatgctttc caaacctatt ctctacctga agctgtactg cgatttaagc aaggttttgg
     5461 tcggttaatt agaagagaat ccgaccgcgg aatcgtattt gtttttgata atcgagtaga
     5521 tacgacaaaa tttggaaaag catttttaga gtcaatccca agcgcgccaa tcttgaaagg
     5581 caaacaggcg gatttattag aagaagtgag tgaattcttt aaggaaggtt aaatttttcc
     5641 tgatatgact tcaaatctta ggccgctatt gctataatgt atctatgcga aaatgaaaat
     5701 gcatatcgcc ggaggaattc cggtaattta gaaatagaaa tgagcgagat tattttgcga
     5761 aatagaaaac ctaagcgtaa gattggcaaa tggatagcga ttattctcgg cataattatt
     5821 gtgcttgtcg tagcagcttt tctgtacttt agatatgcag aaaaaccagt aaccaatgca
     5881 gaaacagaag ccttagaccg aataagtggc caagttgatt taaaaacaac agatcaattt
     5941 tatctttata atgggccaaa agaagtgtat tacgtattaa ctggtaagaa cagtaagaat
     6001 aagaatatca ttgtttgggt tccaaagaaa aaatccgaca aagtatatgt taaattcgca
     6061 tctgatggga ttacagaaca acaagcacgc gataaagtca caaaagaaaa gaatccaaag
     6121 aaaattttac atgtgaattt aggaatggaa aaagaaacgc ctatttggga agttgcctac
     6181 ttagataaga atgacaagct aaactacttt gacattaact ttgaaacagg tgaatggtac
     6241 agagagattg aaaacttgta actaaattgg aggagggaat aaaatggact taccgttatc
     6301 aaaacgtgtc aaaggagtgg ccccgtcgcc aacacttgcg attacggcta aagcaaaaca
     6361 aatgaaacaa gaaggaattg atgttatcgg cttaggtgct ggggaaccag atttcaatac
     6421 cccgcagaat attatcgatg cagcaattga gtccatgaac aaaggattca ccaaatatac
     6481 tccttctagt ggaatcatcg agctaaaaca agcgattgtt gataagctcc aaaaagatca
     6541 gttcttaaac tacgaaacga accagatttt cgtaggtact ggtgctaaac atgtactcta
     6601 ctctgcgttt caaacgattt tagatccagg cgatgaagtc attattccag ttccatattg
     6661 ggtaacttat cccgaacaag tcaaattagc aggtggtatt cctgtttttg tagaaactgg
     6721 ttttgacgcg gatttcaaaa tttcagcagc aaattttgaa aaagctatca cgaaaaaaac
     6781 aaaagcaatc gttttaaatt cacccaataa cccttctggt atgtgctata cgaaagagga
     6841 gcttattgct attggtgaag ttgctgaaaa acatcagatt tacattttat ctgatgaaat
     6901 atacgaaaaa ttatactatg gtaacaaagc tgatttagtc tctatcgcga gtttgagtga
     6961 ccgtttgtat gatttaacta ttgttattaa tggtgtatct aaagcatatt caatgacggg
     7021 ctggcgaatt ggttacgcag ctgcaaataa agaaatcatt gctggaatga gtaagttagc
     7081 ggatcattta acaagtaatc caactgctaa tgcccagtat gctgcacttg aagcgtatgt
     7141 tggtagtcaa gaagttccag aaaaaatgta caaagctttt gaagaacgaa tggaacgctt
     7201 ttatccagaa ctaagtagca ttccaggttt taaaccgaaa aaaccagatg gcgcttttta
     7261 tttctttatt gaagtaaaag aagcggcaca taaaaaaggt tttcaggatg tagatgcttt
     7321 tgtagcagct cttttagaag aagcgaaagt cgcagtcatt ccaggctcag gattcggaat
     7381 gcctgattat atacgccttt cttatgcaac aaatccagac ttattccaag aagctataaa
     7441 tcgaatcaaa agttttatga aatagggagt gtagacaagt gaaaattaca atcaatcaag
     7501 catccgaatt tgtcggaaaa gaagtaacta ttggagcatg gcttgcgaat aagcgttcaa
     7561 gtggtaaaat tgctttctta caattacgtg atggaacagg atttatgcaa ggcgttgtcg
     7621 taaaagcaga agttggcgat gatattttcg caactgctaa agcattaacc caagaaacaa
     7681 gtttatatgt cacaggtaca attaacgaag atactcgttc accatttggt tatgaaatgg
     7741 ctgtatctgg tgtagaagta attagcgaat cacatgatta tccaattaca ccaaaagagc
     7801 atggcacgga atttttaatg gaccaccgtc atttatggct acgttctaac cgtcaacatg
     7861 cgattatgaa aattcgtaac gaaattatac gcgctagcta tgagtttttc aataaagaag
     7921 gattcctaaa aatcgatcca ccaatcttga ccggaagtgc tccagaagga acaaccgaac
     7981 ttttccatac gaaatatttt gatgaagatg cgtttctatc tcaaagtggt caattgtaca
     8041 tggaagcagc agcaatggct ttcggtaaag tattctcatt cggtccaact ttccgtgctg
     8101 agaaatcaaa aactcgccgt cacttaattg aattctggat gattgaaccg gaaatggcat
     8161 tttacaaatt agaagatagc ttacaagtac aagaaaacta cgtggcattc ctagtaaaag
     8221 cagttcttga taactgccgc ttagaactag atcgccttgg tcgtgatgtt agtcatttag
     8281 aaaaaatggt tgcaccgttc ccgcgtatta cttatacaga agcaatcgaa cgtttacacg
     8341 aattaggctt tgatgatatt gtttggggag atgacttcgg ggcaccacat gaaacagcga
     8401 ttgcagacag cttcgaaaaa ccagttttca ttacacatta tccaaaagca attaaaccat
     8461 tttatatgcc ggaagatcca gaaaacgatc aagttgtgtt gtgcgctgat atgattgctc
     8521 cagaaggata cggagaaatc attggtggat cggaacgtat tcacgattta gaaacgcttc
     8581 aagctagaat ggaagacttc gatttggatc aagaagccta cagctggtac cttgacttag
     8641 ctcgttatgg ctctgttcca cattccggtt ttggtcttgg cttagaacgt acagttgctt
     8701 ggatttcggg cacagaacat gtacgtgaaa ccattccgtt cccacgttta ctaaaccgtt
     8761 tatatccgta agttaaaaag tgaagccaac atactggctt cacttttttt gtggacttta
     8821 aattgaaaat aatcttttcc gcgggatttc atgattttag cagtactttt atatttttcc
     8881 ctcgaaaacc atgttataat tttgtagtga ggtgttaaat atgaatccaa aaattcttga
     8941 aaaatggatg gctgaagggc aagtgacatt accgcaagtg ctagtgaaaa actatgcaac
     9001 cattggctta aacgaagtag aactagtgct attacttcaa attcaatcct ttgcagcaga
     9061 ggcagaattt ttcccgtcga tggaaatgtt aaccaataga acaacgcttc cactggaaga
     9121 aacaattaaa acgatggact cactcttgaa aaaaggtgtg attgctatcg aacaaagcca
     9181 agataattca cgaatgattt ctgaacaata taatttggca ccactctggg gtaaactagt
     9241 cgctttatat gaaaacaagg aagcagatag taaacatgaa aaagagttag aaaaacaaac
     9301 cagtttatat actctattcg aagcagagtt tggaagaccg ctttctccaa tggaagcaga
     9361 aatgttatcc gcgtgggtag agcaagatag aacgagcccg gatttaatca aagaagcatt
     9421 aaaagaagct gttatttcgc aaaaattaaa tttccgatat attgatagga ttctgcttaa
     9481 ctggtcgaaa caaggagtta agacaataga agatgccaag cgtgtagcgg aagaatttca
     9541 tcaaaatggg cgcacaagcc aagcaattaa ccaaacggaa gtgaaaaaaa gcgcaggttc
     9601 gattcctcta tacgactggc ttgaaaaaag aaaagggtga ggtacacaaa ttgttatcga
     9661 ataaacaaac cgtattatgc atagaagaaa tggcaaaaat gtttccagca gcacactgtg
     9721 agctagttca taaaaatacg tttgaattac tggtggctgt tgtcttatcc gctcaatgta
     9781 cagatgtgtt agtaaatcgc gtgactgcct cgctgtttga aaaatatcac tcaccagaag
     9841 attatttggc tgttccactg gaagaattga tggaagatat tcgctctatt ggcttatatc
     9901 gtaataaagc aaaaaatatt caaggattat ccgagaaaat tctaatcgaa tttaatgggg
     9961 aagtaccaaa gacgcatgcg gaacttgaga gccttccagg tgtaggtaga aaaacggcca
    10021 atgttgtttt atcagttggc tttggtattc cagcaatcgc agtagataca catgtcgaac
    10081 gaattagtaa acgcttaggg atttgtagat ggaaagattc tgttgtagaa gtggaagaaa
    10141 cgttaaaaag aaagctacca aaagaactct ggtctgatgc acatcattat atgattttct
    10201 ttggaagata tcattgtaaa gcaagaaacc cagaatgccc gacctgtccc ttactctatt
    10261 tatgcagaga aggaaaaaaa caagcgaaag tgaggggatt cgatggctga atttaaatat
    10321 gcagtagaat taacacatcc tgatttccca gcaccggatg ttattttaga agaatatgat
    10381 ccagaatcca tttatgttag tggtctacct ttttggcaag aacaacagtt ttttaccaaa
    10441 ggtggtggag ttattccttg gaaaaatgaa acagagcgag cttgtcgcaa attggcgaaa
    10501 catatgacta atttggctga aagtatggaa gctgatttga aagtgcataa aaaaccatct
    10561 cctgtaacgg ttagagatgc gctcggtatt tttttatcta ttttattttg gagtaatcac
    10621 cggccagtac agctagataa tttgatggac caaattaaaa cgttggagac aaaaccactc
    10681 aatttagatg agcggttaga atatgtatta aagcgaggta atacgtattt aggttttcgg
    10741 caattaaatg aattaatgtt agaacagcgt aaattaattg cgaaaagatc ataaaaaaga
    10801 gcggaagatg tttaaacatc ttccgctctt tttgtattaa ctatctggaa ttttaactgt
    10861 agtagaggag gcagggcttc gattaccgtc tttaacagcg acgacgttaa tggaaacagt
    10921 gtctccagga ttacctccgc ttactgaaac ggaagtagaa gatactgtcg tagtagaacc
    10981 attgactgtt acttcatagg ttgcaccatc taccgcagac caagaaacat tgatttgctt
    11041 agagccggca ttataacttg ctcttaagcc ggcaggggca gtaagatttt tggcttcttc
    11101 ttcagccttt ttcttagctt cctcttctgc tttcttctta gcctcttctt cttttttctt
    11161 ctcttcatct gttttctttt tatcttcttc cgcttttttc ttcttcgcag cttcttctgc
    11221 ttttttcttc tcgtcttctg gagtagaagc agttttggtt ggagcggttc cggataagaa
    11281 taattcgtaa cttactttat cacttgcagt gcctgcagca gcgcgtgcaa ttgggttgct
    11341 tccttttaga attgggacgg aaacaacatt gctaggcatt ttgaaatctg cagtagtttt
    11401 accggcagat gcatgagcca ttaatttact aaacatccgc tgcgcaattt tttgttcact
    11461 tgctgaaaca tattttttct tgtcatcata gccggtccat acagcaatcg aataattggt
    11521 tgtatatcca gcgaaccatg agtcacgggc agcaccacta gggtagtagt acttcgaagt
    11581 gaattcaggt ggaatattcg ttgtacctgt tttaccagca gcaggtacgc ctggtacggc
    11641 tgctgatgta cctgttccga tagaaagaac atcttttaga acatctgaaa ccatataagc
    11701 agttgattct ttcatagcaa cagtactttg tggttctgtg tcaatttctg tttgtccatc
    11761 tgataaaacg atttttgtaa cagtgtgtgg cttgttatag attcctttgt taccgaatgc
    11821 agcataggca ccagccattt gcattgggtt ggaactgttt gctccaatag cgttggattc
    11881 tacgttttgt ccttcatcat aggtgatgcc aagtttatta acaaattcct cggatttatc
    11941 tagcccaaca gcttgaaggg tttttagggc tggaatatta cgtgattggt aaagtgcttg
    12001 tcttactgaa attggtcctt tgtatgcgaa atcccagttg ttaatagggg ttccgccaga
    12061 atacgtatat ggttcatctt ctaaaatatg ggcagtcgac caatccaaat attcaaaagc
    12121 aggaccatag tcagcaattg gtttcatggt agacccaaca gaacgtttta cttgggttgc
    12181 atagttatat ccccgagtta ctttttgttt acgtccgcct ccgattgctt gaacacgtcc
    12241 agttttagta tcttgaagca ctataccggc ttgcatttca tcatcagtga agttaacaat
    12301 ttcgttcgta ttgagcattt tctccgtata ttcttgggca tcacggtcaa gcgctgtatg
    12361 gatagttaaa ccatcacgat aaacatcgta ttcttttgga atttcactta acacttgtgt
    12421 gacgtaagaa tcgtatttgt aaattttatc ttcacgatct tttttcgagc gaagtccggt
    12481 agtgatagat gttttttgag cttcggtcat ttcttctttt gtaattttat catgtgtata
    12541 catatttgtt aaaacttgat cacgacgttt ttttgctgct tctgggtgtt cataaggatt
    12601 gtagttattc ggactttgtg gcatacctgc aagtagggct gtttgagcta acgtaaggtc
    12661 tttcaaattt ttaccgaagt aatgttcgga agctgtttgc atgccgtgga cacggtctga
    12721 catatagact ttattaacat aaatttctaa gatgtcattc ttgctatatt tttcttctaa
    12781 ttgaagagct aaccatgctt cttgagcttt tcttgcaagt gttttatttg tgtaatcaag
    12841 ataggacatt ttgatgattt gttgcgaaag ggtacttgca ccttctgcgc caaaaccgtc
    12901 tgtcaaattg gcaattactg ctccaccaag tcgaattggg tcaatgccat catgttcata
    12961 aaaacgcgca tcttccgttg ttagaattgc attttttagt gtttcaggta tatctttgta
    13021 ttcaatatat tcccgccgtt cggttccaac ttctgcgaaa acttttccat ctttatcaag
    13081 taacttagat gaaagtggat ctcgtagctt ggagtcggtc agttttggtg catcttttgc
    13141 gtaatcgtaa aagacagttg caccagccgc aataccaaag aaagctaaaa ataatcccac
    13201 aaagaaaata gttttgaaaa tattcgctac tactcgtttt cctcgttttt gggatttctt
    13261 tttagaacca ccactttgtt tattgcgata ctgagatctt gtctgcggtt tatctgccat
    13321 taaaaatctc tctcctttaa aaaaggtttg actagaagta taatttgtct atggattgca
    13381 agaagtcaag ccttggattt agaccataag gaatttggtc tgatacatct tgtatttctg
    13441 ctatagtaac tgattttctt ccaccacttt gcatacgttc ccaaaacgga taaaatttct
    13501 caaagggaat gaaatgagtt tctccgagtt tttggaaagc aataatgaca aatacaatac
    13561 catcttgttt taagacgttt gccatgtgtg tcatttggtg atcgtgaaaa ttactcaacg
    13621 gaaaagaagt tgtattttgc gtttcttttg cttcaaaatc aacgtatttt cctttataca
    13681 caccattata atctgttgtg gatggtgttt tgaagtaggc ttccttaatt ttggcactac
    13741 ttctttttgg gtagtccaca ctgacaattt ggacaggggt aggttttttg tggatgactg
    13801 ctatttcgtg agttaaataa tacgcaatcg tatcatttag gtcatcttcc aaagacatac
    13861 cacgcttacc ataagttaca ggagctttcc gtttttgttg aggaagaacc tcatgactcg
    13921 ctgcatactt cttgccgtta gggtaaccaa tagccatttt tttcacctct atcagaaaat
    13981 ttctattctg aattttagac tatcatctat tataacaaat aaaaatgaaa atgatagtat
    14041 caattaaatg caaaatagct cttttcggca tgaaactacc tcataaatag aacgtacctt
    14101 cgtctatttt accatatttt agctaataat ctaattttag gcaagatttt gcgtcctatg
    14161 ctatgcttga agtatctgaa aatgtgaaga aaagagtgat agaatggaac ttttaaaccg
    14221 tacggaaaaa ttgcttcttc aaaacgaaaa aaattgggaa ttatatttaa gtaaccgtga
    14281 agaagcaaag ccgtttgatt tttataaaga tatgaaacct ttcgttgacg aagcaaaaaa
    14341 tagcgcggat gcgtttttag aattagctat tccgtgggta aacaaagagc gtcctcctta
    14401 tttaggagaa ctacaattaa gacaagcttg tgataatgtt caaatgactg cagtaagtgc
    14461 atttaatgga aagtcttttt ataaacactt cctagatcac taccaatcta ccaagtatac
    14521 actaacgaga gtgagagatt tcttaaaaag aaaagaggaa ttgatgtgaa atccatcgca
    14581 gtgacggggt ataaaaattt tgaactggga atttttaaaa aggatgcaga tgaagcggtt
    14641 tatataaaag aaacaattaa acggcatttg cttccactcg tggaagatgg gcttgaatgg
    14701 gtgattattt ctggtcagtt aggaattgaa ctttgggctg gcgatgtggt tgcagaatta
    14761 aaagcagact atccgattaa actagcaatc cttgaaccgt ttgaaaagca aagtgctaac
    14821 tggaatgaag cgaaccaatt atgggcgagc gaagtactag aaaaagccga ttaccatgct
    14881 tttattacga agcgtcctta tgaaagtcca gcgcaatttg cggcaagaga tggttttatt
    14941 attgataata cggatggcgc attacttgta tatgatttag aaaaagaagg ttcgccgaaa
    15001 ttcttttatg accgagcgat tcaagcaaaa gaacagtcta attattatat agactgtatt
    15061 gatttttatg cactccaaga
//
LOCUS       DASDYK010000061        14969 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.061, whole genome shotgun sequence.
ACCESSION   DASDYK010000061 DASDYK010000000
VERSION     DASDYK010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14969)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14969)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14969
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.061"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(276..1103)
                     /locus_tag="U0308_001831"
     CDS             complement(276..1103)
                     /locus_tag="U0308_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2316794.1"
                     /translation="MANVAIDTVITDMDGTLLVKKGDQIHPLNKEVLMEWQKNGKKLF
                     LATGRLDLAILPFIHELNIKTPVISCNGGLVRDFTTGEILYKSNIELDLIHTVLETLE
                     PLDVNYHIYTTERILGPTNTGKIAFFNELNKTLPENEQVPITLTTDPFSVLREGEFPL
                     KVLVIESDLEKRAEIKAALEGLPLSVLASASNLIDIMNEGIDKAKGLTYLAENGYINL
                     DSTIAFGDNENDVGMIELAEIGVAMENGIPLALEKADKIAKHHDIGGLGLFMQEEIL"
     gene            1218..2093
                     /locus_tag="U0308_001832"
     CDS             1218..2093
                     /locus_tag="U0308_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2316795.1"
                     /translation="MKKYFITIMILLFGALFLSACQKDDEVENSSPPKVDLKNEIPII
                     LIHGSGGDTHSLDEMADHLMNEYKSSNEAMSMSINSKGKITYQGKLTKDAKRPIIKFG
                     FDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPT
                     LRKLVAIGSPFNDLDPDDNGEDLAFNKLPSNTPQLDYFIDKETKISTDLEVLSIAGAL
                     SEDNLTDGIVPTNSSLASRLFMPNNAKVYMEDLQVGESAIHQTLHETSESIEKTHWFL
                     EKSSPEKKEIKLISK"
     gene            2104..2397
                     /locus_tag="U0308_001833"
     CDS             2104..2397
                     /locus_tag="U0308_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEM2316796.1"
                     /translation="MLHIQAKVQVKPDLVAEFLVEVNLVIQGSLSETENHGYELVHSV
                     ENANIFYILEKWTDEAAIQFHNGTEHYKRFKKNVPAFLAMPIEVDLLAPVERR"
     gene            complement(2313..2552)
                     /locus_tag="U0308_001834"
     CDS             complement(2313..2552)
                     /locus_tag="U0308_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316797.1"
                     /translation="MDGEQTIESLEVEEIVYEQIIRTKEGYTNTGKFIFTKTKMMLVA
                     KKFLLKKYYRRSTGASKSTSIGIAKKAGTFFLKRL"
     gene            complement(2621..3289)
                     /locus_tag="U0308_001835"
     CDS             complement(2621..3289)
                     /locus_tag="U0308_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316798.1"
                     /translation="MTLMMKNISKNYQDGEQVIEVLKNVSLEVAQGEFVAIVGPSGAG
                     KSTFLSIAGALLSPTEGEIAIGGKVLNDLTSKELTKVRLDKVGFIFQGANLIPYLNVR
                     DQLLVIAELSGEKGRGAKEKADELLKELGLTARENNYPESLSGGEKQRVAIARALMND
                     PDIILADEPTASLDANRGHKVVQMIANEVKRKNKAAIMVTHDERVLDLVDRVIRIEDG
                     YLKD"
     gene            complement(3289..4377)
                     /locus_tag="U0308_001836"
     CDS             complement(3289..4377)
                     /locus_tag="U0308_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2316799.1"
                     /translation="MFLALRELKHAKLRYILIGLIMVLIAWLVLFVTGLANGLANDNG
                     AAISSNKATYYVLQKDSDNRLTRSNLTASETDSVAKQVKKSESTNLGVQMGTITPPNK
                     DKKTDITYFGIDKTGFMKPAITEGTEPEKTKEVVADISLKESGYKLGSKLKDSATGEE
                     FTITAFTKNNTFSHSPVIFVGWDAWKLVHQTNQAAEGEYNAVALDVSESTAKNLSLGS
                     MELSSSKEVLQGIPGYSEEQGSLLMMIAFLFVIAAFVLAAFFYVITIQKINQFGILKA
                     VGARTAYLGRSIVTQVVFLSVVSLLIGNGLTFGLAAILPASMPFTLSPVLAIGCSALF
                     LVVAVIGSMLSLYRVAKVDALEAIGRAN"
     gene            complement(4456..5835)
                     /locus_tag="U0308_001837"
     CDS             complement(4456..5835)
                     /locus_tag="U0308_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEM2316800.1"
                     /translation="MKSLYSRIVVTMLVVIISSSLLGFFFANIYYQIKLKPFNDEKTA
                     KIAEEVQQFYESNATISLNEYLENVGELGYELYLTDGAEKSTYYGGAFRKKDLPDKTI
                     KQVLDGETYHGIDSFDTGIFITGFFDNDVRNTIGVPVQADGKQLALFIRQDPEKQFGE
                     LRIFFAMILIFTSIISILLVLISGRYIVKPVVKLTNATKKIRKGNYDVAFEVRRKDEI
                     GQLADSFTKMASELKKSEASRQEFVANVSHELQSPLTSMQGFARLLGSGTLTEKEQAE
                     YLTVLSEETTRLSSLTKQLLTLASLDQESELRKKEPVHLDEQWRQLIQMTEWSWREKE
                     LTINLDLADVNYTGDAELLYQVWSNLLTNAIKFTPQGGNIKVHLYEKATYVFVEVQDS
                     GVGIGKEDMAKIFDRFYKANESRTREEGSSGLGLSICQKIITLHHGEITVQSSPEKGT
                     TFKVKLPKN"
     gene            complement(5832..6509)
                     /locus_tag="U0308_001838"
     CDS             complement(5832..6509)
                     /locus_tag="U0308_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2316801.1"
                     /translation="MKQILVVDDDRHILKLVGHYLRAEGFRVLEASDGVEAEKIVETE
                     QVHLAVIDVMMPNMDGFELCKKMRTSYPDIPVIMLTAKDALADKSRGFEVGTDDYVTK
                     PFEPEELIFRIRALLRRSNQASEVKINIGNITIDQKSYGIKIGNQERMIPVKEFELLY
                     QLASYPGRIFTREELIERIWQRDYDGSDRTVDVHIKRLRDHFDEEKDGIRIVTVRGVG
                     YKLEETT"
     gene            complement(6556..7341)
                     /gene="fdhD"
                     /locus_tag="U0308_001839"
     CDS             complement(6556..7341)
                     /gene="fdhD"
                     /locus_tag="U0308_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEM2316802.1"
                     /translation="MDIVSHQKIRRFEAGTFQEIESSVATEYPLTIYVNDQELVTIVC
                     TPEYLEDLVVGFLTSEGIVRGPQDIDSVDIIEATGHAKVSANFVNKFNAKYRGKRYIT
                     SCCGKSRENFYFQSDASLVNVKQNGSLQLTTDMIFRLMENFEQNSATFHQTGGVHNAA
                     LCSSAEIIYSRMDIGRHNALDKIYGRALQDGTSTEDKAIIFSGRISSEILVKTAKLGC
                     GIILSRSAPTELAINMAEELNITTVGFIRGDRLNVYSGFERIT"
     gene            complement(7403..7879)
                     /locus_tag="U0308_001840"
     CDS             complement(7403..7879)
                     /locus_tag="U0308_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1641 domain-containing protein"
                     /protein_id="HEM2316803.1"
                     /translation="MAEPISTIRDTKKTPEELEHERLEQMKADIAEQDSGFVEIVETV
                     KLLQESGALEALNSAIKARGDITKTFLNEWRKEPMTNAINNMMISSKLLTDTKPEQTE
                     EMIANLKNAAKKAEESAKKDEIMGMLAMMKALKDPDINRALRYGVTFLKEVGQTLK"
     gene            complement(7879..10866)
                     /gene="fdhF"
                     /locus_tag="U0308_001841"
     CDS             complement(7879..10866)
                     /gene="fdhF"
                     /locus_tag="U0308_001841"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HEM2316804.1"
                     /translation="MGAKVSVQINGVARDVVEGTRILDYLNAEGIQHPHICYSEQIGP
                     IQSCDTCMCEVDGELVRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVC
                     DNNNGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQ
                     VQVNETLSIDWERSQPRVIWDDDRPANLSSCVSCGLCATVCPCNALMEKSMLGQAGFM
                     TGLDEDMLEPMIDMVKKVEPNYQTVFAVSEMEAAMRETRTKKTKTVCTFCGVGCTFEV
                     WTKDRKILKVEPTGEGPVNKFATCVKGKFGWDFVNSEKRITTPLIREGNEFVPASWED
                     AIHLVATKLREIQAKYGNDSIGFISSSKTTNEENYLMQKLARQVFETNNIDNCSRYCQ
                     APASDGLTRTVGIGADSGTVEDIETAGLVIIVGASPADGHPVLASRIKRAQKTRGQKL
                     IVSDLRKHEMAERSDLFMHPKQGTDFVWLTAVAKYMIDQGWHDEAFMENRISNVADYL
                     SFLEPFTLEYAEKETGLSVETLKKVAQMVYEADGTAVCWGMGVTQNIAGSHTSSAIAN
                     LLLVTGNFGRHGAGAYPLRGHNNVQGACDMGSLPNVLPGIQPLGNDEVRARFEEAYGV
                     SISPEPGLKNNEMLDAIEAGTLHSMYVIGEEMAWVDSNSNHVQEILASLDFFVVQDVF
                     LSKTAQFADVVFPAAPSLEKEGTFTNTERRVQRLYEVLEPLGDSKPDWWIIQEVAKAC
                     GKTDWNYDHPSEIMDEIASLAPFFAGVRYDRMQGFNSLVWPVSADGKDMPLLYEERFN
                     FPDGKAQFSTLPYIAPITFPEEYNLTLNNGRLLEQFHEGNLTDKSKGLDYKLPEVFVE
                     VSHELAKERDLESGSLVRLSSPYGRIKLRAVVTERMKGNEVYVPMHSVSSETAVNLLT
                     SSAGDVRTKTPAYKQTKVNLTVLEKTGKNPLPDHNPRNRKRFPQNGAEVARKWSREDY
                     QPISKVNCACGGNCGCGGKRRNH"
     misc_binding    11046..11294
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            11364..12206
                     /locus_tag="U0308_001842"
     CDS             11364..12206
                     /locus_tag="U0308_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosyl-l-methionine hydroxide
                     adenosyltransferase family protein"
                     /protein_id="HEM2316805.1"
                     /translation="MTKQLLVLQSDFGISDGAVSAMYGVINSVSLDLQIYDLTHQIPQ
                     FNIWEASYRLLQTVTYWPEDTIFVSIVDPGVGSKRRSVAVLTEDGHYIITPDNGTLTH
                     IAHYGTIKEVRLIDEEKNRLPKSGASHTFHGRDIFAYTAARLAAGVINFEDIGPSATP
                     DSIVSLSLSDSYLEGEQAFGTIDIIDRPFGNLWTNIRRTDFLQLGANYGDSIEVLIKH
                     HDRVVYKNFVTYSRSFADLRIGEALIYVNSLDNLGLGINQGSFVDAYSVGTGTSWKVT
                     LKKV"
     gene            complement(12256..13737)
                     /locus_tag="U0308_001843"
     CDS             complement(12256..13737)
                     /locus_tag="U0308_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter"
                     /protein_id="HEM2316806.1"
                     /translation="MNSTAVERPVDVNGKSYSRSLLVVTMIIGAFVAILNQTLLATAL
                     PMIMDDLHITAATGQWLTTAFLLTNGIMIPITALLIEKISSKTLFITAMTVFTIGTII
                     ASVAGSFPVLLTGRIVQAAGAGIMMPLLQTIFLLIFPREKRGAAMGLMGLVIAFAPAI
                     GPTLSGWIVDSYDWRVLFLILIPIAVIDIILAFFGMKKVVKLTDTKIDFLSIVMSSIG
                     FGSLLYGFSSAGNDGWGDATVITMLIVGVVVIALFVWRQLVIDNPMLELHVFKYPVFS
                     LSVILGSIVTMAMIGAEIVLPLYIQTIRGESALQSGLLLLPGAIIMGIMSPITGIIFD
                     KIGAKWLTITGVTILTIGTIPFMFLTMDTPLWYIVVFYAVRFFGISMAMMPVSTAGMN
                     ALPNHLINHGSAVNNTIRQIAGSIGTAVLITVLTNVTKDNMPGKALMATDPASFAQKA
                     QDASLDGMRAAFMVAAIFAAIGMILSLFLKTKKQEPIVKEYTK"
     gene            complement(13838..14725)
                     /locus_tag="U0308_001844"
     CDS             complement(13838..14725)
                     /locus_tag="U0308_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2316807.1"
                     /translation="MKEKKQRIIKSAKEVFQKQGYLKTSVQDMVDAAGISKGTFYNYF
                     TSKEELAIVIFKQEYSVLHQRLEYTMGLDGTKKDNFTECLKIIIHFYTENGEILNITF
                     SQTMIDDDFNAFLQNVRLKNMEWVKNQLLEVYGKETEPYINDITMLLSGMAAMYVFAS
                     GSKNVDSGLIERAIPYVVRRLDALVKDILESGEIVFTEADTENLVPDQTMIRKKRLAK
                     LRGALEELNVGIENADIDDSDKWQYKESMNALVGEINNNEAPRDFMVQGTLLYLKQHV
                     PASLTKEVNKLEACVNGLL"
     gene            complement(14878..14950)
                     /locus_tag="U0308_001845"
     tRNA            complement(14878..14950)
                     /locus_tag="U0308_001845"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14915..14917),aa:Thr,seq:ggt)
BASE COUNT         4344 a         3447 c         2578 g         4600 t
ORIGIN      
        1 gattcatata aaatgaaact aacggaagta attctacgag tacaagagtc atgtatccag
       61 caaatataaa aaagtccacc aaaatgaaat tagcaggtaa atctactaaa gaaattatac
      121 gagcgttaaa catcaaaaaa ctaacacaac aaaaattagg ctaccaatct cccattaatt
      181 tcaggaaaca agcagcctaa tttaagtgat ttttattcca ttctcatttt tttatgtcag
      241 tacattagtg aaataatatc taatagttct ttttcttata aaatttcttc ttgcataaat
      301 aaccctagcc cgccgatatc atgatgcttt gcgattttat ctgctttttc taaagctagc
      361 ggaatgccat tctccattgc tacaccaatt tcggctaatt caatcatacc gacatcattt
      421 tcattatccc caaaagcaat tgttgaatca agattaatgt aaccattttc cgcaagataa
      481 gtgagacctt ttgccttatc aattccttca ttcataatat caattaaatt cgaggcagac
      541 gcaagaacag aaagtggcaa gccttctaaa gctgctttga tttctgctcg tttttctaaa
      601 tctgattcaa ttacgagtac ttttagtggg aattcacctt cccgaagcac gctgaatgga
      661 tccgtagtta aagtaattgg aacttgttca ttttccggta aagttttatt taattcattg
      721 aaaaaggcga ttttgcctgt attggttggt ccgagaattc gctccgttgt ataaatatga
      781 taattaacgt ccagcggttc aagcgtttct aataccgtat gtatcaaatc cagttcaata
      841 ttacttttat ataaaatctc tccagtagta aaatcgcgta ctaatccgcc attacaagaa
      901 atgactggcg ttttgatatt gagctcgtgg ataaatggta aaattgctaa atccagtcgc
      961 cccgttgcaa ggaaaagttt ttttccgttt ttttgccatt ccattaaaac ttctttgttg
     1021 aggggatgaa tttgatcacc tttttttact agtaatgttc cgtccatatc tgtaataact
     1081 gtatcaatcg ctacatttgc caatagtttt cgcacccttc taaatttccg ttattatgta
     1141 cctcgattat agacgagttt cgcatgattg tcacgccgat atttggtata ctaaatggga
     1201 atggaggacg ataattagtg aagaaatatt ttataacaat catgatttta ctttttggcg
     1261 cgttatttct cagtgcttgt caaaaagatg acgaggttga aaattcttct cctcctaaag
     1321 tagacttaaa aaacgaaata cccattattt taattcatgg gagcggtggc gatacacatt
     1381 ctttagatga aatggcagat cacttaatga atgaatacaa aagttctaat gaagcaatgt
     1441 caatgtcaat taactcaaaa ggaaaaatca cataccaagg caagctaaca aaagatgcca
     1501 aacgtcccat tatcaaattt ggcttcgacc aaaaccaagc aactccagat gattggtcta
     1561 aatggttaaa aatcgcaatg gaagatttga agtcacgtta cggtttcaca caaatggacg
     1621 gagttggtca ttctaacggc ggcttggctt taacttattt tgcagaagac tactctaatg
     1681 acaacgctgt ccctactctg cgcaaattag ttgctattgg ctctcctttt aatgatttgg
     1741 acccagacga taatggcgaa gatttagctt ttaataaatt accatccaac acccctcaac
     1801 tagattattt tattgacaag gagactaaaa ttagtactga cctagaagta ctatccattg
     1861 ctggagctct tagtgaagat aatttaaccg atggtattgt cccaacgaat agttcactcg
     1921 cttccagact tttcatgcct aataacgcaa aagtctatat ggaagattta caagttggtg
     1981 aaagtgctat tcaccaaaca ttgcatgaaa catctgaaag tatcgaaaag acacattggt
     2041 tcttagagaa atcgagcccc gaaaaaaaag aaattaaatt aatttctaaa taggaggaat
     2101 aatatgctac atatacaagc aaaagtccaa gttaaacctg atttagtagc ggaattcttg
     2161 gtggaagtga atttagtaat ccaaggctcg ctttcagaaa ccgaaaatca tggctacgaa
     2221 ttggttcact ctgtagaaaa cgcaaatatt ttctatattc tagaaaagtg gactgatgaa
     2281 gcagcaattc agtttcataa cgggacagag cattataaac gtttcaaaaa aaatgtcccc
     2341 gcttttttag caatgccgat tgaggtggat ttacttgcgc cagttgagcg acgatagtat
     2401 ttttttaaca agaatttttt tgcaactaac atcattttcg tcttagtaaa gataaactta
     2461 cctgtattag tatagccttc ttttgtgcgg attatttgtt catacactat ctcctctact
     2521 tcaagtgatt ctattgtttg ctcgccgtcc acattaaatg ggttcccact ttagaaaata
     2581 agcaaaaagg attggctcgc atacgcgagc caatcctttt ttaatccttc aaatagccat
     2641 cttcaatccg aattacgcgg tcaactaagt ctaaaactcg ttcatcatgc gtaaccatga
     2701 tggcagcttt attttttcgt tttacttcat tcgcaatcat ttggactact ttgtgaccac
     2761 ggttcgcatc taagcttgcg gttggttcgt ccgctaaaat aatatcgggg tcgttcatca
     2821 gtgctctagc aatagcgaca cgttgttttt caccacccga taaactttcc gggtaattgt
     2881 tttcgcgagc agttaaacct aattctttaa gtaattcatc tgctttttct ttcgcacccc
     2941 gccctttttc accagatagt tccgcaatta cgagtaactg atcacggaca tttaagtacg
     3001 ggattaggtt cgcaccttgg aaaatgaatc ctactttgtc gagccgcact tttgttaatt
     3061 ctttgcttgt aaggtcattt aacacttttc cacctatagc aatttctcct tctgttgggg
     3121 ataataaggc gcctgcgata gataaaaatg tacttttccc ggcgcctgaa ggtccaacga
     3181 ttgcaacgaa ttctccttgc gccacttcta aagatacatt tttcaatact tcgatgactt
     3241 gctcgccatc ctgataattt ttagaaatat ttttcatcat taaagtcatt agtttgccct
     3301 cccaattgct tctaacgcgt ctacttttgc tacacgatag agtgataaca tcgatccaat
     3361 gactgctaca acaaggaata aggcagaaca gccgattgca agtaccgggc taagtgtaaa
     3421 tggcatgctc gccggtaaaa ttgctgcaag accgaatgtt aagccattac caattaacaa
     3481 actgacaact gataggaaaa caacttgggt aacgatactt cggcctaaat aggctgttcg
     3541 tgcgccaact gcttttaaaa tcccaaattg gttgattttt tgaatcgtaa tgacgtaaaa
     3601 gaaagcagct agaacaaatg cggcgatgac gaacaaaaag gcaatcatca tcagtagcga
     3661 tccttgttct tctgagtagc cagggatacc ttgaagcact tctttactag acgaaagttc
     3721 catggagccg agtgataggt ttttagctgt gctttcagaa acatctagcg ctacggcgtt
     3781 atattctcct tctgctgctt ggttcgtttg atgcactaat ttccaagcat cccagccgac
     3841 gaatataacc ggcgaatggc taaatgtgtt atttttggtg aaggcggtaa tcgtgaactc
     3901 ttctcctgtt gcgctatctt tgagtttgct gcctaattta taaccagact cttttaaaga
     3961 aatatcggct actacttctt ttgttttctc tggctctgtt ccttctgtga tggccggttt
     4021 catgaagcct gttttatcta taccgaaata agtaatgtct gtttttttat ctttgttggg
     4081 tggtgtgatc gtgcccattt gcacgcccag gttggtgctt tctgattttt tcacttgctt
     4141 cgctacgctg tctgtttcgg acgcggttaa attggacctc gttaagcgat tatccgagtc
     4201 tttttgtaaa acataataag ttgctttatt ggatgaaatg gctgccccat tgtcgtttgc
     4261 aagtccattc gcaagtcccg ttacaaacaa aacaagccat gcgattaaca ccataattaa
     4321 tccaattaga atatagcgta attttgcgtg ttttaattct cttaatgcca aaaacattcc
     4381 gttcaactcc ttctaagatc ttatccttag tttaaagaag ttttgtaaac ggaatgtgaa
     4441 tcggatttta caaatttagt tttttggtag tttgactttg aatgtcgtgc ctttttcggg
     4501 gctactttgc acggttattt cgccgtgatg gagcgtgata attttctggc aaatggataa
     4561 tccgaggcca ctcgagcctt cttctcgggt tcggctttcg ttagctttat aaaaacggtc
     4621 aaaaatcttg gccatatcct ccttacctat gccgacaccg ctatcttgaa cttctacaaa
     4681 aacatacgtc gctttttcat aaaggtggac tttgatattc ccgccctgtg gtgtgaactt
     4741 aatcgcatta gttaacaaat tggaccacac ttgataaagt aattcagcat cacccgtata
     4801 gtttacatct gctaagtcta aatttattgt tagttctttt tcgcgccaac tccactcggt
     4861 catttggatt aattgacgcc actgctcgtc taagtgaact ggctcttttt ttcgcaactc
     4921 tgattcttgg tcaagtgaag cgagtgtgag tagttgtttg gttaaggaag atagacgtgt
     4981 tgtctcctct gataacacgg ttaaatattc ggcttgttct ttttcggtta gtgttccaga
     5041 acctaaaagt ctcgcaaagc cttgcatgga tgtgagcgga gattgtagtt catgagaaac
     5101 attggcgaca aattcttgac gggaagcttc agattttttg agttcactag ccattttcgt
     5161 aaacgagtct gccaactgcc caatttcatc cttacgccga acttcaaagg ctacatcata
     5221 attgccttta cgtatttttt tcgtcgcatt cgtcaacttc acgacaggtt tgacaatata
     5281 tctgccacta ataagaacca acagaatact gatgatggat gtgaaaataa gtatcatcgc
     5341 gaaaaatatt cgaagttccc caaattgttt ttccgggtct tggcgtatga atagcgctag
     5401 ttgtttacca tcagcttgga ccgggacacc aatggtattt cgcacatcat tatcaaaaaa
     5461 gcctgtgatg aaaatgcctg tatcaaacga atcaattcca tgatatgtct ctccgtccag
     5521 tacttgcttg attgtcttat ccggtaaatc ttttttccga aaagcgccac cataataagt
     5581 ggatttttcc gcgccatctg tcaaatataa ttcgtatccc agttcgccca cattttccaa
     5641 gtactcgttt aaagaaatcg tagcatttga ctcataaaat tgttggactt cctccgctat
     5701 tttggcagtt ttttcgtcat taaaaggttt taattttatt tggtaataaa tgtttgcaaa
     5761 gaaaaagccg agcaaactac tggaaataat gacgacaagc atcgtgacaa ctattcgact
     5821 atataacgat ttcatgttgt ctcctccaat ttataaccaa cgccgcgcac cgtaacaatt
     5881 cgaataccat ccttttcttc atcaaaatgg tcccgcaatc gtttaatatg tacatccact
     5941 gtacggtcac taccatcata atcacgttgc caaatccgct caattaattc ttctcgagta
     6001 aaaatccggc caggatagct tgctagctga tataaaagct caaattcttt cacgggaatc
     6061 attcgttctt ggttgccaat ttttatacca tagctttttt gatcgatagt aatatttccg
     6121 atattaattt tgacttcgct cgcttgatta gaacgccgta gcaacgcacg aattcgaaag
     6181 attagctctt ctggttcaaa gggttttgtg acataatcat ctgttcccac ttcaaaaccg
     6241 cgtgatttat ccgccagcgc atctttggct gtcaacataa taacagggat atcaggataa
     6301 cttgtgcgca tttttttgca aagttcaaaa ccatccatgt tgggcatcat cacatcaatt
     6361 acagctaaat gaacttgctc tgtttcaact attttttctg cttctacccc atcgcttgcc
     6421 tcaagtacac ggaagccttc tgcacgcaaa tagtggccca caagtttaag tatatgccga
     6481 tcatcatcta ctactaatat ttgtttcatt ttcaccgctc accttactgt cctattttac
     6541 tgcatcatat caaacttacg tgattcgttc aaatccagaa tagacattta acctatcacc
     6601 acgaataaag ccaacggttg taatatttaa ttcttcggcc atattaatcg ccagttcggt
     6661 tggggcagaa cgagacaaaa taattccgca acctagtttt gctgttttaa cgaggatttc
     6721 cgaagaaatg cgcccactaa aaataattgc cttatcttca gtggatgttc cgtcttgcaa
     6781 ggcacggcca tatattttat ctaaggcatt atggcgacct atgtccatcc tgctgtatat
     6841 aatttccgct gaactacata gagccgcatt atgcacaccc ccagtttgat ggaatgtagc
     6901 agaattttgt tcaaaatttt ccattaagcg gaaaatcatg tcggttgtta gttgtagact
     6961 tccattttgc ttcacattga cgagtgaggc gtctgattgg aagtagaagt tttcccgaga
     7021 cttgccgcaa cacgaggtaa tgtagcgctt gccgcgatac ttggcattga atttgttcac
     7081 aaaattagcg ctaaccttgg cgtgtccagt cgcttcgatg atatccacgg aatcgatgtc
     7141 ttgaggaccc cgaacgatgc cttccgatgt cagaaagccc acaactaaat cttccagata
     7201 ttctggcgtg cagacgatgg tcacgagttc ttggtcgtta acgtagatag ttagcggata
     7261 ctcggtcgca acacttgatt caatttcttg aaaagtgccc gcttcaaaac gacggatttt
     7321 ttggtgcgaa acaatatcca tcaaaaacca ctcctctcta aactgaaaca gcgacacatc
     7381 ttagtctcgc tgtttcgtct acttatttta atgtttgccc aacttctttt aaaaaggtca
     7441 caccataccg gagtgcgcgg ttgatatcgg ggtctttcag cgccttcatc atcgctaaca
     7501 tgcccatgat ttcgtctttt ttcgcgcttt cttctgcttt tttcgcagca tttttcaaat
     7561 tagctatcat ttcctcggtt tgctctggtt ttgtatcagt caatagctta cttgaaatca
     7621 tcatgttatt aatcgcattc gtcatcggtt ccttacgcca ttcattcaga aacgttttcg
     7681 taatatcccc gcgcgcttta atcgcactat tcaaagcttc aagtgccccc gattcctgta
     7741 gtaactttac cgtttctact atctctacaa aaccagaatc ttgttcagca atatccgctt
     7801 tcatttgttc taaacgttca tgttccaatt cttccggggt cttttttgta tcacgaatcg
     7861 ttgaaattgg ttctgccatc agtgattcct ccttttccca ccacacccgc agttaccacc
     7921 acaagcgcag ttcactttag aaatcggttg ataatcttct ctcgaccatt tgcgcgctac
     7981 ctcagcccca ttttgcggga atcttttacg attacgtgga ttgtggtctg gaagtgggtt
     8041 tttccctgtt ttttcaagta cagtgaggtt cacttttgtt tgtttatatg ccggtgtttt
     8101 cgtccgaaca tctcccgcgc ttgaagtcag taagttgacc gcggtttcgc tactcacaga
     8161 atgcattggc acatagacct cattcccttt catccgctca gtcacaacgg cacgaagctt
     8221 gatgcggcca taaggcgaac ttagacgaac gagcgaacca ctttctaaat cgcgttcttt
     8281 ggctaattca tgtgatacct ctacaaacac ttccggtaat ttataatcca accctttcga
     8341 cttatctgtc aaattcccct catggaactg ctccaataaa cgcccattat tcagcgttaa
     8401 attatattct tctgggaaag taatcggtgc aatatacggt aacgtcgaaa attgcgcttt
     8461 gccgtccgga aaattaaatc gttcttcata aagtaacggc atatccttcc catccgcgct
     8521 cactggccat acaaggctgt taaatccttg catccggtca taacgaaccc ctgcaaaaaa
     8581 tggtgctaaa ctagcaattt cgtccataat ctcgctcgga tgatcataat tccagtccgt
     8641 tttgccacac gctttcgcaa cttcttgaat aatccaccag tctggcttcg aatctccaag
     8701 cggctctaac acctcataaa gtcgttgaac acggcgctct gtattggtaa atgttccttc
     8761 tttttcaaga gaaggagctg ctgggaaaac aacatctgca aattgtgctg tttttgataa
     8821 gaacacatct tgaacaacaa agaaatcaag gctcgcaagg atttcttgca catgatttga
     8881 gttagagtcc acccaggcca tttcctcacc aataacatac atagaatgaa gtgttcccgc
     8941 ctcaatagca tcaagcattt cattgttttt cagccctggt tctggtgaaa ttgatacccc
     9001 ataagcttct tcaaaacgag cacgaacctc atcatttcca agcggttgaa ttccaggaag
     9061 aacgttaggt agtgacccca tatcgcaagc accttgcaca ttattatgcc ctctaagcgg
     9121 ataagcgccc gcaccgtgtc ttccgaagtt cccagttaca agaagtaggt tagcgatagc
     9181 agacgatgta tgtgatccag caatattttg cgtaactccc attccccaac aaaccgctgt
     9241 cccgtctgct tcataaacca tctgcgccac ttttttcaat gtttctactg atagtcctgt
     9301 ttctttttcc gcatattcca atgtaaatgg ttctaaaaat gatagataat ctgctacatt
     9361 gctaatccta ttttccataa aggcttcatc gtgccatcct tgatcaatca tatatttcgc
     9421 aaccgctgtt aaccaaacaa aatcggttcc ttgttttgga tgcatgaata aatcagaacg
     9481 ctctgccatt tcgtgttttc gtaaatcaga aacaatcagc ttttgaccgc gtgtcttctg
     9541 agctcgcttg attctgctag caaggactgg atgaccatcg gctggtgatg cgccaacaat
     9601 aatgacaagt ccggccgttt caatatcttc cactgtcccc gaatccgcgc caatcccaac
     9661 tgtccgagtc agcccatccg aagcaggcgc ctgacaataa cgtgaacaat tatcaatatt
     9721 attcgtttca aaaacctgcc gcgccaattt ttgcatcaaa tagttctctt cattggttgt
     9781 tttagaagaa ctaataaatc caatagaatc atttccatat ttagcctgaa tttctcgcag
     9841 tttggtcgca actagatgaa tcgcatcttc ccagctcgcc ggcacaaatt cattaccctc
     9901 gcgaatgagc ggcgtcgtaa tccgtttctc actattgaca aaatcccaac caaatttccc
     9961 tttcacacac gtagcaaatt tgttcacagg accttctccg gttggctcga ctttcaaaat
    10021 tttgcgatcc ttcgtccaca cctcaaacgt acaaccaacc ccgcagaaag tacaaactgt
    10081 cttcgttttc ttcgtccgcg tttcccgcat cgctgcttcc atttccgaca cagcaaagac
    10141 ggtttgataa ttcggctcga cttttttcac catatcaatc atcggttcta gcatatcttc
    10201 gtctaagcca gtcataaagc cagcttggcc aagcattgat ttttccatca acgcgttaca
    10261 aggacacacc gtcgcacaca gcccacaaga aacacaggac gataaattcg ctggacgatc
    10321 atcatcccaa ataacccttg gctgactacg ttcccaatca atcgaaagtg tttcattcac
    10381 ttgtacttgc tgacacgcct ccacacagcg cccacaaaga atacattgat ccggatcata
    10441 acgataaaac ggatgcgaaa aatcattcaa atagcctttt tcgcggtaag gacgttcttg
    10501 tttttccaca ccaagcagtt ccgtcgtatt atgtactttg caattaccgt tattgttatc
    10561 acaaaccgta caatacaata aatgattttc caaaatcctg tccatcgctt ctaattgcgc
    10621 atctttcgct aattcagaat tagttttaat ttccatcccg tctgtcagat tcgtgctgca
    10681 cgcccgcaca agttccccat caacctcgca catacacgta tcacaagatt gaattggtcc
    10741 aatttgctca ctataacaaa tatgcggatg ctgtattcct tctgcattta aatagtccag
    10801 tattcgcgtt ccttccacca catcccgcgc cacgccatta atttgcaccg atacttttgc
    10861 gcccatcaca ttacctccta tatagagaaa gcgtttacaa tttccgctta tattataaca
    10921 gttcttactt aaaaatcaca gtaatacggc aattgataat cgttctcaaa cactgctact
    10981 atgcgatttc tctcacaagg ctaacgaatt cattgacact tatccaactt ttctgtattc
    11041 tttattacaa agctacgacg agaaaagtac gacgtccgtt ttttccaaaa gagagttccc
    11101 actgctgaaa aggaacaaaa aacaacgtcc gaaaatggcc tctgagtttt gtcgctgaaa
    11161 ataagtaagc aacaacgggt ttggtgtccg ttatcaagca ccctaagtat tttatgtaaa
    11221 tgcttatttg aggttttcag tgcaagctgg aaataaatta aggtggtacc gcgtgaaatt
    11281 ttctcgccct tattccaaga tatttttttg gataagggcg agttttattt taccctaaat
    11341 tgctcgaaat ggaggatttc aaaatgacaa aacaactact tgttttacaa tctgattttg
    11401 gtattagtga tggtgcagtt agcgccatgt acggcgtgat taatagcgtt agcctagatt
    11461 tgcaaatata cgatttaacg catcaaattc ctcaatttaa tatttgggaa gcatcgtatc
    11521 gtttactcca aacggttact tattggcccg aagataccat ttttgtttcg attgttgatc
    11581 ctggagttgg ttcgaagcgt cgaagtgtcg ccgttttaac agaagatggt cattatatta
    11641 ttacaccaga caacggaacc ttaacccata tcgcgcatta cggaacaatt aaagaagttc
    11701 gactgataga tgaagaaaaa aatcgcctac caaaatcagg tgcatcccat acatttcacg
    11761 gtcgagatat tttcgcttat accgcggcta ggctcgcagc cggggtgatt aattttgaag
    11821 atatcggtcc atcagctacc ccagactcca ttgtttctct aagtctaagt gactcctact
    11881 tagaaggcga gcaagctttt ggcacaattg atattattga ccgtccattc ggtaatcttt
    11941 ggacaaatat tcgccgaact gatttcttgc agctaggtgc taactatggc gattccatcg
    12001 aagtcctcat caaacaccac gaccgagtag tttataagaa tttcgttact tatagccgct
    12061 catttgccga cttacggatt ggcgaagcgc tcatctacgt caattcactc gacaacctcg
    12121 gactaggtat caatcaaggg tccttcgtag acgcttattc agtcggcacc ggcaccagct
    12181 ggaaagtcac ccttaaaaaa gtataaaaaa cagggtcaaa catccaaatt ggaagtttga
    12241 ccctgtttca tttttttatt tcgtatattc tttgacgatt ggctcttgtt ttttggtttt
    12301 caggaataaa cttaagatca tcccaatagc cgcaaaaatc gctgcaacca taaacgccgc
    12361 acgcattccg tccaaactag catcttgcgc tttttgagca aaactagcag gatccgttgc
    12421 cataagcgct ttacctggca tattatcttt cgttacattc gttagcactg taataagtac
    12481 cgccgtccca atcgaaccag caatttgtcg aatcgtatta tttaccgccg aaccgtggtt
    12541 aatcaaatgg ttaggaagtg cattcatacc cgctgtcgaa actggcatca tcgccattga
    12601 aatcccgaag aacctcacag cataaaatac aacaatatac caaagcggcg tatccatcgt
    12661 taagaacata aatggaattg taccgatagt caaaatggta accccggtaa tcgtcaacca
    12721 tttcgcccca attttatcga aaataatacc cgtaattgga ctcattatcc ccataataat
    12781 cgcacccgga agtaataaca gacctgattg aagcgccgac tccccgcgaa ttgtttgaat
    12841 atataaaggc aatacaattt ccgcaccaat cattgccatc gttacaatcg aaccaagaat
    12901 aacagacaat gaaaatactg gatatttaaa cacatgtagt tcaagcattg gattatcaat
    12961 aactagttgg cgccaaacaa ataatgcaat aacaacgaca ccaacaatca acatcgtgat
    13021 aaccgttgca tctccccaac catcattacc tgctgaacta aatccataaa ggagtgaacc
    13081 aaaaccaatt gaagacatta caatggaaag aaaatcgatt tttgtatcag ttaattttac
    13141 tacttttttc attccaaaga acgctagaat tatatcgata accgcgattg gaattaaaat
    13201 aaggaataat acgcgccaat catacgaatc cacaatccaa ccagacaaag ttggcccaat
    13261 tgctggagca aacgcaataa caagtcccat cagccccatc gctgccccac gtttttcacg
    13321 agggaaaatc agcaagaaga ttgtttgaag caacggcatc ataatccccg caccagctgc
    13381 ttgaacgata cgaccagtaa gtagtaccgg gaaagaaccc gccactgacg caataatggt
    13441 accaattgta aatactgtca tcgctgtaat aaataaagtt tttgaactaa ttttttcaat
    13501 taaaagtgcc gtaatcggaa tcataatccc atttgttagc aagaaagccg tcgtcaacca
    13561 ttgccctgtt gctgctgtaa tatgcaaatc atccataatc atcggcagtg ccgtcgctag
    13621 taacgtctga ttcaagatcg ccacaaacgc cccaataatc attgtaacta ctaataaact
    13681 tctactataa gatttcccgt taacatcaac gggccgttct actgctgtac tattcaaaat
    13741 taatacccct tcccatgtgg aaatttccag atgaataata gaagtataat aaaaaaagac
    13801 caacaagtca acaaaaagtg actggtcagt ctaattatta taaaagcccg ttcacacaag
    13861 cttctaattt atttacctct ttggtcaaac ttgctggtac atgttgttta agatacaaca
    13921 atgttccttg aaccatgaaa tctctaggcg cctcattatt gttaatctcc ccaacaagcg
    13981 cgttcatgga ttccttatac tgccatttat ccgagtcatc aatatccgca ttttcaatcc
    14041 cgacatttaa ctcctccagc gcgccccgca gtttagctag tcttttcttt ctaatcatag
    14101 tttgatccgg caccagattt tctgtgtccg cttccgtaaa cacaatctct ccgctctcca
    14161 aaatatcctt cacaagtgca tcaagccttc tcaccacata aggaatagcc cgctcaatca
    14221 atcctgaatc aacattcttg ctaccactag caaagacata cattgccgcc atcccgctaa
    14281 gcaacatcgt aatatcattt atataaggct ccgtttcctt cccataaacc tctaacaact
    14341 gatttttaac ccattccata ttcttaagtc gcacattctg caagaacgca ttaaaatcat
    14401 catcaatcat cgtctgagaa aacgtaatat tcaagatctc cccattttcc gtataaaaat
    14461 gaataataat tttcaagcac tccgtaaaat tatccttctt cgtcccatct agccccatcg
    14521 tatactccaa acgctgatgc aatacagaat actcctgctt aaaaatcaca attgccagtt
    14581 cctctttcga agtaaaataa ttataaaaag tccctttaga aatcccagct gcatcaacca
    14641 tatcttgtac agacgtcttc aaataccctt gtttttgaaa cacctcttta gccgacttaa
    14701 taatccgctg cttcttctcc ttcaaaaaaa caccccaccc gttctgttat tatacccata
    14761 gtataatcga tttatactac ctattcaaga tatccataat aaatatcatt attcttttaa
    14821 acaataaaaa aagcctcgca tactagcgaa acatacaaat tatccatata ttatttaagc
    14881 cacttgtcgg atttgaaccg acgacccctt ccttaccatg gaagtgctct accaactgag
    14941 ctaaagcggc agcaaagcct ttcaaataa
//
LOCUS       DASDYK010000062        14966 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.062, whole genome shotgun sequence.
ACCESSION   DASDYK010000062 DASDYK010000000
VERSION     DASDYK010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14966
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.062"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..967)
                     /locus_tag="U0308_001846"
     CDS             complement(<1..967)
                     /locus_tag="U0308_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316808.1"
                     /translation="MIGKVKSISMWLWHHLTPQIFAVICVFIITLIALFVPPYIGMAD
                     NGDFFRIFSSNGLFVNNTNYDALQFGHFVKEFGIYQYFNENQVAIYSSQSIFIQMALL
                     LNKLFWSTTVFDVRFLGGLQLALLLPAIYLLVAGLTAKMKGWPGYVVAALTVFIFADT
                     AYTAYFNSFFSEGLILIMMLYISAGFLLLYQHKYNDYAMLGLIFVASLILITAKQQNA
                     PIAVVIAVCGILVFFIRKNRAFRISAAATFFVIFLSGVVMYAFIPGEFVTINQYQTMT
                     RGVLLDSENPEKSLEEMGMNSEFALLKGTNFYQKYKMIDLDSKLME"
     gene            1197..1937
                     /locus_tag="U0308_001847"
     CDS             1197..1937
                     /locus_tag="U0308_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2316809.1"
                     /translation="MQIKELAELTGVSVRTLHHYDKIGLLVPQKDDWNGYRIYSENDV
                     DKLQQILFFKELDFPLKKIKQILDDPFFDKNVALDLQRHLLIEKKQRIETMLATLDQT
                     IRNEKGEITMTNKEKFTGFDFSTNPYEEEAKKRWGDKVVEKANEKVNNMSEKEKLTLK
                     ESFDAEFRHLASVRELAPESEEAQLAIDHFFHYLNDTHGNIYSLEAFAGLGEMYVADE
                     RFTKNIDQFGDGLSHFLKEAMNIYAKTK"
     gene            2076..3737
                     /locus_tag="U0308_001848"
     CDS             2076..3737
                     /locus_tag="U0308_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEM2316810.1"
                     /translation="MFKHILLSLNGYKISYLRNDVISGVGVAALTIPVAMGYAQVAGL
                     PPIYGLYASFLPVIAYVIFASSPQLVFGIDATASAITGSIILGTAGLAAGSKEAIALA
                     PILAFFCAIFLVLFSVLKLGRFAKYISAPVLSGFISGLSVSIIMGQIPKIMGLKESGD
                     SFFSSLGIIFGQFFQSNWISFAMGVVTVIIVITCKKVIPKIPMSLVVLVLGTMAAYFF
                     KLDQYNVDIVGKIPVGFPSLALPDFGASSWALAIGGGLVCAIATFAGSLLPSESFAMR
                     NKYTIDDNRELFAYGISNFVAAFSGCSPASASVSRTAANEQFRGKTQMVSIVAATIIA
                     LIVAFLSGLLYYMPQPVLSGIVFAALVGIIDVDVLKGLFKVSRREATVWIVAALGTLL
                     VGVIFGVLLGIFLSFINVVSRSMKSPIAILGVIEGRHGYFDLKRKPEAKPIPNVVIYR
                     YSASLFFGNFNKFADGLKEAVQDDTKLVIFEASAIINIDTTATESMKDLLKWLDDKGI
                     EYYFADLIDHLKTSFRKHDLGYIIDNGYTKKTVEDALEAYYAEHK"
     gene            complement(3783..4226)
                     /locus_tag="U0308_001849"
     CDS             complement(3783..4226)
                     /locus_tag="U0308_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316811.1"
                     /translation="MYSNRKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFLIILK
                     AFVPFLFIGFLLDFFVVGKIVYRLHALLVSEDASKFKKIIMMQLLMVTFMCVLMSTLS
                     LIVNQGEWSHLGILILRNYFVALFLQIFIVSPFVRLISPRIFALL"
     gene            complement(4333..5085)
                     /locus_tag="U0308_001850"
     CDS             complement(4333..5085)
                     /locus_tag="U0308_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2316812.1"
                     /translation="MLFLDKNLELNDTELDIYNYIVANLDKVVYMRIRDLATEAHVST
                     TTILRFCRKFGCNGFSEFRVKLQLYLEEQKLAQIDMADETTYIDFLKRTAQPEFKAQI
                     QNAVEILRDRELVLFAGVGSSGVIAEYGAIYFSSLFTLALHIEDPLNHPFYHLSSKLS
                     DKICMIAISVEGENEDIIRYIHQLKAQNCKVISITNSAKSTIARLSDANIAYYINKEM
                     YQEANITSQLPALYTIENIAREIRTQIDKEKM"
     gene            5287..6603
                     /locus_tag="U0308_001851"
     CDS             5287..6603
                     /locus_tag="U0308_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEM2316813.1"
                     /translation="MTKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAG
                     REKLEIVGNLAKRMVEKAGVDMEVHLTLDREEALKDADFVTTQLRVGLLDARVKDERI
                     PNSYGVVGQETNGPGGMFKGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVL
                     RYSNQKKVVGLCNGPIGIERNIAETLGVDVSEIYVEFVGLNHMVFAKTVYHNGKDVTK
                     DVVFKMTEDEAGSSLKNINATGWDKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAE
                     HGTRAEVVKKVEAELFELYKQEELAEKPKQLEQRGGAYYSEAACNLINSIYNDKRDIQ
                     IVNTRNNGAILDIDPDSAVETNCVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAE
                     AAVTGDYDKALLAMTINPLTPSESVAREMLDELLEAHKEYLPNFFK"
     gene            complement(6636..7640)
                     /locus_tag="U0308_001852"
     CDS             complement(6636..7640)
                     /locus_tag="U0308_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family transcriptional regulator"
                     /protein_id="HEM2316814.1"
                     /translation="MAIPRDLKELNKKNIKSILRQQGAMTKAEIAEVTGLSVVTVNKL
                     IRDLVENEEILEQDNSVATGGRRAVSYEINPNFQQVLVISLQEKWKKITYSFSVYNLL
                     GEPEFVEDMSGEDLDITALKRNTKDLVCAFPKISCVVIGVPGIEIGGKLRAMDFPLLL
                     NVQLRETLEAEVNLPVLVETDTNAAILGYKNRPVKEENIVGLYYPERFPPGAGLLMNG
                     EILKGQNGLAGEIKHMPLQVDWDNFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNF
                     YFGQKDFTEELTEELKQVYPYAVLPEIVLSRKFTTDYRIGLLAFGIDYLENNMTDWRI
                     "
     gene            complement(7771..9186)
                     /locus_tag="U0308_001853"
     CDS             complement(7771..9186)
                     /locus_tag="U0308_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter"
                     /protein_id="HEM2316815.1"
                     /translation="MQQEATGGQKIRPIPIIASFLMAGFIGLFSETALNMALSDLIQV
                     FDISSATVQWLTTGYLLTLGILVPISGLLLQWFTTRGLFFTAVSFSIAGTLIAALSPT
                     FAMLMIGRVVQAVGTALLLPLMFNTILLIFPEHKRGSAMGMIGLVIMFAPAVGPTISG
                     LILENLTWNWIFWISLPFLIIALLFGMKFMQNVSVVTKPKIDILSIILSTLGFGGVVF
                     AFSSAGESGWGSATVLVSIIVGGLALGLFVWRQLTMEKPLMDLKVFKYPMFTLGLILV
                     FISFMMILSTMILLPLYLQNSLALAAFSAGLVLLPGGVLNGLMSPFTGRLFDAYGPRA
                     LVIPGFIVAVVALFFLTRIEVGTSALTIIVLHSVLMIGISMVMMPAQTNGLNQLPPKL
                     YPDGTAIMNTLQQVSGAIGTAVAITIMSAGQKAYMETAQGVGPEQMVASLTAGIQNAF
                     VFGLIMACIGLLCSLFIRKAK"
     gene            9333..9701
                     /locus_tag="U0308_001854"
     CDS             9333..9701
                     /locus_tag="U0308_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEM2316816.1"
                     /translation="MAILAFILTFIVMIEHIYIMILEMFFANTKLAAKTFGVEKELLA
                     NKKVQTLFANQGLYNGFLAAGLVWGLFFAGAGFAETVQIFFLSCVVVAALFGGATSSK
                     GILVKQGLPAVLALVAVLLV"
     gene            9982..10797
                     /locus_tag="U0308_001855"
     CDS             9982..10797
                     /locus_tag="U0308_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM2316817.1"
                     /translation="MKKNIFKLMMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFY
                     VVRHGKTMLNTTDRVQGWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDSGRAIQTA
                     NLILKESDKSADKEVQTDPRFREFNFGSYEGDLNENMWTDIAKSQGKTLEEWQKAGIS
                     PKDFADSVAALDKTRVKEGENWPAEDYATIQARLKEGLTDVAKKESKNGDSNVLLVSH
                     GLSIGALLDTIEPGYKLPAEGIKNASVTKITYKDGKFTIGDVNDLSYVEKGSK"
     gene            10918..12348
                     /locus_tag="U0308_001856"
     CDS             10918..12348
                     /locus_tag="U0308_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEM2316818.1"
                     /translation="MKRRTYVIITGLVLIFVAGAFWITNSTNQSDQKATQTEPLKKTS
                     PANVKTISSEAKKTLNSLASSGADKASISDLNQLIKELKSYPVEKNDSGAYLQNLTAC
                     LEAVKSYTTGKTDEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKG
                     VVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTVINAES
                     AFTNATKAENKKWRIKSDPAHVAFLPASGVEAANLANNHTMDYFQVGYDDTLKAFKEN
                     NIPVFNTDAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKENTLVIVNM
                     HWGVEYRETPTDYQSQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFG
                     ADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAK
                     KIVDELNRISKPIEGGVTEYTYFDPF"
     gene            complement(12395..12826)
                     /locus_tag="U0308_001857"
     CDS             complement(12395..12826)
                     /locus_tag="U0308_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEM2316819.1"
                     /translation="MEKYHRILVAVDGSEPAKLAFEKGLELALKLDGVLGIASIVDLR
                     AFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPA
                     EFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR"
     gene            complement(12927..14756)
                     /locus_tag="U0308_001858"
     CDS             complement(12927..14756)
                     /locus_tag="U0308_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0514 family class 1 internalin"
                     /protein_id="HEM2316820.1"
                     /translation="MKKALKLFLATICMFIMIYPSTAAHAEETNIVNIPDANLKTYLN
                     GLLKQASDAPITKTQMNTIQTVTLSGSTYTDLTGLEEAGNLVTLSLNNTNIQTLEPIK
                     NQTSLTYLTVGGDNVKDSLFVDLNGLVNLQSLSISGSEVTHNVFKTFNKLPKLTYLYA
                     QNSMKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRT
                     NPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVA
                     LPSARLSITDDGITVSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMNSYTISSGTY
                     DQYFDISHTLDLTADESFDYNQYDATSEEQFLKDVHAETDDGTAVKSDFDQVVKLDVP
                     GEYTVTLNAENAAGLKATSVTVKVTVHEKPVITADSQISYKKESTKSVDEFLQEIHSS
                     VTGNAVLTSDFDKVVDLNTPGEYTVTLNAINDRGQKADPVTVVVTVTTSDGGHVNPVP
                     PTPEVKPTPQEETDPTIIPEPQSENSEDPVKENNAKTEEKANKTSLTTKENKVEKADK
                     AEKTNQPKTKALPQTGDTNKSTLPIAGVMLSLAALLIFRKSKS"
BASE COUNT         4812 a         3054 c         2650 g         4450 t
ORIGIN      
        1 tttccatcag ttttgagtct aaatcaatca ttttatattt ttgataaaaa ttcgttcctt
       61 tgagtaaagc aaattcggaa ttcattccca tttcttcgag cgatttctcc ggattttctg
      121 aatcaagtag cacaccgcgc gtcattgttt ggtactgatt tatcgttaca aactccccag
      181 gaataaaggc gtacatcaca accccactca agaaaataac aaaaaaagta gccgctgctg
      241 aaatccgaaa tgcacgattt ttccggatga aaaacacgag tattccacaa accgcaataa
      301 caaccgcaat cggggcattt tgctgttttg ccgtaattaa aataagggat gccacaaaaa
      361 tcaaacctag catcgcataa tcattatatt tatgctgata taaaagcaaa aatcccgccg
      421 aaatatacag catcataatc aaaataagcc cttcactgaa aaaggaatta aagtaagcag
      481 tataagccgt atctgcgaaa ataaataccg tcagcgccgc aaccacataa cccggccagc
      541 ctttcatttt tgccgttaat cccgccacta acaaataaat cgccggcaaa agaagcgcta
      601 attgcaagcc acctaaaaaa cgcacatcaa aaaccgttgt tgaccaaaaa agcttattta
      661 aaagaagcgc catttgaata aaaatacttt gcgaagagta gatagctact tggttttcat
      721 taaagtactg ataaatccca aactccttca caaaatgccc aaattgcagc gcgtcataat
      781 tcgtattatt gacaaataaa ccattactcg agaagattcg gaaaaagtct ccattatcag
      841 ccataccaat atacggtggc acaaaaagcg ctatgagcgt aataataaaa acacaaataa
      901 ccgcaaatat ttgcggtgtt aaatggtgcc atagccacat actaatggat ttaactttcc
      961 ctatcatgat gctatcccct tcttatttac gatagaccaa tgtcacaaaa tagacacatt
     1021 tacatttcat tatacgagaa tgcccacttt ttttccatgc ttttattcat tttttttaaa
     1081 gaagttgact acaactaatt ttcttttcca ctaaaaaggt tataataaac acaaattcaa
     1141 gcttgactat cacgcgacgt catactttat agtaaaagca gaaggaggaa tcactcatgc
     1201 aaataaaaga attagctgaa ctcactggtg taagtgtgcg cacactccac cactacgata
     1261 aaataggcct acttgtcccg caaaaagatg actggaatgg ctatcgtatt tattcagaaa
     1321 acgatgtcga caaattacaa caaattcttt tctttaaaga actcgatttc cctttgaaaa
     1381 aaataaaaca aattcttgat gatccttttt tcgataaaaa tgttgcttta gatttgcagc
     1441 gtcacttact aatagaaaaa aagcagcgca ttgaaaccat gctagcaacc ctcgaccaga
     1501 ccatcaggaa tgaaaaagga gaaataacaa tgacaaacaa agaaaaattc actggttttg
     1561 atttttccac caatccatac gaagaagaag caaaaaaacg ttggggcgat aaagtagtag
     1621 aaaaagccaa tgaaaaagta aataatatga gcgaaaaaga aaaattaact ttaaaagaaa
     1681 gtttcgacgc agaatttcgt catttagcat ctgttcgaga acttgctcca gagtcagaag
     1741 aagcccaact cgctattgac cattttttcc attacttgaa tgacacccac ggcaatattt
     1801 attccctaga agccttcgct ggtcttgggg aaatgtacgt tgctgatgag cgcttcacta
     1861 aaaatatcga tcagttcggt gatggccttt ctcacttcct caaagaagcc atgaatattt
     1921 atgccaaaac caaataaaaa aagccacgat ttcttaaaaa gagatcgtgg ttttatgatt
     1981 ggtataacaa agaacggggt aaatagtata agatttcatt aatatgtatc tatgatgtaa
     2041 aataaagaat aaaatacatt tcaagggagg aacttatgtt taaacacatc ttgctttcac
     2101 taaatgggta caaaatatcc tatttacgaa atgatgtcat ttcaggcgtt ggtgttgctg
     2161 cactgacgat tccagttgca atgggatatg cacaagtagc aggacttcca cccatttatg
     2221 gattatatgc atcattttta ccggttattg cgtatgttat ttttgccagt tcaccacaac
     2281 ttgttttcgg aattgatgca acggcaagtg ccatcacagg atccatcatt ttaggaacag
     2341 ctggacttgc tgccggatct aaagaagcta tcgcgctcgc cccaattctc gcattctttt
     2401 gtgcaatatt tttagttctt ttctccgtat taaaattagg acgtttcgca aaatacatat
     2461 cagccccggt tcttagtgga ttcatttccg gacttagtgt ctccatcatt atggggcaaa
     2521 ttcctaagat aatgggccta aaagaaagcg gagatagttt cttctctagt ctaggcatta
     2581 ttttcggaca gtttttccag tccaattgga tttcatttgc catgggcgtg gttacagtca
     2641 ttattgttat cacttgtaaa aaagttatac caaaaatccc tatgtctctt gtagttttag
     2701 tacttgggac aatggctgct tatttcttta aattagatca atataatgtt gatattgtag
     2761 gtaaaattcc agttggcttc ccttcactag cgctacccga ttttggtgca agttcgtggg
     2821 cactcgcgat tggcggcggt ttagtatgtg ccatcgcaac ttttgccggt tcgcttttac
     2881 caagtgaaag ttttgctatg aggaacaaat atacgattga tgataatcgt gagttatttg
     2941 cttatgggat ttctaatttc gtcgctgcgt tttctggttg ttccccagca agtgccagcg
     3001 tatccagaac tgctgctaac gaacaatttc gtggtaaaac gcaaatggtt tctatcgttg
     3061 ctgcgaccat tattgcgcta atcgttgcct tcttaagtgg cttactttac tatatgccgc
     3121 aaccagttct ttcaggtatc gtatttgctg cccttgtagg tattattgat gtagatgtgt
     3181 taaaaggttt attcaaagtt tctcgtcgtg aagcaactgt ttggattgtt gcagcacttg
     3241 gtaccctttt agttggcgtt attttcgggg tactacttgg gattttccta tcattcatta
     3301 acgtagtaag tcgttcgatg aaatcaccaa ttgccattct tggagtgatc gaaggacgcc
     3361 acggttattt cgatttaaaa cgtaaaccag aagcaaaacc aattccaaat gttgtcattt
     3421 atcgttatag cgcttctctt ttcttcggga atttcaacaa attcgcagac ggcttaaaag
     3481 aagcagttca agatgataca aaactagtca tttttgaagc gagtgcgatt attaacattg
     3541 atacaaccgc aaccgaatct atgaaagact tgctcaaatg gcttgatgac aaaggcattg
     3601 aatattactt tgctgaccta atcgaccatt tgaaaaccag ctttagaaaa catgatcttg
     3661 gctatattat cgataacggc tacacgaaga aaaccgtgga agacgcgctc gaggcttatt
     3721 atgccgaaca taaataacaa aacgcttagc cgggcctaaa ctcgactaag cgtttttcat
     3781 ttttacaaaa gcgcaaaaat ccgcggacta attaaccgca caaacggtga cacgataaaa
     3841 atttgcaaaa ataaagccac aaaataattg cgcaaaataa gaatacctag atgactccat
     3901 tcgccttggt tcacaatcag gctaagcgtc gacataagca cacacataaa tgtaaccatc
     3961 aacaattgca tcataatgat ctttttaaat ttcgaagcat cttcactaac caaaagggcg
     4021 tgtagacgat acacaatttt tccgacaaca aaaaagtcta ataaaaatcc aataaaaaga
     4081 aacgggacaa atgcttttaa aataatcaaa aaggaattcg cgccaatacc attttcaaga
     4141 aagatattat aagagctcat gcataaaatc atcaaagaac acataataag tgtaaaaacg
     4201 accttctctt tcctattact gtacataatt tcacctccaa agaactatcg tagcaaatta
     4261 aaaaattctt cgtaagtgac aattttgtta caaaaaaagt tttgctcgga aatccaagca
     4321 aaacgtagct ttttacattt tctctttatc aatttgcgtt cttatttccc gggcaatatt
     4381 ttcaattgta tatagcgccg gtagttggga cgtgatattc gcttcctggt acatttcctt
     4441 attaatataa taagcgatgt tcgcgtcaga tagccttgca attgttgatt tcgcgctatt
     4501 cgtaatcgaa attactttac aattttgcgc tttcagttgg tgaatgtagc gaatgatgtc
     4561 ttcattttcc ccttccaccg aaatcgcaat catacagatt ttatcggata atttgctcga
     4621 taaatggtaa aacgggtggt taagcggatc ttcaatatgt agcgccagcg taaataatga
     4681 cgaaaaataa atcgcgccat attcagcaat tacacccgat gaacccaccc cagcaaataa
     4741 aaccagttcg cgatcacgaa gaatctcgac cgcgttttga atttgcgctt taaactcagg
     4801 ttgcgccgtc cgttttagaa aatcaatata agtcgtttca tccgccatat caatttgcgc
     4861 caacttctgc tcttccaaat aaagctgtaa tttcacccga aactccgaaa aaccattaca
     4921 accaaatttt cggcaaaaac gtagaattgt cgtcgtactc acatgcgctt ccgtcgccaa
     4981 atcgcgaatc cgcatataaa caactttatc taaattcgcc acaatataat tataaatatc
     5041 taattccgta tcatttaatt ccaaattttt atccaaaaaa agcattttcg cacctctttt
     5101 cgctttattt taccatgtaa cacctcgtta ctcaaatgtg acaagttcct acttagaaaa
     5161 tccttaccta aacctcgtca aatactagct attttttcat aaaattccta tactataact
     5221 gtgagaagaa aaggtgatac caaataagta agccttttca aaaaaatatc cttggaggta
     5281 taaataatga ctaaaggtat taaaatcgca actattggtg gcggatcaag ttatacacct
     5341 gaactaatcg aaggatttat taaacgtcaa gacgaattac cagttcgtga actatggtta
     5401 gtcgacgtag aagctggccg tgaaaaatta gaaatcgttg gtaatttagc aaaacgtatg
     5461 gtagaaaaag ctggcgttga catggaagta catttaacac tagaccgtga agaagcttta
     5521 aaagatgctg atttcgtaac aacacaatta cgtgtaggtt tactagatgc acgtgtgaaa
     5581 gatgagcgca tcccgaattc atatggcgtt gttggtcaag aaacaaacgg accaggcggc
     5641 atgttcaaag gacttcgcac aatcccagtt attttagata tttgtaaaga catggaacgc
     5701 ctttgcccag atgcttggtt aatcaacttt gctaaccctg caggaatggt aacagaagca
     5761 gttcttcgtt acagtaacca aaagaaagtt gttggcttat gtaatggccc tatcggcatc
     5821 gaacgcaata tcgctgaaac tcttggcgta gacgtttctg aaatttacgt agaattcgtt
     5881 ggtctaaatc acatggtatt cgcgaaaact gtttatcata atggcaaaga cgtaacaaaa
     5941 gatgttgttt tcaaaatgac agaagatgaa gctggctcaa gccttaaaaa tatcaatgca
     6001 actggttggg acaaaacgtt cttacgtaca ctaaacatga ttccaatcga ctacttgcgc
     6061 tactactggc aaacaaaaca acaactagaa gaccaagctc gcgcatacgc agaacatggt
     6121 actcgtgcag aagttgttaa aaaagtagaa gccgaacttt tcgagcttta caaacaagaa
     6181 gaacttgctg aaaaaccaaa acaattagaa caacgcggcg gcgcttacta cagcgaagca
     6241 gcatgtaacc taattaactc tatctacaac gacaaacgcg acattcaaat cgttaatact
     6301 cgtaacaatg gtgccatcct tgatatcgac cctgattccg cagtagaaac aaactgtgtt
     6361 atcactcgcc aaggcccaat tccactagca agcggacgtc ttccaatcgc tatcaacggc
     6421 atcatccaag aaatcaaaac tttcgagcgc ctaacagccg aagcagcagt tactggtgat
     6481 tacgacaaag cactacttgc aatgacaatc aacccactaa ctccaagcga atctgtagcc
     6541 cgcgaaatgc tggatgaact tttagaagcg cataaagagt atttaccgaa tttctttaaa
     6601 taagtaaaaa aagagcctgt caaagggctc tttttttata tccgccaatc cgtcatatta
     6661 ttctccaaat aatcaatccc aaacgccaaa agcccaatcc gataatccgt cgtaaactta
     6721 cgcgacaaca caatctccgg caaaaccgca tatggataaa cttgctttaa ctcttccgtc
     6781 agttcctcgg tgaaatcctt ctgcccaaaa taaaaatttg tatagagcac aatcgtttcc
     6841 ggatcataaa aactcatcgt tagcagcacc attttacgaa tgtgcgcttt aatttcatcg
     6901 acagaaaaat caaagttatc ccagtccact tgaagcggca tatgcttaat ctccccagcc
     6961 agcccatttt gacctttcaa aatctctccg ttcatcaaaa gccctgcacc cggtggaaaa
     7021 cgctccggat aataaagtcc aacgatattc tcctctttca ccggccgatt tttataccct
     7081 aaaattgccg cattcgtatc cgtctcaacc aacaccggta aattcacttc cgcctccaaa
     7141 gtctcacgca attgcacatt taaaagtagc ggaaagtcca tcgcacgtaa cttaccgcct
     7201 atttcaattc ccggcacccc gattacaaca caagaaatct tcggaaaagc gcaaacaaga
     7261 tctttcgtat tccgtttcag cgcagtaatg tccaaatcct ccccagacat atcctccaca
     7321 aactccggct caccaagcaa attatagacc gaaaaagaat aagtaatttt cttccacttt
     7381 tcttgcaaac taataaccaa cacctgctga aaattaggat taatttcata cgaaacagct
     7441 cttcttccgc cagtcgcaac cgaattatct tgttctaaaa tctcttcatt ttccactaaa
     7501 tcacgaatca gcttgttcac tgtaactaca cttagcccag tcacttcggc gatttccgct
     7561 ttcgtcatcg caccttgttg ccgtaaaatc gacttgatat ttttcttatt caattctttt
     7621 aaatcacgag gaattgccat catcaaccac tccattcgta aagttattaa acaaacttta
     7681 taaactatat ttactatcat tttaaccact cagaacccat ttgtcaaaac aaaaaagaac
     7741 ctctcattac gagaagttct cttcgcttta ttatttagct ttacgaataa ataacgagca
     7801 cagaagacca atacaagcca taatcagtcc aaagacaaag gcattttgaa ttcctgctgt
     7861 aagagaagca accatttgct ccggtcctac tccttgcgcc gtttccatat aagctttttg
     7921 tccagctgac atgatcgtaa tcgcaacagc cgttccaatc gcgccggaaa cttgttgcaa
     7981 cgtgttcata atcgccgtgc catcaggata taattttggt ggtaattggt ttaatccgtt
     8041 tgtttgtgcc ggcatcatga ccattgaaat cccaatcatt aacaccgaat gaagcacgat
     8101 gatggttaat gcagatgttc caacttctat tctcgttaag aaaaatagtg ccacaactgc
     8161 tacgataaac cctgggataa caagtgcgcg tggaccgtat gcatcgaaca aacgcccagt
     8221 aaatggtgac attaaaccat tcagcacccc acccggaagt aatactaatc ccgctgaaaa
     8281 tgctgcgagc gctaaactat tttgcaagta tagcggtagt aaaatcatcg ttgaaagaat
     8341 catcataaag ctgataaata ctaaaataag tcctaatgtg aacattgggt atttaaatac
     8401 tttcaagtcc atcaaaggtt tttccattgt tagttggcgc caaacaaaga gtccaagcgc
     8461 aagtccacca acgataattg aaactaatac cgttgcgctt ccccaaccac tttctcccgc
     8521 actactaaag gcaaatacaa ctccaccaaa acctagcgtc gaaagaataa tcgataaaat
     8581 atcaattttc ggcttcgtaa caaccgaaac attttgcata aatttcattc cgaataataa
     8641 cgcaataata aggaatggca aggaaatcca gaaaatccag ttccaagtta agttttctaa
     8701 aattagtcct gaaattgtcg gaccaactgc tggagcaaac ataattacca gcccgatcat
     8761 ccccattgct gagccacgtt tatgctctgg gaaaatcagt aaaatcgtgt taaacattaa
     8821 tggtagtaat agcgccgtac ctactgcttg cactacacgc ccaatcatta acattgcaaa
     8881 cgttggcgaa agcgccgcaa tcagcgtacc agcaatcgaa aaactcactg ctgtaaaaaa
     8941 taaacctcgt gttgtaaacc attgtaaaag taatcccgaa atcggtacta atattccaag
     9001 cgttagcaaa taacctgtcg taagccactg cactgtcgct gaactaatat caaacacctg
     9061 aatcaaatca ctaagcgcca tgttaagagc agtttcactg aatagcccaa tgaaccccgc
     9121 catcaaaaat gaggcaataa tcggtatcgg ccgaattttc tgcccacctg ttgcttcttg
     9181 ttgcatatag tttccccctt ttcagactaa aaattaagta gtctacgttt gatattacgg
     9241 agatttcgcc aataagtcaa cgtttcaagc tctattttta cgaaaaattt acaagctatg
     9301 ctatacttcg aagtagaaaa gagggatttt ttatggccat tttagcattt attttaacct
     9361 tcatcgtaat gatcgagcat atttatataa tgattttaga aatgtttttc gccaatacca
     9421 aactcgcagc caagacattt ggcgtggaga aggaattact tgcgaataaa aaagtacaga
     9481 cgctgtttgc gaatcaaggg ctttataatg gctttcttgc ggcagggctt gtgtggggat
     9541 tgtttttcgc gggagcagga tttgcggaga ctgtgcagat tttctttttg agttgtgtgg
     9601 ttgtggcggc gctgtttggc ggagcgactt cttctaaggg gattttggtg aaacagggct
     9661 tgccggcggt tttggcgttg gttgcggttt tgttggttta ggtgttgcag gaaaaggctt
     9721 ggattaaatc tgagcctttt tataatggaa attgaattag cgtttcaaac aaataattta
     9781 cttatttttc caatttttat caaaaacaga cttgtaaacg ctttccatcc atgctaaaat
     9841 cgtcctataa acaaatatcc ttattcagga atgttaccaa cttgggcata acctagataa
     9901 atggagaatt ggctttttgg gctagttttc gatttatcta ggtttttatt ttgctaaata
     9961 ctaacaaaaa aggagaacaa gatgaagaaa aatattttta aattgatgat ggcgttatgc
    10021 gcagtactat taattgcagg ttgcggtaac agtacatctg cagacaagaa agagacaaaa
    10081 gaaactaaag aagatggcac tgtgacattt tatgtagtac gtcatggtaa aacaatgcta
    10141 aacacaactg accgtgtaca aggttggtct gatgcggttc ttactcccgc tggtgaagaa
    10201 gtagttaaaa gcgctggtaa aggcttaaaa gacgttgatt tctctgcagc ttacagcagc
    10261 gacagtggtc gtgctatcca aactgcaaac ttaattttga aagaaagcga taaatccgct
    10321 gataaagaag tacaaactga tccacgtttc cgtgaattca attttggttc ttatgaaggc
    10381 gatttaaatg aaaatatgtg gactgatatt gcgaaaagcc aaggtaaaac tttagaagag
    10441 tggcaaaaag ctggtatctc gccaaaagat tttgctgata gtgtagcagc tcttgataaa
    10501 actcgtgtga aagaaggcga aaactggcct gctgaagact atgcaactat ccaagctcgt
    10561 ctaaaagaag gtttaacaga tgttgctaaa aaagaaagca aaaatggcga tagcaatgta
    10621 ttactagttt cccacggact aagcatcggt gcgcttcttg atactatcga accaggatac
    10681 aaactgcctg cagaaggtat caaaaatgca agtgtaacaa aaatcactta caaagatggt
    10741 aaattcacta ttggtgatgt aaatgactta agctatgtgg aaaaaggttc taaataaata
    10801 gccagacaaa aagcccaaaa caatttattt tgggcttttg ttttactaaa tatagacttg
    10861 tgtttcttcc ttacaattac tatacttaga aaaaaaggaa ctacggagga tatctagttg
    10921 aagagacgta cctatgttat tattactggt ttagtactta tttttgtcgc tggtgctttt
    10981 tggattacaa attctactaa tcaatctgac caaaaagcca ctcaaaccga gccactaaaa
    11041 aaaacaagtc cagctaatgt taaaaccatt tcatcagaag ctaagaaaac cttgaattcc
    11101 ctagcaagtt caggagctga caaagcttct atttccgatt taaatcaatt aattaaagaa
    11161 ctaaaatcct atccagttga aaaaaatgat tctggcgcct atctccaaaa tctcacagcc
    11221 tgtttagaag ctgtaaaatc gtatacgacc ggcaaaacag atgaaaaaac gcttgggaaa
    11281 gtatatcctg cttttcttgc aagtgaacaa aaactatcag ccatcgaaaa aacaaatcaa
    11341 tatgattggt tttatgccgc agccgcaacc aatcaacaag gtttgaaaga aaaaggtgtt
    11401 gtcactttga ccatggttgg cgataattca tttggaacct atcctgaaac gcccgaacac
    11461 ctcaaattcg ataacgtatt ccaaaaaaac aacggcaata atacctatgt ttataaaaac
    11521 tgccttcctt ggtttaaatc tgatgactac actgtcatta acgctgaaag tgcctttacg
    11581 aatgcaacaa aagcagaaaa taaaaaatgg cgcatcaaaa gtgaccctgc acacgtcgcc
    11641 tttttaccag cgagcggtgt agaagcagca aatttggcca ataaccatac aatggattac
    11701 ttccaagttg gttacgatga cacattaaag gcttttaaag agaataatat tcctgttttc
    11761 aataccgacg ctccacttga aacaaccatt aaagggatga aaactgttct actaggctac
    11821 gattgccgta tgagtcagca atctcctgct tatcttgaaa gaattgtaaa agacgtgaag
    11881 aaatacaaaa aagaaaatac tctcgttatc gttaatatgc actggggcgt cgaatatcgc
    11941 gaaacaccaa cggattatca aagccaattt ggtcatgcga ttttagatgc tggtgctgat
    12001 ataattatgg gctctcaccc tcatcgccta gaaagcgttg aaaaatataa agataaatac
    12061 atcgtttata gcatgggcga ctttgctttt ggagctgatc ctacgctact ttcccgtatg
    12121 acatcgatgt tccaactgcg ctttacgaag gaagataata aaatcgttct aaaagatatt
    12181 tctatcgttc caacttatga aaattcagat ggtagtacga cagaaaacaa ttatcaaccg
    12241 ctccctgtgt ttggtgatga tgctaaaaaa atcgtcgatg aacttaaccg tattagtaaa
    12301 cctatcgagg gcggcgtaac agaatacact tacttcgatc cgttttgata ataaaaagcg
    12361 tagatatctt ctaacaaaga tatctacgct ttttttatct agctattaaa gtatcgcaaa
    12421 ttgcatgagc cataatataa gaagaaacac taccaagaac tagcttttct actcggttca
    12481 tcccagtcgc tccgcaaata attaaatctg cttggaactc tgctggaatg tctgtggaaa
    12541 gtaagatttt cggattacct ttagcaacaa aagtttctac ttgtttcact cctgccgttc
    12601 tagctttttc tgcgtattca ttaacgctcg tttttaattc tagttcggct ttttcttcta
    12661 agctgccatc ataagaaaca ttcggggaaa aggcacgtaa atcgacaata ctagcaattc
    12721 caagcacacc gtctaatttt agcgctagtt ccagtccttt ttcaaaggct aattttgctg
    12781 gttcagaacc atccactgct acaagaatgc gatgatattt ttccatcata taaaacctcc
    12841 tacaactttt cttatagtat tccataccct ataaaaatga ttttaggcct gccattcatt
    12901 ctttttgcta atgaattcac aataacttaa gatttgcttt ttctgaaaat cagcagtgcc
    12961 gctaaactca gcattactcc tgcgattggt aaggtgctct tattagtatc accagtttgt
    13021 ggcaaagctt ttgttttcgg ttgatttgtt ttttctgctt tatctgcttt ttctactttg
    13081 ttttctttcg ttgttaaaga agttttattt gctttttctt ctgtttttgc attattttct
    13141 ttcactgggt cttctgaatt ttcgctttga ggttctggga tgattgttgg gtcggtttct
    13201 tcttgaggtg tgggttttac ttctggtgtt ggtggaaccg gattaacatg tccgccgtcg
    13261 ctagtagtca cagtcacaac tacggttaca gggtcagctt tttggccgcg atcatttatt
    13321 gcatttaaag ttacggtgta ttcgcctggg gtgtttaaat ctactacttt atcaaaatca
    13381 ctggttaaaa ctgcatttcc agttaccgaa ctatggattt cttgcaaaaa ttcgtcgact
    13441 gatttagttg attctttttt ataagaaatt tgggaatcgg ctgtaataac tggtttttca
    13501 tgaacggtta ctttaactgt tacggaagtt gcttttagtc ctgcagcgtt ttccgcattt
    13561 aatgtcacgg tatattcacc cggtacatca agcttaacta cttgatcaaa atcgctcttt
    13621 actgctgtgc catcatctgt ttcagcatgt acatctttta aaaattgttc ttctgatgtt
    13681 gcatcgtatt gattatagtc aaaactttca tccgccgtta aatctagcgt gtggctaata
    13741 tcaaaatatt gatcatatgt cccgctggaa atggtataag aattcatgct tggtggtgtc
    13801 gggtaacttc cagtcggaaa atcatagcgt gcattatatt caatttcatc aagattgtcg
    13861 aattcttctt ttgttacacc gctgactgta ataccatcat cggtaatgga tagacgtgcg
    13921 cttgggagtg ccacatcatt aaatcctaaa taagtattac ttgcggaagt cgatttagaa
    13981 aatggtgcaa cagtgccatc aaaactcgtt aaaggttttg gcatcatcga aaatggtaaa
    14041 tataacgttt ggtttgtttc attataatct aacttaccag atttaagtgt aattcttgga
    14101 ttcgtgcgcc ctgtattttg cccaaaagca gcaagagctt tcaagttgcc atttttaaaa
    14161 ctttcaaagt catttaaagg tctaaaatca tcaatgccat caaattgtaa gaatagtgtc
    14221 gttaaggctg gtaaggaagc aagcgcagaa atatctgtga ttttcatgga gttttgcgca
    14281 taaagataag ttaactttgg caacttattg aaagtcttaa agacattatg tgtcacttcg
    14341 cttccgctga tactaagact ttgtaaatta acaagtccat ttaaatctac gaaaagacta
    14401 tcttttacat tgtctccgcc cactgttaag taagtcaaag aagtttggtt tttaatcggt
    14461 tcaagtgttt ggatgttagt attgttaaga gatagtgtta ccagatttcc agcttcctcc
    14521 aaacccgtca agtctgtata agtgctgcca gaaagtgtaa cggtttggat agtgttcatt
    14581 tgtgttttag taattggtgc atcacttgct tgcttgagca gaccattaag ataggtttta
    14641 agatttgcat caggaatatt aacaatattc gtttcttctg cgtgagctgc tgtggaagga
    14701 tatatcatta tgaacataca aatcgtcgca agaaatagtt tcagtgcttt tttcatttat
    14761 actctcctta gtggttaatt tcttcccaaa gtataaccgc gttaaaacta actctcaata
    14821 cgttttcata aaatatttca cgtttgattt gccttaatat tcatattatt cactcttatt
    14881 tttataggaa tcgctttaaa taaacaatgg tagcgctttt ttgtctaaat aaaagaaatc
    14941 tgaaaattat atcaacgtaa catttt
//
LOCUS       DASDYK010000063        14827 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.063, whole genome shotgun sequence.
ACCESSION   DASDYK010000063 DASDYK010000000
VERSION     DASDYK010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14827
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.063"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..654
                     /locus_tag="U0308_001859"
     CDS             <1..654
                     /locus_tag="U0308_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEM2316821.1"
                     /translation="NKYKKLNSRKIIVKLKAMFGQTPEAEEKLRLMLSERMKKFLAEG
                     DSALPVEDGMEIDELAGDSKIAESRDIKKMIDDVFEMVANSFNIPLGLAKGDTVGLSE
                     QVNSFLMFSINPIAEMFTDEGNRKFYGRDSVLERTYMKLDTTRIKVQDIQEIASSMDV
                     LFHIGVNTIDDNLRMIGREPVMSPETQERFVTKNYAPLGENEEDLKGGDINENKGDS"
     gene            632..1378
                     /locus_tag="U0308_001860"
     CDS             632..1378
                     /locus_tag="U0308_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
                     /protein_id="HEM2316822.1"
                     /translation="MKIKEIPKIESRLEFKNSSENPEIADLYLYGSIGSGWFDDITSS
                     EVQNFLKTSSVSQINVHVNSGGGDVFESIAIHNLLKAHPAKISIYIDALAGSGASVIA
                     MAGDEIIMPSNAMMMIHKAWTIAAGNADEFRKVANDMDKIDHAVTESYTERFVGEREE
                     LVTLLTNEEWLTAEECVTLGFCDSIGEIELNEEEQVTENSNEAVTVASIVDKYKVVAS
                     TENKAIQTKNNIFKSIANRSDAFLLGGNDK"
     gene            1375..2547
                     /locus_tag="U0308_001861"
     CDS             1375..2547
                     /locus_tag="U0308_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HEM2316823.1"
                     /translation="MNNLDKKDSETLNISTAFLNAIKEGATEAEQVTAFTNMAEQIQN
                     NIIAQARKEVNREMNDNNVLASRGANALTSDESKYYNEVIAGNGFAGVTALLPPTVFE
                     RVFEDLTVEHPLLSKINFVNTTATTEWIISVGDVATAWWGPLCAEIKEVLDNGFDKIQ
                     TGMYKLSAYIPVCNAMLDLGPSWLDQYVRTILGEAMALGLEAGIVNGSGKDQPIGMMR
                     DLNNVTAGEHPVKTATPLTDLTPATLATKVMLPLTDNGKKSVSDAILVINPADYWSKI
                     YAATSYMTPQGVWVTGILPVPLEIVQSVAVPVGKAVAGRAKDYFMGIGSEQVIRTSTE
                     YRLLDDETLYYAKQYANGRPKDNSSFLVFDITGLEGSPAIDVNVVNNATPSETPAE"
     gene            2570..2689
                     /locus_tag="U0308_001862"
     CDS             2570..2689
                     /locus_tag="U0308_001862"
                     /inference="COORDINATES: protein motif:HMM:NF020688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316824.1"
                     /translation="MKVVELKEELDKRGITYNTSDLKSDLILKLEEDDLNAGV"
     gene            2676..2969
                     /locus_tag="U0308_001863"
     CDS             2676..2969
                     /locus_tag="U0308_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316825.1"
                     /translation="MQVSDELLQEVKDYLHITWSDETEDKRIRKIIERVSARISQLTG
                     VSFTFEKEDAAKQLLFDGVRYVNNNSYEYFQQNFICEIQSLQFDVAVNINAEG"
     gene            2956..3294
                     /locus_tag="U0308_001864"
     CDS             2956..3294
                     /locus_tag="U0308_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="HEM2316826.1"
                     /translation="MQKVNHDTFNDGVLFYGISETLRDSNRKRIGTNFVSKGKLFYEE
                     VSMRDQDVMRINAMGKDLNLKIKTHYRKEATSYQKIQIEGVQYEVSYIDKDRNVRLFW
                     YLTRSGDENE"
     gene            3287..3697
                     /locus_tag="U0308_001865"
     CDS             3287..3697
                     /locus_tag="U0308_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316827.1"
                     /translation="MNEATKERITKLNEYLITKLSENTGLNVYQDNVSETELNEEMNG
                     VYDYIIFSTGGFSKSDTSQFTLIQEVTVQVATENTSDLDGLQIDIITSLEGTGGAGPY
                     YFLNSTKGQVQKGQQDGYVDALELIFTRSFKYVC"
     gene            3687..4109
                     /locus_tag="U0308_001866"
     CDS             3687..4109
                     /locus_tag="U0308_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316828.1"
                     /translation="MCAKWSLEFSDVERLSNLISQIPNKSEAIINKTLETKAVPLVKL
                     NIEKRINLSKNWKGQLLNKNHAQSSGPFNVKMGNLGFELLTKPKFNYLIFPDQGIGKH
                     NKTKQDFMQLGVEESSQEIVEMLEQAVFKEINDTLGGK"
     gene            4111..4689
                     /locus_tag="U0308_001867"
     CDS             4111..4689
                     /locus_tag="U0308_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM2316829.1"
                     /translation="MATIVEDFDATRVTNVGTKFTGDTASIAFGCLGSIEGETELLEL
                     VKKCEGVETKKKTTPQKMTLTLTGHVKVDVLRDIFGLSNEGLKVGVYSYGADSLSKPF
                     ILTADVLDEFEAQTKLIAFSNCVAATGLKVTVENGADEVAEIELEFTAMIDDNRKCYY
                     EAIVSELDATGRDAFVKQWHTNFTPEMVVATP"
     gene            4810..5172
                     /locus_tag="U0308_001868"
     CDS             4810..5172
                     /locus_tag="U0308_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_038330192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316830.1"
                     /translation="MEFTIDFLDGTKAQLDSNVTMLTLYRLQNEGEGAVDGKFLKGFM
                     QKEADLDPISIAQAMYAAYRQATDKKKAKNFEEFMENYQMDLEIDMQIYFAIVTKRAR
                     DEFAKQFKKKTGSSKGKK"
     gene            5355..8435
                     /locus_tag="U0308_001869"
     CDS             5355..8435
                     /locus_tag="U0308_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HEM2316831.1"
                     /translation="MANNQAKVTFKVFNQDFNRAMAEMNADSKKLRQELKLEQEQLKN
                     TGSETDKLAADLNGLQKQYDVASQKTKETAQQLEKVKTKFGENSTEASRMESALKSAQ
                     ITEQQLANKIELTTDALEKAKSAETGRVASLNKLQSEQSNLEAQSEKLASEYKLESAA
                     MEGTATEAEKLARAEKYLADQTNVAEQKIKNMEQQLELVKQEYGENSTEALKMETSLN
                     EAKMSVSKLGNELTEFKNDSNNAGQGMDELNNKMSGAVMMEAAEHIAAVGEKLKEIGQ
                     YALEAFREVDEGLDTIITKTGATGKAGEDLSNVFDNIAGNSKFEFQQIGDAVGELNTQ
                     FGFTGKELEKNSMKLLKFSDINGSDVTNSTMKAKQALEAYGLENKDLSMVLDSVTYVA
                     QGTGQSVDDIFDKAVKGAPQIEALGLSFADGAQLMGNLDKAGVDSSATLSSLTKASVV
                     YAKENKTLAQGLSELEGKISGAKTETEKINLAAEVFGSKGAPRMVKAIEDGRLSLDGL
                     AGTAEMASGTVSKIFEATLDPIDRQDVALNNVKMAMADLGNSIAEVLAPILDALSSVL
                     QKVSEWFNGLPAPVRQVTVVIGLLLIGFTALLPVITAIVAMIGILGTAMLGVVGIIAA
                     IVAGIAILVVGFKWLWDNCEGFRNFWIGLWEWIVAAFKAAWEYIQPGLQSIGDALKKF
                     WEEYGPTIIGALQAVWDFIVGFVAWLEPLWTFLWEGLKSTLKFAWDAILAIVQFALDY
                     LGGLIDFWAGIFTGDWDRVWKGIQEMTSAALEAIKGIFFALVRWIDNILKSLGIDMGA
                     IWKSITDATKTAWKWISDYIVNPIRDANNRAKLILAAFKAAFKITFDVIRDNIANTWS
                     KVEDKIIKPVKNAYDKVKNIVDDIKDTFKNLKIKFPKIEMPPMPHFSLKGKFSLKEMT
                     VPKLDVSWHKNGGFFNSASVIGIGEAGPEAAVPLVGKRMDPFADAVSNRMLSSLPSMA
                     QGKISENNNDVKVEINMNNNLYGAADEDRLVNKVKREITNSMNSKTTAWGGRTS"
     gene            8432..9139
                     /locus_tag="U0308_001870"
     CDS             8432..9139
                     /locus_tag="U0308_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HEM2316832.1"
                     /translation="MNYQIFIDDVSCNDYDLCVAERPLLKTPEQDVEIREIRGRNGAF
                     IIPFAYKNVEEEISFNFLDDSKSFKQLFREAKRYFMNGKNLVFSDDPHVYRKIVHVSF
                     SDAENTVLEYGFFNVIFTLDPFQYANTNIIEINKGDLLVNEGTIESQPYMKIYATGDV
                     TLNISGNTFVFKDIDEYIELDCENLMVYKTVNDVIATADNKMFTPDFPVLNVGENYFD
                     WIGNIEKIEVNPYWRYV"
     gene            9139..11265
                     /locus_tag="U0308_001871"
     CDS             9139..11265
                     /locus_tag="U0308_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM2316833.1"
                     /translation="MIPILYESKNTDFENNGLGLLKDIITATVDETLNGPCELTIEYP
                     VTARLFDKISDESIFKVKSNEVQNFQLFRAYNIVRDEFTSSIIVKAKHITNDATSNFV
                     EDFTVENITPGAALNKLFSSTAYPSKFSGTSDIATLSSTSIQRKNPLEIIAGVEGSLL
                     DTWGGELVRDNFSIKLLKRRGRDKVASIRYRKNLTGLETDVDTENVITRIYPFANKQD
                     SNGNEQTIVLPEKYIDSEHINAYSNVKILAVDYSSDDTVTDVTTLRNVAGKYFMNNKT
                     DIPEMNIKVSFEPLSEMTGYEKYKNLEAVELGDTVTVYHPDLNVNITAKAVRTKYNVI
                     TEKYEEIELGSIKADFTDTLKSDISKIIDEVPTQDWMQNELKAIGDSIQGANGGNIYT
                     FPTFKPSTMYFMDTDNVNTAKKVMVMNREGIAFYQNGITGIPKTAWGIDGKFVADWIG
                     TGTLRAIDIEGVSITGSSGFFDTLYSSFLPGLPAPQYKEELKMGGGVGFHLTAKSVTK
                     PYPALQMRMNTNGDLGLAIEAVNENTGAIDADRVVRLSPFAGIETPLIQSDGWCCIGA
                     NSDGKTASIDRHTWISGGGPQLRYVPHRASNFETASSEEYKKNIRKVKKTAFGKTAKQ
                     VINETDVFTYSHIADETNEKKIGFIAEQASDSLTTADGKAIDLYNSVAWLYQYAKENE
                     EEKEALKAEVKELKNLVNKLVNEVSK"
     gene            11262..12383
                     /locus_tag="U0308_001872"
     CDS             11262..12383
                     /locus_tag="U0308_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BppU family phage baseplate upper protein"
                     /protein_id="HEM2316834.1"
                     /translation="MTALRKINATLDLNRKSWNIERIEAVQGDIDSLMIAVQIVENGK
                     LKDLTDYKPTFAVVLPGTVKYVIDDLHFSNEKMNEGYFEYTFVKEAFSVPGVYDTARF
                     ILQNEDGTELSGMPRFTYYVEKDPLQGKVVAESYISDFERLEQMIHAVELEIAELHDE
                     VTSESVRLDSEIAALDEKINTETSKLQSEADDLQQQFDNLNPAQFAQKTVLDEHVNDA
                     DIHVTATDKTNWNAKETVEGAQAKADKALADAKAFFELSSSVQSVTLTPKNGFVASQP
                     LIARYIKFGNRFLVIVSGIVGKGTGSGTGICATLPTFLAPDASWNKLYSAAQQSTAAS
                     NQANIYLSVSADINIVGVGSVDVNTGLDGIIYLTKEVTT"
     gene            12380..12721
                     /locus_tag="U0308_001873"
     CDS             12380..12721
                     /locus_tag="U0308_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316835.1"
                     /translation="MSELIKVFKYDDNGVFERDDLIILKKGEKIPDGYTLIEPPVPAI
                     NPVFNTKKQKWSPGEEASIPEPPELTELEKLTQDYADLMLYVAEVEQKTEQTQQDNAN
                     LLLSLAEAGAL"
     gene            12721..12867
                     /locus_tag="U0308_001874"
     CDS             12721..12867
                     /locus_tag="U0308_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XkdX family protein"
                     /protein_id="HEM2316836.1"
                     /translation="MINWYEKVKDYFLGGYYTEADVNKFVTLKKITRSQADEIIAMKE
                     AKAE"
     gene            12904..13269
                     /locus_tag="U0308_001875"
     CDS             12904..13269
                     /locus_tag="U0308_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316837.1"
                     /translation="MYEGLTKVFDYALAKEMFFAALFVALFIILLIITKRIWDDSKIV
                     RVEMKEERDKMETEREKRDKESKEERDKFISTMNEQQRLMDKQNDMMGQQQQSIDSLS
                     KSVGKLAHKVDLLEHKITK"
     gene            13282..13563
                     /locus_tag="U0308_001876"
     CDS             13282..13563
                     /locus_tag="U0308_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HEM2316838.1"
                     /translation="MEFGKELLVYMTFLVVVTPVFVQAIKKTELIPSKWLPTVSIFVG
                     AILGALATFLDGSGSLATMIWAGALAGAGGTGLFEQFTNRAKKYGKDDK"
     gene            13563..14432
                     /locus_tag="U0308_001877"
     CDS             13563..14432
                     /locus_tag="U0308_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase family
                     protein"
                     /protein_id="HEM2316839.1"
                     /translation="MALTEAWLIEKANRKLNAGGMYKITSDKTRNVIKKMAKEGIYLC
                     VAQGYRSTAEQNALYAQGRTKPGAIVTNSKGGQSNHNYGVAVDLCLYTNDGKDVIWES
                     TTSRWKKVVAAMKAEGFKWGGDWKSFKDYPHFELCDAVSGEKIPTATQNTNTNSNRYE
                     GKVIDSAPLLPKMDFKSSPFRMYKVGTEFLVYDHNQYWYKTYIDDKLYYMYKSFCDVV
                     AKKDAKGRIKVRIKSAKDLRIPIWNNTKLNSGKIKWYAPNVKLAWYNYRRGYLELWYP
                     SDGWYYTANYFLK"
     gene            14556..>14827
                     /locus_tag="U0308_001878"
     CDS             14556..>14827
                     /locus_tag="U0308_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316840.1"
                     /translation="MFITIDVENILEKVGIGSTNPFKVKASDGKIYVIKIKNDACDGK
                     TLLNELIAYRLAKLLDLPISNCCLINLKKEHIEDNIFNMDGINCVEG"
BASE COUNT         5318 a         2112 c         3203 g         4194 t
ORIGIN      
        1 aataaatata aaaaattaaa ctctagaaaa ataatagtaa aactaaaagc gatgtttgga
       61 caaactccag aggcagaaga aaaattgaga cttatgctat ctgagagaat gaagaagttt
      121 ttagcagaag gtgactctgc tttacctgtc gaagatggaa tggaaataga cgaacttgcg
      181 ggagattcta aaatagcaga atcaagagat ataaaaaaaa tgattgatga tgtttttgaa
      241 atggttgcaa atagttttaa cattccactt ggtttagcaa aaggagacac agtgggctta
      301 agtgaacagg ttaattcatt cttaatgttt agtataaatc ctatcgctga gatgtttacc
      361 gatgaaggaa acagaaagtt ttatggtagg gattcggttt tagaaagaac ctatatgaaa
      421 ttagatacta caagaattaa ggttcaagat attcaagaaa ttgcgagttc aatggatgtg
      481 ctgttccata tcggtgtaaa tacaatagat gataatttaa gaatgattgg acgtgaacct
      541 gtgatgagtc cagaaactca agagcgtttt gttacaaaaa attatgcacc tttaggtgag
      601 aatgaagaag atttgaaagg gggtgacata aatgaaaata aaggagattc ctaaaataga
      661 aagtcgatta gagtttaaaa acagctctga aaacccagaa atcgcggact tgtatttata
      721 cggatcaata ggtagtggct ggtttgatga tattacgtct agtgaagtac agaatttttt
      781 aaaaacatct agcgtctctc aaataaatgt acatgtcaat agcggtggtg gagatgtttt
      841 tgaatccatt gctattcata atctattaaa agcacaccca gctaaaatca gtatttatat
      901 tgatgctctt gctggaagtg gtgcatctgt aattgcaatg gcaggtgatg aaattattat
      961 gccaagcaat gcaatgatga tgattcataa agcctggaca atagcagctg gtaatgcaga
     1021 tgaatttaga aaagttgcga atgacatgga caagattgac catgcagtga cggaaagtta
     1081 tacagaacgc tttgttgggg agcgtgaaga gttagtaaca ttacttacta acgaggaatg
     1141 gttaacagct gaagaatgtg tgacacttgg tttttgcgat tctattggtg aaattgaatt
     1201 aaatgaagag gaacaagtta ctgagaattc aaatgaagca gtaacagtag caagtatagt
     1261 tgataaatat aaagtagttg catcaactga aaacaaagca attcaaacaa aaaataatat
     1321 ttttaaaagt atcgcaaata gaagcgatgc ttttttatta ggaggaaatg acaaatgaat
     1381 aaccttgata aaaaagattc agaaacattg aacatcagca cagcattttt aaacgcaatt
     1441 aaagaaggcg cgacagaagc ggagcaagta acagcgttta caaacatggc tgaacaaatt
     1501 caaaacaata ttatcgctca agctcgtaaa gaagtaaata gagaaatgaa tgataataat
     1561 gtactcgcta gccgtggtgc caacgcttta acaagtgatg aaagcaaata ctataatgaa
     1621 gtcattgcag gaaacggttt tgctggagtt actgcattac ttccacctac cgtttttgag
     1681 cgtgtgtttg aagatttaac ggtggaacat cctctattaa gtaaaattaa ttttgttaat
     1741 actactgcaa caacggaatg gattattagt gttggtgatg tcgcaactgc ttggtggggt
     1801 cctttatgtg ccgagattaa agaagtttta gacaatggtt ttgataaaat tcaaactgga
     1861 atgtataaat tatctgctta tattccggtt tgtaatgcaa tgctcgattt aggaccgtcg
     1921 tggttagatc aatatgttcg tactatttta ggtgaagcaa tggcgcttgg tcttgaggct
     1981 ggtattgtta atggttccgg gaaagaccaa ccaatcggaa tgatgcgcga tttgaataat
     2041 gttacggctg gggaacaccc agttaaaacc gcaacacccc tgaccgattt gacaccagct
     2101 acactagcaa caaaagtaat gttacctctg acagacaacg gaaagaaatc tgtcagtgat
     2161 gcgattcttg ttataaatcc agctgattac tggagcaaaa tctatgcggc aactagttac
     2221 atgacgcccc aaggagtttg ggtgacaggt atcttaccag ttccacttga gattgttcaa
     2281 tcggttgcag tgcctgtcgg taaagcagta gccggtcgtg ctaaggatta ctttatggga
     2341 attggttcag agcaagttat tcgcacatca actgaatatc gtttattaga cgatgaaaca
     2401 ctctactatg ctaagcaata tgcgaatggt cgacctaaag acaattcttc tttcttagta
     2461 ttcgatatta caggtctaga aggttcgcct gctattgatg tgaatgtagt gaataacgcg
     2521 acaccctccg aaacccctgc tgaataaagc ggggaataac tattctacta tgaaagttgt
     2581 agagttaaaa gaagaactag ataagcgagg aatcacatat aacacttcgg atttaaaatc
     2641 tgacttaata ttaaagttag aggaggatga tttaaatgca ggtgtctgat gaattattac
     2701 aagaagtaaa agactacttg catattactt ggtctgatga aacagaagac aaacgtataa
     2761 gaaaaatcat tgaaagagta tcggcacgca ttagtcaact gactggcgtg tcttttactt
     2821 ttgaaaaaga agatgctgcg aaacaattgc ttttcgatgg tgtgagatat gtaaataata
     2881 attcttatga atactttcaa caaaacttta tttgtgaaat tcaaagcttg caatttgatg
     2941 tggcggtgaa tattaatgca gaaggttaat catgacactt ttaacgatgg tgtcttgttt
     3001 tatggaatat cggagacact tcgcgactct aacaggaaac gaataggaac aaattttgtc
     3061 agtaagggca agttgtttta tgaagaggta tctatgcgtg atcaagatgt tatgagaatc
     3121 aatgcaatgg gaaaagattt aaatttaaaa attaaaactc attatcgaaa agaggcaaca
     3181 tcttatcaaa aaatccaaat tgaaggtgtt caatatgaag taagttatat agataaagac
     3241 agaaatgtgc gtttattttg gtatttaact aggtcaggtg atgaaaatga atgaggcgac
     3301 aaaagagaga attacaaaat taaacgagta tttaatcacg aaacttagtg aaaacacagg
     3361 tttaaatgtt tatcaagata acgttagcga aacagaatta aatgaggaaa tgaatggtgt
     3421 ttacgattat atcatttttt ccactggtgg attttcaaaa agtgacacct cacaattcac
     3481 attgatacaa gaagtaacag ttcaagtagc aacagagaat actagtgatt tggatggatt
     3541 gcaaattgac ataattacta gtttagaagg aaccggtgga gctggtcctt attatttttt
     3601 gaactctact aaaggtcaag ttcaaaaggg gcaacaagat ggctatgtag acgcactgga
     3661 attaatcttt acaaggtcat ttaaatatgt gtgctaaatg gtctttagag ttttcggatg
     3721 ttgaaagatt gtcaaatttg attagtcaaa ttccaaacaa atctgaagct attattaata
     3781 aaacacttga gacaaaagca gttccacttg tgaagttaaa catagaaaaa agaataaatc
     3841 tttctaaaaa ttggaaaggt caattgctta ataaaaatca tgcgcaatcg tctggacctt
     3901 ttaatgtgaa aatgggaaat ttggggtttg aattattaac aaaacctaaa ttcaactatt
     3961 taatttttcc agatcaaggg attggaaaac acaataaaac aaaacaagac tttatgcaat
     4021 taggtgtaga agaatcatct caagaaatag tagagatgtt agaacaagca gtatttaaag
     4081 aaataaatga taccttagga ggtaaataaa atggcaacaa ttgttgaaga ttttgatgca
     4141 acaagagtaa caaatgtagg tacgaaattc actggtgata ctgcaagtat tgcatttggg
     4201 tgtctaggtt ctattgaagg tgaaacagag ttactcgaat tagtaaaaaa atgtgaaggt
     4261 gttgaaacga agaaaaaaac aacgccccaa aaaatgacac tgacgttgac aggtcatgta
     4321 aaagtagacg tgttacgaga tatttttggt ttatcaaatg aaggtttgaa ggtaggagtt
     4381 tactcgtatg gtgctgacag tttaagtaaa ccatttattt taacagcgga tgtgttagat
     4441 gaatttgaag cgcaaacaaa attaattgca ttctcaaatt gtgtggcggc aacaggatta
     4501 aaagtaacag tagaaaatgg tgcagatgaa gtagctgaaa ttgaattaga attcactgct
     4561 atgattgatg ataatagaaa atgttattat gaagcaattg tatcagagct tgatgctact
     4621 ggtcgcgatg catttgtaaa gcaatggcac acaaatttca caccagaaat ggttgttgcc
     4681 acaccctgaa actccccttg aattgccttt ggaaaatgaa tctggcatag gggacgactc
     4741 agaagaaaca actcaagatt agacggggta aattatcccg tcttttttat ttgcatagga
     4801 ggaattttaa tggaatttac aatagatttt ttagatggaa ctaaagcgca attagactca
     4861 aatgtcacaa tgttaacttt atatcgattg caaaacgaag gtgaaggtgc tgtcgatggg
     4921 aaatttttaa aaggttttat gcaaaaagaa gcagatttag accctatttc aattgcacaa
     4981 gcaatgtatg cggcgtatag acaagctaca gacaaaaaaa aagcaaagaa ttttgaagag
     5041 tttatggaaa attatcaaat ggatttggaa attgatatgc aaatttattt cgcaattgtt
     5101 acgaagcgag ctagagatga gtttgcaaaa caattcaaaa agaaaacagg tagttcaaaa
     5161 ggaaaaaaat aaaactgccg gacatcatta ttgaatgtgt agaggatttg tacactttat
     5221 atctctatgt gtttgaacta aatcgtgatg atatctggca actgccctta acatccgttc
     5281 agatgatagc agagaaaaag actgcaattg aaaactggac aaattatgag aacgaaaagg
     5341 caggtgggaa ataaatggca aacaatcaag cgaaagttac atttaaagtt tttaatcagg
     5401 acttcaatag agccatggca gaaatgaacg ctgatagtaa aaaattgaga caagaattaa
     5461 aacttgaaca agaacagtta aaaaacactg gatcagaaac tgataaatta gcagctgatt
     5521 taaatggtct acaaaagcaa tatgatgtag ctagtcaaaa aacaaaagaa acagcgcaac
     5581 agctagaaaa ggtaaaaaca aaatttggag aaaacagcac agaagcaagt cggatggagt
     5641 cagctcttaa gagcgcgcaa ataacagaac aacaacttgc taacaaaatt gagcttacta
     5701 ctgatgcttt agagaaggca aaatcagcag aaactggtag agttgcttct ttgaataaat
     5761 tgcaatcaga acaatctaat ttagaagctc aatcggaaaa attggcaagc gagtataaat
     5821 tagagtcggc tgcgatggaa ggtactgcta cagaagctga aaagcttgct agagctgaaa
     5881 agtatcttgc tgatcaaaca aatgtagctg aacaaaaaat taagaatatg gaacaacagc
     5941 tagaattagt taaacaagaa tatggtgaaa atagtacaga agctttgaag atggaaacat
     6001 cattaaatga agcaaagatg tctgtgtcga aactaggcaa tgagttgact gaattcaaga
     6061 atgactctaa caatgccggg caagggatgg atgaattaaa taataaaatg tctggtgcgg
     6121 ttatgatgga agcggcagag catatcgcag ctgtaggaga aaaactcaag gaaattggtc
     6181 aatatgcact tgaagctttt cgtgaagtag atgaaggtct ggacacaatc attacaaaaa
     6241 caggtgcgac cggaaaagcc ggagaagatt tatcaaatgt atttgataac attgcaggca
     6301 attctaagtt tgagtttcaa caaattggtg atgctgtggg tgagctcaac actcaatttg
     6361 gatttacagg taaggaatta gaaaaaaatt ctatgaaact gttgaagttc tctgatataa
     6421 atggttctga tgttactaac agtactatga aggcgaaaca ggcacttgaa gcttatggat
     6481 tggaaaataa agatttatcc atggttcttg attcggtgac ttatgttgcg caagggacag
     6541 gtcaaagtgt cgatgacata tttgataagg ctgtcaaggg tgcaccacag attgaagcat
     6601 tgggtctatc atttgcggat ggtgcacaat taatgggtaa tttggacaaa gctggtgtcg
     6661 attcaagtgc cacattatct agtttgacaa aggctagtgt tgtgtacgca aaagaaaata
     6721 aaactcttgc gcaaggttta tctgaattag aaggtaaaat ttcgggagct aaaacagaga
     6781 ctgaaaaaat taatctagct gcggaagttt ttggttcaaa gggtgcgcca cgaatggtaa
     6841 aagctataga ggacggtcgt ttaagtttag acggtcttgc aggaacggcg gaaatggctt
     6901 caggaacagt gtctaaaata tttgaagcaa ctcttgaccc tatagaccga caagatgtcg
     6961 ctttgaataa tgtgaaaatg gcaatggctg atttggggaa ctctattgca gaggtacttg
     7021 cgccaattct agacgcgctt tcatctgtct tacaaaaggt gtcagagtgg ttcaatggac
     7081 tacctgcccc tgtccgacaa gtgacagttg taattggact gttgctaata ggttttaccg
     7141 cattgctccc agtcataact gcgatagttg ctatgattgg cattttagga acagcgatgt
     7201 taggcgtggt aggcattata gcagcgatag ttgctggaat tgctatatta gtcgttggat
     7261 tcaaatggtt gtgggataat tgcgaaggtt ttcggaattt ctggatagga ttgtgggaat
     7321 ggattgttgc ggctttcaaa gcagcttggg aatatattca accaggttta caatctattg
     7381 gagatgcact taaaaagttc tgggaagaat atggtccgac aattattgga gcgttgcaag
     7441 ctgtttggga ctttattgta ggctttgttg cttggttaga accattgtgg acatttttat
     7501 gggaaggttt aaaaagtaca cttaaatttg catgggatgc aattttagct attgttcaat
     7561 ttgctttaga ttatcttggt ggtttgattg acttttgggc agggattttc acaggtgact
     7621 gggatagagt ttggaaaggt attcaagaaa tgactagtgc tgctttggaa gctatcaaag
     7681 gtatattctt tgcactggtt aggtggatag ataatattct aaagtcttta ggaatagaca
     7741 tgggtgctat ttggaaaagc atcactgatg ctacaaaaac agcatggaag tggattagtg
     7801 attacattgt taatcctatt agagatgcaa acaatagagc caaacttatt ttagctgcct
     7861 ttaaagccgc ctttaagatt acttttgatg taatacgaga taatatagca aacacgtggt
     7921 caaaagtaga ggataaaatt ataaaaccag tgaaaaatgc atatgataaa gttaaaaaca
     7981 ttgttgacga tattaaagat acatttaaaa atctaaaaat aaaatttcct aaaattgaaa
     8041 tgcctccaat gccacatttt agtttgaaag gtaaatttag tttaaaagag atgacagttc
     8101 ctaaattgga tgtaagctgg cataaaaatg gaggtttctt taactcagca tctgtcattg
     8161 ggattggaga agctggtccg gaagccgctg tgcctcttgt tgggaaaagg atggaccctt
     8221 ttgctgacgc tgtatcaaat agaatgcttt catcgctacc tagtatggca caagggaaaa
     8281 tatctgaaaa caataatgat gtcaaagttg aaattaatat gaataataat ttatatggtg
     8341 ctgctgatga agatagatta gtcaataaag tgaaacgcga aataactaat agtatgaatt
     8401 ctaaaacaac agcatgggga ggtagaactt cgtgaattat caaatcttta tagatgatgt
     8461 ctcatgtaat gattatgatt tatgtgttgc agaaagacct ttgctaaaaa cacctgaaca
     8521 agacgttgaa attagagaaa ttagaggaag aaatggtgct tttattatcc cgtttgcata
     8581 taaaaatgta gaagaagaga tttcatttaa ttttttagat gattctaagt catttaaaca
     8641 actttttaga gaagcaaaac ggtattttat gaatgggaaa aaccttgtat tctctgatga
     8701 tccacatgta tatagaaaaa ttgttcacgt atctttttcg gatgcagaaa ataccgtttt
     8761 agaatacggc ttttttaatg ttattttcac tttagaccct tttcaatatg caaatacaaa
     8821 tattattgaa attaataaag gtgacttact cgtcaatgaa ggaactatag aatcacagcc
     8881 ttatatgaaa atttatgcga ccggagatgt tactttaaac atttcaggaa atacctttgt
     8941 ttttaaagat attgatgaat atatagagct tgattgtgaa aatctgatgg tgtacaagac
     9001 agtgaatgat gttattgcca cagctgacaa taaaatgttt actcctgatt ttccggtgct
     9061 taatgtagga gaaaattatt tcgattggat tggaaatata gagaaaatcg aagtcaatcc
     9121 ttattggagg tatgtgtaat gataccaatt ttatatgagt caaaaaatac agattttgaa
     9181 aataatggat taggtctact aaaagacatt atcactgcaa cagttgacga aacattgaat
     9241 ggaccgtgtg agttgacaat tgaatatcct gtaacagcaa ggctattcga taaaataagt
     9301 gacgagtcta ttttcaaagt aaagtcaaat gaagtgcaaa attttcagct tttccgagca
     9361 tacaatatag tgcgtgacga atttaccagc tccattatag tgaaggctaa acatattaca
     9421 aatgatgcta cttcaaattt tgtagaagat ttcacggtcg aaaatattac accaggtgcc
     9481 gcattaaata aattgttttc ttctactgct tatccttcta aattttctgg aacgtcagac
     9541 atcgctacgt tatcaagtac tagtatacaa cgaaaaaatc cccttgaaat tattgcggga
     9601 gtcgaaggct ctctcttgga tacatgggga ggggagttag ttcgtgataa ctttagtata
     9661 aaactattaa aacgacgtgg gagagataaa gttgcatcta ttagataccg gaaaaattta
     9721 actggattag aaactgatgt agatacggaa aatgtaatta ctcgaattta tccattcgcg
     9781 aataagcaag attcaaatgg taatgagcaa acgattgtat tgcctgaaaa atatatagat
     9841 agtgaacata ttaatgcata ttcgaatgta aaaatcttgg cagttgatta ctcatctgat
     9901 gacacagtga cagatgtaac aacacttcga aatgtagcgg gtaaatattt tatgaataat
     9961 aagacagata taccagaaat gaatatcaaa gtatcttttg agccactttc tgaaatgaca
    10021 ggttatgaaa aatataaaaa tttggaagca gtcgagttag gagacacagt cacagtttat
    10081 catccagatt taaacgtaaa tataactgca aaagctgttc gaacaaaata taatgttatt
    10141 actgaaaaat atgaagaaat agaacttggc agcattaaag ctgattttac agacacgtta
    10201 aaatcagata taagcaaaat tatcgacgaa gttccgactc aggattggat gcagaatgaa
    10261 ttaaaagcaa taggagatag tatccaaggc gcaaacggag gtaacattta tactttccca
    10321 acatttaaac cttcgaccat gtattttatg gacactgaca atgtgaatac tgcaaaaaaa
    10381 gtgatggtta tgaacagaga aggtatagcg ttttatcaaa atgggataac cggcattcct
    10441 aaaaccgcat ggggaataga tggtaaattt gttgccgatt ggattggaac agggacctta
    10501 agggctatcg atattgaagg ggtaagcata acaggctcat caggtttttt tgacacattg
    10561 tattcaagtt ttttaccagg tctcccagca cctcaatata aagaagaact gaaaatgggc
    10621 ggaggtgttg gtttccattt aaccgcaaaa tcggtgacaa aaccttatcc cgctctgcaa
    10681 atgagaatga acacgaatgg agatttaggg cttgctattg aagctgtgaa tgaaaatacg
    10741 ggtgcgatag atgctgatag ggttgttaga ctgtcccctt ttgcgggaat tgaaacacct
    10801 ttaattcaaa gcgacggttg gtgctgtatt ggtgctaatt ctgatggtaa aaccgcttct
    10861 attgatcgcc atacttggat ttccggtggc ggtccacaat tacgttatgt gccgcatcga
    10921 gctagtaatt ttgagactgc tagttcagaa gaatataaga aaaatatacg taaagtaaag
    10981 aaaactgcgt ttggtaaaac agctaagcaa gtcataaacg aaacagatgt tttcacttat
    11041 tcgcatattg ctgatgaaac aaacgaaaag aaaatcggat ttatagctga acaagcttct
    11101 gattcgctga ctacagccga cggaaaagca attgacttat ataattctgt tgcgtggcta
    11161 tatcaatacg caaaagaaaa cgaagaagaa aaagaagcat taaaagcaga ggtaaaagag
    11221 ttgaaaaact tagtaaataa attagtaaac gaggtgagta aatgactgct ttaagaaaaa
    11281 taaacgcaac attagactta aatagaaaat cttggaatat tgagcgcatt gaagcagttc
    11341 aaggtgatat tgattctctg atgatagcag ttcaaattgt cgaaaacggt aaattgaaag
    11401 acttaacaga ttataagcca acgttcgcgg tagttttacc gggcacggtc aaatatgtaa
    11461 ttgacgattt acattttagt aacgaaaaaa tgaatgaagg ttacttcgaa tacacatttg
    11521 taaaagaagc attttctgtt ccgggagtgt atgatacagc ccgttttatt ttgcaaaatg
    11581 aagatgggac agagctatct ggtatgcctc gttttacgta ttatgttgaa aaagacccgt
    11641 tgcaaggaaa agtagtagca gaaagctata taagtgattt cgagagatta gaacaaatga
    11701 tacatgctgt agaattagaa attgctgaac tacatgatga agtgacaagt gaaagcgtgc
    11761 gtttagatag tgaaattgcg gcacttgatg aaaaaatcaa tacagaaact agtaagcttc
    11821 aaagtgaagc agatgacttg caacagcagt ttgataactt aaatcccgct caattcgcac
    11881 aaaaaactgt tttggatgaa catgttaatg atgctgatat tcatgtcaca gcgactgata
    11941 aaacaaactg gaatgcaaaa gaaacagtag aaggcgcgca ggctaaagca gataaagcac
    12001 ttgctgatgc aaaagctttt tttgaactat ctagctctgt acaaagtgtt actttgacgc
    12061 cgaagaacgg atttgttgca agtcagcctt taatagctcg atacattaag tttggcaatc
    12121 ggtttctagt cattgttagc ggaattgtag gcaaagggac tggaagtgga actggcatat
    12181 gcgcaacgtt accaactttt ttggctcctg atgcgagctg gaataaactt tattccgctg
    12241 cacagcagag tacggcagca agtaatcaag cgaatatata tctaagtgtg agcgctgata
    12301 taaatatcgt tggagttggt tcggtagacg tgaacaccgg acttgatggc ataatttatt
    12361 taactaaaga ggtgacaaca tgagcgagtt aataaaagtt tttaaatatg atgacaacgg
    12421 cgtatttgag cgtgacgact taattatttt aaaaaaaggg gagaagattc cggatggcta
    12481 tacactaatt gaaccaccag taccagcaat taatccggtt tttaatacga aaaagcaaaa
    12541 atggagtcct ggtgaagaag caagcattcc tgaaccgcca gaattgaccg agcttgaaaa
    12601 attaacacaa gattatgcgg acttaatgct ttatgtagca gaagtcgaac agaagacgga
    12661 acaaacgcaa caagataatg caaacttact attatctttg gcggaggcag gtgctttgta
    12721 atgattaatt ggtatgaaaa agtgaaagat tattttttag gcggctacta tactgaagca
    12781 gatgttaata aattcgttac tctaaaaaag ataacgagat cacaagcaga tgaaataatc
    12841 gctatgaaag aagcaaaagc cgaataggct tattttttat gttgaaaata ggggatggtt
    12901 gggatgtatg aaggcttaac gaaagtattt gattatgctt tagcaaaaga aatgtttttc
    12961 gcggcgctat ttgtcgcact gtttattatt ttgttgatta ttactaaaag aatctgggat
    13021 gactcaaaaa tagtaagagt agaaatgaaa gaagagcggg acaaaatgga aacagagcgg
    13081 gagaagcggg ataaagaatc gaaagaagaa cgagataagt ttattagtac gatgaacgaa
    13141 caacagcgtt taatggacaa gcaaaatgac atgatggggc aacagcaaca gtcaattgat
    13201 agtttgtcaa aatcggtcgg taaattagca cataaggtag atttactaga acacaaaatt
    13261 acaaaataaa ggatgataaa aatggaattt ggaaaagagt tactagttta tatgacattt
    13321 ttagtagttg taacgcctgt ttttgtgcaa gcaattaaaa aaacagagct aattccttcg
    13381 aaatggcttc caacagtaag tatttttgtt ggggccattt taggggcctt agcgacattt
    13441 ttagatggtt ctggatcgct tgcaacaatg atttgggcag gtgcattagc aggagctggc
    13501 ggaaccggtt tgttcgaaca atttactaat cgagctaaaa aatatggaaa ggatgataaa
    13561 taatggcatt aacagaggca tggctaattg aaaaagcaaa tcgcaaattg aatgctgggg
    13621 gaatgtataa aattacatcg gataaaacac gaaatgtaat taaaaaaatg gcaaaagaag
    13681 gtatttatct ttgtgttgcg caaggttacc gctcaacagc ggaacaaaat gcgctatatg
    13741 cacaagggag aaccaaacct ggagcaattg ttactaattc caaaggcggg caatctaatc
    13801 acaactacgg ggtagctgtt gacttgtgct tgtatacaaa tgacggaaaa gatgttattt
    13861 gggagtcaac aacttcccgg tggaaaaagg ttgttgctgc tatgaaagca gaagggttta
    13921 aatggggcgg agactggaaa agttttaaag actatccgca ttttgaacta tgtgatgctg
    13981 taagtggtga gaaaatccct actgcaacac aaaacactaa tacaaattca aatcgttacg
    14041 agggtaaagt cattgatagc gcaccactgc taccgaaaat ggactttaaa tcatcaccat
    14101 tccgcatgta taaggtagga actgagttct tagtatatga tcataatcaa tattggtaca
    14161 agacatacat tgatgataaa ctttactaca tgtataaaag cttttgcgat gttgtagcta
    14221 aaaaagacgc aaaaggtcgc atcaaagttc gaattaaaag cgcgaaagac cttcggattc
    14281 caatttggaa taacacaaaa cttaacagcg ggaaaattaa atggtatgca cccaatgtaa
    14341 aactagcgtg gtacaactat cgaagaggat atttagagct ttggtatccg tcagacggct
    14401 ggtactacac agctaactac ttcttgaaat aaaactattg ccctcgcttt tgcgggggtt
    14461 tttggtcgag tagacacatc aacaaacatc tgttccaatt gatattgatt gtaataagag
    14521 gttataatga cataaaaacg ttttattggg agcgggtgtt tattacgatt gacgtagaaa
    14581 atatattaga gaaagttgga attggtagta caaatccctt taaagttaaa gcctccgatg
    14641 gtaaaattta tgtaataaaa attaagaatg atgcttgtga cggaaaaact ttgttaaacg
    14701 aactaatagc atataggtta gctaagcttc tagatttacc aatatcaaat tgttgtttga
    14761 taaatttgaa aaaagaacat attgaggata atattttcaa tatggatggt attaattgtg
    14821 tggaagg
//
LOCUS       DASDYK010000064        14683 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.064, whole genome shotgun sequence.
ACCESSION   DASDYK010000064 DASDYK010000000
VERSION     DASDYK010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14683)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14683)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14683
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.064"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..407
                     /locus_tag="U0308_001879"
     CDS             <1..407
                     /locus_tag="U0308_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2316841.1"
                     /translation="EVSVYQFERKYVLNKFLSSPDVFWQMNALMQSMVTPMLEREGYV
                     NLPSSEKVLAGLIACGERFGRIESDGSCLIPYYFTQKILGNYLNLARAYVATNLRKLE
                     EDGIIALSPKPWRVNNFEIHKQKLKENHEPYI"
     gene            complement(496..1023)
                     /locus_tag="U0308_001880"
     CDS             complement(496..1023)
                     /locus_tag="U0308_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HEM2316842.1"
                     /translation="MKTFTRILVLLAGIAMIILGVWFLFHPGISLLTSTLMFGFLLLI
                     SGIFHTISYFSDRKSQNVSGWVLADGILSILLGFLLLFNEFDGTLTLVLLFGMWVLFA
                     GIMRTIGAFTAKQNNVQGWGWILTIGIIGIIVGFIALFNPVVSAIGIVLVVAIFFIVQ
                     GIGAIATFFFIGKNS"
     regulatory      1262..1362
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            1471..2748
                     /locus_tag="U0308_001881"
     CDS             1471..2748
                     /locus_tag="U0308_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HEM2316843.1"
                     /translation="MSNEYKFETIQVHGGHTPDGDTHSRAVPIYQTTSYTFDSPEHAA
                     ALFGLQETGNIYTRIMNPTTAVLEERLTLLEGGIGAVATASGMAAITYSILNIAGSGD
                     HIVAAATLYGGTHTLFSHTFKTFGIDVTFVDPNEPENFEKAIKDNTKAVFIETIGNPD
                     INIVDIEKVAEIAHASDIPLIVDNTFATAYLNRPFDFGADIVVYSATKFIGGHGVAIG
                     GAVIDSGKFNWANGKFPKLVVPDDSYNGLSYTNDVGAAAYITKLRVSLLRDTGAALSP
                     FNAFLLILGLETLSLRLEQHVKNAKQVANFLNDHPKVAWVNYPGLSDNKYHELAQKYL
                     PKGPGSIFTFGVKGGYEAGKKVIESVELFSHLANVGDAKSLIIHPASTTHQQLSEEQQ
                     LTAGVKPESIRLSIGIENADDIIQDLTKALEQI"
     gene            2765..3871
                     /gene="metX"
                     /locus_tag="U0308_001882"
     CDS             2765..3871
                     /gene="metX"
                     /locus_tag="U0308_001882"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEM2316844.1"
                     /translation="MTLQQKELFQKSPLLLENGETLSPVLVGYETYGTLSASRDNCIL
                     LEHALTGTAHAAKHFESDAPGWWDDYIGPGKTIDTDKYFLVCTNVFGGCSGTTGPSSI
                     NPKTGEPFRLQFPGFSIKDIIKVQRELLEQLGVTRIVSVIGGSMGGMQATEWAIDYAD
                     ITDSIINIASPLAAGPDAIGYNLIMRMAILNDPDFNGGNYVGQPEGGLATARMVGMMT
                     YRTSELFSKRFERFTVAESSPAAFSKEHFQIESYLQYQGDTFVERFDANSYLYLTKAI
                     DLFDVTAPAKDDLPAFAKIKIPYLLIGITTDQLFRIHDLRRGYELLKEWDVPVTYHEV
                     ASEYGHDAFLVEKEVPKFEPLIRSFLSNLPVKSI"
     gene            complement(3909..4709)
                     /locus_tag="U0308_001883"
     CDS             complement(3909..4709)
                     /locus_tag="U0308_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HEM2316845.1"
                     /translation="MDVESSPLMQKIDYSTRKKIDLVNNSILRYIVRAMLACLFLTLG
                     TAVAVMIGDKVDHFAPGLGKITYAFMFSWSLVMIIYMNAELGTSNMMYMTTGVYQKIV
                     KPGKALQILLLCIVCNLLGGILAGYLVSLTSVFHNLPADHFLFTAVSGKLEKAPLQIF
                     VEGIFANIVVNTAVLCTLRMKDDAGKVIAMIFIIFIFAFLGFEHVIANFSSFSLAFFA
                     SGGTLAAMTAGNVTVNLVLALLGNFVGGGLVIGLGYAWLNRTKSIYKD"
     gene            complement(4936..5478)
                     /locus_tag="U0308_001884"
     CDS             complement(4936..5478)
                     /locus_tag="U0308_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1269 domain-containing protein"
                     /protein_id="HEM2316846.1"
                     /translation="MKKEKTVLIMNFDEESISYQAFSEMKRLHQERKIIGYQMAVVKH
                     EPGNKLVAQDFLDFTGADKNMKDSLIGMLIGILGGPFGILIGWMVGAIVGSMRDAGEV
                     KDALNVFERTLKTIPEGSTGVILIATEQELANVNDVAMDELHGRVQRMDEAIVAQEIK
                     SAQETEGKAKDSAKKHWFSK"
     gene            complement(5606..6376)
                     /locus_tag="U0308_001885"
     CDS             complement(5606..6376)
                     /locus_tag="U0308_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1295 domain-containing protein"
                     /protein_id="HEM2316847.1"
                     /translation="MYWTVTLALLVYFILWFIISKIKGKYSLVDIAWGGGFVVVAWTG
                     FLTTFSMTAQSITILVLVTIWGVRLFWHLARRNWNKPEDYRYVNMRKRWGTTLVNLKA
                     FLNVFVLQGVLLFIIALPITHSFANETATFAWWQILGIVIWIIGFIFEVGGDLQLENF
                     KKNPANKGKLLTTGFWSVTRHPNYFGEALSWWGVFLVAYTQLNDLWLITSPIVITLLL
                     LFVSGVPLLEKKYQDRADFQAYANKTSKFFPFIGKKGL"
     gene            complement(6376..8142)
                     /locus_tag="U0308_001886"
     CDS             complement(6376..8142)
                     /locus_tag="U0308_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family EDD domain-containing protein"
                     /protein_id="HEM2316848.1"
                     /translation="MESESKRLLQSMLNGAAEVISKKDELNRINVFPVADGDTGSNLA
                     SLMQAIIDHVSPREYSTKELLEEVASAALIGARGNSGMIFAQYLNAVAESYHHLESTF
                     DGLVQAFQNAVHKAYEALLDPKEGTILSVMKAWSEELAGTYEQERSFQQSLLNAQIVA
                     EKALINTEFQMPILRKNRLVDSGAKGFYYFITGLTNAYCGKAVSDPVRFTEVEQTAEH
                     RHVETSEPKYRYCSEFIIKQATISHQHLQEILAAKGDSLVIAGNEKQIKIHIHTNEPK
                     EVLSLMAAYGVMTYQKVDDMRLQYEVTKKPRAKIAIVTDSIADLPEAFLLEHQVHVLP
                     MNILAGEENFLDKLTVGPNMMQEKLRKQTKMSTAQPTIRTVDALLSFLEHKYEHVLVI
                     SVAAKLSGTYQLIKQRIKARELSSDWIRVIDSKLNSVAQGILVKQAVELVESGKSWES
                     IYPEVEQMIERTFIYVAVADLSPMVQSGRIPRVLGKLAQKLSLYPIVSLDESGDGKLI
                     GVSFSQKQSMKKIIKKIAKLQLKELAITHVSSRDTAAIWQKQLEKETGEISYLVDSSA
                     AIAISAGLGSVAVAGIKKEETI"
     gene            complement(8145..8558)
                     /locus_tag="U0308_001887"
     CDS             complement(8145..8558)
                     /locus_tag="U0308_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2177 family protein"
                     /protein_id="HEM2316849.1"
                     /translation="MAQFLKLFLTSAVVFLIFDLFWLLVASKKMYQQFIGDLMGDVKL
                     APAVIFYFIYVVGVTFFVLLPGTEKGSLGYTILAGALFGLVCYATYDLTNLATLKDWP
                     ITMTIIDLVWGTAVTTVTSVIVYFINLHFFSGAGS"
     gene            complement(8696..10099)
                     /locus_tag="U0308_001888"
     CDS             complement(8696..10099)
                     /locus_tag="U0308_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEM2316850.1"
                     /translation="MTSVMWFRRDLRVNDNKALYHACKEDDLLLLFQVNPAQFITGSP
                     SHQAFFASVAHFKQEIDKTAHLQIMFGEPIECFQQLKDSLPSWDKVYFNRDETGYGAK
                     RDEAAQAFFDEQKIEVQAFHDSYLHSAEEVKKSPTEYYKIFTPYYKKWREEIKETPFK
                     VTLKHENIRKESLFLKYEEQFAEMTSDLPILDIGERAANTRLANFIKHDVADYDKARD
                     FPELDKTSHLSRYLRTGEISIRTIWQTLQETEATEGRATFEKELCWRDFYNMIYVSFP
                     NQKNEPIQENYRFIEWENNREYFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMITA
                     SFLTKDLLIDWRFGEKYFQQMLIDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQ
                     KFDSTGKFIRKYVKELANLPDKYIHQPEKMSETEQKEHGLLLGKDYPFPIVDHKERRK
                     LAIARYEFSKEHSRGNI"
     gene            complement(10211..12676)
                     /locus_tag="U0308_001889"
     CDS             complement(10211..12676)
                     /locus_tag="U0308_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316851.1"
                     /translation="MAFKKLILVLTIAALFLGFKIVVAAENGSRDLASNEAIVTNFTE
                     LKTAISEDNGIDTVYLGADVELSGGIIIPATKKTFTLSGKNPATGEIHTLTETMASAG
                     AQSSVITVNTNTGAKETTLRDINVVGKNYYGTISVYGAAKNVVQNYENVHYQGPQMIY
                     NLNGTANFKGTNDITIASVVSGSAAPNEVAEIKGVSVSGKLNINHASSNANSAFWFGG
                     GTAEVNTFTVEENAEVTILSNGTGMFYRSGTKPIDIDVKKNAKLAITSNNNIFRDTPG
                     GAVKIASGADVTMTKTAGGNPLLWVADDITVSPDARFILNKTGGTGYIIQFYNATAKL
                     DINDPRSFLITTNSNTPMFYWPYANTFNLNAQMVNYWDTVGTIDRTDLAAQSFSLPNG
                     ENVTGSLTYTGTTTKILSTNAGMTPTNFNQNTARMIAMGRLEGTINPVTDADNEITGT
                     ATPNAFISISYTENGENKVLEGQANEAGTYRIAIPNGFIKPYIKLTTTIKQDQKRITL
                     DDITVEDVTPPSGEAVTQIIQLGDPFPDVAELVTNIYDHSDNTSGAGVTTTLQSAPDT
                     NVFGPTEAIVRLEDKAQNYVDIRVPVFIKDDETEIQDGKALRAADFSVNVKDIIELND
                     AELEQFILSKSGAKAFNIETGEDLSAELKVASTNLKKETGTYAATIQIDGLTKEIAIQ
                     VTGELKFNHVPETISFETMELNQQKNIAKRNADFDLSVLDSRGSGGKFSVTATVKTPL
                     TSTINSAHTLPNGLIFIDNTGAKKILSAEPITIFESQSASEMIVPIEWAEDQGILVEV
                     DAAEAYVDESYETTIEWTLTDAP"
     gene            complement(12694..13719)
                     /locus_tag="U0308_001890"
     CDS             complement(12694..13719)
                     /locus_tag="U0308_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF916 and DUF3324 domain-containing protein"
                     /protein_id="HEM2316852.1"
                     /translation="MKKSFLSLLFIIPLLVTCSNFAEAQAAEGDVGYSVQAHIPANQI
                     DKRQTYFDLKMQPKQKQTVNIDVMNSSNEEIQVEAAINYASTNRTGVIDYTKNDLTKK
                     DKSLEYPLPELAKIPDDQKLLTIPVDGKKTVQVMIEMPAESIDGVVLGAVEFKKKNTN
                     ETKKTKGVSLKNEYSYIVGMQLAETDKQVKPHMNLLSIKPALLNYHTAIVAKLQNDQP
                     VILENLSIDAKVYQQNSDKLLYQTKKANMKMAPNSNFDFGIDLENQPLKEGKYRLKMT
                     ATNGVETWTWDEAFTIGKEGQNLNKEAVNLEKTNTWLYVAIVAGVVLIALIIILVIRK
                     RRQKQEK"
     gene            complement(13787..14500)
                     /locus_tag="U0308_001891"
     CDS             complement(13787..14500)
                     /locus_tag="U0308_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WxL domain-containing protein"
                     /protein_id="HEM2316853.1"
                     /translation="MIIKKTLIVGLIGISSVTLFAPAAFAVTSEGDSKATVKFKAGTG
                     VVNPVDPENPTKPIDPLDPSNPTDPGTGNTGSLTLDYVSSVNFGEHEVSSTEQSYSST
                     SRKPFIQISDRRGTGAGWKVTATATAFQNEDGAASLSGATLSFKNGETASASNTATTP
                     TAAQTVELPTDGTSIVSVVSAKESEGMGTWINRWFGATPNDTASLNNNVQLTIPAGSA
                     TLGDHEATITWTLSDAPGV"
BASE COUNT         4270 a         3082 c         2598 g         4733 t
ORIGIN      
        1 gtgaagtgag tgtttatcaa tttgaacgta aatatgttct taataaattc ttaagttcac
       61 cagatgtttt ttggcagatg aatgcactta tgcaaagtat ggttacacct atgttagaac
      121 gggaaggtta cgttaattta ccttctagcg agaaagtttt agcgggatta attgcttgtg
      181 gggagagatt tggaagaatc gagtcggatg gttcttgttt gattccctat tatttcaccc
      241 aaaaaatctt gggaaattat ctaaatttag ctcgagctta cgttgcaact aacctgcgaa
      301 agctcgaaga agatggcatt attgcgcttt cgccaaaacc ttggcgtgtt aataatttcg
      361 agattcataa gcaaaaacta aaagaaaatc acgaacctta catatgagtg caaaatgaat
      421 acttttttct aattgtattt cgtaaaaata tgcataataa aaagaagcta tcaaactaag
      481 atagcttctt ttttattaac tatttttacc aataaagaaa aatgttgcga ttgcgccgat
      541 accttgaacg atgaagaaaa tcgcaacgac aaggacgata ccaattgcag agacaactgg
      601 attgaataga gcgataaaac caacaataat gccgataata ccgattgtta aaatccagcc
      661 ccagccttgt acgttgtttt gtttggcagt gaatgcgcca attgtacgca taataccagc
      721 aaataatacc cacataccga aaagtaatac gagtgttaaa gttccgtcaa attcattaaa
      781 taatagcaag aaacctagta agatggataa aatcccgtca gctagtaccc agccagaaac
      841 attttgtgat tttctgtctg aaaagtaaga gattgtgtgg aaaataccag aaatcagtaa
      901 taagaaacca aacattaatg tcgaggttaa taatgaaatt cctggatgga ataagaacca
      961 aacccctagt ataatcattg caatccccgc taataaaaca agaattcgtg taaaagtctt
     1021 cattttttat ttcaactccc ctttgttttt tctaattcaa ccccattttt aatgaaatat
     1081 aattagtctt aactataata gcctaaaaaa tggatttaaa accttttaaa aaaatttttt
     1141 ctttcaaaaa aaacgtcgtt gtcacaaatt caacacaaaa agtactaatt ttagactttt
     1201 tcagcacata gttgacaatt gatggcatcc agcgtaatat ataacttaat ttaatagtat
     1261 tttcttatca cgaaaggtgg agggactggc cctttgaagc cttagcaacc ggaatttatt
     1321 ttcacggtgc taattccagc agtatattct gaaagataag tcggaaatcc aagtttagga
     1381 aactctatcc tctctggcgg cttatatact gctagggagg ttttttgatg gaaattactg
     1441 ataaatacat attaaagagg agtggatttt atgagtaatg agtataaatt cgaaacaatt
     1501 caagtacacg gcggacacac cccggacgga gatacgcatt ctagagccgt accaatttat
     1561 caaacgacgt catacacatt tgatagcccg gaacatgccg cagccttatt tggtttacaa
     1621 gaaactggaa atatttatac acgaattatg aatccgacta cagctgtttt agaagaacgg
     1681 ttaacgctac ttgaaggcgg tattggtgcg gttgcaacgg cttctgggat ggctgctatt
     1741 acttactcta ttttaaatat tgcgggttcc ggagatcata tcgtcgcagc cgcaacactc
     1801 tatggcggaa cgcacacgct attttcccat acgtttaaaa cttttgggat tgacgtaacg
     1861 tttgttgacc ctaatgaacc tgaaaatttt gaaaaagcga ttaaagataa tacgaaagct
     1921 gtttttatag aaacaattgg gaatcctgat attaatattg tcgatatcga aaaagtagca
     1981 gaaattgcgc acgcatccga tatcccgctc atcgttgaca acacattcgc gaccgcttat
     2041 ttgaatcgcc cgtttgattt tggcgcagat atcgtcgttt actcggcaac aaaattcatt
     2101 ggtggtcacg gggttgcaat tggtggtgcg gttattgact caggtaaatt taactgggca
     2161 aatggcaaat ttccaaagct agtggtacca gatgatagct acaatggttt gtcttataca
     2221 aatgacgttg gcgcggcggc ttatattacc aaactacgcg tctcactcct tcgtgatact
     2281 ggcgcagcac tttctccgtt caacgccttc ttactcattt taggcctaga aacactatcc
     2341 ttacgccttg agcaacacgt gaaaaatgcg aaacaagttg ccaatttctt aaatgaccat
     2401 ccaaaagtag cttgggtgaa ttatccaggt ttgagcgaca acaaatacca cgaattagcc
     2461 caaaaatatt taccaaaagg acctggctcc attttcacat ttggagttaa aggtggctac
     2521 gaggctggta aaaaagtgat tgaatccgtg gaattattct cgcatttagc gaatgttggc
     2581 gacgcaaaat cgcttatcat ccatccagct tccacgaccc atcaacaact aagcgaagaa
     2641 caacaattaa cagctggcgt gaaaccagag tccattcgcc tatctatcgg aatcgaaaat
     2701 gccgatgata ttatccaaga tttaacgaaa gcattagagc aaatttagga ggaagtgaag
     2761 agaagtgacc ttacaacaaa aagaactatt tcaaaaaagt cctcttctac ttgaaaatgg
     2821 agaaacatta agccctgttt tagtcggcta tgaaacatac gggacacttt ccgcctcacg
     2881 cgataattgc attttattag aacacgccct tactgggacg gcacatgcgg cgaaacattt
     2941 tgagagtgac gctcctggtt ggtgggatga ttatattggt ccggggaaaa cgattgatac
     3001 agacaaatat tttctggttt gcaccaatgt atttggtggt tgtagtggca cgactggacc
     3061 ttcttcgatt aatccaaaaa ctggcgagcc tttccgctta cagtttccag gtttttcgat
     3121 taaagatatt attaaagtgc agcgtgaact tttggagcaa cttggggtta cgcgaattgt
     3181 ttcagtgatt ggcggatcga tgggtggtat gcaggcgacg gaatgggcga ttgattatgc
     3241 cgatatcacg gatagcatta tcaatatcgc ctccccgctc gctgctggac ctgatgcgat
     3301 tggttacaac ttgattatgc gcatggcaat tttgaacgac cctgacttta atgggggcaa
     3361 ctatgttggt caacctgagg gcggacttgc tactgcgcga atggttggga tgatgactta
     3421 ccggacgagc gaacttttct cgaaacgctt tgaacgtttc actgtcgccg agtcttctcc
     3481 tgccgctttc tcaaaagagc attttcaaat tgaatcgtat ttgcaatatc aaggggatac
     3541 ttttgtcgag cgatttgacg cgaatagcta cttatattta acaaaggcaa ttgatttatt
     3601 cgatgttact gctcccgcga aagacgattt gcctgccttt gcgaaaatta aaattccgta
     3661 tttgctcatt ggcatcacga cagatcaact tttccgaatt catgatttgc gccgcggtta
     3721 cgagctttta aaagaatggg atgtgccggt tacttatcat gaagtggcct ccgaatacgg
     3781 tcatgacgct tttctagttg aaaaagaagt gccgaaattc gaaccgctca ttcggtcatt
     3841 tttaagtaat ttacctgtta aaagtatata aaaaagagac ctcggaaaat ttccggggtc
     3901 tcctttaatt agtctttata aattgatttc gttcggttaa gccaagcata gccgagtccg
     3961 ataacaaggc ctccacctac aaaattccca agtaaagcaa gtactaaatt gacggtcaca
     4021 ttgcccgctg tcattgcagc aagtgttcca ccagaagcga aaaatgctaa tgagaaagag
     4081 gagaagttgg cgataacgtg ctcaaatcct aagaatgcaa agatgaaaat aatgaaaatc
     4141 atcgcaatga ctttaccagc atcatctttc attcgaagtg tacaaagcac ggccgtattt
     4201 acaacaatat tggcgaaaat accttctaca aaaatttgta gtggcgcttt ttcaagctta
     4261 ccgctaacag cagtaaataa gaaatggtca gcaggtaaat tatggaaaac ggatgttagg
     4321 gaaactaagt acccggcaag aattccaccc aataaattac aaacaataca taaaagcaaa
     4381 atttgtaatg cttttcctgg tttaacaatt ttttgataaa caccagttgt catatacatc
     4441 atgttagaag taccaagctc agcattcata taaataatca taacgagcga ccaactaaac
     4501 ataaatgcat acgtgatttt accaagtcct ggagcgaaat gatcaacttt atcaccaatc
     4561 attacagcga ccgcagtccc tagtgtcaag aataaacatg ctaacatcgc gcgcacgata
     4621 taacgaagaa tactattatt tactaaatca atttttttgc gcgtactata atcaattttc
     4681 tgcattaatg gactactttc cacatccaaa ttatttcatc tccaaacaaa aaattttctt
     4741 gtgaaattca caacttgttt attgtagcat gtttttaatt tgatgcaaat agttttcaga
     4801 aaataaaaat gagttaagcg ttaccatctt gaattttttt ctatctgggt gttttatgtt
     4861 gttaatttcc ccgttttcac actcttaaaa cacaaaaaac gagaacagat ttctctgtcc
     4921 tcgtttgaaa tatttttatt tactaaacca atgtttttta gcagaatctt ttgcttttcc
     4981 ttctgtttct tgtgcgcttt tgatttcttg agctacgata gcttcatcca tacgttgcac
     5041 acgcccgtgt aactcatcca ttgctacgtc gtttacattt gctaattctt gttctgtcgc
     5101 aataaggatg acacctgtag aaccttctgg aattgttttt aatgttcttt caaatacatt
     5161 taaagcatct ttcacttcgc cagcatctcg catggaacca acgattgcgc cgaccatcca
     5221 accaattaaa ataccaaatg gaccgcctaa aataccaatt aacataccaa taaggctatc
     5281 tttcatattt ttatcggcac cagtaaaatc aagaaaatct tgtgcaacaa gtttatttcc
     5341 tggctcatgt tttacaaccg ccatttgata accaatgatt ttgcgttctt ggtgtaatct
     5401 tttcatttca gaaaaagctt ggtaagaaat gctttcttca tcgaaattca taattaacac
     5461 tgttttttct tttttcatct gttgtacccc tctcgcctca taaagtatta tattcagata
     5521 ctatttatcg tacctatctt tcattttact cgctctctca tgtaaatagc aattaatagc
     5581 aatgtcaaga taaaataact actttttaca gacctttttt accaataaaa gggaaaaatt
     5641 ttgacgtttt gttcgcatat gcttgaaaat ccgctctgtc ttgatatttt ttttcaagta
     5701 acggaacacc ggaaacaaat agtaataata aagtgataac aatcgggcta gtaatcagcc
     5761 agagatcatt taattgcgta taggcaacta aaaatacacc ccaccaacta agtgcttcac
     5821 caaaataatt tggatgccgt gtgactgacc aaaatccagt tgttaataat ttgcctttat
     5881 tggctggatt tttcttgaag ttttctaatt gcaaatcgcc accgacttca aaaataaagc
     5941 caataatcca gataacaata ccgaggattt gccaccaagc gaatgtcgct gtttcattag
     6001 caaaactatg tgtaatcggt aaagcaataa taaataataa aacaccttgc aacacgaaga
     6061 catttaagaa ggctttcaaa ttaactaatg tcgttcccca gcgtttgcgc atattaacgt
     6121 agcgataatc ttctggtttg ttccaattcc ggcgcgctaa atgccaaaac aaacggacac
     6181 cccaaatcgt cactaaaaca agtatggtta tactttgcgc tgtcatgcta aatgtcgtta
     6241 aaaatccagt ccatgctaca acaacgaagc cgccgcccca cgcaatatca acgagcgaat
     6301 attttccttt tatttttgaa ataataaacc agagtataaa gtaaacaagt aaagcgagtg
     6361 ttactgtcca atacatcata tcgtttcctc ctttttaatc cccgcaactg cgacacttcc
     6421 gagtccagca ctaatcgcaa tggctgccga actatccact aagtagctga tttcccccgt
     6481 ttctttttca agttgcttct gccaaattgc cgcggtgtct cttgaagaaa catgtgtaat
     6541 cgccagctct ttcagctgta attttgctat ttttttaatg atttttttca tactttgctt
     6601 ttggctaaac gatacgccta tcaatttgcc atccccggac tcgtccaaac tcacaatcgg
     6661 atagagtgat aatttctgcg caagctttcc taacactcgt ggaattctgc cagactggac
     6721 catcggcgac aaatctgcaa ccgccacata aataaaggtc cgctcaatca tttgttccac
     6781 ttcgggataa atagattccc atgatttacc tgattccact agttctactg cttgtttcac
     6841 taaaattcct tgcgcgaccg aatttaattt agaatcaatt acacgtatcc agtccgagga
     6901 caactcccgc gcttttatcc gctgtttgat taattgataa gttccgctta atttcgccgc
     6961 aacggagata acaagcacat gttcatattt gtgttctaaa aaagataaca aggcatccac
     7021 cgtacggatt gttggctggg ctgtactcat tttcgtttgt tttcttaatt tttcttgcat
     7081 catgtttggg ccaaccgtca atttatcaag aaaattctct tctccagcta aaatattcat
     7141 cggtaataca tgtacttggt gttccagtaa aaatgcttct ggtaaatcgg ctatcgaatc
     7201 ggtcactata gcaatctttg cgcgaggctt ttttgtgact tcatattgca gacgcatatc
     7261 atctactttt tgatacgtca tcacgccgta tgctgccatg aggcttaaaa cttcttttgg
     7321 ttcatttgtg tggatatgga tttttatttg tttctcatta cctgcaatta ctaaggaatc
     7381 ccctttagct gcgagaattt cctgtaaatg ttgatgtgaa atagtcgctt gtttgataat
     7441 aaattccgag caataacgat atttcggctc gcttgtttca acatgcctat gttccgctgt
     7501 ttgctctact tccgtaaaac gaacggggtc agaaaccgcc ttaccacaat aagcatttgt
     7561 aagcccggtg ataaagtaat aaaacccttt cgcaccagaa tccaccaacc ggtttttccg
     7621 taaaattggc atttgaaatt cggtattaat taatgctttc tccgcaacta tttgtgcatt
     7681 taaaagcgat tgctggaaag aacgctcctg ctcatacgtc ccagcaagct cctctgacca
     7741 agccttcatc acagacaaaa tagtcccttc ttttggatcc aacaaggctt cataagcttt
     7801 atgcaccgca ttttgaaacg cttgaactaa tccatcaaaa gtcgattcaa ggtggtgata
     7861 actttccgca acagcattta agtattgcgc aaaaatcatc cctgaattgc cacgagcacc
     7921 gatgagcgcc gcgctagcta cttcctctag caattccttc gttgaatatt ctctcgggga
     7981 aacatgatca atgatcgctt gcattaaaga agctaaatta ctacccgtgt cgccatccgc
     8041 tacaggaaaa acatttattc gattaagctc gtctttttta ctaattactt cagccgcccc
     8101 gtttagcata ctttgtaata gacgtttgct ttctgactcc atcattagga acctgctccc
     8161 gagaagaaat gcagattaat aaagtaaaca atcactgaag tcacagttgt cacagccgtt
     8221 ccccaaacga gatcaataat ggtcatcgta atcggccaat ctttaagtgt cgccaagttc
     8281 gtcaaatcat acgtcgcata acaaactaga ccaaacaacg cgcctgctaa aatggtgtaa
     8341 cctaaacttc ctttttctgt cccaggaagt aaaacgaaga aggtaacacc aacgacataa
     8401 ataaagtaaa aaataactgc tggagcaagt tttacatccc ccattaaatc cccaataaat
     8461 tgttgataca tttttttaga agctacgagt aaccaaaaaa gatcaaaaat caagaaaact
     8521 actgcactcg ttagaaatag ctttaaaaat tgcgccattg tgattccccc ttatcacttg
     8581 ataaatgaat tttaacatac ccaggttctt actcctagaa ggttgctcaa gacttattct
     8641 ttgtgaatac tgccacaaaa aaatcaatca tttaattaaa tgattgactc attatctata
     8701 tatttcccct agaatgctct ttgctaaact cgtagcgtgc aatggctaat ttccgtcgtt
     8761 ctttatggtc aactatcgga aatggatagt cttttcctaa cagcaagcca tgctctttct
     8821 gctcagtttc tgacattttt tctggttgat gaatatattt atcaggtaga ttcgctaact
     8881 cttttacata ttttcgaata aatttcccag tcgaatcaaa tttttgtgat tgtgtcgttg
     8941 ggttgaaaat cctaaagtat ggcaccgcat ccgttccagt cgaagccgcc cattgccagc
     9001 caccaatatt actcgcagga tcataatcaa tcagcatttg ttgaaaatac ttttcgccaa
     9061 aacgccaatc aatcagcaaa tcttttgtta aaaaggacgc cgtaatcatt cttagtcgat
     9121 tatgcatcca accagtttct ttcaactggc gcatcgccgc atcaacgagc gggaaaccag
     9181 tcttcccttc ttgccacgct ttgaaatatt cacggttatt ttcccattca ataaaacgat
     9241 aattttcttg gatcggctcg tttttttggt taggaaaaga aacgtaaatc atattataaa
     9301 agtcgcgcca acaaagttct ttttcaaatg tagctcgtcc ttctgttgct tctgtttctt
     9361 gaagtgtctg ccaaatcgtc cgaatcgaga tttcccccgt tcgtaaataa cgtgataaat
     9421 ggcttgtttt atccagttcc gggaaatctc tcgctttgtc atagtcagca acatcgtgtt
     9481 taataaaatt cgcaagtctc gtgttcgctg ctcgttcacc aatatctaat atcggtaaat
     9541 cgctagtcat ttccgcaaat tgttcttcat atttcagaaa caagctttct ttccggatat
     9601 tctcatgctt taaagtcact ttgaacggcg tttcttttat ttcttcgcgc cattttttat
     9661 aataaggggt aaaaatttta tagtattctg ttggagattt ctttacttct tccgctgaat
     9721 gaagatagct atcgtggaag gcttgaacct cgattttttg ttcgtcaaag aacgcttgcg
     9781 ccgcctcatc ccgctttgct ccgtatcctg tttcatcacg gttgaaataa actttatccc
     9841 agcttggtag cgaatcttta agttgttgga agcattctat cggttcacca aacatgattt
     9901 gtaaatgcgc agttttatcg atttcttgct taaaatgagc cacacttgca aaaaaagctt
     9961 ggtggctagg acttcctgtg atgaactgtg ctggatttac ttgaaataac aaaagcaaat
    10021 cgtcctcttt acaagcatga tagagagctt tattatcgtt tactcgaaga tctctccgaa
    10081 accacattac cgaagtcatt ttcttccacc tttcgcaaat tacttaacgc tattatacga
    10141 gaaactagtg tatttagaaa acaatgggct tataacatga aaaaacctgt taacttttgc
    10201 taacaggttt ttacggagca tccgtcaaag tccactcgat tgttgtttca tagctttcat
    10261 ccacataagc ctccgctgca tcaacttcta ccaaaatccc ttggtcttct gcccattcta
    10321 tcggaacaat catctcacta gctgactgcg attcaaaaat ggtgattggt tcagcggaaa
    10381 gaattttttt cgctccagta ttatcaataa aaatgagccc atttggcaaa gtatgcgccg
    10441 aatttatcgt ggatgtcagc ggtgttttaa cggttgctgt tacgctaaat ttgccgcctg
    10501 agcctcttga atcaagcaca gataaatcaa agtcagcgtt tcgttttgcg atattttttt
    10561 gttgattaag ctccattgtt tcgaaggaaa tcgtttctgg cacatgatta aatttaagct
    10621 cacccgtaac ctgaatcgca atctctttcg ttaatccgtc aatttgtatc gttgccgcat
    10681 aggtgcctgt ctcttttttc aaattggtgc tagctacttt caactccgcg cttaagtcct
    10741 caccagtttc gatattgaaa gcttttgcac ccgatttgct taaaatgaat tgctccagtt
    10801 cggcatcatt gagctcgata atatctttta catttaccga aaagtccgcc gctcgtaatg
    10861 ctttgccatc ttgtatctct gtttcatcat ctttaataaa aacgggtaca cggatatcca
    10921 cgtaattttg tgccttatct tctaagcgaa caatggcttc tgtgggtcca aatacattag
    10981 tatcgggcgc gctttgtaaa gtagttgtaa ctcccgctcc agatgtatta tcggaatgat
    11041 cataaatatt tgttactaat tcggctacat ctggaaaggg atctccaagt tggataattt
    11101 gagtaacagc ctcaccactt ggcggagtca catcttctac agttatatcg tctaatgtta
    11161 tccttttttg gtcttgttta atggttgtag tcaatttaat gtaaggcttg ataaaaccgt
    11221 ttggaatagc aattcgataa gttcccgcct catttgcctg tccttctaaa accttatttt
    11281 ccccattttc tgtgtatgaa atacttataa aagcgtttgg tgtcgctgtt cctgtaattt
    11341 cattatctgc gtctgtcaca ggatttatcg ttccttcaag tcgccccatt gcaatcattc
    11401 gcgcggtgtt ttgattaaaa ttagtcggcg tcatccccgc attcgttgac agaatttttg
    11461 tcgttgtccc agtgtacgtc aaactccccg tcacattttc cccatttggt aaactaaaac
    11521 tttgcgctgc caaatccgtt cgatcaatgg ttccaaccgt atcccagtaa ttcaccattt
    11581 gcgcatttaa attaaaggtg ttcgcataag gccagtaaaa catcggcgta tttgaatttg
    11641 tcgtaattaa aaagctccga ggatcattta tatctaactt cgccgtcgca ttataaaact
    11701 ggataatata gccagttccg cctgttttat tcaagataaa gcgggcatca ggacttacgg
    11761 taatatcatc tgccacccat agaagtggat tcccgccagc agtttttgtc atagttacat
    11821 ccgcacctga cgcgatttta acagctccgc ccggcgtgtc tcggaaaata ttattgttag
    11881 aagtaatagc taacttcgca ttctttttca catctatatc aattggtttt gtccctgaac
    11941 gataaaacat cccagtccca ttagaaagta tcgtcacctc tgcattttct tccactgtaa
    12001 aagtgtttac ctcagccgtt ccaccaccga accaaaaagc actattcgca ttcgaacttg
    12061 cgtgattgat attcaactta ccggaaacgc tcacgccttt aatttccgcg acttcatttg
    12121 gtgccgcaga accagataca acggacgcta ttgttatatc attggttcct ttaaaattcg
    12181 ccgttccatt caaattatat atcatttgcg gaccttgata gtgaacattt tcatagtttt
    12241 gtacgacgtt ttttgcagcc ccataaaccg aaatcgtccc ataataattt ttccccacaa
    12301 cattaatatc tcttaaagtt gtctcttttg cacctgtgtt ggtattaact gtaatcacgc
    12361 tgctctgggc accagctgat gccattgttt ctgtcaaagt atgtatttca cctgttgctg
    12421 gattttttcc tgataaagta aatgtctttt tcgtcgctgg gatgataatt ccacccgata
    12481 attcaacatc tgcacctaaa tacactgtat ctattccatt atcttcggaa atagctgttt
    12541 ttaattctgt aaaattagtc actatcgctt catttgatgc taagtcccta ctcccatttt
    12601 ccgctgctac cactatttta aaaccaagaa aaagagccgc aatggtcaat acaagtatta
    12661 attttttgaa agccaattcg ccagctcctt tctttatttt tcttgttttt gtcttcgttt
    12721 tcttataacc aaaatgatga ttagtgctat aagaaccaca cctgcaacaa tcgcaacgta
    12781 aagccatgtg ttcgttttct ctaggtttac tgcttcttta tttaagtttt gtccttcttt
    12841 accaatggtg aacgcttcgt cccaagtcca ggtttccacg ccattcgttg cagtcatttt
    12901 taatctgtat ttaccttctt ttaaaggttg attttccaag tcaatcccaa aatcaaaatt
    12961 ggaatttggc gccattttca tattcgcttt ctttgtttgg taaagtaatt tatccgaatt
    13021 ttgttgatag acttttgcat caatacttag attttccagt atgactggtt ggtcgttctg
    13081 taatttggca actatcgctg tgtgatagtt aaggagtgcc ggtttgatac ttagtaaatt
    13141 catatgtggt ttgacttgtt tgtcggtttc agctagttgc atgccgacaa tataggaata
    13201 ttcatttttt aaggagacac cttttgtttt tttcgtctcg ttagtatttt tctttttaaa
    13261 ttctactgcg cccaatacaa cgccatcaat cgattcagca ggcatttcaa tcatcacttg
    13321 gacggtcttt ttgccatcta ctggtatcgt taggagtttt tggtcgtctg gaattttagc
    13381 tagttctgga agtggatatt ctaaactttt atcttttttc gtaagatcat ttttggtgta
    13441 atcaatgaca ccagttcgat tggtggatgc gtagttgatt gctgcttcca cttgaatttc
    13501 ttcatttgaa ctattcatta catcaatgtt tactgtttgt ttttgtttcg gctgcatttt
    13561 taggtcaaaa taagtttgtc ttttatctat ttgattggcg gggatatgag cttgaacgga
    13621 ataaccgacg tctccttctg ccgcctgtgc ttctgcaaaa ttgctacatg taactaataa
    13681 cggaataatg aacaataaac taagaaaact tttcttcaat taaaccttcc ttccatcgtt
    13741 tttaataaaa atttgcgtct agaagtgaat tctaaacgca aattttttaa actcctggcg
    13801 cgtcagataa tgtccatgta atagtcgctt catggtctcc aagtgttgcg cttcctgctg
    13861 gtatcgttaa ttgaacattg ttgtttaaac tagctgtatc attcggtgta gcaccaaacc
    13921 aacgattaat ccatgttccc atgccttccg attcttttgc cgaaacaaca ctcacaatcg
    13981 aagttccatc tgttggtaat tcaactgttt gagcagcagt tggtgtcgtt gctgtgttgc
    14041 tagcagatgc tgtttctccg tttttaaatg atagtgtcgc tcctgatagg gaagctgcac
    14101 cgtcttcatt ttgaaaagcg gttgcggttg ctgtcacttt ccaaccagct ccagttccac
    14161 gacggtcaga tatttggata aacggttttc ttgatgtgga ggagtagctt tgttccgtgg
    14221 atgatacttc atgttctcca aaattaacag atgacacata atccaatgtt aaagaaccag
    14281 tatttccagt tccaggatca gttggattac ttggatctag cgggtcaatc ggtttcgttg
    14341 gattttccgg gtcaaccggg ttaactactc ccgtcccagc tttaaattta actgttgctt
    14401 ttgaatctcc ctcagaagtt actgcaaaag cagccggtgc aaaaagtgtg actgaactta
    14461 tgccaattaa tcctacaatt aatgtttttt tgataatcaa tttttgtttc ccctttcctc
    14521 atacactggc ttcatattat gatgaaaaat gcgtcaattc aatgtacaat ttattaaaaa
    14581 agagaaaaaa attatattat aaatctattt tcgtaatata tattacataa aaatcgcact
    14641 attactactc tcaccttgta aagagaaaaa ttatgtcttt ttt
//
LOCUS       DASDYK010000065        14676 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.065, whole genome shotgun sequence.
ACCESSION   DASDYK010000065 DASDYK010000000
VERSION     DASDYK010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14676)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14676)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14676
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.065"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..314)
                     /locus_tag="U0308_001892"
     CDS             complement(<1..314)
                     /locus_tag="U0308_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HEM2316854.1"
                     /translation="MRKFILYWALYGLIELIMYVWLFQVIGFWPLLFIQAASSAFGVF
                     IFKRLGGNLFRNLRDGRTVAPYLLDSLCFFIAGFLLIIPGVITTILGLLIFIPFSRKL
                     LKP"
     gene            complement(433..2190)
                     /gene="pyk"
                     /locus_tag="U0308_001893"
     CDS             complement(433..2190)
                     /gene="pyk"
                     /locus_tag="U0308_001893"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEM2316855.1"
                     /translation="MKKTKIVCTIGPASESVDTLVQLIEAGMNVARLNFSHGDFEEHG
                     ARIVNIREASKKTGKQVAILLDTKGPEIRTNDMVGGKLEFQTGDVVRVSMTPVEGTKE
                     KFSVTYGELYDDVEIGSSILLDDGLIGLEVIEKDEANRELVTKVLNPGVLKNKKGVNV
                     PNVSINLPGITEKDAADIRFGLEQGIDFIAASFVRRATDVLEITKILEEHNATHVQII
                     PKIENQEGVDNIDEILQVSQGLMVARGDLGVEIPAEEVPIVQKELIRKCNKLGKPVIT
                     ATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGDYPVEAVKMMAKIAVR
                     TEEVLVAQDKFALKLHENTDMTEAIGQAVGHTAKNLNVQTIVAATQSGHTARMISKYR
                     PKSHIVAVTFNEHVYRGLALSWGVYPRLATPVSNTDEMFDLAVKESLASGVAKQGDLI
                     IITAGVPVTESGTTNVMKIQLIGEKVVKGQGIGSKSVIGKAIVAKSNAEALEKAEEGG
                     ILIVKTTDKEMLPAFEKSAAVVVEEGGLTSHAAVVGINLGIPVIVGAKDATSLVKDGE
                     IITVDSRQGVVYNGKTATH"
     gene            complement(2473..3432)
                     /gene="pfkA"
                     /locus_tag="U0308_001894"
     CDS             complement(2473..3432)
                     /gene="pfkA"
                     /locus_tag="U0308_001894"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HEM2316856.1"
                     /translation="MKRIAILTSGGDAPGMNAATRAVVRKAIYEGLEVYGINYGFLGL
                     VNGDIRKLELGSVGDLLHRGGTFLYSARYPEFATEEGQLKGIEQLKKHQIDGLVVIGG
                     DGSYHGAEALTKRGFPTIGIPGTIDNDISGTDFTIGFDTALNTVLDALDKIRDTATSH
                     ERTFIIEVMGRDAGDIALWSGLAGGAEAIIVPEESFNMDDVVDRLNKGRERGKKHSII
                     VVAEGVMSGNEFAKQLAEYGDYHARVTVLGHVQRGGSPTAFDRVLASRLGARSVELLL
                     ENRGGLAVGIRENRIVENDISEILKEKHTLDQKLFDLASILSI"
     gene            complement(3717..4673)
                     /locus_tag="U0308_001895"
     CDS             complement(3717..4673)
                     /locus_tag="U0308_001895"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEM2316857.1"
                     /translation="MANEMEFEKPILELKSKIADLKEYNETSDVDLTNEIEKLEKRLA
                     KLESSIYSNMTAWDKFQVARHPERPTTLDYISLLFEDFMELHGDRAFGDDAAIVGGIA
                     TFHGIPVTVIGHQRGKDTKDNLHRNFGMPHPEGFRKALRLMKQADKFGRPIICFIDTK
                     GAYPGRAAEERGQSEAIARNLYEMSDMKVPIISIVIGEGGSGGALALGVGNQIFMLEN
                     AVFSVISPEGAAAILWKDASQAKKAAESMRITAGDLFELGITDGIIPEVKGGAHRDLN
                     AQAEEINKTITKSLHALMAFSEEQLIEQRYEKFKKIGVYDTL"
     gene            complement(4663..5547)
                     /locus_tag="U0308_001896"
     CDS             complement(4663..5547)
                     /locus_tag="U0308_001896"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEM2316858.1"
                     /translation="MLGDLFTKPKKRKYATIPSDGTKADVPEGIMTKCPECKKIMYTK
                     ELQKNLMVCNYCGFHHPIGAKARIDMLVDEGSFEEIDASLTTANPLGFEDYMDRIEKD
                     KQKSGLNEAIVTGHATIDGNPLVIAVMDSRFRMASMGSVVGEKIFRAVEDADKTNKPF
                     VIFTASGGARMQEGMLSLMQMAKTSAAFKRFSNHGGLIITVMTHPTTGGVSASFASLG
                     DYNFAEPGALIGFAGRRVIEQTVREELPEDFQTSEFLLKHGQLDDCISRLDLQNKLSF
                     ILSIHVKTPEVGGEADGE"
     gene            complement(5765..9091)
                     /gene="dnaE"
                     /locus_tag="U0308_001897"
     CDS             complement(5765..9091)
                     /gene="dnaE"
                     /locus_tag="U0308_001897"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEM2316859.1"
                     /translation="MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVL
                     YGVVEFYQKCLAADIKPIIGMTVTIQGYLNPINSYELILIAESTAGYHELLKIASAIQ
                     TREEGPELPQSWLRAYSSNLIAISPGAKGEIERLLMEENREGALEVYANLVEIFGKES
                     VYLSAQKENPRLFTKIETFSAEENVPVVATKNVQYIEPKDAQAKEVLTAIRDNRTVDW
                     TTLPLAGPNYFTSQEDMERDWQTEFEKRACLETGELADRCHVEIALDQHLLPRFPLNE
                     GQNASDVLRQTAFAGLKERNLLGVEYQERLEYELKVITEMGFADYFLIVWDVIRYSRE
                     AGILTGPGRGSAAGSLVSYALRITDVDPIRYNLLFERFLNPERITMPDIDLDFPDNRR
                     DEVISYVVSKYGEAHVAQIGTFGTLAAKAAIRDTARSFGLNSVLLSEWSKLIPSQLGI
                     TLQKALQESPRLENHIKSSKENEMIWEVACQLEGLPRHISTHAAGIVISDKPLVEQVA
                     LQLGSGDARLTQFAMGELEKIGLLKMDFLGLRNLSLLDRVLKSVNYTRETPLTLADIS
                     LEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLKPTSFEDVVAVDALYRPGPMEQIDT
                     FIARKHGKEKIQYPHPDLAPILEVTYGVIVYQEQIIQVANQMAGFSLGEADLLRRAVS
                     KKKADVLNEERIHFVEGAKSRGYSDASANQVYDMIVQFANYGFNRSHAAAYSKIAFQL
                     AYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISMLAPSINHSNYYFQVENES
                     SIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHKMLSETVLEALVFSGCF
                     DEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDDFLKKMKPRYRKTAPISIDE
                     KLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGKNYQVAAYVHEVKSIRTKK
                     GETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADTRNGELQLIINKA
                     EDLKEIKAPVRLFLKLTEPQQMEQIKPVLTRYKGDSKVIVHQAITKQTAELKNIQVTP
                     SNELQEALEELLGKENVVIK"
     gene            complement(9213..10148)
                     /locus_tag="U0308_001898"
     CDS             complement(9213..10148)
                     /locus_tag="U0308_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional oligoribonuclease/PAP phosphatase
                     NrnA"
                     /protein_id="HEM2316860.1"
                     /translation="MKSEILQQIKQYETIILHRHVRPDPDAYGSQMGLAEIIRASFPE
                     KKVYSVGNDEKSLQFLGIVDEITDEIYKDALVIVCDTANQERISDGRFNLGKALIKID
                     HHPNDDAYGDLLWVDTTASSCSEMIVAFWEMFSDELILNETAARLLYAGIVGDTGRFL
                     YPSTTEETLRLSAHLVTFPFDRPALYRELYELPKNTVKLSGYILQNFVMDENGAATVY
                     LSDTLLNEFEVDPRDASALVSCIENVEGIKAWIMFIQEGPVFRARLRSKGPVINELAK
                     EYGGGGHPLASGATLHNEEEIKEMTAKLQRICADK"
     gene            complement(10169..11482)
                     /locus_tag="U0308_001899"
     CDS             complement(10169..11482)
                     /locus_tag="U0308_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEM2316861.1"
                     /translation="MATKHEQILKYIENLAVGEKISVRKIAKNLSVSEGTAYRAIKDA
                     EIIGFVSTIKRVGTLRIERKQKDSIEKLTFAEIVNMIDGQVLGGRAGLYKSLNKFVIG
                     AMTVEAMERYTDAGNLLIVGNRVSAHELALKRGAAVLITGGFDTDDEVKRLADEKELP
                     ILSTSYDTFTVATMINRAIYDQLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEE
                     ATGHSRFPVVNRAMRLTGMVTSKDILEKNPSISIERVMTKNPLTVGPKMSVASVAHMM
                     IWESIEVIPVVKDDLTLIGIVSRQDILKSMQMIQKQPQVGETIDDTIANQLSEKADTG
                     EEADYEFKVSPQMTNSLGTLSYGVFTQVVCDVVQQKLFSMKKRNVAIENVTMYFLKPV
                     QMDATIIIKPRILEMGRKAGKLDVELYLEGILTGKAIVACQMMER"
     gene            complement(11508..12194)
                     /locus_tag="U0308_001900"
     CDS             complement(11508..12194)
                     /locus_tag="U0308_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEM2316862.1"
                     /translation="MKISFHGQSCIKIITGDTTILVDPFISGNEKCDLKAEEQMPDFI
                     VLSHGHDDHVGDTVEIAKNSGATVICNADLASFLAVEDGLENIAPMHIGGKRQFSFGQ
                     VKLTQAFHGSQTVRDGRIVNLGFPTGIVFTIEDKNIYFAGDTGLFSDMKLIGELNPLD
                     VAFLPIGDNFTMGPEDAAIAARFLQAKLVVPMHYNTFPLIAQDPHKFVASLDEGITGK
                     VLEIGEGIEI"
     gene            12359..13456
                     /locus_tag="U0308_001901"
     CDS             12359..13456
                     /locus_tag="U0308_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEM2316863.1"
                     /translation="MEKNIDVLQNWLKDQGAEVAFLTDPENIAYFSGYHSEPHERVLG
                     LAVFPDSEPFLFTPALEVEDVRGGDWTHPAYGYNDTENPFTIIADEIKKRVANPSKFA
                     IEKKHMSVDRYEQLGGLFSGSSFIPIEHKIEQIRLIKTEAELKILKEAALLADYAVQV
                     GVNEIAEGKTEAEIVAKIEYEMKKKGVTAMSFDTMVLTGKNGALPHGTPGETKIKKGD
                     LVLFDLGVVHKGYCSDITRTVAFGDISDEQKKIYDTVLEAQIAAVEKVKDGVKASEID
                     LTARNIIREAGYGDYFPHRLGHGLGASVHEFPSITETNNMELQENMVFTIEPGIYVPG
                     VAGVRIEDDLVVTKDGVQVLTEFPKTLQVID"
     gene            complement(13499..14611)
                     /gene="ald"
                     /locus_tag="U0308_001902"
     CDS             complement(13499..14611)
                     /gene="ald"
                     /locus_tag="U0308_001902"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HEM2316864.1"
                     /translation="MLVGVPKEIKNNENRVAMTPASVFSYVNAGHTVYVEKDAGIGSN
                     YQDADFVQAGAKIVETAKEAWDVDMVVKVKEPIASEYTYFKEGLLLFTYLHLANEPTL
                     AKALMESKVNSVAYETVELADHTLPLLSPMSEVAGRMAAQIGAQFLQRTNGGMGVLLG
                     GVPGVEKSEVVIIGGGIAGTNAAKIAAGLGANVTILDMNLKRLRELDDIFGNQVQTLM
                     SNDFNIETAVKKADLVIGAVLIPGAKAPKLVKEHVIKQMIPGSVLVDIAIDQGGIFET
                     TDHVSTHDNPTYEKYGVLHYAVANMPGAVPRTSTLALTNATLPFGLKLANQGLKAAVQ
                     NDPFLLRGLNTYQGHITYKAVADSLDLPYTDSKELI"
BASE COUNT         4291 a         3212 c         2527 g         4646 t
ORIGIN      
        1 ggttttaata gtttgcggga aaatggaata aaaatgagta gtccaagtat agttgttata
       61 acacctggaa taattaataa aaacccggcg ataaaaaagc acagactatc caacaaatac
      121 ggggctacag tgcggccatc tcgtaaattt cggaaaaggt tgccaccaag ccgtttgaaa
      181 ataaaaacac caaaggcact tgaagctgcc tgaataaaaa gaagtggcca aaagccaatt
      241 acttggaata accaaacgta cataatcaat tctattaagc catataaagc ccaataaaga
      301 ataaattttc tcataaaatc aactccaata cttactctct attataacct attttggcgt
      361 aatcgaaaaa caatacaggc gtgcgcataa aaaaagcgtc ccgcatgcgg gacgctttta
      421 gaaagttaac tattaatgtg ttgctgtttt gccgttatat acaacacctt gacgagaatc
      481 aacagtaatg atttcaccgt cttttacaag agatgttgca tctttagcgc caacgatgac
      541 aggaatgcct aggttgattc ctacaactgc tgcgtggcta gtcaagccgc cttcttccac
      601 aacaactgct gcacttttct cgaatgcagg tagcatttct ttatccgttg ttttaacgat
      661 taagattccg ccttcttctg ctttttcaag tgcttctgca ttggatttag caacgattgc
      721 tttaccgata acagatttgc tgccaatacc ttggccttta acaacttttt caccaattaa
      781 ttggattttc attacgtttg ttgttccact ttcagtaact ggaacaccag cagtgatgat
      841 aattaagtcg ccttgttttg caacgccaga agcaagagat tctttcactg caaggtcgaa
      901 catttcatct gtgttgctaa ctggagtagc taggcgagga taaacacccc atgaaagtgc
      961 taaaccgcgg tatacatgct cgttgaatgt tacagcaacg atatgagatt taggacggta
     1021 tttagagatc atacgcgctg tgtgaccact ttgagtcgca gcaacaatag tttgtacatt
     1081 taggtttttc gcagtatggc caactgcttg accgatagct tctgtcatat ccgtattttc
     1141 gtgaagttta agtgcaaatt tatcttgagc aactagtact tcttctgtac gaacagcgat
     1201 tttcgccatc attttaactg cttctactgg ataatcccca gcagctgttt caccggacaa
     1261 cataattgca tctgttccat caaaaatcgc attcgctacg tcacttgctt cagcgcgagt
     1321 tggacgtggg ttacgttgca tggaatcaag catttgtgtt gcagtaataa caggtttacc
     1381 aagtttatta cattttctga taagttcttt ttgtacaatc ggaacttctt cagctggaat
     1441 ttcaacacca aggtccccac gagcaaccat taggccttga gatacttgta agatttcgtc
     1501 gatattatca acgccttctt ggttttcgat tttaggaatg atttgtacgt gagttgcatt
     1561 gtgctcttct agaattttag tgatttcaag aacatctgta gcacgacgta cgaaagatgc
     1621 agcgataaaa tcaatacctt gttctaaacc aaagcggata tcagcagcat ctttttctgt
     1681 gattcctggt aggttgatag aaacgtttgg tacgttaaca ccttttttat ttttaagtac
     1741 acctgggtta agtacttttg ttactagttc gcgattagct tcgtcttttt cgattacttc
     1801 aagaccgatt aagccgtcat caagtaaaat ggaagaacca atttctacat catcgtaaag
     1861 ttcgccgtaa gtcacggaga atttttcttt tgttccttca acaggagtca tagaaacacg
     1921 tacaacatca cctgtttgga attctaattt tccgccgacc atgtcgtttg tacggatttc
     1981 tggacctttt gtatcaagta agatagccac ttgtttacca gtttttttcg atgcttcgcg
     2041 gatatttaca atacgcgcac cgtgctcttc aaaatctccg tgagagaaat taagacgtgc
     2101 aacgttcatt cctgcttcga tcaactgaac taatgtgtca actgactcac ttgcaggacc
     2161 aattgtacaa acaattttcg tttttttcat gttattactc ctcctagaac ttagctattc
     2221 attcgtattt attataaaca tatcttccac attttaccag taacaacctt gtaaaacaag
     2281 taagtttgtg aataaaatcg caatcaacct gcatggtaac gataacaaga aaacgttttc
     2341 cagattgtta cagcatgctt aatgaacgat ttgcatttct ttaccctcaa agtttatttt
     2401 taatacgtta ctaaaatttt tcacaaagaa aggctaccat gctttgtcat ggcagccagc
     2461 tcttcagccg ttttaaatcg acaaaataga tgctagatca aataattttt gatcaagtgt
     2521 gtgtttttct ttcaaaattt cactaatgtc attttcgaca attctatttt cacggattcc
     2581 aacagctaat cctccgcggt tttctaacaa taattctact gaacgtgcac caagacggct
     2641 tgcaagtaca cggtcaaatg cagttgggct accaccacgt tgaacgtgtc caagaacagt
     2701 tacacgtgca tgataatcgc catattcagc taattgttta gcgaattcat taccggacat
     2761 tacgccctca gcaacgacga taatactatg ttttttacca cgttcgcgac ctttgttcaa
     2821 acgatccacg acatcatcca tattaaaact ttcttctgga acgatgatag cttcagcacc
     2881 accagcaagt ccagaccaaa gagcgatatc accagcgtca cgtcccataa cttcaataat
     2941 gaaagtacgt tcatgacttg tagctgtatc gcggatttta tcaagtgcat caagaacagt
     3001 gtttaacgct gtatcaaaac caatagtaaa atcagttcca gaaatatcat tatcaatagt
     3061 tcctgggata ccaatagttg ggaatccacg ttttgtaagt gcttccgctc cgtgataaga
     3121 accatctcca ccaataacca caaggccatc gatttgatgt tttttcaatt gttcaattcc
     3181 tttaagttgt ccttcttctg tagcgaattc aggatatctt gcggaataaa ggaatgtacc
     3241 tccgcggtga agtaaatcac caacagaacc taattctagt ttacgaatat caccattgac
     3301 tagccctaaa aagccatagt taataccgta aacttcaagt ccttcataga ttgctttccg
     3361 tacaacagca cgagtggctg cattcattcc tggagcgtct cctccacttg ttaaaattgc
     3421 aattcgtttc attttactta ccacctcaga caatgatatt gtttttcatc acatgtgttt
     3481 attctacatg aaaaaaggtc aaatgaaaag cttcaacaga gcactttttt aaacgagaag
     3541 ctttgtaaat cgccatttta aatatcggtc tattccgatt cgtacgaaaa acggctttat
     3601 agcttaaata aacataattg gtctatactt gtgaatgggt aaactttctt tttagcgttt
     3661 ggcatatacc aaagaagcgg atctcctaaa attaggaaag ccgcttcttt tattgtttat
     3721 aaagtatcgt atacaccgat tttcttgaat ttttcataac gctgttctat taattgttct
     3781 tcagaaaatg ccattagtgc atgtaaagac ttcgtgatag ttttgttaat ttcttcggct
     3841 tgtgcattta aatctcggtg cgcaccgcct tttacttctg gaataattcc atctgtaatg
     3901 ccaagttcaa ataaatcgcc agctgtaatc cgcatagact ctgctgcttt cttcgcttga
     3961 ctggcatctt tccataaaat agctgctgct ccttctggtg aaataacaga gaaaactgca
     4021 ttttcaagca tgaaaatttg atttccaaca ccaagagcga gtgctccacc acttccacct
     4081 tcaccgatta caatagaaat aattggtact ttcatatcgc tcatttcata aagatttcta
     4141 gcaatggctt cactttgacc gcgttcttcc gcagctcgac ctggataagc acctttcgta
     4201 tcgatgaagc aaataattgg tcggccaaat ttatctgctt gtttcatcaa acgtagcgct
     4261 ttacggaaac cttcaggatg aggcatacca aaattacgat gtaaattatc ttttgtatct
     4321 ttaccacgtt ggtgaccaat aactgtcact gggataccgt ggaaagttgc gataccgcca
     4381 acaattgcag catcgtcacc aaatgcgcga tccccgtgaa gttccatgaa gtcttcgaac
     4441 aaaagtgaaa tataatcaag tgtcgtaggt ctttctggat ggcgagctac ttgaaattta
     4501 tcccaagcag tcatattgct ataaatgctt gattctaact tagctaagcg tttttctagc
     4561 ttttcaattt cattggtcaa atccacatca gaagtttcat tgtactcttt taagtcagca
     4621 atcttacttt ttaattctaa aatcggtttc tcaaattcca tctcattcgc catccgcttc
     4681 acctcctact tcaggtgttt tcacgtgaat gcttaaaata aaacttaatt tattttgcag
     4741 atcaaggcgt gaaatacagt catctagttg tccatgcttt aataaaaact ccgacgtttg
     4801 gaagtcttct ggtaattctt cacgaacggt ttgttctatt acccggcgtc cagcaaagcc
     4861 aataagtgcg cctggttctg caaagttata gtctccaagg gatgcaaaac tagcagaaac
     4921 cccaccagta gttgggtgcg tcattaccgt aataatcagt cccccgtgat tgctaaatcg
     4981 tttaaatgca gcagaggttt tcgccatttg cataagcgaa agcatcccct cttgcatacg
     5041 cgcgccacct gaagcagtga aaataacaaa cggtttattt gttttatcgg catcttccac
     5101 ggcacgaaag attttttcac cgacaacaga gcccatactt gccattctaa aacgagaatc
     5161 catcactgca ataacaagcg gattaccatc aattgtagca tgaccagtaa caatggcttc
     5221 atttaaacca gatttttgct tatctttctc aatacgatcc atataatctt caaaaccaag
     5281 tggatttgct gtcgttaaac tagcatcaat ttcttcaaaa gagccttcat caactagcat
     5341 atcgattcgt gcttttgccc caattggatg atgaaaacca caataattac ataccataag
     5401 atttttttgc aattctttgg tatacattat ttttttacat tccggacatt ttgtcataat
     5461 accttctgga acatctgctt tcgttccatc agaaggaatt gtggcatatt ttctcttttt
     5521 tggttttgta aacaagtctc ctagcaagga taaccctccc catttacgct ttctattgtg
     5581 gttattaacg atttttaatg ttgtaaaaat aaaaaatgaa taaagacatg aaacataaat
     5641 caaccgcatt ttcccacaag aagacaaaat gccagtctat ccgaattaca actggacaga
     5701 ctgcgcaata ttgttttcca cgttaaacta taacatactt tctataaata tagaaagtct
     5761 aagattactt aatgactaca ttctctttac cgagtagctc ttctaacgct tcttgcagct
     5821 catttgatgg cgttacttga atatttttca gctcagcagt ttgtttcgtt attgcttgat
     5881 gcacaatgac cttactgtcg cctttataac gcgttaaaac tggcttaatt tgttccattt
     5941 gctgtggttc cgttaatttt aggaacaatc gtacgggggc ttttatttct tttaaatctt
     6001 ctgctttatt gataattaac tgtagctctc cgttccttgt gtctgctttg acttgcaaaa
     6061 agagaatctc ccctttttgt gcaaagctcg cgaatttacg ataactttcc gggaacatga
     6121 cggcgctcag ttcttttgaa tcatcactaa ttgttaaaaa gcacatcgtt tcgccctttt
     6181 ttgttctaat tgatttgact tcatgtacat aagcagctac ttgatagttt ttgccggaag
     6241 aaagatttgc aagtcttgta atagcaagat tttgtaattt attttggtag tacgatactg
     6301 gatgcgctga aacgtattga cccgtgtata atttttcttt ctccagcttt tcgtcaatcg
     6361 aaatgggcgc ggttttccgg tagcgtggtt tcatcttttt caaaaagtca tcatcttccg
     6421 cgaaaagatt cattcctttc gaatcttcac cgagtagcga aatatattgt agcactgcat
     6481 caatggttgc caaaatcgtt gctcgatcct cgccaaattc gtcaaaacac ccagaaaata
     6541 caagtgcttc taaaacggtt tctgagagca ttttatgtgg cattctttca caaaaatcaa
     6601 agaaatctcg gaaaggtgct ttttttcgtt cgttaataat ttctaaaatg aatttcgttg
     6661 gcactttacg aataacacgg aaactatagc ggatagatga ttcattctcc acttggaagt
     6721 agtaattact atggttgatg cttggcgcta acatgctaat tccgtagttt tttgcttcgg
     6781 taatgtactg ggaaattttg tcgtcattgc caaaaacaga gctaagaagc gacgacataa
     6841 atgcagctgg aaaatgtgct tttaaataag ctaattgaaa agcgattttt gaatatgctg
     6901 cagcgtgact tcggttgaaa ccgtaattcg cgaattgaac aatcatatca tacacttggt
     6961 tagcgctagc atctgaataa cctctactct tagcaccttc cacaaagtga attcgctctt
     7021 cgtttaggac atctgctttt ttcttgctga ccgctcgtct taataaatct gcttctccaa
     7081 gcgaaaatcc agccatttgg ttcgctactt gaataatttg ctcttgataa acgataacgc
     7141 cgtatgtcac ttccaaaata ggcgctaaat ctggatgagg atattgaatt ttttcttttc
     7201 cgtgttttct agcgataaat gtatcaattt gttccattgg acccggacga taaagcgcat
     7261 ctaccgccac gacatcttca aaagaagttg gttttaattt tcggagcacg cgtcgaatcc
     7321 cgtccgattc aaattggaat acccctgtcg tgtcacctgt ttggaatagt ttcaatgttt
     7381 ttttatcttc taaggaaata tctgctaatg ttaacggagt ttctctagta taattgactg
     7441 atttcaaaac acgatcaagt aaactaagat ttctaagtcc taaaaagtcc attttaagta
     7501 agccgatttt ctctaattct cccatagcaa actgggtcaa acgtgcatct ccgctaccta
     7561 attgtagcgc gacttgttct acgagtggct tgtcactaat aactattccg gctgcgtgcg
     7621 ttgaaatatg acgtggcaag ccttccagtt gacaagcaac ttcccaaatc atttcatttt
     7681 ctttagagct tttaatatgg ttttctaaac gcggactttc ttgtagtgct ttttgtaacg
     7741 taatacctaa ctgacttgga atcaacttag accattcaga taatagtaca gaatttagcc
     7801 caaaactcct cgcagtatcg cgaatcgccg cttttgccgc tagtgttcca aacgtgccga
     7861 tttgcgccac atgcgcttct ccgtatttag ataccacata cgaaatcact tcatcacggc
     7921 gattatctgg aaaatccaaa tcaatatcgg gcatcgtgat acgttctggg tttaaaaatc
     7981 gttcaaatag caaattgtaa cgaattgggt ctacatccgt aattctgagt gcataggaaa
     8041 caagcgaccc cgccgcagag ccccgacctg gacctgttaa aattcccgcc tcgcgtgaat
     8101 aacgaataac atcccaaacg attaaaaagt aatctgcaaa acccatttcc gtaatgactt
     8161 ttaattcata ttctaaacgc tcctgatatt ccacacctaa taaatttcgt tcttttaatc
     8221 ctgcaaaggc tgtttgacgc aaaacatctg atgcattttg tccttcattt aatggaaatc
     8281 taggtaataa atgctgatcc aaagcaattt cgacatgaca acgatctgca agttcaccag
     8341 tttctaagca tgcccgtttt tcgaactccg tttgccaatc acgttccatg tcttcttgtg
     8401 aggtaaaata atttggtcca gcaagtggta acgttgtcca atcgaccgtt cgattatcac
     8461 gaatggccgt taaaacttct tttgcttgcg catcttttgg ttctatatat tgtacatttt
     8521 tcgtcgcaac aaccggtaca ttttcttctg cagaaaaagt ttctattttt gtgaaaagac
     8581 gtggattttc tttttgggca gataaataaa cagattcttt accaaaaatt tcgactaaat
     8641 ttgcataaac ttccagtgct ccctcgcgat tctcctccat cagaagacgt tcgatttctc
     8701 ctttggcacc aggtgaaatc gcaatcaagt tactgctata agcgcgtaac cagctttgtg
     8761 gcaattcggg gccttcttcg cgcgtttgaa tagcactcgc gatttttaat aactcgtgat
     8821 atccagcggt tgattccgca attaatatca actcatatga attaattgga tttaagtaac
     8881 cttgaattgt caccgtcatc ccgataattg gttttatatc cgccgctaaa cacttttgat
     8941 aaaactcgac tactccgtaa agtacatttt tatccgtaat tgctaaggct ggataatggt
     9001 attcttttgc tttagcgatt agcttatcaa tcgatgctgt acttgaaagc aaatcataag
     9061 cgctcgcaac ttgtaaatga acaaacccca ctatcctctc tcctttcaaa actctctttt
     9121 tccattatat cggttaagct aaaaaaaaga aagtgtgttc gtgtttttat ataaaaataa
     9181 agccagataa ttaatccgac tttatttcct aattatttat cggcacaaat gcgttgcaat
     9241 tttgccgtca tttcctttat ttcttcttca ttatgaagtg tcgcaccaga agcaagcgga
     9301 tgtccgccgc cgccatactc tttggctaat tcattaataa ctggaccttt agaacgtaaa
     9361 cgagctctaa aaacgggacc ttcttgaatg aacataatcc atgccttgat accttccaca
     9421 ttttcgatac acgaaacaag tgcggaagcg tcgcgcggat caacttcaaa ctcgtttaaa
     9481 agcgtatcac ttaaataaac ggttgcagcg ccattttcat ccatgacaaa gttttgcaaa
     9541 atatatccag aaagttttac cgtatttttc ggtaattcat ataattctcg gtaaagcgcc
     9601 ggacgatcaa atggaaatgt cactaaatgc gcagataaac gtaaagtctc ttccgttgtg
     9661 cttggataca agaagcgccc agtatcacca acaattcccg cataaaggag tcttgcagca
     9721 gtttcattca aaattaactc atccgaaaac atttcccaaa aagcgacaat catttcacta
     9781 caagaagaag ccgtcgtgtc cacccaaagt aaatcaccat acgcatcatc atttggatgg
     9841 tggtcaattt ttataagtgc tttaccaagg ttaaaacgcc cgtctgaaat ccgttcttgg
     9901 ttcgcggtgt cacacacaat cacaagcgca tctttataaa tttcatccgt tatttcgtcc
     9961 actataccaa gaaattggag cgacttttca tcatttccaa ctgaatagac ttttttctca
    10021 ggaaagctag cccggataat ttccgcaagc cccatttgcg atccgtatgc atctgggtca
    10081 ggccgtacat gtctatgcaa aataatcgtt tcatattgtt ttatttgttg taaaatctca
    10141 cttttcattg tttcgcctct atttcttttt aacgttccat catttgacaa gcgacaatag
    10201 cttttccggt caaaattcct tctaagtaaa gctctacatc aagcttaccg gccttacgcc
    10261 ccatctccaa aattcgcggt ttaataataa ttgtcgcgtc catttgaaca ggttttagga
    10321 aatacatcgt tacattttca atcgctacat tccgtttttt catagaaaat agtttttgct
    10381 gtacgacgtc acaaaccact tgtgtaaata caccatacga taatgttccg agtgaattag
    10441 tcatttgcgg gctaacttta aattcataat ctgcctcttc tccagtatct gctttttcag
    10501 aaagctgatt cgcaatcgta tcatcaattg tttcaccgac ttgcggttgt ttttgaatca
    10561 tttgcataga ttttagaata tcctgtctgc taacaatccc gattaatgtt aagtcatctt
    10621 taacgactgg aattacttcg atactctccc aaatcatcat gtgcgccacc gaggctacac
    10681 tcatttttgg tcccacagtt aacggatttt tcgtcattac tcgttcaatt gaaatacttg
    10741 gatttttttc tagaatatcc ttacttgtaa ccatcccagt cagtcgcatc gctcggttaa
    10801 ctacaggaaa tcgactatga cctgtcgctt cttccatttt atgccaatct tccactttat
    10861 cagacgtaga taaaaatgca gttgtttcta atggggtcaa aatatcctcc acaaatacta
    10921 cttctttttt aattaattgg tcataaatcg cgcggttaat catcgttgca actgtaaacg
    10981 tatcatacga agtcgataaa atgggcagtt ctttctcgtc cgccaaccgt ttcacttcgt
    11041 cgtccgtatc aaacccacca gtaatcagta ccgcggcgcc acgtttcaaa gcaagttcat
    11101 gagcgctcac tctatttccg acaattaata agtttcctgc atcggtatag cgttccatcg
    11161 cttccactgt catcgcccca ataacaaact tattaagcga tttataaagc cccgcacgac
    11221 cgcctagcac ttgcccatcg atcatattca caatctcagc aaaagttaat ttttcgatac
    11281 tatctttttg cttccgttca attcgaagtg ttcccactcg tttaatagta gaaacaaacc
    11341 caatgatttc tgcatcttta atagcccgat aagcagttcc ctcgcttaca gacaagtttt
    11401 tcgcgatttt tcgtacagat attttttctc caactgcaag attttcaatg tattttaaaa
    11461 tctgttcatg ttttgtggcc acgacacgtt cacccattcc tattttgtta gatttcgata
    11521 ccttccccaa tttcaagtac ttttccagtt atcccctcat caagcgatgc aacaaatttg
    11581 tgcggatctt gcgcaatcaa aggaaacgta ttgtaatgca ttggaacaac taatttcgct
    11641 tgtaaaaacc gtgccgcaat cgccgcatct tctggtccca tggtaaaatt atccccaatc
    11701 ggcaagaaag caacgtctag cggatttaat tcaccaatta atttcatatc agaaaacaaa
    11761 ccagtgtccc ctgcaaaata aatattttta tcttctatcg taaatacaat cccagttggg
    11821 aaaccaaggt taacaatgcg accatctcga accgtctgcg atccgtgaaa agcttgcgtc
    11881 aacttcactt ggccaaaact aaactgtctt ttcccgccaa tatgcattgg agcgatattt
    11941 tcaagcccat cctctactgc taaaaaagaa gccaaatccg cattacagat aacggttgct
    12001 ccagaattct tagcaatttc aactgtatca ccgacatgat catcatgtcc atgcgacaga
    12061 acgataaagt caggcatctg ctcttccgct tttaaatcac atttctcatt accagaaata
    12121 aatggatcca cgagaatagt tgtatcccca gtaattattt taatacaaga ctgaccatga
    12181 aatgaaatct tcatgttaaa aaacttcctt cctgattcat tattctatgt gtattattgt
    12241 accactattt attataaact actatataac acctcgtaaa ctaagaggtg tttattagca
    12301 aaataattcc ttcgcatgtt atcatgaaat agaaatcaat tggaaagaag gtacaattat
    12361 ggaaaaaaat atcgatgtct tacaaaattg gctaaaagac caaggtgctg aggtggcatt
    12421 tttaacagat ccagagaaca tcgcttattt ctcgggttat catagtgagc ctcatgagcg
    12481 cgtgcttggc ttagcagttt tcccagatag tgaaccgttt ttatttacgc ccgctcttga
    12541 agtagaagat gtgcgcggcg gtgactggac acaccctgca tacggatata acgataccga
    12601 gaatcctttc accatcattg cagacgaaat caaaaaacgc gttgcaaatc caagcaaatt
    12661 tgctattgag aaaaaacata tgagcgtaga tcgctacgaa caattaggtg gattattctc
    12721 cggcagctct ttcattccga ttgaacacaa aattgagcaa attcgtctga ttaaaaccga
    12781 agccgaacta aaaatattaa aagaagcagc cttattagcc gattacgccg tacaagttgg
    12841 tgtaaacgaa atcgcagaag gtaaaacaga agcagaaatc gtggcgaaaa tcgaatacga
    12901 aatgaagaaa aaaggcgtaa ctgccatgtc tttcgataca atggtcctta ctggtaaaaa
    12961 cggtgccctg ccacatggta ctccaggcga aacaaaaatc aaaaaaggcg atttagtttt
    13021 atttgattta ggcgttgtcc ataaaggcta ttgctctgat attacacgca cagtagcttt
    13081 tggagatatt tccgatgaac agaaaaagat ttacgacact gttttagaag cgcaaattgc
    13141 cgctgtcgaa aaagtaaaag acggggtaaa agcaagcgaa attgatttaa ctgctagaaa
    13201 tattattcgt gaagcaggtt acggtgatta tttcccacat cgtcttggtc acggtcttgg
    13261 cgcgagtgtc catgaattcc cttcgattac agaaacgaac aatatggaac tgcaagaaaa
    13321 tatggtattt acgattgaac caggtattta tgttcccggt gttgccggcg ttcgtataga
    13381 agatgacctc gttgtcacaa aagacggcgt gcaagtatta acggaattcc caaaaacttt
    13441 acaagtaatc gactaacaag aaaagcgaac tttcctttga gaaagttcgc tttttttatt
    13501 aaattaattc tttgctatcc gtatagggta aatcaagtga atctgcaaca gccttgtacg
    13561 taatgtgacc ttggtatgtg tttaatccac gaagtaagaa tgggtcattt tgcacggctg
    13621 cttttaagcc ttgattagca agtttcaatc caaatggtaa agtggcatta gtaagcgcca
    13681 aagtggacgt ccgcggtact gcacctggca tatttgcaac agcataatga agtacaccat
    13741 atttttcgta ggttggatta tcgtgtgtgg aaacgtgatc tgttgtttca aaaatccctc
    13801 cttggtcaat cgcgatatct acaaggacag atcccggaat catttgttta attacatgct
    13861 ctttgacgag tttgggcgct tttgctcctg gaattaatac tgctccaata accaaatcag
    13921 cttttttcac agctgtttca atattaaaat cattcgacat taacgtttgg acttgattgc
    13981 caaaaatatc gtccagttcg cgcaatcgtt tcaaattcat atcaagaatg gtcacgttgg
    14041 cacctaaacc agctgcaatt ttcgctgcat ttgttccagc gattccgcca ccaataataa
    14101 ccacttcact tttctctaca cccggcaccc caccaagcaa gacacccata ccaccattcg
    14161 ttctttgtaa aaattgtgcg ccaatctgag ctgccattcg cccagcaact tcactcattg
    14221 gcgaaagtag tggcaacgtg tggtctgcaa gttctactgt ttcatacgct acactattta
    14281 ctttactctc catcaaagct ttcgcaagcg ttggttcatt tgccaaatgt aaatatgtga
    14341 aaagtaatag tccttcttta aagtatgtat actctgatgc aatcggttct tttactttta
    14401 caaccatatc tacatcccaa gcttctttag ctgtttcaac aatttttgcc cccgcttgca
    14461 caaaatcagc gtcttgataa ttagagccaa tgcccgcatc tttttccacg tatacagtat
    14521 gacctgcatt tacgtatgaa aaaacacttg ccggagtcat tgccacccta ttctcgttat
    14581 ttttaatttc ttttggtacg ccgactaaca tctaaatcac tctccttgat ataggtataa
    14641 tagactataa aagattttct acacccccat gctaac
//
LOCUS       DASDYK010000066        14568 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.066, whole genome shotgun sequence.
ACCESSION   DASDYK010000066 DASDYK010000000
VERSION     DASDYK010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14568)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14568)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14568
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.066"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..190)
                     /locus_tag="U0308_001903"
     CDS             complement(<1..190)
                     /locus_tag="U0308_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEM2316865.1"
                     /translation="MQVQKCRFFVLLLPALYLLYGISLALQFGNNADLINTIANSCLL
                     FLATIILTNMARLKNWIDF"
     gene            398..1363
                     /locus_tag="U0308_001904"
     CDS             398..1363
                     /locus_tag="U0308_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM2316866.1"
                     /translation="MKELLGLLKEGNKSALTAALVNTVVSIIKGITYFFTGNIAMFAE
                     TLHSLGDAANQFFVFIGSALSKKRPTKRFPHGFGRMVNLVLLGAVIVVGIMAFETIRE
                     GFAHIIHPTSSTGFLINLTVLLLCTVLEFSVLVKAMHEIAHDVGLESKGLRLFKDSIL
                     NLGKAKAATKLVFLEDSVATGGGLLAMIAVIISHFTPFHQAEGIASMLIGVMMFIVVG
                     KVFLDNAAGVIGESDQSMHLTVGQLVMSDPDVRDIQVLTVLKEGDVFHVDVEVELDPM
                     LTLAEVDDIKDRLEESIGKLRGVADVLISFDEDDAIRNWEYGDGR"
     gene            complement(1408..1950)
                     /locus_tag="U0308_001905"
     CDS             complement(1408..1950)
                     /locus_tag="U0308_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2316867.1"
                     /translation="MRITGERIYLRPFQITDANQKLAFHLANKAFFEGYSMERDDRFY
                     TIKEQQSLISRLEDFAASDVEYYYGIFLHDTDELIGTINLFSILRESLQSAFIGYFLD
                     KEHNGNGYATEAVELIVDFGFDILGLHRIEAGVMPKNERSKQVLLKAGFHLEGLAVQN
                     VRINGNWEDHQVLAIINPGD"
     gene            2140..3042
                     /locus_tag="U0308_001906"
     CDS             2140..3042
                     /locus_tag="U0308_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEM2316868.1"
                     /translation="MNVNAETEDATLLLDGLLQNVAIIRFDTNKKVTYANALFAEAMG
                     YSEEEMLTLSHPDLCFPDFVQSASYKAMWTNLLAGQKFQNKIERKNARGERVWFEATY
                     IPIIREDTVVGVAKIATDITRREETVHDFASGLKSMATNLKEHSSVGKTRSEALLELV
                     KSITKESNENTDTLHDLQTEAQNIHGIINTINGIASQTNLLALNAAIEAARAGDAGRG
                     FSVVAEEVRKLSSRVEEAIKEVEKSVNGITQEINTISSGTERVEAKVEESQEVLILSL
                     EDFSQIESASTALDQNAGAFTKMI"
     gene            3070..3276
                     /locus_tag="U0308_001907"
     CDS             3070..3276
                     /locus_tag="U0308_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316869.1"
                     /translation="MKLIGKHPSGRAIIIRLNNQEYHYETANSFGSATSLTRAKTEAR
                     ADSFTSSEMNQGLHIGNWHWKELG"
     gene            complement(3316..3669)
                     /locus_tag="U0308_001908"
     CDS             complement(3316..3669)
                     /locus_tag="U0308_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316870.1"
                     /translation="MKKLFDETNEFEAKYYRTIWYGYIDNEFAPELSDEIKQLIQSDL
                     TEKTANPIEATHWVFYSETQAGDAIGDKVRSSIMVRHRDNKFVVHYNVSDFQFVTVFD
                     VATAFKDQLEQALNA"
     gene            complement(3698..4099)
                     /locus_tag="U0308_001909"
     CDS             complement(3698..4099)
                     /locus_tag="U0308_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fosfomycin resistance thiol transferase FosX"
                     /protein_id="HEM2316871.1"
                     /translation="MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKE
                     KFFLIAGLWICIMEGDSLQERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQG
                     EGRSIYFYDFDNHLFELHAGTLEERLKRYHE"
     gene            complement(4114..5493)
                     /gene="rlmD"
                     /locus_tag="U0308_001910"
     CDS             complement(4114..5493)
                     /gene="rlmD"
                     /locus_tag="U0308_001910"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HEM2316872.1"
                     /translation="MNQNPVEEGQKFPLTIRRMGINGEGIGYFKKAVVFVPGAITGEE
                     VVVEAVKVRDRFTEAKLNKIRKKSPNRVTAPCPVYEACGGCQLQHVAYSAQLELKRDI
                     VIQSIEKHTKIDPTKLKIRPTIGMEDPWRYRNKSQFQTRMVGSGQVETGLFGANSHQL
                     VPIEDCIVQQPVTIKVTNFVRDLLEKYGVPIYDEKAGSGIVRTIVVRTGVKTGETQLV
                     FITNSKKLPKKREMLAEIEAALPEVTSIMQNVNQAKSSLIFGDETFLLAGKESIEEKL
                     MELEFDLSARAFFQLNPFQTERLYQEVEKALVLTGSETLVDAYCGVGTIGQAFAGKVK
                     EVRGMDIIPESIEDAKRNAEKNGIENVYYEVGKAEDVLPKWVNEGFRPDAVIVDPPRS
                     GCDQGLIKSLLDVEAKQLVYVSCNPSTLARDLALLAKKYRIRYMQPVDMFPQTAHVET
                     VVLLQLKDK"
     gene            complement(5558..5938)
                     /locus_tag="U0308_001911"
     CDS             complement(5558..5938)
                     /locus_tag="U0308_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEM2316873.1"
                     /translation="MTKPLKLVYTENGFDTGSFLIDDKLTEYSPADLMLMSIASCSAI
                     VFRNILKKKRVNFTDLWVDATMERIPEEENRISAIHLHFKITGAALDPKALEKALKLT
                     PKYCSMVRSVEKSILVDESLEIMP"
     gene            6045..6689
                     /locus_tag="U0308_001912"
     CDS             6045..6689
                     /locus_tag="U0308_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HEM2316874.1"
                     /translation="MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRI
                     LEMFYEDPKRWAFALQIYFLNTRFRSIKAALTDQNNVLDRSIYEDALFTQINFEEGNI
                     SEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQTFDNP
                     GLLDYYKHLHSRYDSWFESYDKSETLVINIDEIDINQPNDADYVMQLIHEKLKR"
     gene            complement(6719..7588)
                     /locus_tag="U0308_001913"
     CDS             complement(6719..7588)
                     /locus_tag="U0308_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEM2316875.1"
                     /translation="MWKKVVKYTKKNGIVQIGQTVSARVGRNDVSGNAAQLAYYMLFS
                     IFPMLLIAATLLAYLHIDKDSVFNMIKEFAPDQIMDFLEENLNNLLTQKNGGLLSIGI
                     IATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTLAMLATVGATLLLLVFG
                     QQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLYWVAPNRRSTLISVLPGA
                     LFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFYLTGIILMIGGELNATL
                     AIRKKKKELGEIN"
     gene            7678..7899
                     /locus_tag="U0308_001914"
     CDS             7678..7899
                     /locus_tag="U0308_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1128 domain-containing protein"
                     /protein_id="HEM2316876.1"
                     /translation="MNLETPSQENLNFMLTEITTKLKMVNVGVFENLELDSVDYNALI
                     DIYQLIKRKSNFSPREMQLFAEELRRIRK"
     gene            complement(7919..8725)
                     /locus_tag="U0308_001915"
     CDS             complement(7919..8725)
                     /locus_tag="U0308_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAC(3) family N-acetyltransferase"
                     /protein_id="HEM2316877.1"
                     /translation="MGEKMAIWRTKKPATKQKIVSDLQESGIKKGDTIIFHASMSKAH
                     WICGGPVTVILALQELVGESGNIVMPAQTGQLSDPAKWENPPVPESWWKIIRRETPPF
                     DPLVTPTRGMGVIAETFRTMPDVERSFHPYHSFCAWGKDKKQILANQPLAKSMGDESP
                     LGKMYQLDAKIILFGVDNNNNTSLHLAEERSNVFPLIENQAAFLKNGEIIWEKYQEID
                     YNSEVFIALGRAYEKERDFHPTTIIGAPTKIYDMRDLVDFGTDYFQTKNH"
     gene            complement(8851..9609)
                     /gene="map"
                     /locus_tag="U0308_001916"
     CDS             complement(8851..9609)
                     /gene="map"
                     /locus_tag="U0308_001916"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEM2316878.1"
                     /translation="MITLKSRREIDEMKAAGKILADTHKELKKIIKPGITSWDLEVFT
                     EEFLRKNGATPEQKGFEGYEYAICASINDEICHGFPRKQKLNQGDIITVDMVVNYRGA
                     LADSAWTYAVGEVPDDVKHLMDVTHKALYLGIEQAQVGARVGDIGHAIQTYVESENLA
                     VVREFIGHGVGPTLHEKPDIPHYGTAGKGPRLKEGMVITVEPMVNMGAWKAKMDDNGW
                     TARTVDGSLSAQYEHTFAITKDGPEILTYQGEND"
     gene            9797..10243
                     /locus_tag="U0308_001917"
     CDS             9797..10243
                     /locus_tag="U0308_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HEM2316879.1"
                     /translation="MTKVMIVYASMTGNTQEIADILGEELEKYDIEVEIEECISVDPE
                     DLLEYDGALIGGYTYDDGQLPDEFVDFYEDMADVDFSGKVCASFGSGDTFYDEYCLTV
                     DLIETRLKEQGATVPVAGLKVDLDPDEEDVVRAESYAKTFVDVLKG"
     gene            10381..11613
                     /locus_tag="U0308_001918"
     CDS             10381..11613
                     /locus_tag="U0308_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HEM2316880.1"
                     /translation="MTVFSEKLEKYAELIVKVGVNVQPEQKVVIMAPVDAAPLVRLIS
                     KYAFEVGAEDVIMDWRDEELGALRYKNAPLRVFESAPVHRVAEKTELAKEGACFISIT
                     SEDPDLLNGVDSNKIATFQKTMGGAMSEFRELMQANVVSWTVVAAASQGWAAKVFPDL
                     TPAEQMETLWEAIFETTRINTENPVETWKNHDQTLAAKAESLNEKQFTSLHYTAPGTD
                     LTIGLPKNHLWVGAGSKNKKGHEFMANMPTEEVFCCADKLKVEGYVSSTKPLSYAGNI
                     IDDFKITFEKGRIVGVEAASGEEILKDLIATDEGSHYLGEVALVPDPSPISQSGILFY
                     NTLFDENASNHLAIGSAYAFNVKGGEEMSREELEAAGVNNSLTHVDFMIGSSEMDIDG
                     VTESGEVVPVFRKGDWAF"
     gene            11717..12976
                     /locus_tag="U0308_001919"
     CDS             11717..12976
                     /locus_tag="U0308_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2316881.1"
                     /translation="MKFSTWDINLKVRLFGEALLDISFWMVFPFLTIYFSESIGRELT
                     SLLLIISQVLAVFTALLGGYFADNFGRKRMMSISVIGEGFGFLVFAIGALHVVDSPYL
                     SFAGFAIASVFMAFYQPASQAMIADVVPPEHRTHIYSVFYMMINIAVVIGPILGSVLF
                     YNFTTETLLAIVCADLLLLFLLQKFGHETAPLLVNPDLQKEAVRKSIGAVLMEQLKNY
                     KIIFKDKIFFLYIVAGIIVSQSFMQLDLLFPLYIKEVIGASNLFVFHFTGEQLFGVIV
                     SINGFFVAALTVVVTRWMSHFREKFVFMNSSFLYAIAIFLFGISTGPWGAICAIILFS
                     FAELMTVGLQQTFVSQLAPEDKRAMYFSAAGLRYTLGKVIAPLAITLSTLIGYTGTFT
                     IIGILALISGLIYYYMYSEFEKQRQVS"
     gene            13194..14186
                     /locus_tag="U0308_001920"
     CDS             13194..14186
                     /locus_tag="U0308_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEM2316882.1"
                     /translation="MFGTTTIGIDLGTANILVYSKEKGIILNEPSVVALNTNDGTVLA
                     IGQEAKEMIGKTPTSISAVRPMKDGVIADFDLTSGLLREIMRRISVSGVRKPNVVVCT
                     PTGATSVERRAISDAVRSTGARSVVLIEEPVAAAIGADLPVAEPVANVIVDIGGGTSE
                     IAIISYGGVVSSTSIRTGGDHMDEEIIQYIRKNYNLLIGQTTAERIKMELGYAPIEHV
                     TQTADIRGRDLLTGLPKTIQVSSTEIQSALAETLQRILEAIRNTLELCPPELSGDIVD
                     RGIILSGGGSLLQGFRDWLVQEIDVPVHMAPSPLESVAIGTGRSLVFADKLAKN"
     gene            14315..14386
                     /locus_tag="U0308_001921"
     tRNA            14315..14386
                     /locus_tag="U0308_001921"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14348..14350,aa:Arg,seq:cct)
BASE COUNT         4229 a         2750 c         2878 g         4711 t
ORIGIN      
        1 taaagtctat ccaattcttt agtctcgcca tgttggttag tatgatggtt gctaaaaaaa
       61 gtaagcaact atttgcaatg gtattgatta aatctgcgtt attcccaaat tgtagtgcaa
      121 gcgaaatccc gtacaagaga tataacgctg gcaataacaa cacaaaaaaa cggcattttt
      181 ggacctgcat tctcgtattc caacgccttc cgtttcaaaa tcagctctca gactctctga
      241 ataagctcct agtatcagtt tagcagatat aaaaatgaaa agaaagcttg tttgtgctta
      301 catttttgca agcttctgta aggctttcgg gttcttattt tctttttggt aaaaaaagtg
      361 ctacaatttc ttaatgatat ttgtggagga gactaggatg aaagaattat tagggttatt
      421 aaaagaaggt aacaaatccg ccttaacagc ggctcttgtt aacaccgttg tttctattat
      481 taaaggtatt acttattttt ttacaggaaa tatcgccatg ttcgcggaaa cgttacatag
      541 tcttggagat gcagcaaatc aattttttgt tttcatcggc tctgctttaa gtaaaaaacg
      601 gccaacaaaa cgctttccac atggtttcgg gcgaatggtt aacttagtgc tacttggtgc
      661 tgtcattgtt gttgggataa tggcttttga gacgattcgt gaaggttttg cgcatattat
      721 ccatccaaca agttccactg gtttccttat aaaccttact gtgctcctac tttgtaccgt
      781 gctagaattt tctgttttag taaaagcaat gcatgagatt gcgcacgatg ttggcttaga
      841 atcaaaagga cttcgcttat ttaaagacag tatcctaaat ctaggtaaag caaaagctgc
      901 aaccaaactc gtattcttgg aagattccgt tgcaactggt ggtggacttc ttgcgatgat
      961 tgcggttatt atttctcact ttaccccttt ccatcaagca gaaggtattg catccatgtt
     1021 aattggtgta atgatgttta tcgtcgttgg taaagtcttt ttggacaatg cggctggagt
     1081 tattggcgaa tcagatcaaa gtatgcattt aactgtcggt cagctcgtaa tgagtgatcc
     1141 tgatgtgcgc gatattcaag ttctaaccgt tcttaaagaa ggcgatgttt tccatgtcga
     1201 tgtggaagtg gaattagatc ccatgctcac cctcgctgaa gtggacgata ttaaagaccg
     1261 tttggaagaa agtatcggaa aattacgcgg tgttgctgat gtacttattt catttgatga
     1321 agatgatgcc atccgtaact gggaatatgg ggacggacgt taaaaataga aaaagccaag
     1381 tgcgcggact gcgacacttg gcttttttta gtctccagga ttaataattg ctaggacttg
     1441 atgatcttcc caatttccat ttatgcggac attttgtact gcgagccctt ctaaatggaa
     1501 gccagctttt aaaaggactt gtttggaacg ttcatttttc ggcattactc ctgcctcaat
     1561 tcggtgcagg ccaagaatgt caaaaccaaa atctactatc aactccactg cctcggttgc
     1621 ataaccattt ccattatgct ctttatccag aaaataacca ataaacgcag attgtaaaga
     1681 ttcccgcaaa atactaaata aattaatcgt accaataagt tcatccgtat catggaggaa
     1741 aatcccataa tagtactcca catcactcgc agcgaaatct tctaatcgtg aaataagcga
     1801 ttgctgttct tttatcgtat aaaaacgatc atcccgctcc atagaataac cttcaaaaaa
     1861 agctttattc gctaaatgaa aagctagttt ttgattggca tctgttattt gaaaaggtct
     1921 taagtaaatc cgttcccccg taatccgcat ccttatccct cccgcatttt tctaaattat
     1981 aagattgttc tgatgtgatt gcaagtatca ctgctaagct taatttttct atatacccat
     2041 tttattaaaa aataaacttc ccattacgaa tacatgtgtg ttattatgtt gatgttggtt
     2101 gtttttatat tatttttcta aaaaatggag gtttttttaa tgaatgttaa tgcggaaaca
     2161 gaagacgcaa ctctccttct cgatggttta cttcaaaacg tggcaataat tcgttttgat
     2221 actaataaaa aagtaactta tgctaatgcc cttttcgcgg aggcaatggg atactcagaa
     2281 gaagaaatgt tgactttatc ccacccggac ttatgctttc ctgattttgt ccaaagtgca
     2341 agctataaag caatgtggac aaatttgctt gctgggcaaa aatttcaaaa taaaattgaa
     2401 cgaaaaaatg cacgcggtga acgtgtttgg tttgaagcga cttatatccc gattatacgt
     2461 gaagatacgg tcgttggagt agccaaaatc gctacagata ttacgagaag agaagaaacg
     2521 gttcatgact ttgcatctgg tttaaaaagc atggctacaa atttaaaaga acattccagt
     2581 gttggaaaaa cgcgcagtga agctctcctt gaactcgtga aatcaatcac gaaagaatcc
     2641 aatgaaaata ccgatacact tcacgatttg caaacagaag cccaaaatat tcacggcatt
     2701 attaatacaa ttaacggtat tgcttctcag actaatttac ttgccttaaa tgcagcgatt
     2761 gaggcagcac gtgctggtga cgccggacgt ggatttagtg ttgtagcgga agaagttcgt
     2821 aaactttcga gtcgtgtaga agaagcaatt aaagaagtgg aaaaaagtgt caacggtatc
     2881 acgcaagaaa ttaatactat ctcaagtggt acggaacgtg tcgaagcaaa agtcgaggaa
     2941 agccaagaag tgcttatttt atctttagaa gactttagcc aaattgaatc tgcctctact
     3001 gccttggatc aaaatgccgg tgctttcaca aaaatgattt aaccgactga aaaaaggagc
     3061 gaagaaacct tgaaacttat tggaaaacat ccttctggtc gtgccattat tatccgtttg
     3121 aacaaccaag aataccatta tgaaaccgca aatagttttg gaagtgcgac ttcattaaca
     3181 cgagcaaaaa cagaagctag agccgatagt tttacatcta gtgaaatgaa ccaaggttta
     3241 catattggta attggcactg gaaagaactt ggatgaacga aaatcccgtc tataaaaata
     3301 gacgggattt tttatttacg cattcaatgc ttgttctaat tggtctttaa aggcggttgc
     3361 cacatcaaat acagtaacaa attggaaatc gctcacgttg taatggacga caaacttatt
     3421 atcccggtgg cgaaccataa tggaagagcg gactttatca ccaattgcgt cccctgcttg
     3481 ggtttcgcta taaaaaaccc agtgagttgc ttcgattgga tttgctgttt tttctgtaag
     3541 gtcgctttga atgagttgtt ttatttcatc acttaattct ggcgcgaatt cattgtcgat
     3601 gtagccgtac caaatagttc ggtagtactt tgcttcaaat tcattcgttt catcaaatag
     3661 ttttttcatg tttgtttcct cctattaggt gttatttcta ttcgtgatac ctttttaagc
     3721 gttcttctaa tgtaccagcg tgtaattcaa acagatgatt atcaaaatca taaaaataaa
     3781 tggaacgtcc ttcaccttgg actctgggac gttctggttt catttccaca ccgagagctt
     3841 taatccgctc agtatattca tccacttcct cggattgaat ttggaaagca atatgattgt
     3901 aagttcgctc ttgtaaagaa tctccttcca taatgcaaat ccacaaacca gctattagaa
     3961 aaaatttttc tttggaaagc gaaaatgttt tgtcgccact agaatagatt tcttctgcat
     4021 taaaaatatt ctgtaagaaa gcagttgttt tattcaaatc tttcacaatt aaagtgatat
     4081 ggcttaatcc tgaaatcatg taccaccagt cctttattta tcttttaact gcaagagtac
     4141 tacggtttcc acgtgagctg tttgcgggaa catatcgacg ggttgcatat agcgaatgcg
     4201 atatttcttc gcgagtaaag ctaagtcacg tgctaatgtg gatggattac aggatacata
     4261 aacaagttgt tttgcttcca catctagtaa tgattttatt aggccttggt cacagccgct
     4321 tcttggtggg tcaacgatga ctgcgtctgg gcggaaacct tcatttaccc attttggtaa
     4381 tacgtcttct gctttcccaa cttcataata aacattttcg atgccattct tctcggcgtt
     4441 tcgtttagcg tcttcaatgg attctggaat aatatccata ccacgaactt cttttacttt
     4501 tccggcaaaa gcttggccga ttgttccaac accgcaataa gcatctacta gtgtttcact
     4561 gcctgttagt acgagtgctt tttcgacttc ttgataaagt cgctctgttt ggaacgggtt
     4621 taattggaaa aaggcacgag cagatagatc gaattctagt tccattaatt tctcttcaat
     4681 gctttctttt cctgctaaaa ggaacgtttc gtcaccgaaa ataagtgagg attttgcttg
     4741 attcacgttt tgcataatcg aagtgacttc cggaagagct gcttcgattt ctgcaagcat
     4801 ttcgcgtttt ttaggtaact ttttactatt tgtaatgaag acgagctgtg tttcgccggt
     4861 tttcacgcca gtacgaacga cgatagttcg gacgatacca ctgccagctt tttcatcata
     4921 aattggcacg ccgtattttt ctagtaagtc gcgaacaaaa ttcgttactt tgatggtaac
     4981 gggttgttgg acgatacaat cttcaattgg aacaagttgg tgagaattgg caccgaaaag
     5041 ccctgtttcg acttgaccac tgcctaccat tcttgtttgg aattggcttt tattacggta
     5101 acgccatggg tcttccattc cgattgttgg gcggattttt aatttggttg gatcgatttt
     5161 tgtatgtttt tcgattgatt gaataacaat atctcttttt agttcaagtt gggcgctata
     5221 ggccacatgt tgcaactggc aaccaccaca cgcctcgtaa actgggcaag gtgcggtaac
     5281 tcggtttgga gattttttac gaattttatt taattttgct tcggtgaaac gatcacgaac
     5341 tttgaccgct tcgacaacta cttcttcacc ggtaattgcg ccaggtacaa atacaactgc
     5401 ttttttaaag tagccgattc cttccccgtt gattcccatg cgccgaatag ttagcgggaa
     5461 tttttgtcct tcttctactg gattttgatt cattattttc ctccatcatt ccaagtcttc
     5521 attaatacta acaaaaaaac agcagcttgt cagtagttta tggcatgatt tcaagacttt
     5581 catcgacaag gatgcttttt tcgacagaac gaaccatcga acagtatttc ggtgttaatt
     5641 ttaatgcttt ttcaagtgct tttggatcca aggcagcacc ggttatttta aaatgaagat
     5701 gtatcgcgct tatacgattt tcttcttctg ggatgcgttc cattgtggcg tctacccata
     5761 agtcggtaaa gtttactcgt tttttcttta aaatgttacg aaaaacaatg gcgctacaac
     5821 tggcaataga cattaacatc aaatccgctg gtgaatattc ggtcagtttg tcatcgatta
     5881 aaaaacttcc tgtgtcaaac ccattttcgg tataaactag ctttaatggt tttgtcatgg
     5941 ttatccctca tttcttctct tttatcgtac aaaaaatctc cttattaagc aaattagtag
     6001 tataatgaac agatagtcga ccaaaaaagg aggctactca tgttatggaa ggagtaggaa
     6061 ataaagtgat tgttttagca ggaatgattg gtgctgggaa aagtagctat acagagctaa
     6121 tcgcaaatga actcggaaca aaggcatttt atgaaagcat taaggataac cgcatccttg
     6181 aaatgtttta tgaagaccca aaaagatggg cttttgcctt acaaatatat tttttaaata
     6241 cccgctttcg tagtattaaa gctgcgttaa cggatcaaaa taatgtgctt gatcggagca
     6301 tatacgagga cgcgcttttt acgcaaatta attttgaaga aggtaacatt tcggagcctg
     6361 agatggatac ataccttgat ttactcgaca atatgatgga agaacttgct tatatgccga
     6421 aaaaagcgcc tgatttgttg atttatttgc gaggaagttt agacactgta ttgagccgaa
     6481 ttgctctccg tggtcgtcct tatgaacaaa cctttgataa tccaggttta cttgactatt
     6541 acaagcatct gcatagtcgt tatgacagct ggtttgagtc ttatgataag agtgaaaccc
     6601 ttgttattaa tatcgacgaa atagatatta atcaaccaaa tgacgcagat tatgtcatgc
     6661 aacttattca tgaaaaatta aaacgctaaa acaggctttt tgctgtttta gcgttttttt
     6721 aattgatttc gcctaattct tttttctttt tccgaatcgc cagtgtagcg ttaagctccc
     6781 cgccaatcat caaaataatg ccggtcaaat aaaaccataa cattaaaata ataattacac
     6841 cgatactgcc atatgtggct gaatagttgc cgaaattatt tacgtaatac gcaaaaccta
     6901 gcgaagcaac tgtccaaccg attgttgaaa aaagcgctcc aggtagaaca ctaatcaacg
     6961 tactgcgccg gtttggtgcg acccaatata aaaaggtaaa tacgacaaaa ataacgatga
     7021 gtgtaacggt ccaacgaaga ttattccaaa agctaagaaa gtcttccgag aaattcaaat
     7081 gattaattaa aaacatccct atttgttgtc caaatacaag taatagcaag gttgccccta
     7141 ctgtcgcaag cattgcgagt gtgaaaaaca tcgataataa tcgttgcacg acgtagtttc
     7201 gcttattggt tacgccatac gctttattga gcgatttcat gaccgcattc atgccattcg
     7261 aggccgacca taaagtcgcg ataatcccga tagaaagtaa tccgccattt ttctgcgtta
     7321 gtaagttatt taaattttct tctaaaaagt ccataatctg gtctggcgcg aattctttaa
     7381 tcatattaaa aacggaatct ttatcaatat gaagataggc aagtaatgtt gccgcgatta
     7441 agagcattgg aaaaatcgaa aacagcatat aataagctaa ctgtgctgca tttcctgaaa
     7501 catcatttcg acctactctc gcacttactg tttggccaat ttgaacaatc ccgtttttct
     7561 ttgtatattt aactactttt ttccacactg ataaggcccc ctgttctagt cattcgtctg
     7621 gaagtttttc ttctactatg gtaaaatttt gtctattagc ttgaaaggag caaaaagatg
     7681 aatcttgaaa ccccttcaca ggaaaacttg aattttatgt taaccgaaat tacaacgaaa
     7741 ctaaaaatgg tgaatgttgg tgtttttgaa aatctggagc ttgactctgt tgattataac
     7801 gcacttatcg atatttatca gctaattaaa cgtaaatcca atttcagccc gcgtgagatg
     7861 caattatttg cagaagaatt acgccggatt cgcaaataaa acaaattcca gccacttttt
     7921 agtggttttt tgtttggaaa taatcggtac caaaatccac taaatcacgc atatcataaa
     7981 ttttcgtcgg cgctccgata atcgtcgttg ggtgaaagtc acgttctttc tcataagcgc
     8041 gacctaacgc gataaacact tcactattat aatcaatttc ctgatacttc tcccaaatga
     8101 tttcgccatt ttttagaaaa gctgcctggt tttcgatgag cggaaataca ttggagcgtt
     8161 cttccgctaa atgaagcgat gtattgttat tattatctac cccgaacaag ataattttcg
     8221 catcaagttg atacattttc cctagcggcg attcatctcc catgcttttc gcaagtggct
     8281 ggttggcaag aatttgtttt ttatcttttc cccaagcaca aaacgaatgg tatggatgaa
     8341 aactacgctc aacatctggc atagtacgaa atgtttcggc aatgacaccc attccacgag
     8401 ttggtgttac aagcggatca aatggcggtg tttctctgcg aattattttc caccaacttt
     8461 caggaactgg cggattttcc cactttgcag gatcacttaa ttgacctgtt tgagccggca
     8521 ttactatatt gcctgattca ccaaccagtt cttgcaatgc caaaataacg gtaactggac
     8581 caccgcaaat ccagtgtgct tttgacatgg aggcatgaaa aataatcgta tctccctttt
     8641 taatacccga ttcttgtagg tccgacacga ttttttgttt tgttgctggc ttttttgttc
     8701 gccagatagc cattttttct cccattgtat gtcaccgcct ctaaaaataa agccagatgc
     8761 ctagaaaaaa acggcaaact aaaagcagct gtgtgaaact tgtgctttta cttgcattct
     8821 gttctaaatg catctggcta aatagtttaa ttaatcgttt tcgccttgat acgttaaaat
     8881 ttctggacca tcttttgtga ttgcaaaagt atgttcatat tgcgcagaca aagagccatc
     8941 aacagttcta gcagtccagc cattatcgtc cattttggct ttccaagcac ccatattgac
     9001 cattggttcc actgtaataa ccatgccttc tttcaagcga ggtcctttgc cagctgtacc
     9061 gtaatgtggg atatctggtt tttcatgtaa agttggtcca acgccgtgac caataaactc
     9121 acgtacaaca gcaagatttt ctgattctac atatgtttga atagcatgac caatatcgcc
     9181 aactcgtgcg ccaacttgtg cttgttcaat ccctaaataa agtgctttat gcgttacatc
     9241 cattaaatgt ttcacatcat ctggcacttc acctacggca taagtccaag cagaatcagc
     9301 aagtgcaccg cgataattca cgaccatatc tactgtaata atatcgcctt ggttaagctt
     9361 ttgtttgcgc gggaagccat gacaaatttc gtcattaata cttgcacaaa tagcatattc
     9421 ataaccttca aagccttttt gctctggagt cgcgccattt ttacgtaaaa attcttctgt
     9481 aaatacttct aaatcccagc tagtaatacc tggtttaata atttttttaa gttctttatg
     9541 cgtatcggca aggattttcc ctgctgcttt catctcatcg atttcgcgtc ttgatttgag
     9601 tgtgatcatc ttttcattcc ctcctaaaat ttccactatt tactattata gctcgaaacc
     9661 ccttagaaat aaagtaatct ggaaaaaagg ttgcagtttt tctgaagaca tttataatag
     9721 aatgtatcag ttaaaaaatg gtgggctggt ttgtgccatt ttaaacaata aaaaattcag
     9781 aaaatggtga tgcaaaatga caaaagtgat gatcgtttat gccagcatga ctggtaatac
     9841 acaagaaatt gccgacattt taggtgaaga attagaaaaa tacgatatcg aagtagaaat
     9901 tgaagaatgt atttcagttg atcctgaaga tttactagaa tatgatggcg ctctaatcgg
     9961 tggctataca tacgatgatg gtcagcttcc tgatgagttc gttgattttt atgaagatat
    10021 ggcggacgtt gattttagcg gcaaagtttg tgcttctttc ggttccggcg atacttttta
    10081 tgatgaatac tgtttaacag ttgatttaat tgaaactcgt ctaaaagagc aaggtgcgac
    10141 cgttcctgtt gctgggctta aagtagacct tgatccagat gaagaagatg ttgttcgcgc
    10201 ggaaagttac gcaaaaacat ttgtggatgt attaaaagga taattcgaaa gcaagtcctc
    10261 tttttcggac ttgctttttt atttatttaa aaatagcgaa aacagtagcg tagtggttgc
    10321 tttacctcat taattgagat acaattctcg tattgaataa aaagattgga gtgattaatt
    10381 atgacagtat ttagtgaaaa gttagaaaag tatgcagaat tgattgtaaa agttggggta
    10441 aatgtccaac ctgaacagaa agtggtaatt atggctccag ttgacgcggc tccacttgtt
    10501 cgccttattt ccaaatatgc ttttgaagtt ggtgcagagg atgtcattat ggattggcgc
    10561 gatgaagaat taggcgcatt acgttacaaa aatgctccac tacgcgtttt tgaaagtgct
    10621 ccggttcacc gtgttgcaga aaaaacagaa cttgccaaag aaggcgcttg ttttatctcc
    10681 atcacttccg aagatccgga tttactaaac ggcgtggata gcaacaaaat tgcgacattc
    10741 cagaaaacaa tgggtggtgc aatgagcgag tttcgcgagt taatgcaagc aaatgttgta
    10801 agttggacag ttgttgcagc agcttcacaa gggtgggcag caaaagtatt cccagattta
    10861 actccagcag aacaaatgga aacactttgg gaagctattt ttgaaacaac tcgtatcaat
    10921 acagaaaacc cggtagaaac ttggaaaaat cacgatcaaa cacttgctgc aaaagcagaa
    10981 agtttaaatg aaaaacaatt tacttcttta cattatacgg ctcctggaac agaccttaca
    11041 attggtcttc caaaaaacca tctttgggtt ggcgctggca gtaagaataa aaaaggacat
    11101 gaatttatgg ccaatatgcc aacagaagaa gtattctgtt gtgcggataa actaaaagtg
    11161 gaaggttatg tttctagtac gaaaccactt agttatgcag gaaatattat cgatgacttc
    11221 aaaatcactt tcgaaaaagg tcgtattgta ggtgtagaag cagcatccgg cgaagaaatt
    11281 ttgaaagatt taatcgcgac tgatgaaggc tcccactatt taggtgaagt ggctctagtt
    11341 ccagaccctt cccctatttc ccaatccggc attttattct acaatacact atttgatgag
    11401 aatgcttcta accacttagc aattggtagt gcgtatgcat ttaatgttaa aggtggcgaa
    11461 gaaatgtctc gtgaagagtt agaagcagct ggtgtgaaca atagtttaac acacgttgat
    11521 ttcatgattg gttcttctga aatggacatt gatggtgtaa ccgaatctgg tgaagttgtt
    11581 cctgttttcc gtaaaggcga ctgggcgttc taatcctttt ttaaaactta tgccttttgc
    11641 gtaaaaccct tgtagctttt ggctttcaag ggttttcgtt tgtttatttt ttacaaaaga
    11701 gagcgaggtg cattggatga aatttagtac atgggacatc aatttaaaag taaggctttt
    11761 tggggaagca ctactcgata tttctttttg gatggtcttc ccctttctaa cgatttactt
    11821 ttcggaaagt attgggcgcg agctgacgag ccttttgctg attatttcgc aagttttggc
    11881 ggttttcaca gctttgcttg gcggttattt tgcggataac tttggtcgta aacggatgat
    11941 gagtatttct gtcattggag aaggttttgg ttttcttgtt tttgcaatag gtgcacttca
    12001 tgttgtggat tctccttact tgagttttgc tggtttcgcg attgcgagtg tttttatggc
    12061 gttttatcag ccagcaagtc aagcgatgat tgccgatgtg gttcctcctg agcatcggac
    12121 gcatatttat tcggtgttct atatgatgat taatattgcg gtcgttattg gccccattct
    12181 tggttcggtt ttattttata atttcacgac agaaacacta cttgcaattg tttgtgcgga
    12241 tttattatta ctatttttat tgcaaaaatt tggtcacgaa acagcccctc ttttagttaa
    12301 tcctgattta caaaaagaag cggttcgaaa aagtattggt gctgttttaa tggaacagct
    12361 aaaaaactat aagattattt ttaaagacaa gattttcttt ctttatattg ttgccgggat
    12421 tattgtttct cagtcgttta tgcaactgga tttacttttc ccactatata ttaaagaagt
    12481 tatcggcgcc tctaacttgt tcgtgtttca ttttacaggt gagcaattgt tcggggttat
    12541 tgtttctatt aatggcttct ttgttgcagc gcttactgtc gttgtcactc gctggatgag
    12601 ccattttaga gaaaaatttg tctttatgaa ttcttctttt ctctatgcga ttgcgatttt
    12661 cttatttggt atttcgacag gaccgtgggg agcgatttgt gccattattc tctttagctt
    12721 cgcggaactg atgactgttg gcttgcaaca aacctttgtt tcacagttag ctccagagga
    12781 taaacgggcg atgtacttct ctgctgctgg acttcgttat acgctgggta aagtcattgc
    12841 tccacttgcg attacacttt cgactttaat tggctatact gggacattta ctattattgg
    12901 tattttagcg ctcattagcg ggctcattta ttactatatg tattcagaat ttgaaaaaca
    12961 gcggcaagtt tcctaataaa aaacggctat ctactctgga tagtcgtttt tgtttgatta
    13021 ctttttttac gatttattta cgaaacaccg aaaatacctg tcatatcgcc attttaaatt
    13081 accttttcat ttcatccatg tttaaataat gcttatatgg tgaaaaaagt ctatactgtt
    13141 agttgtacac ctagaattta ctcgctattt ttaatagaaa gttaggtgtg agaatgtttg
    13201 gaacaacaac tattggaatt gatttaggta ctgcgaatat tttagtttac agtaaagaaa
    13261 aaggcattat actgaatgaa ccttctgtgg tcgcgctaaa tacgaatgat ggaacggtac
    13321 ttgcgattgg ccaggaagca aaagagatga ttggtaaaac gccgacttcg atttctgctg
    13381 taagaccaat gaaggacggt gttattgctg attttgattt aacgagcgga cttttgcgcg
    13441 agattatgcg ccggatttca gttagtggtg tgagaaagcc caatgtggtc gtttgtaccc
    13501 caactggtgc aacgtcagtc gagcgtcgcg ctatttcaga cgcggtaaga tcaactggtg
    13561 ctcgttcagt cgttttaatt gaagaacctg ttgcagctgc aattggtgct gatttacctg
    13621 tcgctgagcc tgtcgctaac gtaattgtag atattggtgg cggcacaagt gagattgcga
    13681 ttatttcata cggcggtgtg gtttcaagca cttcgattcg cacaggtggc gatcatatgg
    13741 atgaagaaat cattcaatac atccgcaaaa attacaacct tttaatcggt caaacaacag
    13801 cagaacgaat taaaatggag cttggttatg cgccgatcga acacgtaaca caaactgcgg
    13861 atatccgtgg tcgcgatttg cttactggct taccaaaaac aatccaagta agctctacgg
    13921 aaatccaaag cgctttagct gaaacattac aacgtatatt agaagctatt cggaatacgc
    13981 ttgaactttg ccccccagaa ttaagtggtg atattgtcga tcgcggcatt attttaagtg
    14041 gtggtggctc cctacttcaa ggtttccgcg actggcttgt acaagaaata gatgtccctg
    14101 tacatatggc tccaagtcct ttggaatccg ttgcaattgg cacaggtaga tccctcgttt
    14161 ttgcagataa attagctaaa aattaattgc agtaagcatc tggtcgcatg gtaacccttg
    14221 cagccagatg cttctttatc ttgctgaaac cccttatttc tggtaaactt atttctggtg
    14281 tctggctttc tggagtcaga taattttata ataagcccat atagttaaac ggatataaca
    14341 agcccctcct aagggctagt tcgtggttcg attccgcgta tgggcgctca gaaaaatccg
    14401 aaagcacttg ataaatcaag actttcggat tttttatcgt tcttatttca aaactttatt
    14461 catacataaa aagttacatc ctttttcttc gctgaaaaat tcaacgcata ttcagcatca
    14521 tccgaaaatg gtctggaagc aatttttact ctagtataat cacaatta
//
LOCUS       DASDYK010000067        14533 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.067, whole genome shotgun sequence.
ACCESSION   DASDYK010000067 DASDYK010000000
VERSION     DASDYK010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14533
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.067"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            169..2340
                     /locus_tag="U0308_001922"
     CDS             169..2340
                     /locus_tag="U0308_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HEM2316883.1"
                     /translation="MKQEKVQDLVNQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLL
                     QEMKLTDAHTENAGSVLGSSSALDMIGIQEAYLKTNRLGIPLVFMADVIHGYKTVFPI
                     PLALGCSFDRETVRVMAEVSALEATADGHHVTFSPMLDLVRDPRWGRVMESTGEDPFL
                     NSELGKAMVDGYQGDASKLHENLEQMAACVKHFAAYGAAEAGLEYNTVNMSTRELYQN
                     YLPAYNAAIQAGAKLVMTAFNVVDGIPATMNKWLNRDVLRDEMGFDGVLISDWGAVAE
                     VINHGTARNPKEAAQFSMEAGVDLEMMTTCYIHELKGLIEEGQLSESLLDEAVLRMLT
                     LKNDLGLFEDPYRGLKNNDRTKDILTDDSRGKARAAGIESAVLLENKNRLLPLAKEAK
                     IALVGPLATSPDILGGWNVYGEEKDGINVETGLREVFETVEVVSTEYTELSEEDKVAV
                     KAAVENMDVVVLALGEKNEWGGEAGSLATIRLPEAQYELAKFVQTLGKPVVITLFNGR
                     PLEVKELAESSDALLELWFPGTEAGRVTADLLSGASNPSGKLSMSFPQTTGQIPVYYN
                     HLRTGRPQTPENKGERYVSHYLDIPNEPFYPFGYGKSYSEFELKTSSLPKELNLGESL
                     HVEVTIKNISDIAGKEVIQVYLQDVTASISRPVKELKAFEKVALQAGEEKTVRFELTS
                     EAFSFYNQQLEKVQEPGLHRVFVGTSSEDVDVFEVEVGGYV"
     gene            2337..5597
                     /locus_tag="U0308_001923"
     CDS             2337..5597
                     /locus_tag="U0308_001923"
                     /EC_number="2.4.1.333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-beta-oligoglucan phosphorylase"
                     /protein_id="HEM2316884.1"
                     /translation="MTMLKEIKKADLSAAFYPSGELAWLKWKDIMLNQVIQNPLENRL
                     SQIYVRAHLGDKIEIYPLLSRDAEVGFNENGVEYRGVVGPFRYSVQMHFHTRGWFYDV
                     SVDGDLEFDFVYLQDLGLAEQAAVRTNEAYMSQYIDYHVTEGATGFTVQARQNQPQSE
                     RFPAVQIGALTKIVGYATDGFDIYGTNYKLTSELANLKEKSLPNRVYQYEFAQISLQT
                     ELFTNHGETSFYGYATENQPKASGAPIENLAELKSNISGQSYQTSTKATLNKHIGTPI
                     IGETISDNWLQENFPDRIQEEQQNGDLLSFFTPNYAHVVMREKEAELERPHGSILLDK
                     VDVLNPEATLSATTYMYGAFLSQLVAGNTNMNKWNSHARNPLNILQTSGLRIYIELDS
                     ELRLLGVPSVWETSTNYSTWYYQWNDDLITVKTTLTAESKEAFVTVHSEKGRSYKLVL
                     TNQVTMGTNEYDTTVKKEVKEGIVTYFPAEDSPILETYPALQFRVDGTYNELTDERYF
                     AKEYVGTAGLDVFVFEPSDKATFHVQAKLTDEFSEPTEDLEANNKVIRASYDELTAQF
                     HLNHQSTTAEKLNLTVYWYAHQMLVHYASPHGLEQYSGAAWGTRDVSQGPFEFFLATG
                     NKAVLRKLVLTIFSHQYQDTGDWPQWFMFDKYTSIQQEESHGDVIVWPLKIIGDYMEM
                     SGDTGILEEAIPFVDRESKTFTKEQGTLLEHIELAVETIEARFMKGTALSNYGDGDWD
                     DTLQPANAQLKKNMVSSWTVALTYQTFKRLAAFLPVGEKYETLANNVQADFAKYMTND
                     TDVIPGFLYLEEGKAPVWMIHPEDKDTNIKYRLIPLTRSVISELVDKKQASRNFEIIG
                     EHLLHPDGVRLMSEPAHYAGGVSTHFKRAEQAANFGREVGLQYVHAHIRYIEALAKIG
                     DKSAWHMLDVINPINIKEVVPNAALRQSNTYFSSSDAAFLDRYQAQNEFSRVKEGSIP
                     VKGGWRIYSSGPGIYLHQLISSVLGIRQTEDALIFDPILPEELDGLECHIELDNYPLD
                     LTFESADEGSIVVNGEKQPVENEANLYRTGALVLPKKNLTTKCSQITIKFSKNNRL"
     gene            5645..6610
                     /locus_tag="U0308_001924"
     CDS             5645..6610
                     /locus_tag="U0308_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2316885.1"
                     /translation="MVGIKDIAKKAGVSISTVSYALNGSPKVTEKTRKRIMTIANELN
                     YIPNMAARTLKTRETKIIGVYLTNYGGIFYGTLLEGLTQTLYKHGYELIACSGTKTHR
                     FLPEKMIDGAIILDANFPSSEIINYANRGHKLVVLDRELTHENVSQVLLDNKGGATLA
                     IDYLSTNFKGDFYVITGPEDSYDARVRLETAKQELARSGDKKVHIIEGDFSEESGEKA
                     AAIITENWKAPVSVFALNDNMAIGMYRYFAGTDLEIGKDVRIIGFDNTDISEYLVPRL
                     ATIEYSKYKWGAVAADKLVELLEGGKAENEIIYTTRISGPSVSNN"
     gene            6670..7653
                     /locus_tag="U0308_001925"
     CDS             6670..7653
                     /locus_tag="U0308_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2316886.1"
                     /translation="MKLGIMGTNWITDSFIEGAINSGEWNLTAVYSRTEEKARAFGEK
                     YGDLTYFTDIEEMGKSDALDAVYIASPNALHYQHAVSLLKNKKHVIVEKPIFSTVAEL
                     EHAHQIARENNVFLFEAARHIQEPNFKRLQENIEKVGTIHGATLAYMKYSSRYDQVLN
                     GEEPNIFSLKFSGGSIVDLGVYPLYSAITLFGEPIKATYFATKLPTGVDGLGPIILEY
                     PTFNITIIQGKNSQSFLPSEIYGQKGTLIVDPLTGIEKITFYDNATKEETELAGPVVA
                     NDMQFEAAEFARIIEQSDRDTYEYLADLSLKVLRVSNELRHQNDIWFDAEK"
     gene            7787..9115
                     /locus_tag="U0308_001926"
     CDS             7787..9115
                     /locus_tag="U0308_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM2316887.1"
                     /translation="MTESNIPSFWAEKWQEHGYETPTEIQSAMYQPIKDGADVLAVSP
                     TGTGKTVAYALPTLEKIEAIPKTQWLVLAPSHELVMQITEVIRSWLPSDELTVISLIG
                     GANVKRQIEKLKKKPQIIVASPGRALELIKQKKIKMHEIKTITLDECDQLLRQENFKS
                     TLEIVESAVRDRQLTLVSATKLENPDMFFAQTENTPVMLEVTAKPEELTNVEHLYMDV
                     ESRDKATLLRRISHIKDMRGLVFVKDKPRMEILLEKLHYDKVKAAGIHGEIRKEKRKK
                     YLDDFKKGTLTYLIVTDVAARGLDIEDLPYVIHYDLAASEKEYTHRSGRTGRMGKSGT
                     VITFANPREIRTLKQYLTIHNLKGKQVRFYQGKLLDGAVPENKIAKKASRLPKQVQKG
                     KKDDVKKPFRKDKPTETAGKRKDKPTNASKPTRNNKPNKFNKKPTNFKRS"
     gene            9249..11927
                     /locus_tag="U0308_001927"
     CDS             9249..11927
                     /locus_tag="U0308_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HEM2316888.1"
                     /translation="MSSRKEEVLQLLNEKEEKVSAADVAELLQMDRANASRYLNDLFK
                     EKRIDKLPGKPVFYQAIKKAERASQHAGNIQESAFGRLIGSEDSLKVSIQQAKAAILY
                     PPNGLHSLILGRTGTGKSLFAECMYQFAKESETIPADAPFVSFNCADYAQNPQLLFGH
                     IFGVIKGAYTGAEETREGLLKKADGGILFLDEIHRLPPEGQEMLFTFIDKGEFRPLGE
                     SANVHHAQVQIIGATTESPDNFLLETFTRRIPMTITLPSLAERNLEERYQLVEFFLNQ
                     EATRLHQSIRVHRKALIAFLLYHASANVGQLQRDLKLACAKAFLHYKTKTANYILIEQ
                     DDLPIHVQKGLLHLKDEPEKLNRLIDVNKAIFKFVDTSDEFVETEDVHDVYHAIQEKA
                     DQLMKEGKDQSELEEALYVDVDQYFHNYMVQLPTHQTAKEIIAPAVWELTEKVYAMAE
                     EKLNRKYNEKMKFAFSLHLQSTIERVREQKHIIHPDLNNIRKKYPKEFQVAIDLSALI
                     EQELSIEIPFDEIGFLTMFLTEEVVDTSLSQENQVEVIVMMHGRSTATSMVETVQELL
                     SIESGIALDMPLTVEVKAMYEKLKQMVIKLNPVKGVLILSDMGSLTSFGNMLTEELGI
                     RTKTVTMVSTPVVLEAMRKASLGRGLEDIYQSCEQLFENKYKAHVLRAKPVKNAVIFT
                     CFTGEGVAEQLRKVVAPIIDETKIEIIVLQFLHKEAFRERIDQLMEEYNILAIMGSVA
                     FEYRDIPFFSALEVLSEGGLGIVSRILNDEVPYEKLIASLEGNLQAVSSAEQLVYFLR
                     KVISELQLQLNVILESGVDIGMILHLAFLIERVKLGAVDREFPDLNEFAKNHMVEMQI
                     TQQMMENVEIEYDIVIPQSEIAYLTQMMLSNQVEEN"
     gene            12087..12395
                     /locus_tag="U0308_001928"
     CDS             12087..12395
                     /locus_tag="U0308_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2316889.1"
                     /translation="MNNIMLVCSAGMSTSLLVKKMTEAIEKQQVDAAVIAVAEADFDK
                     YKGNVDVVLLAPQVRFLEKNLKRVLDPLGIPVAIINGIDYGTMDGEKVLNDALAMIEK
                     "
     gene            12465..12767
                     /locus_tag="U0308_001929"
     CDS             12465..12767
                     /locus_tag="U0308_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2316890.1"
                     /translation="MELEQTIMQLIVHGGNAKSDAMLAIEAAKKGDFDAADEQIKSAE
                     AALLEAHHSQTSLIQGEARGEKAEVSLLLVHAQDHLMNAITFKDLAKEIVDLYRSK"
     gene            12789..13877
                     /locus_tag="U0308_001930"
     CDS             12789..13877
                     /locus_tag="U0308_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF871 domain-containing protein"
                     /protein_id="HEM2316891.1"
                     /translation="MRKLGISVFPQHVALEESLEYIETAAKYGFSRIFTCLISANDEA
                     EFAKLETICKRAKELGFDVIADVDPTVFESLNITYKELDRFKELGLAGLRLDLGFSGS
                     EEAAMSFDDTDLKIELNISNGTRYVENILSYQANVGNIIGCHNFYPRKYTGLSREHFL
                     RTSKQFKDLNLRTAAFISSNSGEFGPWFVVDGGLPTMEEHRGVDITVQAKDLWNTGLI
                     DDVIVGNMFASEDELRALSELNRNELQLAVEFLDGATDVEKEIVLTQKHFNRGDASEY
                     VLRSTMTRVNFKQFDFPAHDTNTIAKGDVTIDNDGYERYKGEMQVALQEMENSGNTNI
                     VARIVPEERYLLDTILPWQHFRLVEKKK"
     gene            complement(13969..>14533)
                     /locus_tag="U0308_001931"
     CDS             complement(13969..>14533)
                     /locus_tag="U0308_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003739154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2316892.1"
                     /translation="TLKKKTAIIQAALSLFGEQGFSDVSIKDIAALADVSQVSIYNYF
                     GSKEALVGECASIIMQDTITLAEEILASEGTFTQKLERALQLCNAEINLSLSKFISQE
                     ASKDAQFITLLVNNINALKNEIYMKYIAIGKQEKIIDNRLSDQSIQLFIEAINGLGFT
                     VPEEELEEKQAEIVQLFLYGLIGKCKE"
BASE COUNT         4936 a         2598 c         3038 g         3961 t
ORIGIN      
        1 ttttttctgg ataaactttt acgaaaacga gatagtatag aagaaaaaga aaaaaaggag
       61 cgtttcacca tgtgaatgtc gtttttggtt gactaaagaa aagaaagcgc ttatactgtt
      121 gttatatttg aatagaaacg tttcgaaaaa agtgttcagg aggttcctat gaaacaagaa
      181 aaagtacagg atttagtcaa tcaaatgaca ttagatgaaa aaatcgctca atgtcttcaa
      241 ctttcccctt ttctttttaa aggtacaaac aaaaatgcag aactaacagg gccgcttctt
      301 caagaaatga aattgacgga tgcgcatacg gaaaatgcgg gttcggtgct tggatcaagc
      361 tcggcgcttg atatgattgg tattcaggaa gcttatttaa aaacgaatcg attaggaatt
      421 ccgcttgttt ttatggcgga tgtcatacac gggtataaaa cggtatttcc tattccgctt
      481 gcacttggtt gttcttttga ccgggagact gttcgagtga tggcagaagt ttcggcgctc
      541 gaagcaacgg cagatgggca tcatgtcact ttttcaccaa tgcttgattt agtacgggac
      601 cctcggtggg gacgtgtgat ggaatcaact ggtgaggatc catttttaaa tagtgaactt
      661 ggaaaggcaa tggtagatgg ttaccaaggc gatgcgagta aactacatga aaacttggag
      721 caaatggcgg catgtgtcaa acattttgcg gcatacgggg ctgcggaggc tgggctggaa
      781 tacaacacag ttaatatgtc tacgcgcgaa ctttatcaaa attatttacc agcttataat
      841 gccgcaatac aagctggagc taaattagtc atgactgctt ttaacgtggt agacgggatt
      901 ccagcaacaa tgaacaaatg gcttaaccga gatgttctac gagacgaaat gggttttgac
      961 ggtgtactta tttctgactg gggcgctgtt gccgaagtaa ttaatcacgg aacagccaga
     1021 aatcctaaag aagccgcaca gttttcgatg gaagcaggcg ttgatttaga aatgatgacg
     1081 acttgttata tccatgaatt aaaaggttta attgaagaag gccaattatc cgaaagcctt
     1141 ttagatgaag cagtacttcg gatgttaact ttaaaaaatg atttagggct atttgaagat
     1201 ccctatcgcg gattaaaaaa taacgaccgc acaaaagata ttttaaccga tgatagccgc
     1261 gggaaagctc gggcagcagg tattgaatct gctgtgttat tagaaaataa aaaccgatta
     1321 cttccactgg ctaaagaagc aaaaattgcc ttggttggtc cacttgcaac gtcgcctgat
     1381 attctcggtg gttggaatgt atacggtgaa gaaaaagatg gcatcaatgt tgaaacaggt
     1441 ttgcgtgaag tatttgaaac ggtcgaagtc gtttcaacgg agtacactga attgtcggaa
     1501 gaagacaaag tggcagtgaa agcggcagta gagaacatgg atgttgtcgt gcttgcccta
     1561 ggtgaaaaaa atgaatgggg cggggaagca ggaagtcttg ctactatacg cttgccggaa
     1621 gcacaatatg aattagcgaa attcgtccaa acattaggaa aaccagttgt tattacatta
     1681 tttaatggta gaccgctcga agtgaaagag ttagcagaat ctagtgatgc tcttcttgaa
     1741 ttatggttcc cagggacaga agcaggccgt gtcactgcag atttattaag tggtgcaagt
     1801 aatccttcgg ggaaattatc catgtcattc ccgcaaacaa ctggtcaaat tccggtttat
     1861 tataatcatt tacgcactgg acgaccacaa acaccggaaa ataaaggcga acgctatgtg
     1921 tcgcattatc ttgatattcc aaatgaacca ttttatccat ttggttacgg aaaaagctat
     1981 agcgaattcg agttaaaaac aagcagtctt ccgaaagaac taaatctagg tgaatcacta
     2041 catgtggaag taaccattaa aaacattagt gatattgctg gaaaagaagt aatccaagtt
     2101 tatttacaag atgtgacagc gagcatttca cgaccagtca aagaattaaa agcttttgaa
     2161 aaagtagcgc ttcaagctgg cgaagaaaaa acagttagat ttgaattaac aagcgaggca
     2221 ttttcattct ataaccagca gcttgaaaaa gtgcaggaac cgggacttca ccgagttttt
     2281 gttgggacta gtagtgaaga tgtagacgtt tttgaagtgg aagtgggtgg atatgtgtga
     2341 caatgttaaa agaaattaaa aaagcggatt tatcagccgc attttatccg agcggagagc
     2401 ttgcttggtt aaaatggaaa gatattatgt taaatcaagt gattcaaaat ccattagaaa
     2461 accgcttgtc gcaaatatat gtacgcgcgc atttaggaga taaaatagaa atttatccac
     2521 tacttagcag agatgcggaa gttggtttta acgaaaatgg cgtggagtat cgcggtgtag
     2581 ttggaccgtt tcgttatagt gtgcaaatgc attttcatac gcgcggttgg ttttatgatg
     2641 tctcagtgga tggggatctt gagtttgatt ttgtttactt acaagacttg gggcttgcag
     2701 aacaagcagc agtgagaaca aatgaagctt atatgtcgca atatattgat tatcatgtga
     2761 cagaaggcgc gactggtttc acggttcaag cccgccaaaa tcaaccacaa agtgagcgtt
     2821 tcccagcagt tcaaattgga gcattaacga aaattgttgg gtatgcaaca gatggttttg
     2881 atatttatgg aacaaattat aaactgacta gcgaactagc gaaccttaag gaaaaatcat
     2941 tgccaaaccg agtctaccaa tatgaattcg ctcaaatatc cttacaaaca gagctattta
     3001 ctaatcacgg tgaaacaagc ttttacgggt atgcaacaga aaatcaacca aaagcatctg
     3061 gagcaccaat cgaaaattta gcggaactaa aaagtaatat ttcagggcaa tcttaccaaa
     3121 caagtactaa agctacacta aacaaacaca taggaacacc gattatcggt gaaacaattt
     3181 ctgacaactg gcttcaagag aacttcccag accgaattca agaagagcaa caaaacggcg
     3241 atctactttc ctttttcaca ccaaattatg cccatgttgt gatgcgtgaa aaagaagcag
     3301 aattagaacg cccgcatggc agtattttgc ttgataaagt ggatgtttta aatccagaag
     3361 cgacactttc ggcaacaacg tacatgtatg gggcattttt atcacaatta gttgctggaa
     3421 atacgaatat gaacaaatgg aatagccatg cgcgtaatcc gcttaatatt cttcaaacaa
     3481 gtggattaag aatttatatc gaattagatt ccgaacttcg actactcggt gtgccgtctg
     3541 tctgggaaac tagtacaaat tactcgactt ggtattatca gtggaatgac gacctaatta
     3601 cggtaaaaac cacattaaca gctgaaagta aagaggcatt cgtcactgtt cattcggaaa
     3661 aaggtcgctc atataaatta gtcttaacaa atcaagtaac tatggggaca aatgaatacg
     3721 atactaccgt gaaaaaagaa gttaaagaag gaatcgtcac ttatttccct gcagaagact
     3781 cgccgatttt agaaacctat ccggcgcttc aattccgcgt agatggaact tataacgaac
     3841 tgactgacga acgttatttt gcaaaagaat atgtgggaac agcaggtttg gatgtgtttg
     3901 tttttgaacc aagtgataaa gcgactttcc acgttcaagc aaaactcact gatgaatttt
     3961 ctgaaccaac agaggattta gaagcaaata acaaagtaat tcgcgctagc tatgacgaat
     4021 taactgcgca gttccattta aatcatcaaa gtacaacagc ggagaaactg aacttaacgg
     4081 tttattggta cgcgcaccaa atgttagttc actatgcttc accacatggg ttagaacagt
     4141 acagcggggc ggcctggggt acgcgtgatg tgagccaagg tccatttgaa tttttccttg
     4201 caacaggcaa taaagctgtt ttacgtaagc tagtgttgac gattttttct catcaatatc
     4261 aagatactgg tgattggcca caatggttta tgtttgataa atatacatcg attcagcaag
     4321 aagaaagcca tggcgatgtt attgtttggc ctctgaaaat tattggtgat tacatggaaa
     4381 tgagcgggga tacagggatt ttagaagaag ctattccttt tgttgatcgc gaatcgaaaa
     4441 cctttacgaa agagcaagga actcttcttg aacacatcga acttgcagta gaaacgattg
     4501 aagcccgctt tatgaaagga acggctcttt ctaattacgg cgatggtgac tgggatgaca
     4561 cacttcaacc agctaatgcc cagctgaaga aaaacatggt gtccagctgg acggtcgcgc
     4621 taacatatca aacatttaaa cgtttagctg catttttgcc agtaggtgag aaatacgaaa
     4681 cattagcaaa caatgttcaa gcggactttg cgaaatatat gacaaatgat actgatgtta
     4741 ttccaggttt cctatattta gaagaaggaa aagcacctgt atggatgatt cacccagaag
     4801 acaaagatac gaatattaaa tatcgcttaa taccactgac gagaagtgta atttctgaat
     4861 tagtcgataa aaagcaagcc agtcgcaatt ttgaaattat tggtgagcat ctacttcatc
     4921 ctgatggcgt aagattaatg agtgagccag cgcattatgc tggtggtgta agtactcatt
     4981 ttaaacgggc agagcaagca gccaattttg gtcgagaagt cggtttgcaa tatgtgcacg
     5041 cgcatattcg ttatattgaa gctttagcaa aaattggcga taaatccgct tggcatatgc
     5101 tggatgttat taatccaatc aacataaaag aagttgtccc aaatgcggca cttcgtcaaa
     5161 gtaatactta tttcagtagt tctgatgcag cgtttttaga tcgctatcag gcgcaaaatg
     5221 agtttagtcg tgtaaaagaa ggtagtattc ctgtgaaagg cggctggcgg atttattcta
     5281 gtggcccagg aatctattta catcaattaa taagttctgt tcttggtatt cgccaaacgg
     5341 aagatgcgct tatttttgat ccaattttac ctgaagaatt agatggatta gaatgtcata
     5401 ttgaactaga taattatccg cttgatctta ctttcgaaag tgcggatgag ggttctattg
     5461 tcgtgaatgg tgaaaaacaa ccagttgaaa atgaagcgaa tttgtaccga actggcgcac
     5521 tcgttttacc gaaaaagaat ttaacgacaa aatgttcaca aatcacgatt aaattttcaa
     5581 aaaataaccg tctctaaggt tgttttgtgt ataataaaag aaaacagaaa aggatgcgat
     5641 tcacgtggta ggaattaaag atatcgcgaa aaaggcaggg gtttccattt caacagtatc
     5701 ctacgcgctt aatggcagcc cgaaagtgac cgaaaaaacg cgaaaacgaa ttatgaccat
     5761 cgcaaatgaa ttgaattata ttcccaatat ggcagcacga acgttaaaaa caagagaaac
     5821 aaaaattatc ggcgtctatt taacgaatta cggcgggatt ttttacggga ctttactgga
     5881 aggtttaacg caaacgctat ataaacatgg atatgaactc atcgcttgca gtggcacgaa
     5941 aacacaccga tttttacccg agaaaatgat tgatggcgct attattttag atgcgaattt
     6001 cccgtctagc gaaatcatta attatgctaa tcgtggtcat aaattagtgg tgcttgaccg
     6061 cgaacttacc catgagaacg tgagccaagt ccttctagat aataaaggcg gcgcaacgct
     6121 agcaattgat tatttatcta ctaattttaa aggtgatttc tatgtcatta ccggtccaga
     6181 agattcttat gatgcaagag tcaggctcga aaccgcgaaa caagaactcg ctcggtcagg
     6241 tgacaaaaag gtgcatatta ttgaaggaga cttttccgaa gaaagtggcg aaaaagcagc
     6301 agccattatc acggaaaact ggaaggcgcc tgtttctgta tttgccctaa atgataacat
     6361 ggctattggg atgtatcgtt attttgcagg gacagatttg gaaatcggca aagacgtacg
     6421 aattattggc tttgataata cggatataag tgagtatttg gttccacgtc ttgctactat
     6481 cgaatactcg aagtacaaat ggggcgcagt tgccgcagat aaactagtgg aactccttga
     6541 aggtggaaaa gctgaaaacg aaataatcta tactactaga atcagtgggc catctgtttc
     6601 aaacaattag tacgcttttt tccttatttt aaggtatact taagataaaa tgaagggagc
     6661 tgttggctaa tgaaacttgg aattatggga acgaactgga ttacggattc ttttattgaa
     6721 ggtgctatta attcaggtga atggaatctt actgcggtat attcgcgcac agaagaaaaa
     6781 gcacgcgcat ttggagaaaa atatggggac ttgacttatt tcacggatat agaagaaatg
     6841 ggcaaatcag atgcacttga tgcggtctac attgcttctc ctaatgcgct ccattatcaa
     6901 catgcggtta gcttactgaa aaataaaaaa catgttatcg tagaaaaacc gattttttct
     6961 accgtagccg aattagagca tgcgcatcaa attgctcgcg aaaacaatgt ctttttattt
     7021 gaagcagcgc gccacattca agagccaaac ttcaaacgcc tacaagaaaa catcgaaaaa
     7081 gtaggtacta ttcacggggc aacactagcg tacatgaagt attcttccag atacgatcaa
     7141 gttttaaacg gtgaagaacc aaacatcttc tccttgaaat tttctggcgg atccatcgtt
     7201 gacttaggtg tctatccatt atattcagcg attacactat tcggtgaacc cataaaagca
     7261 acttattttg ccactaaatt accaactggt gtagacggac ttggaccaat aattctcgaa
     7321 tacccaacat tcaatattac tatcattcaa gggaaaaact cacagtcctt cctgccaagc
     7381 gaaatttatg gtcaaaaagg aacactaatt gtcgatccac ttactggaat tgaaaagatt
     7441 actttttacg acaacgcaac aaaagaagaa acagaacttg ctggtccagt tgtagccaat
     7501 gatatgcaat ttgaagcagc agagtttgct agaattatcg aacaaagcga ccgagataca
     7561 tatgaatact tagcagacct aagcttgaaa gtattacgtg tctccaacga acttcgtcac
     7621 caaaatgaca tttggtttga cgcagaaaaa taattttgaa gagctaggaa aaggctttcg
     7681 ggctgttttc tagctctttt tctgcgcaat gtaaattcta aataaaagtg cagacttgca
     7741 gtaagcatgg tatgatacag agaagaacta ataaaggagt cgggtcatga cagaatcaaa
     7801 tatcccaagc ttttgggcgg aaaaatggca agaacatggt tatgaaacgc caacagaaat
     7861 tcaaagcgca atgtaccaac caatcaaaga cggtgcagat gtacttgcag tatcaccaac
     7921 tggaacgggg aaaacggtgg cttatgcact gccaaccctt gaaaaaatag aggcaattcc
     7981 aaaaacacaa tggcttgttt tagcgccatc acatgaatta gttatgcaaa tcacggaagt
     8041 aattcgttcg tggttgccaa gtgatgaact cacagtaatc tctttaatcg gaggagccaa
     8101 tgtcaaacgc caaatcgaaa aattaaagaa aaaaccacaa attatcgtag cctctccagg
     8161 gcgtgcactt gaactaatca aacaaaagaa aattaaaatg catgaaatta aaacgattac
     8221 gttggacgaa tgcgaccaat tacttcgcca agaaaatttt aaaagcacac ttgagattgt
     8281 tgaaagtgct gttcgcgatc gccaattgac acttgtatct gcgacaaaat tagaaaatcc
     8341 ggacatgttt tttgcacaaa cagaaaacac accagtaatg ctagaggtaa cagcaaaacc
     8401 agaagaatta acgaatgtgg aacacctata catggatgtg gaatcacgtg ataaagctac
     8461 tttactgcgc cgtatttcgc atattaaaga catgcgcggc ttagttttcg taaaagacaa
     8521 accacgaatg gaaattttac tagaaaaact tcattacgat aaagtaaaag cagctggaat
     8581 tcacggcgaa attcgcaaag aaaaacgcaa aaaatatctg gacgacttta aaaaaggcac
     8641 gttgacttat ttaatcgtga cagatgtagc ggctcgtggg ctagacatag aagatttacc
     8701 ttacgtgatt cactatgact tagcagcaag tgaaaaagag tacacgcacc gttctggacg
     8761 gactggacga atgggtaaat caggtacggt tattactttc gctaacccac gtgaaataag
     8821 aacattaaaa caatatttaa ctatccacaa cttaaaaggg aagcaggttc gcttttatca
     8881 agggaagctt cttgacggcg ctgttccaga aaacaaaatt gccaaaaaag catctagact
     8941 accaaaacaa gttcaaaaag gtaaaaaaga tgacgtgaag aaaccattcc gtaaagacaa
     9001 accaacggaa actgctggaa aacgtaaaga taaaccaact aacgcgtcta aaccgacacg
     9061 taataataaa ccaaataaat ttaacaaaaa accaactaat ttcaaaagat cttaagatgc
     9121 gttgaatgtt tttctctctt gatagatagg aaagcattcg cgcttttttt agttaatttt
     9181 tatcgttgcg aggatgctgt ttaaaaaggt ataatggaaa catagagttt caaaaaggag
     9241 tagagtagat gtctagtaga aaagaagaag tcctccaact tctaaacgaa aaagaagaaa
     9301 aagtatctgc tgcagatgtc gcagaattgc ttcaaatgga cagagcaaac gctagtcgtt
     9361 atctaaatga tctttttaaa gagaaaagaa tagacaaact tcctgggaaa ccggtatttt
     9421 atcaagccat taaaaaagcg gaaagagcta gccaacatgc gggaaatata caagagtctg
     9481 cttttggaag attgataggt tcagaagata gtttaaaagt aagtattcaa caagccaaag
     9541 ccgccattct atacccgcca aacgggctgc acagcttaat tctaggacgg acgggtacag
     9601 ggaaatcact ctttgctgaa tgtatgtatc aatttgcgaa agaatcggaa actatcccgg
     9661 ccgatgcgcc gtttgtttcg tttaactgtg ccgactatgc acaaaatcca caacttttat
     9721 ttggtcacat ttttggggta attaaaggag catatacagg ggcagaagaa acgcgcgaag
     9781 gtttgctaaa aaaagcagat ggcgggattt tattccttga tgaaatccac cgcttgcctc
     9841 cagaaggtca agaaatgctc tttactttta ttgataaagg ggaatttcgt ccactaggtg
     9901 aaagcgcgaa tgtccaccat gcacaagtcc aaattattgg agcgacaaca gaatcaccag
     9961 ataatttttt attagaaaca ttcacaagac gtattccgat gacaattacc ttaccatccc
    10021 ttgcagaaag aaatctggaa gagcgttatc aattagtgga gtttttcttg aaccaagaag
    10081 ctacaagact tcaccaatcc atacgtgtac acagaaaagc gctgattgct tttttacttt
    10141 atcatgcaag tgcgaacgtc ggtcaattgc aaagagactt aaaactagcc tgtgccaaag
    10201 catttttaca ttataaaacc aaaacggcta attatatatt aatcgaacaa gatgacttgc
    10261 ctatccacgt tcaaaaaggt ttactccact taaaagacga accagaaaaa ttaaatcgtt
    10321 tgattgacgt gaacaaagcc atttttaaat ttgttgatac gagtgatgaa tttgttgaaa
    10381 cagaagatgt tcatgatgtt taccatgcca tccaagaaaa agcagatcaa ttaatgaaag
    10441 aagggaagga ccaaagcgag ttagaagaag cactttatgt tgatgtagat caatatttcc
    10501 acaactacat ggtccagtta ccaacccacc aaactgccaa agaaattatt gcgcctgctg
    10561 tttgggaatt aacagaaaaa gtatatgcca tggcagaaga aaaactaaat cgcaaataca
    10621 acgaaaaaat gaaatttgct ttttctttac atttacaaag taccatcgaa cgagtacggg
    10681 aacaaaagca tatcattcat cctgatttaa ataatattcg caaaaaatat ccaaaagagt
    10741 tccaagtagc tattgattta tccgcactga ttgaacaaga attaagcatt gaaattcctt
    10801 ttgacgaaat tgggttttta acgatgttcc tgacagagga agtagtagat acgtcacttt
    10861 ctcaagaaaa tcaagtcgaa gttattgtga tgatgcatgg ccgttcaact gctacgagta
    10921 tggtggagac ggtacaggaa ttactgagca ttgaaagcgg gattgctctt gatatgccgc
    10981 tcactgttga agtaaaagcg atgtatgaaa aattaaaaca aatggtcatt aagttaaatc
    11041 ctgtcaaagg cgttctaatc ctttctgata tgggttccct cacttctttc ggcaacatgc
    11101 tgaccgaaga actgggaatc cgtacaaaaa ccgttacgat ggtaagtaca ccagttgtac
    11161 tggaagcgat gcggaaagct tcacttggtc gtggtttaga agatatttat caaagctgtg
    11221 agcaattatt tgaaaataaa tataaagcgc atgtcttacg cgctaaacct gtgaaaaatg
    11281 cggttatctt cacttgtttt actggagaag gagtagccga acagttgcgt aaagtcgtag
    11341 caccaattat tgatgaaaca aaaattgaaa ttattgtatt acaattcttg cataaagaag
    11401 cttttcggga gcgaattgat caactcatgg aagaatataa tattctagcc atcatgggat
    11461 cagtagcctt tgaatatcgc gatatcccat tctttagcgc actggaagtt ctatcagaag
    11521 gtgggttagg gattgtttct agaatattaa atgatgaagt accttacgaa aaattaatcg
    11581 cttcattaga aggaaattta caagcagtaa gctctgctga acaactggtt tactttttac
    11641 gaaaagtaat ttcagaattg caattgcaac ttaatgttat acttgagtca ggtgtggaca
    11701 ttggtatgat tctacactta gctttcctca tcgaacgcgt gaaattaggc gctgtcgacc
    11761 gggaattccc agacttaaat gaatttgcca aaaatcatat ggtggaaatg caaattacac
    11821 aacaaatgat ggaaaacgta gaaattgagt atgatatcgt aataccgcaa tcagaaatcg
    11881 catatttaac acagatgatg ctctcaaacc aggtggaaga aaattaagaa aaaggaatct
    11941 gccaagtgtg tattgtctta cacacttggc ttttttactt gtgtaagcga aaaactttgt
    12001 aggcaagcaa caaattagaa gaaaagttgg cacatatctt gcatattata tatacgtgca
    12061 gcttttcaaa ctaggaggtt aagttaatga ataacatcat gttagtttgt tcggccggta
    12121 tgtccacaag tctgctcgta aaaaaaatga cagaagctat cgaaaaacaa caagtggatg
    12181 ctgctgtaat agcagttgca gaagctgatt tcgacaagta taaaggcaac gtagatgttg
    12241 ttttactcgc accacaagtt cggtttttag agaagaattt gaagcgagta ctggatccat
    12301 taggtattcc agttgcgatc attaatggaa ttgactatgg aacaatggac ggcgaaaaag
    12361 tgctaaatga tgcactagca atgattgaga aataatctcg agttcgagac tgcttgaaga
    12421 ggaattaaac acaagttcga taaatgaaaa aggatgtgta aacaatggaa ttagaacaaa
    12481 caattatgca attaatcgta cacgggggaa acgctaaaag tgacgcaatg ctagcaatcg
    12541 aagcggcaaa aaaaggggat tttgacgcgg cagatgagca aatcaaaagt gcagaagcag
    12601 cactacttga agcgcatcat tcacaaactt cattaattca aggggaagca cgcggcgaaa
    12661 aagcagaagt atctttacta ctagttcacg cacaagatca cttaatgaat gctattactt
    12721 ttaaagattt agcaaaagaa attgttgatt tataccgttc taaataagct tttgaaggga
    12781 tgatttaaat gagaaaatta ggaatatccg tatttccgca acacgtagcg cttgaagaat
    12841 cattagaata tattgaaaca gctgcaaaat atggttttag ccgtatcttc acttgcttga
    12901 tttctgctaa tgatgaagct gaatttgcta aattagaaac catttgcaaa cgcgcaaaag
    12961 aattaggatt tgacgttatt gctgatgttg atcctactgt atttgaatcg ttaaatatca
    13021 cttataaaga attagatcgt ttcaaagagc tgggtctagc tggattacgc ctagatttag
    13081 gtttctctgg ttccgaagag gcagcaatgt cctttgatga tacggacttg aaaatcgagc
    13141 taaacattag taatggtact cgctacgttg aaaatatcct atcttaccaa gcaaacgtag
    13201 gaaatatcat tggttgtcac aacttttatc caagaaaata caccggtctt tccagagagc
    13261 atttcttgcg cacgagtaaa caattcaaag acttaaacct acgtacagct gctttcatat
    13321 cttctaacag tggcgaattt ggcccttggt ttgttgtaga cggcggactt ccaacaatgg
    13381 aagaacatcg cggagtggac attactgtgc aagcaaaaga cctttggaac actggcctga
    13441 ttgatgacgt catcgttggg aacatgttcg cttcagaaga cgaattacgc gctttaagcg
    13501 aattaaaccg taatgaatta caattagcag tagagttttt agacggtgca acagacgtgg
    13561 aaaaagaaat cgttttaaca caaaaacatt tcaatcgtgg cgatgcttcc gagtatgtgt
    13621 tacgttcaac aatgacgcgt gttaatttca aacaattcga tttccctgca cacgacacaa
    13681 atactattgc aaaaggcgat gtgactatcg ataacgacgg ctacgaacgc tacaaaggcg
    13741 aaatgcaagt agcacttcaa gaaatggaaa actccggcaa caccaatatc gttgctcgaa
    13801 ttgttccaga agaacgttat ctactagaca ccattctacc gtggcaacat tttagattgg
    13861 ttgagaagaa gaaataataa aaattacaag ttaaaaaacg tctgcaatcc atttttcaat
    13921 gttgattgca gacgttttat tttgtcgaaa attaatatgt tgcttgattt attctttaca
    13981 tttcccaatc aacccataca aaaacaactg cactatctcc gcttgtttct cctcaagttc
    14041 ttcctctggg actgtgaaac ctaaaccatt aattgcttca ataaaaagtt gaatagattg
    14101 atccgaaaga cggttatcaa taattttttc ttgcttgccg atagcgatgt atttcatata
    14161 aatctcattt ttaagtgcat taatattatt cactaacagc gtgataaatt gcgcgtcttt
    14221 gcttgcttct tgcgatataa atttacttaa agacagattt atttctgcat tacagagctg
    14281 gagagcccgc tctaattttt gcgtgaatgt tccttctgat gctaaaattt cttccgctaa
    14341 agttatggta tcttgcataa taatgctagc acattcacca acaagcgctt ctttacttcc
    14401 aaaataatta taaatagaca cttgcgaaac atctgcgagg gcggcaatat ctttaatact
    14461 tacatcagaa aaaccttgtt ctccaaataa tgaaagagct gcctgaataa ttgcagtctt
    14521 cttttttagc gtt
//
LOCUS       DASDYK010000068        14339 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.068, whole genome shotgun sequence.
ACCESSION   DASDYK010000068 DASDYK010000000
VERSION     DASDYK010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14339)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14339)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14339
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.068"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(115..2109)
                     /gene="tkt"
                     /locus_tag="U0308_001932"
     CDS             complement(115..2109)
                     /gene="tkt"
                     /locus_tag="U0308_001932"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEM2316893.1"
                     /translation="MFDNTDSLAVNTIRTLSMDAIQKANSGHPGLPMGAAPMAYALWS
                     RVLNTNPKNSHWFNRDRFVLSAGHGSMLLYSLLHLSGFKLELEDLKNFRQWESKTPGH
                     PEYRYTDGVDATTGPLGQGIAMAVGMAMAERHLEAKYNKDGFPVVDHYTYALCGDGDL
                     MEGVASEAASYAGHQQLGRLVVLYDSNDISLDGDLDKSFSENVKQRFEAYGWEHLLVK
                     DGNDTAEILAAIEKAKQNTSQPTMIEVKTVIGFGAPNAGTSKVHGAPLGDEGILEAKK
                     AYGWNYEEKFFVPEEVTARFKETIGERGEKAETAWNELFASYKAEYPELAKQLEDSLN
                     NKLPADWDEDLPVYDDSKALASRASSGEVINALAGKIPTIFGGSADLAGSNNTTIKTD
                     GEFTKATPAERNIWFGVREFAMGAALNGMALHGGLQVYGGTFFVFSDYVRAAIRLSAI
                     QHLPVTYVMTHDSIAVGEDGPTHEPIEQLASLRAMPGLSVIRPADGNEVVEAWKLAIT
                     STSTPHVLVLTRQGLPTLPNSAKLTAEGVKKGAYVISPAKGDVPEAIILASGSEVNLA
                     IEAQKELQAQGTDVSVVSVPSFDLFEQQSAEYKESVLPNAVRKRVAVEMGASFGWERY
                     VGLDGKVIGIDKFGASAPGETVIKNYGFTVENVVNTVKSL"
     gene            complement(2256..2483)
                     /locus_tag="U0308_001933"
     CDS             complement(2256..2483)
                     /locus_tag="U0308_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 domain-containing protein"
                     /protein_id="HEM2316894.1"
                     /translation="MLEKAKIDRINELSKKKKAGTLTATEKVEQDNLRKEYIKSFRTH
                     MKGTIENTTIIDPNGKDVTPHKVKQLRKNKH"
     gene            complement(2577..2906)
                     /gene="yneA"
                     /locus_tag="U0308_001934"
     CDS             complement(2577..2906)
                     /gene="yneA"
                     /locus_tag="U0308_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division suppressor protein YneA"
                     /protein_id="HEM2316895.1"
                     /translation="MTMKLIWDKFYVSIIFVLTCIILGIILMCTVVGGGNDYSEVNVS
                     EGDSLWALADQYAGKSDMAKADFVSWVEKENNLADGHVEAGDSVVIPVHKTKLIKSDS
                     TIQLANQ"
     gene            3063..3677
                     /gene="lexA"
                     /locus_tag="U0308_001935"
     CDS             3063..3677
                     /gene="lexA"
                     /locus_tag="U0308_001935"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEM2316896.1"
                     /translation="MKISKRQQDIYEFIKSEVKEKGYPPSVREIGEAVGLASSSTVHG
                     HLARLEGKGLIRRDPTKPRAIEILSLEDEAETPNVVNIPIIGKVTAGMPITAIENIDE
                     YFPLPEYMAAGETNVFMLEIDGESMINAGILDGDKVIVRQQSSAINGEIVVAMTDENE
                     ATCKRFYKEANHFRLQPENDALEPILLNNVTILGKVIGLYRDIR"
     gene            3708..4232
                     /locus_tag="U0308_001936"
     CDS             3708..4232
                     /locus_tag="U0308_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2316897.1"
                     /translation="MIYFETERLIARDYLASDYLPFSQMNADEQVMKYFPARLTQNES
                     NAFLDRIQEELKSLGYGLFAIEVKSTGEFIGFTGFHEATFEATFTPCTEIGWRLKHSA
                     WNQGYATEAALGALAFAEEINTINEIYSFTAALNKPSENVMKKIHLTKIATFEHPALV
                     NGDPLKPHVLYKKA"
     gene            complement(4266..5561)
                     /locus_tag="U0308_001937"
     CDS             complement(4266..5561)
                     /locus_tag="U0308_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HEM2316898.1"
                     /translation="MQITLAILVFAFTLFFVIWQPRKLSIGWSACGGALIAILLGVVT
                     LSDVATVTGIVWNATLAFIAIIIISLILDKIGFFEWAALHMARLARGNGLLMFILISI
                     LGAFVAALFANDGAALILTPIVLAMVRALNFDEKKVFPFIIASGFIADTTSLPLVVSN
                     LVNIVSADFFGISFSQYALIMWIPTLFSLVASILILYFYFRKALPKKYDMRVIREPAS
                     AIKDKKMFRVSWGILIILVAGYFLSSFLDIPVSFIALLVAVIFLLVSAKSHAVSTKAI
                     LKGAPWNIVFFSVGMYVVVYGLQNVGITKLLSEAITYVAHFGLFAGTVGMGFIAAILS
                     SVMNNLPTVMINALAIDHTSFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVL
                     AQKGIKISWGSYFKIGIVITIPVLFITLVGLYFSLLIWN"
     gene            complement(5705..7039)
                     /gene="glnA"
                     /locus_tag="U0308_001938"
     CDS             complement(5705..7039)
                     /gene="glnA"
                     /locus_tag="U0308_001938"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEM2316899.1"
                     /translation="MAKYTKEDIFRFADEQNVKFIRLQFTDILGIIKNVEIPVSQLKK
                     ALDNKIMFDGSSIEGFVRIEESDMYLFPDLDTWVVFPWTAEKGKVARMICDIYNPDMT
                     PFAGDPRANLKRVLKEMEELGFTEFNLGPEPEFFLFKLDENRRPTLELNDSGGYFDLA
                     PTDLGENCRRDIVLELEEMGFEIEASHHEVAPGQHEIDFKYEDAVTACDSIQTFKLVV
                     KTIARKHGLHATFMPKPLFGVNGSGMHFNMSLFNEKGNAFFDESGELELSQTAYHFLA
                     GMLKHARGYTAVTNPTINSFKRLVPGYEAPCYIAWSGKNRSPLVRVPSSRGLSTRLEL
                     RSVDPSANPYLAMAVLLKAGLSGIKDELTPPAPVDRNIYGMNEEEREATGIYDLPESL
                     GHALIELEKDDIIKAGLGEHIFEHFIEAKTIECDMFRTAVHPWEREQYLEIY"
     gene            complement(7110..7478)
                     /locus_tag="U0308_001939"
     CDS             complement(7110..7478)
                     /locus_tag="U0308_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2316900.1"
                     /translation="MSEKEIRRSMPLFPIGPVMKLTDLTARQIRYYEDQGLIHPARNQ
                     GNHRLYSLQDIDVLLEIKDYLNDGLNIAGIKKMYQMQQKESKEPLTDDDVRKILRKEM
                     QQAGRFVKQDATGKQQLPRF"
     gene            complement(7680..8906)
                     /locus_tag="U0308_001940"
     CDS             complement(7680..8906)
                     /locus_tag="U0308_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine gamma-lyase family protein"
                     /protein_id="HEM2316901.1"
                     /translation="MNNIQAIRKKVETQIDDLQNKTDEIAEFNQAKVLDAFQENKVSD
                     FHFHPSTGYGYDDEGRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDE
                     LLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKTK
                     MIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGAD
                     IIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGF
                     FLAPHVTAQAIKGARFTAAMLAEFGVEADPVWDAPRTDLIQSVSFHNKEKMVAFAQAI
                     QAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLT
                     YEHIKIAVTRAIQKIV"
     gene            complement(8899..10122)
                     /gene="hflX"
                     /locus_tag="U0308_001941"
     CDS             complement(8899..10122)
                     /gene="hflX"
                     /locus_tag="U0308_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEM2316902.1"
                     /translation="MEREKIILVGVILPNKTEEAFWNSMNELHSLAKTANGEVVDELI
                     QKLERVNQASFIGSGKLEELATLVEMHEADVVIFNSELSATQVRNISKAVDARIIDRT
                     QLILDIFAMRAKSKEGKLQVAYAQYKYLLPRLSGQGVSLSKLGGGIGSRGPGESKLEM
                     DKRHIREKMHDIKAQLTHVEQHRKRIIERRNIQSVFRFGLIGYTNAGKSTIFNRLTNE
                     TTLQEDKLFATLDPTTRKIRFSGGFQALLTDTVGFIQDLPTTLIAAFRSTLEETANVD
                     VLIHVVDASNPDYLQHETTVISLLEELEMNHLPTLVIYNKMDHAPATFVPDQPENLLI
                     SALDQEAPDTIKQRMIQLIEKNWAFFTLELSEEKGKELAQIKQQAWVTKLEYIESKQS
                     YHIEGYKPRKELNNE"
     gene            complement(10233..10466)
                     /gene="hfq"
                     /locus_tag="U0308_001942"
     CDS             complement(10233..10466)
                     /gene="hfq"
                     /locus_tag="U0308_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEM2316903.1"
                     /translation="MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFT
                     VLLDVEGKQQLVFKHAISTFSPQKNVALNPDAE"
     gene            complement(10588..11505)
                     /gene="miaA"
                     /locus_tag="U0308_001943"
     CDS             complement(10588..11505)
                     /gene="miaA"
                     /locus_tag="U0308_001943"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEM2316904.1"
                     /translation="MSKIPVIVIVGPTAVGKTSLSIELAKKLDGEIISGDSMQVYRGL
                     DIGTAKITPEEMDGIKHYLIDVTNPSEPFTAAKFQIETRKCIETIHQAGRLPIIVGGT
                     GLYIQSVFYDYDFGNVSEDKAYRAELEQLDKTVLWQMLEQKDPESAAQIHENNKRRVI
                     RALEVMHLTGKPFSEYQVNNVLNDRYQPLFLGLDLDRALLYERINQRVNLMFEEGLVT
                     EAKKLYEQHLVDVPAVRGIGYKELFPYFEGKSSLEEAKELIQKNSRHFAKRQLTWFRN
                     RMDIDWIQAGVSSTESEALNKATTFLTAK"
     gene            complement(11632..13308)
                     /locus_tag="U0308_001944"
     CDS             complement(11632..13308)
                     /locus_tag="U0308_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HEM2316905.1"
                     /translation="MVQLFSAFDRETIERNLQEEKFDLVIVGGGITGAGIALDATSRG
                     MSVALVEMGDFASGTSSRSTKLVHGGLRYLQQFEIKEVADLGKERAIVYENGPHVTTP
                     EWMMLPFHKGGNMGKTTASFGIRLYDYLAGVKKNERRKILSAKETLAKNPFVKKDGLK
                     GSGYYVEYRTDDARLTIEVMKKAVELGANAINYTKAEHFLYDDNKQVVGVTVTDRLSG
                     KAYDIKGHRVINAAGPWVDKVRKLDYATNNKHLRLTKGIHLVIDKQKFPMEQAVYFDT
                     PDGRMVFAIPRDKKVYVGTTDTVYDEAVINPKALESDHNYVIKAINYMFPDVHITEKD
                     IESSWAGVRPLIYEEGKDPSEISRKDEVWFSESGLITMAGGKLTGYRKMAEKLLDDVS
                     KTLAKETGKKYKTVQTKHLPISGGDIGGSEQLEAFLSKKAKEGNNRFGWTLEEGREMA
                     KRFGSNIDQLFTYAQEHKEQNETTLPNSLYAELRYSIQHEAVTTPIDFLLRRTGYLLF
                     DMPYLLEWKDAVVDEMAKQFHWSDDVKQTYIEELNIQINDAREPADWHDR"
     gene            complement(13541..14239)
                     /locus_tag="U0308_001945"
     CDS             complement(13541..14239)
                     /locus_tag="U0308_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEM2316906.1"
                     /translation="MTEIFAHRGSSGTHPENTLPAMKAAILSGADGIELDIHVLKSGE
                     LIVMHDERVDRTTNGSGFLKDYTLSEVKKLVIGKRLFRKIRVPTLEEIFKLVSGTDMI
                     LNIELKTDVFEYEGIEQKVLALADKFPEVKRMYSSFNPDTLIRLRDLDPTARLALITH
                     ENLDEVLPLHEKIQLDAVHPPVKAMKNPILKQIAARYWTVNKEETITHFIDANVKGMM
                     TDFPEKAVALRNNK"
BASE COUNT         4257 a         2990 c         2351 g         4741 t
ORIGIN      
        1 taaaagctgc aaacaacctc gtaattatac cattaatggt actacggcgc aatctaaaaa
       61 aagcataaaa aaacagaccg ctctagaaaa attagcaacg gtctgattgt ttaattaaag
      121 tgattttact gtattaacta cgttttcaac agtaaagccg taattcttaa taactgtttc
      181 acctggagca gaagcaccaa atttgtcaat tccgataact ttaccatcta aaccaacata
      241 acgttcccat ccaaagctag cgcccatctc tactgctaca cgttttctaa cagcattcgg
      301 taatacactt tctttgtact cagcagattg ttgctcgaat agatcaaatg atggcacact
      361 gacaactgat acatctgttc cttgagcttg aagttctttt tgcgcttcaa tagctaagtt
      421 aacttcagaa ccactcgcta ggatgattgc ttctggcacg tcacctttag ctggggaaat
      481 aacataagca ccttttttaa cgccttctgc agttaattta gcagaatttg gtagtgttgg
      541 taggccttga cgagtaagaa caagtacatg cggtgtagat gtagaagtga tagcaagttt
      601 ccaagcctcc acaacttcat ttccatcagc aggacgaata acagaaagcc ctggcattgc
      661 acgtaagctt gcaagttgtt cgattggctc atgtgttggg ccatcttccc caactgcaat
      721 actatcatgc gtcattacat aggttactgg taaatgttga atagctgata aacgaatagc
      781 agcacgtaca tagtcagaga atacgaagaa tgtaccaccg tatacttgta atccgccgtg
      841 aagtgccata ccatttaatg cagcgcccat cgcaaattca cgaacaccaa accaaatgtt
      901 tctttcagct ggagtcgctt ttgtaaattc accgtctgtt ttaattgttg tattattcga
      961 acctgcaagg tcagcagatc cgccaaaaat agttgggatt tttccagcta acgcattgat
     1021 aacttctcca ctggaagcac ggctagcaag tgcttttgaa tcatcatata ctggaagatc
     1081 ctcatcccaa tcagctggta acttgttgtt caagctatct tctaattgtt tcgcaagctc
     1141 tggatattct gctttatagg aagcaaataa ctcattccaa gctgtttctg ctttttcacc
     1201 acgttcgcca attgtttctt taaagcgagc agtaacttct tcaggaacaa agaatttctc
     1261 ttcgtagttc caaccataag cttttttcgc ttctaaaata ccttcatcgc ctagtggagc
     1321 accgtgaact ttacttgtac cggcatttgg agcaccaaaa ccgataacag ttttcacttc
     1381 aatcatagta ggttgagaag tgttttgttt cgctttttcg attgctgcta aaatttcagc
     1441 tgtatcatta ccgtctttta ctaataaatg ttcccagcca taagcttcaa agcgttgttt
     1501 tacattttca gagaaagatt tgtctaaatc accatcaaga gagatatcat tggaatcata
     1561 gagaacaact aatcttccta attgttgatg acctgcataa gaagccgctt ctgaagcaac
     1621 accttccatt aagtcaccat ctccgcatag tgcataagta taatgatcca ctaccgggaa
     1681 accatcttta ttatatttcg cttctaaatg tctttctgcc atagccatac caacagccat
     1741 cgcaatacct tgaccaagtg gaccagtagt tgcgtctaca ccatctgtat aacgatattc
     1801 tgggtgacca ggagttttac tttcccattg acggaaattt ttaagatctt ctaattctaa
     1861 tttgaatcca cttaagtgta ataaactata taaaagcatt gagccgtgtc cagcagaaag
     1921 tacaaaacga tctcggttaa accaatgtga attcttaggg ttagtattta atacacgcga
     1981 ccaaagtgcg taggccattg gtgctgctcc cattggtaat cctggatgac cagaatttgc
     2041 tttttgaatt gcgtccattg ataatgtacg aattgtattc actgctaaac tatctgtgtt
     2101 atcgaacaaa tgaaacatcc tctcttcaat ataattttaa ctacttttaa taataagcct
     2161 aaaaagcaat taacacaact aataattgct ttaaattgct taattgattg gtatttttgt
     2221 tcatttgctc attaatgttt atttggtact aattattagt gcttattttt tctaagttgt
     2281 ttcactttat gcggcgttac atcttttcca tttgggtcga ttatcgttgt attttctatt
     2341 gtccccttca tatgcgtacg aaaagacttg atgtattctt ttcttaaatt atcttgctcc
     2401 actttttctg tagcagttaa tgttccggct tttttctttt tagaaagctc attaatacga
     2461 tctattttag ctttttctag catcgttatt ctccttttct tctatagaat aaaaataaga
     2521 aagcagcatg atcgctactt tctaatatta tatcataaac ggccactaaa tcgaccttac
     2581 tggtttgcta gttgaatcgt actatcactc tttattaatt ttgttttgtg tacaggaata
     2641 actactgaat ctcctgcttc cacatgaccg tcagctaaat tattttcttt ttctacccag
     2701 ctaacaaaat ctgcttttgc catatcactt ttccctgcat attgatctgc taatgcccat
     2761 aaagaatccc cttcacttac gttcacttct gaatagtcgt ttcccccgcc aactacagta
     2821 cacattaaaa tgattcctag tatgatgcaa gtaagtacaa atataataga aacataaaat
     2881 ttatcccaaa ttaatttcat agtcattaat aatccctcca aaaagaatgt atgttcgctt
     2941 ttctatatta tagaacagcc gttcgtatat gtcaataaaa aaacgaacct ttgtttgcat
     3001 attggttttt cttttgctat acttgaatta taaaataacc attaaatcaa tgaggtgaaa
     3061 ccatgaaaat atctaaacgc caacaagata tatatgaatt tataaaatca gaagtaaaag
     3121 aaaaaggtta tccaccttcc gtccgcgaaa ttggtgaagc agttggcctt gcttccagct
     3181 ctactgttca tggacatctt gctcgccttg aaggtaaagg cttaattaga cgggacccaa
     3241 caaagcctcg tgcgattgaa atattatctt tagaagacga agcagagaca cccaatgttg
     3301 taaatattcc tattatcggg aaagtaactg ctggaatgcc catcactgca attgagaaca
     3361 ttgatgaata tttcccacta ccagaataca tggcagctgg cgaaaccaat gtcttcatgt
     3421 tagaaatcga cggcgaaagt atgattaatg ccggaatcct tgatggtgac aaagtaatcg
     3481 ttagacaaca aagttctgca atcaatggcg aaatcgttgt agcgatgaca gatgaaaatg
     3541 aagctacatg taaacgattc tacaaagaag ctaatcattt tagattacaa cccgaaaacg
     3601 atgctttgga acctatcctt ttaaacaacg taacgattct aggaaaagta atcggacttt
     3661 atcgagatat tcgctaattt tattcgtttg aacaggtggt tgagaacatg atttattttg
     3721 aaactgaacg gcttattgca agagattatt tagcaagcga ttatcttcct tttagtcaaa
     3781 tgaatgcaga tgagcaagta atgaaatact tcccagccag attaactcaa aacgaaagta
     3841 atgcatttct tgataggatt caagaagaat taaagtcact tggatatggt ctctttgcta
     3901 ttgaagttaa atcgactggc gaattcatcg gttttactgg atttcatgag gctacttttg
     3961 aagctacatt cactccatgc acggagatag gttggcgatt aaaacatagc gcttggaacc
     4021 aaggctatgc caccgaagcc gcacttggcg cgttagcatt tgctgaagaa atcaacacta
     4081 ttaacgaaat atacagtttt accgccgcac tcaataaacc ttcagaaaat gtcatgaaaa
     4141 aaatccattt aacaaaaata gctacttttg aacatcccgc tttagtaaat ggcgatccac
     4201 taaagcccca tgttctttat aagaaggcat aataaaaccc cctgtacatt ctggtacagg
     4261 gggttttaat tccaaataag cagtgaaaaa tatagtccga cgagcgttat gaataaaact
     4321 ggaatagtaa tcacaatgcc aattttgaaa taagagcccc agcttatctt tatccctttc
     4381 tgcgctagaa catgtagcca aagtaaagtt gctagcgagc caattggtgt tattttcgga
     4441 cctaaatcag aaccaatgac atttgcatag actaacgctt ctttcatcac gcctgtaaat
     4501 gacgtatgat cgattgcaag tgcatttatc attactgttg gcaaattatt catgacagaa
     4561 gacagtattg cagcaataaa tcccattcca actgttcccg caaataaacc aaagtgcgca
     4621 acatatgtaa ttgcttctga taataatttt gtgataccga cattttgcaa accatataca
     4681 actacataca taccaaccga gaaaaacaca atattccaag gtgctccttt taaaatagct
     4741 tttgtcgaga ccgcatgact ttttgcactg actaacaaaa agataacagc aactagcaag
     4801 gcaataaatg acactggaat atctaaaaaa ctactcaaaa aatagcctgc tacaaggatg
     4861 ataagtattc cccaagaaac acgaaacatc tttttatctt taattgcaga agctggctct
     4921 cgaatcactc gcatatcata ttttttaggt aatgctttcc gaaaataaaa atataagatt
     4981 aaaatactcg caactaaaga gaaaagcgtt ggaatccaca taataagcgc atactgcgaa
     5041 aaactaatac cgaaaaaatc agccgaaact atattgacta aattactaac tacgagcggc
     5101 aaggacgtcg tatctgctat aaaaccgcta gcaataataa atggaaatac ctttttctca
     5161 tcaaaattca gcgctcgcac catcgctaga acaattggtg tcaaaattag cgccgccccg
     5221 tcattagcaa acaacgcagc aacgaaagct cccaaaatag aaataagaat aaacattaat
     5281 aacccattac ctcttgctaa tcgcgccata tgtaaagccg cccactcaaa aaagccaatt
     5341 ttatctaaaa tcaatgaaat aattataata gcaataaaag cgagcgtcgc attccaaaca
     5401 attccagtaa ctgttgcgac atctgataaa gtgacgacgc caagtaatat ggcaattagc
     5461 gcacctccgc aagctgacca tccgattgat aattttcttg gttgccaaat cacaaaaaat
     5521 aatgtgaagg caaatactaa aatagctaaa gtaatctgca tttcttcccc tttctctaat
     5581 gaaaacctcc ctttcactag cacattttta aatatatgcc tctatttgcc aaacatcaaa
     5641 catttgaaac cgattttcca ataaaaaagc acgtttccat ctataggaaa cgtgcttttg
     5701 actattaata aatttcaaga tattgttcgc gttcccaagg gtgaactgct gtgcggaaca
     5761 tatcacactc aattgttttt gcttcaataa agtgttcgaa aatgtgctca cctaaaccag
     5821 ctttgataat atcgtctttt tcaagttcga ttaaggcgtg gcccaagctt tctggtagat
     5881 cataaatgcc agttgcttca cgttcttctt cgttcatgcc gtaaatgtta cgatcaactg
     5941 gtgccggagg agttaattca tctttaattc cagataaacc agctttaagt agtaccgcca
     6001 ttgctaaata tggattagca gatggatcga cgctacgtaa ttcaagacga gtgcttagtc
     6061 cacgagaact tggaacacga acaagcgggc tacggttttt acctgaccac gcaatgtaac
     6121 atggtgcttc atatcctgga accaatcgtt tgaatgagtt aatggttgga tttgtaacag
     6181 ctgtatagcc acgggcatgt tttaacatcc ctgctaagaa atgataagct gtttggctca
     6241 attctagttc tccgctttca tcgaagaaag catttccttt ttcattaaat agtgacatat
     6301 tgaaatgcat tccagaacca tttacaccaa agagcggctt cggcatgaat gttgcgtgta
     6361 aaccatgttt acgagcaatt gtttttacga ctaatttaaa tgtttggatg ctatcacacg
     6421 ctgtaacggc gtcttcatat ttaaagtcaa tttcgtgttg tcctggtgcc acttcatggt
     6481 gagacgcttc gatttcaaag cccatttctt ctaattcaag cacaatatcg cgacgacagt
     6541 tttcacctaa gtcggttggt gctaaatcga agtaaccacc actatcattt agttcaagtg
     6601 tcggacgacg attttcatct aatttgaata ggaaaaattc tggctcaggt cctaagttga
     6661 actctgtgaa acctagttct tccatttctt taagtacacg ttttaagtta gcacgtgggt
     6721 ctccagcaaa aggagtcatg tcaggattat aaatatcaca aatcattctt gcaacttttc
     6781 ctttttcagc tgtccaaggg aacacaaccc aagtgtctaa gtctgggaat aaatacatat
     6841 cagactcttc aattcgtaca aagccttcaa tggaggaacc atcaaacatg attttgttat
     6901 ctagtgcttt ctttagttgg ctaacaggaa tttccacatt cttaattatc ccgagaatat
     6961 ccgtgaactg taaacgaata aattttacat tttgttcatc tgcgaagcgg aaaatgtctt
     7021 cttttgtata ttttgccata atctaaattc ctcctaaata atctaattat attaacttct
     7081 aaataaagta aatacctctt cttgtctttt taaaaccttg gtaattgttg tttccctgtc
     7141 gcatcttgct ttacaaagcg accagcttgt tgcatttctt ttctaagtat tttgcgcaca
     7201 tcatcgtctg tcaaaggttc tttagattct ttttgctgca tttgatacat tttcttaatt
     7261 cccgcaatat tcagaccatc attcaaataa tcttttatct ctagcaaaac atcaatgtct
     7321 tgaagtgaat acaaacggtg atttccttga tttcgtgccg gatggattaa tccttggtct
     7381 tcatagtagc gaatttgtct agcggtgaga tcagttagct tcatcacagg cccaattgga
     7441 aacagcggca tcgatctccg gatttccttt tcactcacga caattccccc tcaaaacata
     7501 attatttttt gatgatagta gcattataat gtacgtcaga tgttttgtca aatttatgta
     7561 agatattcta acattatcgt taaagcgttg tataccaatg tattccgcat aaaaaaaccg
     7621 cgattaaaac catcgcggta aaaattaaaa atattttttt gcaaataaat gttacttttt
     7681 tatactattt tttggattgc tcgagtaact gcaattttga tgtgttcata ggtcaaaccg
     7741 ccttgaacat agagttgata aggttctcta ataggtccat ctgctgttag ttccaaactc
     7801 gcgccttgta taaatgtccc agctgccatt atcacgtcat cttcataacc tggcatatat
     7861 gcaccgattg gcaaaacatg cgcattaacc ggcgaggctg cttgaatagc ttgcgcaaat
     7921 gcaaccatct tctctttgtt atggaaggaa acgctttgaa ttaaatcagt tcttggcgca
     7981 tcccaaactg ggtcagcttc tacaccaaac tccgcaagca tggcggctgt gaatcgtgct
     8041 cctttaattg cctgagctgt cacatgagga gctaaaaaga aaccttgata catttctaat
     8101 aaactataga gtgatgcacc tgcttctctg ccaattccag gtgtagttaa gcgataacca
     8161 cataaatcta ctaatgcttc ttttcctgca atataaccgc ctgttttcgc taagccacca
     8221 ccaggatttt tgattaatga acccgcgata atatctgctc caacttctgg cggctcctga
     8281 tattccacga attctccgta acagttatct acaaaaacaa ttacttccgg attgatattt
     8341 tttacaaata caatcatttc tttaatcttt tctattgtaa aagaaggtct atccgcataa
     8401 cctcgtgaac gctgaattcc aatcatcttt gtttttggcg tcattttttt cgctattctt
     8461 ggaaagtcta catcaccatt ttccagaagc ggcacagagc tataaccaat atgaaaatct
     8521 tttaaagagc cctgtccttg ctttcgtatt cctacaattt cttctaacgt atcatagggt
     8581 tgaccagtaa tataaagtaa ttcatcatcc gggcgaagga tgccaaataa tacggttgaa
     8641 attgcatggg ttcctgaaat tatttgtgga cgaaccaggg ccgcctctgt cttaaataca
     8701 gtcgcataca cacgttctaa tgtatctcta ccttcatcat cataaccata cccagtggaa
     8761 ggatgaaaat gaaaatcact cactttattc tcttgaaacg catctaaaac tttcgcttga
     8821 ttaaattcag caatttcgtc tgttttattt tgcaaatcat caatttgtgt ttccaccttt
     8881 tttcgtatcg cttgaatatt attcattatt tagctccttt ctcggtttgt acccctctat
     8941 gtggtaactc tgtttacttt caatatattc tagtttcgtt acccacgctt gttgctttat
     9001 ttgcgctaat tcttttcctt tttcttctga aagttctagt gtaaagaaag cccaattttt
     9061 ttcaattaat tggatcattc gctgtttaat cgtatctgga gcctcttgat ctaaagctga
     9121 tataagcaaa ttttctggtt gatcgggtac aaacgtggct ggtgcatgat ccattttatt
     9181 gtaaatgact agtgtcggca gatggttcat ttcaagttcc tctaataaag aaattaccgt
     9241 tgtttcgtgt tgcaaatagt ctggatttga tgcatcaact acatgaatta acacatctac
     9301 attggcagtt tcctctaaag tagagcgaaa agctgcaatt aaagtcgttg gcaaatcttg
     9361 aataaaacca actgtatctg tcaaaagcgc ttgaaatcca cccgaaaagc gaatttttcg
     9421 tgtggttggg tcaagtgttg caaataattt atcttcttgt aatgttgttt cattcgttag
     9481 acggttgaaa atagttgatt tccctgcatt tgtgtaacca attaaaccaa accgaaaaac
     9541 ggattgtata tttcttcgtt caatgattcg cttgcggtgt tgttcaacat gtgttaattg
     9601 cgctttgata tcatgcattt tttcgcgaat atggcgtttg tccatttcta gtttggattc
     9661 accaggccct cttgaaccaa tacctcctcc aagttttgat aaggaaacac cttgtccgct
     9721 aagtcttggt aacagatatt tatattgcgc gtatgcgact tgcagttttc cttctttgga
     9781 ttttgcgcgc atggcaaata tgtctaagat taactgtgtt cggtcaatta ttcgcgcatc
     9841 aaccgcctta gaaatattgc gcacttgagt tgcactaagt tcactattaa atataacaac
     9901 gtccgcctca tgcatttcca ctaaagtagc aagctcttcc agtttaccgg aaccaatgaa
     9961 cgatgcttga tttactcgtt ctaatttttg aattaattca tctactactt caccgtttgc
    10021 cgttttagct aagctatgta gttcattcat ggaattccag aaagcttctt ctgttttatt
    10081 tggcaaaatc acgcctacaa gtattatttt ttctctttcc acatgcattt ctcccttttt
    10141 cagacaagac taatcgtagc atattttctg cataaaaaaa agacatgaaa catcgcaaaa
    10201 aaagcgagtt ccctgccttt caagtaaagt acttattccg catcaggatt taaagcgaca
    10261 ttcttctgcg gggagaaagt tgaaattgcg tgtttaaata caagctgttg ttttccttcg
    10321 acatctagta gtacggtaaa attgtcaaaa cttacaacac gtcctcttaa ctgaaaacca
    10381 tttgttaaaa atacagttgc aagaattttt tccttacgca attgatttaa gtaatagtcc
    10441 tgtaaccctt gtccaccttg tttcataatt tccctctcca atctctatct tatactaaaa
    10501 atttcccaaa ccccaatgaa gttccattgt gcaattggtt ggctaatttc aaataccctt
    10561 tatttcttct taccaaacag aaaagcgtta tttagctgtt aaaaaggttg ttgctttatt
    10621 taatgcttct gattctgtac tgctaacacc cgcctgaatc cagtcaatat ccattctatt
    10681 tctaaaccag gttaactgtc ttttcgcgaa atgccttgag ttcttttgaa ttaattcttt
    10741 tgcttcttct agtgagctct ttccttcaaa ataaggaaat aattctttgt agccgatgcc
    10801 gcgaactgct ggaacatcca ctaaatgttg ctcatataat ttttttgctt ctgtcactaa
    10861 accttcttca aacattaaat tcactcgctg attaattctt tcgtaaagta acgctctgtc
    10921 caaatcaagt cctagaaaga gtggttggta tctatcatta agtacattat tcacttgata
    10981 ctctgagaaa ggctttcctg ttagatgcat cacttctaat gctctaatca ctcggcgctt
    11041 attgttttcg tgtatctgtg ctgcgctttc tggatctttt tgttcgagca tttgccacaa
    11101 tacagttttg tctagttgtt ctaattccgc tcgataagcc ttatcttcgc ttacgttacc
    11161 aaaatcataa tcatagaaaa cagattgaat ataaagtcct gttccaccaa caataattgg
    11221 tagcctacca gcttgatgta ttgtttctat acattttctt gtttctattt ggaatttcgc
    11281 tgcagtgaat ggttcggaag gattcgtcac atcaataaga taatgtttga ttccatccat
    11341 ttcttctggt gtgatttttg ctgtaccgat atctaatcca cgataaactt gcatagagtc
    11401 accactgatg atttctccgt ccaatttttt cgctagttca atacttaaac ttgtctttcc
    11461 gacagcggtt gggccaacga tgacgatgac aggaatcttg ctcaaaaaaa aacctccttt
    11521 tcacctgtaa tcaatgtacc atgaaaaagg tttcttgaaa atagtgaaaa tgattttttc
    11581 cagaaaaaaa gcgcaaatcc ttgaaagatt tacgctcttt tcgaatttta attatctatc
    11641 gtgccaatca gctggttctc tagcatcatt aatttgaata tttaattcct cgatataggt
    11701 ttgttttaca tcgtcgctcc agtggaattg tttagccatt tcatccacaa cagcgtcttt
    11761 ccattcaagt aagtatggca tatcgaaaag caagtagcca gtgcgacgta ataagaaatc
    11821 gattggcgtt gtcactgctt cgtgttgaat cgagtagcgt agttcagcat acaaactgtt
    11881 tggtaaagtg gtttcgtttt gttctttatg ttcctgtgca taagtaaata attgatcgat
    11941 attactaccg aaacgtttag ccatctcacg accttcttct aaagtccagc cgaaacgatt
    12001 attaccttct ttcgcttttt tagataggaa agcttctaat tgttctgagc caccaatgtc
    12061 accaccagaa attggtaaat gttttgtttg aactgttttg tactttttac cagtttcttt
    12121 cgctaatgtt tttgaaacgt catctaataa tttttcggcc atttttctgt aaccagtgag
    12181 tttaccacct gccatcgtga ttaagccact ttcagaaaac caaacttcat ctttacgtga
    12241 aatttcagat ggatcttttc cttcttcata gataagtgga cgaaccccag cccaacttga
    12301 ttcaatatct ttttcggtaa tatgcacatc agggaacata taattaatcg ccttaatcac
    12361 ataattatga tcagattcaa gtgcttttgg attaattact gcttcgtcgt acactgtatc
    12421 cgtcgttcca acatacactt ttttatcgcg cggaatagca aagaccatcc ggccatcagg
    12481 tgtatcaaag tataccgctt gttccatcgg gaatttttgt ttatcaataa ccaaatgaat
    12541 tccttttgtt aagcgtaaat gtttgttgtt tgttgcataa tctaattttc ttactttatc
    12601 tacccaagga ccagcagcat taataacacg atgtccttta atatcgtatg ctttgcccga
    12661 caaacgatct gttacggtta caccaactac ttgtttattg tcatcatata agaaatgctc
    12721 cgcttttgta tagttaatag cattcgctcc gagttctact gcttttttca taacttctat
    12781 tgttaaacgc gcatcatccg tgcggtattc cacgtagtaa ccagaacctt ttaaaccgtc
    12841 ttttttcacg aatggatttt tggctaatgt ttcttttgcg cttaaaattt tacgtcgttc
    12901 atttttcttt acccctgcta aatagtcata taaacgaata ccaaatgaag cggtagtttt
    12961 acccatattg ccgcctttat ggaatgggag catcatccat tcaggagtcg ttacgtgtgg
    13021 tccattttcg tagactatcg cacgttcttt tcctaaatct gctacttctt taatttcaaa
    13081 ttgttgtaaa tatcttaatc caccgtggac taattttgtt gaacggctcg atgttccgct
    13141 cgcgaaatca cccatttcaa caagtgcgac actcatacct cgtgaagtgg catctaaagc
    13201 gattcctgcc cctgtaatcc cgccaccgac gatgactaaa tcaaattttt cctcttgaag
    13261 atttctttcg attgtttctc tgtcaaacgc tgaaaataat tgtaccattt tgtttgcccc
    13321 cttcaaattg tttaccgtct gaattatgcc ttcttggtta cttttccact tttcaatcta
    13381 actgaaacgc tttaagttta aaaacaaaaa aagagactgc aaagtaagac gattgcgctc
    13441 gccttttgca gtctctccga atctcagaca ataatattta ttaacttact atgattatat
    13501 cttttaacga tttataatga aagcgttttg ctcatggagg ttatttatta tttcttagtg
    13561 ccactgcctt ttcaggaaaa tcagtcatca ttcctttaac attggcatct ataaaatgcg
    13621 tgatagtttc ctccttattc accgtccaat agcgtgctgc gatttgcttt aaaatcgggt
    13681 ttttcattgc ttttactggt ggatgcactg catcaagctg aattttttca tgtaatggca
    13741 atacttcatc taagttttca tgtgtaatta aagctagtct ggcagtagga tctaaatctc
    13801 tcagccgaat gagagtatct gggttaaagg aagaatacat tcgtttgact tcgggaaatt
    13861 tatccgctaa tgctaaaact ttttgttcga ttccttcata ttcaaagaca tccgttttca
    13921 actcaatgtt tagtatcata tctgtgccac tcaccaactt aaaaatttct tccaaagttg
    13981 gcacacggat tttacggaaa agccgtttac caatcactaa ttttttcact tctgaaagtg
    14041 tgtaatcttt taaaaagcca gacccatttg tagtcctatc gacgcgttca tcgtgcatga
    14101 cgattaattc gccacttttc aaaacatgaa tgtctaactc gataccatcc gcaccggata
    14161 aaatcgctgc tttcatagct ggtagtgtat tttctggatg cgtcccacta ctgcctcgat
    14221 gggcaaaaat ttccgtcaaa atgcttcccc ccaaactatt tacttatatt tactataaca
    14281 aaaataagca aatatactca aatttttaaa atctatcaat taattcagca ttttaaatt
//
LOCUS       DASDYK010000069        14101 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.069, whole genome shotgun sequence.
ACCESSION   DASDYK010000069 DASDYK010000000
VERSION     DASDYK010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14101
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.069"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            170..1732
                     /gene="rny"
                     /locus_tag="U0308_001946"
     CDS             170..1732
                     /gene="rny"
                     /locus_tag="U0308_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HEM2316907.1"
                     /translation="MTIAITIISSLLFLIVGLVVGSLIFKSSTEKKLAAARGTAELIV
                     EDAKKEAETTKKEALLEAKEENHRLRTEIENELRGRRTETQKAENRLLQREENLDRKD
                     TSLSKREATLERKEESISKRQQQIEEKESKLAEMIQAEQTELERISALSKEEAKSIIL
                     NQVEEELTHDTAIMVKESENRAKEESDKKAKNILSLAIQRCAADHVAETTVSVVTLPN
                     DEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIARIALEKLVQD
                     GRIHPARIEEMVDKARKEVDEHIREVGEQATFEVGIHSIHPDLIKILGRLRYRTSYGQ
                     NVLNHSLEVSKLAGILAGELGEDVTLAKRAGLLHDIGKAIDHEIEGSHVEIGVELATK
                     YKENDVVINSIASHHGDTEATSVIAVLVAAADALSAARPGARSETLENYIRRLEKLEE
                     ISESYDGVEKSYAIQAGREVRIIVEPDTIDDLSSYRLARDIRKRIEEELDYPGHIKVT
                     VIRETRAVEYAK"
     gene            1847..2344
                     /locus_tag="U0308_001947"
     CDS             1847..2344
                     /locus_tag="U0308_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEM2316908.1"
                     /translation="MSEWEILPMIEEHYPGVAAVHQEGIETGNATFQEKTLSIEAFDE
                     KYLNTCRLVVLMNGKVIGWAALLPFSSMHAYRGVAELSIYIAKSARGKGIGKALMHEI
                     IQTSEQNGFWTLQSLIFPENKASIALHHTYGFQTLCVHEKLGEMNGVFRDVALLERRS
                     NRNGE"
     gene            2350..3153
                     /locus_tag="U0308_001948"
     CDS             2350..3153
                     /locus_tag="U0308_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HEM2316909.1"
                     /translation="MKILFIGDVVGSIGRDAITEYLPQLKKKYKPTITVINGENAASG
                     RGITEKIYKDFLELGANAVTLGNHTWDNRDIFEFIDDAKYLVRPANFPDDTTPGTGMV
                     FVKSNQHEIAVINMQGRTFLADLDDPFRKMDTLIEEAKKRTNIIFVDFHAETTSEKEA
                     MGWYLDGRVTAVVGTHTHVQTSDNRILPEGTAYLTDTGMTGPYDAILGMEKEAVIRRF
                     KTALPTRFEVPKTGRAVLSGCLITLDENTGKAQKIDRILINEDHPFSFD"
     gene            3170..3532
                     /locus_tag="U0308_001949"
     CDS             3170..3532
                     /locus_tag="U0308_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RicAFT regulatory complex protein RicA family
                     protein"
                     /protein_id="HEM2316910.1"
                     /translation="MTVSKDEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAK
                     VSKIKLLQKEAVNLEHYQKLEAMKQTENQIDNVRADIDSLPIVTEFRRAQEDANDLLQ
                     SITTEITTKVTTELEKEN"
     gene            3642..6224
                     /gene="mutS"
                     /locus_tag="U0308_001950"
     CDS             3642..6224
                     /gene="mutS"
                     /locus_tag="U0308_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEM2316911.1"
                     /translation="MTEYTPMIKQYLEIKDKYQDAFLFFRLGDFYEMFFEDALNASQI
                     LEITLTGREGGTKEKIPMCGVPYHSASGYIDTLIEKGYKVAICEQVEDPKTTKGMVKR
                     EVVQLISPGTVMDERGLKAKENNYIASLYCYEGKEYGFAYSDLSTGELKSTVIEASED
                     RLINELTTLSTRELIVSSSEKEVLSDVMKEQLGLTFSVHEEDTIPVENEKLVTRHMSL
                     SEKRAIGKLLHYLKETQKRDLGHLQQAVHYETSNYMKMDYYSKRNLELAESIRGKGRQ
                     GTLLWLLDNTQTAMGGRMLKQWIDRPLIDRKKIIDRQNDVSELMAHFFERLELVENLK
                     NVYDLERLAGRVAYGNVNARDLIQLRNSLYQIPRIRATLLSMSSESLTELANQLDPCE
                     ELTEKLEEAIMDSAPISIREGGIIKDGYNSQLDTYRDASRNGKTWIAELERKERELTG
                     IKTMKVGFNRVFGYYIEVTRANTHLLPEGRYERKQTLTNAERYITPELKEKEKLILDA
                     EEKSMELEYQLFSEVREMVKDYIERLQKLAKSVSEIDCLQSFADISEKNHFIRPTLSE
                     DGSLHVKQGRHPVVEKVMGAQSYVANDCDLDENREILLITGPNMSGKSTYMRQVALTA
                     ICAQVGCFVPAEEAILPIFDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHATKDSL
                     ILFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKELSGLQNIHV
                     SAVEENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLENDDKKIII
                     ASVKQPEEVHEEVQLSMFPVEPEKKVSSKETKLLKEIASMNIMQMTPMDAMNKLYELQ
                     SKIH"
     gene            6244..8055
                     /gene="mutL"
                     /locus_tag="U0308_001951"
     CDS             6244..8055
                     /gene="mutL"
                     /locus_tag="U0308_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEM2316912.1"
                     /translation="MAKHIVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVI
                     DILVEEAGLNKITIIDNGSGIEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALP
                     SIASVSHLEMETSTGEAKGTTISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKY
                     LKSLPTELGNITDILNRLALAHPDISFRFSHNGKPLLQTNGNGDLRQVIAAIYGVSIA
                     KKSVPVKAESLDFKISGYAVLPEVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLL
                     PIGRFPIIVLQIEMDPIIVDVNVHPAKLEVRLSKEKELGQLISQMIKETFHKLQLIPD
                     GEISKKQKEDQKSEQIQMSFEENKPVKETPTLFSKPTIPEYVPSDEDAPREDDFILET
                     MPSYEPESQAEQEEHTKERIPKMYPIGQMHATYIFAQNENGLYIIDQHAAQERIKYEF
                     YREKIGEVSRELQELLVPIVLEFPADEYVRLEEQKAKLEEVGVFLENFGQNSFIIRAH
                     PTWFPKDQEEEMLREIIDEALSAPSISIHKLREDTAIMMSCKKSIKANHYLTTQDMEA
                     LLDTLREASDPFTCPHGRPVIIQYSTYELEKMFKRVM"
     gene            8072..8620
                     /locus_tag="U0308_001952"
     CDS             8072..8620
                     /locus_tag="U0308_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HEM2316913.1"
                     /translation="MELPFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKAL
                     VKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLA
                     IQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETS
                     EQVNQVIASGAIAVTTSNKHLW"
     gene            9046..11277
                     /gene="pflB"
                     /locus_tag="U0308_001953"
     CDS             9046..11277
                     /gene="pflB"
                     /locus_tag="U0308_001953"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HEM2316914.1"
                     /translation="MTEQWYEFAGGNWQQEVDVRDFILKNYRLYDGDDTFLVGPTEAT
                     TKLWDQVMDLTKKERENGGVLDMDTKIVSTITSHDPGYLNKDLEKVVGVQTDVPFKRA
                     LQPFGGIRMAEVAAESYGFKVDEEISHIFSEYRKTHNQGVFDAYTAEMRAARKSGVIT
                     GLPDAYGRGRIIGDYRRVALYGVDFLIKQKKQDLNNTGLRTMSDDVIRQREELNEQIR
                     ALGELKVLGEKHGFDLGRPAKTAQEAFQWLYLGYLAAIKEQNGAAMSLGRTSTFLDIY
                     VERDLRNGLITEEEAQEIVDHFIMKLRLVKFARTPDYNELFSGDPTWVTESIGGITEE
                     GVPLVTKNSFRFLHTLDNLGPAPEPNLTVLWSTHLPSGFKKFCAKMSIKTSAIQYEND
                     DVMRPKWGDDYAIACCVSAMRVGKQMQFFGARANLAKTLLYAINGGIDEKSKAQVGPA
                     YRPVEGDVLDYKEVMEKYDAMMEWIAELYLNTLNVIHYMHDKYAYERIEMALHDTEVL
                     RTMATGIAGLSVAADSLSAIKYATVRPIRDEDGIVVDYEIEGDYPKYGNNDDRVDEIA
                     VELLKTFMTKVRKHKTYRDAVHTTSVLTITSNVVYGKKTGNTPDGRRAGEPFAPGANP
                     MHGRDTKGALASLSSVAKLPYEYGQDGISNTFSIVPKALGREDESQINNLVAMLDGYS
                     TKMGHHLNINVFNRDTLLDAMDHPEEYPQLTIRVSGYAVNFIKLTREQQLDVIHRTMH
                     ESM"
     gene            11354..12100
                     /gene="pflA"
                     /locus_tag="U0308_001954"
     CDS             11354..12100
                     /gene="pflA"
                     /locus_tag="U0308_001954"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase-activating protein"
                     /protein_id="HEM2316915.1"
                     /translation="MTEVLGRVHSVETMGTVDGPGIRFIVFMQGCLLRCQFCHNPDTW
                     KIGTGTERSAQDVFDEAIKYKEFWDASGGGVTVSGGEPLLQVDFLIEFFTLCKAAGVH
                     TTIDSCGGCFTRDPEFIEKLDRLMEVTDLILLDIKQINPEKHLKLTTKSNAPIIDFAH
                     YLRDKEQPIWIRHVLIPTKTDDPEDLTKLHEFIQTLPNVKQVDVLPYHTMGVYKWKEM
                     GIRYPLEGIEAPEEEVVALANKILETSSYK"
     gene            complement(12134..12664)
                     /locus_tag="U0308_001955"
     CDS             complement(12134..12664)
                     /locus_tag="U0308_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2316916.1"
                     /translation="MIPNVLEYTLLQMIAREASSGYELANRLRIMQNTHHSQIYPSLS
                     KLEKAGFLVVHKHSQDKKPDKKVYTITQTGLDSLLEWSETPLKIPVTRDEFTTKVQLD
                     WLNNARTKGLIQERESYLKEQLGLIEETLDHFAKLFDLKTKQDKLKNMSYQVYARRLD
                     LIQTELKWCEEMYKIL"
     gene            12831..14024
                     /gene="mdrL"
                     /locus_tag="U0308_001956"
     CDS             12831..14024
                     /gene="mdrL"
                     /locus_tag="U0308_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdrL"
                     /protein_id="HEM2316917.1"
                     /translation="MMTDKEMNTGKWITAAASLLAFMGIGVVDPLLPSIAESIGASHS
                     QVEMLFTAYIFTMAIMMIPIGIVAGKLGDKKLIVIGLFIVTIFALLCGLSDTIGALSI
                     FRAGWGFGNSMFMATAMTMLIALSETPGHAIGIYEASMGLGMAFGPLLGGILGNISWR
                     YPFFATACLIFIAFLLILFKVKEPKKVAPAPTEKNEVAIKQMLHLFKYRPFLQIAFSG
                     MFYYYCFFTILAYSPLILGLSAIQIGFVFFAWGLCLALGSAKISHALEFRFNSKQILK
                     GSLLACAVILALLGFIDNIAVDIGLIVISGLILGINNALFTTTVMEHSPYARSVTSGA
                     YNFVRWLGAAFAPLCSGLLSEALGMKMPFIVASVICLAGMGLLFIKLKPSHFTLQQST
                     SIESE"
BASE COUNT         4771 a         2456 c         2898 g         3976 t
ORIGIN      
        1 tgtatatttt atattgctgg gagacaaggg ggaagttttt tcctttgaaa atcggcttca
       61 actgaatggg gagattagca ctcggttgtt gatgaaaaat acgcatgtgc cagaattctg
      121 gccaccgaca taacaataac gaaaattgaa tagcaaagga ggtgtaagga tgacaatcgc
      181 aatcacgatc atctccagtt tgcttttctt aatcgtcggt ctagttgttg gttctctaat
      241 ttttaaatct agtacagaga aaaaactggc tgctgcaagg gggactgcgg aattaattgt
      301 agaggatgcg aagaaagaag cagaaactac aaaaaaagaa gcattgcttg aagcgaagga
      361 agagaatcat aggttacgta ctgaaatcga aaatgaactt cgtgggcgaa gaacagagac
      421 acagaaagca gaaaatcgct tattgcaaag ggaggaaaac ctcgaccgta aagatacttc
      481 tttaagtaaa cgagaagcta cacttgaaag aaaagaggag agtatcagta aacgtcaaca
      541 acaaattgaa gagaaagaaa gcaaactagc tgagatgatt caagcggagc agacagaact
      601 cgaaagaatt tctgcgctca gcaaagagga agcgaaatct atcatcctta accaggtaga
      661 agaggaatta acacatgata cagcaatcat ggtcaaagaa tcagaaaacc gggccaagga
      721 agagtcggat aaaaaagcaa agaatattct ctcactagct atccagcgtt gtgcagctga
      781 tcatgtggca gaaacaacgg tatctgttgt taccttacca aatgatgaga tgaaaggtcg
      841 gattatcgga cgtgaaggcc gtaatatccg cacgcttgag acgttaacgg ggattgattt
      901 gataattgat gatacaccgg aagcagtaat tctttccgga tttgatccaa ttcgacgtga
      961 aatcgctaga atcgccttag aaaaacttgt tcaagatgga agaatccatc cagctcgaat
     1021 tgaagaaatg gtggacaaag cccgtaaaga ggtggacgaa cacattcgcg aagtcgggga
     1081 acaagcaaca tttgaagttg gaattcattc catccatcct gatttgataa aaattcttgg
     1141 ccgcttgcgt taccgtacta gttacggaca aaacgttctt aaccactcac tcgaagtttc
     1201 aaaacttgca ggaattcttg caggagagct tggcgaagac gttacgcttg ctaaacgggc
     1261 cggactactt catgacatcg ggaaagcaat tgaccatgaa attgaaggca gtcatgttga
     1321 aatcggcgtg gaacttgcta ccaaatacaa agaaaatgat gtggtaatca atagtattgc
     1381 ttcccatcac ggagatacag aagctacttc tgttatcgca gtattggtcg cagcggcaga
     1441 tgcactttct gctgcaagac cgggagctcg tagtgaaacg cttgaaaatt acatccgtcg
     1501 tttagaaaaa ttagaagaaa tttctgagtc ttacgatggt gtagaaaaat cttatgctat
     1561 ccaagcagga cgtgaagtac gtatcatcgt tgaaccagat acaattgatg atctttcttc
     1621 ttaccgcctt gctcgcgaca taagaaaacg aattgaagag gaattagatt atcctggtca
     1681 cattaaagtg actgtcattc gtgaaacaag agcagttgaa tacgctaaat aataattaaa
     1741 agatacatcg caaatttatt ttgcggtgta tcttttttta atcggttgcc taggtcgagt
     1801 aagaacggta taattaatgg ataaacgaaa aagggaggcg gagtttttga gtgagtggga
     1861 aattttgcct atgatagaag agcactatcc gggagtagct gcagtccatc aagagggcat
     1921 tgaaacagga aacgctactt ttcaagagaa gacactatct atagaagcgt ttgatgaaaa
     1981 gtacttaaac acttgtcgat tggttgtcct tatgaacggc aaagtgattg gctgggcagc
     2041 gctgttacca ttttctagca tgcatgctta tcgaggagta gctgaattaa gtatttatat
     2101 agcaaaaagt gcccgtggaa aaggcattgg aaaagcactt atgcatgaaa ttatccagac
     2161 aagcgagcag aatggttttt ggacattgca atctttgatt tttccagaaa ataaagctag
     2221 cattgcgctt catcatacat atggattcca aactttatgc gtccacgaaa aattaggcga
     2281 aatgaatggc gtttttcggg atgttgcact attagaacgt agaagtaata gaaacggaga
     2341 ataaacaaaa tgaaaatact atttatcggt gatgttgtcg gttctatcgg ccgcgatgcc
     2401 ataacagaat atttaccaca attaaagaaa aaatataaac ctactatcac ggtgattaac
     2461 ggtgaaaatg cagcgagcgg gcgtgggatt acagagaaaa tttataaaga ttttctggag
     2521 cttggtgcta atgctgtaac acttgggaac catacatggg ataatcgtga tatttttgaa
     2581 tttatcgatg acgctaagta tttagtgcgc ccagcaaact ttccagatga tactacacct
     2641 ggtacgggaa tggtttttgt gaaaagcaat cagcatgaaa ttgccgttat caacatgcaa
     2701 ggtcggactt ttctagcaga tttagacgat ccattccgca aaatggacac tttgatagaa
     2761 gaagcaaaga aacgcactaa tattattttt gtggattttc atgcagaaac tactagtgaa
     2821 aaagaagcaa tgggttggta tttagatggt cgtgttacgg ctgttgttgg cacgcatact
     2881 catgtgcaaa cttcggataa ccgcattctt ccagaaggaa cagcctatct gacggatact
     2941 ggtatgactg gtccatatga tgctatcctc ggaatggaaa aggaagctgt tatccgtcga
     3001 tttaaaacag ctttaccaac taggttcgaa gttcctaaaa ctggtcgagc agtcttgtcg
     3061 ggctgtttaa tcacacttga cgaaaatact ggaaaagcac aaaaaattga ccgaattctc
     3121 atcaatgaag accacccatt ttcctttgat taagaatgga gatgaaattg tgacagtttc
     3181 aaaagacgaa atcatgaaaa aagctaccga acttcgtgat gcgcttcaac aaacggaaga
     3241 agtatcgttt taccgtcttg ccgaggaaag aatcaatgcg aactccaaag tagcagcgaa
     3301 ggtttctaaa ataaaattac ttcaaaaaga agcagtaaat ttagagcatt atcaaaaact
     3361 tgaagcgatg aaacaaaccg aaaaccaaat tgataacgtt cgcgcagata ttgattcgct
     3421 tccgattgta acagaattca gacgcgctca agaagacgcc aacgatcttt tacaatcgat
     3481 tacaacagaa atcactacaa aagtaactac agagcttgaa aaagaaaatt aaccacttaa
     3541 aactgccaaa acatcggcag ttttttcctt ttgcggtcgc agggaaatga aactttatgc
     3601 tataatgaga ggatgaaaaa gaagtaaggg atgatgagat aatgacagaa tatacaccaa
     3661 tgattaagca gtacttggaa atcaaagaca aatatcaaga tgctttctta tttttccgtt
     3721 taggagattt ttatgaaatg ttttttgagg atgcactgaa cgcttctcaa attttagaaa
     3781 ttacattaac tggtcgtgaa ggtgggacaa aagagaaaat cccaatgtgc ggggttccat
     3841 accattcagc gagcggctat attgatacat taattgaaaa aggctataaa gttgcgatat
     3901 gtgagcaagt cgaggatcct aaaacaacca aaggcatggt aaagcgagaa gtagtgcagt
     3961 taatttcacc aggaaccgtt atggacgaac gcggcttaaa agcaaaagaa aataactata
     4021 tcgcctccct ttattgctat gaaggcaaag agtacggctt tgcttattct gatttatcaa
     4081 caggtgaatt aaaatcaacc gtaattgaag ctagcgaaga tcgtttgatt aatgaactaa
     4141 cgacactttc aacaagagaa ttgattgttt cttcctcgga aaaagaagtg ctttcagatg
     4201 tcatgaagga gcaactaggt ttaacttttt ctgtacacga agaagatacg attcctgtcg
     4261 aaaacgagaa attagtaacc cgccacatgt cattatccga aaaacgtgcc attggtaagt
     4321 tactccatta tttaaaagaa acgcaaaagc gggatttagg gcatttacaa caagctgtcc
     4381 attacgaaac gagcaattat atgaagatgg actactattc caaacgtaat ttagaattag
     4441 cagagtcgat tcgtggtaaa ggtcgtcaag gtacgttact ttggcttcta gataataccc
     4501 aaactgctat gggcggaaga atgctcaaac aatggattga tcgtccgtta atagatcgaa
     4561 aaaaaatcat tgatcgacaa aatgatgtta gcgaattaat ggcacacttt ttcgaacgcc
     4621 tagagttagt agaaaacttg aaaaacgtct acgatttaga acgccttgct ggtcgagttg
     4681 catacggcaa tgtgaatgca cgagacttaa ttcaattgcg taattcgtta tatcagatcc
     4741 ctcgtattcg cgcgacactg ttgtcaatga gtagcgagag tctcaccgaa cttgccaacc
     4801 aattagatcc atgtgaagaa ctaaccgaaa aattagaaga agcaatcatg gattctgcac
     4861 cgatttccat tcgggaaggc gggattatta aagatggtta taatagccag ttagatacgt
     4921 accgcgatgc aagccgcaat ggaaaaacgt ggattgcaga attagaacgt aaagaacgtg
     4981 aactaacggg tattaaaacg atgaaggtag gatttaatcg agtattcggc tattatattg
     5041 aagttacacg tgcaaacacg catctgctcc cagaaggccg ctatgagcgc aaacagacac
     5101 taacaaatgc cgaacgttat atcacgcctg aactaaaaga aaaagaaaaa ctcattttag
     5161 atgcagaaga aaaaagcatg gaattagagt accaattatt ttctgaagta cgagaaatgg
     5221 taaaagacta catagaacgt ctgcaaaaat tagccaaatc tgttagtgaa atcgattgcc
     5281 tgcaaagttt tgcggatatt agcgagaaaa accatttcat tcgtccgaca ttaagcgaag
     5341 acggttccct gcacgtaaaa caaggtcgtc atcccgttgt agaaaaagta atgggtgccc
     5401 agagctatgt agcaaatgac tgtgatttag atgaaaatcg ggaaatttta cttataactg
     5461 gtcctaatat gtcaggtaaa agcacttata tgcgccaagt agccttaaca gcaatctgcg
     5521 cgcaagttgg ttgttttgtt cctgcagaag aagcgatatt accaattttt gaccaaattt
     5581 tcacgagaat tggcgcagca gatgatctaa ttgccggtca aagtacattt atggtagaaa
     5641 tgttagaagc tagaaatgcc attgttcacg caacgaaaga tagtttaatt ttatttgatg
     5701 aaattggtcg tggaacagct acttacgacg gaatggcgct tgctcaagca atcattgaat
     5761 atatccatga aaatgtccat gctaaaacac ttttctccac ccattatcat gaattaactg
     5821 atttggagaa agaactgagt gggttacaaa atattcacgt tagtgctgta gaagaaaatg
     5881 gcaaagtagt tttccttcat aaaattaaag aaggcccagc agacaaaagt tatggtattc
     5941 atgtcgctga gctagcagaa ttaccaaaat cacttattga acgagcgagc cgtattttag
     6001 aacaactgga aaatgacgat aagaaaatca ttatcgctag cgtgaagcag ccagaagaag
     6061 ttcacgaaga agtgcaactg tcgatgttcc cagtggagcc agaaaagaaa gtatcttcta
     6121 aagaaacaaa actactaaaa gaaattgcct ccatgaacat tatgcagatg acaccaatgg
     6181 acgcgatgaa taaattatac gaacttcaaa gtaaaatcca ttaaaaagaa aggcgggttt
     6241 taaatggcta aacatattgt cgaattaacc gatgctctat ccaataaaat tgctgccgga
     6301 gaagtagtag aacgccctgc ttcagtcgtt aaagaattag tagaaaatgc aattgatgca
     6361 gggagcaccg tcatagatat tttagtggaa gaagcgggat taaataaaat taccattatt
     6421 gataacggta gtggcattga agaagaagat gtcgcaacag cttttttacg tcacgccaca
     6481 agcaaaatca aaaacgaagc agatttattc cgtgtgcata cactaggatt ccgcggtgag
     6541 gcacttccaa gtattgcctc tgtgtcccat ttagagatgg aaacttccac tggcgaagca
     6601 aaaggaacga ccatttcttt agaaggcggg aaaataatcg aacaaaaaag cggacatgct
     6661 agaaaaggaa cacaaatcga agtatcccag ttgttcttta atacgccagc acgcctaaaa
     6721 tatttgaaaa gtttaccaac cgagcttggt aacataaccg atattctaaa tcgcttagct
     6781 ttggcgcatc cagatatcag tttccgcttt tcacacaacg ggaaaccttt attacaaacc
     6841 aatgggaatg gggatttacg ccaagtaatt gcagcaattt acggtgtttc aattgcgaaa
     6901 aaatcagtac cagttaaagc agagtcactt gattttaaaa tttctggata tgctgtatta
     6961 ccagaagtga atcgctctaa ccgtaattat atttcgacca tcattaacgg tcgttttatt
     7021 aaaaatttcg cattagtaaa agctattcaa gaaggatatc acacgctctt accaattgga
     7081 cgtttcccga ttatcgttct ccaaatcgag atggacccaa ttattgtaga tgtaaacgtt
     7141 catcctgcta aattagaagt ccgcttaagt aaagaaaaag aattaggaca actaattagt
     7201 caaatgatta aagagacttt ccacaaattg caactaattc cagatggaga gatttctaaa
     7261 aaacaaaaag aagaccaaaa atcggaacaa atccaaatgt cttttgaaga aaataaaccc
     7321 gtaaaagaaa caccaactct tttttcaaaa ccaactatcc cggaatatgt cccttcagat
     7381 gaggatgctc cacgagaaga tgattttatt ttggaaacaa tgccgtccta tgaaccagaa
     7441 tctcaagcgg agcaagaaga gcatacgaaa gaacgtattc ctaaaatgta tccaattggt
     7501 caaatgcatg caacttatat ttttgcgcaa aatgaaaatg gcttatatat cattgatcaa
     7561 catgcagcac aggaacggat taaatacgaa ttttatcgtg agaaaattgg agaagttagt
     7621 cgcgagttgc aagaattact tgttcctatt gtgcttgaat ttccagcgga tgagtatgtt
     7681 cgtttagaag aacaaaaagc taaattagaa gaggtcggcg ttttcctaga gaacttcggg
     7741 caaaatagtt ttatcattcg tgcgcatcca acttggttcc cgaaagacca agaagaggag
     7801 atgcttcggg aaattattga tgaagcgtta tccgctccaa gcataagtat tcataaatta
     7861 agggaagaca cagctattat gatgagttgt aaaaaatcaa ttaaagcaaa tcactattta
     7921 acaacgcaag acatggaagc attactcgat acactgagag aagcaagcga tccattcact
     7981 tgtcctcatg gacgtccggt gattatccaa tactcaacat atgaactaga aaaaatgttt
     8041 aaacgtgtga tgtaaaagag gaggaaataa tttggagtta ccattttcca atcaatcaat
     8101 catcccagct gcacataatc aaaaagatat ggaaaaaatt ttagagcttg atttgacata
     8161 tatggtgatg ctggaaacac atgtggctca attaaaagca ttagtcaaat acgcacaagc
     8221 cggcgggaaa aaagttttat tacatgccga tttagtcaat ggactgaaaa atgacgacta
     8281 cgcaatagac tttttatgta cagaaatttg tcctgatggt attatttcga ctagaggaaa
     8341 tgccattatg aaagctaaac agcacaaaat gctagccata caacgtcttt tcatgattga
     8401 ttcaagcgcc tataacaaag gtgtagcatt gatacaaaaa gtccaacctg attgtattga
     8461 acttttacca ggtattattc ctgagcaagt acaaaagatg actcaaaagc ttcatatccc
     8521 tgtaattgca ggaggattaa ttgaaactag tgaacaagtc aatcaagtaa tagctagcgg
     8581 ggccatcgca gttacaacat ccaataaaca tttatggtaa ataaacagct aagtcgtgta
     8641 gcaataacga cttagctgtt cttatgaaaa acaatgaaaa cgctatattt acccgtggaa
     8701 cattgctaga caacgtttta agcggtttct aactgttcta tataaaatag ccacctttaa
     8761 actgtaccat aacaggtaag gggagttgga gtggtacagc aaaaattaat aattaaaata
     8821 aaaacaaaat tagaatcata ataaattagg gaaatggcta tttaaaggta attttaagct
     8881 ttttaagttt aaaagacaca aaaaagtcat aaaaaagttt gaaaaatatt gcacaaaact
     8941 gtagcatttt ccagagaata tgttatgata acagtgtaga ttatttataa attagtttgc
     9001 tcaaaaaagc acgctcgaga atgaacaata aatggaggtt atatgatgac tgaacaatgg
     9061 tatgaattcg caggtggtaa ctggcaacaa gaagtagatg tacgtgactt tatcttaaaa
     9121 aactatcgct tatatgacgg tgacgacaca ttcttagttg gcccaaccga agcaactaca
     9181 aaactttggg atcaagtaat ggacttaact aaaaaagaac gtgaaaacgg tggcgtactg
     9241 gatatggata ccaaaatcgt ttcaaccatc acttcacatg acccaggtta cttaaataaa
     9301 gatttagaaa aagttgtcgg tgttcaaact gacgtacctt tcaaacgcgc tttacaacca
     9361 ttcggcggaa tccgtatggc agaagttgca gctgaatctt atggttttaa agtagacgaa
     9421 gaaattagtc atattttttc tgaataccgt aaaacgcata accaaggtgt atttgatgct
     9481 tatactgctg aaatgcgcgc agctcgtaaa tcaggcgtaa ttactggtct tccagatgct
     9541 tatggccgtg gccgtattat cggtgactac cgtcgtgtag cactttacgg agtagacttc
     9601 ttaattaaac aaaagaaaca agatttaaac aatacaggtt tacgtacaat gagcgatgac
     9661 gttatccgtc aacgtgaaga acttaacgaa caaattcgtg ctcttggcga attaaaagta
     9721 ctaggcgaaa aacatggttt cgatcttggt cgcccagcta aaactgcaca agaagctttc
     9781 caatggttat accttggtta cttagcagca attaaagaac aaaatggtgc tgctatgagc
     9841 ttaggacgta catctacatt ccttgatatt tatgtagaac gtgatcttcg taacggctta
     9901 attactgaag aagaagcgca agaaatcgtt gaccacttca tcatgaaatt acgccttgta
     9961 aaatttgctc gtacaccaga ttacaatgaa ttattctctg gagatccaac atgggttact
    10021 gaatccatcg gtggtattac agaagaaggc gttccacttg taacgaaaaa ctcattccgt
    10081 ttcttacaca ctttagataa cttaggacct gctccagaac caaacttaac tgtactttgg
    10141 tccactcatt taccatcagg attcaagaaa ttctgtgcta aaatgtctat caaaacatct
    10201 gctattcaat acgaaaatga cgatgttatg cgccctaaat ggggagatga ctatgcaatc
    10261 gcatgttgtg tatctgcaat gcgcgttggt aaacaaatgc aattctttgg tgctcgtgcc
    10321 aaccttgcta aaacacttct ttacgcaatc aatggtggta tcgatgaaaa atctaaagca
    10381 caagttggac ctgcttatcg tccagttgaa ggcgacgtat tagactacaa agaagtaatg
    10441 gaaaaatatg atgcaatgat ggaatggatt gcagaacttt accttaatac attaaatgtt
    10501 attcactata tgcatgataa atacgcttac gaacgtatcg aaatggcttt acatgataca
    10561 gaagtattac gtactatggc aactggtatc gctggacttt ctgttgcagc tgactcctta
    10621 tctgctatta aatatgctac tgttcgtcca attcgtgacg aagatggcat cgtggttgat
    10681 tatgaaatcg aaggcgacta tcctaaatac ggaaataatg atgaccgtgt agacgaaatt
    10741 gctgtagaac ttctaaaaac attcatgact aaagttagaa aacataaaac ttaccgtgat
    10801 gcagttcaca caacttctgt tcttacaatc acttctaacg tggtttatgg taagaaaact
    10861 ggtaacactc cagacggacg tcgtgcagga gaaccatttg caccaggtgc gaacccaatg
    10921 catggccgtg atacaaaagg tgctttagct tctctatctt ctgttgctaa acttccttac
    10981 gaatatggtc aagatggtat ttctaacaca ttctctatcg taccaaaagc tttaggtcgc
    11041 gaagacgaat ctcaaatcaa taacttagtt gcaatgctag atggttattc tacaaaaatg
    11101 ggacatcact taaacatcaa cgtattcaat cgtgatacat tacttgatgc gatggatcat
    11161 ccagaagagt atccgcaatt aactatccgt gtatctggat atgcagttaa cttcatcaaa
    11221 ttaacacgtg aacaacaatt agatgttatt caccgtacaa tgcacgaatc catgtaataa
    11281 ttaggcgaga acgctttggc aaggattgct caccgtagca atccttgtta tttaggaaag
    11341 gaagaggaga attatgacag aggttttagg aagagttcat tcagtagaaa caatgggaac
    11401 agtagacggt ccaggtatcc gctttattgt ttttatgcag gggtgtttac ttcgttgcca
    11461 attttgtcat aatcccgata cttggaaaat tggtactggc acagaacgtt ctgcccaaga
    11521 tgtatttgac gaagcaatta agtataaaga gttttgggat gcatcaggtg gcggcgtgac
    11581 agttagtggc ggtgaaccgt tgcttcaagt agatttccta atcgagtttt tcacgctatg
    11641 taaagcagca ggagtgcaca caactattga ttcttgtggt ggttgtttca cacgtgatcc
    11701 ggagtttatt gagaaattgg atcgtttgat ggaagtaacg gatttaattt tactggatat
    11761 taagcaaatc aacccagaaa agcatttaaa actgacaacg aaatctaatg caccaataat
    11821 cgattttgct cattatttac gtgacaaaga gcaaccaatt tggattagac atgtactaat
    11881 tccaaccaag acagatgatc cagaagattt aacaaagctc cacgaattca ttcaaactct
    11941 tccaaacgta aaacaagtgg atgtgcttcc ataccataca atgggtgttt acaaatggaa
    12001 agaaatgggc attcgttatc cgttagaagg aatcgaggcg ccagaagaag aagtggtagc
    12061 acttgccaat aaaatcttag aaactagtag ttataaatag taaaaaccgg cgaacttagt
    12121 attcgccggt tttttatagt attttataca tttcctcaca ccattttaat tcggtttgaa
    12181 tcaaatctaa tcgtcttgca tagacttgat aagacatgtt ttttagcttg tcttgtttgg
    12241 tttttaggtc aaataattta gcgaaatgat ccagtgtttc ttcaattaaa cctaattgct
    12301 cttttaaata gctttctctt tcttgaataa gccctttggt tctggcattg tttagccagt
    12361 caagctgtac ttttgttgta aattcatctc gtgtgacagg gattttaagt ggtgtttcag
    12421 accattcaag cagggagtct aagccggttt gtgtgatagt atagactttt ttatcaggct
    12481 ttttatcttg ggaatgctta tggacaacta aaaaacctgc tttttctaac ttagataaag
    12541 aaggataaat ttggctatga tgtgtatttt gcataattcg aagcctgttt gcgagttcat
    12601 aaccactaga tgcttcacga gcaatcattt gtaataacgt atattctaag acatttggta
    12661 tcatacaata gcacctctaa atttctattt aatcttattg taagcgataa acactaataa
    12721 gtaaaatggt tatatatgta ataaattata tatgtaaata ttgacattag tatttatcaa
    12781 gcgtaatata ataattgagt tttatttaga aagggaagtg tagttgtatt atgatgacag
    12841 acaaggaaat gaatacgggg aaatggataa cagcagcagc tagtttgctt gcgtttatgg
    12901 gaataggggt tgttgatcca cttttacctt ctattgcaga aagtattggg gcatctcact
    12961 cgcaagtaga aatgttattc accgcttata tttttactat ggcgattatg atgattccga
    13021 ttggtattgt tgccggaaag cttggagata aaaagttaat cgttatcgga ctatttattg
    13081 ttactatttt tgcattatta tgtggtttat ctgatacaat tggtgcttta tctatttttc
    13141 gggctggttg gggttttggt aactctatgt tcatggctac tgcgatgaca atgcttattg
    13201 ctttatcaga gacaccagga catgcaattg ggatttacga agcttccatg ggccttggga
    13261 tggcatttgg accactacta ggaggtattc taggtaatat ttcttggcgc tatccatttt
    13321 ttgcgacagc ttgtctaatt tttatcgcat ttttacttat tttatttaaa gtaaaagaac
    13381 cgaagaaagt cgcaccagca cctacagaga aaaatgaggt tgctatcaag caaatgctcc
    13441 atttattcaa atatcgacca tttttacaaa tcgcttttag tggaatgttt tattattatt
    13501 gtttctttac aattttagct tattcgccac ttattcttgg attatcagca attcaaattg
    13561 gttttgtatt ttttgcttgg ggattatgtt tggcgttggg ttcggcaaaa atttcacatg
    13621 cgttggagtt tcgttttaat agcaaacaaa tcttaaaagg atctttactg gcatgtgctg
    13681 ttatcttagc attacttgga tttattgata atatagctgt agatataggt ttgattgtta
    13741 tttctggctt gattttagga atcaataacg cactatttac aaccactgtt atggaacatt
    13801 caccgtatgc aagaagtgtg actagtggag catataattt tgtgcgttgg ttaggcgctg
    13861 cgtttgcgcc actttgttct gggttactca gcgaagcgct tggtatgaaa atgccattta
    13921 tcgtagcgag cgtcatttgt ttggcaggca tgggattact atttattaaa ctaaaaccat
    13981 cacattttac cttacaacaa tctacttcta tagaaagtga ataaaataat aaagagactg
    14041 agtaatccgg ctcagtcttt ttttatgcta aaagttaatt atttaatgat tatcgttaaa
    14101 a
//
LOCUS       DASDYK010000070        13873 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.070, whole genome shotgun sequence.
ACCESSION   DASDYK010000070 DASDYK010000000
VERSION     DASDYK010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13873)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13873)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13873
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.070"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            240..1484
                     /locus_tag="U0308_001957"
     CDS             240..1484
                     /locus_tag="U0308_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEM2316918.1"
                     /translation="MKKKMFVVLALVLSLSLVLMACGGSKDDANSGDSKVLNVWAMGD
                     EAKSLKELAQKFTKDTGIEVKVQVIPWANAHDKLLTAVASKSGPDVVQMGTTWMPEFV
                     EAGALLDITKDVEKSKNMNSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKK
                     VGYNEAPKTWDELSDAALKLSKRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGQP
                     VFNKKPFVDTVSYLDSFIKNGSAPDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDT
                     APDIDGKWATAVLPKKENNESSLGGANLSIFKYSDKKDDALKFMDYMSQPDVQLSWLK
                     DTNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYR
                     GGADVQTQMDTFNDQVEALLKK"
     gene            1545..2438
                     /locus_tag="U0308_001958"
     CDS             1545..2438
                     /locus_tag="U0308_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2316919.1"
                     /translation="MKQFLNKNTPYLFISPALFLLLLFSLLPILLAFVISFTDIDLVG
                     LADYSKINFVGVDNYVNIMQDPVFLKSIFNTLFYVIIGVPLVIVCSLGIALMINFSQA
                     KIFQFFRLIFYTPSITNVVAVAVVWSYLYNPRFGLLNYLLSFLDLGPVPWLQDPTIAK
                     LSLIILAVWRAIGVNMIIFLAALQGIPREYYEAASLDGANSRQQLFKITVPMLRFAIF
                     FVTVTTMIGWLQFFEEPFVMTEGGPLDSTNSVALFIYQNGFQLSKFGYAAAGSFILFI
                     AIIIITIIQFRIQRKNNDGDI"
     gene            2456..3286
                     /locus_tag="U0308_001959"
     CDS             2456..3286
                     /locus_tag="U0308_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM2316920.1"
                     /translation="MNQYRQKSRGAQIAVITILTVGGFFMILPFIWMVLSSLKTDAEI
                     LKIPPTIWPETFTLDNFTKLFTEMDFAIYLKNTLIIVFFSFFGLFLNAMAGYGFAKFK
                     FKGKNKLFYLVLATMMIPGQVTMIPVYLLLNAAGLTNTMTGIVLPGLVGAFGIFLFRQ
                     FMSTISDDLLEAARLDGASEFYIFWRIVIPISRPVLAVQGILTFIAGWNSFLWPLIIA
                     NDEKFYTLSVGLQLLKGQYGSNYALQMAGATFMVIPIILIFMTFQKYILKGFNVSGMK
                     "
     gene            complement(3331..4800)
                     /locus_tag="U0308_001960"
     CDS             complement(3331..4800)
                     /locus_tag="U0308_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HEM2316921.1"
                     /translation="MGKATGFMEYDRIPSPGRDPKSRTRDWNEYSLPMPVADLTLQAA
                     RCMDCGVPFCSVGMEIKNGVSGCPLHNLIPEWNDAVYRGDWYEALQLLLKTNNFPEFT
                     GRICPAPCEGGCTVAISEPAVGIKSIEKAIIDRGFEEGWIKPAPPKKRTGKRIAVIGS
                     GPAGLACADQLNKAGHSVTVIEKSDRIGGLLMYGIPTMKLEKEQVTRRVNLMAEEGIE
                     FVTGVAAGTDVTFAELREEYDSIVLATGAGNARDIPLAGRDAVGIHFAVPYLSQSTRD
                     NLDNGGVQTLSAKGKNVVIIGGGDTGADCVATALRQGAKSIYQFGIQDKLPELRDGEN
                     PWPQYPRVFKMDYAHEEAEAVYGRDPREYLINTTSFEKDEAGNLIGLHTVEVEENKAE
                     RKYTPVEGSEKYFEVDMVLIAIGFAGTTEDIFTNFGVGKTERHTIDAAKGFYRTSEEG
                     VFACGDARHGQSLVVTAIAEGREAAREVDFYLMGETFLP"
     gene            complement(4815..9407)
                     /gene="gltB"
                     /locus_tag="U0308_001961"
     CDS             complement(4815..9407)
                     /gene="gltB"
                     /locus_tag="U0308_001961"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HEM2316922.1"
                     /translation="MKQTNLPKKHGLYNPENEHDACGIGFVANIKKISSHKIVEQGIH
                     MLCQLKHRGGEVGGDTGDGAGILLEISDSFFRRECSKLGINLPEKYHYAVGMFNFPQN
                     KTERECLMAETEKLIASEGQTFLGWRKLPTDVTKVGAGARKTEPAIYQLFIQKNAKLD
                     EAGFERALYLIRKQIEKFAATSKQITETFYVPSLSTRTVIFKGMLLPEQINQYYLDLA
                     DPAYVSAFALVHSRFSTNTFPSWERAHPYRYLIHNGEINTQRGNVNWMKAREKRAESD
                     LLGEDLAKLLPIIDESGSDSATLDNALEFLVQAGRSLPHAAMMLIPEPWDKNPHMTDP
                     KRAFYEYHSTLMEPWDGPTSISFTNGRVIGTILDRNGLRPARYYETKDHTIIYSSETG
                     VVPVDSSEIIRKETVGAGTMLLIDLEEGRIVTDAELKEELTTEKPYREWLEAEMTEIA
                     DLATADLHYEAMDKSERFKKQRAFGYTQDELNKILIPMVTEKKDPMGAMGYDAPLAVL
                     SQRPQVLFNYFKQLFAQVTNPPIDGIREETVTSAMTLLGDEGNILNPTAQNANRIRLK
                     TPILSRKEFAALEQQTKFAQPTVTLPILFKAEERDGLEARLESLFVEADEKIAAGAEL
                     LILSDDGVNADWIGIPSLLAVSGLHHHLVKAGTRTQVSIVVKTAEARDVHQCALLIGY
                     GADAVFPSLAIDTFDGLIKEGRMKGFTLDEAESRYIEAITDGILKIMSKMGISTVQSY
                     RGAQIFEAIGIGDDVIKHYFPGTASQIGGIPLEVIAQEAWLRHREAYHDVGYQSFTLN
                     TGGEYQWRSNGEYHVYNPLAIHSLQQATRENDRETYNLYSDLMQNQNNAFLRGLLTFT
                     SDRKPIPLDEVEPAEAIFKRFKSGAMSYGSISQEAHEALAIAMNRIGGKSNSGEGGEN
                     PNRFTPDENGDWRRSAIKQIASGRFGVTSHYLVNAEELQIKMAQGAKPGEGGHLPGNK
                     VYPWISKTRGSTTGVGLISPPPHHDIYSIEDLSQLIFDLKNANQNARINVKLVSKTGI
                     GTIAAGVAKGNADVILVSGYEGGTGAAARTSIRHAGVPWEIGLAETHQTLLLNGLRNK
                     VVVETDGKLMTGKDVLVAAMLGAEEFGFATAPLVTLGCVMMRVCHLDTCPVGVATQNP
                     ELRKKFSGSADYVVNFFHFIVAEMREMMAELGFRSLTEIIGHKEFLTTHEKKEAHWKA
                     KYIDFSNMLYSDDFYKNQVQYCTKQQDHKIDQTLDMRELVPLIQPALENGEKVTGTFA
                     VRNVDRAIGTVAGSFISKKYGAEGLPEDTISLDFVGSAGQSFGAYTPLGMTLRIHGDA
                     NDYFGKGLSGGKLIVSPDAKTPIKPHDSAIVGNVTLYGATGGYAYVHGKAGARFAVRN
                     SGATAVVEGIGDNGCEYMTGGAVVVLGEIGENFAAGMSGGVAYLYTNNKQATTAKINH
                     ELVNSRSTLNTSELTKLKQLIEQHANLTGSNFAKDILQNWEAEKANFIFVIPNEYEMM
                     LTRITTLEQTGKTHDEAELQAFYEHKDGKLVAGVAK"
     gene            9600..10487
                     /locus_tag="U0308_001962"
     CDS             9600..10487
                     /locus_tag="U0308_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2316923.1"
                     /translation="MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELG
                     VHLFDRVGRNMQLTSVGQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLS
                     TKVLPSVISTFREKYPQITYQFMEGTNEELTEMLLSGVLDMTFLSPVPESSEQIEAIR
                     FFDEKLKLIVPKTHPLAENFTVSLKELASEKFVLYPEDFDLYKIVTKAANKKGFEPQI
                     AFQSRDFYTIQGLVGAGLGISILPEMILDGAIFKETKSIALRDKELRRSVGIITTKKR
                     NLSPSENLFRSFIISFFSN"
     gene            complement(10484..11002)
                     /locus_tag="U0308_001963"
     CDS             complement(10484..11002)
                     /locus_tag="U0308_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEM2316924.1"
                     /translation="MIIRKEQPQDYEAIRRVNEEAFKGTVEADLIESIRTSDYYQPGL
                     SLVAEAEDGLIVGYIMFSEISLEAAGRSRFILALAPLAVLPAYQGTRVGSRLMEEGIR
                     LSREKAYPAIAVLGHADYYPRFGFIPSEQFAIPAPFDVPAEYFMLLELYDGSLENLAG
                     TIHYPAAFSENN"
     gene            complement(11005..12111)
                     /locus_tag="U0308_001964"
     CDS             complement(11005..12111)
                     /locus_tag="U0308_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase family
                     protein"
                     /protein_id="HEM2316925.1"
                     /translation="MLNKELIVRGAPQEYLCQVGAWDTLPTHLERRGLKNVLVVRGNA
                     SWEVAKKKFPVLSTVTSTFEVYNGGSTYEERDRLVAIMETNKMDAIIAVGGGKIADVC
                     KATAAVLRLPVIILPTLASTCAAYTPLSVMYDEEGAMIRYDVFASSNALLLIDPEMIL
                     DSPKELLVAGIGDTLAKWYEADVIINSLPTKSVEIEIAHFAAKMCRDNLLQYSEEALA
                     AMDKQVLNEAFVKIIETNILVGGMVGGFGDDYGRCAGAHSIHDALTMVPETHHLLHGN
                     KVAYGILVQLVIENRWDEIERLLPFYSELGLPMSLYDMGLATLAEETLVAVSKRATEP
                     HETIHMMPGEMTADVVLNAMKQLEDSMAMKRVAK"
     gene            complement(12203..13018)
                     /locus_tag="U0308_001965"
     CDS             complement(12203..13018)
                     /locus_tag="U0308_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2316926.1"
                     /translation="MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLD
                     DSFVPMGFRDKDDNLVGFDIDLAKAVFAEYGIKAKFTPIDWTMKESELKNGSIDLIWN
                     GYTVTDARKKQVAFSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAK
                     KTEVLTDIINNNEPELYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNII
                     TGGFDATDFAVGMRKSDKELQTKINEAFEKLYKEGKMQEISKKWFGDDEIAKQ"
     gene            complement(13020..13667)
                     /locus_tag="U0308_001966"
     CDS             complement(13020..13667)
                     /locus_tag="U0308_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM2316927.1"
                     /translation="MLEIKNLSKKFDQKTILDNVNISLQDGEILSIVGPSGGGKTTLL
                     RCISGLEKMDTGEIFIDEEKIDPMSRKDVENTIGVVFQEFHLFPHLSVLDNLILAPTL
                     ARKTKKADAVKEAERLLGLLDLADKANSMPYQLSGGQKQRVAIARALAMNPKVLLFDE
                     PTSALDPDLRDHVAALILSLKKVGITQIIVTHDHTFAEKVADQMMEVEPLKKEAI"
     gene            complement(13678..>13873)
                     /locus_tag="U0308_001967"
     CDS             complement(13678..>13873)
                     /locus_tag="U0308_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM2316928.1"
                     /translation="INLVKDSSLVYILGIGDLLRAGKIAMSRDVTLIPLVLVAAIYLA
                     LTAILTILFKQLEKRFSYYK"
BASE COUNT         3929 a         3068 c         2451 g         4425 t
ORIGIN      
        1 atatacaatg ttcagacgct ataaagtaaa aataaaatag caattcactt gaaaccgatt
       61 acataatata ctataataac cttgtcgaaa cgtttctatg aaatattgtg tatgtgaatt
      121 aattttcaca atttgcttca tcccgtacgg cgcactagtt ccgtgcaaca gtttttattc
      181 tttaacagct tttagttaat caagttgctt tgaaaaaaac aaaaaatgga ggaaaaatca
      241 tgaagaaaaa gatgtttgtc gttttagctt tagtgttgtc gcttagttta gtgttaatgg
      301 cgtgtggtgg gtcaaaggat gatgcaaatt ccggcgattc taaagtatta aatgtttggg
      361 caatgggtga tgaagccaag tcactaaaag aactcgcaca aaaattcacg aaagatactg
      421 gcattgaagt taaagttcaa gttattcctt gggcaaatgc acatgataaa ttacttacag
      481 ccgttgcttc taaatctggc cccgatgtag tccaaatggg aactacttgg atgcctgaat
      541 ttgtcgaagc tggcgcacta cttgatatta caaaagatgt cgaaaaaagt aaaaatatga
      601 attctgatct atttttccca ggttcagtaa aaactactca atttgacggg aaaacttacg
      661 gtgttccgtg gtatgcagaa actcgcgtat tattctaccg taccgattta ctgaaaaaag
      721 ttggttataa tgaagctcca aaaacatggg atgaactatc cgacgctgca cttaaacttt
      781 ctaaacgtgg caaagatatg tacggctttg ccattgatcc aaacgaacaa acgactggtt
      841 tcattttcgg acgtcaaaac ggctcccctc ttttcgataa agatggtcaa ccagtattca
      901 ataaaaaacc tttcgtagac actgttagtt atttagatag tttcattaaa aatggttccg
      961 ctccagatac tgatcttggt ttagatgctt ctcaaagctt cggcggcgac ggtattgtgc
     1021 caatgttcat gagtggtcct tggatggtta atacactgaa agacactgcc cctgacattg
     1081 acggaaaatg ggctactgca gtattaccta aaaaagaaaa taacgaatca agccttggtg
     1141 gcgctaacct ttccattttc aaatatagtg ataagaaaga tgatgctcta aaattcatgg
     1201 actacatgag tcaacctgat gtgcaattat cttggttaaa agatacaaac tccatgccag
     1261 ctcgtatgga tgcttgggaa gatgatatgc tgaaaaatga cccttactac aaagtattcg
     1321 gcgaacaaat gaaaacagct gaaccaatgc cacttatccc acaatttgag gaaatcgctc
     1381 aattatatgg aaaatcttgg gaacaaattt atcgtggtgg tgcagatgta caaacacaaa
     1441 tggatacttt caacgatcaa gtagaagcac ttcttaaaaa ataacgaata aaaagggcaa
     1501 atgatttatt ctgccatttg cccttttaga atggactgga tgttatgaaa caatttttaa
     1561 ataaaaatac accctatttg tttatatcgc cagcactgtt tttacttctt ctgttttccc
     1621 tacttccgat tttgcttgct tttgtcatta gttttacgga cattgattta gtcgggcttg
     1681 ccgattactc taaaattaac tttgttggtg tggacaatta cgtcaatatt atgcaagacc
     1741 cggtattttt aaaatctatt tttaacacgc ttttctatgt aattattggc gttccacttg
     1801 ttatcgtctg ctcgcttggt attgcgctga tgattaactt ctcacaagcg aagattttcc
     1861 aatttttccg cttaatcttc tacactcctt caattacaaa cgttgttgct gtagctgtcg
     1921 tttggagtta cttatataat ccgcgctttg gtttacttaa ctatttgctc tcgtttttag
     1981 acttaggacc agttccatgg ttacaagacc ctactattgc gaaattatca ctgattatcc
     2041 tagctgtttg gcgggcaatc ggtgtaaata tgattatttt cttagccgca ctacaaggca
     2101 ttccacgtga atattatgaa gcagcctccc ttgacggcgc aaatagccgc caacaattat
     2161 ttaaaattac ggttccaatg cttcgtttcg ccattttctt tgtaacagtt acaacgatga
     2221 ttggttggtt gcaattcttc gaggagccgt tcgttatgac agaaggtgga ccacttgata
     2281 gtacgaactc tgtcgccctc tttatctatc aaaacggttt ccaattaagt aaatttggtt
     2341 atgccgctgc tggatcgttc atcttgttta tcgcgattat tattatcacg attattcaat
     2401 tccggattca gcgcaaaaat aatgatgggg atatttaaga gaggagtgtt tataaatgaa
     2461 tcaatataga caaaaatcgc gcggcgctca aattgccgta attacaattt taacggttgg
     2521 cggattcttt atgattttac cgttcatttg gatggttctc tcctctttga aaacggatgc
     2581 tgaaatttta aaaatcccac ctactatttg gccagaaact ttcacactag ataatttcac
     2641 caaactattt actgaaatgg actttgctat ttacttaaaa aatacgttaa tcattgtgtt
     2701 cttctcgttt ttcggtttat ttttaaatgc gatggcgggt tacggctttg ctaaatttaa
     2761 atttaaaggg aaaaacaagt tattttatct tgttcttgct acaatgatga ttccaggaca
     2821 agtaacaatg attccggttt acttgctgct taatgcggct ggattaacga atacgatgac
     2881 agggattgtg cttccaggac ttgttggggc attcggaatt ttcttattcc gtcaatttat
     2941 gtccaccata tccgatgatt tactcgaagc agcaagactt gatggcgcta gtgaatttta
     3001 tattttctgg cggatagtta tccctatttc ccgccctgtg cttgcggtac aaggtattct
     3061 tactttcatc gctggttgga actcgttctt atggccgtta atcattgcca acgacgaaaa
     3121 attctacacc ctatcagttg gccttcaatt attaaaaggt caatatggca gcaactacgc
     3181 cttacaaatg gccggagcaa ccttcatggt tattccaatt atcttgattt tcatgacatt
     3241 ccaaaagtac attttaaaag gcttcaacgt ttctggaatg aaataattag tcaaaaaaga
     3301 gcttacccat ttaggataag ctctttttta ttatggtaaa aatgtttcac ccatcaagta
     3361 aaagtctact tcacgagctg cttctcgtcc ttctgcaatc gcggttacaa ctaaactttg
     3421 accgtgacgc gcatctccgc aagcgaatac gccctcttcg cttgtgcggt aaaatccttt
     3481 agcagcatct atcgtatggc gctctgtttt tcctacacca aagtttgtaa aaatatcttc
     3541 ggttgttcct gcaaaaccaa tcgcaattag aaccatatct acttcaaagt atttttcgct
     3601 accttctaca ggtgtatatt ttctttctgc cttattttct tctacttcta cagtatgcag
     3661 tccaataaga tttcctgctt catctttttc aaaagaagtt gtattaataa ggtactcacg
     3721 tggatctctt ccatacactg cttccgcttc ttcgtgcgca taatccattt tgaaaacacg
     3781 tggatattgc ggccaagggt tttcgccatc acgcaattcg ggtagtttat cttgaatacc
     3841 gaattgataa atactttttg ccccttgtct gagcgcagtt gccacacagt cagcacctgt
     3901 atctccacca ccgataatca ccacattttt acctttagca gaaagtgttt gtaccccgcc
     3961 gttatccaga ttatcacgcg tactttgcga taaatacgga acagcgaagt gaatcccaac
     4021 tgcatcacgt ccagcaagtg ggatatcgcg cgcattccct gctcctgtcg caagaacgat
     4081 agaatcatac tcttctcgta gttctgcaaa agtaacatct gtccctgctg caacacctgt
     4141 gacgaattcg attccttctt ccgccatcaa gttcactcgg cgcgttactt gttctttctc
     4201 cagtttcatc gttggaatac cgtacattaa taagccacca atgcgatcac ttttttcaat
     4261 gaccgttacg ctatggccag ctttatttaa ttgatcggcg caggcaagtc cagccggtcc
     4321 tgacccaatc acagcaattc gtttaccggt acgtttttta ggaggagccg gtttaatcca
     4381 gccttcttca aaacctcggt caataatcgc tttttcgatg gatttaatcc ctacagcagg
     4441 ttccgaaatt gccaccgtac agccaccttc acacggtgcc ggacaaatac gaccagtaaa
     4501 ctctggaaaa ttatttgttt ttaagagtag ttgtaaggct tcataccagt caccccgata
     4561 aacggcatcg ttccactcgg gaattaaatt atgcagcgga cagcctgaaa caccattttt
     4621 aatttccatt cctacactac aaaacggtac gccacaatcc atgcaacgag cggcttgtaa
     4681 tgttaaatct gctaccggca ttggtaaact atattcgttc cagtcacgtg tccggctttt
     4741 cggatcacgt cctggagagg gaattcggtc atattccata aatccagttg cttttcccat
     4801 ggtttcactc ctctctattt cgccactccg gcaactaatt ttccgtcttt atgttcataa
     4861 aaagcttgta attcagcttc atcatgtgtt tttccagttt gttcaagcgt cgtgattctc
     4921 gtcagcatca tttcatattc atttggaatg acgaaaataa aattcgcttt ctctgcttcc
     4981 caattttgca gaatatcttt agcaaaattg cttcctgtaa ggtttgcgtg ttgttcaatc
     5041 agctgtttta atttagttaa ttcggaagta tttaaagtag aacggctgtt tacgagttca
     5101 tgattgattt tggctgtcgt cgcttgttta ttgtttgtat aaagataagc aactccacca
     5161 gacattccag ccgcaaagtt ctcaccaatt tcaccgagaa caactactgc accgcctgtc
     5221 atatattcac aaccattgtc accgatgcct tccacaacag ctgtcgcacc actattccga
     5281 acagcgaaac gtgcacctgc ttttccgtgc acataggcat aaccaccagt tgcaccgtaa
     5341 agcgttacat tcccgacaat cgcggaatca tgcggtttaa taggtgtttt agcatctgga
     5401 ctaacaatca atttgccacc agaaagtcct tttccgaagt aatcattggc gtcaccgtga
     5461 attcggagcg tcatgccaag aggcgtataa gcaccgaagc tttgtccagc tgaaccaaca
     5521 aaatcaagtg aaatggtatc ttccggcaat ccctctgcac catatttttt gctaataaag
     5581 gagccagcaa ccgttccaat cgcgcggtca acatttcgta cagcgaaagt tccagttact
     5641 ttttcaccgt tttctagtgc cggctgaatt aatggcacaa gttcgcgcat atcaagcgtt
     5701 tggtcgattt tgtggtcttg ttgttttgtg caatattgga cttggttttt ataaaaatca
     5761 tcactataaa gcatattcga aaagtcgata tattttgctt tccaatgtgc ttcttttttc
     5821 tcgtgagtag ttaaaaattc tttatgtcca atgatttctg ttaaacttct aaagccaagt
     5881 tccgccatca tttcgcgcat ttcagcaacg ataaaatgga agaagttcac gacataatct
     5941 gccgaaccac tgaatttttt ccgcagctca ggattttgtg ttgctacacc tactggacat
     6001 gtatccaagt gacaaacacg catcatgacg caaccaagtg ttacgagtgg tgccgttgca
     6061 aaaccaaatt cttccgcgcc gagcatagcg gcaaccagaa cgtcttttcc tgtcattagt
     6121 ttgccatctg tttcgacaac gactttgttt ctaagtccat ttagcaagag cgtttggtgt
     6181 gtttcagcta agccgatttc ccacggcact cccgcgtgac ggatacttgt tcttgccgcc
     6241 gcaccagttc cgccttcata accgcttact aaaataacgt cggcattccc cttcgctacg
     6301 ccagcagcaa tcgtaccaat accagttttc gaaactagtt tcacattgat acgtgcattt
     6361 tgatttgcat tttttaaatc gaaaatcaat tgagacaaat cttcaatcga gtaaatatca
     6421 tgatgtggcg gtggtgaaat caatcctaca ccagttgttg aaccacgcgt tttcgaaatc
     6481 catggataga ctttatttcc aggcaagtgt ccaccttcac caggtttcgc tccttgagcc
     6541 atcttgattt gcagttcctc tgcattgacc aagtaatggc ttgttacacc aaaacgacca
     6601 gatgcaattt gtttgatagc acttctacgc caatcgccat tttcgtccgg ggtaaatcgg
     6661 ttcgggtttt cgccgccttc cccactatta cttttcccgc cgatacggtt cattgcgata
     6721 gcaagcgctt catgagcttc ttgactaatc gaaccataag acatcgcgcc agacttaaat
     6781 cgtttaaaaa tggcttcggc cggctctact tcgtccagtg gaatcggctt gcgatcactt
     6841 gtaaaagtga gtaatcctct taaaaaggca ttattttgat tttgcattaa atctgaataa
     6901 agattatacg tttcacggtc attttctcga gtagcttgtt gcaaagaatg aatcgctagt
     6961 ggattgtaga catgatattc tccgtttgag cgccactgat attccccgcc tgtattaagc
     7021 gtgaaactct ggtagccgac atcatgatag gcttcgcgat gacggagcca agcttcttgc
     7081 gcgataactt ccagtggaat cccgccaatt tgcgaggctg ttcccgggaa ataatgttta
     7141 attacatcat caccaatacc gattgcttca aaaatctggg caccacggta actttgcact
     7201 gtagatatcc ccattttgga catgattttt agaattccat ctgtaattgc ttcaatataa
     7261 cgactttccg cctcatcaag tgtaaatcct ttcatccgtc cttctttaat caagccgtca
     7321 aacgtatcga tagcaagact tggaaatacc gcgtctgccc cgtaaccaat taagagcgca
     7381 cattgatgga catctctcgc ttccgctgtt ttcacaacaa tactcacttg tgtacgcgtc
     7441 ccagctttaa ctaaatgatg atgtaatcca ctgacagcta agagagaagg aatgccaatc
     7501 caatccgcat ttaccccatc atctgataaa atgagcaatt ctgccccagc tgcgattttt
     7561 tcatctgctt ctacaaataa tgattctaag cgagcttcta aaccatctct ttcctctgcc
     7621 ttaaataaaa ttggtaaagt gacagtcggt tgggcaaatt ttgtttgttg ctcaagtgcc
     7681 gcaaattctt ttcgagataa aattggtgtt ttcaagcgaa tccggttagc attttgagca
     7741 gttggattta gaatattacc ttcatcacca agtaacgtca tcgcagaagt taccgtttct
     7801 tcgcgaatcc catcaatcgg agggttggtt acttgcgcaa aaagttgttt aaagtaatta
     7861 aataacactt gtggtcgttg gcttaaaaca gcaagtggtg cgtcataacc cattgcgccc
     7921 attggatctt ttttctctgt taccatcgga atcaaaattt tatttaactc atcttgagtg
     7981 taaccaaatg cgcgttgttt tttaaaacgt tctgatttat ccattgcttc ataatgtaaa
     8041 tcggctgttg ctaaatcggc aatttctgtc atttctgctt ccaaccattc acggtacggt
     8101 ttttccgttg ttagttcttc ttttaattca gcatccgtca caattcgtcc ttcttctaaa
     8161 tcaattaaca acatcgttcc cgcgccaacc gtttctttgc gaataatttc actcgaatcc
     8221 actggcacaa cgcccgtttc cgaagaataa ataatcgtat ggtctttcgt ttcataataa
     8281 cgcgccggac gtaagccatt tctatccaaa atcgtcccaa taactcgacc attcgtaaag
     8341 gaaatggatg tcggcccatc ccacggctcc attaatgtac tatgatattc gtaaaaagca
     8401 cgtttcggat ccgtcatatg cggattttta tcccatggtt ctggaataag catcattgcc
     8461 gcatgaggta acgaacggcc tgcctgcact aaaaattcta aggcattatc caaagtagcc
     8521 gaatcactac cactttcgtc aataattggt agcaatttgg ctaaatcttc tccaagtaaa
     8581 tcagattctg ctcttttttc ccgagctttc atccagttga cattaccacg ttgcgtatta
     8641 atttcaccgt tatgaattaa atatcgatac ggatgcgccc gctcccaact aggaaaagta
     8701 ttcgtcgaaa aacgagaatg cactagcgca aaagccgata catatgctgg atctgctaaa
     8761 tctaaatagt attgattaat ttgttctggt agtaacattc ctttaaaaat aaccgttctt
     8821 gtggataaac ttggaacgta gaaagtctct gtaatttgct tagaagtcgc agcaaatttt
     8881 tcgatttgct ttctaattaa ataaagtgct cgttcaaacc cagcttcgtc taacttggca
     8941 tttttttgaa tgaatagctg ataaatcgct ggttctgttt ttcttgcacc ggcacccacc
     9001 tttgttacat cagttggtaa tttgcgccaa ccaaggaacg tttgaccttc actcgcaatc
     9061 agtttttccg tttcggccat taaacattcg cgttctgttt tattttgagg gaaattaaac
     9121 atcccaaccg cataatgata tttttcaggc aaattaatac ctagtttgct acactcgcgt
     9181 cggaagaaag agtctgaaat ctcaagtaaa ataccagcgc catcacccgt atccccacca
     9241 acttctccac cgcggtgctt taattgacaa agcatatgaa taccttgttc gacaatttta
     9301 tgagaagaaa tctttttaat atttgctacg aagccaattc cacaagcatc gtgctcattt
     9361 tctgggttgt ataggccgtg tttttttggt aaattagttt gtttcatcct agttcctcct
     9421 cttcaaaaac cgaatccttc taagtctttc tggtaattat ttaaattaac tgataattaa
     9481 ccagcgattc agcttacctt acatttcttg tagtatctat tttattcctt ttcatttatc
     9541 gaaacaatat atataataga ataaaacaat ctcatttcga gaacaattgg aggtaagaaa
     9601 tggaactgcg acaattaaag tattttatgg aagtagcccg tgtcgagcat atgaccaaag
     9661 ctagtgagaa tttacacgta gcccaatctg ccgttagtag acagataacg aaactcgaag
     9721 aagaactcgg cgtacattta tttgaccgtg ttggaagaaa tatgcaactc accagcgttg
     9781 gtcaagattt cttaaaacaa gcagcaatcg ccttaaacga gctacaaaaa gccgaagcac
     9841 tcgtgaccga atataccgat cccgcaaaag gaactgttcg cgtcggctta ccgaactccc
     9901 tgtctaccaa agtgttgcca tccgttattt cgacctttcg ggaaaaatat ccgcaaatta
     9961 cctaccagtt tatggaaggc accaatgaag aacttaccga gatgctctta agtggcgtcc
    10021 ttgatatgac ttttttatcg cccgtcccag aatctagcga acaaattgaa gccattcgtt
    10081 tttttgatga aaaattgaag ctaattgtcc ctaaaaccca tccacttgct gaaaacttca
    10141 ccgtttcact aaaagagctc gcttccgaaa agttcgtcct ttatccagaa gactttgatt
    10201 tatataaaat cgtaacaaaa gctgccaata aaaaaggatt cgagccacaa atagcatttc
    10261 aaagtagaga tttttataca attcaaggac ttgtcggagc aggtcttggt attagcattt
    10321 tgccagaaat gattttagat ggagcgattt ttaaggaaac gaaaagtatc gctttgcgtg
    10381 ataaagaatt gcggcgttcg gtcgggatta ttacgacaaa aaaacggaac ctatcccctt
    10441 ccgagaattt gttccgttcg tttattattt cgttcttttc gaattaatta ttttcagaaa
    10501 atgcagctgg ataatggata gttccagcta aattttctaa actaccatca tataattcta
    10561 ataacataaa gtattcagca ggcacatcaa atggcgcagg aatagcaaac tgctcagaag
    10621 gaataaagcc aaatcgcgga taataatcag catgtccaag cacagcaatg gccggatatg
    10681 ctttttcgcg tgataaacgg attccttctt ccattaatct cgagccaact cgcgtccctt
    10741 gatacgcagg taaaacagca agtggcgcaa gtgctaaaat aaatctgctt cgtccggctg
    10801 cttcaagcga aatctcacta aacataatgt acccaacaat aagtccatcc tccgcttctg
    10861 cgacaaggga taaacctggt tgataataat cggatgtccg gatactttca atcaagtctg
    10921 cttccacagt acccttaaaa gcttcctcat tcacacgacg aatggcctcg taatcttgtg
    10981 gttgttcttt ccgaataatc atttttactt agccactcgt ttcattgcca tactatcttc
    11041 taactgtttc atcgcattta atactacatc agctgtcatt tcaccgggca tcatatggat
    11101 tgtttcatgt ggctccgttg cacgtttaga tacggccaca agcgtttctt ccgcaagtgt
    11161 cgcaagtccc atatcatata aactcatcgg aagaccaagc tcagaataaa atggcaacaa
    11221 acgctcgatt tcatcccatc tattttctat tactaattga actaaaatac cataagctac
    11281 tttattacca tgcaataagt gatgtgtttc tggaaccatc gttagcgcgt catgaatcga
    11341 atgcgctcct gcacaacgtc cataatcatc gccaaaacca ccgaccattc caccaactaa
    11401 aatattcgtc tcaataattt taacaaacgc ttcattcaat acttgtttgt ccatggcagc
    11461 aagtgcttct tcgctatatt gcaacaagtt atcacggcac attttggcag caaaatgcgc
    11521 gatttcaatt tcgactgatt tagttggtaa ggaattaata atcacgtctg cttcgtacca
    11581 tttggctaac gtatcgccaa ttccagcaac tagtaactct ttcggtgagt ctaaaatcat
    11641 ttccggatca attaataaca gcgcattact actcgcaaac acatcgtaac gaatcatagc
    11701 gccctcttcg tcgtacatca cactaagtgg tgtataagcg gcacaagttg atgcaagtgt
    11761 cggtaagata atgactggta aacgtagaac tgctgctgtc gctttacata cgtcagctat
    11821 ttttccgcca cctactgcga taatcgcatc catcttattt gtttccatga ttgccaccag
    11881 acgatcgcgc tcctcgtagg tagaaccacc attatatact tcaaaagtag atgtaacagt
    11941 tgataaaaca gggaatttct ttttagcgac ttcccaagaa gcatttccac gaactactaa
    12001 tacatttttc aaaccgcggc gttctaggtg agtaggtaat gtatcccacg cgcctacttg
    12061 gcataaatat tcttgcggag ctccgcgaac aatcaattct ttattcaaca aaaatcatcc
    12121 cttctgtctg gcacggtcgg atattcggct gcgacattta taattcaaat tgtataggaa
    12181 cttaaaccta ctgtcaatcg cactattgct tagcgatttc gtcatcaccg aaccattttt
    12241 tactaatttc ttgcattttt ccttctttgt ataatttttc aaaagcttca ttgatttttg
    12301 tttgcagttc tttatcactt ttgcgcattc ctacagcaaa atctgtggca tcaaaaccgc
    12361 ctgttataat gttgtaatcg tctttatttt tttgtttatc aatgtaataa cgcgcgtaca
    12421 cttcatcaat gattaaacca tcgattcgtt tgttattcaa atcaataaaa gctgtatcaa
    12481 acgtatcgta taattctggt tcgttattat ttataatgtc tgttagcact tctgtttttt
    12541 tcgccatgtc atcgatcgaa cttgccccat tttgtgctcc gagcgtttta ttcttcatat
    12601 cgctaaattg attaatattg cttgatttta aagtgactaa tacttgttca tttttcatgt
    12661 aaggctggct aaaagcgact tgttttttcc tcgcatccgt cacagtatat ccattccaaa
    12721 ttaaatcaat cgagccgttt ttcagttcag attctttcat cgtccagtca atcggtgtga
    12781 attttgcttt aatgccatat tctgcaaata cagctttcgc caaatcaata tcaaagccaa
    12841 ctaagttatc gtctttatca cgaaatccca tcggtacaaa actatcatct aaaccaatta
    12901 caacttcttt atctttttta attctactcc actggtcctc tttagattca ccgctggaac
    12961 aagctcccag cgctaacatt accattaaca ttacagttat taataatcct tttttcatgt
    13021 tagattgcct ccttttttaa tggttctact tccatcattt gatccgctac tttttcggca
    13081 aaagtgtgat catgtgtaac gataatttgc gtaataccaa cctttttcaa acttaaaatt
    13141 aatgctgcaa catgatcgcg caagtcagga tctaaagcgg atgtcggttc atcaaatagc
    13201 agcactttgg gattcatcgc aagcgctctg gcaatcgcga cccgttgttt ttgtccgcct
    13261 gataattggt acggcatact atttgcttta tcggctaaat caagtaagcc aagtaatcgt
    13321 tctgcttctt taacggcatc tgctttcttt gttttccgag caagggtcgg tgctaaaatc
    13381 aagttatcta aaacacttaa atgcggaaat aagtggaatt cttggaaaac aacaccaatc
    13441 gtattttcca catcttttct cgacattgga tcaatttttt cctcgtcaat aaaaatttca
    13501 cctgtatcca ttttttccag tccactaata cagcgcagta aagttgtttt cccaccacct
    13561 gatggaccaa caattgagag aatttcacca tcttgaagag aaatattcac attatctaaa
    13621 attgtttttt gatcaaattt tttcgataga ttcttaattt ctaacatttt cttcacctca
    13681 tttataataa ctaaaacgtt tttcgagttg tttaaataat atggttagaa tagccgttaa
    13741 agctaagtag attgcagcta ctaatacgag tggaatcagt gtaacatctc tactcatagc
    13801 aattttccct gctcttagta agtcgccaat tccaagaata tatactaaag aagagtcttt
    13861 tactaagtta ata
//
LOCUS       DASDYK010000071        13849 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.071, whole genome shotgun sequence.
ACCESSION   DASDYK010000071 DASDYK010000000
VERSION     DASDYK010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13849)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13849)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13849
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.071"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(91..999)
                     /locus_tag="U0308_001968"
     CDS             complement(91..999)
                     /locus_tag="U0308_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HEM2316929.1"
                     /translation="MTEEKGILLQSGTNELEIVTFTVGENLFCINVLKVKEIIHPLEV
                     TPVPDSNPAIEGVSQVRGEIMPVVNLARVMKLPEIEPENTKFIITELNQMKIVFRVDE
                     VHRIQRISWEQIEEPEKLSIGLEELAVGIVKLDGNLVLLLDYEKIIYEISGNADFAVT
                     GEDRMARKVNREEKTIFIAEDSQMLRQLLEDTLHEAGYTNLQFFANGREAQEHIFKLL
                     KEQKEQTFENVNLLITDIEMPQMDGHHLTKVIKEDEIGRELPVVIFSSLITEDLEHKG
                     AGVGADAQVSKPNIHQLINILDELVL"
     gene            complement(1012..2925)
                     /locus_tag="U0308_001969"
     CDS             complement(1012..2925)
                     /locus_tag="U0308_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM2316930.1"
                     /translation="MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETK
                     EIAQEFTDFVYDFEWTGNFSDARNFAAKHATGKWILAIDADECLEEESYRKLEKQLKS
                     PIEPIQMAQIISFTGEKGRVTTTNQMARVYKNDGTICFRGVIHEQLEAVDKHPIAAGV
                     AEVKIYHYGYMTEIVEKQDKSDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGNKKEA
                     LKEFSEAFRLRDHNHYIWAKLSAYHIAELLEQEKRYDESLAIIEEARIIWPNVPEFPL
                     KKANILYVNHQLEDAKEIYQSLLENTAIDYQSIVLYEATNFMPHKMLGTIYLEEKDYT
                     RAMTHFSKAYAENSSDYGVMFQMIMLLSKFHQPKEIFAFMERHHFISSTETGLRLLSM
                     TTQQGYAELSELIVQSLTDVYPPIAEATEVKIATIRNVFPVISESAILFGIKEELIDA
                     ADLCLWHYENPQLPIERVMKNSDVGDIYDFIFENGPRISKKRYLFVLERAIALGKGEF
                     ADYLLALRNVYHDSINSHIADLFFQYDFADIALDFYNIVDADEVTKQGYINLINYLVD
                     AEVLDEALAIAERGIDNFSTDFRFYLWTIKIDTENRANRISEAMDEFPNNRYLAKLLD
                     EVTMLQDTVTNNR"
     gene            complement(2948..3448)
                     /locus_tag="U0308_001970"
     CDS             complement(2948..3448)
                     /locus_tag="U0308_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316931.1"
                     /translation="MQLFLSGSHTLTDYDKQEIQAYLEKFAPVNHIHLLCYKSIENEV
                     LQFFLKKEHLAPRLSIYTFAPKECLPEPFLSTIDYLECLGSSYQSFGYFDTVIAKPTY
                     EKFLAQIVSKMDLVCCFYNGDKPTDVIPVDVAKSFDVQSMIYDLPKAKKHLLHRASSD
                     KIKLVN"
     gene            complement(3458..4285)
                     /gene="motB"
                     /locus_tag="U0308_001971"
     CDS             complement(3458..4285)
                     /gene="motB"
                     /locus_tag="U0308_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEM2316932.1"
                     /translation="MAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAK
                     KFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAK
                     KAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDDILFQSGS
                     AELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFM
                     EAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE"
     gene            complement(4245..5096)
                     /gene="motA"
                     /locus_tag="U0308_001972"
     CDS             complement(4245..5096)
                     /gene="motA"
                     /locus_tag="U0308_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HEM2316933.1"
                     /translation="MEITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTI
                     TAVMMAHPWSDVKVVPKLFKILFTKEKMPDKVEVLVQYKEYADEIRRSGVLALEDSVD
                     EIEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGV
                     LGAAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVH
                     LRYMMIEGVVALQERNAPRVVEERLLSFLSPKEKDVLRNGKGKKTREVEEIERGQASQ
                     ETAGGTR"
     gene            complement(5123..5458)
                     /locus_tag="U0308_001973"
     CDS             complement(5123..5458)
                     /locus_tag="U0308_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3964 family protein"
                     /protein_id="HEM2316934.1"
                     /translation="MGRIENIKNLAFFEDKPGLAEQILMLEKKTQLFLPNEFEIRQTV
                     GYEIGDKEVILGRLESFYFLALKGVGEDNYRSQAFASEADAKAFFVHLPEMENELVAF
                     WLNEVELVR"
     gene            complement(5483..6271)
                     /locus_tag="U0308_001974"
     CDS             complement(5483..6271)
                     /locus_tag="U0308_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HEM2316935.1"
                     /translation="MIPDLEKDYLYFTRVVKRDLGLDLALYKETQMKRRILSFIVKKQ
                     YITFGEFFKHLKKDAVLLDEFISLITINVSSFFRNRNRWDALEKQVLPRLLEDSRGKL
                     RVWSAACSSGEEPYSLAMMMERSVGTRHYDILATDLEPAILKRAVIGEYQSRQMEELT
                     EQERHTAFVEKGDTYQILPKYRKSIRFRRHDLLTDYYEKGFDLIVCRNVLIYFTAEGK
                     HQAYQKFAESLRRGGVLFIGGSEQILNPADYGLATLNNFFYIKT"
     gene            complement(6300..7079)
                     /gene="flgG"
                     /locus_tag="U0308_001975"
     CDS             complement(6300..7079)
                     /gene="flgG"
                     /locus_tag="U0308_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HEM2316936.1"
                     /translation="MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVIS
                     RNKVNYQNGPVARQVGTIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNF
                     FITAKNGEISLSRGGQFHSDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLY
                     NAETGQYLGRLGTKFVSANQADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGVIETSN
                     VDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDKEATGLIRQ"
     gene            complement(7076..8299)
                     /gene="flhF"
                     /locus_tag="U0308_001976"
     CDS             complement(7076..8299)
                     /gene="flhF"
                     /locus_tag="U0308_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HEM2316937.1"
                     /translation="MGKHLVEKMEIFKANSKREIHKKIRLVTNEPYKITDERVTKLGI
                     FKKQYEVTAVIMSEVAIADGRMDFQETFQKSVVKNRPKTDDLLKKEKLLEMLAAGAEL
                     AQSTPLLEERKTQEEELSAMRLELAALNRELAVKMREEREQNSDFVKFLKGRGISDTY
                     VADFMQAGRKQFKQVETAHLDDITDWFVPYLSGKLAVEDSFDLSNHRIISLIGQTGVG
                     KTTTLVKLGWQLLKQNRTVGFITTDTFRSGAVEQFQGYADKLDVELIVATSPAELEEA
                     VQYMTYVNCVDHILIDTVGRNYLAEESVSEISAYTDVVHPDLTCFTFSSGMKSADVMT
                     ILPKLAEIPIDGFIITKMDETTRIGDLYTVMQETNLPVLYMTDGQNITENIFRPKSRW
                     LAERFVGTDRRRVLE"
     gene            complement(8321..10396)
                     /locus_tag="U0308_001977"
     CDS             complement(8321..10396)
                     /locus_tag="U0308_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HEM2316938.1"
                     /translation="MGNLGAIKKYFAILIAVSFVIALIVPLPPFVLDLVLVTILAFSV
                     LVYMRATSIKDWNELKSFPSLLLLMGIFRVSINISTTRAILTTGDPGQVIKQFGNFVI
                     GSNFVVGIVIFIILIVFQFIVANGSSRTAEVAARFTLDALPGKQMAIDADLNQRLITE
                     PEAKEKRAYLNMETEFYGAMDGAGKFVKGDVLFTVLLAVVNIVFGLIVGMVQGGLSFG
                     EAAVKYTELTIGDGIVSQIGSLLMAMSAGVIVTRVFDGSDDNVAVGIFKELMQNSVVV
                     YTLAAMFILMGVFSPLPTIPFVGIGVVLGIIGYRTQFNLKKKEQLELEKEMELIQSET
                     SSAEAEHNQAFGAAREKFPVVVELGLNIAALVKQKMNGETAKDKVVLMRKSILQDLGI
                     GVPGINFKDNTSFQPRGKYEIKVKGVAVASGVLKAGHLLALKTPGVMMDLDAEPTKDP
                     IFGEDGYWILPGELEDAQMKNYQVLEPLSILITHLDVVLRKNLHELLMRQQIKDLIDG
                     LADENQILIDEIKKKEIDYSLIQGVLRQLLKEGISVRDLPTIVEGIIDGQTIYPNDLD
                     GITAFVRERISKVICEQAKNQDGKIYALLLQDSIEMDTEIVNTPYYGYALNWALDKEL
                     PIIQKVRDTVNKAQLTGREPVILTRRKDFRFGFVRVLERYQLDVPVLSISELSPETEV
                     EQIALIEPT"
     gene            complement(10443..11489)
                     /gene="flhB"
                     /locus_tag="U0308_001978"
     CDS             complement(10443..11489)
                     /gene="flhB"
                     /locus_tag="U0308_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhB"
                     /protein_id="HEM2316939.1"
                     /translation="MAKDNKTEKATPRRIKKARNEGNVAKSKELNNAFSLLIVAGLLY
                     FFGEMFIKNTIQAFVALLKQPPKLANMESYSLFYLMEFGKVLMPIMVMVVIFGLMNYG
                     VQVGILFSAKAVKPQFKRLNPANYFKRVFSVKGIVEVVKALLLITLLSYVAYIGFRDH
                     LDTLISYTGQNWLYSLGQIFALFKNEFLALFLVIAVIGLLDFFYQRYDYKKGLRMSKQ
                     EIKDEMKDSEGRPEVKQRQRSIARGLLQGSITKKMADATFVVNNPTHISVVMRYDKTK
                     DHAPKLLVKGEDELALFIRQVADTDGVPMITNRQLARSIYYTTNPDEYIQEDLYKDVI
                     EVMKELMDADKIKF"
     gene            complement(11505..12266)
                     /gene="fliR"
                     /locus_tag="U0308_001979"
     CDS             complement(11505..12266)
                     /gene="fliR"
                     /locus_tag="U0308_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HEM2316940.1"
                     /translation="MEFEFFLAVVIVFSRVASFLFFFPLLKGRNIPNSVKVVFGMAIS
                     IPVATGVDVSGITTLPDLLLRVTSEVVFGLALAKLVEIIAVIPKMAGFMIDYDLGFSQ
                     VNLIDPSYGTQNSITAAILDTFFVVIFLSLQGMDYLIYYLMKSFEFTASVSILFEKGF
                     IDLLLGTLGFALASAVSIALPIMGSIFIVNIILAFISKSAPQINIFMNAFIIKITFGI
                     FILACAVPILSTVFKNLTDEMIQQYVSFFDYLLKK"
     gene            complement(12269..12541)
                     /locus_tag="U0308_001980"
     CDS             complement(12269..12541)
                     /locus_tag="U0308_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliQ"
                     /protein_id="HEM2316941.1"
                     /translation="MNLTPITQIFQDFFYSGLALILPVSLICIVVVIVVAILMAMMQI
                     QDQSLTFLPKIVAFVVALFILGPWMFEHMTDLFVGIFSKLPLMIRV"
     gene            complement(12554..13321)
                     /locus_tag="U0308_001981"
     CDS             complement(12554..13321)
                     /locus_tag="U0308_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein flip"
                     /protein_id="HEM2316942.1"
                     /translation="MRKIASRRVFQVSFIVIFAISLVVFWPGVNVHAESWLDSLGVNG
                     TDGVNSSVALFVLVTVLSLSASIVLMFTHFTYCIIVLGLTRQGLGATNLPPNQVLVGL
                     ALFLSLFMMQPLITAWYDDVYKPSQKEEWSASKVWDETKPLLTKYVAENTYKHDINMM
                     LKAEGEDPVTKKEDAPLMALMPAFILTQITQGFLTGMFIYLAFIFIDLIVSTLLMYLG
                     MMMVPPMTISLPFKILVFIFIGGYGLITNMIFQTIHF"
     gene            complement(13314..13628)
                     /locus_tag="U0308_001982"
     CDS             complement(13314..13628)
                     /locus_tag="U0308_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HEM2316943.1"
                     /translation="MEYFLSLLKIIVLLAVLAGISYFLVKKNKQANRTRKSENDLIKL
                     KDTLLISHQLRAVLLEADGEKVLAIISNNDIRTVSLKGKTDQNEALFRELLLKEETKE
                     NA"
BASE COUNT         3997 a         3202 c         2292 g         4358 t
ORIGIN      
        1 tattatcaac gtttttacgt ttttataaat tattttttta aataaaataa agaagtgttt
       61 gaacagaaaa ggttgttcaa acacttcttt ttacaaaact agctcatcta aaatattaat
      121 gagttgatgg atatttggtt tacttacttg cgcatcggct ccaacacctg cgcctttatg
      181 ttccagatct tctgtaatta acgaagagaa aataacaact ggcaattcac ggccaatttc
      241 atcttctttg attacttttg ttaaatgatg tccgtccatt tgcggcattt caatatcggt
      301 gattaataag ttaacatttt caaacgtttg ttctttttgt tctttgagca atttgaaaat
      361 atgctcttgt gcttcgcgac catttgcaaa gaactgcaga tttgtataac cggcctcatg
      421 aagcgtatct tcaagcagtt ggcgcagcat ttgtgagtcc tcggcaataa aaatcgtctt
      481 ctcttcacga tttacttttc gcgccatacg gtcttcacct gtgacagcaa aatcagcatt
      541 tccgctaatt tcgtaaataa ttttttcata atctaataag agtactaagt tgccgtctaa
      601 ttttacgata ccgactgcta attcttctaa accaatcgat agtttttctg gttcttcaat
      661 ttgttcccac gaaatacgtt ggatacgatg aacctcatcg acacggaaaa cgattttcat
      721 ttggtttagt tctgtgataa tgaatttcgt gttttctggc tcaatttctg gcaatttcat
      781 cacacgggca aggttcacaa ctggcatgat ttcgccgcga acttgggaaa cgccttcaat
      841 tgccgggttc gaatctggta caggagttac ttcgagcgga tgaataattt ctttcacttt
      901 taaaacgtta atacaaaata agttttcgcc aacagtaaat gtaacaattt ccaattcatt
      961 tgttccactt tgtagtaaaa ttcctttttc ttctgtcata ttactggcct cctatcgatt
     1021 gtttgtaaca gtgtcttgaa gcatggtcac ttcatccaac agttttgcta aatagcggtt
     1081 attcggaaat tcgtccattg cctcactaat tcgattcgcg cgattttcgg tatcaatttt
     1141 gattgtccaa aggtaaaagc ggaaatcagt actaaaatta tcaatgccac gttctgcaat
     1201 cgcaagtgcc tcatccagta cttcggcatc tactaaataa ttaattaggt tgatatagcc
     1261 ttgtttggtc acttcgtctg cgtcaacgat attgtagaaa tcgagcgcga tatccgcaaa
     1321 atcatattgg aaaaataaat ctgcaatgtg gctattaatg ctgtcatgat aaacgttacg
     1381 aagtgccaat aagtaatcag caaactcgcc ttttccaagt gcaatcgccc gctctaatac
     1441 aaataaataa cgtttcttgc taattcgtgg accgttttca aagataaaat cataaatgtc
     1501 gccaacatcg ctatttttca tgacacgttc gattggtaat tgcggatttt catagtgcca
     1561 caaacataag tcagctgcat caatcaactc ttctttaata ccgaataaaa tagcagattc
     1621 gctaattacc gggaagacgt tgcggatcgt tgcaatcttc acctctgttg cttctgcgat
     1681 aggtggatac acatcggtta gtgattgaac aattagttca gataattctg cgtagccttg
     1741 ttgggttgtc atcgaaagta agcgcaaacc agtttctgtg ctagagataa agtgatgacg
     1801 ttccataaag gcaaaaattt cttttggttg atggaatttg ctaagcagca taatcatttg
     1861 gaacatcaca ccgtaatcag aactattttc cgcataggct ttagaaaaat gagtcatcgc
     1921 gcgcgtataa tctttttctt ctaagtaaat cgttccgagc attttgtgtg gcatgaaatt
     1981 ggttgcttcg taaagcacga ttgattggta gtcaattgct gtattttcta gcagactttg
     2041 ataaatttct ttcgcatctt cgagttggtg attcacatat aaaatattag ctttttttag
     2101 tgggaactct ggtacgtttg gccaaatgat tcttgcttct tcgataatgg ccaagctttc
     2161 atcatagcgc ttttcttgtt cgagtagttc ggcaatatga taagcactta gtttcgccca
     2221 aatgtagtga ttgtggtcac gtagtcggaa cgcttcggaa aattctttca gcgcttcctt
     2281 cttattacca agtcggttca tttcttgccc aatgttaaaa tgtacaaatc cgctattttt
     2341 attgtttttt acttcttttt ctaataaacg taaattacgg tctgatttgt cttgtttttc
     2401 gacaatctcc gtcatatagc cataatgata aatttttact tcagcaaccc cagctgcaat
     2461 cgggtgtttg tctaccgctt ctagttgttc atgaatgacg ccacggaagc aaatcgttcc
     2521 gtcattttta taaaccctcg ccatttggtt cgttgttgtc actcgccctt tttcccctgt
     2581 aaagctaata atttgcgcca tttgaattgg ttcgattggt gattttaact gtttttctaa
     2641 tttgcgataa ctttcttctt ccaaacattc gtctgcatca atcgctaaaa tccatttgcc
     2701 cgttgcatgt ttggccgcaa agtttcttgc atcagaaaag ttgccagtcc attcaaagtc
     2761 atagacaaaa tcagtgaatt cttgtgcaat ttccttggtt tcgtcagtgg aacctgtatc
     2821 tacaataatg atttcttctg taaattttct aaaagacgct aaactttgtc gtaaaatatg
     2881 tgcttcattt ttgactatca tacaaatcga aattaacggc cgcatgaatc ttccctcttt
     2941 ctatcaatta attcactaat tttattttat cgctgctcgc tcggtgcagt agatgttttt
     3001 tcgcttttgg caaatcataa atcatacttt gcacatcgaa cgatttcgcg acatcgactg
     3061 gtatcacatc agtcggctta tccccgttat aaaaacaaca aaccaaatcc attttactaa
     3121 caatttgtgc taagaatttc tcataagtcg gcttagcaat caccgtatcg aaataaccaa
     3181 atgactgata gctactgcct agacattcca gatagtctat cgtcgataaa aacggctctg
     3241 gcaaacattc tttcggtgca aaagtgtaaa tcgatagtcg cggtgccaga tgctcttttt
     3301 tcaagaaaaa ttgtaacact tcattttcaa tcgacttata acaaagcaag tgaatgtggt
     3361 tcactggtgc aaatttttcg aggtatgctt gtatttcttg tttgtcatag tcggttaacg
     3421 tatgcgaacc acttaaaaaa agttgcaaac acttcaccta ctcatcttca tctagcgtat
     3481 cgcgattaat tgggcgtacc atgatttcta cacgccgatt tttttcgcga tttgctgcga
     3541 tatcattttt ggcgacaggt ctgaattctc cgtagccgcg agcactgaac tcgcctgggt
     3601 ttacttcgct attttcttga atgattgctt ccatgaaatt aacggcgcgc gcgacactta
     3661 attcccagtt ggaagagtaa attgaggtgc ttattggcac attatcggta tgtccagaaa
     3721 caatcccttc catcgttcct tttccttgcg caaaaagttc gccgatttct ttggcaatct
     3781 cgcgttttcc tgcagttaat tctgcacttc ccgactggaa taaaatatca tcacggatag
     3841 ttatcaaaag cccttcatcc gagtatttcg ttgtcatttt tgctcccaaa tgttctgctg
     3901 caatataact atcaatttgt tttttaaagg cttcaatctt ttcttcgttt tgctttttaa
     3961 gtaaggccgc tgctgctttt ttggctttct cttgttcggt tgcttctttc tttttatctt
     4021 gctcttccat cgccttcaag actgcattca cattaggatc atctggtcct ttttctttgg
     4081 atacatatgc ttgattgcct gccgcgcctt cctctacaat tttcttaaat gcatttccca
     4141 tttgttcaaa cttcttagca tcaacggaac tggaggcaaa cagaacgatg aatagcgcaa
     4201 gtaaaagtgt cagcaaatca ctatatggaa ttaaccacgt ttcatcaacg tgttcctcct
     4261 gcggtttctt gcgacgcttg gccacgctca atttcctcca cttctctcgt tttcttccct
     4321 tttccatttc gcagcacatc tttctctttt ggacttaaaa aagataataa acgttcttcc
     4381 acaacccgtg gtgcatttcg ctcttgaagc gcgacgactc cctcaatcat catatatctc
     4441 aaatgcactt ctttttgtga tttcactttt aatttattgg caaatggcgt ccaaagtacg
     4501 taaccggtaa aaataccgaa aatcgtacaa acaaacgccg cggctattgc ttcgctaagt
     4561 ttgtccgggt tcgacatttc ccccatcgca tgaatgagtc ccatcgctgc tccgagtaca
     4621 ccaagcgtcg gcgcatatgc tccagctgat gcaaaaatct tcgcataagc agcatggcgt
     4681 tcttccatac tcgctacttc ttcttccaaa acgtcccgta aaaattctgg ggaagactgc
     4741 ccatctacaa ctaagcgcat gcctcgtttc ataaatggat cttcaatttc atcgacagaa
     4801 tcttccagcg caagtacccc gctacgccta atttcgtctg cgtattcttt gtattgcacg
     4861 agtacttcca ctttgtccgg catcttctct tttgtgaaaa gaattttaaa aagtttcggt
     4921 actactttta catcactcca tgggtgcgcc atcataacag ccgtaattgt cccaagaatg
     4981 atgacaatta aagcttcagc gctaaataac atcgccagtg atatattttg aatcatgaac
     5041 gaacctgcaa tgactatcac tgccaacaca agtcctataa tcgttgttat ttccacgtta
     5101 cttcatctcc cacctactta tttcagcgaa ctaattccac ttcatttaac caaaaggcaa
     5161 ctaactcgtt ttccatttct ggtaaatgaa cgaaaaacgc tttagcatcc gcttcactgg
     5221 caaatgcttg cgagcggtag ttatcttctc ccacaccttt taaagcgaga aaataaaatg
     5281 actcgagtcg gcctagaata acttctttat ccccgatttc atagccaact gtttgtctaa
     5341 tttcaaattc atttggtaag aaaagttgtg ttttcttttc aagcatgaga atttgttctg
     5401 cgagtccagg tttgtcctca aaaaacgcta aatttttaat gttttctatt cgtcccatct
     5461 aaccaactcc atttcttttt tgctaggttt ttatgtagaa aaaattattt aatgtggcaa
     5521 gcccgtaatc agctgggttc aaaatctgtt ctgacccgcc gatgaaaaga acgccgccac
     5581 gtcttagtga ctctgcaaac ttctgatatg cttggtgttt tccttctgct gtgaaataaa
     5641 tcaacacatt acggcaaaca attaaatcaa aacctttttc gtaataatcg gtcagcaaat
     5701 cgtgccgtct aaaacgaatc gactttcgat atttaggcaa aatctgatat gtatcccctt
     5761 tttcaacaaa tgccgtatga cgttcttgtt cggttagttc ttccatttga cggctttgat
     5821 attctccaat gaccgcgcgt tttaaaatag ctggttcgag gtctgtggct aaaatatcat
     5881 aatgccttgt gccaactgaa cgttccatca tcatcgctag cgagtacggt tcctcccctg
     5941 atgaacaagc cgcactccaa acccgtaact tcccgcgact atcttccagc aaccttggaa
     6001 gtacttgttt ttccagcgca tcccagcgat tgcgattacg gaaaaacgac gaaacattaa
     6061 tcgtaatcaa actaatgaac tcatctaaaa gaacggcatc ttttttgaga tgtttgaaaa
     6121 attctccaaa tgtaatatat tgcttcttca cgataaaaga taaaattcga cgtttcattt
     6181 gcgtttcttt ataaagcgct aaatctaaac ctaagtccct tttgacgaca cgagtaaagt
     6241 aaagataatc cttttccaaa tctggaatca ttctttttcc cctcccccta gctaggtcgt
     6301 tactgacgaa ttaatccagt tgcttctttg tcgtacactt tatcaaacat attaacgaca
     6361 ttttttgaag cttgtaccat gcgctggtta tccatgagtt gtaccatttc tacgcctaaa
     6421 tcaacattag acgtttcgat aactccattt tggataatcc cttgtccagc tggtaaattc
     6481 attgtgttta tgccatttac atgaagtcta ccttcgccgt ctttcaccaa actatctgct
     6541 tgattagcgg aaacaaattt ggttccaagg cggcccaagt attgacctgt ttccgcattg
     6601 tataaatcac catttgcttc ggcgcgaatc gacgtttttt gccccacttg aatcgcttcc
     6661 ccagtcgcac tgagtaaatt ggcgccatct gctgtccgca gaaaaccaaa ctgatcggag
     6721 tgaaactgcc cgccacgtga aagtgaaatt tcgccatttt tagcagtgat gaaaaaatta
     6781 cttccttgcg taggatccgt gtcttgcata aagaaatctc ggtcgcggtt cgtaatatag
     6841 cttgatcccg ctgtcaaatt aatatgcgtc gcagcaggtc gaacaccgta atcaattgtc
     6901 ccaacttgcc tagcgacagg cccattttga tagttcactt tgtttcgcga aatcacttca
     6961 ctcgtaagct gatcaaattt gaatcctggc gtctgcgcgt tagccacgtt attagaatga
     7021 acttgaatat gttgcatgta gttcatcatc cctgctgcgc caatgtataa ccccttcatt
     7081 ccagcacccg ccttctatct gtcccaacaa accgctccgc taaccaacga ctttttggtc
     7141 tgaaaatatt ttccgtaata ttttgtccat ctgtcatgta taacaccggc aaatttgttt
     7201 cttgcatcac cgtgtataaa tcaccaatac gcgtcgtttc atccattttt gtaatgataa
     7261 aaccatcgat tggaatttct gctagttttg gtaaaatcgt catcacatcc gcacttttca
     7321 ttccagaaga aaatgtaaaa cacgttaagt ccggatgaac aacatcggta taggcagaaa
     7381 tttcactcac tgattcctcg gctaagtaat ttctcccaac cgtatcaatc aaaatatgat
     7441 ccacgcagtt aacatacgtc atatactgca cagcttcttc tagttcagcc gggctcgtcg
     7501 caacgataag ctccacatcg agtttgtccg cataaccttg gaactgctcc actgcgcctg
     7561 accgaaaagt atctgtagtg ataaagccca ctgtccgatt ttgctttaac agctgccatc
     7621 caagtttcac aagcgtggtc gttttcccaa cacccgtttg cccaatcaag gaaataattc
     7681 ggtggttgct taaatcaaac gaatcttcca ccgctaattt tccggataaa taaggaacga
     7741 accaatctgt aatatcatcc aaatgcgccg tttctacttg cttaaactgc ttccgcccag
     7801 cctgcatgaa gtccgccaca tacgtatcac taattccgcg acccttcaaa aacttcacga
     7861 aatcactgtt ttgttcacgc tcctcgcgca ttttcactgc aagctcgcgg tttaaagccg
     7921 ctagttcgag acgcatcgct gacaattctt cttcctgtgt ttttcgttct tctaaaagcg
     7981 gcgttgactg tgctagttcc gctcccgcag caagcatttc tagtaatttt tcttttttta
     8041 ataagtcgtc tgttttcggt ctgtttttga caaccgattt ttgaaatgtt tcttgaaagt
     8101 ccattcgacc atctgctatc gccacttcac tcataatgac cgccgtcact tcatactgtt
     8161 tcttaaaaat accaagcttt gtgacacgtt catccgtaat tttatatggc tcattcgtga
     8221 ctaagcgaat ttttttatgt atttctcgct tggagttcgc cttaaaaatt tccatctttt
     8281 ctactaaatg ttttcccatt tctacggatt acctccctca tcaagttggt tcaatcagtg
     8341 caatttgctc cacttctgtt tccggcgaca gttcactaat ggagagcacc ggcacgtcca
     8401 attgatatct ttccaaaact cgcacaaagc caaatcgaaa atcttttcgc cttgttaaaa
     8461 tgacaggttc acgaccagtg agttgcgctt tattcacggt atctcttact ttttgaatga
     8521 ttggcagttc cttgtcgagc gcccagttca gcgcgtagcc ataatacggc gtgttgacaa
     8581 tttctgtatc catttcaatc gaatcttgca aaagtagcgc gtaaattttg ccatcttgat
     8641 ttttcgcttg ttcacaaatg actttcgaaa tccgctccct gacaaatgcc gtaatgccat
     8701 caagatcatt cggataaatc gtttgtccat caataatccc ttcgacaatc gttggtaaat
     8761 cgcgaaccga aatcccttct ttcaagagtt gtcgtagcac cccttgaatt agcgaataat
     8821 caatttcttt tttcttaatt tcatcaatta aaatttgatt ttcatcagca agtccgtcaa
     8881 ttaaatcttt aatttgttgg cgcatcagaa gctcatgcaa gttcttccgc agcacaacat
     8941 ccaaatgcgt aattaaaata ctaagcggtt cgagcacttg atagtttttc atctgcgcat
     9001 cttctaactc acccggcaaa atccagtaac catcttcccc gaaaatcgga tccttggtcg
     9061 gctccgcatc aaggtccatc atcacgcctg gtgtttttag cgctaataaa tgtcctgcct
     9121 ttaaaacccc gctcgcaaca gccacacctt tgaccttaat ctcatatttc ccgcgcggct
     9181 gaaaactcgt attatcttta aaattaatcc ccgggacccc aatacctaaa tcttgtaaaa
     9241 ttgattttcg cattaagacg actttatctt ttgccgtttc tccgttcatt ttttgtttca
     9301 cgagagccgc aatgtttaag ccaagttcca caactacagg gaatttttct cgtgctgcgc
     9361 caaatgcttg attgtgttcc gcttcagcag agctggtttc cgactggata agctccattt
     9421 ctttttcaag ttccaattgc tcttttttct ttaaattgaa ttgcgtacga tagccgatta
     9481 ttccaagcac tacgccaatt ccaacaaatg gaatcgttgg tagtgggcta aatacaccca
     9541 ttaagataaa catggcagcg agcgtataaa cgaccaccga gttttgcatt aattctttga
     9601 aaatcccgac cgcaacgtta tcatctgatc cgtcaaatac ccgagttaca ataaccccag
     9661 ctgacatcgc cattaaaagt gaaccaatct ggctcacgat gccatccccg attgttaact
     9721 ccgtatattt caccgcagct tccccgaacg aaagcccacc ttggaccata ccgacaatta
     9781 aaccgaatac aatatttaca actgcaagca aaacggtaaa aagaacatcc ccttttacaa
     9841 atttcccagc tccgtccatc gctccgtaga attcggtttc catattcaaa tatgcgcgtt
     9901 tttctttcgc ttccggctct gtaatcaacc gttgattcaa atccgcatca atcgccattt
     9961 gtttaccggg caaagcatcc agcgtaaatc ttgctgctac ctccgctgtc cgcgaagaac
    10021 catttgccac aataaactga aagacgatta aaataatgaa aataacaatc ccaacaacaa
    10081 aattactacc aataacaaaa ttcccaaatt gtttaattac ttgtcctgga tcaccagtag
    10141 ttaagatcgc ccgtgtcgtc gaaatattta tcgaaacccg aaatatcccc atcaaaagta
    10201 gtaaagacgg aaatgacttt aattcattcc aatctttaat tgatgtggca cgcatgtaaa
    10261 ctaacacaga gaacgccaag atcgtcacaa gcactaaatc caatacaaac ggaggtaatg
    10321 gcacaataag tgcaataaca aacgagaccg caatcaagat agcaaaatat ttttttatag
    10381 cacctaaatt ccccattttg aaacctgcct tttctaagat tagaaaggtc gctcatatgt
    10441 tgttagaact tgattttgtc tgcgtccatc aattctttca tcacttcaat aacatcttta
    10501 tataaatctt cttgtatgta ttcatctgga ttcgtcgtat agtaaatact tcgtgccagt
    10561 tgtctatttg taatcatcgg caccccgtcc gtatccgcca cctgacgaat aaacagtgcc
    10621 agctcgtctt cccctttaac gagcaatttc ggtgcatgat cttttgtttt gtcataacgc
    10681 atcacaacgg aaatatgtgt cgggttgttc accacaaaag tcgcgtccgc catttttttc
    10741 gtaatcgaac cttggagaag cccacgcgca atacttcttt ggcgctgttt cacttccggt
    10801 cgaccttctg aatctttcat ttcgtcctta atttcttgct tcgacatccg caagcctttt
    10861 ttatagtcat aacgctggta aaagaagtca agcagcccta ttactgcgat tacaaggaag
    10921 agcgccagaa attcattttt gaataaagcg aaaatttgtc cgagtgagta aagccaattt
    10981 tgcccggtgt aactaatgag cgtgtctaga tgatcccgaa agccaatata cgccacgtat
    11041 gaaagcaacg taattaaaag tagcgctttc accacctcga caattccctt cacactgaac
    11101 actcgcttaa agtagttcgc tggatttagt cgtttgaact gaggtttcac tgctttcgcg
    11161 gaaaataaaa tcccgacttg cacgccgtag ttcatcaaac caaaaatcac aaccatcacc
    11221 ataatcggca tcaacacttt gccaaactcc atcaagtaaa acaaactgta actttccatg
    11281 ttcgcaagct tcggtggctg tttcaaaaga gcaacaaatg cttgaatcgt gtttttaata
    11341 aacatttctc caaaaaaata aagaagccca gctacaatta gcagtgaaaa agcattattt
    11401 agttctttac ttttcgccac attaccttca tttcgagctt tcttaatgcg gcgtggcgtt
    11461 gctttttccg tcttattatc cttcgccaag cttttttctc ctccctattt tttcagtaaa
    11521 taatcaaaaa acgacacata ttgttgaatc atctcatctg tcaaattttt aaaaactgta
    11581 ctcaagatag gaacagcaca cgcaaggatg aaaatcccaa acgtaatttt tataataaac
    11641 gcattcataa aaatgttaat ttgcggagcg ctcttagaga taaaagcaag aatgatatta
    11701 acgataaaaa tactacccat aatcgggagc gcaatcgaca ccgcggaagc aagtgcaaaa
    11761 ccaagcgtcc caagcagcaa atcaataaac cctttttcaa ataaaatcga caccgaagcc
    11821 gtaaattcaa acgatttcat taaataataa atcaagtaat ccatgccttg aagtgacaaa
    11881 aatatcacta caaagaaagt atctaaaatc gcagcagtaa tcgagttttg tgtcccgtaa
    11941 gaaggatcaa tcaagtttac ttgcgaaaat cctaaatcat aatcaatcat aaaaccagcc
    12001 atttttggaa ttaccgcaat aatttccacc aatttcgcca gcgctaatcc aaaaaccact
    12061 tcagacgtta cccggagtag caaatctggt agcgtcgtta taccagaaac atcgacccct
    12121 gttgccactg gaatggaaat cgccatccca aaaaccactt tgacactgtt cggaatgttt
    12181 cgccctttta aaagcggaaa gaagaataaa aaactggcaa ctcggctgaa aacaatcact
    12241 accgcaagga aaaattcaaa ctccatgttt acaccctaat catcaggggt aatttggaaa
    12301 agattcctac aaacaaatcc gtcatgtgtt caaacatcca cggtccaaga ataaatagcg
    12361 ccactacgaa agcaacaatc ttcggtaaaa acgtcagcga ttggtcttga atttgcatca
    12421 ttgccatcaa tatcgccacc acaatcacta ccacgataca aatgagcgac accggcaaaa
    12481 taagcgccag cccactatag aaaaaatctt gaaaaatttg cgtaatcggc gttaaattca
    12541 ttttgctact cccttaaaag tgaattgttt gaaaaatcat gttggtaatc aatccgtacc
    12601 caccaatgaa aataaaaaca agaatcttaa acggtaagct aatggtcatc ggcggtacca
    12661 tcatcatccc aagatacatc agtaacgtac taacaattaa atctataaaa ataaacgcta
    12721 agtatataaa catcccagtt aaaaaacctt gggtaatctg tgtcaaaata aaagcaggca
    12781 ttaaagccat aagcggagca tcttcttttt ttgtaactgg atcttctcct tctgctttca
    12841 acatcatgtt aatatcatgc ttatatgtat tttccgcgac atattttgtc aaaagcggct
    12901 ttgtttcatc ccatactttt gatgcgctcc actcttcttt ttgcgaaggt ttatacacat
    12961 cgtcatacca agcagtaata agtggttgca tcataaacaa agataaaaac agtgccagtc
    13021 caacaagcac ttggttgggc ggcaagttcg tcgcgccaag cccttgcctc gttaaaccaa
    13081 gaacgataat acagtaagta aagtgtgtga acattaatac aatcgatgca gacaaagaaa
    13141 gaaccgtaac tagtacaaac agcgccacac tagaattaac cccatccgtc ccattcacac
    13201 caagtgagtc cagccaactt tctgcatgca cattcacccc tggccaaaag acaaccaatg
    13261 aaattgcaaa aataacaata aaagatactt gaaatactcg tctagaagct attttacgca
    13321 ttttccttag tctcctcttt caaaagtaat tctcggaaaa gtgcttcatt ttggtcagtt
    13381 tttcctttta atgacaccgt tcgaatatca ttattggaaa taatcgccag caccttttcc
    13441 ccgtctgcct ccagaagaac tgcacgtaac tgatgagaga ttaaaagagt gtctttcaac
    13501 tttataagat cattttcgct ttttctcgtg cgattcgctt gcttgttttt cttaactaaa
    13561 aaataagaaa ttcccgcaag tactgctaaa agtacaataa tttttaaaag tgataaaaaa
    13621 tattccattc aagtaaggta aattcacctt tcactccctt catcagatta caaaaataaa
    13681 tcattttttc aaaatatata tcaataaagt gttttttgta actgcaatat aaaattttac
    13741 accaaatcct gaaaaaatct atactttttt taaaaaatga aattttgtgt aaaaataaaa
    13801 aaacagccag tgtaacagct gtatcaaagg aaaacttctc attattcga
//
LOCUS       DASDYK010000072        13704 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.072, whole genome shotgun sequence.
ACCESSION   DASDYK010000072 DASDYK010000000
VERSION     DASDYK010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13704)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13704)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13704
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.072"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(261..707)
                     /gene="perR"
                     /locus_tag="U0308_001983"
     CDS             complement(261..707)
                     /gene="perR"
                     /locus_tag="U0308_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HEM2316944.1"
                     /translation="MAVSNATLKEAVDVLKKTGVRITPQRHAILEFLINSHTHPTADD
                     IYRALEGNFPNMSVATVYNNLRVFRDAGLIKELSYGDASSRFDFSTSNHYHAICNVCG
                     KIVDFQYPGLDEVEHFAAHMTGYEIDNHRLEVYGICPACKEKQSNN"
     gene            complement(790..1731)
                     /locus_tag="U0308_001984"
     CDS             complement(790..1731)
                     /locus_tag="U0308_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydrogenase"
                     /protein_id="HEM2316945.1"
                     /translation="MNILFTLDVPEHLQTLQAEKFPEDTFYYESNDHFANLAEIDIIV
                     TYGSNITEAKIKQASNLKFIMVFSAGVDSLPREIIQERKIKVANVRGIHAVPMGEYAL
                     SFMLSHVKKATFFYQMQKEKNWASEEPITELAGKTLVVAGTGAIGAKVAEFAQAFDME
                     IIGVNTTGHPVKPFSKTYAMSDIEKVAPLADFFVSVLPHTDKTTAIYSLSFFRKMKDN
                     AVFINIGRGSAVELKVLEQASKEQLINHFYLDVVPEEPLSEDNYLWEASNVTITPHVS
                     GHSDKYLERSFKIWFENIKHLKENTKLRNEIDLNKGY"
     gene            1876..3174
                     /locus_tag="U0308_001985"
     CDS             1876..3174
                     /locus_tag="U0308_001985"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEM2316946.1"
                     /translation="MDHSMSKKLHDEALLHIVGGVNSPSRSNKGVGGGIPVTMERASG
                     AYFYDVDGNKYIDYLAAFGPIITGHAHPHITEAITKAAQNGVLYGTPTKHEITFAKML
                     KEAIPSLEKVRFTNSGTEAVMTTIRVARAYTGRDKIIKFAGCYHGHFDLVLVEAGSGP
                     STLGIPDSAGVTKSTAEEVITVPFNDLASFKEALAVWSDQVAAVLVEPIVGNFGMVAP
                     EDGFLEAVNELAHANGSLVIYDEVITAFRFMYGGAQNYLGVIPDLTAMGKIIGGGLPI
                     GAYGGRIDIMEKVAPLGPAYQAGTHAGNPASILSGIACLEVLQEEGLYERFEKYGSML
                     KDGIEKAALKHGIAVTVNQIVGALTVYFTEDPVTNYAEAGATNGELFGRFFKGMLEEG
                     INLAPSKYEAWFITSAHSEADILETIQAVDTVFGKMVQDN"
     gene            3280..4368
                     /locus_tag="U0308_001986"
     CDS             3280..4368
                     /locus_tag="U0308_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HEM2316947.1"
                     /translation="MKFGARILKTGIAITLALFIAQLCNSPSPSLAGISAVFAIQPSI
                     YRSYRTILERAQGNVIGAIIAIIFGLYIGNDFILIGVASIICVALLMQFRLENTIGLA
                     VVTLIIVMDSPGNDFLEIALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNS
                     EIVRWIKLNLRHAADFPLLKKDMEWMQKQLNQTRNLYGLYREERTFLKKNAISKGRKI
                     AVYRQMLLCSQKGFELLKIQHRYENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYID
                     KVSIDLEYVESHLAQDPQDLMQLFLREMRETEKDEYEDMMDKYHLMRIIASVFAYQET
                     IDYLEKLIHSFKLRHTKENQIDINVNEE"
     gene            complement(4410..4937)
                     /locus_tag="U0308_001987"
     CDS             complement(4410..4937)
                     /locus_tag="U0308_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HEM2316948.1"
                     /translation="MYLPKEKEIIQIKSYKHNGKLHRTWKKTVVLKSTENIIIGGNDH
                     TLVVEADGRKWVTREPSICYFHSDYWFNVISMIREDGIYHYCNLGTPFAVDEQALKYI
                     DYDLDIKVFPDGRFHLLDEGEYEQHRRQMKYPDSIDRILRHNVDVLSHWILDKKGPFS
                     PDYIDIWYEKYKEYR"
     gene            complement(5092..5838)
                     /gene="fabL"
                     /locus_tag="U0308_001988"
     CDS             complement(5092..5838)
                     /gene="fabL"
                     /locus_tag="U0308_001988"
                     /EC_number="1.3.1.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-[acyl-carrier-protein] reductase FabL"
                     /protein_id="HEM2316949.1"
                     /translation="MNRVALVTGSSRGLGREIAIALANEGYDIAVNFSRNRKKAEEVQ
                     QEIEQLGRKCVIFKANVGDVEKIRDLFKAVDEEFGRLDIFINNAASGVLRPLMELEES
                     HWDWTMNINAKALLFAGQEAAKLMQRHQSGKIISLSSIGSIRYLENYTTVGVSKAAVE
                     SLTRYLAVELAPFGIAVNAVSGGLIETDALNHFPNREELLKDAISKTPAGRMIEPNDL
                     VNAVLFLASEKADMIRGQTILVDGGRTLLV"
     gene            complement(5842..6939)
                     /gene="mutY"
                     /locus_tag="U0308_001989"
     CDS             complement(5842..6939)
                     /gene="mutY"
                     /locus_tag="U0308_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEM2316950.1"
                     /translation="MRKMKRLTWDETKITAFQEALVSWYEANKRVLPWRENTDPYRIW
                     VSEIMLQQTKVDTVIPYFNRFMTQFPTMEDFVQADEADILKAWEGLGYYSRVRNLQTA
                     MKQVMADFSGKVPTDLTTILSLKGVGPYTAGAILSIAYNQAEPAVDGNVMRVIARVLE
                     ISEDIMKVSTRKIFEEVLYQLIDKENPAAFNQGLMEIGALVCTPTKPMCMLCPLQPFC
                     EAHKNGVETNYPVKIKKVKTKTKELLSIIVISEDGKIAIEKRPENGLLANMWQFPTIE
                     ISKKENEEVAKLQFLHNYGLDVLLEDEPIAHIKHVFSHLVWKMDIRVAKLQSAIPNEN
                     WYFATEEEMKRLAFPVPYQKMWQAWKDFKGE"
     gene            7139..8119
                     /locus_tag="U0308_001990"
     CDS             7139..8119
                     /locus_tag="U0308_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEM2316951.1"
                     /translation="MDTGTHVVMGIALGALATVDPVVAGSSQAAIGIMTATIIGSQIP
                     DIDTVLKLKNNADYIRNHRGITHSLPMLAIWPLLISSVLYLLFPAATFIHLLLWTFIA
                     VGLHIFVDIFNAYGTQAVRPFKETWVAFGFINTFDWFIFGSHVVAIAAWLLGSPVLAT
                     FVTLYVILALYYVARFVTQRMIKHAVQNLIPDSEEIIIASTIHFFQWRVAVTTKDHYY
                     VGRAFKRNISIYEKFDRLPVPDNEIIRSAKKDKNLAAFISFSKVYNWRIEEKLDGTYV
                     TFTDLRYRSNGHYPFVAVVKLDDDLKIVSSYTGWIFSTEKLYKKLAPVSI"
     gene            complement(8148..8609)
                     /locus_tag="U0308_001991"
     CDS             complement(8148..8609)
                     /locus_tag="U0308_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEM2316952.1"
                     /translation="MKVRGFEVVNEASRKFPEQTISLPIRGDKGSAGYDFFSNETVTI
                     LPGEKHIFWTDIKSYMQEEEVLNIYVRSSIGIKKGLLLCNGTGIIDSSYYSNPGNDGN
                     IGIAIKNFSNEAVAIEAGERVAQGVFQKYLVADTDIVANESRVGGVGSTGR"
     gene            complement(8621..8854)
                     /locus_tag="U0308_001992"
     CDS             complement(8621..8854)
                     /locus_tag="U0308_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhJ family protein"
                     /protein_id="HEM2316953.1"
                     /translation="MYTYLDELTAELMTKNPHLDKEQALWWIEMLWSDFESSYAKAGY
                     PYRGPEYAADYVRQQIERHGSFLHQVERKDPNK"
     gene            complement(8856..9665)
                     /gene="recX"
                     /locus_tag="U0308_001993"
     CDS             complement(8856..9665)
                     /gene="recX"
                     /locus_tag="U0308_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HEM2316954.1"
                     /translation="MKITSISVQQKNKERYNIFIDEKYNFSVDEEVLARYQLMKGKVL
                     TEAEIEEIKQADMVRKGLNKAINFLSHRVRSEKEIRDYLRKQEMEAFAIDEILKKLAD
                     MDYINDLEFAELYTKTQIKTTLKGPRTIERELVEKGLTREIITQVIEEYSDEAQLENA
                     TKQAIKIMKRNNKSAKKMLQQKIITDLIQKGYTSELAKVAATEATSELDVADEAEILQ
                     KQIEKTMRKNKRYKPSIAKQKTITSLMQKGFSYDTIQSYLTENEISFEEEE"
     gene            9763..10665
                     /locus_tag="U0308_001994"
     CDS             9763..10665
                     /locus_tag="U0308_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HEM2316955.1"
                     /translation="MHILLTGATGFIGDHLVHELEKSDHELYILTRQKLKNRANVHYI
                     EWLNEDKLPNLEDLPVDVCINFAGAGLMDEKWTYDRKKVIVNSRIEATSALLSIVKKM
                     KSKPKLWINASAIGAYTSSKSTIYLDTEENNYADNFLGKTVYEWEKTASAASDLGIRV
                     VYARFGLVLGTDGGSFPVFEKLFQTYTGGRFGNGRQWYSWIHVDDVVAAILFIFDHEQ
                     INGVVNFTAPHPVQEKKFAERLGKKMHKPYKTPVPKKIIKFILGERAMTILDSQRAYP
                     EKLMSNHFEFRFETLQEALDDLLD"
     gene            complement(10686..13283)
                     /gene="mprF"
                     /locus_tag="U0308_001995"
     CDS             complement(10686..13283)
                     /gene="mprF"
                     /locus_tag="U0308_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF"
                     /protein_id="HEM2316956.1"
                     /translation="MKEKLMQAYAWFQKNSTVVKIVFITFVMAFVIFEIINIATGIDY
                     PSLKENLTSQSPEQIFIMFIVGLIAVTPMLLYDYVIVKLLPGKFSPSHVIASGWITNT
                     FTNIGGFGGVLGASLRASFYGKNASHKEILLAISKIALFLVSGLSIYCLVSLATLLIP
                     GFANHFVNYWPWLLAGGLYFPILFTITKWKSKSLFVDLPIKRELTLIIASLLEWGFAF
                     GCFAIIGTLMGEPVDIFKVFPLFVIASVIGIASMVPGGVGTFDVVMILGLSQLGVSQE
                     LALAWMLFYRIFYYIIPFVVGLLFFVQKAGKKVNDFLEGLPLLFLQKVAHRFLVIFVY
                     GSGLLLILSSAVPNAIYHVPFLYKIMPFNFLFTSQITIVAFGFLLLGLARGIECKTKK
                     AYIITVIVLGCAIFNTLARVFSMKQAIFLGIVLLCLFLARNEFYREKLVYTWSKVIMD
                     SIIFIVCLAGYIVIGIYNSPNIKHSKEIPDYLRIASEHLWLVGFVGVFIAVVSLVIIY
                     IYLSTTKEKLGSPFEAVKVREHLAKWGGNEVSHTMFLRDKLLFWAANGEVLFSYRILA
                     DKMVIMGEPTGNMDKMEAAIEEVMMNADRFGYRPVFYEVRGTMIPYLHDHGFDFIKLG
                     EEGFVDVQNFTMSGKKKKGERALMNKLEREGYTFEIIEPPFKHETWTTLRAVSDEWLD
                     GREEKGFSLGFFDTYYLEQAPIAIAKNGEGTVVGFASMMPSYTEEMTSIDLMRYSKEA
                     PSGIMDFLFINLFEKAKEDGFQTFNAGMAPLANVGESKYAFLGERLAGLVYRYSQGFY
                     GFKGLRNFKSKYVTEWEQKFVAFRKRSSIAFTMLQLMILVGKKRPLANSQVVLDFPLE
                     EETKKPDSE"
     gene            complement(13310..>13704)
                     /locus_tag="U0308_001996"
     CDS             complement(13310..>13704)
                     /locus_tag="U0308_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEM2316957.1"
                     /translation="GNFHIQKEMINLIPFTTIENTFQQTLPTMPTIIQILGNVLLLCP
                     LSFFMLYFKITSTAGKTLLVIFLTSCGIELLQFAQTTMITGFESISLPPKRSTDIDDI
                     ILNTLSGLIGILLAYAVPSVRKRINKRR"
BASE COUNT         4111 a         2594 c         2450 g         4549 t
ORIGIN      
        1 gtcgctttca tgcttgttat gcgaatgttt tcgtttgttt tttgcgactt ttaaatcata
       61 tcatttcagc aactatctgt caacaacttt ttgaatttat tttatgaata aaattcattt
      121 aaatcgctgc tatcgtagcg ccgaaaacta atatatcaag ttttgagata tatgtcaacc
      181 gaattatgca taaaattaaa taaaaatgaa aaaaattgca aaaaacacaa aaaaacacct
      241 agctaggcta agtgttttga ttaattattt gattgttttt ctttacaggc tggacatata
      301 ccatatactt ccagtctgtg attatctatt tcatatccgg tcatatgtgc tgcgaaatgt
      361 tctacttcat ctaaacctgg atattgaaaa tcaactattt ttccacacac attacaaatt
      421 gcgtggtaat gattagatgt agaaaaatca aatcgactag atgcatcgcc ataggataat
      481 tctttaatta gaccagcatc ccggaaaacg cgtaaattat tatatacagt tgctacgctc
      541 atgttaggga agtttccttc taaagcccga taaatatcat ccgcggttgg gtgtgtatgt
      601 gagttaatta agaattcaag tatagcatga cgctgaggag tgattcttac tcctgttttc
      661 tttaagacat ctactgcctc ttttagagtt gcattagaca ccgccatgca ctcccttcca
      721 aaaataatta ttatctttat aataccggaa ataacgctta actgtcaata gaatggcaga
      781 atttatagct taataacctt tattcaaatc aatttcattc cgtaatttgg tattttcttt
      841 tagatgtttg atattttcaa accaaatctt aaagctacgt tctaaatatt tatccgaatg
      901 tccagataca tgaggtgtga tagtaacgtt acttgcttcc cataaataat tgtcttcgga
      961 aagtggctct tcaggtacaa catctaaata aaaatggttt attaattgct cttttgatgc
     1021 ttgttctaaa acctttaatt caactgcgct acctcttcct atattgataa aaactgcatt
     1081 atctttcatt ttccggaaaa atgataagga ataaatagct gttgttttgt ctgtatgagg
     1141 taaaacacta acaaaaaaat ctgctaatgg agccactttt tcgatatcgg acatggcata
     1201 tgttttacta aagggcttca caggatgtcc agttgtatta acacctataa tttccatatc
     1261 aaatgcttga gcgaactcgg ccacttttgc tccaatggct ccagttccag ctactaccaa
     1321 agtttttcca gctaactctg ttattggttc ttcacttgcc caattttttt ctttttgcat
     1381 ttgatagaag aaagtggctt tttttacgtg tgataacatg aaagatagcg cgtattctcc
     1441 cattggcaca gcgtggattc cgcgtacatt agcaacttta atttttcttt cttgaattat
     1501 ttccctcggc aaactatcta ctcccgcaga aaaaaccatg ataaatttta aattgcttgc
     1561 ttgtttaatt ttggcttcag taatgttaga tccgtatgtg acgatgatat ctatctccgc
     1621 taaattggca aaatgatcat tgctctcata ataaaaagta tcctctggaa atttctctgc
     1681 ttgcaaagtc tgtaaatgtt ctgggacatc taatgtaaat aaaatgttca ttttgcgcca
     1741 cacttcctct ctttagctat atactaattt tatgcttttt ttcatttaac ggcaattaaa
     1801 ttgttttttc gattgcggca tcttattttt tcgcatagaa tataagaggt attaaaattt
     1861 tgaggagatg acgaaatgga tcattcaatg tcaaaaaaat tgcatgatga agcactttta
     1921 catatagttg gcggggttaa tagcccatct aggtcaaata aaggggttgg cggcggaatt
     1981 cctgtaacaa tggaacgggc tagcggcgct tatttttatg atgtggatgg gaataagtat
     2041 attgactact tagctgcgtt tggaccaatc attactggac atgcacatcc tcatattaca
     2101 gaagcaatta caaaagctgc gcaaaatggt gttttgtacg gaacacctac taaacacgaa
     2161 atcacttttg cgaaaatgtt aaaagaggcc attccttcac ttgagaaggt ccgttttaca
     2221 aattccggga cggaagctgt tatgacaacg attcgtgtcg ctcgcgctta tacaggcaga
     2281 gataaaatca ttaaattcgc tgggtgttac cacggccact ttgatttagt actcgtggaa
     2341 gctggttctg gaccttctac gcttggcatt ccagactccg ctggggtaac gaaatcaacc
     2401 gcagaagaag ttattactgt accttttaat gaccttgcat cgtttaaaga ggcattagct
     2461 gtttggagcg atcaagttgc tgctgtttta gtagaaccta ttgttgggaa ttttggaatg
     2521 gttgcgccag aagatggttt tttagaagct gttaatgaac tcgcacatgc caatggttct
     2581 ttagtaattt atgatgaagt tattacggct ttccgtttta tgtacggcgg cgcgcagaac
     2641 tatttaggtg ttattccaga tttgactgct atgggtaaaa ttattggtgg cgggcttccg
     2701 attggtgctt acggtggtcg gattgatatc atggaaaaag tagcaccact cggaccggct
     2761 tatcaggctg ggacgcatgc ggggaatccg gcatctattc tttcaggaat tgcttgtctc
     2821 gaagttttac aagaagaagg actgtatgag cgctttgaaa aatatggctc gatgctgaaa
     2881 gatggcattg aaaaagccgc gctaaaacac ggcattgctg ttacggttaa ccaaattgtc
     2941 ggtgctctaa ctgtttactt tacggaagat cctgtgacta attatgctga ggctggcgct
     3001 acaaatggcg agttattcgg tcgtttcttt aaaggaatgc tagaggaagg cattaatttg
     3061 gcgccttcta aatatgaagc atggttcatc acttccgcac actcggaagc tgatatttta
     3121 gaaacaatcc aagcagttga tactgttttt ggaaaaatgg ttcaagataa ctaggtaata
     3181 ttactttata aactggtgag aaacgttata atagaagaag aatgagcggg aaaacttaaa
     3241 aatcccgctc aaatagtcta tagaaaggaa taaccttcca tgaaattcgg agctagaatt
     3301 ttgaaaactg gtattgcaat cacattggcg ctttttatcg ctcaactttg caattcacct
     3361 tctccatctc tggcaggcat ttccgccgtt tttgctatcc aaccttctat ttataggtcc
     3421 tatcgaacta ttttagaacg ggcgcaaggg aacgtaattg gagccatcat tgcaattatt
     3481 tttggacttt atattggtaa tgattttatt ttaattggtg tcgcttcgat tatctgtgtt
     3541 gctttattaa tgcaattccg cttggagaat acgattggcc ttgcagtcgt gacactcatt
     3601 attgtaatgg attctcctgg taatgacttt ttagaaatcg cacttattcg ttttgggaca
     3661 attatgttag gtttacttgc ggcatttatt gtcaatctat tctttttacc accgaaatat
     3721 gaagtttcat tgtttcagtt aatttataat acgaatagtg aaatcgttcg ttggattaaa
     3781 ttaaacttgc gtcatgctgc ggacttccct cttctaaaaa aagatatgga gtggatgcaa
     3841 aaacagttaa atcaaacgcg taacttatat ggtttataca gagaagagcg tactttttta
     3901 aagaaaaatg ccatttcaaa agggcggaaa attgctgtat ataggcaaat gttgctttgt
     3961 tctcaaaaag gttttgagct tttaaaaatc caacatcgct atgaaaatga ttatttgcaa
     4021 ctgcctccag ataagcaaga gttaatcaga caacatatcg attacttaac ggataaacat
     4081 gaacaacttt tactgacata catcgataaa gtttcgattg atcttgaata tgtagagtcg
     4141 catttagcac aggatcccca agatttgatg cagcttttct tgcgtgagat gagggaaaca
     4201 gaaaaagatg agtatgagga tatgatggat aaataccatt taatgcgtat tattgcctct
     4261 gtttttgctt accaagagac aatcgactat ttagaaaaat taattcatag ttttaaactc
     4321 agacacacga aagaaaacca aattgatatt aatgtcaatg aagaataaac aaaaaacgag
     4381 cttggagata gactccaaag ctcgtttttt taacggtatt ctttgtactt ttcataccaa
     4441 atgtcaatgt agtcagggga aaacggacct tttttgtcca aaatccagtg gcttaacaca
     4501 tccacattat gtcgaagtat ccggtcaatt gagtctgggt acttcatttg gcgacggtgt
     4561 tgttcgtatt cgccctcatc aagcaaatga aaccttccat ctgggaaaac cttaatatcg
     4621 aggtcatagt caatgtactt aagcgcttgt tcatctactg caaatggtgt ccctagattg
     4681 cagtaatgat aaatgccgtc ttctctaatc atggaaatta cattaaacca gtaatcacta
     4741 tgaaaatagc agatagatgg ttcgcgcgtt acccatttac gtccgtctgc ttccacaact
     4801 aatgtgtggt cgtttccgcc gataataata ttctccgtag atttaagcac cactgtcttt
     4861 ttccaagtac gatgaagttt tccgttatgt ttgtagctct tgatttgtat tatttctttc
     4921 tctttgggta agtacatcct ttatcctact ttcctcatgt actatcaaaa tcattattat
     4981 tataacataa ggcaagactg caaaaaaaca atatcgtgct gaaacggaat attttcctca
     5041 aaaaagaact ttttttacat aaaatagcta atttttacct attttgtttt actatactaa
     5101 aagtgttctg ccgccatcta ctaaaatagt ttgcccgcga atcatatctg ctttttcgct
     5161 cgcaaggaat aatacggcat ttactaagtc attgggctca atcattcgac ccgctggtgt
     5221 tttacttata gcatctttta acaattcttc acgattggga aagtgattta gtgcgtctgt
     5281 ttcaattaag ccgccagaaa cagcattaac tgcaatgcca aaaggtgcaa gttcaactgc
     5341 taaataccga gtaagtgatt ctaccgccgc ttttgaaacg ccaactgttg tgtaattttc
     5401 taaataacga atcgagccaa tcgagcttaa gctgatgatt ttcccgcttt gatggcgttg
     5461 cattaattta gctgcttctt gacctgcaaa caacagcgct tttgcgttaa tattcattgt
     5521 ccaatcccaa tgtgattcct ctaactccat caatggtcga aggacaccac ttgctgcatt
     5581 gttaataaaa atatctaatc ggccgaattc ctcatctaca gctttaaata agtctctaat
     5641 tttttccacg tcaccaacat ttgctttaaa aataacgcat tttcttccta attgttcaat
     5701 ttcttgttgt acttcttctg cttttttgcg atttctggaa aaattaacag cgatatcata
     5761 gccttcattt gcaagtgcga tggctatttc tcttccaagt cctctactac ttcctgttac
     5821 taatgccact ctattcattt gttattcccc cttaaaatct ttccacgctt gccacatttt
     5881 ttgatatggt actggaaaag caagtcgctt catttcttct tctgttgcaa aataccaatt
     5941 ttcatttgga attgctgact gaagttttgc cacacgaatg tccattttcc atactaaatg
     6001 agaaaaaacg tgtttgatat gcgcaattgg ttcgtcttct agtaaaacgt ctaagccata
     6061 attatgtaaa aattgtagtt tagctacttc ctcattttct tttttcgaaa tttcaatagt
     6121 aggaaattgc cacatatttg caagcaaacc attttctggt cgtttctcta tggcaatttt
     6181 tccgtcctct gaaataacaa tgatgcttaa tagttctttg gttttcgttt tcactttttt
     6241 tatttttact ggataattcg tttcaacgcc atttttatgc gcttcgcaaa acggttggag
     6301 cggacaaagc atacacattg gttttgttgg tgtacaaaca agcgcaccaa tttccattaa
     6361 accttggttg aaagcggctg gattttcttt gtcaattagt tgatataaca cttcttcaaa
     6421 aattttccgg gtggacactt tcatgatgtc ttcactaatt tctaaaacgc gcgcgatgac
     6481 acgcataaca ttgccatcca ctgctggttc agcttggttg taggcaatac tcaagatagc
     6541 tcccgctgta tatggaccta cacctttaag cgataaaata gtggttaagt cggtaggaac
     6601 ttttccagaa aaatcggcca tcacttgctt catggctgtt tggaggtttc tgacacgaga
     6661 ataatagcct aagccttccc acgcttttaa aatatccgct tcatccgctt ggacaaaatc
     6721 ttccatcgtc ggaaattgag tcataaagcg attaaaataa ggaattactg tgtcgacttt
     6781 tgtttgttga agcatgattt ctgagaccca aattctgtaa ggatcggtat tttcgcgcca
     6841 cggtaagacg cgcttattcg cttcatacca ggaaacgagt gcttcttgaa aagcagttat
     6901 ctttgtttca tcccaagtta gtctcttcat ttttctcatt ttcccctcgt aattctaata
     6961 gatttctaat gtgtgttgct ccggatgtgt agtataatgt agacagggaa taaaatagta
     7021 tacccattct taagccgatt tctattatac cgaatgctgg cttgattgaa tagtgttgtg
     7081 ctcttacagg cagcaccact tgtatttttt aagaccgatt ttagaggagg caaagtcatt
     7141 ggatactggc acacatgtag taatgggaat tgcactcgga gcgttagcaa ccgtagaccc
     7201 ggtagttgcc ggaagttctc aagctgccat tggtattatg acagcaacaa ttattggttc
     7261 acaaattcca gatattgaca ctgtactaaa attaaaaaac aacgctgatt atattagaaa
     7321 tcaccgagga ataacacatt ccttgccgat gcttgcaatt tggccattac ttatttcatc
     7381 tgttttgtat ttacttttcc cagcagcaac atttattcat ttactgttat ggacgtttat
     7441 cgcggtggga ttacacattt ttgtagatat ttttaatgct tacgggacac aagcagtcag
     7501 accgtttaaa gaaacatggg tcgcatttgg atttatcaat acctttgatt ggttcatttt
     7561 cggttctcat gttgtggcta ttgcggcttg gttgttaggt tctcctgtat tagctacatt
     7621 tgtaacactc tacgtcattt tagcacttta ttatgtggcg agatttgtta cacaacgaat
     7681 gattaaacat gcggttcaaa acttaattcc agattcagaa gaaatcatta ttgcttccac
     7741 catccacttc ttccagtggc gtgtggcggt aacaaccaaa gatcattact atgtaggtcg
     7801 agctttcaaa cgcaacatct ctatctacga aaaatttgac cgattacctg ttcctgataa
     7861 tgaaatcatc cgttctgcga aaaaagataa aaatctagct gcttttatct cattctccaa
     7921 agtttacaac tggcgcattg aggaaaagct agatgggact tatgtaacat ttaccgattt
     7981 acgttatcgt agcaatggac attatccatt tgtagcagtg gtgaaattag atgatgattt
     8041 aaaaattgtt tcatcttaca ctggttggat tttctccaca gaaaaattat acaaaaaact
     8101 agcacctgtt agtatttaaa aaaagacccg gaatcccggg tcttttttta tctgcctgta
     8161 cttcctaccc caccaacacg ggattcgttt gcgacaatat ctgtatctgc aactaagtat
     8221 ttttgaaata cgccttgagc aacacgttcc cccgcttcaa tagctactgc ttcattggag
     8281 aagtttttaa tggcaatccc aatattgcca tcattacctg gattactata ataagaagaa
     8341 tcaataattc ctgtaccgtt acatagaagt aaacctttct ttataccaat ggaagaacgg
     8401 acatagatat tcaaaacctc ctcttcctgc atataacttt taatatctgt ccaaaaaatg
     8461 tgtttttctc ctggtaagat ggttactgtt tcattagaga agaaatcata gccggccgaa
     8521 cctttgtccc cgcgtattgg taaagatatt gtttgttccg gaaattttct gcttgcttca
     8581 tttactactt caaatcctct tactttcaat tcgttcactc ctatttgttt gggtcttttc
     8641 gttctacttg gtgtaaaaaa ctgccgtggc gctcgatttg ctgacggaca taatctgccg
     8701 cgtactctgg accacgatac gggtaacctg ctttagcata tgaactttca aaatctgacc
     8761 aaagcatttc aatccaccac aaggcttgct ctttatctaa atgcggattt ttagtcatta
     8821 attccgctgt tagttcatct aaatacgtat acaattcact cttcctcctc gaaactgatt
     8881 tcattttcag ttaggtatga ttgaattgta tcataagaaa aacctttctg cattagcgat
     8941 gtgattgttt tttgtttggc aatgcttggt ttgtagcgtt tatttttacg cattgttttt
     9001 tcgatttgct tttgtaaaat ttctgcttcg tccgccacat ccaattcgct cgttgcttca
     9061 gtagcggcta ctttggctag ttcgctcgta tagccttttt ggattaaatc cgtgataatt
     9121 ttttgttgaa gcattttttt ggcgcttttg ttatttcgct tcataatttt tattgcttgt
     9181 ttggtggcat tttctagctg agcttcatcc gaatattctt cgataacttg agtaattatt
     9241 tctctagtta gtcctttttc gactagttcg cgttcaatgg tccgcggacc ttttagggtt
     9301 gttttgattt gcgttttcgt atacagttcc gcaaattcga gatcattaat ataatccatg
     9361 tcggctaatt tttttaaaat ctcgtcaatt gcaaaagctt ccatttcttg ctttcttaaa
     9421 taatcgcgaa tttctttttc cgagcgaaca cggtgggata agaagttgat ggctttattt
     9481 agcccttttc gaaccatatc agcttgctta atttcttcta tttcggcctc ggttagaact
     9541 ttacctttca tcagctggta gcgggctaaa acctcttcgt ctacgctaaa gttgtatttt
     9601 tcatcaataa aaatgttgta gcgttctttg tttttctgct ggacacttat ggacgtgatt
     9661 ttcataatcc gcctccttct cctatctatc ataccgcaaa aattggtttt aatactacta
     9721 aaaagggaat aaactagtta ggacaatgaa gaggtgataa aattgcatat cttacttaca
     9781 ggcgcaacag gttttattgg tgatcattta gtgcatgaat tagaaaaatc tgatcacgag
     9841 ctttatattt taacaagaca aaagctaaaa aaccgcgcaa atgtacacta tattgaatgg
     9901 ttaaatgaag ataaattgcc gaatttagaa gatttaccag tggatgtttg tattaatttt
     9961 gctggtgctg gtttgatgga tgaaaaatgg acttacgata gaaagaaagt gattgtaaat
    10021 agccgcatcg aagctacttc agcactctta tcgattgtga aaaaaatgaa atcaaaacca
    10081 aaattgtgga ttaatgcaag tgcaattgga gcctacactt cctccaagtc aacgatttat
    10141 ctcgatacag aagaaaataa ttacgcagat aacttcttag gaaaaacagt ctatgaatgg
    10201 gaaaaaacag cgagtgcggc aagtgatttg ggtattcgtg ttgtttatgc tcgctttggt
    10261 cttgtacttg ggactgatgg tggctcgttc cctgttttcg aaaaattatt ccaaacttat
    10321 acagggggac gctttggtaa cggcagacaa tggtattctt ggattcatgt ggatgatgtt
    10381 gtggcggcaa tcttatttat ttttgaccac gaacaaataa acggtgttgt taattttaca
    10441 gcccctcatc ctgttcaaga aaagaaattt gctgaacgcc ttggaaaaaa aatgcataaa
    10501 ccgtataaaa ctcctgtgcc taaaaaaatt attaaattca ttctaggtga acgtgccatg
    10561 actattttgg acagtcaacg tgcttatccg gaaaaactga tgagtaacca ttttgaattt
    10621 cgctttgaaa cgttacaaga agctttagat gacttattag attgataaaa aaccagattc
    10681 tgattttact cagaatctgg tttttttgtt tcttcttcaa gcgggaaatc aaggactact
    10741 tgactatttg caagtggtct ttttttacca acaagaatca ttaattgtaa catggtgaaa
    10801 gcaatagaac ttctttttct aaaggcaaca aatttttgtt cccattctgt aacatatttg
    10861 gatttaaaat tacgcagtcc tttgaagccg taaaaacctt gactatagcg gtataccagt
    10921 ccggctaatc gttcacctag gaaagcatat ttactttctc caacattggc aagcggcgcc
    10981 ataccggcat taaatgtttg gaagccgtct tctttagctt tttcgaatag attaatgaaa
    11041 aggaaatcca taatacctga tggtgcttct ttagagtatc gcattaggtc aatcgaagtc
    11101 atctcttctg tatatgacgg catcatcgaa gcaaatccaa cgacagtacc ttctccgttt
    11161 ttagcgatag caatcggagc ttgttcgaga taatacgtat cgaaaaatcc taatgagaaa
    11221 cctttttctt ctcttccatc tagccactca tcagaaactg ctcgtaaagt tgtccaagtc
    11281 tcgtgcttga atggtggttc tattatttca aaagtataac cttctcgttc taatttattc
    11341 atgagagcac gctcaccttt tttcttttta ccactcattg taaagttttg aacgtcgaca
    11401 aaaccttcct ctccaagctt gataaagtca aatccgtgat catgtaaata tggaatcatc
    11461 gtgcctcgaa cttcatagaa aacaggtcga tagccaaatc tgtcagcgtt catcataacc
    11521 tcttcaatcg ctgcttccat tttgtccata ttcccagttg gttcgcccat gatgaccatt
    11581 ttgtccgcca agattcggta agagaaaagt acttctccat tagccgccca aaaaagtagt
    11641 ttatctcgta agaacatcgt atgactgact tcatttccgc cccatttcgc taaatgttca
    11701 cgtactttga cagcttcaaa tggagaacct aatttttctt ttgttgtgga taaataaata
    11761 taaataatga ctaaactaac aacagcaata aatacgccaa caaaaccaac taaccataaa
    11821 tgttctgagg caatgcgtaa atagtcagga atttctttgg aatgtttgat atttggtgag
    11881 ttgtaaatac caataacaat gtaacctgct agacatacga tgaaaataat gctatccata
    11941 attactttac tccatgtata aactagtttt tctcggtaaa attcgtttcg agctaagaat
    12001 aaacataata gcacaattcc taaaaagatc gcctgcttca tcgaaaatac gcgagcaagt
    12061 gtgttgaaaa tcgcgcaacc tagaacaatt actgtaataa tatacgcttt ctttgtttta
    12121 cattcaattc ctctcgcaag tcccagtagt aaaaagccaa atgcaacgat ggtaatttgg
    12181 gaagtgaata agaaattaaa cggcataatt ttgtataaga aaggcacatg gtaaatggcg
    12241 tttggaacgg cggaagataa aatcaacaat aatccggaac cgtaaacaaa aataactaag
    12301 aagcgatgag ccactttttg taaaaataat agcggtaacc cttcaagaaa gtcatttact
    12361 tttttaccag ctttttggac gaagaaaagt aatcccacta caaagggaat aatatagtag
    12421 aaaattcggt aaaatagcat ccaagcgagc gctaattctt gagaaacgcc taattggcta
    12481 agtcccagaa tcatcacgac gtcaaatgtc cctactccac caggtaccat cgaagcaatc
    12541 ccaattaccg aagcgataac aaataatggg aacactttga agatatcgac tggttctccc
    12601 atcaatgtac caataatcgc gaaacatcca aaagcgaagc cccactccaa aagagaggcg
    12661 ataattaacg ttaattctct tttgataggt aaatcaacaa aaagtgactt acttttccat
    12721 ttcgttattg taaataagat tgggaagtaa agaccacccg caagaagcca tggccagtaa
    12781 ttaacaaaat gatttgcaaa tcctggaatg agtaaagtgg ctaatgatac taaacagtaa
    12841 atcgataaac cagatactaa aaataaagca atcttagaaa tagcgagtaa tatttcttta
    12901 tgagatgcat tttttccgta aaaacttgct cttaaactgg cacctaatac gccaccaaaa
    12961 ccaccaatat tagtaaatgt attcgtaatc caaccagagg caatcacatg acttggggaa
    13021 aactttccag gcaacaactt aacgatgaca taatcataca atagcattgg agtgacagca
    13081 attaagccaa caataaacat aataaatatt tgttctggac tttgagaagt taaattttct
    13141 tttagcgatg gatagtcaat tcccgtcgca atattaataa tttcaaaaat aacaaaagcc
    13201 atcacaaaag taataaaaac gatttttacg acggtactat ttttttgaaa ccaggcatag
    13261 gcttgcatta atttttcttt cataacagag tctccttaac gatttccatt catcttcttt
    13321 tattgattcg ttttctaaca gatggtacag cataagctag tagaatgcct attaatccac
    13381 ttaacgtatt taaaatgata tcatctatat ctgtagaacg ttttggtggt agcgatatac
    13441 tttcaaatcc tgtaatcatc gttgtttgcg caaattgaag tagttcgatg ccgcaagatg
    13501 ttaagaatat gactaataat gtttttcccg cagtgcttgt tattttaaag taaagcatga
    13561 agaaagacag tggacataac aataaaacat tccctaaaat ttgaataata gtaggcatcg
    13621 ttggtaatgt ttgctgaaat gtattttcta tggtggtaaa aggtattaag ttaatcattt
    13681 ctttttgaat atggaaattc ccag
//
LOCUS       DASDYK010000073        13613 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.073, whole genome shotgun sequence.
ACCESSION   DASDYK010000073 DASDYK010000000
VERSION     DASDYK010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13613)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13613)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13613
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.073"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..781
                     /locus_tag="U0308_001997"
     CDS             <1..781
                     /locus_tag="U0308_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM2316958.1"
                     /translation="QISQLVDSLVKLYNNPSDNTIVKWIVGFLKESNIQKYLQAGVDF
                     IIASLSGIGSVGLSFFLALILSLFFSLEKERVTSFTGQFMTSKVGFIFKEAAFFGKKF
                     VSTFGVVLEAQLMIALVNTFITTIALYLMDFPQLLSLSIMVFVLGLIPVAGVIISCIP
                     LVLIAYSVGGFQDVVYILITVVIVHAIETYILNPKLMSSKTNLPVFYTFIILIFSETF
                     FGVWGLIVGIPVFVFLLDILEVRNAEDLKKRTIFGRKKKVD"
     gene            complement(791..1690)
                     /locus_tag="U0308_001998"
     CDS             complement(791..1690)
                     /locus_tag="U0308_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2316959.1"
                     /translation="MKKVISLIIALAIIITGFWIIFLQFEPTKKEAKEPAVTANKTTK
                     KEQKPVSEIAIPTLFVHGYSGTINSFGGMINRLAEDGDVTKSLVMNVAADGTVSSDGN
                     YDKFSHNPTIQVIFEDNKSSAANQTQWIQNVMKELKNNYHIEKVYAVGHSMGGVSLTS
                     YIEKVGSDKTYPVLEKLVLIGAPLNGLVIGDDGVTAYDLTDSGPKKSSDRYSEFMKNK
                     QKIPTNLHVLNIAGDTLNGTKSDGSVSVASALSGKFIFEGQAASYEEKTFTGKNAAHS
                     KLHENTDVDAEVADFLWGIEKVD"
     gene            complement(1711..2532)
                     /locus_tag="U0308_001999"
     CDS             complement(1711..2532)
                     /locus_tag="U0308_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2316960.1"
                     /translation="MLKRVFFSIILPLGCLVGAIFILLTINTTYPKAANESIPTIFIH
                     GYRGTDRSLHGMIRRFDQKYDWGTESLTVNVSPDGKISTTGTYNKKEKNPLINIVFED
                     NRATLPQQSMWTKKVMSYLQQNYAIKKFNAVGHSMGGGAWVSYLASYEKNKSYPQVNK
                     IVFLAVPFYPEEYVNGDQQVDIKNANNVHAKFAEKMAKVLPNNTEIMIIGGNLEDGSN
                     SDGEVKLDSVLYGEKLFAHQKVTTHVIKGPQATHSSMHESTVVDKYVGQFLWGEK"
     gene            2690..3148
                     /locus_tag="U0308_002000"
     CDS             2690..3148
                     /locus_tag="U0308_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HEM2316961.1"
                     /translation="MIKRTGEIVLAIIGLVLSILAQAFIAIIGLLMISGSKGKEGLTT
                     FYNNYYKTMNEWEIPKKEIPDPDRVLDFVQTLSWTALTGGLITLALGIFGIYYIFKNK
                     KPVFAGYLFLAAGVVSLLSTALISFIPALLFIVVAILCFVRKPKSTFSGL"
     gene            3242..3475
                     /locus_tag="U0308_002001"
     CDS             3242..3475
                     /locus_tag="U0308_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316962.1"
                     /translation="MKNKVGIIAGAVGAVAGVLACAVVYVVKKQQPPTPFDEVNDIRT
                     RYADKEISETELEENNMISEGGVSSLQYEEKVK"
     gene            3703..4017
                     /locus_tag="U0308_002002"
     CDS             3703..4017
                     /locus_tag="U0308_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316963.1"
                     /translation="MRAILIGVLIILLIAMILIVLLPAILATIGAVLGFWSLKKLLEA
                     RSVGEKVIYGILIGVGALIILANLKGILVVVIIGAIIYFLTRNKNKPRKNDDVFDYPY
                     NK"
     gene            4033..4878
                     /locus_tag="U0308_002003"
     CDS             4033..4878
                     /locus_tag="U0308_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HEM2316964.1"
                     /translation="MANLFEKMKQWNKEVSEKIEKREEKRRNSVSYYMDKTKQEMKDA
                     ERMVEKQRELKSLFYKEYKEMEVYVEKRRHQAEIAKEAGETKLANFALEEVAQYEEQL
                     EATKAHYDQASEQLEKLELRMHEMRLKWKNLKTQHLAEMAEKNATETSEKMDKVIHDM
                     SWGSVSDYHEAQKQRDLAEEAEKKADMSKELSQSFDDLMDELEKKTKKSKEIIKDKAQ
                     NFTTMVDEIIEREKQNFKKPEKASMEDQLNELEKEAAKEKPKEEKEVLIPELEKKEEE
                     NETDK"
     gene            5067..6200
                     /gene="nagA"
                     /locus_tag="U0308_002004"
     CDS             5067..6200
                     /gene="nagA"
                     /locus_tag="U0308_002004"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HEM2316965.1"
                     /translation="MTNKVITNATIYTGKGVLENAFVRFDKQILEVGSMADFQADKAE
                     EVIDAKGQKLVPGFIDVHSHGGYSFDAMDADPEALRKQVNGMLNEGITTYFPTTMTQS
                     HENIEKALKVINEVAQTEPVIGGIHLEGPFVSKVFKGAQPEEYIQAPDLELFKKWFDI
                     SGGLIKLVTYAPEHDTSADFENLCFELGVVPSIGHSNDVREHLKTSKATHATHLYNAC
                     HRMTHREPGVPGHVLLERGINAELIVDGIHVHPDMVKLAYQMKGPEHLCIITDSMRAK
                     GMPEGKSELGGQTVIVKDKQARLEDGTLAGSVLTYDDGFRNMIKFTGCSVEEAVLMSS
                     GNQAREFNLTQKGAIEAGKDADFNLLDEDLHITATYSFGKKHS"
     gene            6216..6920
                     /locus_tag="U0308_002005"
     CDS             6216..6920
                     /locus_tag="U0308_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HEM2316966.1"
                     /translation="MQLITTENKLAGSKKALEIIEKGITSGEVNTLGLATGSTPETLY
                     AELVKSDVDTKNVTTTNLDEYVGLAANDPNSYHYYMNELLFSKKAFKESFLPNGEATD
                     AEAECARYEEILSEHPIDIQVLGIGTNGHIGFNEPGTPFDSLTHKVVLTDSTREANKR
                     FFEREEDVPTHAYSMGIKSIMNAKKIILLAFGENKAQAIKETIKGPVDVNCPASVLQN
                     HPDVTVILDNEAASLL"
     gene            6936..7658
                     /locus_tag="U0308_002006"
     CDS             6936..7658
                     /locus_tag="U0308_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2316967.1"
                     /translation="MIDKQSGIPIYIQIQSEIKKKMEDGVWKVGTSIPAERQLAEMFH
                     VSRMTVRQAIQGLVDDNILQRRVGAGTFIAEKKLTERLEAVTSFTNLMLQEGKVPSTR
                     IVSYGIRPASTQEQEALQLPENSNVMKIERIRYGDRVPILYEVAAIPEKIASLLTKED
                     IMDSLYKAIELKLGQPIGEAEQIMEASLVSEKIAPYLDVKLGSPVMKLRQITTLEDGR
                     PFEFTRSQYVGSRFQFVARIKQ"
     gene            7778..8833
                     /locus_tag="U0308_002007"
     CDS             7778..8833
                     /locus_tag="U0308_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl/decaprenyl-phosphate
                     alpha-N-acetylglucosaminyl 1-phosphate transferase"
                     /protein_id="HEM2316968.1"
                     /translation="MSWMIILICFGASVLLTPLIRKIALYFDITDKPDQRRINIKPIP
                     SLGGLAMFISFTIGMFLLPIENEFLWPLLIAAFVMVLTGLLDDIMEFKARYKLIGQVT
                     AAFIIVFWGNISIDFINLPFGGEIHFGVLSIPLTIIWIVAITNAINLIDGLDGLAAGV
                     STIALLTILGMAFIMGDALVIMIASVLIAGTLGFLPYNFNPAKIFMGDTGALFLGFII
                     SVLSVMGFKNVTFISLIVPILILGVPISDTLFAIIRRMVTKQPIAMADKSHLHHCLLR
                     LGFTHRQTVILIYAIAALFSLFAFIFTMSTLWGSMILIGVLLILIEVLIETLGLVGST
                     YRPLLNLFKLTKEEKID"
     gene            8947..9855
                     /locus_tag="U0308_002008"
     CDS             8947..9855
                     /locus_tag="U0308_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HEM2316969.1"
                     /translation="MEIIATADSMKQAEQLLRAGVDRLYVGNSQFGLRLPHSFSVEEL
                     REIVHLAHQEGKKVTVAVNSLMHNEHMEELPGFLEHLADMKVDAVTCGDPGAIMLLSE
                     MAQPIPFIYDAQTFVTSAEQISFWEKQGAIGAVLARELTEGEIKAIASSLTIPVEVLV
                     YGPTCIHQSKRKLVTNYERIVELEDDTSKERGLYLREPNDETSQLPIYEDESGTHIFA
                     SEDVSLVPYLADLYEAGLKTWKLDGVLAESENFVQIASLLVEAKEAVMKGQFVAEYFV
                     NKLTELQPPTRKLDAGFYLKNPDDVK"
     gene            9870..11096
                     /locus_tag="U0308_002009"
     CDS             9870..11096
                     /locus_tag="U0308_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HEM2316970.1"
                     /translation="MSKILKKPEVLAPAGNLEKLKIAIRYGADAVYIGGQAFGLRSRA
                     GNFSFEEMKEGIAFAHERNAKVYVAANMVAHAGDTEGAGEFFRTLRDIGIDAVIVSDP
                     ALISICFQDAPGLPVHLSTQASATNYKTLEFWKKQGLERVVLAREVSMQEIQEIGEKT
                     DVEMEAFIHGAMCISYSGRCTLSNHMANRDANRGGCAQSCRWKYDLFEIDNGVSKNLV
                     DTDEEPFSMSAVDLSMIKYIPDMVNAGVDSLKIEGRMKSIHYVSTVASVYRRAVDAYC
                     ADPENYVFDPAWEEELWKVAQRELSTGFFYKEPTEDEQLFGKTRKIPQYAFAAQVLEY
                     DEKTKIATLQQRNNFGVGEEIEFYGPGDTGFKQIVEVLWNEDGVEIDRAPNAMMTIKM
                     PVDKPVKPFYFMRKKK"
     gene            11180..11737
                     /locus_tag="U0308_002010"
     CDS             11180..11737
                     /locus_tag="U0308_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEM2316971.1"
                     /translation="MIGWIIAIAVVVILVLIYFGLYNSLVKYRNRVDETWAQIDVQLK
                     RRFDLIPNLVETVKGYAKHEKETLTQVIEARNKMMEVPADNRQGQIEADNMLSGALKS
                     IFALGEAYPDLKANTSFIELQHELTTTENKVAYSRQLYNTTVMTYNTKVQSVPTNIVA
                     KLHNFTERDMLSIPEVERVAPKVEF"
     gene            11760..12674
                     /gene="htpX"
                     /locus_tag="U0308_002011"
     CDS             11760..12674
                     /gene="htpX"
                     /locus_tag="U0308_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HEM2316972.1"
                     /translation="MLFEQIAANKRKTIFIILGFFIFVLMVGAAIGIIVWNNYLNGLI
                     LAAVIGAFYILIMVMSSSSVVMAMNHAKEVTSKDQAPVLWDTVESMAMVAGIPMPKVY
                     IVEDASPNAFATGISPEKGAVAVTRGLLNKLERYELEGVIAHEISHIRNYDIRLSTIA
                     IALVAVIAILSDLAMRMIFWGSLTGGRNNRKSDNNNSGGAQAIIYIVALIFVILAPII
                     ATAIQFALSRNREYLADASAVELTRNPDGLIQALQKISGDSKKMEEVSASSESIYFAS
                     PLKSKKNKPGLFDSHPPISSRIERLENM"
     gene            complement(12713..13531)
                     /gene="yjbH"
                     /locus_tag="U0308_002012"
     CDS             complement(12713..13531)
                     /gene="yjbH"
                     /locus_tag="U0308_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease adaptor protein YjbH"
                     /protein_id="HEM2316973.1"
                     /translation="MINQNLYYQSVANSKPIEIYLFFDPACDDCWNIEANMLRLQMEY
                     GNYFKLRYVLHNNLQTFVCKQKRAGNSNLSLKEQQIGAHLSYISCLAVKAAELQGKKQ
                     GITFLRKIQAAYFLENKDIASEEVLYDIAVSTGLDLSEFKKDLASTVAKRAYIGDQKV
                     AQEMEIHENPTVVFFNKNIEDAGLKLSGLHRYEVYVHVLSELLNDAPQPEERPQMEEY
                     LAKVKVTSSATMADFYGVSEQQIERQMKKWRLQQKVELIDAPDGQAHWKYIGNL"
BASE COUNT         4421 a         2266 c         2723 g         4203 t
ORIGIN      
        1 tcaaatttct caattagtag attctcttgt gaaactttac aataatccaa gtgacaatac
       61 gattgtgaag tggattgttg ggtttttaaa agaatctaac atacagaaat atttgcaagc
      121 tggggtcgat tttattattg cttcactatc cggtattgga tctgtcggat tatctttctt
      181 cttagcatta attcttagtt tatttttctc tttggaaaaa gaacgagtaa cttcttttac
      241 tgggcagttc atgacaagta aggtaggctt tatttttaaa gaggctgcat tttttggaaa
      301 gaaatttgtt tcgacttttg gagtcgtttt agaggcgcaa ttaatgatcg ctttagtaaa
      361 cacatttatt acgacaatcg cgctttattt aatggacttt ccacagttgc ttagtttatc
      421 cattatggtt ttcgtcttag gattaatccc cgttgcgggg gtgattattt cctgtattcc
      481 actggtgctt atagcttatt ctgttggagg atttcaagat gtggtgtaca ttttaattac
      541 cgttgtcatt gttcatgcaa tagagaccta cattttaaat ccaaaattaa tgtcatctaa
      601 aacgaactta ccggtatttt acacatttat tattttgatt ttctcggaaa cattctttgg
      661 agtgtggggg ctaatcgtag gaattccagt ctttgtattc ttattagata ttttagaagt
      721 gagaaatgca gaagacttaa aaaaacgaac aatatttgga cgcaagaaaa aagtagatta
      781 ggcgatagcc ttaatctact ttttctattc cccataaaaa gtcagctact tcagcatcaa
      841 catcggtatt ttcgtggagt ttactatgag ctgcattctt acctgtgaat gttttttctt
      901 cgtaacttgc tgcctggcct tcaaaaatga atttgccaga taaggcgctc gcaacagaaa
      961 cgctaccatc gctttttgtt ccgtttaaag tatcacctgc aatatttaat acgtgcaaat
     1021 tagtagggat tttttgtttg tttttcatga attcactata acggtctgaa gatttttttg
     1081 gccctgaatc tgtaaggtcg taagctgtaa caccatcatc accaattact agtccattaa
     1141 gtggagcacc gattaaaaca agtttttcaa gaacaggata agttttatca ctacctactt
     1201 tttcaatgta acttgttaaa ctaacgccac ccatggaatg accaactgcg tatacttttt
     1261 cgatatgata attatttttt aattctttca tgacattttg aatccattgt gtttgatttg
     1321 ccgctgagct tttattatct tcaaaaataa cttgaatagt agggttatga ctaaacttat
     1381 catagtttcc atcagagctt acagtcccat cagctgcaac attcataaca agtgattttg
     1441 ttacatcccc gtcttcagca agacgattaa tcatacctcc gaatgaatta attgttccag
     1501 aatacccatg aacaaacaga gtagggattg ctatttctga aacaggtttt tgttcttttt
     1561 ttgttgtttt atttgctgtc acagcaggct ctttagcttc ttttttagtc ggctcaaatt
     1621 gaagaaaaat tatccaaaag ccagtaatga taatggctaa tgcgataatt aaactaataa
     1681 cttttttcat ttcaaacatc ctttaatcgt ttatttctcg ccccataaaa attgaccaac
     1741 atacttatcc actacagtag attcatgcat actactatga gtagcttgtg gtcctttaat
     1801 gacatgtgtc gttacctttt gatgtgcaaa taatttttca ccatataaaa cactatctaa
     1861 tttcacttca ccatcactat ttgaaccatc ttccaaatta ccaccaataa tcataatttc
     1921 agtattgttg ggtaaaactt tggccatttt ctcagcaaat ttagcatgca cattattggc
     1981 atttttaata tcaacctgct gatcgccatt cacatattct tccggataaa atggaactgc
     2041 aagaaacaca attttattta cttgtggata ggacttgttt ttctcgtaac tagctaaata
     2101 agaaacccaa gcaccgccac ccattgaatg acctactgca ttaaattttt ttatggcata
     2161 attttgttgt aaataagaca ttaccttttt tgtccacatt gattgttgag gaagcgttgc
     2221 tcgattatct tcaaaaacaa tgttgataag tggatttttt tcttttttgt tataagttcc
     2281 agtagtagaa atttttccat ctgggcttac atttacggtc aatgactctg taccccaatc
     2341 atacttttgg tcaaagcgac gtatcattcc gtgaagcgag cggtctgtcc cacgataacc
     2401 atgtataaaa atggtaggga tggattcatt ggctgctttt ggataagtcg tgttaatcgt
     2461 cagtaaaata aaaattgctc caactaaaca acctaatggt aagataatgg agaagaacac
     2521 gcgctttagc attattttac gcccctttaa aattcgttat gaacaaatta tacatttttt
     2581 ttatagaaaa cgcacgattg gtctactttt tctactaatt taatggtttc atctcatgaa
     2641 cacatatagt atactggaaa aataagcgaa gaaacggagg catattcata tgattaaacg
     2701 aactggtgag atagtactcg ctattattgg tcttgtttta agtatactcg cacaagcatt
     2761 tattgctatt attggtctat tgatgataag tggttcaaaa ggaaaagaag gtttaacaac
     2821 tttctacaac aactactaca aaacaatgaa tgaatgggag atcccgaaaa aagagattcc
     2881 tgatcccgat cgtgtactag attttgtgca aacattatct tggactgcat taacaggagg
     2941 cttaattacg ctcgcacttg gtatctttgg gatttactac atattcaaaa ataaaaaacc
     3001 agtttttgca ggatatttat ttttagcagc aggcgttgta tcgttgcttt ctacagcact
     3061 aattagtttc attcctgcgt tattattcat tgttgttgcg atactttgtt ttgtccgcaa
     3121 accgaagagc actttttctg gattataatt cgaaacgagt ttgaactttt caagctcgtt
     3181 tttgttttac ttctactttt ttagggaata aaatagtgga tttcaagagg aggttgatag
     3241 tgtgaaaaat aaagtaggaa ttattgccgg agccgtggga gctgtcgctg gagttttagc
     3301 ttgtgcagta gtatacgtgg ttaaaaagca acagccgcct accccttttg atgaggtaaa
     3361 tgatattcgg acccgttacg ctgacaaaga aatttctgaa acagaactgg aagaaaataa
     3421 catgatttca gaaggtggcg tttcatctct tcaatatgaa gaaaaagtca aataatgaga
     3481 atgcagtttg tatcttgtgt tacgcgagaa caagctgttt ttttatgtag aaaacactgc
     3541 ttattatagt agattatgtt atcctgtagt tagacaatag gactcaagtt gtaggtgaat
     3601 ttccttctac agcgggttat tatacttgat agatagggtt atgataggta cagtaataaa
     3661 agaaaatata tcagctacat ttggaagtta ggaggtaggc gtatgagagc aatattgatt
     3721 ggcgtattaa taattttact aattgcgatg atacttatag ttttattgcc agcgatacta
     3781 gcaacaattg gtgcagtgct cggcttttgg tcacttaaga agctacttga agcaaggtcc
     3841 gtaggtgaaa aagttattta tggtattcta attggtgttg gtgccttaat aattctagct
     3901 aacttaaaag gaattctggt tgttgtaatt atcggagcaa tcatttactt cctaactaga
     3961 aataaaaata aaccaagaaa aaatgatgac gtattcgact acccatacaa taaataattg
     4021 gaggagaaaa aaatggcaaa cctttttgaa aaaatgaaac aatggaataa agaagttagt
     4081 gaaaaaatcg agaaacgtga agaaaaacgt cgcaattcag taagttacta tatggataaa
     4141 acaaaacaag aaatgaaaga cgcagaacgc atggtagaaa aacaacgcga actgaaatct
     4201 cttttctaca aggaatataa agaaatggaa gtttatgttg aaaaacgtcg tcaccaagca
     4261 gaaatcgcca aagaagctgg tgaaacaaaa ctagctaatt tcgctttaga agaagtggct
     4321 caatatgaag aacaattaga agctacaaaa gcacattacg atcaagcgtc cgaacagctt
     4381 gaaaaattag aactacgtat gcacgaaatg cgcttaaaat ggaaaaatct taaaacccaa
     4441 catttagctg aaatggctga aaaaaatgca acagaaactt ccgaaaaaat ggacaaagtt
     4501 atccatgaca tgagctgggg tagtgttagt gactatcatg aagcacaaaa acaacgcgat
     4561 ttagcggaag aagcagaaaa gaaagcggat atgagcaaag aactttctca atcctttgat
     4621 gatctaatgg acgaactaga aaagaaaaca aagaaaagca aagaaatcat caaagataaa
     4681 gcgcaaaact ttacaactat ggtagatgaa attattgaac gcgaaaaaca aaatttcaaa
     4741 aaaccagaaa aagcttcgat ggaagatcaa ttaaatgaac ttgaaaaaga agctgcaaaa
     4801 gaaaaaccaa aagaagaaaa agaagtatta attccagaat tagagaaaaa agaagaagaa
     4861 aacgaaacag ataaataaaa gtaattagcg cagaataatc attctgcgct tttttataac
     4921 aaaacgctat gggccttcta aatatgctcg tagctttttt ggttatatta ctttttttcg
     4981 ggtaaatagg aaaagataag ttgcatttta atagatacgt gctataataa ttggtataga
     5041 ccgatttaac aaggaggcaa tatgtaatga ctaataaagt aattactaac gctacaattt
     5101 atactggtaa aggtgttcta gaaaatgctt tcgtacgttt tgacaaacaa attttagagg
     5161 ttggctcgat ggctgatttc caagcggaca aagcagaaga agtaatcgat gccaaaggac
     5221 aaaaacttgt tccaggtttc attgatgttc attcccacgg tggttatagt tttgacgcaa
     5281 tggatgcaga tccagaagca cttagaaaac aagtgaacgg aatgttaaat gaaggaatca
     5341 ctacttactt cccaacaacg atgacacaat cacatgaaaa tattgaaaaa gcattaaaag
     5401 tgatcaatga ggttgctcaa acagaacctg ttattggtgg aattcatttg gaaggtccat
     5461 ttgtttctaa agtctttaaa ggcgcacaac cagaagaata tattcaagca cctgacttgg
     5521 aacttttcaa aaagtggttt gatatttctg gtggtttaat taaattagta acatatgcac
     5581 cagaacatga tacttcagct gattttgaaa atttgtgttt tgaactaggg gttgttccga
     5641 gtattggtca ctctaatgat gttcgtgagc acttgaaaac aagtaaagcg acacacgcga
     5701 cacatttata taatgcttgt caccgtatga cgcaccgtga gccaggcgtt ccaggtcatg
     5761 ttttactaga acgcggtatt aatgcagaac taatcgttga tggcattcac gttcatcctg
     5821 atatggtgaa attagcttat caaatgaaag ggccagaaca tttatgcatt atcactgact
     5881 ccatgcgagc aaaaggtatg ccagaaggga aatctgaact tggcggccaa actgttatcg
     5941 tgaaagataa acaagctcgt ttagaagatg gaactttagc tggaagtgta ctcacttatg
     6001 acgatggctt ccgcaacatg attaaattta ctggatgctc ggtagaagag gcagttctta
     6061 tgtcttctgg aaaccaagca cgcgaattta atttaacaca aaaaggtgca atcgaggctg
     6121 gtaaggatgc agatttcaac ttacttgacg aagatttaca cattacagca acttattcat
     6181 tcggaaaaaa acattcttga gaggaagata ataaaatgca acttatcaca acagaaaata
     6241 aattagcagg atccaaaaaa gcattagaaa tcattgaaaa aggaattaca tcaggtgaag
     6301 taaacacact tggcctagca actggtagca caccagaaac actttatgca gagcttgtaa
     6361 aaagcgatgt tgacacaaaa aatgtcacaa caacgaactt agatgaatat gtaggtcttg
     6421 cggcaaacga cccaaacagt tatcattact atatgaacga attgttattc tctaaaaaag
     6481 catttaaaga aagtttctta cctaacggag aagcgacgga tgcagaagca gaatgcgcac
     6541 gttatgaaga aattttatct gagcacccaa ttgatattca agtgcttgga attggaacaa
     6601 acggccatat tggttttaac gaaccaggaa ctccttttga ttcgttaaca cataaagttg
     6661 ttttaacaga ttccactcgt gaagctaata aacgcttttt cgaaagagaa gaagatgttc
     6721 caacacatgc ttattctatg ggaattaaat ccatcatgaa tgcgaagaaa attatcctac
     6781 ttgcttttgg tgaaaacaaa gcacaagcaa tcaaagaaac tattaaagga cctgtagatg
     6841 tgaattgtcc tgcttctgta cttcaaaatc atccagatgt tactgtgatt cttgacaacg
     6901 aggcggcgtc acttctataa gaagagggcg ggaaaatgat cgataaacaa tcaggaatac
     6961 cgatttacat tcagattcaa agtgaaatta aaaagaaaat ggaagatggt gtttggaaag
     7021 ttggcacttc tattccagct gaacgtcaac ttgctgaaat gtttcacgtt agccgaatga
     7081 cggtaagaca agccattcaa ggcctcgttg atgataacat tttgcaaaga cgtgttggtg
     7141 ccgggacctt tattgcggaa aagaaactaa ccgaacgact tgaagctgtt acgagtttta
     7201 cgaatttgat gttacaagag gggaaagttc cttcgacgcg aatcgtatcg tatggcattc
     7261 gtccggcaag tacgcaagaa caagaagcgt tgcaactgcc agaaaacagc aatgtaatga
     7321 aaattgaacg gattcgttac ggcgaccgtg tgccaattct ttatgaagtt gctgccattc
     7381 cagaaaaaat tgcttcactg cttacaaagg aagacattat ggattccctt tataaagcga
     7441 ttgaattaaa acttggtcaa ccaattggag aagcggaaca aatcatggaa gcttctttag
     7501 tatcagaaaa aattgcgcca tatcttgatg tgaaactcgg atcgccggtt atgaaactca
     7561 ggcagattac aacgttagaa gacggtcgac catttgaatt tacgcgttcc cagtatgtag
     7621 gtagtagatt tcaatttgta gctaggatta aacaataaat aaaagcttga ggcggaatct
     7681 gtctgcccca agcttttttg cataatgatt ttcgttgtct ttttgcaaat aaaaaagtat
     7741 aatgagatga gtaaaaaatt tgcggggagg actagccatg agctggatga ttatattgat
     7801 atgttttggc gcgtccgtat tacttacacc gctaattcga aaaatagctc tatactttga
     7861 tattacagat aaaccagacc aacgtcgtat taatattaaa ccaattccga gtttaggtgg
     7921 actagcaatg tttatcagtt ttactatcgg aatgttttta ctcccaattg aaaacgaatt
     7981 cttatggccg cttctgattg cagcatttgt catggttttg actgggctat tagatgatat
     8041 tatggaattt aaagcaagat ataaattaat cggccaagtt accgctgcct ttattattgt
     8101 gttttggggt aacattagta tcgactttat caacttacca ttcggtgggg aaatccattt
     8161 tggggtgtta agtatcccac tcacaattat ttggattgta gccattacga acgctataaa
     8221 tctaattgat ggactggacg gtcttgccgc aggtgtttca accattgcct tactcactat
     8281 tttaggaatg gcgtttatta tgggagatgc actagtaatt atgatagcaa gtgtgttaat
     8341 cgctgggaca cttggtttct taccttataa ttttaatcct gcaaaaattt tcatggggga
     8401 cactggcgcg cttttcttag gttttattat ttccgtgtta tccgtgatgg gattcaaaaa
     8461 tgttacgttt atctctttaa tcgtaccaat tttaatttta ggtgtaccga tttctgatac
     8521 actttttgct attatacgac gcatggtaac gaaacaacca atcgcgatgg cagataagtc
     8581 gcatttacat cattgtttat tacgactagg cttcacgcat cgtcaaacgg ttattttgat
     8641 ttatgccatt gccgcactat tttctttatt tgccttcatt ttcacgatgt cgacactgtg
     8701 gggttcgatg attttaatcg gtgtactact cattttaatt gaggtattga ttgagacgct
     8761 tggattagta gggagcacat atcgcccatt acttaattta tttaaattaa ccaaagaaga
     8821 aaaaatagat tagagattgg tcacttagac tagtctcttt tttttatgcc aaaattctta
     8881 ttgagtaaca agtcttcttg tgatacattt atcaagtaac gtttttgtag aaatgaggag
     8941 aaaaacatgg aaatcattgc gacagcagat tcaatgaaac aagctgaaca attgcttcgc
     9001 gcgggggtag acagactata tgtaggtaat agccaatttg gtttaagatt gccgcattca
     9061 ttttctgtcg aagaattacg tgaaatagtt catttagcac atcaagaagg aaagaaagta
     9121 actgtagcag taaattcgtt aatgcataac gaacatatgg aagagttacc gggattttta
     9181 gagcatcttg cagatatgaa agtggatgca gtaacgtgcg gtgatccagg ggcaattatg
     9241 cttttgagtg aaatggctca accgattccg tttatttatg acgcccaaac atttgtaact
     9301 agcgcagaac aaatctcgtt ttgggaaaaa caaggagcga ttggtgcggt acttgctcgg
     9361 gaactaacag aaggcgaaat caaagccatt gcaagtagcc ttactatccc agttgaagtt
     9421 ctggtttatg gaccaacatg cattcaccaa tcgaaacgta aactagtaac gaattatgag
     9481 cgtattgtcg aactggaaga tgatacatcg aaggaacgtg gtctttattt acgcgaacct
     9541 aatgatgaaa caagtcaatt accaatctat gaagatgagt ctggaacaca tatttttgct
     9601 tccgaagatg tttcacttgt cccttatttg gcggacttat atgaggctgg attgaaaaca
     9661 tggaaactag atggtgttct tgcagaatca gagaattttg ttcaaatcgc atcgctgtta
     9721 gttgaagcga aagaagctgt tatgaaaggt caatttgtcg cagagtattt tgtgaataaa
     9781 ttaacggaac ttcagcctcc aacacgaaaa ctagacgcag gattttattt gaaaaatccg
     9841 gatgatgtga aataggggga atagcataaa tgagtaaaat attaaaaaaa ccagaagtgc
     9901 tagctccggc tggcaactta gaaaaattaa aaattgccat tcgctatggt gcggatgctg
     9961 tatatattgg tggtcaggct tttggtcttc ggtcacgagc aggtaatttt agctttgaag
    10021 aaatgaaaga aggtatcgct tttgcgcatg aacgaaatgc aaaagtgtac gttgcggcaa
    10081 atatggttgc gcatgctggt gatacagaag gtgctgggga atttttccga acattacgcg
    10141 atattggtat tgatgcagtg attgtatcgg atccagcgct cattagcatt tgttttcaag
    10201 atgcgccagg gttaccagtc cacttatcta cacaagcctc ggcaacaaac tataagacat
    10261 tagaattttg gaagaagcaa ggtcttgaac gagttgtact tgctcgtgaa gttagcatgc
    10321 aagaaattca agaaatcggc gaaaaaacgg atgtcgaaat ggaagcattt atccatgggg
    10381 caatgtgtat ttcttattct ggtcgttgta ctttatcaaa tcatatggct aatcgtgatg
    10441 cgaaccgtgg cgggtgtgcg caaagttgtc gctggaaata tgacttgttt gaaattgata
    10501 atggtgtctc gaaaaattta gtggatactg atgaagaacc gttttcaatg agcgcggttg
    10561 atttatcaat gattaaatac attccggata tggtaaatgc tggtgtggat agtttgaaaa
    10621 tcgaaggacg aatgaagtcc attcattatg tttcgactgt cgcaagtgta taccgtcgtg
    10681 ccgtagatgc ttactgcgcg gacccggaaa attatgtatt cgatccagct tgggaagaag
    10741 aattatggaa agttgcacaa cgcgaactat ctacaggatt tttctataaa gaaccaaccg
    10801 aggacgaaca actatttggg aaaacgcgga aaattcctca atatgctttt gcggcgcaag
    10861 tattggaata tgacgagaaa acgaaaatcg ctactttaca gcaacgaaat aattttggtg
    10921 ttggagaaga aattgaattt tacgggccag gagatactgg atttaagcag attgtagaag
    10981 tactttggaa tgaagatggt gtagaaattg accgtgctcc aaatgcaatg atgaccatta
    11041 aaatgccggt agataaacct gtgaagccat tttactttat gcggaagaaa aaataaaaat
    11101 ctcatgctgc agtaggattg tcgtgtactc cctaagtaag gtataatggg gtaagtacat
    11161 atgaaggagg agattaatta tgataggatg gattattgct atcgctgttg ttgttatttt
    11221 agtattgatt tattttggtc tatacaacag ccttgtaaaa taccgtaacc gtgtggatga
    11281 aacttgggcg caaattgacg tacaattaaa acgtagattt gatttaattc ctaatttagt
    11341 tgaaacagtt aaagggtatg caaaacatga aaaagaaaca ttaacacaag taattgaagc
    11401 tcgtaataaa atgatggaag ttcctgctga caatcgtcaa ggtcaaatcg aagcggacaa
    11461 tatgttaagt ggagcgctta aatccatttt tgcattagga gaagcttacc cagatttaaa
    11521 agcaaatact tctttcatcg aattgcaaca tgaattaact actacggaaa ataaagtggc
    11581 ttattctcgc caactttata atacaaccgt aatgacttac aacacaaaag tacaatctgt
    11641 accaacaaac atcgttgcaa aactgcataa ctttacagaa cgtgacatgc tttctattcc
    11701 tgaagtagaa cgcgttgcac caaaagtaga gttttaagcc atgaaggaga gcgaaaatta
    11761 tgctatttga acaaattgca gcaaataagc gaaaaacaat ttttattatt cttggctttt
    11821 tcattttcgt tcttatggtt ggcgctgcta taggtataat tgtttggaat aactatctga
    11881 atgggctcat actcgcggca gtgattggtg cattttatat tttgattatg gtaatgagca
    11941 gttcatctgt tgtcatggcg atgaaccatg cgaaagaagt tacatccaaa gatcaagcgc
    12001 cagttttgtg ggatacagta gagagtatgg caatggttgc tggtattccg atgccaaaag
    12061 tatatatcgt tgaagatgca agtccgaacg catttgcgac ggggatttct cctgaaaaag
    12121 gagccgtggc ggttactaga ggattgctta ataaattaga acgttatgaa cttgagggcg
    12181 ttattgcgca tgaaatttct catattcgta attatgatat tcgattatca acgattgcca
    12241 ttgcgctagt agctgttatt gcgattctta gtgatttagc tatgcgaatg attttctggg
    12301 gaagcctaac tggtggcaga aataatcgta agagtgacaa taataacagt ggcggggcac
    12361 aagcgattat ctatatcgtt gcactcatat ttgttatttt ggcgcctatt attgcaacag
    12421 ctatccaatt tgctttatct cgtaatagag agtatttagc tgatgctagt gcggtagaat
    12481 taaccagaaa tcctgatgga cttatccaag ctttacaaaa aatcagcgga gattcgaaaa
    12541 aaatggaaga agttagtgct tctagtgagt ccatttactt tgcgtcacct ctaaagtcta
    12601 aaaaaaataa gccaggtctt tttgactctc atccgccaat tagttcgcgg attgaacgct
    12661 tagaaaatat gtaaaaaaaa agaagcaacc caggaatggg ggtgcttctt ttttataagt
    12721 ttccgatgta tttccagtga gcctggccat ctggagcatc gattaattct actttttgtt
    12781 ggagacgcca ttttttcatt tgacgctcga tttgttgttc agaaacacca taaaaatctg
    12841 ccatagtagc ggaagaagta acttttactt ttgccaagta ttcttccatt tgcgggcgtt
    12901 cttctggttg tggggcatca tttaaaagct cggataaaac atgcacataa acttcataac
    12961 gatgaagccc acttagtttt aatccagcat cttctatatt tttattgaaa aagactacgg
    13021 taggattttc atgaatttcc atttcttgag ctactttttg atcgccaata taagcacgct
    13081 tggcaactgt agaagctaga tcttttttga attctgataa atctagaccg gtggaaacgg
    13141 cgatatcata aagtacttct tcgctagcga tatctttatt ttcaaggaag taggctgctt
    13201 gtattttgcg caagaatgta attccttgtt tttttccttg tagttcagcg gctttgactg
    13261 caagacaaga aatataggaa aggtgcgccc ctatttgttg ttcttttaag cttaggttac
    13321 tatttcctgc gcgcttttgt ttacatacaa atgtctgcaa attattatgc agaacatagc
    13381 gcaatttgaa atagttcccg tactccattt gtaatcggag catattcgct tcaatattcc
    13441 aacagtcatc acaagctgga tcaaaaaata gataaatttc gattggcttg gaatttgcta
    13501 ctgactgata atataaattt tggttaatca tttgctatca cctgattttc aaattctaaa
    13561 tatcttcaaa cagatactca tttcaatgta ccagtgtgaa aagaaataat tca
//
LOCUS       DASDYK010000074        13505 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.074, whole genome shotgun sequence.
ACCESSION   DASDYK010000074 DASDYK010000000
VERSION     DASDYK010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13505
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.074"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            151..750
                     /locus_tag="U0308_002013"
     CDS             151..750
                     /locus_tag="U0308_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014952531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316974.1"
                     /translation="MLVIVAASVGYYFIKENERKTPQTIDYKTVETKRTDLSVYVSAE
                     GHIVKKENEWPDYEDFAVKIMVDELEINQIKEKQTADVYVEAVNNKVYKGKVVDINEK
                     GIINGSVTSYAVTIDLEDETKVKENMSVSADVLVALEKKILTIPIEAVNTDKADKHYV
                     YTVDANKQKKKIWIEVGKHNTKSIQVVKGLTEKQLVIIP"
     gene            768..1442
                     /locus_tag="U0308_002014"
     CDS             768..1442
                     /locus_tag="U0308_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003770363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2316975.1"
                     /translation="MIQLFNISKSYQMGECTIKALDNVSLQIDQGEFLAIIGPSGSGK
                     STLMNILGILDRATIGEYYLNKTNLMRISDKKISRIRNRKIGFIFQQFNLMPRLTAFE
                     NVELPLVYRGVGKATRKKVVLKSLERVGLLDKEKHIPAQLSGGQQQRIAIARAIAGSP
                     ELILADEPTGALDSKTGEEVMTLLREIHREGNTLIMITHDKEIANQAERIIEIKDGKL
                     REWNKL"
     gene            1439..2605
                     /locus_tag="U0308_002015"
     CDS             1439..2605
                     /locus_tag="U0308_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2316976.1"
                     /translation="MTLLQSIKLALKQLLSTKFRTFLTMLGIIIGVFSVILLVSIGEA
                     ISKNVSTQLGDMGSNLLTVNFYSDNPNDKFTYKDAKKLLNEDEIGSPEVMQTKEVRTS
                     EKTASNQVAGINEYYASIKNLELASGRFCSNVDVIYAQKVTIIGSEIAKTYFKEQNPI
                     GEYLQIAGARYMVIGVLKEKGESLFGSADKKLFIPISSAERLFKTDTVDLYYIQTKKV
                     EQVPAAVKVVKKKMSQFFPSNEDAYTVANQQQALDTFDSITGTLTIGLGAIAGISLLV
                     GGIGIMNIMLVSVSERTREIGIRKAIGASSGNILMQFLIEAVVLSLVGGCIGILLGIF
                     SAQIVTTTSSFEMYVSASTILLAVGFSMCIGIVFGVIPAQKASKKMPIDALRAD"
     gene            2624..2767
                     /locus_tag="U0308_002016"
     CDS             2624..2767
                     /locus_tag="U0308_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003760374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BH0509 family protein"
                     /protein_id="HEM2316977.1"
                     /translation="MEKEQQTDDTWVLVEIVSLITNVERQRLRELSYTELEEFYERVV
                     VEQ"
     gene            2838..3320
                     /locus_tag="U0308_002017"
     CDS             2838..3320
                     /locus_tag="U0308_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEM2316978.1"
                     /translation="MNESICKRDNGGAVVNFELEINATKAEVFALLTTNAGLAKWFNE
                     LEVGELGADGYLLFVMTPEEKITMPIRAFETNQKLAFEWDQDEVDFELNEITANKTRL
                     TFREQLTTITEHSPRDISGWHICLKKLQASAEGKIYDFNKTEFETLFAKYQKELNIEK
                     "
     gene            3489..3947
                     /locus_tag="U0308_002018"
     CDS             3489..3947
                     /locus_tag="U0308_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2316979.1"
                     /translation="MIVSEEQLFLNQHLRTKEEVLAFIADKAEEIGITTDSAQVERDL
                     WAREKEYATAVQQLIAIPHAKTEAISEAKLLFIRLTEPIDWESKEGFKAQAIFAILVP
                     ASEASQQHLKILSSVAVNLLEEAFQEQILTIKTEHELMDYLKDNLEGELI"
     gene            3944..4276
                     /locus_tag="U0308_002019"
     CDS             3944..4276
                     /locus_tag="U0308_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIB"
                     /protein_id="HEM2316980.1"
                     /translation="MKVVGVTSCIAGLAHTPMAAKALEKAGVKLGHDVKIEQQGAMGT
                     IDEITPAEVSAADVVIIAADKVIDGEERFKGKPVVRVKIGQCVANGEAVLSKVVAAIE
                     ARKQKEAN"
     gene            4280..5392
                     /locus_tag="U0308_002020"
     CDS             4280..5392
                     /locus_tag="U0308_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017471260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HEM2316981.1"
                     /translation="MKGKLNEAKDHLMSGISYALPVIIAGSLVVAVAKLIGIIGGVTN
                     LDAYADASGFYHYVYLFQNVGWAAIGLLNLVLAGYIAYSIAGKPALAAGFVGGVLATS
                     TNAGFLGAVVAGFFAGWLTNWVKKHVRITGPAASSLPLIILPLITVGATGILMSLILG
                     GPLGWLNQTLLDWVTEMCKNDTNVIILALILGAMIGFDLGGPVNKAAWMAGNALFMSG
                     IYLPSIMINVAICIPPLGYGIATLLRKKNYSTTFKEAGNGALIMGLIGVTEGAIPFTL
                     RSPGKLIPLNVIACAIGSAVTMGLGAYVKMPPIGGMYGFFTIGNGWAYLVGGLVGAFI
                     IGICANLFVNFTEEETAAADDAVDDIDISFDEIEIK"
     gene            5414..8041
                     /gene="mngB"
                     /locus_tag="U0308_002021"
     CDS             5414..8041
                     /gene="mngB"
                     /locus_tag="U0308_002021"
                     /EC_number="3.2.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosylglycerate hydrolase"
                     /protein_id="HEM2316982.1"
                     /translation="MAKTKVHVIPHSHWDREWYFTSSRSTIYLVKHLKEVIETLEAKD
                     DYHFYLMDAQSSLIEDYLRYCPEDKTRLEKLIAEKRLITGPWYTQTDQLVISQESIVR
                     NLLYGTRIAREMGHSMAVGYVPDAFGQGGNMPQIYKEFGISKFLFWRGVADNRLKQTE
                     FIWRGDDGTEMLAEQIPFGYYYGANIPENEAELKTYLDDQIGALEEKASTRNVYFPNG
                     LDQAPVRKNLPELVAKFNELDSTREYQIASPETFFADLEKDVTNLPVIAGELTEGKHS
                     RLHKSIFSTRADLKQANNEIENFLSNVLEPVLSISYSLGNRYPHNELAEIWKLMFENA
                     AHDSIGGCNSDTTNRDVKHRYKLASDLATNLLDLNMRLISEKIEQKQPFQFTVFNPLP
                     YEKSGVIKMTAYIPEDNFEIEDTQGNTLEYTILEKTDLTDYVLNQHIDLNPSKSIYLP
                     EKVFLATMLVNVNSLPALGYDTIYFNLEKETAEQEPTQSTMTKIENEFYEIQLAANNS
                     LTIHDKKAGRTYTDQMLFVENGDDGDSYNYSPPRKDLVISSEEAVVESLESSISSVNQ
                     TLTISFKLNVPYNLEERANGEKSNEMTIKTVISLRKNEELIRFDVQVANQVLSHRLCV
                     TFATEIASKFSTADQLFAPIQRPVRLPEMDVWEAEEWQEAPISIEAMQSFVSLHDEAH
                     GVAVMTEGVREYEIIGENYDTISLTLFRTFSHMGKTDLLYRPGRASGESIVATPDAQL
                     LGEINATFALTLFESSFDEADIAKKAKEYLSNPPVYQMSDFLNGRLIYVYRDEEKTLD
                     ATYSLALPTIDGAIISAVKKAEDADAFITRFFNPYLQKEITIPEVFQGKERHLDESES
                     NEKQTRLKHAKVQSYLFEK"
     gene            8074..10008
                     /locus_tag="U0308_002022"
     CDS             8074..10008
                     /locus_tag="U0308_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2316983.1"
                     /translation="MGYFAYKRLETLYGMLLDAGSHLSAQKLSQDLHISERTIRTDIA
                     KLTEFLESYGATITLTRGAGYKIEILDSLVFQAFQAEKNKPKNAGYFDLDNPEERVKY
                     EIFMLLSSGDYIKLEDLADTIFASRATISNDMKQVRKVIAVYDLTLVSKPGSGVKIIG
                     EEEKMRYALTALIASKNAPESYLETFFEWHKQKDKLQKLMTAVTDYFFATNIRFTDEA
                     LQNLLLHMMILVERIELGHTLEKFELTDVSEEEIAIATKLSTIIESLFEIDIADADKN
                     YLLLQIASKRILNVEDKEISEFDDYAYIEGMLNRIESHYFYHLQDDMQLKKDLVAHIH
                     SMLYRVKYHMTVKNPMTEHIKRYYPLAYEITLDAVESLKKDYPYDINQNELAYLALHI
                     GASLERNYQISYYRHKSALIVCGSGFGTARIVEAKVKSAVSNLDITKVVSIQEYNRFI
                     HIEEDIILSTVRIPEKNKPVIKISNIPTNEELKMLGAIIQEQTDPNRGFLSNFFTADF
                     FARSSMTNKTAILEEMVDSLRQQNIVGEGFLQSVLEREKLGSTVLGTGIAIPHPLGLM
                     AKETKIVIRILDKPIKWDQKQSVRAVFLLCISKNDYEEAINIYELLVELVREEYGEKL
                     SRLSDFHAFTALANDILKKK"
     gene            10135..10551
                     /locus_tag="U0308_002023"
     CDS             10135..10551
                     /locus_tag="U0308_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HEM2316984.1"
                     /translation="MNRQTEFTLLIVGASLSILTFLGAMLYTIIFGLNTLMVADTFGY
                     YSSSEETIVLGIITFFSVVAAFFALGSAVFGFIGAFKVKSDGPKVKTLGVCFIVLGGL
                     QVFTIHGILFLIAGILTITKKEYKTNSKEDEGTKWE"
     gene            10542..10940
                     /locus_tag="U0308_002024"
     CDS             10542..10940
                     /locus_tag="U0308_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2316985.1"
                     /translation="MGMITFLPIFFIFAIFLGLAAKVLLAIWIYKDAEQRGMNAILWC
                     LLMVFINVIIILVIYLIVRNKGEVMKQNLGLLISGIGIAVLNTLMAIMAFIFIIFFAV
                     NDGGMHNMMDGYNYDYDDGYEYDMDNFEDF"
     gene            11049..12056
                     /locus_tag="U0308_002025"
     CDS             11049..12056
                     /locus_tag="U0308_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEM2316986.1"
                     /translation="MDTVILITVIIVIMGLAFDFINGFHDIANAVATSISTRALKPRV
                     AIGIAAVMNFLGAISFTGVAESLTKSIVDPFSLNNGEFVVLCGLIAAVIWNLMTWLVG
                     MPSSSSHALIGAIAGASIASASSFSVLNWSGFTTIIIALIISPIIGFTVGYLIYSLFK
                     HLFHDKKLGKMNRRFRFIQIGTAAAQAYSHGTNDAQKTMGIITLALVASGLLKESAGI
                     PFWVQVSCAASMAIGSSVGGYRIIKTVGTKIMKITPVTGVASDLSSLSVIMTATLIHL
                     PVSTTQVIDSSIMGVGTANHKKEVNWRTGKNMVVTWFITLPLAGLLAAVVYWISAAIF
                     L"
     gene            12072..12452
                     /locus_tag="U0308_002026"
     CDS             12072..12452
                     /locus_tag="U0308_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2316987.1"
                     /translation="MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFTSYFL
                     SFEDGARLEIMSRTDVTGITTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEP
                     RMTGDGYYESVVLDPEGNRIEITW"
     gene            12521..12913
                     /locus_tag="U0308_002027"
     CDS             12521..12913
                     /locus_tag="U0308_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1149 family protein"
                     /protein_id="HEM2316988.1"
                     /translation="MDIVTNKIVVEKYNFETIMEENEQFENKIELEVHEVEPVNGNVE
                     LMSKGKIFKITIPFLLVLENFRIDGRISRIIQLKDFFGDFSDLEAVDVEGLSNPLIDY
                     IKRLTYDVTEIAFDEPGVSLDFNANHNS"
     gene            12926..13348
                     /locus_tag="U0308_002028"
     CDS             12926..13348
                     /locus_tag="U0308_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NusG domain II-containing protein"
                     /protein_id="HEM2316989.1"
                     /translation="MRQYMKMVRPFDFVIIILLILGSFLPLILFSVAEAKHVGDDVVA
                     VISQDGKVVREIPLTGHKGNEQFTIKGKGAQYNLMEVDGERIRIKEDNSPDQVGVKMG
                     WKSKAGDTIVCLPHKVFVEIKSTNKKSKDPDTDLIVPN"
BASE COUNT         4583 a         2246 c         2824 g         3852 t
ORIGIN      
        1 ggaagaatta gctaatataa ttgaaatttt aaaatcatgg aattacgggg aactaaaaaa
       61 atgttttcaa cacataatga acgcaatgat tttgattgct ttttaaagag aggtttttaa
      121 atattgaaaa aaataagctg ggtgattatc atgctggtta tcgttgctgc atcggttggc
      181 tattatttta taaaagaaaa tgagcgaaag acgccacaaa caattgatta caaaacagtt
      241 gaaacaaaaa gaacagattt aagtgtatat gtttccgcag aaggtcacat tgtaaaaaaa
      301 gaaaatgaat ggccagatta tgaagatttt gctgtcaaaa ttatggtaga tgagctagaa
      361 attaaccaaa taaaagaaaa acagacagct gatgtgtatg tcgaagcagt aaataataaa
      421 gtatacaaag gaaaagttgt agatataaat gagaagggca ttataaacgg gtcagtaact
      481 tcttatgccg tgacgattga tttagaggat gagacgaaag taaaagaaaa tatgtctgta
      541 agtgctgatg tacttgtggc tctagaaaaa aagattttaa caattccaat agaagctgtt
      601 aatacggata aagctgataa acattatgtc tatacagttg atgcaaataa acaaaagaag
      661 aaaatttgga ttgaagtagg caaacataat acgaaatcta ttcaagtagt aaaaggtctt
      721 acagagaaac aacttgtgat tattccatag acggaggtga gcaagacttg atacaactat
      781 ttaatatttc caaatcctat caaatgggtg aatgcaccat aaaggctcta gataatgtat
      841 cattgcaaat tgatcaaggg gaatttctgg ccattatcgg accgtctggc tctggaaaat
      901 ctactttaat gaacatcctc ggtatacttg acagagcaac gataggagaa tactacctca
      961 ataaaacgaa tttaatgcga atatcagata agaaaatttc tcgaataagg aataggaaaa
     1021 ttggttttat ttttcaacaa tttaatttaa tgccacgact tactgctttt gaaaatgtag
     1081 aattgccatt agtatatcga ggtgtgggca aagctactcg aaaaaaagta gtattaaaaa
     1141 gtttagaacg tgtcggacta ttagataaag aaaaacatat accagcccag ctttcaggag
     1201 gacagcagca acggattgca atagctcgag ccatcgctgg aagtccagaa ttaatattag
     1261 cagatgaacc tactggcgcg ctagactcta aaactggaga agaagtaatg actttgctaa
     1321 gagaaattca tagagaagga aatacattaa tcatgattac ccacgacaaa gaaattgcaa
     1381 atcaagcaga acgaataata gaaataaaag acggaaaact ccgtgaatgg aacaaattat
     1441 gactctttta cagagtataa agttagcgct aaaacaatta ttgtccacca aatttcgaac
     1501 atttttaaca atgcttggaa ttattattgg tgttttttct gttatattac ttgtttcgat
     1561 tggggaagct atatcgaaaa atgtctccac acaattaggt gatatgggaa gtaatctttt
     1621 gactgttaat ttttattcag ataatccaaa cgataaattc acatacaaag atgcaaaaaa
     1681 acttttgaat gaagatgaaa ttggttcgcc ggaagtgatg cagacaaagg aagttagaac
     1741 aagtgaaaag acagctagta atcaagtagc gggaataaat gaatattatg cgagcataaa
     1801 aaatttggaa ttagcatcag gccgtttttg ctcgaatgta gatgttatct atgcccaaaa
     1861 agtgacaatt attggctcag aaattgcaaa aacttatttt aaagaacaga atccgatagg
     1921 tgaatatttg caaattgcag gtgctaggta catggtcatt ggagttttaa aggaaaaggg
     1981 ggagagttta tttggatcgg cagacaaaaa actttttatc ccaatttctt ccgcagaacg
     2041 actttttaaa acagatactg tggatttgta ttatattcaa acaaaaaaag tagaacaagt
     2101 tccagcagca gttaaggtag taaagaaaaa aatgagccag ttttttccaa gtaatgaaga
     2161 tgcgtataca gttgcaaatc agcaacaggc gttagatacg tttgatagta ttacgggaac
     2221 actcacgatt ggactaggtg cgattgcagg gatttcgcta ctcgttggcg gtattggtat
     2281 tatgaatatt atgctcgtgt ctgtctcaga acgaacccga gaaattggaa ttagaaaagc
     2341 gattggcgca agtagtggca atattttaat gcagtttttg attgaagcag ttgtgcttag
     2401 tttagtaggc ggttgtatcg ggattttact aggaattttt tccgcgcaaa tagttacaac
     2461 tacatcaagt tttgaaatgt atgtttctgc ttctacgatt cttttagcgg ttggtttttc
     2521 gatgtgtatt gggattgtat ttggtgtaat tcccgcacag aaagcttcaa aaaaaatgcc
     2581 gatagatgcg ttacgggcag attaactaga ggaggcgtgt tggatggaga aagagcaaca
     2641 aacggatgat acttgggttt tagttgaaat tgttagcctt ataaccaacg tggaacgaca
     2701 aagattgaga gaacttagtt atacagagtt agaagaattt tatgaaagag tagtagtgga
     2761 gcaataatta aatcttgctt tttgctagaa tgataaatct atgcgaaaat gaaagcaaat
     2821 tggcaggagg gatttaaatg aacgaatcta tttgtaaacg ggataacgga ggagctgtag
     2881 ttaattttga attggaaatt aatgcaacaa aggcagaggt ttttgcttta ttaacgacaa
     2941 acgccggact agcaaagtgg tttaatgagc tggaagtagg cgaactagga gcagatggct
     3001 atctactttt cgtcatgaca cctgaagaaa aaataaccat gccaattcgt gcattcgaaa
     3061 ctaaccaaaa acttgctttc gaatgggacc aagatgaagt tgactttgaa ctaaatgaaa
     3121 tcaccgcaaa taaaacaaga ttgactttca gagaacaact tacaactatt acggaacaca
     3181 gcccaagaga tatttccggt tggcatattt gcttgaagaa attacaagcg agcgcagaag
     3241 ggaaaatata cgatttcaac aaaacggagt tcgaaacgct cttcgccaag tatcaaaaag
     3301 aacttaatat cgaaaaataa atcctttaga aaagtcgtaa atgaagccga gaatgctttg
     3361 tttatggctt tttttgtatg tattaatttt tttccacttt aactggaaat tccttatgtt
     3421 caaaaaagta atcggtttca ttagaatgta attgtaagca aggcattgaa aaaatacggg
     3481 gtgacgaaat gatagtatcg gaagaacaat tatttttaaa tcagcatcta cgcacaaaag
     3541 aagaagtgct agcttttatt gcagacaagg cagaagaaat cggtatcaca acagattcag
     3601 ctcaggtgga acgtgactta tgggctcgcg aaaaagaata cgcaacagca gtacaacaat
     3661 taatcgctat tccacatgcg aaaacagagg caatatcaga agcaaaactg cttttcattc
     3721 gcctcactga accgattgat tgggagtcaa aagaaggttt taaggcacaa gccatttttg
     3781 ccatattagt tccagctagt gaggccagcc agcaacatct gaaaatttta tctagcgtgg
     3841 ctgtgaattt actagaagaa gcatttcaag aacaaatttt aacgattaaa acggaacacg
     3901 aattgatgga ttacttgaaa gataatttgg aaggagaatt aatatgaaag ttgtaggagt
     3961 tacgtcatgt atcgcaggac ttgcgcacac accaatggca gcaaaagcat tagaaaaagc
     4021 aggagtaaaa ttaggacacg atgtcaaaat tgagcaacaa ggagcgatgg ggacaattga
     4081 tgaaatcacg ccagctgaag tgagcgcggc agatgtagtt atcatcgcgg cggataaagt
     4141 aatcgacggg gaagagcgtt tcaaaggaaa accagtcgtt cgtgtgaaaa ttggtcaatg
     4201 tgttgcgaac ggggaagcgg tgttaagtaa agtagttgca gcaattgaag cacgtaaaca
     4261 aaaggaggct aactaagtca tgaaagggaa attaaacgaa gcaaaagacc acttaatgtc
     4321 gggtatatcc tatgcgctac cagtcattat cgcaggttca cttgttgtag ctgttgcaaa
     4381 attgattggg attattggcg gggttacaaa tctggatgct tatgctgatg caagcggatt
     4441 ttatcattat gtttatctat ttcaaaatgt aggttgggcg gcaattggct tacttaactt
     4501 agtacttgcg ggatatatcg cttattcaat cgctggaaaa cctgctcttg ctgctggttt
     4561 tgttggtggg gtccttgcta ctagtacaaa tgctggtttc ttaggtgccg ttgtcgctgg
     4621 tttcttcgca ggttggttaa caaactgggt gaaaaaacat gttcgaatca ctggacctgc
     4681 tgcaagttct ttaccactaa ttattttgcc acttatcaca gttggtgcca cggggatact
     4741 gatgtcacta attctcggcg gaccgcttgg ttggttaaac caaacgttac ttgattgggt
     4801 aactgaaatg tgtaaaaacg atacaaacgt cattattcta gcacttattt taggagcaat
     4861 gattggattt gaccttggtg gacctgtaaa caaagctgct tggatggctg ggaacgcgct
     4921 atttatgagt ggaatttatc taccttcaat catgatcaac gtcgcaattt gcattccgcc
     4981 acttggctac ggaatcgcaa cactattacg caaaaagaat tattctacta cattcaaaga
     5041 agctggaaat ggcgcgctaa tcatgggact aattggggtc acggaaggtg cgattccatt
     5101 tacactacgt agccctggta aattaattcc gctaaatgtg attgcctgcg cgattggtag
     5161 tgccgtaacg atgggacttg gcgcttatgt gaaaatgccg ccgattggtg gaatgtacgg
     5221 tttcttcact attggtaacg gctgggctta cttagttggt ggcttggttg gtgcatttat
     5281 tattggaatt tgtgcgaact tattcgtcaa tttcacagaa gaagaaacag ctgctgcaga
     5341 cgatgctgtg gatgatatcg atattagttt tgatgaaata gagattaaat aatagttgga
     5401 ggatttaatg aaaatggcta aaacgaaagt acacgtaatt ccgcattcgc actgggatag
     5461 agaatggtat ttcacttcaa gccgttcaac aatctattta gtgaagcatt taaaagaagt
     5521 aattgaaaca ttggaagcga aagacgatta ccatttttac ttaatggatg cccaaagctc
     5581 tttaatagaa gattatttgc gctactgccc ggaagataaa acaagattag aaaaactgat
     5641 tgctgaaaaa cggcttatta ccgggccatg gtatacacaa acggaccaat tagtcatttc
     5701 acaagagtcg attgttagaa acttgttata tggtacgaga attgcacgcg aaatgggaca
     5761 tagcatggct gtcggttatg tcccggatgc attcggacaa ggcgggaaca tgccacaaat
     5821 ttataaagaa tttggaattt caaagtttct gttttggcgc ggagttgccg ataatcgctt
     5881 aaaacaaacc gaatttatct ggcgcggtga tgatgggacg gaaatgctag cagagcaaat
     5941 tccgtttggc tattactacg gcgcgaacat tccggaaaac gaagccgaac ttaaaaccta
     6001 tttggatgat caaattggtg ctctggaaga gaaggcctca acgcgaaatg tctatttccc
     6061 aaatggctta gaccaagcgc cagttaggaa aaatttgcca gaattagttg cgaaattcaa
     6121 tgaattagat agcacgcggg aataccaaat cgcatcacca gaaacatttt tcgcggactt
     6181 agaaaaagat gtgaccaatt tgccagtcat tgctggtgaa ctaacagaag gaaaacatag
     6241 tcggctgcac aaatcgattt tctctactcg agctgattta aaacaagcaa acaatgaaat
     6301 cgaaaacttt ttaagtaatg tattagagcc ggttctttcc atcagctact ctcttggaaa
     6361 tcgctatccg cacaatgaac tcgcagaaat ttggaagtta atgtttgaaa atgctgcaca
     6421 tgatagcatt ggcggctgta atagtgatac aaccaaccgc gacgtcaaac atcgttacaa
     6481 attggcttcg gatttagcga ccaatttact cgatttaaac atgcgcctaa tcagcgaaaa
     6541 aatcgaacaa aaacaaccgt tccaatttac cgttttcaac ccactaccat acgaaaaaag
     6601 cggtgtgatt aaaatgaccg cgtatatccc agaagataat ttcgagatag aagatacgca
     6661 aggaaacacg cttgaataca cgattttaga aaaaacagac ctaactgatt acgtcttaaa
     6721 tcaacatatc gacctaaatc ctagcaaatc catttatttg ccagaaaaag tctttttagc
     6781 aacaatgcta gtaaacgtaa atagtcttcc ggcgctaggc tacgacacca tctactttaa
     6841 tttagaaaaa gaaacagcgg agcaagaacc aacacaatcc accatgacaa aaatcgaaaa
     6901 cgaattttat gaaatccagc tagctgccaa caattcactc acgattcatg ataaaaaagc
     6961 gggcagaacc tatacagatc aaatgctttt tgtggaaaat ggcgatgatg gcgattcgta
     7021 taactattcg ccaccacgta aagaccttgt aatctcatcg gaagaagcgg tagtggaaag
     7081 cctagagtct agtatatcaa gcgtcaacca aacattaact atttccttca agttaaatgt
     7141 accgtataat ttagaagaac gtgcaaatgg tgaaaaaagt aacgaaatga ctatcaaaac
     7201 agtaatttct ttacgtaaaa atgaagaact cattcgcttt gatgtacaag ttgctaatca
     7261 agtattgagt catcgtttat gtgttacatt cgccaccgaa attgctagca aattctcaac
     7321 agctgatcaa ttattcgcac caatccagcg tccggttcgt cttccagaaa tggatgtatg
     7381 ggaagcagaa gaatggcaag aagcgccaat ttcgattgaa gctatgcaaa gttttgtcag
     7441 cttacacgat gaagctcatg gggttgctgt aatgacagag ggcgtacgcg aatatgaaat
     7501 cattggcgaa aattacgata cgatctcgct aaccctgttc cgcacattta gccatatggg
     7561 taaaactgat ttactatatc gtcctggtcg cgcttccggt gagtcaatcg ttgcgacacc
     7621 agacgcacaa ctgcttggcg aaataaatgc cacatttgcg ctaactttat tcgaaagctc
     7681 ttttgacgaa gcggatatcg cgaaaaaagc aaaagaatat ctatcgaacc cgccagttta
     7741 ccaaatgtct gattttctaa acggccgctt gatttatgtt taccgcgatg aagaaaaaac
     7801 gctagatgcc acatatagct tggcacttcc gacaatagat ggagcgatta ttagtgcagt
     7861 aaaaaaagcc gaagacgccg atgccttcat tacacgcttt ttcaatccat atttacaaaa
     7921 agaaattacc attccagaag ttttccaagg caaggaacgc cacttggatg aaagcgaatc
     7981 aaacgagaaa caaacgagat taaaacatgc aaaagtacaa agctatttat ttgaaaaata
     8041 acgcttaact acctaaaaaa ggagctgcta ataatgggat atttcgctta taaacgtttg
     8101 gaaacactat atggcatgct ccttgatgcg ggtagccact tatcagctca gaaactcagc
     8161 caagatttac atatttccga acgtacgata cgaacagata ttgctaaact aactgaattt
     8221 ctcgaaagct acggggcaac gataacgcta actcgaggcg cgggatacaa aatcgaaatc
     8281 cttgattcgt tggtttttca agcttttcag gccgaaaaaa acaaaccaaa aaatgcgggt
     8341 tattttgacc ttgataatcc cgaagaacgc gtgaaatacg agattttcat gctgctatca
     8401 agcggcgact atattaaatt ggaagacttg gcagatacga tttttgctag ccgtgcaacc
     8461 atttcaaatg atatgaagca agtacgaaaa gttattgcgg tgtatgattt aacgctcgtc
     8521 tcaaaaccag gtagcggcgt gaaaatcatc ggagaagaag aaaaaatgcg ctatgctcta
     8581 accgcgttaa ttgcttccaa aaacgccccg gaatcctact tagaaacatt tttcgaatgg
     8641 cacaaacaaa aagataaact gcaaaaatta atgacagctg tgacggatta tttttttgcg
     8701 accaacattc gtttcacaga cgaagcgctt caaaacttac ttttacatat gatgattttg
     8761 gtggaacgaa ttgaactcgg tcatacgttg gaaaagtttg aattaacgga tgttagtgaa
     8821 gaagaaatcg cgattgcgac taaattgtct actattatag agtcgctttt cgaaatagac
     8881 attgcggatg cggacaaaaa ttatttgctt ctccaaatcg ccagcaaacg aattctgaat
     8941 gtagaagata aagaaattag cgaatttgat gattacgcgt atattgaagg catgttgaac
     9001 cgcattgagt cccattactt ttatcattta caagatgata tgcagcttaa aaaggacctt
     9061 gttgctcata ttcattccat gttatatcga gtaaaatacc atatgaccgt caaaaatcca
     9121 atgacagagc acattaaacg ctattaccct ttagcctacg aaatcacgct cgatgcagtg
     9181 gaatcactaa aaaaagacta cccgtatgac attaatcaaa atgaattagc ctatttagcg
     9241 ctgcatattg gggcatcctt agagcggaat tatcaaatct cttactatcg tcataaatca
     9301 gccttgattg tttgtgggtc aggctttgga acagcacgaa ttgtagaagc gaaagtaaag
     9361 tcagcagtga gtaatctcga tattacaaaa gtagtttcaa tccaagaata taaccgtttt
     9421 atccatattg aagaagatat cattctctcc accgttagaa tacctgagaa aaataaaccg
     9481 gtcatcaaaa tcagcaatat cccaaccaat gaagaattaa aaatgcttgg tgccattatt
     9541 caagaacaaa ccgatcctaa ccgcggcttt ctatcgaatt ttttcacagc tgattttttt
     9601 gccagaagca gtatgacaaa caaaacagca attttagaag aaatggttga ctcattacgc
     9661 caacaaaata ttgttggtga aggcttcttg caatcggttc ttgaacgtga aaaattaggc
     9721 tcaactgtac tcggaaccgg aatagcaatc ccacatccac tcggactaat ggccaaagaa
     9781 acaaaaatcg ttattcggat attagataaa ccaatcaaat gggatcaaaa acaatccgtt
     9841 cgcgccgtat ttttattatg tattagcaaa aatgattatg aagaagccat taatatttat
     9901 gaattgctag tagaattagt acgcgaagaa tatggtgaga agctttcaag gctttccgac
     9961 tttcatgcat tcactgcttt agcaaatgat attttgaaga aaaaataaaa gctacttcct
    10021 tttttaggaa gtggtttttt cgtgaatttt tcgtgaattt taccattttt cgtttagtga
    10081 taggttattt catggtacac tataagaata ataactaaat atatggagga tttaatgaac
    10141 agacaaacag aatttacatt acttattgtg ggggcttcat taagcatttt aacttttcta
    10201 ggtgctatgt tgtataccat tatttttgga cttaataccc taatggtagc tgatactttt
    10261 ggttattata gtagctcaga agaaacgatt gtacttggga taattacttt cttttcagta
    10321 gttgctgcat tttttgcact cggatcagca gtttttggat ttatcggtgc atttaaagtc
    10381 aaaagtgacg ggccaaaagt aaaaacatta ggcgtttgtt ttatcgtttt gggtggattg
    10441 caagtattta ctattcacgg aattttattt ttgattgcag gaattttaac aattacaaaa
    10501 aaagaataca aaacaaattc taaagaagat gaggggacaa aatgggaatg ataacgttct
    10561 taccaatatt ttttattttt gcgatttttt taggactagc agcaaaagtc cttttagcaa
    10621 tttggattta taaagatgct gaacaacgcg gaatgaacgc aattctttgg tgtctgttaa
    10681 tggttttcat taatgtcatt attattcttg ttatttacct gatcgtacgt aataaaggag
    10741 aagtcatgaa gcaaaattta ggactactaa ttagtggtat tggtattgcg gtactaaata
    10801 cattaatggc gattatggct tttattttta taatcttttt tgcggtgaat gatggtggaa
    10861 tgcataatat gatggacggt tataactatg attatgacga cgggtacgag tacgatatgg
    10921 ataattttga agatttttaa taacaccaac gagaatctgc tacctaatac aggagcagat
    10981 tctttttata tttctataaa aggggtatag acaataaaaa agtgaatatc gacaagggga
    11041 actgctgaat ggatacggtt attttaatta cggttattat cgttataatg ggcttagcat
    11101 ttgattttat aaatggattt catgatattg caaatgctgt ggccacaagt atttcaacta
    11161 gagctttaaa accgcgagtg gcaattggaa ttgcggcagt catgaatttt ctgggagcca
    11221 tttcgtttac cggagtagct gaatcgctca ccaaaagtat tgtagatcca ttttcgctta
    11281 ataatggaga gtttgtcgtt ttatgcggct taattgcggc agtgatttgg aatttgatga
    11341 cttggcttgt tggcatgcct agtagttcct cgcatgcgct tatcggtgcg atagctgggg
    11401 cctccatcgc atcagccagt agttttagcg tgcttaattg gtcaggattt acaactatta
    11461 ttattgcact cattatctcg ccgattatcg gttttacagt aggttatttg atttattcac
    11521 tctttaagca tctttttcac gacaaaaagc ttgggaagat gaatcgacgc tttcgtttta
    11581 tccaaattgg aacagctgcc gcccaagcat attcacacgg cacaaatgat gcccaaaaaa
    11641 cgatgggaat tatcacgctt gctttagttg cgagtgggct tttgaaagag tcagctggta
    11701 ttcctttttg ggtgcaagta agttgtgcgg catcgatggc gattggatcg tctgttggtg
    11761 gttatcgaat catcaaaaca gtaggaacta aaatcatgaa aatcacccca gttacaggtg
    11821 ttgcgtccga tttaagctca ctttctgtaa tcatgacagc tactttgatt catttgccag
    11881 tcagcactac gcaagttatt gacagctcga ttatgggtgt cggaacagct aaccataaaa
    11941 aagaagtcaa ttggcgtacg gggaaaaata tggttgtaac ttggtttatc acgttaccac
    12001 tagctggact tttagcggca gtggtatact ggatatcagc agctattttt ttataataag
    12061 gaggatttta aatgaaaata gaacatgttg cattatggac aactaattta gaacaaatga
    12121 agcaatttta cgtcacttat tttggtgcaa cggccaatga tttatatgaa aacaaaacaa
    12181 aaggcttcac ttcttacttt ctttcgtttg aagacggagc aagacttgaa attatgagtc
    12241 ggacggatgt aacaggaata acaactgggg aaaacttagg ctgggcgcac atcgctattt
    12301 caacaggaac aaaagaagca gtagatgagc taactgaaaa actaagacaa gatggttttg
    12361 caattgcggg tgaaccaaga atgacaggag acggatacta cgaaagtgtc gtgctagacc
    12421 cagaaggcaa tcgcatcgaa attacgtggt agtattgatt tgctaggaac ttagttatcg
    12481 tgtaatatac ggggtacata ctacaaatga ggtgaatttt atggatatcg taactaataa
    12541 aattgtcgta gaaaagtata attttgaaac aatcatggaa gaaaatgagc aattcgaaaa
    12601 caaaattgaa ttagaggtcc atgaagtcga gccagtcaat ggaaatgtgg aacttatgtc
    12661 aaaaggaaaa atttttaaaa tcacaattcc ttttttatta gtccttgaaa atttccggat
    12721 tgacggtaga atcagccgta ttattcaatt aaaagacttt tttggagatt tttccgattt
    12781 agaagctgta gatgttgaag gcttatccaa tccactaatt gactacatca aacgcttaac
    12841 atatgatgta acagaaatcg catttgatga accgggagtt agcttggatt ttaacgctaa
    12901 tcataatagc tagttaggag agaaaatgcg tcaatatatg aaaatggtac gtccgtttga
    12961 ttttgtaatt attattttac taatcttggg ttcgttttta ccactaatat tattttctgt
    13021 cgctgaagca aagcacgtgg gcgatgatgt cgtagcagtt atttcacaag atggcaaagt
    13081 ggttcgggaa atcccgctaa ctgggcacaa aggaaatgag cagtttacga ttaaaggaaa
    13141 aggcgcgcaa tataatttga tggaagtaga tggcgagcgg attcgaataa aagaagacaa
    13201 cagtccagac caagtaggcg tcaaaatggg ctggaaatcc aaagccggtg acaccattgt
    13261 ttgtttacca cataaagttt tcgtagagat aaaatcgaca aacaaaaaaa gcaaagaccc
    13321 cgatacagat ttaattgtgc cgaattaaaa cacactaagc gattagtgtg tttttttgtt
    13381 tgaaccaact aatttaaaaa ttattgtcaa atttatgtca cgtgttttca tggttgctac
    13441 ttaggtatct aagaaacaaa aataagaagc ggaaatttgc atattaaaat tagacaacta
    13501 cttca
//
LOCUS       DASDYK010000075        13440 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.075, whole genome shotgun sequence.
ACCESSION   DASDYK010000075 DASDYK010000000
VERSION     DASDYK010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13440
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.075"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            33..377
                     /locus_tag="U0308_002029"
     CDS             33..377
                     /locus_tag="U0308_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3899 domain-containing protein"
                     /protein_id="HEM2316990.1"
                     /translation="MFLRITIYTLIQEAIIFGILLFGKNQSVSLNNYVDISFMVALIA
                     LLIGLFVYIMRSGFLDRVHNGFRSISRKIKREEENEFSDMPLSELVGLRYAGILFSSL
                     LVMLSSILCMFL"
     misc_binding    422..648
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            713..1708
                     /gene="trpS"
                     /locus_tag="U0308_002030"
     CDS             713..1708
                     /gene="trpS"
                     /locus_tag="U0308_002030"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEM2316991.1"
                     /translation="MKKVIFSGIQPSGQLTLGNYIGALKQFGQFQDEYECFYCIVDEH
                     AITVPQDRLKLREQTRSLAALYLAVGLDPEKATLFIQSEVAAHAQAAWILQCNVYIGE
                     LERMTQFKDKSDGKAGVSAGLLTYPPLMAADILLYQTDLVPVGEDQKQHIELTRDLAE
                     RFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSDANLKNAIFLLDPPATIRKKI
                     KSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITGETISTIEEKYVGKGYGDFKTDLAEL
                     VVAELEPIQERYYAYLKSEELDTILDAGAEKAARVANKTLKKMENGVGLGRKRRR"
     gene            complement(1764..2180)
                     /locus_tag="U0308_002031"
     CDS             complement(1764..2180)
                     /locus_tag="U0308_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic hydroperoxide resistance protein"
                     /protein_id="HEM2316992.1"
                     /translation="MKKLYETTVINTGGRSGEVHSPDNVFYFDISAPTELGGDGGGGT
                     NPEQLFAAGYGACFNSALELVLGKAGIEAKSTVTATVSLYSDPEDNGFKIGVVLEGTI
                     EGQDKEKTEALLKKAHEVCPYSKATRGNIDVEIKVG"
     gene            complement(2164..2616)
                     /locus_tag="U0308_002032"
     CDS             complement(2164..2616)
                     /locus_tag="U0308_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2316993.1"
                     /translation="MDTNTRILEEQLCFSVYNASKQFTKLYREALEPFQLTYPQYIAL
                     LVLWEVEEQTVSELGKRLALDSGTLTPMLKRMEHLGYVTRSRHPEDERRVYIRLTEKA
                     IKIQPDVLKSVDNCLQLLDFKELDYTQLLTKIQSLTKQLGGIENEKII"
     gene            complement(2738..3979)
                     /gene="fabF"
                     /locus_tag="U0308_002033"
     CDS             complement(2738..3979)
                     /gene="fabF"
                     /locus_tag="U0308_002033"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEM2316994.1"
                     /translation="MDKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPD
                     DFPVKIAAELKDFDVEKYLEKKEARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVG
                     VWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTT
                     VTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETA
                     CRPFDKDRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNG
                     EGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGDHAKKLAISST
                     KSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPNEAREANVNVV
                     ISNSFGFGGHNATLVFKRIED"
     gene            complement(4182..5120)
                     /gene="fabH"
                     /locus_tag="U0308_002034"
     CDS             complement(4182..5120)
                     /gene="fabH"
                     /locus_tag="U0308_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP synthase III FabH"
                     /protein_id="HEM2316995.1"
                     /translation="MNAGILGVGKYVPEKIVTNFDLEKIMDTSDEWIRTRTGIEERRI
                     ARDDEYTHDLAYEAAKVAIKNAGLTPDDIDLFIVATVTQEATFPSVANIIQDRLGAKN
                     AAGMDVEAACAGFTFGVVTAAQFIKTGAYKNIVVVGADKLSKITNWDDRTTAVLFGDG
                     AGAVVMGPVSDDHGLLSFDLGSDGSGGKYLNLDENKKIYMNGREVFRFAVRQMGEASL
                     RVLERAGLEKEDLDLLIPHQANIRIMEASRERLNLPEEKLMKTVHKYGNTSSSSIALA
                     LVDAVEEGRIKDNDNVLLVGFGGGLTWGALIIRWGK"
     gene            complement(5240..6367)
                     /locus_tag="U0308_002035"
     CDS             complement(5240..6367)
                     /locus_tag="U0308_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2316996.1"
                     /translation="MDRKCQLIMKKKFTQILLASVIVSSTLVPFVQAEAAGTSQTSVS
                     HAGMTLSQQQFIQSIANDAQDLQKEEKILTSVTLAQAILESNWGKSGLSTSANNLFGI
                     KGSYEGNSVSMGTQEFSSGKAYRTQADFRKYPDKKASLVDHAQLFVNGVSGNANLYSA
                     VIGETNYKEAAYAIQDAGYATDPAYAEKLISTIENYNLDQYDQIYDTVTSTENQLAYA
                     EIKDSSNETIWTKPYNTEGAEKIGSVKDYKNKSLRISQKAVTEKGTWYQLLNQGETIG
                     WVNSNAVEVFYTPKNETNVKLDKYITDSDQKIYAYPVEDNSKVVKNLNDYLGKELDID
                     RRADVKNEYWYRIKSDDGKVIGWSKADGFAENNPNKALEVK"
     gene            6690..6878
                     /locus_tag="U0308_002036"
     CDS             6690..6878
                     /locus_tag="U0308_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjzD family protein"
                     /protein_id="HEM2316997.1"
                     /translation="MRYVVTVVWVFLLSLMAEFVLSSMLYVSFDMTRAIILTVGLSFF
                     IILITFLMPKDSEVYDFK"
     gene            complement(6968..7657)
                     /gene="gpmA"
                     /locus_tag="U0308_002037"
     CDS             complement(6968..7657)
                     /gene="gpmA"
                     /locus_tag="U0308_002037"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEM2316998.1"
                     /translation="MKLVLIRHGQSEWNKLNLFTGWHDVDLSQEGVVEAMTAGKRIKE
                     AGLEFDVAFTSVLTRAIKTLNYVLEESDQMWVPVHKSWRLNERHYGALQGLNKQETAE
                     KYGADQVQKWRRSYDTLPPLLEENDERQAKNDRRYQLLDTHAIPAGENLKVTLERVIP
                     YWMDTIAPEIKEGRRVVIAAHGNSLRALVKFLEGIGDDEIMDLEIPTGVPLVYELNDD
                     LKPVNKYYLDK"
     gene            complement(7748..10348)
                     /gene="clpB"
                     /locus_tag="U0308_002038"
     CDS             complement(7748..10348)
                     /gene="clpB"
                     /locus_tag="U0308_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEM2316999.1"
                     /translation="MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESDF
                     AKRVYDVAEVDIDALQKTVEDALTKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQL
                     DDDFVSTEHLILAVMDQKSNPITMNLKKQHKSKKQIQEAILKIRGGKKVTSQNAEENY
                     EALTKYGRDLVAEVRSGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIV
                     EGLAQRIVRKDVPEGLKDKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQIL
                     LFIDEIHTIVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERR
                     FQKVLVPEPTVEDTVSILRGLKERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKA
                     IDLVDEACATIRVEIDSMPSELDEVTRKVMQLEIEEAALKEEKDPASERRLEILQREL
                     ADYKEEANQMKSKWESEKNEISKIREVREQIDHLRHELEEAENNYDLNKAAELRHGKI
                     PAVEKELLELEAENREKTAQEDRILQEEVTENEIAEIVGRWTGIPVTKLVEGEREKLL
                     KLADELHQKVIGQDDAVQLVSDAVLRARAGIKDPKRPIGSFIFLGPTGVGKTELAKAL
                     AFNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEAVRRNPYSIVLL
                     DEIEKAHPDVFNILLQVLDDGRITDSQGRLIDFKNTVIIMTSNIGSNLLLERTEEGEI
                     SPELESDVMQILQSEFKPEFLNRVDDIILFKPLTLADIKGIVEKLVEELQIRLADQEI
                     TITISDNAKAFIAEEAYDPVYGARPLKRYIVRHVETPLAREIVSGKIMPHSSVEIDLA
                     DKEFTFKVTE"
     gene            complement(10496..11173)
                     /locus_tag="U0308_002039"
     CDS             complement(10496..11173)
                     /locus_tag="U0308_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEM2317000.1"
                     /translation="MNEINHTSERANTEKRTEKQIIMQKILNWFVFSLLLASIGAAIG
                     SKLSPELYLPLVVLEVALLITAMVVRRSKTINKVVGYPVVLAFAFVTGLTLGPTLTYY
                     FGAGQGAAVLMAFVTATVTFTTLAFIGAKMKKDLSFLSSALFAAIIILVIFSFVGVFL
                     PLGSMLSTIISAGGTIIFSLYILYDFNQIMKRDVELADVPMLALNLYLDFLNLFMFLL
                     RLFTGRD"
     gene            complement(11285..12055)
                     /locus_tag="U0308_002040"
     CDS             complement(11285..12055)
                     /locus_tag="U0308_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2317001.1"
                     /translation="MKPRGICFFDMDGTLLNSESKVLDTSLQALDKLRENNVIPVIAT
                     GRTLIEISHQMKITGIESAVMMNGQMAIFEGEKVYEDVIDADLLARLTEEAKSQNVEV
                     CYYNDKRIGATASTPVVKAHYDFLGEPMPEVRPNMYKEENINMALLLLETGDDYFPER
                     FPELQFVRNTPFSNDVLRKGGSKAVGISKLLEVMGYQDVPTYAFGDGMNDLEMFGAVD
                     YAIAMENAVPLLKEKATFVTKDNNSDGIMLGLKQFDLI"
     gene            complement(12119..12904)
                     /locus_tag="U0308_002041"
     CDS             complement(12119..12904)
                     /locus_tag="U0308_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2317002.1"
                     /translation="MIRKLTVSDNEEVMALLKPEATLNLFIIGDIENFGYESDVQDLW
                     GEFDSEDKLHALLLRFDTFFLPYSKDANFDAKAFSEIIAKHDTYEVSGISRVTKELEP
                     FLPELAEKRQDTYFCECEHVNRISVNQDVIVRTAVAEDVAPIIKMRKHIKEFGSRDEN
                     EELIIRQIEKGVKRIYYIEQDQEVVAVAETSAENSFSAMITGVATSDGYRQRGFASTL
                     LKKLCCDVLAEGKKPCLFYDNPVAGEIYHRLGFEHTGDFVMYK"
     gene            complement(13025..13369)
                     /locus_tag="U0308_002042"
     CDS             complement(13025..13369)
                     /locus_tag="U0308_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317003.1"
                     /translation="MKNKAEKQRIATNLSLYMKINGYTHRTFALAVGISQNTLKALMI
                     GKMRNENKFQKYISQITESLALEEKFFEQPKEAITAAPITFQDTNKMHLGDEKFNAIS
                     LMLKIGEIHYES"
BASE COUNT         3821 a         2642 c         2262 g         4715 t
ORIGIN      
        1 gtgaattatg aattttaatt agaggtgaag aaatgttttt acgaattact atttatacac
       61 ttattcaaga agctattatt tttggtattt tacttttcgg aaaaaatcag agtgttagtt
      121 taaacaacta tgtggatatt tcctttatgg tagcacttat cgcgctccta attggattgt
      181 ttgtttatat tatgagaagt gggtttttag accgcgttca taatggtttt cgaagtattt
      241 ctcgcaaaat taaacgagaa gaagaaaatg agttttcaga tatgccttta tctgaattag
      301 tcggtcttcg atacgctggg attttgttta gttccctact tgttatgcta tctagtattc
      361 tatgtatgtt tttgtaattg acaagccgtt ttgtaaactg atagaataaa agtaatataa
      421 ctgatgcgtt aataggaaga ttagtacatt ttgttgcttt ataatagaga gtctgtggtt
      481 ggtggaaaca gataaagcgc aaaatcgaat ggacttctaa ggactgtttg tgaaagccag
      541 tagcgaacag cggctaaaga ccgttacttc tttatataga aattttctat tgctaagagc
      601 ctttttaggt acttagggtg gcaccgcgga taaccgttcg tccctaacat ttatatgttg
      661 ggatggacgg ttttttattt tcgctatcag tgaaaaaatt ggaggaataa acatgaaaaa
      721 agtaatattt tccggaattc aacctagtgg acaattaact ttaggaaatt atattggagc
      781 tttgaaacag tttggtcagt ttcaagatga atatgaatgt ttttattgta tcgttgacga
      841 acacgctatt acggttccac aagatagatt aaagcttcgt gagcaaacaa gaagtttagc
      901 agctctttat ttagcagttg gactggatcc tgaaaaagcg actcttttta ttcaatctga
      961 agttgcagca catgctcaag cagcatggat tttacaatgt aacgtatata ttggcgaatt
     1021 agaacgtatg acgcagttca aagataaatc agatgggaaa gcaggtgtca gtgctggcct
     1081 tttaacttac ccaccattga tggcagctga tattttactt tatcaaaccg atttagttcc
     1141 tgttggcgag gatcagaagc aacatatcga attaactcgc gacttagcag aacgatttaa
     1201 taaaaagcac gcagatattt tcacgatgcc agaagtattc attcctaaac aaggcgcacg
     1261 agtaatgtcc ttacaagatc caacgaaaaa aatgagtaaa tctgatgcca atttgaaaaa
     1321 tgctatcttt ttacttgacc caccagctac cattagaaaa aaaatcaaaa gcgctgtaac
     1381 cgattctagt ggtattattg aatataataa agaagaaaaa ccaggtgtgt ctaacttact
     1441 aactatctat tctgttatca ctggcgaaac aatttctact atagaagaaa aatatgttgg
     1501 aaaaggttat ggcgatttta aaacagattt agctgaatta gttgttgctg aacttgagcc
     1561 aattcaagaa aggtactatg cttatctaaa atctgaggag ctggacacta tattagacgc
     1621 aggagcagaa aaagctgctc gcgtggctaa taaaacattg aagaaaatgg aaaatggcgt
     1681 ggggcttggc cgcaaacgca gaagataata taaaaaagcc aatgactagt tgatctaagt
     1741 cattggcttt ttttatttaa acattaacct actttaattt ccacatcgat gttaccacga
     1801 gttgctttag aatatggaca aacttcatgt gcttttttaa gtagtgcttc tgttttttct
     1861 ttatcttgtc cttcgatagt tccttctaat acgacaccaa ttttaaaacc gttgtcttct
     1921 ggatcactat ataagctgac agttgctgtt actgtgctct ttgcttcaat cccagctttt
     1981 cctagaacta attctaacgc gctattgaaa caagctccgt atccagccgc aaatagttgt
     2041 tctgggtttg ttccaccacc gccgtctcca ccaagttctg ttggcgcaga aatatcaaag
     2101 taaaatacgt tgtctggcga atgaacttca ccacttcttc cacctgtatt aatgactgtt
     2161 gtttcatata attttttcat tttctattcc tcctaattgt ttcgttaacg attgtatttt
     2221 ggtaagtaat tgtgtgtagt ctaattcttt gaaatcaagt aattgaaggc agttgtccac
     2281 gctttttaat acgtcaggtt gtatttttat tgctttttct gttaagcgaa tataaacgcg
     2341 gcgctcgtct tccggatgac gactccgtgt aacatatcct aaatgctcca ttcgttttaa
     2401 cataggtgtt aaagttccac tatctaaagc caacctcttc ccaagttctg atacagtttg
     2461 ttcttcaact tcccatagaa caagcaaagc aatatattgt ggataggtta attgaaacgg
     2521 ctctaaagct tcacgataaa gtttagtaaa ttgtttggat gcattataaa cagaaaaaca
     2581 tagttgctct tctaatatgc gtgtattcgt gtccaacatg ttctcctcct tttaagttgt
     2641 gtacaattta attgtaacca atcataataa tgaaagctag ttttttgctc aaaaaaagcc
     2701 ttacctcatt tttagaggta aggcttttga ttatatttta gtcttctatt cttttaaata
     2761 ctaaagtcgc attgtgacca ccaaagccaa aagagttaga aattactaca tttacatttg
     2821 cctcacgtgc ttcatttgga acataatcca agtcacaaac ttcatcttgg tttttcaaat
     2881 gaatcgttgg tgcaataata ttatcacgaa tagtcaatag ggcgaaaata gcttctattc
     2941 cgccagacgc acctagagta tgtccagtca ttgacttagt agaactaatc gctaattttt
     3001 tcgcatgatc tccaaagaca gttttaatag cttgtgtttc gtattcatca ttgtacggtg
     3061 tacttgttcc gtgggcatta atataatcta ctttatcagg ggtaaggcca gcatcatcaa
     3121 tcgccatttt cattgcgcgc gcagcacctt caccgtttgg agctggagca gtaatgtggt
     3181 aagcatctcc tgttgcaccg taaccaacga tttcagcgta aatttttgcc ccacgtgctt
     3241 ttgcatgttc gtattcttct aaaataacga tacctgcgcc ttcaccaata ataaaaccat
     3301 cacgatcttt atcaaacgga cggcatgcag tttctggatc tggatttaat gacaaagctt
     3361 tattagcagt aaaaccagca agtgacattt tagtaatcgg cgcttctgct ccaccagtaa
     3421 tcattgcatc agcgtctcca cgctcaataa ctttaaacgc gtcgccgatt gagtttgttg
     3481 cagttgcaca agctgtaact gttgtagaat taatgccttt agcaccaaaa cgaatagaaa
     3541 cctggcctga acccatatct ggaatcatca taggtacgaa aaacgggcta actcggcgat
     3601 gaccgcgatt taagaaaatt tcatattgtg tttcgaaagt ttccattcca ccaattcctg
     3661 aaccaatcca aacaccaact cggtttgcat tggaatcatc aataactaaa ccagagtctt
     3721 gcacggccat ttcagcactt gcaattgcat aatgcgtaaa acggtccatt ttacgagctt
     3781 cttttttttc tagatatttt tctacatcaa aatcttttaa ttctgctgca attttaaccg
     3841 gaaagtcatc cggattaagt cttgtcattt ttgcaacacc attaacacct ttttttgcgt
     3901 tttcccaaga agtttccgca tcatttccaa taggtgtaac agctccaata ccagtaacaa
     3961 ctactcttct cttatccatt tactcatctc cttattttgc gattcataaa aaacaacttc
     4021 tgtccaatga cagcagctag tataaagtta aggctttatt taaaattaat aatagtgcac
     4081 aaacaaataa accaaaagcc tgttccatta taacataaat aaaggaaagt tgtcctaact
     4141 aaaataatcg ttagggcaac tttccttttt aaatttactg cttacttacc ccaacgaatg
     4201 attagggcgc cccatgttag tccgccgcca aaacctacga gcagaacgtt atcattatct
     4261 ttaatacgtc cttcttccac tgcatcaacg agcgcaagtg cgattgaaga ggacgaagta
     4321 ttaccatatt tgtgtactgt tttcatcagt ttttcttctg gtaaattcaa acgctcacga
     4381 gaagcttcca taatacgaat atttgcttgg tgaggaatta gtaagtccaa gtcttctttc
     4441 tcaagaccag cacgttcaag tactcgtagt gaagcttctc ccatttggcg aactgcaaag
     4501 cggaatactt cacgaccgtt catataaatc tttttatttt catctaaatt caagtattta
     4561 ccacctgatc catctgaacc taagtcaaat gaaagtaaac catgatcatc agaaactggt
     4621 cccataacta cagcacctgc tccatcaccg aataatactg ctgttgtgcg atcatcccag
     4681 ttagtgattt tagataattt atccgcaccg acaaccacga tatttttata tgcacctgtt
     4741 ttaatgaatt gtgctgcagt cactactcca aaagtgaaac cagcacaagc tgcctcaacg
     4801 tccataccag cagcgttttt tgctcctaag cggtcttgga taatattagc aactgaagga
     4861 aatgtcgctt cttgtgtaac agttgcaacg ataaacaagt caatatcatc tggtgtaaga
     4921 ccagcattct taatggctac ctttgctgct tcatatgcta aatcatgcgt atattcgtca
     4981 tcacgagcaa ttcttctttc ctcaatacca gttcgagttc taatccactc atcagatgta
     5041 tccataattt tttctaaatc aaagttagtt actatttttt caggtacgta tttacctact
     5101 cctaaaattc ctgcgttcat gtgttctcct ccatatcaaa ctacatcagg gtgaaaataa
     5161 attttctcct ggttattttt atgacctggt gctaatttta acagagaact atcaattaag
     5221 caattggatt gctacttttt tattttactt ctaacgcttt attaggattg ttttcagcaa
     5281 aaccgtctgc ttttgaccag ccgattactt tcccatcgtc tgacttaata cggtaccaat
     5341 attcattttt cacatctgca cgacggtcaa tatctaattc tttccctaga taatcattaa
     5401 gatttttgac tacttttgaa ttatcttcta ctgggtaagc atagattttt tgatccgaat
     5461 cggtgatata tttatctagt ttcacatttg tttcattttt cggggtataa aaaacttcta
     5521 cagcattact gtttacccat ccaatagttt cgccttgatt tagaagctga taccatgttc
     5581 ctttttctgt gacagctttt tgagaaattc gaaggctttt atttttgtaa tctttgacgc
     5641 tacctatttt ttctgcgccc tctgtattat atggttttgt ccaaattgtt tcattgctag
     5701 aatctttaat ttccgcatat gctaattggt tttctgttga tgtcactgta tcgtaaattt
     5761 ggtcatattg atccaaattg taattttcaa tagttgaaat gagtttttct gcgtatgctg
     5821 ggtcagttgc ataacctgca tcttgaattg cgtatgctgc ttccttatag tttgtttctc
     5881 cgatgaccgc tgagtaaaga tttgcattac cagatactcc gttaacaaaa agttgggcat
     5941 gatcgactaa agatgctttt ttgtctggat actttctgaa atcagcttgt gtgcggtagg
     6001 ctttcccgct gctaaattct tgcgttccca ttgaaacgga atttccttca tagcttcctt
     6061 taattccaaa caggttgtta gctgaagttg ataagccact tttaccccaa ttggattcta
     6121 gaatagcttg tgctaaagtg acactcgtca atattttttc ttctttttgt agatcttgtg
     6181 catcatttgc tatggattgt ataaattgtt gttgtgataa agtcattcct gcgtgactta
     6241 ctgaagtttg gctcgttcct gctgcctccg cttgaacaaa aggtactagt gtagaactta
     6301 cgatgacgct tgctagtaaa atctgcgtga atttcttttt cattatcagt tggcacttcc
     6361 tatccaaatt agttagttcc cccaatttaa atggctctgt ctctgttaac cttcttcatt
     6421 ctagcatttt cattctgaga gcctactaat tttttgatga aaaatttatc ataaagtaag
     6481 caaaatggct attttagagg gttcacacat acctatttac atttgacaat attatgtcgt
     6541 tacacattta ccccttaata ctactattct tcgttgaagt ttcatttcct tccttttttt
     6601 gataatcgca ttttcaaatg atatatgatt ggataatcta attttatgtg ctaaaatgta
     6661 taatgaaata gatgaaatgg ggtgtaagga tgcgttatgt ggtaactgta gtttgggtat
     6721 tcttactttc tttaatggca gaattcgttc tttcttccat gttatatgta tcatttgata
     6781 tgacgcgggc tattatttta acagtagggt tatccttctt cattatttta atcactttct
     6841 tgatgcctaa agatagcgaa gtttatgact ttaagtaaac atccaacttt ctgatagcga
     6901 gaactgactt ttcaggtgca gttcaaaaaa agaagctctt tccaatatat tggaaagagc
     6961 ttctttttta tttatccaag taatatttat ttactggttt taaatcatcg tttaattcat
     7021 atactagtgg cacgcctgtc ggaatttcta aatccattat ttcatcatcg ccaatacctt
     7081 ctagaaattt cactaatgct cgtaaactgt taccatgcgc cgcgatgact actcgccgtc
     7141 cttctttaat ttctggagca atcgtgtcca tccaataagg aataacgcgt tctaatgtta
     7201 ctttcaagtt ttcacctgcc ggaatagcgt gtgtatcaag gagttgataa cggcgatcat
     7261 ttttggcttg tctttcgtcg ttttcttcta gtaatggtgg aagagtatca tagcttctgc
     7321 gccatttttg tacttggtca gcaccatatt tttcagcagt ctcttgtttg ttaagacctt
     7381 gaagtgcgcc ataatgccgt tcgttcaagc gccaagattt atgaactggt acccacattt
     7441 ggtcagattc ttctaacaca taattaagtg ttttaatagc tcgcgttaaa acagaagtga
     7501 aggcaacatc gaattctaag cccgcttctt taattctttt tcctgcagtc attgcttcta
     7561 caacgccttc ttgtgacaag tcaacatcat gccaacctgt aaataaattc aatttgttcc
     7621 attcactttg accatgacga attaatacta atttcatctt cctcatcctt ccattttcgt
     7681 ctattatcta aacgactaat ccaaccaaag ttttcccttt caagcgaggt gtcaaacctt
     7741 ttctatgtta ttctgtgact ttaaaagtaa attctttatc tgctaaatca atttctacag
     7801 atgaatgtgg catgatttta cctgatacaa tttctctagc aagtggcgtt tcaacatgac
     7861 gcacaatata gcgtttaagt ggtcgtgcgc catataccgg atcatatgct tcttccgcaa
     7921 taaatgcttt tgcattatcg gaaatagtaa tcgtaatttc ttggtcggct aaacggattt
     7981 gaagttcttc tactaatttc tccacaatgc ctttaatatc agctagtgtt agtggtttaa
     8041 atagaataat atcatctacg cggtttaaga attccggttt gaattcactt tgtaaaattt
     8101 gcattacatc cgattctaat tccggtgaaa tttcgccttc ttcggttctt tcaagtaata
     8161 aattagagcc aatatttgac gtcataataa ttactgtatt tttaaaatca attaatcgac
     8221 cttgtgaatc tgtgatacgt ccatcatcaa gtacttgtaa tagtatgtta aatacatctg
     8281 gatgagcttt ttctatttca tcaagtagga cgattgaata aggatttcgt cttacagctt
     8341 cagtaagttg accgccttct tcatagccaa catagcctgg aggagctccg acaagtcttg
     8401 atacggaatg tttctccatg tattcagaca tatcaattcg aatcatatga tcttctgaat
     8461 caaacatatt aaatgcgagt gctttggcaa gttctgtttt accaacacct gttggcccta
     8521 ggaaaatgaa tgagccaatt gggcgtttcg gatctttaat accagcgcgt gcacgaagta
     8581 cagcatcact aactaattga acagcgtcat cttgaccaat tactttttga tgaagttcat
     8641 ctgctaattt aagcagtttt tcgcgttctc cttctactaa cttggtcact ggaattcctg
     8701 tccaacgtcc gacgatttct gcaatttcat tttctgttac ttcttcttgt aaaatccggt
     8761 cttcttgtgc agttttttcg cgattttctg cttctaactc tagtaattct ttttccacag
     8821 ccgggatttt accgtgtcgt aattctgctg ctttatttaa atcataatta ttttctgctt
     8881 cttctaattc atgacgcaaa tgatcgattt gttctcggac ctcacgaatt ttactaattt
     8941 cgtttttctc agattcccat ttcgatttca tttgattggc ttcttctttg tagtcagcta
     9001 gttcgcgttg caatatttct aaacggcgtt cactcgctgg atctttttct tcttttaaag
     9061 ccgcttcctc aatttctaat tgcattactt ttctcgttac ttcgtcgagt tcacttggca
     9121 tcgagtcaat ttcgacacga atagttgcgc atgcttcatc tactaagtcg attgctttat
     9181 ctggtaagaa gcggtccgta atataacgat tagaaagact cgctgctgca actaaagcat
     9241 tatcatgaat atttacccca tgatgaattt caaagcgttc ttttaaccca cgtaaaatgg
     9301 atactgtatc ttccactgtt ggttctggga caagtacttt ttggaaacgt ctttcgagtg
     9361 cggcatcttt ttcaatatat tggcggtatt catctaacgt agttgcgccg atacagtgta
     9421 gttcaccgcg ggcaagcatc ggttttaaca tatttccggc gtccattgcg ccatctgttt
     9481 tacctgcgcc gacaatcgta tgaatttcat caataaatag taaaatttga ccgtcacttt
     9541 gtttcacttc ttgaagtact gctttcaaac gttcttcaaa ttcaccgcga tatttagctc
     9601 cagcaataag ggaaccgata tcaagcgaga taatcgtttt atctttcagc ccttctggaa
     9661 cgtcttttcg aacgattcgt tgtgctaaac cttcgacaat ggctgtttta ccaacgcctg
     9721 gttcacctat cagaactgga ttattttttg tttttctaga taaaattcgg ataacgttac
     9781 gaatttctgc atcgcgtccg attactggat cgagtttacc acttctaact tccgcgacta
     9841 aatcacgtcc atattttgtt aaggcttcat agttttcttc tgcattttga gaagtcactt
     9901 ttttccctcc tctgattttt aaaatagctt cttgaatttg ttttttagat ttatgttgtt
     9961 tttttagatt cattgttatt ggatttgatt tttgatccat gacagctaag attagatgtt
    10021 ctgttgatac aaaatcatcg tctaattgtt tttgttcttt ttcggcatcc cgcatcaact
    10081 gaaaaagtgc ttggctcatt gcttgaccat agtttacacc gcttccagag accacaggaa
    10141 tttttgttaa agcatcttct actgtttttt gaagtgcatc tatatctact tctgctacat
    10201 catatacacg tttggcaaaa tcactctctg ttaataacac tttaaaaaca tgagcgacgt
    10261 cgatttcttg atgttcggat gcaattgcta aattttgagc gtccgcaatt gtttgctgga
    10321 cttgttgcgt aaatttttgt aaatccattc attcgtcctc cttataaaag ataagtctga
    10381 ccttttttga ccttaacttt attatagttt tttatcttgc ttttgtctaa caaaaaccat
    10441 cttttttata gaaaaagatc tgccaatttt taggttggca gatcttctga atttcttaat
    10501 cacgacctgt aaataggcgg agtaagaaca tgaataagtt aaggaaatca aggtataaat
    10561 tcagcgcaag cattggtaca tctgctaatt ccacatcgcg cttcatgatt tggttgaagt
    10621 catacaaaat atatagtgag aaaataatcg ttccgcctgc tgaaataatt gttgatagca
    10681 tagaacctaa tggtaaaaag actcctacaa agctaaatat aacgagaata ataatcgcag
    10741 cgaataaagc actgcttaag aaagataagt cttttttcat ttttgcgcca ataaaagcta
    10801 gcgttgtgaa agtaacggtt gctgtaacaa atgccattag aacggcggca ccttgccctg
    10861 caccaaaata atatgtcaaa gttggtccaa gcgttaagcc tgtgacaaac gcaaatgcta
    10921 gtactactgg gtatcctacc actttattaa tagttttact tcgacgcact accatcgctg
    10981 tgataagtaa cgcgacttct aagacgacaa gaggcaaata aagttctgga cttaatttac
    11041 tcccaatcgc agcaccgata gatgcaagta gcaaagaaaa tacaaaccaa ttaagtattt
    11101 tttgcataat aatttgtttc tcagttctct tttctgtgtt tgctcgctcg gatgtgtgat
    11161 tgatttcgtt cattaacatt tctcctcttc caattgatta gttttattat atcaaaagaa
    11221 ttattacaat tctatcggtc ttgcgttgga atttcacaaa aaaagaagcg cacgaggcac
    11281 ttctttaaat taaatcaaat tgtttcaagc caagcataat gccgtcacta ttgttatctt
    11341 tcgttacaaa agtagctttt tcttttaata atggtacggc attttccatt gcaatggcat
    11401 aatccactgc gccaaacatt tctaaatcgt tcattccatc accaaacgca taagttggaa
    11461 cgtcttgata gcccattact tcaagtagct tcgagatacc aactgcttta gatccgcctt
    11521 ttcttaagac gtcattacta aatggtgtgt tgcgaacaaa ttgtaattct ggaaagcgtt
    11581 ctggaaaata atcatcacca gtttcgagta aaagaagagc catattgatg ttttcttctt
    11641 tatacatatt aggccttact tctggcattg gctcgcctaa aaaatcatag tgtgctttta
    11701 caactggtgt acttgcggtt gcgccaattc ttttatcatt ataatagcaa acctctacat
    11761 tttgtgattt agcttcttcc gtcaaacgag caagtaaatc agcatcaatc acatcttcgt
    11821 acactttttc tccttcaaag atagccattt gtccgttcat cattactgcg gattcaatgc
    11881 cggtaatttt catttgatga ctgatttcta tgagcgtccg accagtagca ataacaggaa
    11941 taacattatt ttctcgaagt ttatcaagtg cttgaagcga ggtatcaagt actttggatt
    12001 cactatttaa cagtgttcca tccatatcaa aaaaacaaat tccacgtggt ttcacattat
    12061 tcatccttta ctaacataat atatccatca taccaatctt acggatacaa agtaaaggct
    12121 atttgtacat aacaaaatct cctgtatgct caaaaccaag acggtggtat atctcaccag
    12181 caactggatt atcgtaaaat aaacatggtt tctttccttc tgctaataca tcgcaacata
    12241 atttttttag aagtgtactt gcaaaaccac gctgtctata tccatcactt gtcgctacac
    12301 ctgtaatcat tgctgaaaag gaattttctg cagatgtttc tgctacagca acaacttctt
    12361 ggtcttgttc aatataataa attcgtttca cgcctttttc aatttggcga ataattaatt
    12421 cttcattttc atcgcgtgaa ccaaattctt taatgtgttt gcgcatttta ataattggag
    12481 ctacgtcttc tgccactgcc gttctgacaa taacgtcttg atttacagaa atacgattta
    12541 catgttcgca ttcgcaaaaa taagtgtctt gtcttttttc ggcaagttct ggtaaaaatg
    12601 gttccaattc ctttgtgaca cgagaaatac cgctaacttc gtatgtatca tgcttagcaa
    12661 taatttctga gaaagctttt gcatcaaaat tagcatcttt tgaatacggt aagaaaaacg
    12721 tatcgaatcg aagtaacaat gcatgtaatt tgtcttctga atcgaattca ccccaaagat
    12781 cttgcacatc actctcgtaa ccaaaatttt cgatatcccc aataataaat aagttgaggg
    12841 ttgcttcggg ttttaaaagt gccattactt cttcattatc agatacagtt agttttctaa
    12901 tcatgtgcca cactcctatt ttgaaaattg tcttcatttt acgtgagtta ggtaggttcg
    12961 tcaagccctg aatcttacta ttttgcgcca tataaaaaag ctcgggacaa ttagtcccaa
    13021 gcttttatga ttcgtaatga atttcgccaa ttttcaacat taagctgata gcgttgaatt
    13081 tttcatctcc aagatgcatt ttgtttgtat cttgaaaagt gataggtgct gctgtaatcg
    13141 cttctttcgg ttgttcaaag aacttttctt caagtgccaa actttctgta atttgcgata
    13201 tgtatttttg gaatttattt tcgtttctca ttttcccaat catcaatgct tttaaagtgt
    13261 tttgagaaat cccgactgca agcgcgaatg ttctatgagt gtatccattt attttcatat
    13321 aaagtgacaa attagtggca attctttgtt tttctgcctt gtttttcatt tgggtgaacc
    13381 tcctgtcttt ctatagttat cattatgccc ggtgaagatg agaatttgat taaaacttca
//
LOCUS       DASDYK010000076        13434 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.076, whole genome shotgun sequence.
ACCESSION   DASDYK010000076 DASDYK010000000
VERSION     DASDYK010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13434)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13434)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13434
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.076"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..257)
                     /locus_tag="U0308_002043"
     CDS             complement(<1..257)
                     /locus_tag="U0308_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM2317004.1"
                     /translation="MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLI
                     STIKTINFDIERFGYKAFSIVHSAPNLSYTLKISDNCSIQL"
     gene            complement(893..2443)
                     /locus_tag="U0308_002044"
     CDS             complement(893..2443)
                     /locus_tag="U0308_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEM2317005.1"
                     /translation="MYKIGIDVGGTNTDAVILDENQQLIHSVKMPTSEDIETGITESL
                     HRVLSETGIDRSKVTHAMLGTTQCTNAIVERKKLAKVGVLRLGYPATASVLPYTAWPE
                     DMVGFLSGKYKLTGGGYEYDGQVLSEINEAEIRETLASWKGEVESVAVVGVFSSLKND
                     QELAVQKIIEEELGADIPVSISSSVGSVGLIERENATILNAALFKVIAATSDGFEKAL
                     EQEGIAHAEIYLCQNDGTLMSLNYARQFPILTIACGPTNSIRGASYLAGLKDAMVLDV
                     GGTTSDIGVLTDGFPRESSLAVDVGGVRTNFRMPDIISIGLGGGSLVREKDGDITIGP
                     DSVGYRISEEALVFGGKTMTTTDIAVRLGRAEIGNPELVAHIPTDFAEKAYKKIAEMT
                     EDAIDKMKTSSGSVSLVLVGGGSVIIPDEISGVAQIFRDKNGPVANAIGASISQISGQ
                     YEQIYIYSQIEREEALQDAEQKAREQATLAGAVTDSIEVVEVEEIPLAYHPGNATRLR
                     VKVVGNLV"
     gene            complement(2436..3536)
                     /locus_tag="U0308_002045"
     CDS             complement(2436..3536)
                     /locus_tag="U0308_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF917 domain-containing protein"
                     /protein_id="HEM2317006.1"
                     /translation="MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPI
                     KLLSPEEIADDDYFIPAAMMGAPSVLIEKFPKGDEFVRVFEKLGRYVGKEVKGTFPME
                     AGGVNSMIPIVVAAQLGLPMVDCDGMGRAFPELQMVTFHLDGISATPMAITDEKGNIG
                     IMETIDNKWTERLARVTTVEMGASSLVSLYPCNGAQIKQSSIKNIVTLSEEIGKVIRE
                     TSMDEAEKLQKLLDVTHGYHLFEGKITDVVRETRAGFNFGRVKIDGLNKDTGSEVIVH
                     FQNENLVAEKNGEPIAITPDLICMVDLETLMPVTTEALKYGKRVRVMALPADDAWRTD
                     KGIETVGPRYFGYDVNFEPLEELVKKEERRHV"
     gene            complement(3537..4820)
                     /locus_tag="U0308_002046"
     CDS             complement(3537..4820)
                     /locus_tag="U0308_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine permease"
                     /protein_id="HEM2317007.1"
                     /translation="MTEKKSVEQTQSWQSLAFVWTGAMICVPSLLVGGTLISGMPLWE
                     AILIALLGYGVIVLFMIYQGMQSSDLGIPAVSVASQVFGEQGSKKIISILLAIACLGW
                     FGIQANVCGAAFSQFLGIYGINLPVPVSSLIWGVIMLLSAIYGIRILSILNYIAVPVL
                     LFVCIYGLVVSLNDGGLAIVENYKPAGSMSFMTGLAITIGSFALGAVIAGDYSQYTKS
                     RKDVVKAAIVGILPSGVLMITVGAVLALTAGTADISVVFTNLGLPVLGIIGLILAAWT
                     TNAVNAFSGGIAIINVFNISEKYHKVAVAVAGGLGTILAVIGILNHFVPIMSVLSAMV
                     PPVAGVMIASYWIVQKGDKSKWAPVPGVNWLGVSSWLVGAVIAGIPVILTFFPELPQL
                     PNQPLIGIILSLAVYLIGAKVLSGKTNNVENLEGK"
     gene            complement(4954..6549)
                     /locus_tag="U0308_002047"
     CDS             complement(4954..6549)
                     /locus_tag="U0308_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PucR family transcriptional regulator"
                     /protein_id="HEM2317008.1"
                     /translation="MSVKLADLMKLPSLKEAKVVSGKSGLSKLVSSISVLEYTEVALL
                     EDDLFDNDEFYGSEIVVSAFVNIRDDVEAQCRTIERLHKVGEVALILYYVGIFVPKMD
                     QKLIDFANELDFTIIVMPENEMSLRYSEVIYEVVEAIVKQEMTDTNFVTESLEQISSV
                     RPPQRNIDTTLKILSDRTHTSLVLTDNSFQVINSITWPRTRHWDFERIIEASKQIGEH
                     ELVQLTLDERDFYTARKPIFQDGMQAMHLFMMKEKGVLTADVVMQITEVVQVFMNLWG
                     RNYVEISTAELMKAILNDESVKMRRLGKILNVDVSSIKWMWLVKTEEIRDNEQVLAEL
                     KSFVASHFQVSLIDLFEDNIVVLLDNSVAQRDRTHTANEFAMMMKEHGIDLKITVCQG
                     MEQTSDVQSAYSLVNEYKNAANAIYANKSIYSLQEIDFAAKCVEIVDRGELAIAEQMR
                     PLKPLEDNDELIETLSVFLLEGESNYNQAAELLFLHKNTIKYRIQRINELLQYPATKI
                     PESYNLYLAVAIRRILGGNNNNK"
     gene            6705..7652
                     /locus_tag="U0308_002048"
     CDS             6705..7652
                     /locus_tag="U0308_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEM2317009.1"
                     /translation="MSIEPSIKIEEIINEVEKVIVGKRHVVKLSLTALLAGGHVLLED
                     VPGVGKTMMVRTLSKTIGVSFKRIQFTPDLLPADVTGVSIFNPETRDFEFRPGPVMGN
                     IVLADEINRTAPRTQAALLEGMAENSVTVDGITRKLANPFFVMATQNPIEYEGTYALP
                     EAQLDRFLLKINIGYPTVEEEMQLLTLKQYQDPLDQTQQVVTLSELLDLKNKAKQVFI
                     DDVLKNYIIRLVDATRKHPSVALGISPRGSLAFMQAAQAFALIEGRDYVIPDDIQYLA
                     PYIFTHRLILKSEAYYNEETAESIIASILKNTSVPVEKR"
     gene            7657..8805
                     /locus_tag="U0308_002049"
     CDS             7657..8805
                     /locus_tag="U0308_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEM2317010.1"
                     /translation="MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFI
                     LLLLFLSSIYPLKAWKVNRRFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPAS
                     FGNVSARQQVVYPLFKKHFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSE
                     KSLTIYPTYFPDVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKS
                     SAKSDQLMTREFENSATSRLSVIFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLL
                     GDQTSKFAPAKGTSKLQDISTAFAEIAPVDNLTLQESLDSNLHSGEKILLFTPCIDTM
                     LMQKVTRLTDNKQLQIITFQSEHSKSMDAPAIFLEPASLLSRWEREAK"
     gene            8802..10961
                     /locus_tag="U0308_002050"
     CDS             8802..10961
                     /locus_tag="U0308_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase domain-containing protein"
                     /protein_id="HEM2317011.1"
                     /translation="MKRYLTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLS
                     LGSFFLRLKYYWTIPLHIVMIIFVSGIYYAKGGILAGNWFVSFFQITFNGFRDMVQFR
                     SSDISMDFILIVFLIALWLLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNW
                     AIVRTVLEGFLLLHLALASRIAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLP
                     KKAPIFPDPVPTIKNALGINTTRTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRV
                     ESKTVYTGTGWANANSADVISFSSGDNFPIQLTEQTTGATNTAEISFASSNDYMPYPY
                     GTQTVNGAVDSFSANLTIERVGPVDTIKNYTVQLKTPVYNIEKMQNADFSTLSNAFVS
                     QYTQTPKDLPDRVTKLANKVTKDADSIYDKTKAIERYLSASGTFTYSTEDAKETPRGA
                     DYVDQFLFETQIGYCDNFSTSMVVMLRSLGIPARWAKGYTPGEGEKKENDAKTTYTIT
                     NNNAHSWPEVFFPGTGWVPFEPTATFSNPENFQEPTTETANKPETPNDSTSTPETPNT
                     ADKTPEQDNGSSSTGETPKKEEPKTETAASNFEIPSWVWWIPAGLVVTLLALAIIFRR
                     RIRRYLLLRSLRNSPEFGKTYHRLMKLLASYGYVRESSETLRHFSTRVDAELTTTEFS
                     RLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK"
     gene            11078..11833
                     /locus_tag="U0308_002051"
     CDS             11078..11833
                     /locus_tag="U0308_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4866 domain-containing protein"
                     /protein_id="HEM2317012.1"
                     /translation="MTTIFPKEQNVAPLFEQILANPTACRRFKDVFLDNLESYQETRG
                     FEKDDTLFAKIILSAYRQSDVSALLLGVCGRTLFELLRQAFLIPKKLTVDNPFFLTDK
                     EGNFIAKKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIVHSYEPDFSISTKRIN
                     KKRGILVLYSLPDTLKLGMTESEVYAFIWKTFLHIQEIIPSSRIFYGQETSENADELG
                     VFLPIHHFEKKMLQNIEQVNELVDALREQMVNK"
     gene            11854..12519
                     /locus_tag="U0308_002052"
     CDS             11854..12519
                     /locus_tag="U0308_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1275 domain-containing protein"
                     /protein_id="HEM2317013.1"
                     /translation="MARSRQISESIGLGLLLALAGGFMDAYSYIERGQVFANAQTGNI
                     LLFGINISEGNWAIAIQYFWPVVSFTVGIAISEVIHRRDIRRLHWRQLSVLIEAVILI
                     GVAFIPLDHNLIANSLISFVCGIQVESFRKMHGRGVATTMCIGNLRSATQNLCDYFEY
                     KEKQYLRNSLLYFTVILSFIIGAVVGNFFIQLFAQYAILVCAFLQFIAFMMMFIDRES
                     KII"
     gene            complement(12563..13288)
                     /locus_tag="U0308_002053"
     CDS             complement(12563..13288)
                     /locus_tag="U0308_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317014.1"
                     /translation="MKDKTKKRKWNWAQILAIFVLVTLVVSMVYATVNLITAPSGNVP
                     EGQQTKGDYSLMLMQCVLGVVVLFLPSIISKKMKFVIPNAMYIVFIVFLYCAIYLGEV
                     RSFYYLIPNWDTILHTFSGAMLGGLGFSIVSLLNNDERITLSMSPVFVALFACSFAVF
                     LGVFWEFYEFAADSFGMNMQKTMLEDGTMLQGHAAVADTMGDLFVDFLGAFVISIIGY
                     FSIRKNKKWMKNFEFKKVDEEVK"
BASE COUNT         3977 a         2786 c         2449 g         4222 t
ORIGIN      
        1 atgagttgaa tactacaatt atccgatatt tttaaggtat aggacaaatt tggcgcggag
       61 tgaacaatcg aaaacgcttt gtatccaaat cgttcaatat caaaattaat tgttttaatc
      121 gtagaaatga gggttggata cgtaatgttc aaatcattta atagttcctc ttgtgtactt
      181 gtatgatttt ccgcataaaa aatcttctca agaagcgcta cctttttttg gctttttgaa
      241 tctaaatatt ctctcattaa aaacacttcc tttgaatgtt actttttatg taaaatccat
      301 gtaactgcaa taagatgttc ctctaagtca tcgtattcgc tccattggct cttgttactc
      361 attgtttctt ttccagttca aagtccactt ccggggttcc ctctagctct tccaccaatg
      421 gtaattgatt ctattcaaat aaattcagcc attcgtttcg agtgagatat tcatgatttt
      481 gatacttcac cttgtttttt gcgcgctatt caggcacata tgctttatct ataataacat
      541 ctttcggact actacccaat ccaaaaaagt catgtgaaaa atacggaaca aacggtaata
      601 tttcaattga tttagaagtg aatgacgcgc ggcaagcttt tgttcggttc ctttattcat
      661 ttatttaccc tactagaata tttttagtta gcgtttgggt tgtttttcta gataattagt
      721 ataagaattg atttatttaa atccatgtct aaaataacac aaattgtgtc aatatacata
      781 attttataca tatgggatta cgttatacaa aaatagactg gaagcaaagt aatttcttac
      841 tttgtttcca gtctgaagtc agcaatgcac tactatttac ttcttacttc ccttaaacca
      901 aatttcccac aactttcacg cgcaatctgg ttgcattacc cggatgatac gctaatggga
      961 tttcttccac ttccaccact tcaatcgagt cagtcactgc accggctaga gttgcttgtt
     1021 ctctcgcttt ttgttcggca tcttggagcg cttcttcccg ctcgatttga gaatagatgt
     1081 agatttgttc gtattgtccg ctgatttggg aaatggatgc gccgattgcg ttggctactg
     1141 ggccgttttt gtcgcggaaa atttgtgcga caccagagat ttcgtctgga ataatcacgc
     1201 taccaccgcc aacaagtact agacttacac tccccgaact ggttttcatt ttatcaatcg
     1261 catcttcggt catttcagca atttttttat aggctttttc ggcaaaatcg gttgggatat
     1321 gtgcgactaa ttcagggtta ccgatttctg ccctacctag acgaaccgcg atgtcggtag
     1381 tggtcatcgt tttacctccg aaaactagtg cttcttcgga aatacggtag ccaacgctat
     1441 ctggtccgat tgttatgtcg ccatcttttt cgcgaacgag acttcctcca ccaagtccga
     1501 tggaaataat atctggcatt ctaaagttgg tacgcactcc gccaacatca accgcaagcg
     1561 aggactctct agggaaacca tccgtcagca ctccaatatc agaagtcgtg ccaccaacat
     1621 cgagaaccat cgcgtcttta agtcccgcca agtaggatgc gccgcggata ctgttcgttg
     1681 gtccacaagc aattgtcaaa atcgggaatt gtcttgcata gtttagtgac attaaagtcc
     1741 cgtcgttttg gcaaagatag atttcagcat gcgcaattcc ttcttgttct agtgcttttt
     1801 caaaaccatc actcgttgcc gcaataactt tgaaaagggc tgcgtttaaa atcgtcgcat
     1861 tttcgcgttc aatcagtcca acagaaccta cggaagagga aatcgaaacc ggaatatctg
     1921 cgcctagttc ttcttcaata attttttgaa cagctaattc ctgatcgttt ttcaaggaag
     1981 aaaagacgcc aacaactgcg acggattcca cttcaccttt ccaactagct aaggtttcac
     2041 ggatttctgc ttcgttgatt tctgatagca cctgaccatc atactcatag ccgccaccag
     2101 ttaatttata ttttccagat aaaaagccaa ccatgtcttc cggccaagct gtatatggta
     2161 aaacggatgc tgttgcagga tagcctaaac gaagaacgcc aacttttgct aattttttac
     2221 gttccacaat cgcgttcgta cactgggttg ttccaagcat ggcgtgcgtt actttcgagc
     2281 gatcaatgcc cgtttcgctc aatacgcgat gaagtgactc agtaattcct gtttcaatat
     2341 cttcactcgt tggcattttt acactatgaa tgagttgttg attttcatct aaaataacgg
     2401 catcggtgtt tgtaccacca acgtcaattc caattttata catgacggcg ttcctccttt
     2461 ttgacaagtt cttctagtgg ttcaaaattg acatcatagc cgaaatagcg cggtccaact
     2521 gtttcgatac ctttgtccgt tctccaagca tcatcagctg gtagtgccat cacgcggaca
     2581 cgttttccgt atttgagcgc ttccgtcgtt accggcatca gcgtttcaag gtctaccata
     2641 caaattaaat ctggtgtaat tgctatcggt tcgccatttt tctccgcaac aagattttcg
     2701 ttttggaaat gaacaatgac ttcgctacct gtgtctttgt ttagtccgtc gattttcaca
     2761 cgaccaaagt tgaagcctgc acgcgtttcc cgaacaacat cggtaatttt cccttcgaat
     2821 aaatgataac cgtgcgttac atctaataat ttttgtagtt tttctgcttc gtccatcgaa
     2881 gtttcgcgga ttactttacc gatttcttca gatagtgtca cgatattttt aatactactt
     2941 tgcttaattt gcgcaccgtt acacggatac aggctcacaa gagaactcgc gcccatttcg
     3001 accgttgtca cacgtgcaag tcgttcggtc catttattat caatcgtttc catgatgcca
     3061 atattacctt tttcatcggt gatagccatt ggtgttgcgg aaatcccgtc tagatggaac
     3121 gtcaccattt gtagttctgg aaaagctcgg cccatgccgt cacagtccac cattggcaaa
     3181 cctagttgag ccgccacaac gattgggatc attgagttta ctccaccagc ttccattgga
     3241 aatgttcctt ttacttcttt gcctacatat ctacctaatt tttcaaatac acgaacgaat
     3301 tcgtcgcctt taggaaattt ttcaatgagt acagacggtg cccccatcat cgcggctgga
     3361 atgaaataat catcatccgc aatttcttct ggggataaca gtttaattgg tccatgtttt
     3421 ttaattgcag ttaatgccat catcttgcct atatatggat ctcctccgcc accagtgcca
     3481 agaaacgcag caccaatcgc gatattttca atagcttgtt catctaaata acgcatttat
     3541 tttccctcca agttttctac attgttggtt ttcccgctca gcactttcgc tccgatcaag
     3601 taaacagcca gcgacaagat aataccgata agtggttgat ttggtaattg tggtagctcc
     3661 gggaaaaatg tcaaaatgac tggaatcccc gcaatgactg caccaactag ccaagaactt
     3721 acacccagcc agttgacacc tggtactggc gcccatttgg atttatctcc tttttggaca
     3781 atccagtaag aagcaatcat tactcctgca acgggtggta ccattgctga aagtacggac
     3841 ataattggaa caaagtggtt taaaattccg ataaccgcga gtattgttcc aagtccgcct
     3901 gcaactgcca ctgctacttt gtgatatttt tcagagatgt taaatacatt gataatcgca
     3961 atacctcccg aaaaggcatt tactgcgttt gttgtccatg cagcaagtat caagccgata
     4021 ataccaagaa ctggtaatcc taagtttgta aatacgacag aaatatctgc tgtacccgcc
     4081 gtaagtgcaa gtaccgctcc aaccgtaatc ataagcacac ctgatggcaa aatcccgaca
     4141 atagctgctt ttacaacatc tttacgcgat tttgtatatt gagaatagtc tcctgcaatt
     4201 actgccccta acgcaaatga gccaattgta attgctagtc ctgtcataaa cgacatgctt
     4261 cctgctggtt tataattttc aacaatagct agtccgccat cgtttaaaga aacaacaagt
     4321 ccgtaaatac atacaaatag taaaactggt actgcgatat aatttaaaat actcaaaata
     4381 cgaataccat aaatagctga aagtaacatg ataactcccc aaattaagga agaaactggt
     4441 actggaagat taattccata aatacctaga aactgtgaga atgctgcacc acatacattg
     4501 gcttgaatac caaaccatcc tagacaagca atcgctaaaa gaatagatat gatttttttc
     4561 gacccttgtt ctccaaaaac ctgtgaagct acactaactg ctggaatacc taaatcgcta
     4621 ctttgcattc cttgatatat cataaataag acaataacgc cgtatcctaa aagtgctatt
     4681 aaaattgctt cccaaagagg catacctgaa attaaagttc ctccaactag tagactcggt
     4741 acacaaatca ttgctccggt ccatacaaat gctaaactct gccaggattg cgtttgctcc
     4801 actgatttct tctctgtcat tatgttccgc ccctttttct tgaatttgtt atattaatga
     4861 ctaattatat aagaactagc tatcatttgt atttatcaga attgaaaaaa aatagcgcaa
     4921 tctttgtcgt tttggacaaa aaatgcacta tttttattta ttattgttat ttccaccaag
     4981 aatccgtcga atcgccactg ctaaataaag gttgtaggat tctgggattt ttgtcgccgg
     5041 atattgcaat aactcattta tccgttgtat tcgatattta atcgtatttt tatgcaggaa
     5101 tagtagttca gctgcttgat tataattgga ttcaccttcc agtaaaaaca cagacagcgt
     5161 ttcaattagt tcatcattat cctctaaagg ctttagtggc ctcatttgtt ctgcaattgc
     5221 tagttctcct cgatctacta tttccacaca ttttgctgcg aaatcaattt cttgaagaga
     5281 ataaatggac ttgttcgcat aaatcgcatt tgccgcattt ttatattcat taacgagcga
     5341 ataagcgctt tgcacatctg acgtttgctc cattccttgg caaacggtaa ttttcaagtc
     5401 tatcccatgt tctttcatca tcatcgcaaa ctcattggct gtatgcgtcc ggtcccgctg
     5461 cgccactgaa ttatcaagta aaacaacgat attgtcttca aataaatcaa ttaatgaaac
     5521 ttggaagtga ctagctacaa aacttttcag ttcagctaaa acttgctcat tgtcgcgaat
     5581 ttcttcggtt tttacaagcc acatccattt aatagaagaa acatccacat ttaaaatctt
     5641 accaagtcgc cgcattttga cactttcatc atttaaaatg gctttcatca gttcagctgt
     5701 actgatttcg acatagtttc tgccccataa attcataaat acttggacta cttcggtaat
     5761 ttgcatgact acatcggctg ttaatacgcc tttttctttc atcataaata agtgcatcgc
     5821 ttgcataccg tcttgaaaaa tcggttttct ggccgtataa aaatcgcgtt catccaaggt
     5881 aagctgtaca agctcatgtt caccgatttg tttagatgcc tcaattatcc gttcaaaatc
     5941 ccagtggcgc gttcgtggcc aagtgataga attaattact tggaaagaat tatccgttaa
     6001 gacgagcgaa gtatgcgttc tatcagacaa aattttcagt gtggtatcta tatttcgttg
     6061 tggcggtcgc acactcgaaa tctgttctaa tgactcggtt acaaagttgg tatctgtcat
     6121 ttcttgcttc acaatcgctt cgactacttc ataaatcact tcgctatatc taagtgacat
     6181 ctcgttttcc ggcatcacga taatggtaaa atcaagttca tttgcaaaat caatcagttt
     6241 ttgatccatt ttcggcacaa aaattcccac gtagtaaaga attaaagcaa cttcgccaac
     6301 cttatgtaat cgctcaattg tccgacactg tgcctcaaca tcgtcacgaa tattcacaaa
     6361 agccgataca actatttcac tgccataaaa ttcatcatta tcaaataaat catcttctaa
     6421 aagagctacc tctgtatatt ctaaaacaga aatagacgaa acaagcttag ataatccaga
     6481 ttttccagag actactttcg cttcttttaa agatggtaat ttcattaaat ctgccaattt
     6541 tacgctcaaa gttcgccacc tccagttatt ctaagtgtaa acaatctcct agaaaaagtc
     6601 catgccacgt taaatctttt acattcaagg cctattatag tagcattgaa ccatgaataa
     6661 acatattctg attaaaaaca taagaaaaga aacggaggca aattatgtct atagagccat
     6721 ccattaaaat agaagaaatt attaatgaag ttgaaaaagt aatcgtcggt aaacgacatg
     6781 ttgttaaatt aagcttaact gccctacttg cgggtggtca cgtattatta gaagatgttc
     6841 ccggtgttgg taaaacgatg atggtccgca ccctttctaa aacaattggt gtttccttta
     6901 aacgaattca atttacacca gatttacttc ccgcagatgt gacgggggtt tcgattttca
     6961 atcctgaaac acgtgatttt gaattccgtc caggtcctgt catgggaaat attgttcttg
     7021 cggatgaaat taatcgtact gcgcctcgaa ctcaagccgc tttacttgaa ggtatggctg
     7081 agaatagtgt gacagtggat ggtattacgc gcaaacttgc taacccattt ttcgttatgg
     7141 cgacgcaaaa tccgattgaa tacgaaggaa cgtatgccct tccagaagca caattagacc
     7201 gatttttact caaaattaat attggttacc cgacagtcga agaagaaatg cagctactta
     7261 cattaaaaca ataccaagat ccacttgatc aaacgcagca agtggtgacg ctcagcgaat
     7321 tactggacct aaaaaacaaa gcaaagcaag tctttattga tgatgtttta aaaaattata
     7381 ttattcgcct agttgatgcg actcgaaaac acccttccgt tgcgctcgga attagtccgc
     7441 gtggctcgct cgctttcatg caagccgctc aagcttttgc gcttattgaa ggtcgagatt
     7501 atgtgattcc tgatgatatt cagtatttag caccgtatat tttcactcat cgtctcattt
     7561 tgaagtctga agcttattat aatgaggaaa cagccgaatc cattattgct tccattttga
     7621 aaaacacgtc agttccggta gaaaagaggt agctaaatgt tgaaaaaacg cctcctatta
     7681 gcatttcggt ggattattat gctaattatt tacgctgggc tttggactta tacgttattt
     7741 caaggtgata ctgctagctg gtttttaacc tatttcttta gttttatcct gttactttta
     7801 tttttgtcct cgatttatcc actaaaagcg tggaaagtga atcggcgttt tgttaaaaat
     7861 acctatcatg atggcgattt aattgatatg caagtatcat tcactcgaaa atcgcgttat
     7921 ccggtgggtt atttgctatt ccaacaaaaa atacccgcta gttttggcaa tgtgagcgcc
     7981 cgccaacaag tggtttatcc gctttttaaa aagcatttca cggttacact agctggattt
     8041 gtaggcgttc gtgggattca ttcatttccg ccagtggatg tagaaactag tgatgctttc
     8101 ggcttgttag aacgttcgcg ccaactatct tccgaaaaat cgctcactat ttatccaacc
     8161 tattttccgg atgtattaga aaaaatcagt gaagcttctc cagaaaacga acgcaatgcc
     8221 gcttattgga cgcttaagaa aaacagcaat ttgcacagtt tgcgcgaatt ttcttctggt
     8281 gaccggattt ctcttattga ctggaaatct tctgctaaaa gcgaccaact gatgactaga
     8341 gaatttgaaa atagtgcaac atcacggtta tccgtcattt tttacggagc gagccatccc
     8401 aattttgaat tatcacttcg ggcggcttac tcgtttattc gcaaaatctc cgaagataat
     8461 ggagaaattc gtgttactct tttaggcgat caaacaagta aatttgctcc ggcgaaaggt
     8521 acgagtaaac ttcaagatat atcgactgct tttgcagaaa tcgccccggt agataattta
     8581 acgctgcaag aatcgcttga tagtaattta cattctggag agaaaatcct tctattcacg
     8641 ccatgtattg atacgatgtt aatgcaaaaa gtgactcgtt taacggataa taaacagctc
     8701 caaatcatta cttttcaatc agagcattct aaatcgatgg atgctccagc gattttcctt
     8761 gagccagcaa gtcttctaag cagatgggag cgtgaagcta aatgaaaaga tatttaacgc
     8821 tcgtcatgct atttattcta tctgttttgc ttatctctga gtggatttat ccattcgcag
     8881 agctgaccga actctctaca gcaaactgga ttattttgtt tataaccctt tcactcggta
     8941 gttttttcct ccgtttgaaa tattattgga caatcccgct tcatatcgtg atgattatct
     9001 tcgtttcagg aatttactac gctaaaggtg ggattttggc agggaattgg tttgtttctt
     9061 ttttccaaat cacctttaat gggtttagag atatggtaca gtttcgctcg tccgatattt
     9121 ctatggactt tattttaatc gtttttttaa ttgctttatg gcttttgagt tatattacta
     9181 cttatagtat tctgcgcaaa cagcgggtta tgagtgtttt agttttaact gttgcttatt
     9241 tagcggttat taatactttt acagattata acagtaattg ggccatcgtc cgaactgtat
     9301 tagaaggatt tttattactt catcttgcac tggcaagtcg gattgcagca ccaaatagaa
     9361 ttagcgcgga ctccttaaaa cgtaatggtt tgttttatca tatttttgtg attttgttac
     9421 tggccgtatt tgtttttagt tcgttaatgc ttccgaaaaa agcaccgatc ttccctgatc
     9481 cggtaccgac gataaaaaat gcgcttggaa ttaatacaac gcgcacggtg ggttatagtg
     9541 aagatgatac gacacttggt ggtgctctca aaaaggataa tgctactgta ttcacggccc
     9601 gggcggaaaa agggcattac tggcgtgtag aatcgaaaac ggtctatact ggcactggct
     9661 gggcaaatgc aaattccgcg gatgtcatat ctttttcttc cggtgataat ttccctattc
     9721 aactcacaga acaaacaact ggtgctacaa acacggccga aattagcttt gcttcttcta
     9781 atgattacat gccttatcca tatggaacgc aaacagttaa tggcgcagta gattcattta
     9841 gtgccaattt aaccattgag cgggttggac cagtggatac aatcaaaaat tatacggtcc
     9901 aattaaaaac acccgtttat aatattgaaa aaatgcagaa tgccgacttt agcacacttt
     9961 ctaatgcttt tgtttcccaa tatacccaaa caccaaaaga cttaccagac cgggtgacaa
    10021 aacttgccaa taaagtaaca aaagacgctg attcaattta tgacaaaacg aaagcaatcg
    10081 aacgctattt aagcgcttct ggcaccttta cttatagtac agaggatgcg aaagaaacgc
    10141 ctaggggagc cgattatgtc gatcaatttt tatttgaaac gcaaattggg tattgtgaca
    10201 atttttctac ttccatggta gtcatgcttc gatcgcttgg gattccagca agatgggcca
    10261 agggctacac acctggtgag ggtgagaaaa aagaaaatga tgctaaaacg acttatacaa
    10321 tcacaaataa caatgcacat tcttggccgg aagtgttttt cccaggaact ggatgggttc
    10381 catttgagcc aacagcaaca ttctccaatc ccgaaaactt ccaagaacca acaactgaaa
    10441 cagctaataa acctgaaaca cctaatgata gtacgagtac gccagaaaca ccaaatacag
    10501 ccgataaaac accagaacaa gataacggta gcagctccac aggtgaaaca ccgaaaaaag
    10561 aagaacctaa aacagaaaca gcggcctcta atttcgaaat tccgtcttgg gtttggtgga
    10621 ttcctgctgg actagttgtg acactgctcg cactagctat tatattcaga cgtagaattc
    10681 gtagatattt attgcttcgt tctctgagaa atagtccaga atttggcaaa acctatcata
    10741 gacttatgaa attacttgct tcttatggtt atgtccgcga atcgagtgaa acgttacgtc
    10801 attttagcac cagagtggat gctgaattaa caacgacaga attttcgcga ctaacgaaaa
    10861 tgtatgaagc ccaaatttat agtaataact taacggaaaa agtgataact gcggaagaaa
    10921 cgcagcttgt gcaacaagtt atagctcgat taactaaata aacagagaaa aagcgcctaa
    10981 gaaaatattc atggcgcttt ttcttatgta atatttttat cttttcttcg taaatatgcg
    11041 ataatgttaa catgaataaa ataaaggaga cttgaaaatg acaactattt tcccaaaaga
    11101 acaaaatgtc gctccccttt tcgaacagat attggctaat ccaacagctt gcagacgttt
    11161 taaagatgta tttctagata atttagagag ctaccaagag acgcgtggtt ttgaaaaaga
    11221 tgatactctt tttgctaaaa ttattttgtc ggcttatagg caaagtgatg taagtgcctt
    11281 gttgttaggt gtttgcggga gaacattatt cgaacttctc agacaagctt tccttattcc
    11341 taaaaaatta acagtggata acccgttctt tttaacagat aaagaaggta attttatagc
    11401 caagaaggac gatatttcta accgcgaaca ggagaaattt caagagattt atcaatcgga
    11461 tttgcatcat tctgaaacaa cgattttctt agtagatgat gatgatatcg ttcattccta
    11521 cgagccagat ttttcgattt ccaccaaacg aatcaataaa aaaagaggga ttttggtact
    11581 gtactctctt cctgatactt taaaattagg aatgactgag tcggaagtct atgcgtttat
    11641 ttggaaaact ttcttgcata tacaggaaat cattccatcc agccgaattt tctacggaca
    11701 agaaacatca gaaaatgcag atgaacttgg cgtatttctt ccaattcacc attttgagaa
    11761 aaaaatgctg caaaatattg agcaagttaa tgagctagtt gatgctcttc gtgaacaaat
    11821 ggttaataaa taagaaaaaa aggatgaaaa atcatggcaa gatctagaca aatttcagaa
    11881 tcaatcggtt tggggctttt acttgctctg gctggcggat ttatggatgc ttactcttac
    11941 attgaaagag gtcaggtatt cgctaatgcg cagactggga acatactttt atttggaatt
    12001 aatatttcgg aggggaactg ggctatcgca attcagtatt tttggccggt tgtctctttt
    12061 acggtcggaa ttgcgatatc tgaagtgatt catcggcgtg atattaggcg tcttcactgg
    12121 cgccagcttt ctgtcttgat cgaagcggta attttgattg gggtcgcatt tattccactt
    12181 gatcataatc tgattgccaa ttcgctcata tcttttgtat gtggtattca ggtagaaagc
    12241 ttccgaaaaa tgcatggtag aggggttgcg acgacgatgt gcatagggaa tttgcggagc
    12301 gctacccaaa acttatgtga ttatttcgag tacaaggaaa aacaatattt gcgtaacagc
    12361 ttgctatatt ttaccgttat tcttagtttt atcattggtg cggttgtagg gaatttcttt
    12421 attcagttat tcgcacaata tgctattctc gtttgtgcat ttttacagtt tatcgccttt
    12481 atgatgatgt ttattgatag agaaagtaaa ataatataaa aaaactgcca acaaaatgat
    12541 ttctcacttt gttggcagtt ttttatttta cttcttcatc tactttttta aattcgaagt
    12601 tcttcatcca ttttttattt ttgcgaatgg agaagtagcc gatgatggat atcacgaaag
    12661 ccccgaggaa atcgacgaac agatcgccca ttgtatcagc aactgctgca tgaccttgaa
    12721 gcatcgtgcc atcttctagc attgtttttt gcatgttcat tccaaagcta tcggctgcaa
    12781 attcatagaa ctcccagaaa acacccaaga aaacagcaaa gctacaagca aataatgcaa
    12841 cgaaaaccgg actcatcgaa agagtaatcc gttcatcatt attcagtaag ctcacaatag
    12901 aaaaaccaag tcccccaagc attgccccac taaacgtatg tagaatcgta tcccagttag
    12961 gaattaaata atagaaacta cgaacttcgc caagataaat ggcacaatat aagaaaacga
    13021 taaaaacaat atacatcgca ttcggaatga cgaatttcat ttttttacta atgatggatg
    13081 gtaagaatag aactaccacg ccaagtacac actgcataag cataagtgag tagtcgccct
    13141 ttgtttgttg tccttctgga acattaccag atggcgctgt aattaagtta actgttgcat
    13201 aaaccatcga aactacgagc gttactaata caaaaatagc caaaatctgt gcccagttcc
    13261 attttctttt ctttgttttg tccttcatga agcgtctcac ccctttttaa aatatgtatt
    13321 cattataatc tatgtgaagc gaaaaaagaa atttaaaacc agcttgccgc ttcttcataa
    13381 cgcttttgtg acaatttcct gtctaaaatc agctatattt tgcgtttctc acac
//
LOCUS       DASDYK010000077        13369 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.077, whole genome shotgun sequence.
ACCESSION   DASDYK010000077 DASDYK010000000
VERSION     DASDYK010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13369
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.077"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            34..2178
                     /locus_tag="U0308_002054"
     CDS             34..2178
                     /locus_tag="U0308_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEM2317015.1"
                     /translation="MDKFKQQLIKYLKLFFGFIGKWLSKGWQKFRRFWKNKHIGKIFL
                     LAGLVFLLSFIIYLVIVAKSADIDALKKGLESATIIYDKDGDKAGELSSTDATFVSID
                     KISKNLQNAVVSIEDRKFYEHKGFDLKGIARAGVNLVTSGGISGGGSTITQQLAKNAL
                     LTQEQTFTRKAKEIFMAREIEKTYSKDEIMEMYLNRSYFGNGEWGVENASLKYFGKSA
                     ADLNIPEAATIAGLLQAPSAYDPYQHIDKATNRRNMVLNAMVETGTISKAEGDKYKAT
                     KIVLNDQSKDPLANKYPWYVDAVINEAVNEADITQDEIMQKGYKIYTELDQNYQTSLE
                     NVYNNDGLFPSNANDGTLVQSGAVLMDPATGGIRALVGGRGEHVFRGFNRATQMKAQP
                     GSTMKPLAVYTPALQSGYDVDSMLKDEKITYKGNYTPTNVGGVYSGEVPMYKAVANSI
                     NAPAVWLLDQIGIDKGVKSVEKFGITVPEKDRTLGLALGGMSKGASPVEMATAYATFA
                     NNGAKPESHIITKIVDPSGNTVYENVPKTKQIISETVSNEMTSMLLDVINTGTGQSAA
                     VSGHEMAGKTGSTQVPFDDTSGTKDQWFVGYTPNLVGAVWMGYDKTDKEHYLTTTSSA
                     GVSSLAHYVMNSGLQYQKSADFSTKSAAQETAAKKEEEEKEKNSGSDFWSGVKEKADE
                     AGETIKKGADKVKEFGGKVSDGIGNLIDSIGN"
     gene            2288..2485
                     /locus_tag="U0308_002055"
     CDS             2288..2485
                     /locus_tag="U0308_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLDc N-terminal domain-containing protein"
                     /protein_id="HEM2317016.1"
                     /translation="MDKTQIALIIPVILLYLALLLTAIIDLTKNWNERKNPVIWLVVI
                     IVINIFGPIAYFIFGRKEEGN"
     gene            2485..3390
                     /locus_tag="U0308_002056"
     CDS             2485..3390
                     /locus_tag="U0308_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317017.1"
                     /translation="MKKLEIQGLKKKYNGKWVIKGIDLTINEKECVALIGPNGAGKST
                     MINMIVQILTQDEGQITLDGQNAKSVREKIGFLPQYPEFYGWMSATECLHFMGKLSNM
                     EKTDLKTRIKEVLILVGLEESANKKISTYSGGMRQRLGIAQAILHRPELLVLDEPVSA
                     LDPIGRREMMLLLDKLKKEITILFSTHILKDAEEICDRIAIIKNGELVSDKTVVQLME
                     EESSPVFDVEFSGDSEAWQTLLLQNEHVEKIERVGMVYQVYTTNQKAGSEAILKSLLQ
                     IEGEFIRVENRHQSLEEIFMEKVGK"
     gene            3387..4181
                     /locus_tag="U0308_002057"
     CDS             3387..4181
                     /locus_tag="U0308_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEM2317018.1"
                     /translation="MTHFNALLAREWLEQRRSLKIIWLPIVFALLGLTQPLMMYFLPE
                     ILKAVGTGAETEQVIALMGDQSAQEVMAQTLGSQFDQIGIIIIIVVAMACIQNDRTRG
                     MLAFIMTRPVSAAEYVLSKWVMQCMVGLSSLLIGYVLAAYYTYFLFGELAINSLTQAF
                     FVYAIWFIFVISLVVFASAVFDSNAVVAMISVFIAIVLGVISGFGGWIQMFNPAYLSK
                     NATMLIMSDKTMDYFIPTLCITILWIFAFISLTILMIKIKPLPKTE"
     gene            4251..5618
                     /gene="fumC"
                     /locus_tag="U0308_002058"
     CDS             4251..5618
                     /gene="fumC"
                     /locus_tag="U0308_002058"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEM2317019.1"
                     /translation="MERIERDTLGEISVDATKYWGAQTERSKRNFAIGDNPMPIEIIY
                     AFAQLKKATAKVNAAEGKLSEEKAIAIGQVCDQIIQGELDEHFPLVVWQTGSGTQSNM
                     NVNEVIAHVANLTLGEGQIHPNDDVNMSQSSNDTFPTAMHIAAYGALVTKLLPEITKM
                     EAVLAEKKNKYMHLVKIGRTHLQDATPLTLGQEISGWEACLTNNKNYLETSMKAILPL
                     AIGGTAVGTGLNASRDFGDKVAEELMKQTGYPFTSDSNKYFALTSHSPINFVHGSIRS
                     LASDLMKIANDIRLLASGPRSGIGELTIPANEPGSSIMPGKVNPTQCEAMTMVAAQVM
                     GNDVTINVAASQGNFELNVYKPVIIFNFLESVKLLSDSMRSFRLHCLEGLTANEKVIE
                     TKVNDSLMLVTALNPHIGYEKAAKIAKLAFDENTTLKEAAIKTGFVTEKQFDLWIDPL
                     KMTNL"
     gene            5722..6855
                     /locus_tag="U0308_002059"
     CDS             5722..6855
                     /locus_tag="U0308_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HEM2317020.1"
                     /translation="MSVLFTILLMAVIGGFIGAMTNYIAIRMLFRPYKAIYLFNKRLP
                     FTPGLIPKRRDELAEHIGKVVVSHLLTEDAIRARLLDENLQKEITDTITKMFHEKMQL
                     ETTPNELLHHFGYENAEIRSMTWVEKTLEKEINHFLTTKKTTKMSDLIPTMLESELTT
                     KLPHVTERITSKMTLFVSSEEGKIQIKQMLQKFFEEHGKMGSMARMFINIDSFSEKIQ
                     QEGLKLIGQEDTKNLINQLLTTEWKNFEAKELQELIPTEKQAHLAGQLTSELIQTFPH
                     EKLFNQPIQEMLRGYEAAITEKVIPFAVERMLDFVATHSAEIVERMDLAKLVETQIAT
                     FSLPEIEKLVVEISGRELKMITYLGGILGGFIGIIQGVLAMWI"
     gene            6937..7290
                     /locus_tag="U0308_002060"
     CDS             6937..7290
                     /locus_tag="U0308_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF/YmcA family competence regulator"
                     /protein_id="HEM2317021.1"
                     /translation="MAVNIYDLAHDLDKGIRETPEFISLQDAYREVNENADAKAKFER
                     FRDVQVTIQEKQMTGQEIDDETVDVAQQVAQEVQENELIVKLMEKEQAMSTIINDLNR
                     IIMTPLQDLYNVAND"
     gene            7433..8668
                     /locus_tag="U0308_002061"
     CDS             7433..8668
                     /locus_tag="U0308_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HEM2317022.1"
                     /translation="MKEIQFLHMADLHLDSPFIGLSTLPQPLFSAIQESTFQSLERIT
                     TVAIKEAVDFVLIAGDIYDSEDQSVRAQARFSKEMKRLEVANIPVFMIHGNHDFIEKH
                     KEKLTLPSNVHVFSEQVEVMSHKTATGVSVNIYGFSYNERHIRSSRVDKYKIQGNADF
                     HIALLHGSEVSSSEEHDVYAPFRVQEISKKGFDYWALGHIHKRQLLAESPSIYYPGNI
                     QGRNRKESGEKGASIITLSEASTTIDFIGTSPIIWEEAVITLPENSEINAFYRETTKL
                     LESYQGRSHSYFLHIIVKMENKQKIDTNDWLQMLQEEVEITDNTFVWVHKLTTEITNQ
                     SNSQTWYESHLAGEEIKHSFETLQDESAFYQAVEALYLESGVSRYLDDLSEIDRERLL
                     HDALMELGRTLAEVEGDDK"
     gene            8665..11388
                     /locus_tag="U0308_002062"
     CDS             8665..11388
                     /locus_tag="U0308_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2317023.1"
                     /translation="MRITSIDIIGYGKWSDAHFNNIANFQVFYGENEAGKSTIMAFIH
                     SILFGFPTKQQSIPRMEPKNGGPYGGRLTLEDTPLGKVIIERLKGKATGDVRIYYGDG
                     QTAGEEKLPEIIGEIDRNTYEAIFSFDIHGLQNIHQWKKKEFERYLLATGTTGSDALL
                     KGAEALQKKLDSLYKPSGRNPLINQQLKKVKEAQHAFQNAKKQNAQYEQLINEKEQAI
                     VRQTELQKEKTTMRVELDALATLADLWPLYQEWKALSNKASETTEATFPPDGVIRLEH
                     LNLREKEWQNQLIQLEERQKNLISNNNYEHSAFFAENEAEVTYLIETYAAFGEREIQL
                     KNLKQEIKFQQVDTKQPLRIWSSELEQTMIHLKEKEQSHKEQQHDIQLKLKFTNNSEE
                     KLQKKIDQIEAEMWDNKTFQQAKEKMQDSPKTSKTKTMVSLGIFAVAFVLMIVFQAIW
                     SVALVFVSALIVGYAFITTGKSSPTNNEQILAFLEQKKIRQEWQQLLNEMDMVASQIA
                     ELRAAENKLSENIYQHTMELRHFFSDLGINTEPSSNWHYELSIYKKNSEKRQLAMELI
                     SKLEPLAEKQEAYRARLENLKLPIDYTDTEEKITFLRQGLLYYRNHLTENAKLAEKLE
                     QVTMQLDLVKQDLLLVKKEKADLLERANVSNEEDFRMAAMRVKEEQKWRERLVLIEAQ
                     LEPEKREALNRYENQATIKEKELQLEESLRQIELEQEQLHASLAAQNHAIDKLEEGGT
                     FAVLMQEFYSEKSKLQQISAEWTETKLALQMLQNTMQQLQEGKLPKTLKLASEYFNHL
                     TSGNYRKVYLQDNRLQVESKDRIPFFPEELSQATKEQLYLAIRFALIDVIHKDFPLPI
                     IIDDGFVHFDSSRMGQMMQLLQKRKSENQVIFFTCHQETRKYFSSEDIRVL"
     gene            11433..12374
                     /gene="yhaM"
                     /locus_tag="U0308_002063"
     CDS             11433..12374
                     /gene="yhaM"
                     /locus_tag="U0308_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease YhaM"
                     /protein_id="HEM2317024.1"
                     /translation="MEKRLLDFEVGETVDLFLLIKSSVKGTASNGKPFLSLVLQDKSG
                     ELEAKLWDVKESDEANYGVQQIVHLMGDIQNYRGRKQLKIRQIRQATALDGVSASEFM
                     ETAPINKEEMADEITQYIFEMKNANLQRITRALLKKYQDDFYDYPAAMRHHHEFVSGL
                     SFHVVSMLRLAKSVADLYPSVNRDLLYAGVILHDLGKVIELSGPVSTTYTLEGNLIGH
                     ISIVVEEVSKIADELSIDGEEVVVLKHVLLSHHGKGEWGSPKPPLVREAEILHQIDLM
                     DASLNMMDKVLKHTKPGEFSERVFGLDNRSFYNPIFE"
     gene            complement(12415..13296)
                     /locus_tag="U0308_002064"
     CDS             complement(12415..13296)
                     /locus_tag="U0308_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="foldase"
                     /protein_id="HEM2317025.1"
                     /translation="MKKKLILGLVMMMALFSLAACGGGGDVVKTDSGDVTQDELYDAM
                     KDKYGSEFVQQLTFEKILGDKYKVSDEDVDKKFNEYKSQYGDQFSAVLAQSGLTEKSF
                     KSQLKYNLLVQKATEANTDTSDKTLKKYYETWQPDITVSHILVADENKAKEVEQKLKD
                     GAKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYG
                     YHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKDANVKVEDKDLKD
                     AFKDFDGSSSSDSDSSK"
BASE COUNT         4719 a         2248 c         2651 g         3751 t
ORIGIN      
        1 tatttaatac cgtgtagaag ataggagagt tacatggaca aattcaaaca gcaactaatt
       61 aaatacttaa aattattctt tggttttata ggaaaatggc ttagcaaagg atggcagaaa
      121 tttagacgtt tctggaaaaa caaacatatc ggaaagattt ttttactagc tggacttgta
      181 tttttattaa gttttatcat ttatcttgta atagtagcaa aatctgccga catagatgca
      241 ctaaaaaaag gcttagagtc agccacgatt atttatgaca aagatggcga caaggcaggg
      301 gagctttctt ccactgatgc aacatttgta tccatcgata aaatatctaa aaacttacaa
      361 aatgcagtag tttccattga agatagaaaa ttttatgaac ataaaggttt tgacttgaaa
      421 gggatagctc gggcgggtgt taatttagtc actagcggag gcatttctgg tggcggtagt
      481 acgattacac agcaactcgc caaaaatgct ctactgacac aagaacaaac cttcacacga
      541 aaagccaaag aaatatttat ggctcgtgaa atcgaaaaaa cctactcaaa agacgaaatt
      601 atggaaatgt acttaaaccg ttcttacttt ggtaatgggg aatggggagt agaaaatgct
      661 tccttaaaat attttggtaa atcagcggca gacttaaaca taccagaagc tgcgacaatt
      721 gctggattgc ttcaagctcc aagtgcgtat gatccatacc aacatatcga caaagcgact
      781 aatcgccgca acatggtatt aaatgcaatg gtcgaaacag gcacaatttc aaaagcagaa
      841 ggcgataaat acaaagctac aaaaatagtt ttaaatgatc aatcaaaaga tccacttgcg
      901 aataaatatc catggtacgt cgatgcagtt attaatgagg ctgtaaatga agcagatata
      961 acgcaagatg aaatcatgca aaaaggatat aaaatctata cggaattaga tcaaaattat
     1021 caaacttcct tagaaaatgt ttacaacaat gatgggttat tcccttctaa tgcaaatgat
     1081 ggcacactag ttcaatcagg agctgtttta atggatccag ctactggagg cattagagcg
     1141 cttgttggtg gacgcggaga acatgtcttc cgtggtttca accgggcgac acagatgaaa
     1201 gcacaaccag gttccacaat gaagccactt gcggtataca caccggcgct tcaatctggt
     1261 tatgacgtgg attcaatgct aaaagatgaa aaaataacct acaaaggtaa ctacacacca
     1321 accaatgttg gcggcgttta tagtggagaa gttccaatgt ataaagctgt agccaactcg
     1381 attaatgccc ctgccgtttg gttacttgat caaattggta ttgataaagg tgtaaaatct
     1441 gtcgaaaaat ttggtattac agttccagaa aaagatagaa cgcttggact tgcactcggt
     1501 ggtatgagta aaggtgcttc gccagtagaa atggcaacag cgtatgcaac ctttgctaac
     1561 aatggtgcca aaccggaatc tcatattatt actaaaattg tcgatccatc aggcaataca
     1621 gtttacgaaa atgttcctaa aactaaacaa atcatttcag aaacagtatc taatgaaatg
     1681 acttccatgc ttttagatgt tatcaataca ggaactggtc aaagtgcagc tgtttccggt
     1741 cacgaaatgg ctgggaaaac aggttccacg caagttccat ttgatgatac aagcggtact
     1801 aaagatcaat ggtttgttgg ctacacgcca aacctagtcg gagccgtttg gatgggatat
     1861 gataaaactg acaaagagca ttacctaact acaaccagtt ctgctggtgt ttctagtttg
     1921 gctcactacg taatgaatag tggtttgcag tatcagaaat ccgcagactt tagtacgaag
     1981 agtgctgcac aagaaactgc agcgaaaaaa gaagaagaag aaaaagagaa gaacagtggt
     2041 agcgactttt ggagtggcgt gaaagaaaaa gccgatgaag ctggagaaac aatcaaaaaa
     2101 ggcgcagata aagtaaaaga attcggtgga aaagtttctg atggcattgg aaacttaatc
     2161 gactcgatag gtaattaaat tcaaagcaca ttttactatg ttaactctag taaaatgtgc
     2221 ttttttgtat tgcattaata ttataactgt tatacaataa gtataacaaa agaatgaggt
     2281 gagtacattg gataaaacgc aaatcgcatt aattataccc gtaattcttc tctatttagc
     2341 tttattatta acagctatta ttgacttaac aaaaaactgg aatgaacgaa aaaatccggt
     2401 tatctggcta gttgttatta tcgttatcaa catttttggc ccaattgcct actttatttt
     2461 tggccgaaaa gaggaaggta actaatgaaa aaattagaaa ttcaaggact aaagaaaaaa
     2521 tataatggca agtgggtcat taaaggaatt gatctcacaa tcaatgaaaa agaatgcgtg
     2581 gcacttatcg ggcctaatgg tgcagggaag tcaaccatga ttaatatgat tgtccaaatc
     2641 ttaacgcagg atgaaggaca aattacttta gacggtcaaa atgcaaaatc agttcgcgaa
     2701 aaaattggtt ttttaccgca atatcctgaa ttttatggtt ggatgagtgc gacagaatgc
     2761 cttcatttta tgggaaagct atctaacatg gaaaaaacag atttaaaaac acggattaaa
     2821 gaagtattaa tactagtagg cttagaagag agtgcaaata aaaaaattag cacgtattca
     2881 ggtggaatgc gacaacgact cgggattgct caagctattt tgcatcgacc agaacttctt
     2941 gtactagatg aaccagtatc cgcccttgat cccatcggtc gccgggaaat gatgttgcta
     3001 ttagacaaac taaaaaaaga gattactatc ctattttcca cacatatctt aaaagatgct
     3061 gaagaaattt gtgaccggat tgccatcatt aaaaatggcg aactggtctc agataagaca
     3121 gtagtccaac ttatggaaga agaaagctcc cctgtgtttg atgtcgaatt tagcggagat
     3181 agtgaagctt ggcaaacgtt actgcttcaa aatgaacatg tggagaaaat tgaaagagtt
     3241 ggaatggttt atcaagttta cacaactaac caaaaagctg ggtcagaagc tattttgaaa
     3301 tctttattac aaatagaagg tgaatttatt cgtgtcgaaa acagacacca aagcttagag
     3361 gaaatcttta tggagaaggt gggcaaatga cacattttaa tgctttatta gcaagagaat
     3421 ggctggaaca acgtcgaagt ttaaaaatta tttggcttcc gattgtattc gcacttcttg
     3481 gcctcactca accactaatg atgtattttt taccagaaat tctaaaagca gttggcacgg
     3541 gagcggaaac ggagcaagta attgcattaa tgggggatca atcggctcag gaagtgatgg
     3601 cacaaacact cggttcccag tttgatcaaa ttggcattat cattatcatc gttgttgcga
     3661 tggcttgcat tcaaaatgac cgaactagag gcatgttagc gtttatcatg acaagaccag
     3721 tgagcgctgc ggaatatgtt ttatcgaaat gggtaatgca atgtatggtg gggttaagtt
     3781 cacttttaat tggctatgtg ttggcggctt attatacgta ctttttattt ggagaactag
     3841 cgatcaattc tttaacgcag gcattttttg tgtacgccat ctggtttatt ttcgtaatta
     3901 gcttggttgt ttttgcgagc gcggtttttg atagtaatgc cgttgttgcg atgattagcg
     3961 tgtttatagc aattgtttta ggggtaatca gtggttttgg cggctggatt caaatgttta
     4021 atccagcata tctaagtaaa aatgcaacaa tgctaattat gtctgataag acgatggatt
     4081 attttattcc aacactttgt attactatct tatggatttt cgcatttata agtctaacta
     4141 tcctaatgat aaaaataaaa ccactcccaa aaacggaata gcgaacattt ttcatgtgtt
     4201 ttgcgaaaac atccgcttta tactaaaata gaataaaaag gggtggcgac atggaacgaa
     4261 tagagcgaga tacgcttgga gaaatttctg tagatgcgac gaaatattgg ggagcgcaaa
     4321 cagaacgaag taaaaggaac tttgctattg gtgataatcc tatgccgata gaaattatat
     4381 atgcttttgc tcaattaaag aaagccactg caaaagtaaa cgcagcagaa ggaaaactat
     4441 ccgaagaaaa agcgatagcg attggccagg tttgtgatca aatcattcaa ggagaactag
     4501 atgagcattt tcctttagtc gtttggcaaa ccggaagcgg aacgcagagc aacatgaatg
     4561 tcaatgaagt tatcgcacat gttgccaact taactttagg cgaaggacaa attcatccga
     4621 atgatgatgt caacatgtcg caaagctcga acgacacatt tccaacagcg atgcatatcg
     4681 ctgcatacgg ggctttagta acaaaacttt tacctgaaat aactaaaatg gaagctgttt
     4741 tggcagagaa gaaaaataaa tacatgcatc tcgttaaaat tggcagaaca catttgcaag
     4801 acgcaacccc attaacactt ggccaagaaa ttagtggctg ggaagcatgt cttacaaata
     4861 ataaaaacta tcttgaaaca agtatgaaag caattttgcc acttgcgatt ggtgggacgg
     4921 cagttggaac tggcttaaat gcctcacgtg attttggtga taaggttgcc gaagaattga
     4981 tgaaacaaac gggatatcct tttacttctg attccaataa gtattttgct ctaactagtc
     5041 atagtccgat taattttgtt catggatcca ttcgtagcct tgcttcggat ctaatgaaaa
     5101 ttgctaatga tatccgttta ttagcaagtg gaccacgtag cggcataggt gagttaacaa
     5161 tcccagctaa tgaaccagga agctccatta tgccaggaaa agtaaatcct actcaatgtg
     5221 aagcaatgac gatggtagcg gctcaagtca tgggaaatga tgtgacaatt aatgttgccg
     5281 ccagccaagg aaactttgaa ctcaatgtct acaagccagt tatcattttt aatttcttag
     5341 aatctgtcaa actgctttca gatagcatgc gttcgttccg attgcattgt ttggaaggac
     5401 ttactgcgaa tgaaaaagtt attgaaacaa aagtaaatga ctccctaatg cttgtgacag
     5461 cattgaatcc gcatatcggc tatgaaaaag ctgccaaaat tgccaagctg gcttttgatg
     5521 aaaatacgac attaaaagaa gcggcaatca aaaccggttt tgtgacagaa aaacaatttg
     5581 atttatggat tgatccgtta aaaatgacta atttgtaatc tcatacttta gaatgaactt
     5641 ccctagaaac aattgttgtc tagggatttt tcacgtataa tgaaaccact tttactagac
     5701 aaatattagg agatgcaaaa catgtcagtg ttatttacga tacttttaat ggctgtgatt
     5761 ggcggattta tcggcgcaat gacgaattat atcgccatac gaatgctttt tcgcccttac
     5821 aaagccattt acctatttaa taaacgttta ccatttactc caggtttaat ccctaaacga
     5881 cgtgatgaac tagccgaaca catcggaaaa gtagtagtga gtcatttgct tacagaagac
     5941 gccattcgtg ctcgtctgct agatgagaat ttacaaaaag aaataacaga tactattacg
     6001 aaaatgttcc atgaaaaaat gcaattagaa accacaccca atgaactcct ccatcatttc
     6061 ggttatgaaa atgcagaaat tcgttctatg acatgggtag aaaaaacttt agagaaagaa
     6121 atcaaccact ttctaactac taaaaaaacg acaaaaatga gcgatttaat tccaactatg
     6181 ttagagtcag aactaacaac taaactaccg catgtaacag aaagaatcac gagcaaaatg
     6241 acattgtttg tatcgagtga agaaggcaaa attcaaatta aacaaatgct acaaaaattc
     6301 tttgaagaac acggcaaaat gggaagcatg gctagaatgt ttattaatat tgatagcttt
     6361 tctgaaaaaa ttcaacaaga aggcttaaaa ctcatcgggc aagaagacac taaaaatcta
     6421 attaatcaac ttctaacaac agaatggaaa aatttcgaag caaaagaatt acaagagctt
     6481 atcccgactg aaaagcaagc tcatttagct ggacaactta cttctgaact tatccaaact
     6541 tttcctcacg agaaattatt taatcaaccc attcaagaga tgctacgtgg ctatgaagca
     6601 gctattacag aaaaagtaat tccttttgca gtagagagga tgcttgattt tgtagcaaca
     6661 catagtgcag aaatagtaga gagaatggat ttggcgaaac tcgttgaaac acaaattgcc
     6721 actttttctt tacctgaaat cgaaaaactt gttgtagaga tttctggtag agagttaaaa
     6781 atgattactt atttaggtgg gattttaggt ggatttattg gaattatcca aggtgttctc
     6841 gcaatgtgga tttagttctt ttatactgga ataaccggcg actttttgtt atagtgaaac
     6901 agaagtgaca aatacagata tttggaggat ttatcaatgg cagttaatat ttatgattta
     6961 gcacatgatt tagacaaagg aattcgtgaa acacctgaat tcatcagctt acaagatgca
     7021 taccgtgaag taaacgaaaa tgcagatgca aaagcaaaat tcgaacgttt tcgcgatgtt
     7081 caagtaacta tccaagaaaa acaaatgact ggtcaagaaa ttgacgacga aacagtagat
     7141 gtagcacaac aagtagcgca agaagttcaa gaaaacgaac taatcgttaa attaatggaa
     7201 aaagagcaag cgatgagtac aattatcaat gatctaaatc gcattatcat gacgccatta
     7261 caagatcttt ataatgtagc taatgattaa ttttcattaa accaagtggc tctattattt
     7321 gttatttatt tagcagataa tagggtcatt tttttattgg aaatgcttgt acctaacgta
     7381 atagtaagat ataataagaa cgtatattcg gtttttatag gaggcgaaag tcatgaaaga
     7441 aatccaattt ttacatatgg ctgatttaca tttagatagt cctttcatcg ggctttcgac
     7501 actaccacag ccactttttt ctgccataca agaaagcaca tttcaatcat tagaacgaat
     7561 tacaactgtg gcgataaaag aagcagtaga tttcgtttta attgctggag atatatatga
     7621 tagtgaagat caaagtgtcc gtgctcaagc gcgtttttca aaagaaatga aacggttaga
     7681 agtggcgaac atccccgtgt ttatgattca tggaaatcat gattttatag aaaagcataa
     7741 agaaaaactc acattaccaa gcaatgtgca cgttttttca gagcaagtag aagtaatgtc
     7801 gcataaaacc gccactggtg tgagcgttaa tatttatgga tttagttata atgaacgtca
     7861 tattcgctca agccgagtag ataaatacaa gattcaaggt aatgctgatt ttcacattgc
     7921 gttattacat ggctcagaag tatctagtag cgaagaacat gatgtgtacg ccccatttcg
     7981 tgtacaagaa attagcaaaa aaggttttga ctactgggca ctaggtcata ttcataagcg
     8041 acaattgctt gcagagtctc ctagcattta ttacccagga aatattcaag gtcgaaatcg
     8101 caaagaatca ggtgaaaagg gcgccagtat cattacatta tcagaagcaa gtacaaccat
     8161 tgatttcatt ggaacaagtc cgattatttg ggaagaagct gtaattacct taccagaaaa
     8221 tagtgagata aatgcctttt accgagaaac tactaagttg ttagagagct atcaaggaag
     8281 aagtcactct tattttcttc atataattgt taagatggaa aataaacaaa aaatcgatac
     8341 gaatgattgg ttacaaatgc ttcaagaaga agtagaaatc acagataaca catttgtatg
     8401 ggtacacaaa ttaacaacgg agataacgaa tcaaagtaat tcacaaacat ggtacgaatc
     8461 acatttagca ggagaagaaa tcaagcattc gtttgagaca ctacaagatg aatctgcttt
     8521 ttatcaagca gtagaggctc tgtatcttga aagtggagtg agtagatact tggatgattt
     8581 gtctgaaatt gatcgtgaga ggctactaca tgatgcttta atggaattag ggaggacgct
     8641 tgcagaagtg gaaggtgatg ataaatgaga ataacatcta ttgatatcat tggttacgga
     8701 aaatggtccg atgctcattt taataatatt gccaatttcc aagtattcta tggtgaaaat
     8761 gaagccggaa aatcaactat tatggctttt atacatagta ttttgttcgg tttcccaacg
     8821 aaacaacaat cgataccgcg catggagcca aaaaacggtg gaccatatgg tggaagatta
     8881 acactagaag acacaccttt aggaaaagtc atcattgaac gcttgaaagg aaaagcaacg
     8941 ggagatgttc ggatatatta cggggatggc caaaccgctg gagaagaaaa attaccagaa
     9001 attatcggtg aaattgatcg aaacacttat gaggctattt tttcatttga tatacacgga
     9061 ctacaaaata ttcatcaatg gaaaaagaaa gaatttgaac gctatttgtt agcaactgga
     9121 acaacaggat cggacgctct tctaaaggga gccgaagcat tacaaaaaaa attagatagt
     9181 ctatataaac caagtgggcg aaatccacta attaaccaac aactaaaaaa agtaaaagaa
     9241 gcccaacacg cttttcaaaa cgcaaaaaaa caaaatgcgc aatatgaaca attaatcaat
     9301 gagaaagagc aagcgatagt aagacaaaca gagctacaaa aagaaaaaac aacaatgcga
     9361 gttgagttag atgcattagc aacattagcg gatttgtggc cgttatacca agaatggaaa
     9421 gcactcagta acaaagcttc tgaaacaaca gaagctactt ttccgcctga tggagttatt
     9481 cgtttagaac acttgaatct ccgagaaaaa gaatggcaaa atcaacttat ccaactagaa
     9541 gaacgccaaa aaaatctaat tagcaacaat aattatgaac atagtgcttt ttttgccgaa
     9601 aatgaagcag aagttactta tctaatcgaa acttatgcag cttttggaga gcgagaaatc
     9661 cagttaaaga atttaaagca agagattaag tttcagcaag tcgacacaaa acaaccactt
     9721 agaatatggt cgagcgaatt agaacaaaca atgattcact taaaagaaaa agaacagtcc
     9781 cacaaagagc aacaacatga tatccagcta aaattaaaat tcactaataa ctccgaagaa
     9841 aaactccaaa aaaagattga tcaaatagaa gcggagatgt gggataataa aacattccaa
     9901 caagcaaaag aaaaaatgca ggatagtcct aaaacttcta aaactaagac gatggtttcc
     9961 ttgggcatat ttgcagtagc gttcgtcttg atgatagttt tccaagctat ttggagtgta
    10021 gcacttgttt ttgtttctgc acttatagtg ggttatgctt ttattactac tggaaaatct
    10081 tctccaacaa ataatgagca aattctagct tttttagaac aaaagaaaat aagacaagaa
    10141 tggcaacaac ttttgaacga aatggatatg gttgcttcac aaattgctga attaagagca
    10201 gctgagaata aactaagcga aaatatctac caacatacga tggaacttag acacttcttt
    10261 tctgacttgg gaataaacac tgaacctagt tcgaactggc attacgaact tagcatctac
    10321 aaaaaaaaca gtgaaaaaag gcaattagca atggaactta tctccaaact agaaccatta
    10381 gcagagaagc aagaagcata tagagcaaga ttagaaaact taaaattgcc tatagattat
    10441 acggacacgg aagaaaaaat tacttttctt cgtcaaggtt tgctctatta tcgaaaccac
    10501 ctaactgaaa atgcaaagct cgctgaaaaa ttagaacaag taacgatgca attagactta
    10561 gttaaacaag atttattact tgtaaagaaa gaaaaggcag acttgctaga acgtgcgaat
    10621 gtgagtaacg aagaagactt tcgtatggct gcaatgcgcg taaaagaaga acagaagtgg
    10681 cgtgaacgat tagttttaat agaagcgcaa cttgaaccag aaaagcgaga agctctaaat
    10741 agatatgaaa atcaagcaac tatcaaagaa aaagagctcc aattagaaga atcactgcgg
    10801 caaatagaat tagaacaaga gcaacttcac gcctcactcg cagcacaaaa ccatgcaata
    10861 gacaaattgg aagaaggcgg gactttcgct gtattgatgc aagaatttta ttcagaaaaa
    10921 agcaaattac aacaaatctc agctgagtgg acagaaacaa aactagcgct tcaaatgttg
    10981 caaaacacga tgcagcagtt acaagaagga aaacttccaa aaacattaaa actggcaagt
    11041 gaatatttta atcacttaac tagtgggaac tataggaaag tatacttaca agataatagg
    11101 cttcaagtag aaagtaagga tagaattccg ttcttcccgg aagaacttag ccaagcgact
    11161 aaagagcagc tatatttggc tattcgtttt gcgctaattg atgttattca caaagacttt
    11221 ccactaccaa tcattattga tgatggattt gtgcattttg attcctcgag aatggggcaa
    11281 atgatgcagc tgcttcaaaa acgaaaaagt gaaaaccaag tcattttttt cacatgccat
    11341 caagaaactc gcaaatattt ttccagtgag gacatacgcg tgctataatg ggtgaagaaa
    11401 cttcttacta cagaaagaaa gaaggcgata taatggaaaa aagattatta gactttgaag
    11461 ttggggaaac agtagactta ttcttgctaa ttaaatcaag cgtaaaagga acggctagca
    11521 acggaaagcc cttcttgagc cttgtcttgc aagataaatc aggtgaatta gaggcaaaac
    11581 tatgggatgt taaagaaagt gatgaagcga attacggggt acaacaaata gttcatctta
    11641 tgggtgatat tcaaaattat cgtgggcgaa aacaattgaa aatccgccaa attagacaag
    11701 ctacagcact ggacggtgtt agtgctagtg aattcatgga aaccgcgcca attaataaag
    11761 aagaaatggc tgatgaaatc acacaatata ttttcgaaat gaaaaatgcg aatttgcaac
    11821 gaattacgcg cgcattgctt aaaaaatatc aagatgattt ttatgattat ccggcggcaa
    11881 tgcgtcatca tcatgaattt gtttccggct tgagttttca tgtagtttcg atgttacgac
    11941 ttgcaaaatc agttgccgat ctttacccat ctgttaaccg agatttatta tacgcaggtg
    12001 tgattttaca tgatttagga aaagtcattg agctttcagg ccctgtatca acgacgtata
    12061 cactagaagg taatttaatt ggccatattt ctatcgtagt agaagaagtg agcaaaattg
    12121 cggacgaact ttcgattgat ggtgaagaag tcgtagtttt aaaacacgtt cttctatctc
    12181 atcatggtaa aggtgagtgg gggagtccaa aaccaccgct tgttcgagaa gccgagattt
    12241 tacaccaaat tgatttaatg gatgcttcct tgaacatgat ggataaagta ctaaaacata
    12301 caaaacctgg tgaattcagt gaacgagtat ttgggttaga taatcgttcg ttttacaatc
    12361 ctatatttga ataaaaaaac acgcttggaa atttccaagc gtgtttttta gtgcttattt
    12421 agatgagtcg ctatcactgg atgaagagcc atcaaaatct ttaaaagcat ctttcaagtc
    12481 tttatcttcc acttttacgt tagcatcttt gtattctttt ttaagcgttt tttgcatgtt
    12541 ctcagtagtt agttgagact caaggtaaga agcttttaca gcttttttat ctttttcgaa
    12601 agttgttttt gttgcaggtt tgtccatttg gatgatgtgg tatccgtatt gtgtttttac
    12661 tggagcgctg atgtcgcctt tgtttttaag ggcataagct gctttttcaa atgcaggatc
    12721 catcttacca ggaccgaatg gagctaattg tccaccattg tctttagtag cagtgtctgt
    12781 agagtattct tttgctaaat cagcaaattt tgcgccgtct ttcagttttt gttcaacttc
    12841 tttggctttg ttttcatcag ctacaagaat atggcttaca gtaatatctg gttgccatgt
    12901 ttcatagtat tttttaagtg ttttgtcgct agtatcagta ttggcttcag tagctttttg
    12961 aactaacaag ttgtacttaa gttggctttt gaatgatttc tccgttaagc cactttgagc
    13021 taaaactgca gagaattgat ctccgtattg tgatttatac tcgttgaatt tcttatcaac
    13081 atcttcgtcg cttactttgt atttatctcc aagaattttt tcgaaagtaa gttgttgtac
    13141 aaactcagaa ccatatttat ctttcattgc gtcgtaaagc tcatcttgcg ttacatcgcc
    13201 agagtctgtc ttaacgacat ctccaccgcc accgcacgct gctagactga acaatgccat
    13261 catcatgaca agtccaagaa ttaatttctt cttcattaaa taaaacacac tccttagttg
    13321 ttggaataat tcccgcttaa cacaataact atcataacat aaattaaag
//
LOCUS       DASDYK010000078        13343 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.078, whole genome shotgun sequence.
ACCESSION   DASDYK010000078 DASDYK010000000
VERSION     DASDYK010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13343
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.078"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..476
                     /gene="dnaN"
                     /locus_tag="U0308_002065"
     CDS             <1..476
                     /gene="dnaN"
                     /locus_tag="U0308_002065"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEM2317026.1"
                     /translation="TLANNQILFKLKDLLFYSRLLEGSYPDTSRLIPTDTKSELVINS
                     KAFLQAIDRASLLARENRNNVIKLMTLENGQVEVSSNSPEVGNVSENVFSQSFTGEEI
                     KISFNGKYMMDALRAFEGDDIQISFSGTMRPFVLRPKDAANPNEILQLITPVRTY"
     gene            584..1927
                     /locus_tag="U0308_002066"
     CDS             584..1927
                     /locus_tag="U0308_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM2317027.1"
                     /translation="MMKDMTTGNPTKLIFLFAMPMLIGNLFQQFYTMIDAVIVGKFVS
                     VDALAAVGATNSVNFFMISLIIGLMSGISVVVAQYFGFKDFDRLKDVIATATYAVVFS
                     AIILTVAGVLLAKPLLILLRTPANILDDSTIFLTTLFIGILPMSLYNGMAAILRALGN
                     SITPLIFLILSSLMNIALDFLFVVYMDMGVRGAAIATVLSQTAAAIAVIYYAYRHVPF
                     MRIERAKFKLSTPLLKEMVRIGLPSGLQGSFISIGNMALQSLINGFGSSVVAAYTAAS
                     RIDSLTYQPGIAFGAASSMFAGQNIGAGKIDRVREGFWSGIKVVTAISIGITILVQLF
                     AREFLLLFVDSSETEVINIGVSYLLIVSLFYVVVGVLFVVRETLRGTGDAMVPLAMGI
                     FELVSRLVIGFVLSLYIGYIGLWWATPVAWITATMLGVWRYKSGAWQKKAVIRRK"
     gene            2107..2328
                     /gene="yaaA"
                     /locus_tag="U0308_002067"
     CDS             2107..2328
                     /gene="yaaA"
                     /locus_tag="U0308_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein YaaA"
                     /protein_id="HEM2317028.1"
                     /translation="MAETVKINSEFVTLGQLLQMIDVVSTGGMAKAYLSENTIYINGE
                     QDNRRGKKLRNGDVILVPGVGKVKIEQGK"
     gene            2332..3444
                     /gene="recF"
                     /locus_tag="U0308_002068"
     CDS             2332..3444
                     /gene="recF"
                     /locus_tag="U0308_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HEM2317029.1"
                     /translation="MHLESIVLRNFRNYENLELEFSPSVNVFLGENAQGKTNLLEAVL
                     MLALAKSHRTTNDKDFIMWEKEEAKMEGRIAKHGQSVPLELAITQKGKRAKVNHLEQK
                     KLSQYVGNLNVVIFAPEDLSLVKGAPGIRRRFLNMEIGQMQPIYLHNLSEYQRILQQR
                     NQYLKMLQMKRKVDPILLDILTEQFADVAINLTKRRADFIQKLEAYAAPIHHQISRGL
                     ETLKIEYKASITLNGDDPEVWKADLLQKMESIKQREIDRGVTLIGPHRDDSLFYINGQ
                     NVQDFGSQGQQRTTALSIKLAEIDLIHEETGEYPVLLLDDVLSELDDYRQSHLLGAIE
                     GKVQTFVTTTSTSGIDHETLKQATTFYVEKGTVKKS"
     gene            3493..5433
                     /gene="gyrB"
                     /locus_tag="U0308_002069"
     CDS             3493..5433
                     /gene="gyrB"
                     /locus_tag="U0308_002069"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEM2317030.1"
                     /translation="MSEENITNVQENASDYNEDQIQVLEGLEAVRKRPGMYIGSTSQR
                     GLHHLVWEIVDNAIDEALAGFCTEIEITIEADNSITVRDNGRGIPTGINEKIGRPTVE
                     VIFTVLHAGGKFGGGGYKVSGGLHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDV
                     VMDMEEQGETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISIEDK
                     REEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEISMQYNTGFSS
                     NIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLSGEDVREGLTAI
                     ISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEKGVVASR
                     ARLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQGRDR
                     LFQAILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGGDFDVSKSRYHKLIIMT
                     DADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLEDY
                     LASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMG
                     DRVEPRRKFIEDNAQYVKNLDV"
     gene            5528..8056
                     /gene="gyrA"
                     /locus_tag="U0308_002070"
     CDS             5528..8056
                     /gene="gyrA"
                     /locus_tag="U0308_002070"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEM2317031.1"
                     /translation="MAETPNQRITEINLNKEMRTSFLDYAMSVIVARALPDVRDGLKP
                     VHRRILYAMNDLGMTSDKAYKKSARIVGEVIGKYHPHGDTAVYFTMVRMAQDFSYRNM
                     LVDGHGNFGSVDGDMAAAMRYTEARMSKISMELLRDINKDTIDYADNYDGSEREPVIL
                     PARFPNLLVNGSSGIAVGMATNIPTHHLGEVIDGVLALSHDPDITIRDLMEYIPGPDF
                     PTAGMIMGRSGIRRAYESGRGSITVRGRVDIEEKKNGKETIVITEIPYQVNKARLVER
                     IAELAREKKIDGITSLNDESDRSGMRIVIEVRRDISASVIVNNLFKMTALQTTFGINM
                     LALVDNHPKVLNLKEILYHYLEHQKVVIRRRTEFELRKAEARAHILEGLRIALDNIDA
                     IIKLIRGSKTSDVAKEGLMTQFNLSDKQAQAILDMRLQRLTGLEREKIEEEYQNLVAL
                     INDLKAILADDERILEIIREELEEIKVKYADKRRTEILAGDLVSLEDEDLIPEEEVAI
                     TLTKRGYIKRLPLSTYRSQRRGGRGIQGMSTHEDDFVEHLVATSTHDTLLFFTNTGKV
                     YRSKGYEVPEYGRTAKGIPIINLLGIESQEQVNAVINLSEFTDDSYLFFTTKHGVVKR
                     TTLSQFAKIRQSGLRAVELRENDELISVQMTDGSKNMIIATKHGQSIYFPEENIRVMG
                     RTAAGVRGIRLREDDEVIGMEVLEDDEKVLVVTEKGYGKQTPASQYPLRNRGGMGVKT
                     VTITEKNGNLVAMKTVTGEEDLMLMTVSGVLIRFEIDTVSQTGRSAMGVKLIRLDEDE
                     KVATVAKVPKEEDEVELEEEIDETLITQVPDESFEDAPGSDIEE"
     gene            8190..9704
                     /gene="cls"
                     /locus_tag="U0308_002071"
     CDS             8190..9704
                     /gene="cls"
                     /locus_tag="U0308_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HEM2317032.1"
                     /translation="MRKLIQFLFIAVVLFLVEYFLINQAAILFLVTSGLIQLCGLIIV
                     IRLLLFDQRNTSSKVAWIAVIFILPVLGTISYLVFGRNPATRKFSTAQVMEKAKLINA
                     IHAIPNNTNEKLPRLSKRIAHLTSIEPIKGNKIEILTNGEETFPVLLDALRKAENHIH
                     IQYYIFKTDEISTEIRDILVEKAKSGVEVRFMFDGLGSSKLHKAFLAPLKEAGVSIHA
                     FDPITSPWIVRTANLRNHRKIVVIDGQIGFTGGLNIGEEYRSNTPDFRVWRDTHIKIT
                     GQAVIELQESFLNDWVYMENQAGAADQFISEAGLQQYFSPVDVGDEWAQVIYGGPYDK
                     EKWVRDSMLDLIDSAKESVWIVSPYFVPDEESLAVIRRVAMSGVDVRVIIPGKGDRGI
                     SFHGSNAYVKTMIEAGAKMYAYADDSFVHAKAMLVDGTRAAIGTANFDVRSFRLNHEL
                     MVFLYDESEAMHHLKRDFEKDFEDSRLFTMKDMENKPLLTRIKEVLSSLLSPIL"
     gene            9720..10238
                     /gene="speG"
                     /locus_tag="U0308_002072"
     CDS             9720..10238
                     /gene="speG"
                     /locus_tag="U0308_002072"
                     /EC_number="2.3.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine N1-acetyltransferase"
                     /protein_id="HEM2317033.1"
                     /translation="MSGDLKLRPLEREDLKFVHRLNNDAKIMSYWFEEPYEAFVELQE
                     LYDKHIHDQSERRFILELDGQMVGLVELMEIDYIHRRAEFQIIIDPKFQGHGYAVSAT
                     KLAMKYAFHVLNLHKLYLVVDKVNEKAIHVYEKVGFIREGELIDEFFVDGTYHDAIRM
                     CIFQHQYQEMDI"
     gene            10380..11348
                     /gene="mvk"
                     /locus_tag="U0308_002073"
     CDS             10380..11348
                     /gene="mvk"
                     /locus_tag="U0308_002073"
                     /EC_number="2.7.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mevalonate kinase"
                     /protein_id="HEM2317034.1"
                     /translation="MATGIGTAKMILCGEHAVVYGEPAISVPFTQAIVTTNVENSTKT
                     KFSSAFFSGDLDDMPDFLAGIKALVVDVLNEIGKGECVSIHVVSGVPIGRGLGSSAAV
                     ATSIARGLYKYFNQELDSKKLLAIVNAAEKIAHGNASGVDAITVVSEKPVWYERDRKL
                     EIMHFSKKITFVVADTGVPSETRDAVKDVQALYKENQTEIGKIIHQLGDISREIKTHL
                     EGDADTVKIGAAMNKAQSYLETLTVSDSSLEKLIEVARSSGADGAKLTGGGRGGCIIA
                     VAKNQEIAEQITKELHNAGAAQEWIFTIGEGSYESDSHRTHECGAN"
     gene            11305..12276
                     /gene="mvaD"
                     /locus_tag="U0308_002074"
     CDS             11305..12276
                     /gene="mvaD"
                     /locus_tag="U0308_002074"
                     /EC_number="4.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diphosphomevalonate decarboxylase"
                     /protein_id="HEM2317035.1"
                     /translation="MRATAIAHTNVALIKYWGKRDEHLILPANSSLSFTVDKFYTKTT
                     VEWDENLAQDTFILNNEQKTDAKVARFIDKMREEFGISAKAKITSENHVPTAAGLASS
                     ASAFAALALAGSSAAGRKDTKEYISRLARFGSGSASRSVFGDFVIWEKGELADGSDSF
                     AVPFTNKLCDKMSLVVAVVSDKEKKVSSRDGMRLTVETSPFFEKWVSAAETDLEEMKQ
                     AILDEDFIKVGEITERNGMKMHATTLGAEPPFTYFQPKSLEIMDAVRELRENGIPAYF
                     TMDAGPNVKVICERENENIVADKLSGLAKNVLICHAGKEASVVSDEK"
     gene            12257..13336
                     /locus_tag="U0308_002075"
     CDS             12257..13336
                     /locus_tag="U0308_002075"
                     /EC_number="2.7.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomevalonate kinase"
                     /protein_id="HEM2317036.1"
                     /translation="MYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVNRYITLTL
                     EDSERNELWIPHYENPVSWPIGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKM
                     VIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNG
                     SCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVPTFSV
                     GWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSSIK
                     ENRRILQELGTKAGVNIETSLLKELADSAENMGGAGKSSGSGGGDCGIAFSKTKELAE
                     KLVNEWEKLGIKHLPFHTGRVQITE"
BASE COUNT         4270 a         2265 c         2896 g         3912 t
ORIGIN      
        1 tgacccttgc caacaaccaa attcttttta aattaaaaga tttattattt tattctcgtt
       61 tacttgaagg tagttatcca gatacatctc gattaattcc aactgatact aaatcagaat
      121 tagtcattaa ttccaaagca tttttacaag caattgaccg tgcgtcccta cttgctcgcg
      181 aaaatcgtaa taacgttatt aaattaatga cgctagaaaa tggccaagta gaagtatcat
      241 ccaattctcc agaagttggg aatgtttctg aaaatgtctt cagccaaagt tttactggcg
      301 aagagatcaa aatatctttt aacggtaaat acatgatgga tgccctacgt gcttttgaag
      361 gtgatgatat tcaaatttcc ttctccggta caatgagacc attcgtactt cgaccaaaag
      421 atgcagccaa tccaaatgaa attttacaat taatcacgcc ggttagaact tactaatctc
      481 gcaaaaagca catccgtctt ggtttcaagg cggattcttt ttttgttata gtacagtttt
      541 tggatagaaa tgtatattta tgcaaacgga ggtaattctt agcatgatga aagatatgac
      601 aacaggtaat ccgacaaaat taattttttt attcgcgatg ccgatgttga ttggaaactt
      661 gtttcagcaa ttttatacga tgattgatgc tgttattgtt gggaaatttg tcagtgtaga
      721 tgcgctggct gctgttggag cgacaaattc ggtcaatttt tttatgattt ctttgattat
      781 tggacttatg agcgggattt ctgtcgtagt agcgcagtat tttgggttta aagattttga
      841 tcgtttgaaa gatgttattg caacggcgac ttatgcggtg gttttttcgg cgattatttt
      901 aactgttgca ggagttttgc tagcaaagcc attgctaatt ttacttagaa ctccagcgaa
      961 tattttggat gattctacta tctttttaac cactcttttt attgggattt taccgatgag
     1021 tctgtataac ggaatggccg cgatacttcg ggcgcttgga aattcgatta caccgctgat
     1081 ttttttaatt ttatcgtcct taatgaatat tgcacttgat tttttatttg tcgtatatat
     1141 ggatatgggc gttcgcgggg ctgctattgc gacagttctt tctcaaacag ctgcagcaat
     1201 tgccgttatt tactatgctt atcgccacgt accatttatg cggatagagc gcgcaaaatt
     1261 caagctttcc accccactac ttaaagaaat ggtgcgcatt ggactacctt ctggattaca
     1321 aggatccttt atttctatcg gaaacatggc tcttcaaagt ttaataaatg gatttggttc
     1381 atcggtcgtt gcggcatata cggcggcgag tcgaattgat tcacttacat atcaaccagg
     1441 aattgctttt ggagcagctt cttcgatgtt tgctggtcag aacatcggtg ctgggaaaat
     1501 tgaccgcgtt cgcgaaggtt tttggtcggg aattaaagta gttacagcta tcagcattgg
     1561 aataacgatt ttagttcaac ttttcgctcg ggagttttta ttactatttg ttgattctag
     1621 tgagacggaa gttattaata tcggtgtaag ttatttactt attgtctctt tattttatgt
     1681 cgtagtggga gttttatttg ttgttcgaga aacactcaga ggcaccggag atgcgatggt
     1741 tcctttagct atggggattt ttgagttagt ttcgagactg gttatcggat ttgttttatc
     1801 gctttatatt ggttacatag ggctttggtg ggctacacca gttgcgtgga ttacagctac
     1861 gatgctcggc gtttggagat ataaatcagg agcatggcaa aaaaaggcag ttattaggcg
     1921 aaaataacca ttttagtaaa aaaacgccag agaagctcat attttctttt ttttaataaa
     1981 taatatcccc ccattagttt tgctaaaaaa agctgaaaaa cgaatatatg aaaatattct
     2041 ttgtattatt ggcaaaactt tagtaaaata gaaggtagtg ataaaaaaag attgggcgtg
     2101 aaatttttgg ctgaaacagt aaagataaat agcgagttcg taacgcttgg tcaactttta
     2161 caaatgattg atgtagtttc aactggtgga atggcgaaag cgtaccttag tgaaaatacg
     2221 atttacatca acggagagca agacaaccgc cgggggaaaa agcttcgtaa tggcgatgtt
     2281 atcttagttc ccggtgttgg aaaagtgaaa atcgagcaag gaaaataaca gatgcattta
     2341 gaaagtattg ttttaagaaa tttccggaat tacgaaaact tagaactaga attttcccca
     2401 tctgttaatg tttttcttgg tgagaatgca caaggtaaaa ccaacctttt agaagccgta
     2461 ttgatgcttg cacttgcaaa gtcacatcgg acaacgaatg ataaagattt tattatgtgg
     2521 gaaaaagaag aagccaagat ggaagggcga atagcaaagc acggacaatc agtgccttta
     2581 gagcttgcta tcacccaaaa aggtaagcga gctaaagtaa atcatttgga acaaaagaaa
     2641 cttagccaat atgtcggtaa cttgaatgtg gttatttttg ccccagaaga tttatcgctt
     2701 gtgaagggcg ctccaggaat tagacgtcgg tttttgaata tggaaattgg acaaatgcag
     2761 ccgatttatt tgcataatct aagtgaatac caacgaatat tgcaacaacg gaaccaatat
     2821 ttgaagatgt tgcaaatgaa acgaaaagta gatccaatat tactcgacat tttgactgaa
     2881 cagttcgcag atgtcgccat taatttgacg aaaagacgag ctgatttcat tcaaaaacta
     2941 gaggcatatg cggcgccaat tcatcaccaa atttcccgag gacttgagac gctgaaaatt
     3001 gagtataaag cttccatcac gctaaatggg gacgatcccg aagtgtggaa agcagatttg
     3061 ctccaaaaaa tggaatcaat caaacaaaga gaaatcgacc gtggtgtcac gcttattgga
     3121 ccacatcggg atgattctct gttttatatt aatgggcaaa atgtgcaaga ttttggttcg
     3181 caaggtcagc aacggacaac ggcactttct ataaaattag cagaaattga cctaatccat
     3241 gaagaaactg gcgaatatcc ggttcttctt ctcgatgatg tgcttagtga actcgatgat
     3301 tatcgtcaat cgcatttgct cggagctatt gaaggaaaag tacaaacctt tgtaacgaca
     3361 acaagtacga gcgggatcga ccatgaaacg ctcaaacaag caacaacttt ctatgtagaa
     3421 aaaggtacgg taaaaaaatc ctaatctagg ttaatataat ttgatgaaaa agaaagtgcg
     3481 gtggaataat taatgtcaga agaaaatatt acaaatgtac aagaaaatgc ttcagattat
     3541 aacgaagatc aaatacaagt actggaaggt ctagaggcag taagaaaaag acctggtatg
     3601 tacattggtt caactagtca acgcggactc catcacctgg tatgggaaat tgttgataac
     3661 gcaattgatg aagcacttgc tggtttttgt acagaaattg aaattacaat cgaagctgat
     3721 aacagcatta ctgttcgtga taacggacgt ggaattccta ctgggattaa cgaaaaaatt
     3781 ggtcgtccaa cagtagaagt tatctttacc gttctacatg ctggtggtaa atttggcggc
     3841 ggcggatata aagtatctgg cggacttcac ggagttggtg catcggtagt taatgccctt
     3901 tccacatctc ttgaggtata cgttcaccgt gaaggtcaaa aatattacca acgctttgaa
     3961 cgtggtgatg tagtaatgga tatggaagaa caaggcgaaa cggattaccg tggaacaatt
     4021 gttcacttta cgccagatcc acaaattttc acagaaacaa cggaatttga ttttgataca
     4081 cttcgtactc gtacgcgcga acttgctttc ttgaatcgtg gtttaacgat ttcaattgaa
     4141 gacaagcgcg aagaacacaa agttcgtaaa gatttccact atgaaggcgg aattcgttct
     4201 tacgtggagc atttaaataa agcaaaagac gttatccatg agccaccaat ttatttggaa
     4261 ggtgaacgcg atgacattat ggttgagatt tccatgcaat ataatactgg attctcaagc
     4321 aatatcattt cattcgcaaa taacattcat acgtatgaag gcgggactca cgaatctgga
     4381 tttaaaacgg cgttaacacg tgttattaat gactacgcgc gtcgtaataa attgttcaaa
     4441 gatagtgatg ataacctttc cggtgaagat gttcgtgaag gtttaacagc aatcatttcc
     4501 atcaaacacc cagatccaca gtttgaagga caaacaaaaa caaaacttgg aaattcagaa
     4561 gctcgttcaa tcacggataa gctgttttct gaggctttaa ataaatttat gatggaaaac
     4621 ccagatgttg ctaaaaaaat cgttgagaag ggcgttgtag cttctcgtgc acgtctggct
     4681 gctaagcgcg cgcgtgaagt tgctcgtaaa agcagtgggt tagaaatttc tagcttgcca
     4741 ggtaaactag ctgactgttc ttcccgtaac cctgaaatca gcgaacttta catcgttgag
     4801 ggtgactcag ctggtggttc agctaaacaa ggtcgtgacc gtttattcca agctattttg
     4861 ccgattcgtg gtaaaatttt gaacgtggag aaagcgcgtt tagaccgaat tttagctaac
     4921 gaagaaattc gaactatttt tacggctatg ggaactggtt ttggtggaga tttcgatgtt
     4981 tctaaatctc gttaccacaa attaattatt atgactgatg ctgatgttga tggtgcacat
     5041 attcgtacac tacttcttac gctattttat cgttatatgc gcccactgct tgatgctggt
     5101 tatatctata ttgcacaacc accgctttat caaattaagc acggtaaaca aatagaatat
     5161 gtatatagcg acggacagtt agaagactat ctagcttccc ttgacggaga cactaaatac
     5221 agcattcaac gatataaagg tcttggagaa atgaacccag aacaactttg ggatacaacc
     5281 atgaatccgg aacaccgtac actacttcaa gtcaatatca aagacgctat tgatgccgat
     5341 gaaacttttg aaatgttgat gggtgaccgc gtggaacctc gtcgtaaatt catcgaagac
     5401 aacgcgcaat acgttaaaaa cttggatgtt taataaatat ttcccgggta ataattgggt
     5461 tattaattgt ttttaaaagg tttgaactag attcagcctt acttttgaaa gggaggtttc
     5521 tctaacaatg gcagaaacac caaatcaacg aataacagag ataaacttaa ataaagaaat
     5581 gcggacatca ttcctggact atgcgatgag tgtaattgtt gcccgtgccc taccagacgt
     5641 tcgtgacgga ttaaaaccag ttcatcgtcg tattctatat gcgatgaatg acttaggtat
     5701 gacttctgat aaggcctata aaaaatcagc tcgtatcgtt ggtgaagtaa tcggtaagta
     5761 tcacccccac ggcgatacag cggtttattt tacaatggtt cggatggcgc aagattttag
     5821 ttaccgtaat atgctagttg atggacatgg taactttggt tcggtcgatg gcgatatggc
     5881 ggcagcgatg cgttatacag aagcacgtat gtcaaaaatt tcgatggaac ttcttcgcga
     5941 tattaataaa gatacaattg attatgctga taactacgat ggttctgaac gtgagccagt
     6001 cattttacca gcgcgtttcc ctaacttact tgtcaatggt tcgtcaggta ttgcggttgg
     6061 tatggcaaca aacattccta cccaccatct tggtgaagtt atcgacggcg ttttagcgct
     6121 tagtcatgat ccggatatta ctattcgtga tttaatggaa tatatccctg gccctgactt
     6181 ccctactgct gggatgatta tggggcgtag cggaatccgt cgcgcttacg aaagtggccg
     6241 tggttcgatt actgttcgtg gtcgtgtcga tattgaagaa aagaaaaatg gtaaagaaac
     6301 aatcgttatt accgaaattc cttaccaagt aaataaagcg cgcctagttg agcgtattgc
     6361 cgaactagct cgtgagaaga aaatcgacgg tatcacttcc ctaaacgatg aatctgaccg
     6421 ttctggaatg cgcattgtta ttgaagttcg tcgtgatatt agtgcaagtg ttatcgtgaa
     6481 taatttattc aaaatgacag cacttcaaac tacttttggt attaatatgc tcgcacttgt
     6541 cgacaatcat ccaaaagtac ttaatttaaa agaaattctt tatcattatt tagagcatca
     6601 aaaagtagtt attcgtcgcc gtacggaatt tgagcttcgt aaagcagaag cgcgcgctca
     6661 cattttagaa ggtttacgaa ttgcactaga taatattgac gcgattatta aattaattcg
     6721 tggatcaaaa acttccgatg ttgctaaaga aggcttgatg acacaattca acctttcgga
     6781 caaacaagcg caagccattt tagacatgcg tttgcaacgt ttaacaggtt tggaacgcga
     6841 aaaaattgaa gaagaatacc aaaacttagt ggcattaatt aatgatttaa aagccatttt
     6901 agctgatgat gagcgtattc ttgaaattat tcgtgaagaa ttagaagaaa tcaaagttaa
     6961 atacgcggat aaacgtcgta cagaaatctt agctggtgat ttagtaagcc ttgaagatga
     7021 agacttaatc cctgaagaag aagtggcgat tacactaact aaacgtggct atattaaacg
     7081 tttaccatta tcaacttatc gtagccaacg tcgtggtggt cgtggtatcc aaggtatgtc
     7141 tactcatgaa gatgatttcg tagaacatct tgttgcaacg agcacgcatg atacgttact
     7201 attcttcact aacacaggta aagtttaccg ttcgaaaggt tatgaagtac ctgaatacgg
     7261 tcgtaccgcc aaaggtatcc caatcatcaa cttacttgga atcgaaagcc aagaacaagt
     7321 gaatgccgtg ataaatctat ccgaattcac tgatgatagc tacctattct ttactactaa
     7381 acacggtgtc gtgaagcgta caaccctttc tcaatttgcg aaaattcgtc aaagtggtct
     7441 tcgtgcagtt gaacttcgcg aaaacgatga actaatctct gttcagatga cagatggtag
     7501 caaaaacatg attatcgcaa cgaaacatgg acaatctatc tacttcccag aagaaaatat
     7561 ccgcgtaatg ggccgtacag ctgctggtgt tcgtggtatt agacttcgtg aagacgatga
     7621 agttatcggt atggaagtcc ttgaggatga tgaaaaagtt ctcgttgtaa cggaaaaagg
     7681 atacggtaaa caaacaccgg cttcccagta cccgcttcgt aatcgcggtg gtatgggtgt
     7741 taaaaccgtt acaatcacag agaaaaatgg taacttagtc gcaatgaaaa cagtgactgg
     7801 tgaagaagac ttaatgctaa tgacagtaag tggcgtatta attcgtttcg aaattgatac
     7861 agtatcacaa acaggtcgta gcgcaatggg tgtcaaacta attcgtcttg atgaagatga
     7921 aaaagtagct actgttgcaa aagtgccaaa agaagaagat gaagttgagc ttgaggaaga
     7981 aatcgatgaa acattaatca cacaagttcc tgatgaaagt tttgaagatg ctcctggaag
     8041 cgatatagaa gaataaaatc aagctggaga tgactctaat ttgcgaatta gaacgatttt
     8101 ccagcttttt tccagtataa aaagcgcttt ttggctataa tttatgtata atatccttaa
     8161 tacgtcttaa aaagggaaga gttgaacaaa tgcgcaaact gattcaattt ctgtttatag
     8221 cagtagtttt atttttagtg gaatactttt taatcaatca agcagctata ttattcttag
     8281 taacaagtgg acttatccaa ttatgcggat taattattgt gattcggcta ctactctttg
     8341 atcaacggaa tactagctca aaagtcgcct ggattgcggt tattttcatt ttacctgtac
     8401 ttggaacgat tagttacctt gtgtttggta gaaatccagc aactagaaaa ttcagcacag
     8461 ctcaagtaat ggaaaaagct aaattaatta atgcgattca cgcaattcca aacaacacta
     8521 atgaaaaatt accacgacta tctaaaagaa ttgcgcattt aacgtccata gagccaatta
     8581 aggggaataa aatcgaaata ttaacaaatg gcgaagaaac ttttccagtg ctcttagacg
     8641 cgcttagaaa ggctgaaaac cacattcata ttcaatacta tattttcaaa acggatgaaa
     8701 tttctacaga gattcgtgat attttggtag aaaaggcgaa atccggtgtt gaggttaggt
     8761 ttatgtttga tggacttggt tcaagcaaac ttcataaggc atttttagcg cctctaaaag
     8821 aagctggagt tagtattcat gcgtttgatc caatcacatc cccatggatt gtaaggactg
     8881 ccaacttgcg aaatcaccgt aaaattgtcg tgattgatgg tcaaattggc tttacaggcg
     8941 ggcttaatat tggagaagaa tatcgttcta atacaccaga tttccgtgtt tggcgcgata
     9001 cacatattaa aatcacaggc caagctgtta tcgaacttca agaatctttt ctaaatgatt
     9061 gggtctatat ggaaaaccaa gcaggtgctg cagatcaatt tattagtgaa gctggattac
     9121 aacaatattt ttcaccagtt gatgtgggtg acgaatgggc gcaagtgatt tacggcggac
     9181 catatgataa agaaaaatgg gttcgcgatt cgatgcttga tttaattgat tccgctaaag
     9241 aatctgtttg gattgtgtcg ccttactttg ttccagatga ggagtcgctt gcagttattc
     9301 gccgggttgc gatgagcggt gttgacgtgc gagttattat tccaggcaaa ggtgatcgcg
     9361 ggatttcatt ccacggaagt aatgcgtatg tgaaaacaat gattgaagca ggcgcgaaaa
     9421 tgtatgctta tgccgatgat tcttttgttc atgcgaaggc aatgctagtg gacgggacgc
     9481 gtgcagctat aggtactgcc aattttgacg tgcgtagttt tagattgaat catgaattaa
     9541 tggtattctt atatgatgaa agcgaggcta tgcatcattt aaaacgtgat tttgagaaag
     9601 attttgaaga tagccgactg tttacgatga aagatatgga aaacaaacca ttattgactc
     9661 gtataaaaga agttctatct agtttactat caccaatttt ataatttagg agtgggaaaa
     9721 tgagtggaga tttaaaactt agaccgcttg aacgagaaga tttaaaattt gttcaccggt
     9781 taaataatga cgcgaaaata atgtcttatt ggtttgaaga gccatatgag gcgttcgtcg
     9841 agcttcagga gctatatgat aagcacattc acgatcagtc agaacgccgt tttattttag
     9901 aattagatgg ccaaatggtt ggattagttg agttaatgga aattgattat attcacagaa
     9961 gagccgaatt tcaaattatt attgatccta agtttcaggg acacggttac gctgtttctg
    10021 ccacaaaact cgcaatgaaa tatgcttttc acgtactaaa tctgcataaa ctatatttag
    10081 ttgttgataa agtaaatgaa aaagctattc atgtctatga aaaagttggt tttattcgtg
    10141 aaggcgaact aattgatgag tttttcgttg atggaactta tcatgatgct attagaatgt
    10201 gtattttcca acatcaatat caagaaatgg atatttaaaa ggtgattggc gcgggaaaag
    10261 ttgcgccaat cattgttttg ggtcaaaaaa agttctataa taaggtttta gtgaaaaaat
    10321 tatggtatca tgaagtatta aagtttgtac tattttgatg gagaaaggat tggcgtacat
    10381 tggctacagg cattgggaca gctaaaatga tattatgcgg agaacatgca gttgtatacg
    10441 gagaaccggc gatttcagtc ccatttacac aagcaatagt aacgacaaat gtagaaaatt
    10501 ctacaaaaac caaattttct tcggcatttt tttcaggtga tttagatgat atgcctgatt
    10561 tcttagcagg aatcaaagca ttagttgtag atgttttaaa tgagattgga aaaggcgaat
    10621 gcgtttctat ccatgtagtt tcaggtgttc caattggacg aggtttaggt tcaagtgccg
    10681 ctgtagcaac aagtattgcg cgtggcttat ataaatattt taatcaagaa ttagactcga
    10741 aaaaattatt agccattgtg aatgcggcag aaaaaattgc tcatggaaat gctagtggtg
    10801 ttgatgctat cacggttgtg agtgaaaaac cagtatggta tgagcgagat cgaaaactag
    10861 aaattatgca tttttcaaaa aaaatcacgt tcgtagtagc agatactgga gttccaagtg
    10921 aaaccagaga cgcggtgaag gatgttcaag ctttatataa agaaaatcaa acagaaattg
    10981 gtaaaataat tcatcaactc ggcgatattt cccgggaaat aaagactcat ttagaaggcg
    11041 atgcagatac tgtgaaaata ggtgctgcaa tgaataaggc acaatcttat ttagaaactt
    11101 tgacagtaag tgatagtagt ttagagaaat taatagaagt agctagaagt agtggtgcag
    11161 acggggcaaa acttacaggt ggcggtagag gtggatgtat tatcgctgta gcaaaaaatc
    11221 aagaaatcgc tgaacaaata acgaaggagc ttcataatgc tggagctgca caagaatgga
    11281 tttttacgat tggagaaggt agttatgaga gcgacagcca tcgcacacac gaatgtggcg
    11341 ctaattaaat actggggaaa acgcgatgaa cacttgattc tacctgcaaa cagtagttta
    11401 tccttcacgg tagataaatt ttatacaaaa acaacggtag aatgggacga aaacttagcc
    11461 caggatacat ttattctaaa taatgaacaa aaaacggatg caaaagtagc tcgttttata
    11521 gataaaatgc gtgaagaatt cggtatttca gcaaaagcaa aaatcacttc cgaaaatcac
    11581 gttccaactg cggccgggct tgcttcatcg gcttctgcat ttgcagctct tgcacttgct
    11641 ggatctagcg ctgctggcag aaaagacaca aaagaatata tttccagact ggctcgtttc
    11701 gggtctggtt ctgcttctcg ttccgttttc ggagattttg tcatttggga aaaaggcgaa
    11761 ctcgcggacg gtagtgattc atttgcagta cctttcacca acaaattatg tgacaaaatg
    11821 tctcttgtag tcgcagtcgt ttcggataaa gaaaagaaag tttctagtcg ggatggaatg
    11881 cgcctaactg ttgaaacatc accgtttttc gaaaaatggg tttctgctgc tgaaacagac
    11941 ttggaagaaa tgaaacaagc tattttggat gaagatttca tcaaagtggg cgaaatcaca
    12001 gaacgaaacg gaatgaaaat gcatgcgaca acgcttggtg ccgagcctcc atttacttat
    12061 tttcaaccga agtcccttga aataatggat gctgttagag aattacgaga aaatggtata
    12121 ccggcctatt ttacaatgga tgctggtcca aatgttaaag ttatttgtga gcgtgaaaat
    12181 gaaaatatcg tagcagataa gttgtcaggt ttggctaaaa acgttctaat ttgccacgct
    12241 ggtaaggaag cgagtgttgt atcagatgaa aaataaacta caggttaaaa tacccggaaa
    12301 attatatgta gctggtgaat atgcagttgt agaatcaggt catacggcta ttctaactgc
    12361 agttaatcgt tatataacgc taactcttga agatagtgaa cgcaatgaat tatggattcc
    12421 acattatgaa aatccagttt catggccaat tggcggagaa cttaaaccag acggggaaca
    12481 ttggacgttt acagctgaag caattaatat cgcgacaact ttcctgaaat cagaaggaat
    12541 cgagctaacg cctgtgaaaa tggtcattga aacagaatta atcgaccaat ctggcgcaaa
    12601 atatggactc ggttccagtg cagcggctac agttgctgta atcaacgcgc taatgacgaa
    12661 attttatcca gaaatatcaa tgcttaaaaa attcaaactt gctgcacttt cgcatttagt
    12721 agtacaagga aatggctctt gtggcgacat tgcttcttgt atgtatggcg gctggattgc
    12781 gtatacaacg tttgatcaag aatgggtgaa gcatcgtttg gcttataaat cactcgaatg
    12841 gtttatgaaa gagccgtggc caatgcttca aatcgaaaca ttggaagaac cagtgccgac
    12901 tttttctgtc ggttggacgg gcacacctgt aagtaccgga aaactagttt cgcaaattca
    12961 tgcttttaaa caagaagata gcaagaatta ccaacatttt ttaactagaa ataacgagat
    13021 tatgaagcaa ataattcaag ctttccatac gaaagatgag gaattgcttt attcatctat
    13081 taaagaaaat cgtcgcattc ttcaagaact tggaacaaaa gctggcgtaa atattgaaac
    13141 aagcttacta aaagaactag cggactcagc tgaaaacatg ggtggcgcag gaaaatcatc
    13201 tggctctggt ggcggagact gcggaatagc tttctcgaaa acgaaagaac tagccgaaaa
    13261 actcgttaat gagtgggaaa agcttggtat taagcattta cctttccata cagggagagt
    13321 tcaaattact gaataatggg gat
//
LOCUS       DASDYK010000079        13329 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.079, whole genome shotgun sequence.
ACCESSION   DASDYK010000079 DASDYK010000000
VERSION     DASDYK010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13329
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.079"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            120..905
                     /gene="sufC"
                     /locus_tag="U0308_002076"
     CDS             120..905
                     /gene="sufC"
                     /locus_tag="U0308_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HEM2317037.1"
                     /translation="MATLKIQDLHVEIEGKEILKGVNLEISTGEIHAIMGPNGTGKST
                     LSSAIMGHPKYEVTQGTITLDGEDVLEMEVDERARAGLFLAMQYPSEISGVTNAEFIR
                     AAINSRREEGDEIPVMQFIRKLDAKMDILDMDEEMAERYLNEGFSGGEKKRNEILQLL
                     MIEPKLAILDEIDSGLDIDALKVVSKGVNEMRGEGFGCLIITHYQRLLNYITPDFVHV
                     MMQGKVVKEGGPELAKRLEAEGYDWIKQELGIELEEEEAVDQQ"
     gene            924..2225
                     /gene="sufD"
                     /locus_tag="U0308_002077"
     CDS             924..2225
                     /gene="sufD"
                     /locus_tag="U0308_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HEM2317038.1"
                     /translation="MAENMTIKDDFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFV
                     DKTKITRWNFTKFETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQL
                     QQELVDQGVIFTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVP
                     KNVEVKAPIQAVFVQDKAESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEE
                     VIAEKNARITFGGVDNLASDVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLM
                     GDGSSADVKTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIK
                     HGASKSDAQQESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSR
                     GISQKEAERLVIHGFLDPVVRQLPIESVKTMLREVIEGKVR"
     gene            2226..3452
                     /locus_tag="U0308_002078"
     CDS             2226..3452
                     /locus_tag="U0308_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM2317039.1"
                     /translation="MIDIQKIRADFPILAQEINEKPLAYLDNAATSQKPKQVIEALTH
                     YYEFDNANVHRGVHTLAARATDAYESARGKVAKFIHAREVAEIIFTRGTTSAINLVVD
                     SYAEANIEAGDEIVISYLEHHSNLIPWQQLAKRKGAVLKYIELEEDGTISVEQAKKTI
                     GEKTKIVALAHVSNVLGTITPMKEIAAIAHQFGAVILVDGAQAVPHMEVDVVDLDADF
                     YAFSGHKMMAPTGIGALYGKRELLDAMEPTEFGGEMIDFVELYDSTWKELPWKFEAGT
                     PIIGGAIALGAAIDYLAEVGLANIHAHEQALASYAIEEMSKIEGITIYGPKDASKRCG
                     LVTFNLEGAHPHDIATILDEDGIAIRAGHHCAQPLMKWLDVSSTARASFYIYNTKEEI
                     DALIDGLKLTKEYFGL"
     gene            3449..3892
                     /locus_tag="U0308_002079"
     CDS             3449..3892
                     /locus_tag="U0308_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HEM2317040.1"
                     /translation="MTSRKLDQLYRQVIMDHYKNPRNNGELPDSDVTIDLNNPTCGDQ
                     IHLHLKMDGDKIVAAKFTGSGCSISMASASMMTQSIIGKTEKEALKMSREFSEMVQGH
                     DHETIDEYGDVEALAGVAKFPARIKCATLSWKAMERAIFEKEGTK"
     gene            3915..5309
                     /gene="sufB"
                     /locus_tag="U0308_002080"
     CDS             3915..5309
                     /gene="sufB"
                     /locus_tag="U0308_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEM2317041.1"
                     /translation="MTEIPEIGEYQYGFHDKDTSVFRTERGLTEKVVREISNIKEEPE
                     WMLEFRLKSLEQFYKMPMPTWGGDLSELKFEDITYYVKPSEQTVRSWDEVPEEIKRTF
                     DKLGIPEAEQKYLAGASAQYESEVVYHNMKQDLEDLGIVFKDTDSALKENEDIFKEYF
                     AKVIPPSDNKFAALNSAVWSGGSFIYVPPGIKVDTPLQAYFRINSENMGQFERTLIIV
                     DENASVNYVEGCTAPVYTTNSLHSAVVEIIVKPGAYCRYTTIQNWANNVYNLVTKRTF
                     CEENATMEWIDGNIGSKLTMKYPAVHLRGEGARGTTLSIAIAGKGQRQDAGAKMMHYA
                     PNTSSTIVSKSISKQGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNE
                     ILNSNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVE
                     MNRLIKFEMEGSIG"
     gene            5444..5758
                     /locus_tag="U0308_002081"
     CDS             5444..5758
                     /locus_tag="U0308_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317042.1"
                     /translation="MTEIKYLEGMYQDPFFPPFLVDKIKQCIFDTVQFLEQGNHDTEA
                     IQAKFDEMTLAINALQDEFYENESELETGARDSIAETIIPILAHYKIDIDIEELLRER
                     EW"
     gene            5900..6742
                     /locus_tag="U0308_002082"
     CDS             5900..6742
                     /locus_tag="U0308_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEM2317043.1"
                     /translation="MVTIGLTGWSDHDSLLQSKKLTLADYAAHFPVVEVDTSFYAIPS
                     PRTTANWAAQTPDEFRFVIKAFSAMTKHKEWSQYFDSENAMYTAYMDMIAPISETGKL
                     QAILFQFPPYFNCTKENVTYLKYIASKMGDLPVAIEFRNSSWYNEQNTEKTLELLREL
                     GFIHTVVDEPQVGSGSVPIVLRETNSDMTLVRLHGRNQYGWMKANSPEWREVRTLYRY
                     NEEEINEWAKYVEHLQKLSKEVVVIFNNNSGGDAADNAKHLQKALQVEFQGLAPMQMD
                     LFSE"
     gene            complement(6775..7140)
                     /locus_tag="U0308_002083"
     CDS             complement(6775..7140)
                     /locus_tag="U0308_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1634 domain-containing protein"
                     /protein_id="HEM2317044.1"
                     /translation="MAEKKEEMYRVELIVSALLRIGVVLSAIIIVFGLVMLFITGESG
                     YPGETYPTSLTAIFSGLGTLKPYAIMMFGLFCLILTPVLRVVVSLFTFLKEKDYLYVG
                     ITGIVLIILVISFLIGIKA"
     gene            complement(7141..7980)
                     /locus_tag="U0308_002084"
     CDS             complement(7141..7980)
                     /locus_tag="U0308_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEM2317045.1"
                     /translation="MDITQTVEILLISVFAGVVGSLLGLGGGIIVTPALTLIFGIDIQ
                     YAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIATTIGAITGAFVSGLLSATAL
                     YIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNLHDSYYDKSLRQTVDYQVANV
                     PAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSNLMMGVTAAASATV
                     YLFQGDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMILEGL
                     GWI"
     gene            8116..9504
                     /locus_tag="U0308_002085"
     CDS             8116..9504
                     /locus_tag="U0308_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009924752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HEM2317046.1"
                     /translation="MKHLTLWHTNDVHSHLEHWPRIFNFLKEKRTAADKENQSALFFD
                     IGDFLDRVHPLTEGTNGLANTDLLNQLPYDAVTFGNNEGTTLAHEDLDKLYEHAAFPV
                     VCCNFYANKECTKQSDWVKSIVYKEVEQVKIAIIGATAPFREYYEAMGWGVEEPISAI
                     KKQIAGLDANTDVVILLSHLGLPTDERIALELPEIDIILGGHTHHLLENGKIEGNALL
                     AAAGRWGEHVGKVTIELDENNQIISKKAVTFATEKLPIPPNETAEIQAFFDKGREELS
                     EKVVAIPRKLAHNWFDDSEIAHILNEAVCEWTGAETFVMNAGIFMTDFEAGIVTEFDI
                     HQMLPHPLNAIALTMSGEELEILIDGIYRKKAELQDIPLRGFGFRGEYFGTVLMDRAG
                     FDAENQVALFDNKPIDKTREYRIATHDTFVFAPFFPIVKQIKRKEVYTPELLRDILKW
                     KLKKMYGQEEDK"
     gene            9501..9776
                     /locus_tag="U0308_002086"
     CDS             9501..9776
                     /locus_tag="U0308_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YutD family protein"
                     /protein_id="HEM2317047.1"
                     /translation="MTITIQDLNYEIITNYRDAFDEEKLNERFSDILGRYDYIVGDWG
                     YDQLRLKGFFEDDNRKAAYDNKISTLKEYIYEYCNFGCAYFVIKKVK"
     gene            9796..10563
                     /locus_tag="U0308_002087"
     CDS             9796..10563
                     /locus_tag="U0308_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01457 family HAD-type hydrolase"
                     /protein_id="HEM2317048.1"
                     /translation="MKNYKAYLIDLDGTMYRGAEVISEAIIFIENLKRAGIPYLFVTN
                     NSTKTPGQVAEHLTDMGIQAVSEDVFTTSQATVQFMIEQKREKSVYVIGERGIKQELT
                     DNGFEITSSNPAFVVVGLDREVNYEKFSKAALAVRGGAMFISTNGDAAIPTERGLLPG
                     NGSITSVVSVATETAPVFIGKPESIIMEQALAKLGVHKDEAIMVGDNYETDIMAGINY
                     GMDTLIVHTGFTSKEALLTKEIQPTYAVTKLTDWKFN"
     gene            10612..11055
                     /locus_tag="U0308_002088"
     CDS             10612..11055
                     /locus_tag="U0308_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2317049.1"
                     /translation="MVSIQKLTKDNFHETAKLEVHPHQKTFVAENWYSIIEASFEETY
                     HSLVIYAENIPVGYAMYGMDTDDGEFWLVRFMTGKEHQGKGYGGDALEQIIEIVKNLP
                     EKPARLRLSYEPDNTVAEKFYAKYGFEKTGEIIDGEAVADLWFKR"
     gene            11091..12401
                     /locus_tag="U0308_002089"
     CDS             11091..12401
                     /locus_tag="U0308_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEM2317050.1"
                     /translation="MDIFNDFFVIFLIAATAFFVASEFAIVAIRKPTVLQLVASEDPR
                     AKYVKKVTSNMNDYLAACQLGNTLAALAMGWVGEATMRGWLEPLFLMLPVPESVEKPI
                     SIFVSFILITFLNVVLGELAPKTFTIQSTEKVALFIARPLVYWYRLTFPLNWLLNNSA
                     NLITRMFGVKQTVDADQMTPTELKIIFEDSYRQGLLNPQEFRYMKNIFKLGDVPAKEV
                     MIPRMSMIAIDQTATVRDLLKLTSEHTYHIFPVTEDEDKDHIIGMLRVSAVMAGLGKD
                     ETIVTQSIQPFITPVLEVFEGMILEELLVKMQQESEPFVVLTDEYGGTSGIVTLEDVM
                     EVIVGDMEEAKGPKGIRKVALNHYIIEGSEPLLEVEEALGVPIEGPGVHTLSGWMLLE
                     RFDLEAGDEIEHEGYRFIVRSMNKNSIRQVEVKLGKEKPVKLEE"
     gene            complement(12426..12926)
                     /locus_tag="U0308_002090"
     CDS             complement(12426..12926)
                     /locus_tag="U0308_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEM2317051.1"
                     /translation="MVEKQSALESKARSWLIERGVEIDDIAELVLFLQQKYHPGLELD
                     ICRQNVEHVLRKREVQNAVLTGIQLDVMAEKGELVQPLQNIISADEGLYGVDEILALS
                     IVNVYGSIGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASRLAHSY
                     HDDIVN"
     gene            complement(13039..13275)
                     /locus_tag="U0308_002091"
     CDS             complement(13039..13275)
                     /locus_tag="U0308_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEM2317052.1"
                     /translation="MEEISYAEVDKALKKFRPFLVRDGGDYELIEVTQDGVVKIKLLG
                     ACETCPSSDMTLKMGIELTLAEKIIGFKEVVQVF"
BASE COUNT         4305 a         2361 c         3000 g         3663 t
ORIGIN      
        1 ctttattaat agtagaatga aggggagaat gcgaagaata ctggttttta tagttgtaat
       61 cagattagaa ttatactaaa ctaggattat gcaaatttta cactagggag gactttttta
      121 tggcaacttt aaagattcaa gatttacatg ttgaaataga aggaaaagaa attttgaagg
      181 gtgttaacct ggaaatttca actggcgaaa tccacgctat catgggaccg aacggaacag
      241 gtaaatctac gttgtcctca gctattatgg ggcatccaaa atatgaagta acacaaggaa
      301 caatcacgct tgacggggaa gatgtactcg aaatggaagt agacgaacgc gctcgtgctg
      361 gtcttttctt agcgatgcaa tatccaagtg agattagtgg tgttacaaac gctgaattca
      421 ttcgtgcagc aatcaatagc cgccgcgaag aaggcgacga aattccagta atgcaattca
      481 tccgcaaact agatgccaaa atggatattt tagatatgga cgaagaaatg gcggaacgtt
      541 atttaaatga aggattttca ggcggagaga aaaaacgtaa tgaaatcttg caattattaa
      601 tgatcgagcc aaaattagcg attttagatg aaattgactc tggtcttgat attgatgcgc
      661 ttaaagttgt ctctaaaggt gtaaatgaaa tgcgcggcga aggattcggt tgcttaatca
      721 ttacccatta ccaacgttta ctgaactaca tcacgccaga ttttgttcac gtaatgatgc
      781 aaggtaaagt agtaaaagaa ggcggacctg aacttgcgaa acgtttagaa gcagaaggtt
      841 atgactggat taaacaagag cttggtatcg aacttgagga agaagaagca gtagaccaac
      901 aataaggaag tgaggttaaa atcatggcag aaaatatgac gattaaagat gattttatcc
      961 acgctttttc aagtaatgcg aatgaaccgg attggttttt agatatccgt cgcaatgctt
     1021 ttaaagctta cggggaactg gacttgcctt ttgtggataa aacaaaaatt actcgctgga
     1081 atttcacaaa gtttgagacg tttatacctt ttaaagaagg cgtaacgaat gaaactctac
     1141 cggaaaaagt agcgaattta gttgatttag ataataaaga agccaatttt tacgttcaaa
     1201 tggatgaaag acctgcgaga cttcagttgc aacaagaact agttgaccaa ggcgttattt
     1261 tcacagatat tatttcggct gtgaaaaacc atcctgaact tgtgaagaaa tatttcatga
     1321 aagatgcagt tcaagtgaat gaacacaaac tgactgcttt tcatgcggcg cttgtgaacg
     1381 gtgggatttt cctttatgtt cctaaaaatg tcgaagtgaa agcaccaatt caagctgttt
     1441 tcgtacaaga taaagcggaa tctccacttg ttaaccatgt gttgcttgtg gcggatgata
     1501 atagcgcagt cacttatgtg gaaaactacg taacggtaga taacgcacct aaagggattg
     1561 ttagcattgt ggaagaagta atcgctgaga aaaatgcgcg cattactttt ggcggtgtag
     1621 acaatcttgc aagtgatgtt acgacatatg tgaaccgtcg tggacacatt ggaacagata
     1681 gccaaattga atgggcgctt ggcctgatga atgatggcga tactatcaac gagaacgtaa
     1741 caaacctaat gggtgacgga tcttctgctg atgtgaaaac tgtgacagtt ggacgcggga
     1801 agcaaacgca aaacgtgaca acgcgcgtga cacattacgg aaaagcttct aatggtacga
     1861 ttttatccca tggtgttatg aaagaaagag cgacaactat ttttaacgga attggtcaca
     1921 ttaaacatgg cgcttctaag tcagatgcac aacaagaatc acgtgtactg atgcttagtc
     1981 ctgaagcacg cggtgatgcg aacccaattt tattaattga tgaaaatgac gtagtagcag
     2041 ggcatgcggc ttctgttgga cgcgttgatc cactacaatt attctatttg atgagtcgcg
     2101 ggatttctca aaaagaagca gaaagattag ttattcatgg cttcttagac cctgttgttc
     2161 gtcagttacc aatcgaaagt gtgaaaacga tgcttcgtga agtaatcgaa gggaaagtgc
     2221 gctaaatgat tgatatccaa aaaattcggg cggattttcc aattttagct caagaaataa
     2281 atgaaaaacc gctagcttat ttagataatg ctgccacttc acaaaagccg aaacaagtta
     2341 ttgaagcttt aacacattac tatgagtttg ataatgcgaa cgttcaccgc ggtgtgcata
     2401 cacttgcagc aagagcgacg gatgcttatg aatcagctcg aggtaaagta gccaagttta
     2461 ttcatgcgcg tgaagtagca gaaattattt tcacaagagg tactacttca gcgattaatt
     2521 tagttgtaga tagttacgcg gaagcaaata ttgaagcggg cgatgagatt gttatttctt
     2581 atctagagca tcattccaat ttgattccgt ggcaacaact agctaaacgc aagggcgcgg
     2641 ttttgaaata tattgagtta gaagaagatg gaacgatttc tgtggaacaa gcgaaaaaaa
     2701 cgattggtga aaaaacgaaa atcgttgcat tagctcatgt ttctaatgta ctcgggacta
     2761 tcacgccaat gaaagaaatc gcagcaattg ctcatcaatt tggagcagtc attctcgttg
     2821 acggtgcgca agctgtgcct cacatggaag ttgatgtagt tgatttagat gctgactttt
     2881 atgctttttc agggcacaaa atgatggctc ctactggcat tggcgccttg tatggcaaac
     2941 gtgaattgct tgatgcgatg gaacctaccg aatttggcgg agaaatgatt gattttgttg
     3001 aattatatga ttcgacttgg aaagaactgc cgtggaaatt tgaagctgga acaccgatta
     3061 ttggcggagc gattgcgcta ggtgcggcga ttgattactt ggcagaagtc ggactcgcaa
     3121 atattcacgc acatgaacaa gcattagcca gctacgcgat agaagaaatg agcaaaatcg
     3181 aaggcattac catttatgga ccaaaagacg cgagtaaacg atgtggctta gtgactttca
     3241 atttagaagg cgcacaccca cacgatattg cgactatttt ggacgaagac ggaattgcga
     3301 ttcgagctgg tcatcactgt gcgcaaccgt tgatgaagtg gcttgacgtt tcttccacag
     3361 ctcgcgcaag cttttatatt tataatacaa aagaagaaat tgatgcgctt atagatggcc
     3421 tcaagttaac aaaggagtat tttggattat gacaagccgg aaattagatc agctttatag
     3481 acaagtcatt atggatcact ataaaaatcc gcgcaataat ggagagctcc cagatagcga
     3541 tgtaacaatc gacctcaaca acccaacatg cggtgatcaa attcatcttc atttaaaaat
     3601 ggatggtgat aaaatcgttg cggcaaaatt cactggtagc ggctgttcga tttcgatggc
     3661 ctctgcttcg atgatgacgc aaagcattat tgggaaaacc gagaaagagg cactaaaaat
     3721 gtcacgtgaa ttttcagaaa tggtgcaagg tcatgaccat gaaacgattg atgaatacgg
     3781 cgacgttgag gcacttgccg gagttgcgaa attcccagca agaatcaaat gtgcaaccct
     3841 ttcttggaaa gcaatggaga gagcgatttt tgaaaaagaa ggaacaaaat aagtagcgaa
     3901 aaggaggata cgacatgact gaaattccag aaattggcga ataccaatat ggattccatg
     3961 acaaagatac ctctgtgttc cgtacagaac gcggattaac agaaaaagta gtaagagaaa
     4021 tttcgaatat taaagaagaa ccagaatgga tgcttgaatt ccgtttgaag tctttggagc
     4081 aattttataa aatgccaatg ccgacttggg gtggcgacct gtcagaactg aagtttgaag
     4141 acatcactta ctacgtgaaa ccgtctgaac aaacagtgcg ctcttgggat gaagttcctg
     4201 aagaaattaa acgtactttt gataaattag gtattcctga agccgaacaa aaatatttgg
     4261 ctggggcatc tgcgcagtat gaatccgaag tagtttatca caatatgaag caagacctag
     4321 aagatttagg gattgtcttc aaagatacag attccgcgtt aaaagaaaac gaagatattt
     4381 tcaaagaata tttcgcaaaa gtaattccac caagcgacaa caaattcgct gcgctaaact
     4441 cggctgtttg gtcaggtggc tcattcatct acgtaccacc aggtatcaaa gtagatacgc
     4501 cacttcaagc ctatttccgc attaactcgg aaaacatggg tcaatttgag cggacactaa
     4561 ttattgtgga cgaaaatgcc agcgtaaact acgtagaagg ctgtactgct cccgtttata
     4621 ctacgaattc ccttcactct gctgtcgtgg aaatcattgt aaaaccaggc gcttactgtc
     4681 gttacacaac catccaaaac tgggcaaata acgtttacaa cctagtaacg aaacgtactt
     4741 tctgtgaaga aaatgcgaca atggaatgga ttgatggcaa cattggttcg aaattaacaa
     4801 tgaaataccc agctgtacat ttacgaggcg aaggagcacg tggaacgacc ctttctatcg
     4861 cgattgctgg taaaggccaa cgtcaagacg ctggagcaaa aatgatgcac tatgcgccga
     4921 atacgtcctc tacgattgtg tcgaagtcga tctcgaaaca aggcggaaac gtaacgtatc
     4981 gcggaattgt tcattttggt cgtaatgcag acggtgcacg ttcgaatatc gaatgtgata
     5041 cgctgattat ggataacctg tccacatcgg acacaatccc gtacaacgaa atcctaaaca
     5101 gtaacatttc attagaacat gaagccaaag tttccaaagt atccgaggaa caacttttct
     5161 atctaatgag ccgtggttta agcgaagaag aagcgacaga aatgatcgtt atgggcttca
     5221 ttgaaccatt tacgaaagaa ttaccaatgg aatatgccgt tgagatgaac cgtttgatta
     5281 agtttgaaat ggaaggctcg attggttaaa taaagcaaaa gacgaacttt ttagttcgtc
     5341 tttttttgat gaaatccaaa aatagcaggg aataaatctg gcttgtattt ttataaatga
     5401 agtgatatat tggttccaac aatttagcaa aggactgata attatgacag aaattaaata
     5461 tttagaggga atgtatcaag atccattctt tccaccgttt ctagtagata aaattaagca
     5521 atgtattttc gatacggttc aatttttaga acaagggaat catgatacag aagcgattca
     5581 agctaaattt gatgaaatga cattagcaat taatgcattg caagatgagt tttatgaaaa
     5641 tgagagcgaa ttagaaacag gagcaaggga ttccattgct gaaacaatca tcccgatttt
     5701 agctcattat aagatagata tcgatattga agaattactt agagagcgcg agtggtaata
     5761 tatgataaag acttcaactg ctagacagtt gaagtttttg ttttgtttcg aagtaaaaac
     5821 gaggaccaaa ttaaaggctt ctccctcctt tttgcgttat aataaacata aatcataacg
     5881 atagagaggg tggcagttga tggtaacaat cgggttaact gggtggagtg atcatgattc
     5941 tttattacaa tcaaaaaaat taacattggc tgattatgcg gcacattttc ctgtggtgga
     6001 ggttgatacg agtttttatg cgattccttc tccgcgaaca acggcaaact gggcggcgca
     6061 aactccggat gaatttcgtt ttgtgattaa agcattttcg gcgatgacga aacataagga
     6121 atggtcgcag tattttgata gtgaaaatgc gatgtatacg gcttatatgg atatgattgc
     6181 gccgataagt gaaacgggaa aactacaggc aattttattt caatttccgc cgtattttaa
     6241 ttgtacgaaa gaaaatgtga cttatttaaa atatattgct tcgaaaatgg gtgatttacc
     6301 ggtggcgatt gaatttcgca atagttcttg gtataacgag caaaataccg aaaagacgct
     6361 ggagttgctg cgagaattag gttttattca tacggtcgtt gatgaaccgc aagttggttc
     6421 tgggagcgtg ccgattgtgc tgcgtgagac gaatagcgat atgacattag tgcggcttca
     6481 cggccggaat cagtatggtt ggatgaaagc taacagtccc gagtggcgcg aggttcgcac
     6541 gctataccgt tacaatgaag aggaaattaa cgaatgggca aaatatgtgg aacatttaca
     6601 aaaattgtcc aaagaagttg tcgtgatttt taataataac agcggcgggg atgcggctga
     6661 taatgcgaaa catttacaaa aggcgttaca agttgagttt caaggcttgg ctccgatgca
     6721 aatggatttg ttttcagaat aaaaaaagat ggcgcatcgc tagcgccatc ttttttatgc
     6781 ttttatacca attaaaaagc taataactaa aataattaat acaatcccag ttatcccaac
     6841 gtacaaataa tctttttctt tcaaaaaagt aaataacgat acaacgacac gaaggacggg
     6901 cgttaaaatt aagcaaaaga ggccaaacat cataatcgcg tatggtttaa gcgtccctag
     6961 cccgctgaaa atcgccgtaa gcgaggttgg ataagtttcc ccaggatagc cactttcgcc
     7021 ggtgataaat agcataacaa gaccgaaaac aataataatc gcactgagga caacaccgat
     7081 tcgtagcagt gcgctaacaa ttagctccac gcggtacatt tcttcttttt tctctgccat
     7141 ttaaatccac cccaatcctt ctaaaatcat ttggaaggca acatataaaa tgacgggaat
     7201 aaaaataatc cgaataactt tgctttttaa acgttgcata atgcgcgttc caagtgttgc
     7261 accgacaagt acgccaatcg caactggagc tgcaatagcg ggctggatgt cgccttggaa
     7321 aaggtacacg gttgcactgg cagccgcagt tacgcccatc attaaattac tcgttgcgct
     7381 acttactttt agtggcattt tcataaagac atcaagtgcc atgactttaa atgcgccact
     7441 accgattcca agtaagccac tagcaatacc tgcgccgtac atcacaccaa aaccagcagg
     7501 aacatttgcc acttgatagt caactgtttg ccgtaaagat ttatcgtaat aagaatcatg
     7561 taagtttagt ttggttgcga gtgggtctgg tttcacattg gtaggaaatt ctgtaccgac
     7621 ctttttaatc atgttgaaag cagaataaag aagtaaaagt ccgaagatga tgtagagtgc
     7681 cgtggccgag agcagtccgc tgacgaaagc cccagtgatt gcaccaattg ttgtggcaat
     7741 ttcgagaaac atcccgacac gaagattggt gatgccgtct ttgatataag cgatggcaga
     7801 accactactt gttgcgatga cggaaataat actcgcacca atcgcatact gaatatcaat
     7861 cccgaaaata agagtcaagg caggcgtcac gataattccg ccaccaagcc cgagcaaaga
     7921 gcctactacc cctgcaaaaa cagagattag aagaatttcg actgtttgcg taatatccaa
     7981 aaaaatcact tccctttaaa acaatatatc ctatcataac ataaaatgaa aagggaacaa
     8041 ttcatccagt cctagtgcgt gtaaaaaaag ctgttttacg ctacaatagt tataagtagg
     8101 gagtgagatg gatagatgaa acatttaact ttatggcata caaatgatgt tcatagtcac
     8161 ttggaacatt ggccacgcat ttttaatttc ttaaaagaga aaagaactgc tgcagataaa
     8221 gaaaatcagt cggcgctctt ttttgatatt ggtgattttt tggaccgggt ccatccgctt
     8281 actgaaggaa cgaacgggct tgcgaatacg gacttactta accaactgcc gtatgatgcg
     8341 gtgacttttg gtaataatga aggaacgact ttggcccatg aagacttgga taaattatat
     8401 gaacatgcgg ccttcccagt agtttgctgt aatttttatg cgaataaaga gtgtacaaag
     8461 cagtcggact gggtgaaatc gattgtttat aaagaagtag aacaagtgaa aattgctatt
     8521 atcggtgcaa cggcgccgtt tcgggaatat tacgaggcaa tgggctgggg agtagaagaa
     8581 ccaattagcg cgattaaaaa gcaaattgct ggcttagacg cgaatacaga tgtagttatt
     8641 ttactgagtc accttggctt gccgacagat gaaagaattg ctttagaatt accagaaatt
     8701 gatattatat taggtgggca tacccatcat ttacttgaaa atggaaaaat agaaggaaat
     8761 gcattactgg ctgctgccgg aagatggggc gagcatgtag ggaaagttac tatcgagcta
     8821 gatgaaaata atcagattat ctctaaaaaa gcagtaactt tcgcaaccga aaaacttcca
     8881 atcccaccaa atgaaacggc agaaattcaa gctttcttcg ataaaggacg ggaggaactc
     8941 tctgaaaaag tagttgcgat tcccagaaag ttagcgcata attggtttga tgactcggaa
     9001 attgcgcaca ttttgaatga agcggtttgt gaatggactg gggcagaaac atttgtgatg
     9061 aacgcaggca tttttatgac agactttgaa gcagggattg tgacggaatt tgatatccac
     9121 caaatgttac ctcatccgct caacgcgatt gctttaacga tgtctggtga ggagcttgaa
     9181 atacttattg acggaatcta ccgaaagaaa gctgaactgc aagatattcc gcttcgaggt
     9241 tttggtttcc gaggcgagta ttttggcacc gttttgatgg acagagctgg ttttgatgcg
     9301 gaaaatcaag tggcactttt tgataataaa ccgattgata aaacgcggga ataccggatt
     9361 gcgacgcatg atacgtttgt gttcgcacca tttttcccga tagtaaagca aattaaacga
     9421 aaagaagtat atacaccgga gttactccga gatattttaa aatggaaact taaaaaaatg
     9481 tacggacagg aggaagacaa gtgacgatta cgattcaaga tttaaactac gagattatca
     9541 ccaattatcg cgatgctttt gacgaggaga agttaaatga acggtttagc gatattcttg
     9601 ggcgatatga ttatatagta ggcgactggg gttacgatca actccgtctc aaaggctttt
     9661 ttgaagacga taaccgcaaa gccgcatacg acaacaaaat tagcacgtta aaagaatata
     9721 tttacgaata ctgcaatttt ggttgtgcgt attttgttat taaaaaagta aaatagtaaa
     9781 agaggtaatt aggaattgaa gaattataaa gcgtatttaa ttgatttaga tggcacgatg
     9841 tatcgcgggg cagaagttat ttctgaggcg atcattttta tcgaaaactt aaaacgtgcg
     9901 ggaattccgt atttatttgt aacaaacaat tcaacaaaaa cacctgggca agtagcagaa
     9961 catttaactg acatggggat tcaagctgta agtgaggatg ttttcacgac gtcacaagca
    10021 accgtgcaat ttatgataga acaaaaacgc gaaaaatcgg tttatgttat cggtgaacgt
    10081 ggaataaaac aagaactaac agataatgga tttgaaataa cttctagtaa tccagctttt
    10141 gttgtcgttg ggcttgaccg ggaagtcaat tatgagaaat tttcaaaagc agcgcttgcg
    10201 gttcgcggtg gagcgatgtt tatttcgacg aatggcgatg cggcaattcc gacagagcgt
    10261 ggtttgcttc cgggaaatgg ttccatcaca tctgtcgttt ctgtagccac agaaacagcg
    10321 ccagttttta ttgggaagcc tgaatccatt attatggagc aagcactcgc aaaactcggt
    10381 gtccataaag acgaggcaat catggtgggt gacaactacg aaaccgatat tatggcgggc
    10441 atcaattatg gcatggatac gttaatcgta cacactggct ttacatcaaa agaagcatta
    10501 ttaacgaaag aaatccaacc tacatacgct gtaaccaaac taactgattg gaaatttaac
    10561 tagaagagcg gaatttttct gctctttttt taataaatag gaggttagaa aatggtctca
    10621 attcaaaagt taacgaaaga caattttcac gaaacagcaa aattagaagt gcatccacac
    10681 caaaaaacat ttgtcgcaga aaactggtat tccattatcg aagcaagttt tgaagaaacg
    10741 tatcattcgc ttgtaatata cgcggaaaat ataccggttg gctacgcaat gtatggaatg
    10801 gatacagatg atggtgagtt ttggttggta cgatttatga ctgggaaaga gcatcaaggt
    10861 aagggctacg gcggagatgc gctagaacaa attatcgaga tagtgaaaaa tctaccagaa
    10921 aaaccagcac gtctgcgtct atcttacgaa ccagataata cggtagcaga gaaattttat
    10981 gcaaaatatg gatttgaaaa aacgggggag atcatcgacg gcgaggcagt ggccgacttg
    11041 tggttcaaac gttaaaatcg ggtatagaat ggggataagg aggatgctaa atggacattt
    11101 ttaatgattt ctttgtgata tttttaattg cagcgaccgc ctttttcgtg gcaagtgaat
    11161 ttgccattgt cgcaatccgg aaacctactg tcctgcaact agtagcctca gaggacccgc
    11221 gagcgaaata tgtaaaaaaa gttacttcga atatgaatga ttatttggct gcctgtcagt
    11281 taggtaatac acttgccgca cttgctatgg ggtgggttgg tgaagcaaca atgcgtggct
    11341 ggttggagcc gttattttta atgttacctg taccagaatc cgttgaaaag ccgatttcga
    11401 tttttgtttc gtttatttta attacattct taaatgtggt actcggggaa cttgctccga
    11461 aaacatttac aattcaaagc acagaaaaag tagctctgtt tatcgcgcgc ccgcttgtgt
    11521 attggtatcg cctgactttt ccactcaatt ggcttttaaa taactcggcg aatttaatca
    11581 cgcggatgtt tggggtaaaa caaacagttg atgcggacca aatgacaccg accgaactga
    11641 agattatttt tgaagatagc tataggcaag gacttttgaa tccacaagag tttcgttata
    11701 tgaaaaatat tttcaaactc ggggacgtgc cagcgaaaga agtaatgata ccgcgaatgt
    11761 caatgattgc gattgaccaa acggcgaccg taagagattt actgaaatta acttctgaac
    11821 atacatatca tatttttcca gttacggaag atgaagataa agatcatatt atcggaatgc
    11881 tacgagtcag tgcggttatg gctggacttg gaaaagatga aacgattgtg acgcaatcta
    11941 ttcaaccatt tattacacct gttttagaag tgtttgaagg catgattttg gaagagttac
    12001 ttgtgaaaat gcagcaagaa agtgagccgt ttgtcgttct cacggatgaa tacggcggga
    12061 cttcggggat tgtgacgcta gaagatgtca tggaagtaat tgttggtgat atggaagaag
    12121 caaaaggtcc gaaagggatt cgaaaagtag ctttgaatca ttatattatt gaaggatctg
    12181 agccgcttct tgaagtcgag gaagcactgg gggtcccaat tgaagggccg ggtgttcata
    12241 cgttatcggg atggatgttg ctcgaacgtt ttgacttaga agctggtgat gagattgaac
    12301 atgagggata ccgctttatc gttcgttcaa tgaataaaaa ctcgattcgg caagtagaag
    12361 taaaattagg gaaagaaaaa ccagtaaaat tggaggaata agcctcttgt tttactggtt
    12421 tttgtttaat taacgatgtc gtcgtgataa ctatgcgcaa gccgacttgc agcggccgca
    12481 gcgatagcgc caacaatatc atcgagaaat gtgtgaacgg cgataccatc gtgttcattt
    12541 aattttgcaa gaatacctgg ttttacttta tcgatataac cgtaattggt aaatccaata
    12601 gatccgtaca cattgacgat ggagagcgca agtatctcgt cgacgccgta cagcccctca
    12661 tcagcgctaa tgatattttg tagtggttgg acgagttctc ctttttcagc catcacatca
    12721 agctgtatgc ctgttaaaac tgcattttga acttcacgct tgcgaagaac atgctccaca
    12781 ttttgacggc aaatatctaa ttccaatccg ggatgatatt tttgttgtaa aaataataca
    12841 agttctgcga tatcatcaat ttctacgccc cgttcgatga gccaactgcg tgcttttgat
    12901 tctaaggcac tttgtttttc taccattttt tcttacctcc ttctaactgt atgtatattg
    12961 tatgatagac gtttacagga tttctaaacc tttttataca aaaatagcga ccgattgttt
    13021 ggtcgctaaa atatttgttt aaaaaacctg aacaacttct ttaaagccaa taattttttc
    13081 tgctaaagtt aattcgatac ccatttttaa agtcatatca gaactggggc aagtctcgca
    13141 tgcaccaagt agtttaattt ttacgacacc gtcttgtgtg acttcgataa gttcatagtc
    13201 cccgccatca cgaactaaaa acggacggaa cttttttaaa gctttatcaa cttcggcgta
    13261 gctaatttct tccataggat atagttctcc tttcgtgagg cattgttata ttttctatta
    13321 taacaggat
//
LOCUS       DASDYK010000080        13052 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.080, whole genome shotgun sequence.
ACCESSION   DASDYK010000080 DASDYK010000000
VERSION     DASDYK010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13052)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13052)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13052
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.080"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            97..2571
                     /locus_tag="U0308_002092"
     CDS             97..2571
                     /locus_tag="U0308_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapB repeat-containing protein"
                     /protein_id="HEM2317053.1"
                     /translation="MKKILHIVIALSVICSIILVPVDWSAKAGGNNKRDDLIKSVSFY
                     NSNGQNVTAKENYNEKLNYFLEVAFGGNSFQKGDYFNITLSSDALLYTEKAYDLKVDI
                     DPTAVTNEQVVGKVTVEKINGSPTLHFVFTEDSESFFINSFDASFKIQVMPAHGDKNV
                     INLSYSGAAKNFKNIGTSSVEWNVNMADDWPPVGISDFSKISGDLYHAILVYEKPSSK
                     VNYETEILVSYPLFEKRIPLGNVQNIKIEVWDEAKEIYRVGVAGVDYGTITYDVGTPF
                     VGGPIFQMNCTIPFKGISTKTRVSFDIDTNVDGKPGTTDPYLVSLSSLSSATKSLEFY
                     PVNNAVTQMTATFFGKVTTRFEDELGNPVTFDNYSTVTTPGKVNQDGKFEIAEPFLHN
                     SVQNVDKHAYDTLLDTNKYKLLEVTSPNKLSETADNLSIQIKRGYQNDVLYKIKALQK
                     PVISALPEIEYSKTVNRTMEEFLEDVEAKTDIPADIDCDLTNVKWGVPGDYLVLITAV
                     NEDNQAADPVPVTIKISKNPAPVITVDPEIIYDKTVTKEESTLLNEVNARTNDGSTIT
                     SNINDKVKWGVPGDYEVTLNAVNEDGVAAESKTFIVRILKSPAPIITVDPEITYPKTI
                     TKTEAELLQEVNAQTNDGSPLVSDMNDKVKWGVPGDYEVTLNAINEDGVAAEAKTFIV
                     RILKSSAPIITVDPEITYDSSVIKDERELLKDVHARSSDGSVLTSDSQVKVKWKKTGS
                     YTVTLNAVNEDGISANSVQFTVHIVDAKAIPVVIEEKPESTPKPDTKEKVVIKKEKLP
                     KTGDTNTKTILSGIFCLGAWYLLRRK"
     gene            2770..3423
                     /locus_tag="U0308_002093"
     CDS             2770..3423
                     /locus_tag="U0308_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2317054.1"
                     /translation="MDDWSTLIGELEHNTPEKVWIVREELNISEVFEIQKLEAHFILV
                     LEGVLRMENEHQQILHYFRENNVIYQSPYELRVQNKLRLVAETPAHIVLLHREFFLNY
                     ATNQPAYSEKLVRAIMDNAASFMFELMKNDLKSEDRLAYSLQQLCQSLELEVKNEFYL
                     LPHYINKNKLALYSDISRKSLYKYLQNLERKGQIKMNGNQILVRISRFTNSENVDWL"
     gene            3612..5228
                     /locus_tag="U0308_002094"
     CDS             3612..5228
                     /locus_tag="U0308_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2317055.1"
                     /translation="MKLGKVGALLLGTALVFQAPFQVFATSVNGEEQVKKEAAAPKIS
                     VNKQTLAATSDLEQTVGEAITKTIHLQDQALPNNEWGSYISDVKVTLSNMDGISYDVK
                     YGPLSEDGTHYQYADITLSGAPTKAGTGSISLEYYDGAGNGGVYSYSVNTKSKTTIQY
                     VDGDGNKLAEDTVKTGDLNTAYTSEPKTIDGYEVDETKLPSNQNGQFAETNQTVTYIY
                     SKTKSEVNKGTVGISFYTPDGSRRELKSSLDLSYAYPDGVPTDTVTFGDLAKNTTYKD
                     LRNTPDAPTLLWNDLLHYMVDYMNGDIDAAQFEEAVGLTPANFDLDFISRNFEGYKFD
                     EAMYQENLSKLVTFEQDGDQVDLQVPFKKVEVGADITVKYVDTAGNELASVETLSGDV
                     DDNYTSEAKTIDGWTLKETPNNATGVFSKEAQTVTYVYEKNEDTDVTPAPDNSADTND
                     DSNSSDNTATTDDNSSSAVKEKAQTQASSPKAGKVTTQESTSNKVTAQSKESLPKTGD
                     NVLESSLLVGLGMLLLGGLFVFLRKTRKVK"
     gene            complement(5314..5622)
                     /locus_tag="U0308_002095"
     CDS             complement(5314..5622)
                     /locus_tag="U0308_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEM2317056.1"
                     /translation="MKVSKSFEAFAKEAPEVHSAWMETVHKLDAASKLDKKTEELAYI
                     AVMAATRLESGLPFHVKMAKTNGATRDEIISAVLVGLPAVGNTVISALPVALEAYDEV
                     "
     gene            complement(5685..6500)
                     /gene="pdxK"
                     /locus_tag="U0308_002096"
     CDS             complement(5685..6500)
                     /gene="pdxK"
                     /locus_tag="U0308_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine/pyridoxal/pyridoxamine kinase"
                     /protein_id="HEM2317057.1"
                     /translation="MTIKKTLTIAGSDSSGGAGLQADLKTFEEYGTYGFSAITTIVTM
                     DPDNNWAHGVTPIDAQLVREQLKTILSGGPVDAMKTGMLGSIDIIKATREAIDKYDLK
                     NVVIDPVMVCKGEDELIQPENAEAIRDLLLPKATITTPNLFEAGQLSGLGKLTTLDDM
                     KKAAKKIIELGAKYVVIKGGKALESDKAIDLLYDGKEFTIYEVEKISPSHNHGAGCTF
                     AAAITAGLAKGLTVEEAVAKAKDFVTAAIKGGFALNEFIGPVWHGAYNKAENR"
     gene            complement(6525..7391)
                     /locus_tag="U0308_002097"
     CDS             complement(6525..7391)
                     /locus_tag="U0308_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2317058.1"
                     /translation="MIKVIASDMDGTLLNSDIEIAQENVEAIEKARAKGIHFVLCTGR
                     MYDDAMGLINKANLYAPAICMNGAEIRDEHGKIILQHPIDRNLARNTYNTLTELGMYT
                     EFFTDMGPITTDKARGKEFMIEMHKRIHPDVPAETIMDKVEERFESKDVHEIPDVERI
                     LGNKDLTILKFISFSSDKDILAKAKQKLEKDSELSVTSSFSDNIEITHREAQKGISLQ
                     YYVEKLGVTLDETFAIGDNMNDISMLKMAGYSVAMGNGEEEVKDLAEHVTLSNDEHGV
                     AAAIYKMLETND"
     gene            7565..8128
                     /locus_tag="U0308_002098"
     CDS             7565..8128
                     /locus_tag="U0308_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose O-acetyltransferase"
                     /protein_id="HEM2317059.1"
                     /translation="MKTELEKMIAGEMYDPSDRELAHGRNRARKFCREINDAMDSESR
                     ASVLKRLFGGTKENVYVEPDFRVDYGSNIYVGENFYANFDCVILDVCEVHIGDNCMMA
                     PGVHIYTATHPLDPVERNSGLELGKPVEIGDNVWIGGRAIINPGVKLGNNVVVASGAV
                     VTKSFPDNVVLAGNPARVIKTIEVEEK"
     gene            8125..8388
                     /locus_tag="U0308_002099"
     CDS             8125..8388
                     /locus_tag="U0308_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5327 family protein"
                     /protein_id="HEM2317060.1"
                     /translation="MIIADSKIFEQMENELAKAKAATTKASQDKHLHGLMLLVQLAKT
                     GDETTAAVEPIAIQSAEPAQIASMDGKKIELEDGANGDSLLDF"
     gene            8398..8775
                     /locus_tag="U0308_002100"
     CDS             8398..8775
                     /locus_tag="U0308_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HEM2317061.1"
                     /translation="MKKTIITGAIFAGLAVLLGAFGAHALKDVLGSYASTWETGVQYQ
                     MFHAGGILVVGLLMEKQASRLYTWAAILFSVGIVFFSGSLYVLSISKVSILGAITPIG
                     GVCFVVGWFLLILGVSRRTMSRY"
     gene            8889..9824
                     /locus_tag="U0308_002101"
     CDS             8889..9824
                     /locus_tag="U0308_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317062.1"
                     /translation="MTYALEIKGLRKIYSTGVEALRGVDLTVEEGDFYALLGPNGAGK
                     STTIGIITSLVNKTSGQVSVFGYDLDTDIVRAKQQIGLVPQEFNFNPFETVQQIVVNQ
                     AGYYGVSRKEAIKRSEKYLKQSNLWEKRNERARMLSGGMKRRLMIARALMHEPKLLIL
                     DEPTAGVDIELRREMWTFLRELNESGTTIILTTHYLEEAEMLCRNIGIIQSGELIENT
                     SMKSLLSKLQFETFIFDLEPYEEAFEITGYNHVFEDKQTLSVEVERNQGVNHIFEQLS
                     EHGIKVLSMRNKSNRLEELFLKITEEKHQVGEKHV"
     gene            9817..10587
                     /locus_tag="U0308_002102"
     CDS             9817..10587
                     /locus_tag="U0308_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317063.1"
                     /translation="MFNLYFTALKSLAAKETNRYMRIWVQTLVPPVITTSLYFIIFGK
                     MIGSRIGEMNGFSYMEYIVPGLIMMSVITSSYANVSSSFFSQKFQKNIEEILVAPVPT
                     HIIIWGFLIGGIGRSVLVGALVTLISMVFVPIHIHSWTIGIITFLMTAILFSLAGLIN
                     GIFARSFDDVSIVPTFVLQPLTYLGGVFYAISMLPPIWQAISKVNPIVYMISGFRYGF
                     LGVTDVPVAISLSILVVFSAVLYSICWYLISKGRGLRS"
     gene            10847..11731
                     /locus_tag="U0308_002103"
     CDS             10847..11731
                     /locus_tag="U0308_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2317064.1"
                     /translation="MMNKENPLNKYHTGKFEKQRQDYPGLQSKMTPVPDTGESSYQGA
                     NKLTGKKAFVTGGDSGIGRAAVIAYAREGADVAINYHPDEEVDAQEVKAIVEEAGQKC
                     VLLPGDLRKEGLAKDLVKKAYNELGGLDILVLNAGLQQYQLDIQKLPAEQLRDTFEVN
                     VFSVVFAIQEALNYLKAGASIILTSSIQGVKPSAHLVDYAMTKSSLISLTKSLAAQLG
                     EKGIRINAVAPGPIWTALQISGGQPQDSIPAFGQDQPLGRAGQPAELASAYVLLASDE
                     ASYTTGQVYGITGGAPIN"
     gene            11749..11925
                     /locus_tag="U0308_002104"
     CDS             11749..11925
                     /locus_tag="U0308_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2188 domain-containing protein"
                     /protein_id="HEM2317065.1"
                     /translation="MPWTKNDYPDSWKNLRKTEREKAIEIGNALLKDGYSESRAIPIA
                     TSKAEEWYKNHKES"
     gene            12050..12658
                     /locus_tag="U0308_002105"
     CDS             12050..12658
                     /locus_tag="U0308_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317066.1"
                     /translation="MNKRRWIFSTVVAAFLLIIGGFLVYQQMTPKPFTEVVAEAKIDG
                     YESGDELENASTVIVTGQLEKRGDSIIERASDDAVIGVYRMSTFKIAQVLKNETDDNL
                     AKEMTISVYENEGYDAKANTTYHIAGYTKMEKEEKYLLLLQKDSEDDYYVPTAVIFGK
                     INLNPNKRNELFPKNSDTESAINKVQAEVLKNLENEIERENK"
BASE COUNT         4248 a         2168 c         2798 g         3838 t
ORIGIN      
        1 gtagatataa tggtttttag ttaggtgcag agatacgcaa gaaaacacag gagggcttgg
       61 gacaggtcaa accatactac aaaggaggag atgtaattga agaagatttt acatattgtt
      121 atcgcactta gtgtaatttg ttcgataatt ttagtgccag tagattggtc cgcaaaagca
      181 ggcggtaata ataagcgaga tgatcttatt aaatctgtca gtttttataa ttcaaatgga
      241 caaaatgtaa cggcgaagga aaactataat gaaaaactaa attatttttt agaagtagct
      301 tttggaggga attctttcca aaaaggggac tattttaata ttactttatc atctgatgcc
      361 ttactctata cagagaaagc ctatgatttg aaagtggata ttgacccaac agcggtaact
      421 aatgaacaag tagttggtaa agttactgta gaaaaaatta atggatcacc aacattgcac
      481 tttgttttta cagaagattc agagtctttt tttataaaca gctttgatgc gagttttaaa
      541 atacaggtga tgccagcgca tggcgataaa aacgttatta atctttccta tagtggcgct
      601 gcaaaaaact ttaaaaacat tgggacgagc agtgtggaat ggaacgtaaa tatggcagat
      661 gactggccgc cagttggaat tagcgatttt tctaaaataa gtggcgattt ataccatgcg
      721 attttagtgt atgaaaagcc gagtagtaaa gtgaattacg aaacagaaat tttggtatcg
      781 tatccgcttt ttgaaaaacg aattccactt ggaaatgtgc aaaatattaa aattgaagtt
      841 tgggatgaag cgaaggagat ttatagagtt ggtgtagccg gggtggatta cggaacgatt
      901 acatacgatg ttggaactcc atttgtaggc ggtcctattt tccaaatgaa ttgtactatt
      961 ccgttcaaag ggatttctac taaaactcgt gttagttttg atattgatac gaatgtggac
     1021 gggaaacctg gaacaacaga tccgtactta gttagtcttt cttccttatc atcagctaca
     1081 aagtcgctgg aattctatcc agtgaataat gctgttacgc aaatgacagc tacctttttt
     1141 gggaaagtaa cgacgcgctt tgaggatgag ttaggcaatc cagttacttt tgataattat
     1201 agtactgtaa caacaccagg gaaagtcaat caagatggta aatttgaaat agcggaacct
     1261 tttttacaca attccgtcca aaacgtggat aaacacgcct atgataccct tttggatact
     1321 aataaatata aattattaga ggtaacttct cctaataaac tatctgaaac agcggataat
     1381 ttaagtattc aaataaagcg tggttatcag aatgatgttt tatacaaaat aaaagctctc
     1441 caaaaacctg tcattagcgc gcttcctgaa atcgaatata gtaaaacagt gaataggacc
     1501 atggaagagt ttttggaaga tgtggaagca aaaacagata ttccagctga tatagactgt
     1561 gatttaacga atgtgaaatg gggtgttccg ggggattacc tagttcttat aaccgcggtg
     1621 aatgaggata atcaagcagc ggatcctgtt cctgtaacga ttaaaatttc caaaaatccc
     1681 gcaccagtca taacggtaga cccggaaata atctacgata aaacagtgac gaaagaggag
     1741 agcacattac taaatgaagt aaatgcgcga acaaatgacg gttcgacgat aacttctaac
     1801 attaacgaca aagtaaaatg gggcgtgcca ggcgattacg aggttacttt gaacgcggta
     1861 aatgaagacg gcgtggcagc ggaatcgaaa acatttatcg tccgcatttt aaaaagccca
     1921 gcaccaataa tcacggtaga tcctgaaata acctatccga aaacaataac taaaacggaa
     1981 gctgaactcc ttcaagaagt aaatgcgcaa acaaatgatg gttcaccgct tgtttctgat
     2041 atgaatgaca aagtaaaatg gggcgtgcca ggcgattatg aagttacgtt aaacgcgata
     2101 aatgaagacg gcgtagcagc ggaagcgaaa acatttatcg tccgcatttt aaaaagttca
     2161 gcaccaataa tcacggtaga tcctgaaata acctatgatt cttctgtaat taaagacgaa
     2221 agagagctat taaaagatgt ccatgctcgt tcaagtgacg gttcggtatt aacttctgat
     2281 agtcaggtaa aagtaaaatg gaaaaaaaca ggaagctata ccgttacttt aaatgcagta
     2341 aatgaagatg gcatttctgc taattctgtg caattcactg tgcatatagt agacgctaaa
     2401 gcaataccag tagtaattga agaaaagcct gaatccactc caaaaccaga tactaaagaa
     2461 aaagtagtta ttaagaaaga aaaactacca aaaacaggag atacgaatac aaaaactata
     2521 ttgagtggga ttttttgttt aggcgcttgg tatttgctta gaagaaaata gacaaaaacc
     2581 gcaagtgaag tcacttgcgg tttttttgcc gattgtagct taaaactgct agagtagata
     2641 taaattgcca atttgaatca ttcgcattct agggcttatt tttagaaacg attttttcat
     2701 ggataaaagg gtatagtaac aaaataggaa cgcggttagg aaaacataaa cttgatggtg
     2761 gtgaaacaaa tggacgactg gtcaactttg ataggcgagc tagaacataa taccccagaa
     2821 aaagtttgga ttgttagaga agaactaaac atatcggaag tatttgaaat acaaaaatta
     2881 gaggcgcatt ttattttagt tttagaaggt gtcttgcgta tggaaaatga acatcaacaa
     2941 attctgcatt attttaggga gaataacgtc atatatcaat ctccatatga attaagagta
     3001 caaaataaac taagactagt tgctgaaaca cctgctcaca ttgttttact gcaccgtgag
     3061 tttttcctta attatgcaac aaaccaacct gcttattctg aaaaattagt gcgagcaatt
     3121 atggataatg ccgcgagttt tatgtttgag ttaatgaaga atgaccttaa atcagaggac
     3181 cgattggctt attcattaca acagctatgc caaagtttag aattagaagt gaaaaatgag
     3241 ttttatctac tgcctcatta tattaataag aataaattgg cgctttatag tgatatttcg
     3301 aggaaaagtt tatacaaata ccttcaaaat ttagaaagaa aaggacaaat caaaatgaat
     3361 ggtaatcaaa tacttgtccg catttcgcga ttcacaaata gcgagaatgt agattggttg
     3421 tagaacaaaa aagccgtaat tactggcaaa attaataatt cgaaaaaacg acacatgatt
     3481 gatagtatgg agtggatttt acacatattt gtcctcctcg cctttgatat actttacaaa
     3541 tcaagtgaga cctatacgat aattacatca tttagataac ttgaaattgt aaagttgaag
     3601 gggcaaaaaa aatgaaatta ggtaaagtag gagccttact tctcggtacg gctttagttt
     3661 tccaggcacc attccaagtt ttcgcaacga gtgtaaatgg agaagaacag gtgaaaaaag
     3721 aagctgctgc gccaaaaata tccgttaaca agcaaacctt agctgctacc agtgatttag
     3781 aacaaacggt aggggaagca attaccaaaa cgatacatct tcaagatcaa gcattaccaa
     3841 acaatgaatg gggtagctat atttctgacg tgaaagtaac attatccaat atggacggaa
     3901 ttagttatga cgtgaaatac ggaccgctaa gtgaagacgg tacgcactat caatatgcag
     3961 acataacact ttcaggagca ccgacaaaag ctggaacagg aagcattagc cttgaatatt
     4021 acgacggggc aggtaacggt ggagtttaca gttattctgt aaacacaaaa tctaaaacaa
     4081 ctatccaata tgtagatggt gatggaaata aattagcaga ggatacagtg aaaacgggtg
     4141 atttaaatac agcctatacc tctgaaccaa aaacgattga tggatatgaa gtagacgaaa
     4201 caaaacttcc tagcaatcaa aatggtcagt ttgctgaaac aaatcagaca gttacgtaca
     4261 tctactcaaa aacgaaaagt gaagtaaata aaggaacggt cggtatttca ttctatactc
     4321 ctgatggtag ccgccgggaa cttaagtcct cattagactt aagttatgcc tacccagatg
     4381 gtgtcccaac agacacagta acattcggcg atttagcaaa aaatacgact tacaaagatt
     4441 taagaaatac gcctgatgcg cctactcttt tatggaatga tttgttacat tacatggtag
     4501 actacatgaa cggcgatata gatgccgctc aatttgaaga ggcagttggg ctaacaccag
     4561 cgaattttga tttagatttt atttcacgaa atttcgaagg atataaattt gatgaagcaa
     4621 tgtatcaaga aaatctaagt aaattagtca cttttgagca agatggcgat caagttgatt
     4681 tgcaagtacc atttaagaaa gtagaagttg gagcggatat tactgtaaaa tacgttgaca
     4741 cagcaggaaa cgaattagca tctgtagaaa cgttgagtgg tgatgtggat gataactata
     4801 cttcagaagc aaaaacaatt gatggttgga ctttaaagga aacacctaat aatgcaacag
     4861 gagtctttag taaagaggca caaacggtta cgtatgttta tgaaaaaaat gaggatacag
     4921 atgtcacacc ggctcctgac aattcagcag atacaaatga tgacagtaac tcatcagata
     4981 atactgcgac aacagatgat aatagtagta gcgcagtgaa agaaaaggcg caaacacaag
     5041 caagtagtcc aaaggcagga aaagtaacca cacaagagag cacttctaac aaagtaacag
     5101 cacaatcaaa agaatcactt cctaaaacgg gagataacgt gttggaaagt agcttgttag
     5161 tgggcttggg tatgcttttg ttagggggat tatttgtatt ccttcgtaaa actagaaaag
     5221 taaaataaaa aaacgcccag tatttgagcg atttcagact gtagacaaag tgagaaatca
     5281 ttttatctac agtctgtttt ttgaagttat ttattaaact tcatcatatg cttctaaggc
     5341 aacaggtagg gcgcttataa cagtatttcc tacagccggt agaccaacga gaacggcgct
     5401 aataatctca tcacgcgtcg caccgtttgt ctttgccatt ttcacatgga aagggagccc
     5461 gctttctaag cgagtggcag ccataacagc aatgtatgct agttcttctg tttttttatc
     5521 gagtttactt gcggcatcta gtttatgtac ggtttccatc caggcagagt gtacttcggg
     5581 agcttctttc gcgaacgctt caaatgattt gcttactttc attgaactca tctcctaact
     5641 tttattataa taaaaaaccg cccaaacagt ggacggtttt cgtattatct attttctgct
     5701 ttattataag cgccatgcca aacaggaccg atgaattcgt ttagtgcaaa tccacctttg
     5761 atagctgcag tgacaaagtc ttttgctttt gcgactgctt cttcaaccgt taaacctttt
     5821 gcaagtccag ctgtgattgc tgctgcgaaa gtacagccag cgccgtgatt gtggcttgga
     5881 gagatttttt ctacttcata gatagtaaat tctttgccat catatagtag gtcaattgct
     5941 ttgtcgcttt ctagggcttt tccgcctttg ataactacgt atttagcacc taattcgatg
     6001 atttttttcg ctgctttttt catatcatct aatgtagtta atttgccaag accggataat
     6061 tgacctgctt cgaataggtt tggtgttgtg attgttgctt ttggaagcag taggtcgcgg
     6121 atagcttccg cgttttctgg ttggattaat tcgtcttcgc ctttacaaac cataacggga
     6181 tcgattacga cattttttaa atcatatttg tcgatggctt cgcgtgtagc tttaatgatg
     6241 tcaattgaac cgagcatacc tgttttcatt gcgtcaacag gaccaccaga aaggattgtt
     6301 ttaagttgtt cgcgaacaag ttgcgcatca attggagtaa cgccgtgcgc ccagttgtta
     6361 tctggatcca ttgttacgat tgttgtgatt gcgctaaaac cataagtgcc gtattcttca
     6421 aacgttttta aatcggcttg taaaccagca ccgccacttg aatcagaacc tgcaatagtt
     6481 aatgtttttt tgattgtcat cgtgtttcct cctataaata aactttagtc atttgtttct
     6541 aacattttat agatggctgc tgcaacgccg tgctcatcat tcgaaagggt tacgtgttct
     6601 gcaagatctt tgacttcttc ttcgccgtta cccatagcta cactataacc agccattttt
     6661 agcatcgaaa tatcattcat attatctcca attgcaaaag tttcatcaag tgttacgcct
     6721 aatttttcta cgtaatattg taaagaaata cctttttgtg cttcgcggtg agtgatttca
     6781 atattatcag agaaagaaga tgtaacggat agttcggaat ctttttctag tttttgtttg
     6841 gcttttgcaa gaatgtcttt atcagaagag aaggaaatga attttagaat ggttaaatct
     6901 ttattgccta aaatacgttc tacatctgga atttcgtgaa cgtccttcga ttcaaaacgt
     6961 tcttctactt tgtccataat ggtttctgcg ggaacgtctg ggtggatgcg tttgtgcatt
     7021 tcaatcataa attctttgcc acgagctttg tctgttgtga ttgggcccat gtcagtgaaa
     7081 aattcggtat acatacctaa ttcagtcagc gtgttgtaag tgtttcttgc taggtttcta
     7141 tcgatcggat gttgcaaaat tattttgccg tgttcatcgc ggatttccgc accattcata
     7201 caaattgctg gtgcatataa attagcttta ttaattaacc ccattgcatc gtcatacata
     7261 cgtccggtgc aaagaacgaa atgaattcct ttggcgcggg ctttttcgat tgcctcgacg
     7321 ttttcttgtg caatctcgat atcagagtta agtagtgtgc catccatgtc tgaagcaata
     7381 actttaatca taatattaaa ttcctcccca attttaccta ctccactaga atatcatttt
     7441 tttaagaaaa atgcacaaaa ggtagctgcg cgtagttttt taggtggagc gattacttta
     7501 ctatatttct gtgattcatt tggttataat gaataagaat aaaacgtgga taggatgtgt
     7561 caggatgaaa acagaactag aaaagatgat tgcaggagaa atgtatgatc ctagcgacag
     7621 agagctcgca cacggaagaa atcgtgcacg taagttctgc agagagatta acgatgcgat
     7681 ggattcagag tcccgtgcaa gcgtgctgaa gcgcctattc ggcggaacaa aagagaatgt
     7741 atatgtggaa cctgattttc gtgttgatta cggttctaat atatatgtag gcgaaaattt
     7801 ttatgctaat tttgattgtg ttattttaga tgtttgcgaa gtacatattg gtgataattg
     7861 tatgatggcg cctggagttc atatttatac ggcaacgcat ccgcttgatc cagtagaacg
     7921 taatagtggg ctagagcttg gtaaaccagt tgaaattggc gataatgttt ggattggtgg
     7981 tcgggcaatt attaatccag gggttaagct tggaaataat gtcgtggttg cttcaggcgc
     8041 agttgtaacg aaaagcttcc ccgataatgt cgttcttgcc ggcaacccag cacgcgttat
     8101 taaaacaatt gaggttgagg aaaaatgatt attgcagatt caaagatttt tgaacaaatg
     8161 gaaaacgaat tagcgaaagc aaaagcagca accacaaaag cgagtcaaga taagcatttg
     8221 catggtttga tgctgcttgt tcagcttgca aaaacaggcg atgagacaac tgcggctgta
     8281 gaaccgattg ctattcagtc agcagaaccg gcgcaaattg caagtatgga cgggaagaaa
     8341 atagagttag aagacggcgc gaatggagac tcgttgcttg atttttaggg ggtaactatg
     8401 aaaaaaacaa ttattacggg agccattttt gcagggctgg cagttttact aggggctttt
     8461 ggggcacatg ctttaaaaga cgtacttgga agttatgcga gtacttggga aaccggcgtt
     8521 cagtaccaaa tgtttcacgc aggaggcatt ttagttgtag ggctattgat ggaaaaacaa
     8581 gctagtcggc tttacacatg ggcagcgatt ttattttcgg tcggaattgt ctttttctcg
     8641 ggtagtttgt atgtgttaag tatttctaaa gtatccattt taggtgcgat tacgcctatc
     8701 ggtggtgttt gctttgtcgt tggttggttc ttgctaattt taggagtatc aagaagaacg
     8761 atgagtagat attaaatcaa aataatcgtc ttttcgcgtt catttcagtg aaaagacgat
     8821 tgttttttct tattggcaaa taagtgctaa aataaaggaa tcataattta taaggagaca
     8881 gcaattacat gacttatgca cttgaaataa aagggttaag aaaaatttat tccactgggg
     8941 tcgaagcgtt gcgcggtgtg gatttaacgg tagaagaagg agatttttat gcactgcttg
     9001 gtcctaatgg tgccgggaaa tcaacgacga ttggtattat tacttcacta gtcaataaaa
     9061 catctggtca agtaagcgta tttggctatg atctcgatac agatatagtt cgagcaaaac
     9121 agcaaatcgg actagttccg caagagttta actttaatcc gttcgaaacg gttcagcaaa
     9181 tcgttgttaa ccaagctggc tattacggtg tttctcgtaa ggaagctatc aaacgtagcg
     9241 aaaaatattt aaaacaatcg aatttgtggg agaaacggaa tgaacgtgcg cggatgcttt
     9301 cgggcgggat gaaacgccgc ttgatgattg cgcgggctct catgcatgaa ccgaagctgc
     9361 ttattttaga tgaaccgact gctggtgtcg acattgaact tagacgtgag atgtggacgt
     9421 ttttaagaga gttgaacgaa agcggtacga cgattatttt gacgacgcat tacttagaag
     9481 aagcagagat gctttgtcgt aatatcggta ttattcaatc tggggagtta attgagaata
     9541 ccagcatgaa atcactactt tctaaattgc aatttgaaac gtttattttt gatttagaac
     9601 cgtatgaaga agctttcgaa attacgggtt ataatcatgt gtttgaagat aagcaaactt
     9661 tgtctgtgga agtggaacgt aatcagggag ttaaccatat ctttgagcaa ttaagcgaac
     9721 acggtattaa agtgctttcg atgcgtaata aatcgaatcg cctggaagaa ctattcttga
     9781 aaattacaga agaaaaacat caagtggggg agaaacatgt ttaatctata ttttacagct
     9841 ttaaaaagtc tagcggcgaa agaaacgaat cgctatatgc gaatttgggt acaaacactc
     9901 gtgccgccag ttatcacgac ttcgctttat tttattattt tcgggaaaat gattggtagc
     9961 cgcattgggg aaatgaatgg cttttcttat atggagtaca ttgtgccggg gctgattatg
    10021 atgtccgtca ttactagttc ttacgccaat gtatcgtctt cctttttctc gcaaaagttt
    10081 cagaaaaaca ttgaagaaat tcttgttgcg ccggtgccaa cgcatattat tatttggggc
    10141 tttttgattg gtgggattgg tagaagtgtt ttagttggag cacttgtcac gcttatttcg
    10201 atggtgtttg tgccgattca cattcattcg tggacgattg gtattattac cttcttaatg
    10261 acggcgattt tattttcact cgcgggactt attaacggga ttttcgctag atcatttgac
    10321 gatgtatcca ttgtcccaac ttttgtctta caaccgttaa cgtatctagg cggcgtattc
    10381 tacgcgattt cgatgttacc gccaatctgg caagcgattt ctaaagtgaa cccgattgtc
    10441 tatatgattt ccggattccg ctacggtttc ctaggtgtta cagatgtacc agtagcaatt
    10501 tctctatcca ttcttgttgt atttagtgcc gttctttact cgatttgttg gtatttaatt
    10561 agtaaagggc gaggacttcg aagttaatag cgattttttc aaagagagag cggatttccg
    10621 ttctcttttt ttcatgttta ctacaattct ttttcaattt gatgttaaac gttttagcgt
    10681 aaaactggag ggaagacatt aagtaatggg ggtagtgaaa atgggaaata aaaaagtgaa
    10741 gcgaaaactt ggcgctaata tttggtggat acttatattg gccattttaa taattttcgt
    10801 agcctactta gtcatgggtt acgttgcaaa aatataggag gtttttatga tgaataaaga
    10861 aaatccatta aacaaatacc atacaggaaa atttgaaaag caacgccagg attatcctgg
    10921 tttgcaaagt aaaatgacgc ctgttccaga tacgggcgaa tcaagttatc aaggcgcgaa
    10981 taaattaacc gggaaaaaag cctttgtaac aggaggcgac tcgggaatag gtcgagctgc
    11041 ggtaattgcc tacgctcgag aaggtgctga tgtcgcgata aattatcatc cggatgaaga
    11101 agtagatgca caggaagtta aagcgattgt tgaggaagct ggacagaaat gtgtcttatt
    11161 accaggtgat ttaagaaaag aaggtttagc gaaagattta gtaaaaaaag catataacga
    11221 gttaggtgga ctagatattc tagtgctaaa cgctggacta cagcaatatc aattagatat
    11281 tcaaaaactt ccagctgaac aattacgtga cacatttgaa gtgaacgtct tctccgttgt
    11341 gttcgcaatt caagaagcac ttaattactt aaaagcagga gcaagtatca ttttaacgtc
    11401 ctccattcaa ggcgttaaac caagcgctca ccttgttgac tatgcaatga caaaaagtag
    11461 tttaatttcg cttactaaaa gtttagcggc acaactaggg gaaaaaggta ttcgaattaa
    11521 tgcggttgca ccaggaccaa tttggacggc gctgcaaatt tctgggggac aaccacaaga
    11581 tagtattcct gcatttggtc aagatcagcc acttggacga gcagggcaac ccgcagaact
    11641 tgcgagcgct tatgtgctac tagcatcaga tgaagcaagt tatacaacgg gccaagtata
    11701 cggaattacc ggcggagctc ctattaatta aaagcgaggt gaaagttcgt gccgtggaca
    11761 aaaaatgatt atccggattc gtggaaaaat ctaagaaaga ccgaacgcga aaaagctatt
    11821 gaaatcggca atgccctatt aaaagatggc tactcagaaa gccgcgctat cccaattgcc
    11881 acttcgaaag cagaagaatg gtataaaaat cataaggaat cgtaatgttt agatgaaaaa
    11941 atacttggaa cgctaggctt taagtctatt gtttcaagtg ttttaatttt gataaaaaaa
    12001 gtgtactatt taaattaaga gagatgatga caactaggag gaacttttta tgaataaaag
    12061 aagatggatt ttcagcactg tggttgcagc tttcctattg attattggag gatttttagt
    12121 ttatcaacag atgacaccaa aaccattcac cgaagtagtg gcagaagcta aaatcgacgg
    12181 ttatgagagt ggggatgaat tagaaaacgc tagtactgtc atcgtaacag gtcaactaga
    12241 aaaacgcgga gattcaataa tagagcgagc ttcagatgat gctgtgatag gtgtatatag
    12301 aatgtctact tttaaaatag cccaagtttt aaaaaacgaa acggatgaca acttagcaaa
    12361 agaaatgaca atatctgttt atgaaaatga aggttacgat gccaaagcga atacgacata
    12421 ccatatcgct ggctatacaa aaatggaaaa agaagaaaaa tatctgttgt tgttgcaaaa
    12481 agattcagaa gatgactatt atgtcccgac agcggttatt ttcggaaaaa taaacctcaa
    12541 tccgaataaa cgaaatgaat tatttcctaa aaatagcgac acagaatcag caatcaataa
    12601 agtacaagcc gaagttttaa aaaatcttga aaatgaaatt gagcgagaga ataaataatt
    12661 gtactctgtt gcattttagt taaattcgtc atctaatttt aatacaaaaa aagggtttgg
    12721 attgggggag acgggtatta tataaccata agcaatgaca atgccattac tttttctccc
    12781 ttttttgtag tgggttgtct ttacttacct taaactccct tttatacttt tagcggttgt
    12841 tagcagccac taagagtatt tttttgtaaa aaacactaaa taaatgaaaa ctcctcgaac
    12901 aagggaaagt tcgaggagtt cggcatttac caatatttat aaatgccact ggggattttc
    12961 taagtgaaca aagatatgga tgtttgggag agcatccact tggagaattt accatagata
    13021 gatagcgaca agttgtaatg tagtataaat ca
//
LOCUS       DASDYK010000081        12988 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.081, whole genome shotgun sequence.
ACCESSION   DASDYK010000081 DASDYK010000000
VERSION     DASDYK010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12988
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.081"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..369)
                     /locus_tag="U0308_002106"
     CDS             complement(<1..369)
                     /locus_tag="U0308_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2317067.1"
                     /translation="MRREKTMDTLIRSIMIKSKRKMDAKVAQFGLTTQQARVLGFLND
                     NAANEIIQKDLQRIFQTRGASITSLIQGLEKKELISRKPSIRDGREKVVTLTEEGKRI
                     VDEFNESFPREDDKAKKILSA"
     gene            complement(477..2045)
                     /locus_tag="U0308_002107"
     CDS             complement(477..2045)
                     /locus_tag="U0308_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEM2317068.1"
                     /translation="MSQDLQKEVASRKTFAIISHPDAGKTTITEQLLLFGGVIRSAGT
                     VKGKKSGKFATSDWMEIEKQRGISVTSSVMQFDYNGSRINILDTPGHSDFSEDTYRTL
                     MAVDSAVMVIDAAKGIEAQTLKLFKVCRMRGIPIFTFINKMDRQGKMPLELLAELEEV
                     LGIESYPMNWPIGMGKELAGLYDRYHRVIEQYRSEEDERFLPLGEDGDLKEAHAIQKS
                     LYYDQALEEIMLLDEAGNDFSRERIIAGEQTPVFFGSALTNFGVETFLRTFVDFAPSP
                     SSHESNEGVIEADNPKFSGFIFKIQANMNPAHRDRIAFIRICSGEFERGMNVTLTRTG
                     KSMKLANSTQFMADDRETVNRAVAGDIIGLYDTGNYQIGDTITNGSKKLEFEKLPQFT
                     PELFMRVYAKNVMKQKHFHKGVEQLVQEGAIQLFKTWRTEEYIIGAVGQLQFEVFEHR
                     MRGEYNSEIRMEPIGKKIARWVKEEDADEKLSTARSMLVKDRFDQPLFLFENEFAINW
                     FNDKNPDIELTSLL"
     gene            complement(2127..2981)
                     /locus_tag="U0308_002108"
     CDS             complement(2127..2981)
                     /locus_tag="U0308_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317069.1"
                     /translation="MISRNLKIYFRDRTAVFMSLLTVLIIIGLYAIFLGNNMEEMFKQ
                     ASGKTIGIQELVNTWVIAGILSITPVTVSLAVFSLKVHDEELSIARSFAITPASRWRI
                     VISYIVSGLVASFLLSVVTLFVGEMYIWLTGGAFLPFESWIRLIGVILINVFCCSSMM
                     FFIASLVKKASAFSSVSTIVGTVIGFIAGIYLPIGSLPATVQTAMKCFPFTYGASTIR
                     EIMTKEPLQQVFAGNTQAMDATKEMIGITIYWSDKTVTTGLSLLILSAFAVVFGVLSV
                     ILMKRQTK"
     gene            complement(2974..3885)
                     /locus_tag="U0308_002109"
     CDS             complement(2974..3885)
                     /locus_tag="U0308_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317070.1"
                     /translation="MIKLINVVKKFGKIEAVKGINLEVEKGSLFAFLGENGAGKSTTL
                     SMICTESEPTSGEIFIDDEKLTFKNRKLFRQKLGVVFQENVLDDLLTVRENLYNRASL
                     YGKTKAEITERLALVSSIMGIEDILNRRFEKLSGGQKRRAEIARAIMHDPEILLLDEP
                     TTGLDPKTRVSVWKIIDYLREELGMTVFLTTHYLEEAKDADQLAVIHKGKIIAQGTPA
                     NIRSRFSVDKIFFYDAKVAELQKIMKKMNLPFKVTNRTMRVDVIDENVEILAILNQAI
                     GFYDSFEVIKGNLDDAFISMIKEDSND"
     gene            complement(3882..4310)
                     /locus_tag="U0308_002110"
     CDS             complement(3882..4310)
                     /locus_tag="U0308_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3021 family protein"
                     /protein_id="HEM2317071.1"
                     /translation="MSTKLIQFIQSACLIFSASIITMICSYIATGESETVAIRDIFIM
                     LGFSIVTTFIQQLLFNNSVKTKRAFYSRLFAFFLFIGAAILGLGWLLDWYHNIAGFMI
                     ILGFICVTFLVMHIFFSFRDVKFSNEINQKLAEMRERETK"
     gene            complement(4307..4762)
                     /locus_tag="U0308_002111"
     CDS             complement(4307..4762)
                     /locus_tag="U0308_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family transcriptional regulator
                     DNA-binding domain-containing protein"
                     /protein_id="HEM2317072.1"
                     /translation="MKFHVKQNNNLAVGEVDVYCHPDNLEEVTNMVIGIEESAEKISV
                     KKDGATYLLEPKAILYFEAVESKIFVYTEKEIYEIHWKLYELEEKFKESSFFRCSKSM
                     ILNIEWIEKIAPGFNGKFEAKLLNREKVIISRQYAKVLKQKLNMGGKRK"
     gene            complement(4895..5374)
                     /locus_tag="U0308_002112"
     CDS             complement(4895..5374)
                     /locus_tag="U0308_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEM2317073.1"
                     /translation="MNVHDFSEKAMNGKEIALSDYKGKVLLIVNTASKCGLTPQLEGL
                     EAMYKKLGGANFEILGFPCNQFLRQDPGSDEEILEFCQMNYGVTFQMFSKIKVKGKDA
                     SPLYKYLTEQTGGKKVEWNFAKFLIDENGEVVERFPSKMKPADFEDKVEALVAKVNN"
     gene            complement(5387..6439)
                     /locus_tag="U0308_002113"
     CDS             complement(5387..6439)
                     /locus_tag="U0308_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HEM2317074.1"
                     /translation="MSYEPNTKETMQKIKELTSIPSPTGNTGKIIEKLAKDLDASKIP
                     YHLNNKGGLIVTLPGKDDTKHRMLTAHVDTLGAMVKEIKADGRLLLTLIGGYRFNAIE
                     GEYCTIETSDGDLYSGTILMHQTSVHVYKDAGTAERNDKNMEVRLDVKALDADKVRAL
                     GIEVGDFVSFDPRVQIINDEYIKSRHLDDKASVAILLQLINHIHENKLELPHTTHFLI
                     SNNEEIGYGGNSNIPSETVEYLAVDMGALGDGQTSDEYTVSICAKDGSGPYHLGLRKH
                     LVELAKSNNIDYKVDIYPFYASDASAAINAGNDIVHGLIGPGIDASHAYERTHRDSLY
                     HTEKLVYAYLFSNILK"
     gene            6580..8055
                     /locus_tag="U0308_002114"
     CDS             6580..8055
                     /locus_tag="U0308_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2317075.1"
                     /translation="MEQTKVKAVTIAVFVATFMAAIEGTIVSTAMPTIVSQLDGIELM
                     NWIFSVYLLTSAVTVPIYGKLSDLYGRKNIFVIATIIFIIGSSLCGFAQNMEQLIIFR
                     AIQGIGAGGILPSTMTIIADVYPFEKRAKVLGFMGSAWGIAGVFGPLVGGFLVDQLSW
                     HWIFFINVPIGILTILLILLYLREKVEHVKLPIDYLGASLFTVALLGLLFALQRAGES
                     LNWIEPLVVILFAVSIVLFIAFYFVEKRAKDPIMPFVLFKNPVVLIGNLIGFLISAFL
                     IGINVYIPMWAQGMLGHGATIAGFMLAPLSVTWIIGSFIGGKLLMTLGNRHTVGIGVL
                     ITAASGLILALFPASTNDIFFYLNSAFMGFGFGIIFTTTTVTVQDAVPRFQTGIATAS
                     NTLFRTVGQTIGVAVFGTIFNSVLTSEFRDAAGSEVNRSNLNQLISPQTSGNVSADLV
                     DPLRDILYSGLHMVFWVMFACCIVSYFIHFILPKKHISGEK"
     gene            complement(8089..8841)
                     /gene="lieB"
                     /locus_tag="U0308_002115"
     CDS             complement(8089..8841)
                     /gene="lieB"
                     /locus_tag="U0308_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464505.1"
                     /note="ABC transporter involved in aurantimycin A
                     resistance; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux ABC transporter permease LieB"
                     /protein_id="HEM2317076.1"
                     /translation="MKAIRDTSILFGRSMRHIMRSPDTIITVAIIPIMIMLMFVYVLG
                     GAIQTGTDNYVDYLLPGIILMAIASGIAYTAVRLFTDVQKGLFQRFHSMPISRSSVLW
                     GHVLTSLVSNVISIVLIILVALLIGFRSSAGIVEWLSVAGILLLFTLALTWVAVIPGL
                     TAKSVDGASAFSYPLIFLPFISSAFVPTDTMPTAVRVFAENQPVTSIVNTIRGLLYSE
                     PIGNDIWIALAWCVGITVVAYVFAITIYKKMV"
     gene            complement(8838..9602)
                     /gene="lieA"
                     /locus_tag="U0308_002116"
     CDS             complement(8838..9602)
                     /gene="lieA"
                     /locus_tag="U0308_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464504.1"
                     /note="ABC transporter involved in aurantimycin A
                     resistance; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux ABC transporter ATP-binding
                     protein LieA"
                     /protein_id="HEM2317077.1"
                     /translation="MKEVMIKATGLEKSFKKTEVLKGVDFEVKHGEIFALLGSNGAGK
                     TTTIQILATLLKADNGLATVSSFDVKTEPEKVRKHISLTGQFAAVDGLLTGRENILLI
                     AKLRGEKNPAQTADDLLARFGLEKAADRRADTYSGGMTRRLDIAMSLVGSPDVIFLDE
                     PTTGLDPEGRMEVWKTIKTLSDGGTTILLTTQYLDEAEQLADRIAILHGGTIIANGTL
                     DELKKLFPPAEVEYIEKQPSLEEIFLAIINGKEEVK"
     gene            complement(9800..10819)
                     /locus_tag="U0308_002117"
     CDS             complement(9800..10819)
                     /locus_tag="U0308_002117"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HEM2317078.1"
                     /translation="MSKDIDWSNLGFSYIKTDKRYISYWKDGEWDEGTLTEDNTLHIS
                     EGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDA
                     VMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAPEYIFSVFCSPVGPYFKGG
                     MAPTNFIVSDFDRAAPNGTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIE
                     EVGSANFFGITKDDKFVTPYSPSILPSITKYSLLYLAEHRLGLEALEGDVYIDKLDEF
                     KEAGACGTAAVITPIGGIQTKDDFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGW
                     IYKVK"
     gene            11038..11787
                     /locus_tag="U0308_002118"
     CDS             11038..11787
                     /locus_tag="U0308_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HEM2317079.1"
                     /translation="MTAHKMLDEKFYSKSLGEELDLIICLPPDFSPLYKYPLFIVQDG
                     KDYFQFGKLARHSEELALNEQIQKAIFIGIPYKTVMDRREKYHPDGKQNDAYIRFLAF
                     ELVPYLEERFPSFQMPTSRFLMGDSLGASVSLKAALLFPFTFGNVILHSPYVDDTILT
                     LAEKVDPSKVKIFHIIGDRETAVETSGNEVLDFLSPNKSLEQILTTRGFDYYFHVFNG
                     DHRWKYWQPFIKDSLQFMLPVNTFDLESMRA"
     gene            11805..12233
                     /locus_tag="U0308_002119"
     CDS             11805..12233
                     /locus_tag="U0308_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2317080.1"
                     /translation="MTVKKVTDDIGKQAALKIRNDVFVVEQHVDPALEWDEFDEIDSV
                     VMFVDYAEDGTPLATGRFREKDGYGKVERICTQKIARGTGSGRRIMEAIESEAKSRGL
                     TTLKLGAQVTAIPFYEKLGYETCSGLFLDAGIEHKEMKKH"
     gene            complement(12283..12957)
                     /gene="rpiA"
                     /locus_tag="U0308_002120"
     CDS             complement(12283..12957)
                     /gene="rpiA"
                     /locus_tag="U0308_002120"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEM2317081.1"
                     /translation="MINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNG
                     LHITGVATSEETSKQAQNLGIPLKSLNDVAEIDITIDGADEIDTDFQGIKGGGGALLR
                     EKMVASASLKNIWVVSEEKLVRNLGKFPLPIEVIPFGWKQIERTLEKEHVQTILRRQS
                     SGEIYVTNNGNYILDIVNQTFRDAEMWQEKLAQIPGIVEHGLFLHYVDIIVCAKANGE
                     IELIKK"
BASE COUNT         3926 a         2731 c         2110 g         4221 t
ORIGIN      
        1 agcggaaagg atttttttcg ctttatcatc ttcacgcggg aaggattcat taaattcgtc
       61 cactattcgt ttaccttctt cagttaaagt gaccactttt tctctgccgt ctcgaatgct
      121 tggtttacga gaaattaatt cttttttctc gagtccttga atgaggctag taatacttgc
      181 gccacgcgtt tggaagattc gctgaagatc tttttggata atttcatttg ccgcattatc
      241 atttaaaaac cctagaactc tagcttgttg agttgtcagc ccaaattgag ctacttttgc
      301 gtccattttc cgtttggatt taatcataat cgaacgaatt aacgtatcca tcgttttctc
      361 tcttctcacg agtattcctc cttattaatt agaattctaa ctaattatag cgcatttcaa
      421 aaaattgtca agcaaaaaaa caacctattt gcgaaagtac aaataggttg cagctattat
      481 agtaatgaag ttaattcgat atctggattt ttatcattaa accaattaat tgcgaattca
      541 ttttcaaata agaataacgg ttggtcgaag cggtctttta cgagcatact tcgagcggtg
      601 gatagttttt catccgcatc ttcttctttg acccaacgag cgattttttt gccgattggt
      661 tccatccgaa tttctgaatt atattcgcca cgcattctgt gttcgaatac ttcaaattgc
      721 aactgaccaa cagccccaat aatgtattct tccgtgcgcc acgttttaaa taattgaatc
      781 gcaccttctt gaacaagttg ctcgacgcct ttatggaaat gcttttgttt cataacattt
      841 ttcgcataaa cacgcataaa taattctggg gtaaactgcg gaagtttttc aaattcaagt
      901 tttttacttc cattagtaat cgtatcgcca atttggtaat ttcccgtgtc gtacaaaccg
      961 ataatatcac cagctaccgc acgattaaca gtttcccggt catccgccat aaactgcgtt
     1021 gagttagcaa gcttcatact tttgcccgtt cgcgttaacg taacattcat gccgcgttca
     1081 aattcgcctg aacaaattcg aataaaggca atccggtccc ggtgagcagg attcatattc
     1141 gcttggattt tgaaaataaa gccagaaaac ttcggattat cagcttcaat cacgccctca
     1201 ttcgattcat gacttgaagg agatggcgca aaatcaacaa atgtacgtaa gaaagtttct
     1261 acaccaaaat tagttaaggc acttccaaag aatactggtg tttgttcacc ggcaataata
     1321 cgttcccggc taaaatcatt tccagcctca tcaagtaaca taatttcttc caatgcttga
     1381 tcataataaa gtgatttttg aatagcatgt gcttctttca aatcaccatc ttcaccaagt
     1441 ggcaagaaac gctcatcttc ctctgaacga tattgttcaa tcacacgatg atagcggtca
     1501 taaagcccag caagctcttt ccccatacca attggccagt tcattggata cgattcaatg
     1561 ccaagaactt cttctaattc agcaagtaat tcaagcggca ttttcccttg acggtccatt
     1621 ttattaataa aagtaaaaat tggaatcccg cgcatccgac aaactttgaa aagttttagc
     1681 gtttgggctt caatcccttt cgcagcatcg ataaccataa ctgcactatc cactgccatc
     1741 aatgtccggt acgtatcctc actgaaatcc gagtgacccg gtgtatccaa aatattaatt
     1801 cttgaaccat tataatcaaa ctgcatcaca gaactcgtta ccgagatacc acgttgtttt
     1861 tcaatttcca tccagtcact tgtcgcaaac ttgccagatt tctttccctt tacagtccca
     1921 gctgaacgaa taacgccacc gaataataat aattgttccg taatcgtcgt tttcccagca
     1981 tccgggtgag aaataatcgc aaacgttttg cgtgaagcaa cttctttttg caaatcttga
     2041 ctcattgtta ttttcctcct agattcattc acattccatt agtatagcat aactaggaga
     2101 atttcggctg attttttatt caaaaattat tttgtttgtc gtttcatgag gatcacagat
     2161 aatacaccaa acacgactgc aaaggcactt aaaataagta aactaagccc tgttgtaact
     2221 gttttatcgc tccaataaat cgtaattcca atcatttctt ttgttgcatc catcgcctga
     2281 gtattacctg caaaaacttg ttgtaatggc tctttcgtca tgatttctcg aatggtagaa
     2341 gctccgtatg tgaaaggaaa acatttcatc gcagtttgca ccgtagccgg aagtgaacca
     2401 atgggtaaat aaatccctgc aataaaacca ataacagtcc caacaatcgt cgaaacggag
     2461 ctaaaggcac tcgctttttt taccaaactg gcgataaaga acatcatact actacaacag
     2521 aaaacattaa ttaaaataac cccaattaaa cgaatccagc tctcaaaagg taaaaatgct
     2581 ccgccagtca accaaatata catttctcca acaaaaagtg ttacaacaga caacaagaag
     2641 gaagcaacta gtccactaac aatataacta ataacaatac gccatctgga agctggtgtt
     2701 atcgcaaagc ttctcgcaat acttaattct tcatcatgta ctttcaaaga aaaaacagct
     2761 aacgatactg tcacaggtgt aatggataaa atccccgcaa tcacccaagt attcactaat
     2821 tcttgaatcc ctatcgtttt tccagaagcc tgtttgaaca tctcttccat attatttcct
     2881 aaaaaaatcg catacagccc aataataatt aaaacagtta gtaatgacat aaatacagct
     2941 gttctatcac gaaaataaat ttttaaatta cgactaatca ttggagtcct ccttaatcat
     3001 cgaaataaaa gcgtcatcta agttcccttt aatcacctca aaagagtcgt aaaatcctat
     3061 agcctgattt aaaatagcca atatttcgac attttcatct atgacatcta cacgcatcgt
     3121 tctgttagtc actttaaatg gtaaattcat ttttttcatt attttttgaa gttctgcaac
     3181 ttttgcatcg taaaagaaaa ttttgtctac agaaaaacga cttctaatgt ttgctggtgt
     3241 cccttgcgcg atgattttcc ccttatggat tacagccaac tgatccgcat ctttggcttc
     3301 ttctaaataa tgtgtcgtta aaaacaccgt cattcctaat tcttctcgca aataatcaat
     3361 aattttccat acactcactc tagtttttgg gtccagtccg gtcgttggct catctagcag
     3421 caaaatttct gggtcatgca taattgccct agcaatttcc gcgcgacgtt tttgaccacc
     3481 agacaatttt tcaaaacgcc gatttaaaat atcctcaatg cccataatag aagaaactag
     3541 cgctaatcgt tccgtaattt ctgcttttgt tttcccatat aaactagcac gattatataa
     3601 attttcgcgc accgtgagta agtcatccaa cacattttct tggaaaacaa cgcctagttt
     3661 ttgtctaaat aatttacggt ttttaaatgt caatttttca tcatcaatga aaatttctcc
     3721 cgaagttggt tcgctttctg tgcaaatcat gctaagcgta gtcgatttac ccgcaccatt
     3781 ttcgcctaga aaagcaaata acgagccttt ttcaacttct aaattaatac ctttgacagc
     3841 ctcgattttg ccaaattttt taactacatt gatcaatttt atcattttgt ctccctttct
     3901 cgcatttctg ctagtttttg attaatttca ttactgaatt tcacatcacg gaagctgaag
     3961 aaaatatgca ttacaaggaa agtcacacaa ataaagccca aaataatcat aaacccagct
     4021 atgttatgat accaatccag caaccaacca agccctaaaa ttgctgcgcc aataaagagg
     4081 aagaaagcaa acaaacgact gtaaaaagca cgtttcgttt tcactgagtt attaaataat
     4141 aattgctgta tgaatgttgt cacaatacta aaacctagca taataaaaat atcccggatt
     4201 gcgaccgttt ctgattctcc agttgcgatg taagagcaga tcatcgtgat aatagaggca
     4261 gaaaaaataa ggcatgctga ttgtataaat tgaattagtt ttgtactcat ttccgcttac
     4321 ctcccatgtt taatttttgc tttaaaacct tcgcgtactg ccgagaaata attacttttt
     4381 ctcgatttaa aagtttcgct tcaaatttac cgttgaagcc aggggcaatc ttttcaatcc
     4441 attcaatatt taagatcatt gatttcgaac atctgaaaaa agaactctcc ttgaattttt
     4501 cttccagttc atataatttc caatggattt cataaatttc tttttccgta taaacaaaaa
     4561 tcttactttc gactgcctca aaatataaaa tggcttttgg ttctagtaaa taagtggctc
     4621 catccttttt gactgagatt ttttcagctg actcttctat tcctattacc atgttcgtta
     4681 cttcttctaa attatcggga tggcaataca catccacttc accaactgct aaattattat
     4741 tttgcttcac atggaatttc atctggttgc ctcccttttt attttattat aaacgccatg
     4801 tcaaaaacta caagctgatt tcagtaacat gcatttttaa ctaactaaga tgcaaaaaac
     4861 tcggtagtac tataatagca ctaccgagtt ttccttaatt atttactttc gcaacaagtg
     4921 cttccacttt atcctcaaaa tctgctggtt tcattttaga tgggaaacgt tcaacaactt
     4981 ctccattttc atcaattaag aatttcgcaa agttccattc tactttttta ccacccgttt
     5041 gttcggttaa atatttataa agtgggctgg catctttgcc ttttacttta attttggaaa
     5101 acatttggaa agtcacacca taattcattt ggcaaaattc taaaatttcc tcatcactgc
     5161 caggatcttg tcgcaaaaac tggttacacg ggaaaccgag gatttcaaaa ttagcgccac
     5221 ccaatttttt atacattgct tcgagacctt ctaattgggg tgttaagcca catttactcg
     5281 cagtattcac gatgagtaat accttacctt tataatcact taaagctatt tctttgccat
     5341 tcattgcttt ttcagaaaaa tcatggacat tcatatggga ttcctcctat ttcaatatat
     5401 ttgaaaataa atatgcataa actaattttt ctgtatggta aagtgaatcg cggtgtgtgc
     5461 gttcatatgc atggctagca tcaatacctg gtccaatcaa accatggaca atatcattac
     5521 cagcattaat tgccgcactc gcatcagatg cataaaacgg ataaatatcc actttataat
     5581 caatattatt gcttttagca agctccacta aatgtttgcg caaaccaagg tgatacgggc
     5641 cactaccatc ttttgcacaa atagaaacag tgtattcatc agacgtttgt ccgtcaccaa
     5701 gtgctcccat gtcgacagct aaatattcca ccgtttcaga cggaatgtta gaattaccac
     5761 catagccaat ttcttcatta ttagagatga ggaaatgggt tgtatgagga agctccagtt
     5821 tattttcgtg aatatgattg attagttgta ataaaatcgc gacacttgct ttatcatcca
     5881 aatggcgaga tttgatatat tcatcattaa taatttgcac gcgcggatca aacgaaacaa
     5941 aatcccctac ttctattcca agcgcacgaa ctttgtctgc atctaatgct tttacatcta
     6001 agcgaacttc catatttttg tcattacgct cagcagtccc agcatcttta tagacatgga
     6061 cagaagtttg atgcattaaa atggtgccac tatacaaatc tccatcactt gtctcaatgg
     6121 tacaatattc gccttcaatc gcgttaaaac ggtagcctcc aattaaggtt aaaagtaatc
     6181 gtccgtctgc tttaatttct ttgaccattg cacccagcgt atccacatgg gcggttagca
     6241 tacggtgttt cgtgtcgtct ttcccaggaa gcgttacgat taatccacct ttgttgttta
     6301 aatggtaagg gatttttgaa gcatctaaat cttttgccag tttttcgatg attttccctg
     6361 tattgccagt tgggcttggg atagatgtta attctttaat tttttgcatt gtttcttttg
     6421 tatttggttc gtatgacaaa aaaattcctc ctttagttcg ctttcttcta ttatattata
     6481 gcgcttatct tgaatatgcg catttcttag gattaacttt tttcccaatt tagtcctttt
     6541 atatgctata attcggtaga cgaaaaggga gggaattttt tggaacaaac aaaagtaaaa
     6601 gccgttacca tcgccgtatt tgtcgcaaca tttatggcag ctattgaagg taccatcgtg
     6661 agtactgcga tgccaacgat tgtaagtcag ttggacggca tagagttaat gaactggatt
     6721 ttttctgttt atttgctaac atcagcagtg acggttccga tttacggaaa actgtctgat
     6781 ttgtatggac gaaaaaatat ttttgtgatt gcgacaatta tttttattat tggttcatca
     6841 ctttgtggat ttgcacaaaa tatggaacaa ttaattattt ttcgcgcgat ccaaggtatt
     6901 ggagcaggtg ggattttacc atctactatg acgattatcg cagacgtgta tccatttgaa
     6961 aaacgagcaa aagtacttgg cttcatgggt tccgcttggg gtatcgctgg cgtatttgga
     7021 ccacttgttg gagggttttt agtagatcaa ctttcatggc attggatttt ctttatcaat
     7081 gtccctatcg gcattttaac aatcctactt attttgcttt atttacgcga aaaagtggag
     7141 catgtcaaac taccaattga ctatttaggt gcctcgctct ttacggttgc tctgcttgga
     7201 ttattatttg cgttacagcg agccggggaa tcactcaact ggatagaacc gctcgtcgtt
     7261 attctttttg ccgtttcgat tgtgttattt attgcttttt attttgtcga aaaacgtgca
     7321 aaagatccga ttatgccatt tgtattattt aaaaacccag tggtgttaat tgggaactta
     7381 attggtttct tgattagtgc cttcctaatt ggaattaacg tgtatattcc aatgtgggca
     7441 caaggaatgc ttgggcacgg ggctacgatt gctggattta tgcttgcacc gctttcagtt
     7501 acatggataa ttggttcatt tatcggcggc aaacttttaa tgacgcttgg aaatcggcat
     7561 acggttggca ttggcgtttt aattactgct gcaagtggat taattttagc cttattcccc
     7621 gcttccacaa atgatatctt cttctattta aatagtgcat ttatgggatt tggttttggg
     7681 ataatcttta caacaacaac tgttaccgtt caagatgcag taccgcgatt ccaaactggt
     7741 attgctacag cttctaacac actgtttaga acagttggtc aaacaatcgg ggtcgctgtc
     7801 tttggaacta tctttaactc agttcttaca agcgaattcc gcgacgcagc tggcagtgaa
     7861 gtaaatcgta gtaatctaaa tcaactaatt agcccgcaaa cttctggtaa cgttagtgca
     7921 gacctagttg atccgcttcg agatatttta tatagcgggc ttcatatggt tttctgggtt
     7981 atgtttgctt gctgtatcgt tagttatttt attcatttta tcttaccgaa aaaacatatt
     8041 tccggtgaaa aataaaaagt ttggctccgc ggagccaaac tttttatttt ataccatttt
     8101 tttataaata gttatcgcaa aaacatacgc aacaacggta attccgacac accaagcaag
     8161 cgcaatccaa atatcattcc cgattggttc tgaatacagc aatccacgta tcgtattaac
     8221 aattgaggtc acgggctgat tttctgcaaa aacacgaact gcagttggca tcgtatctgt
     8281 tggaacaaaa gctgaactaa tgaatggtaa aaatatgagc ggataagaaa atgcgcttgc
     8341 tccatctact gatttggcag ttaaaccagg aatcacagca acccatgtga gcgctaatgt
     8401 gaataatagc aaaataccgg ctacagaaag ccattccact attcctgccg atgaacgaaa
     8461 accaataaga agagcaacta aaataatgag cacaatagag ataacattag aaactaaaga
     8521 agttaaaaca tgaccccata ataccgaaga acgactaatt ggcatagaat gaaatcgttg
     8581 aaataatcct ttttgtacat ctgtaaataa tcgtaccgcc gtataagcaa tcccacttgc
     8641 gattgccatc aaaataattc ccggcaacaa ataatctacg taattgtctg tccccgtttg
     8701 aattgcgcct ccaagcacat acacaaacat caacataatc ataattggaa taatggcaac
     8761 tgtaataatc gtatcaggac tacgcataat atgacgcatg gagcgaccaa ataatatgct
     8821 tgtatcacga attgctttca ttttacttcc tccttcccat taataattgc taagaaaatt
     8881 tcttctagtg atggttgttt ttcgatatat tctacttcag ctggcgggaa taatttttta
     8941 agttcatcca aggttccatt tgcaataatg gttccaccgt gaaggatagc gattctatcc
     9001 gcaagctgct ctgcttcatc taaatattgc gttgttagta atatagttgt tcctccatca
     9061 gaaagtgttt taatcgtttt ccagacttcc attcgccctt ccggatcaag tccagttgtt
     9121 ggctcatcaa gaaaaatcac atctggggag ccaacgagac tcatcgcaat atccagtcgt
     9181 cttgtcattc cacctgaata agtgtctgca cgccgatccg cagctttttc aagtccaaaa
     9241 cgtgccaata agtcatctgc cgtttgtgct ggattctttt caccacgtaa cttagcaatg
     9301 agtaaaatat tttctcgtcc tgttaaaagt ccatctactg ccgcaaattg tccggtaaga
     9361 ctaatatgtt tccgtacttt ttccggctcc gttttcacat caaaactaga aactgtagca
     9421 agtccattat ccgcttttaa aagagtcgct aaaatttgga tggttgtcgt cttgcccgca
     9481 ccgtttgagc ctagtaatgc aaaaatttcg ccatgtttta cttcaaaatc cacacctttc
     9541 aagacttctg ttttcttaaa tgacttttcc aaacccgtgg ctttaatcat cacttctttc
     9601 atttgaatac aaccttcttt ccatttttta ttaaaactcc actactcagt aatacaggta
     9661 ttctgtatca cttattacta ctacatagta acaccgagtt gctatcatgt caataaaaaa
     9721 gtcattttct ttttattaat cagaaatgac ttttgatttt gtacataaaa aaaccgtccg
     9781 ctgaacggac ggtttaaaat tatttcactt tataaatcca accttctgga gcttctacat
     9841 ctccaaattg aatgccacat agttcatcga ataaacgctt cgttactggc cccacttctg
     9901 tttcactatg gaatacatgg aaatcatctt tggtttgaat accaccaatt ggtgtaataa
     9961 ccgctgccgt tccacatgct ccagcttctt taaactcatc taatttatca atatatacat
    10021 caccttctaa tgcttctaaa cctagacgat gctctgccaa ataaagtaac gaatacttcg
    10081 tgatacttgg caaaatagaa ggagaatacg gcgtaacaaa tttatcatct tttgtaatac
    10141 caaagaaatt agcagaacca acttcttcta tttttgtatg agtagctgga tctaaataaa
    10201 tacaatcacc aaaattgcgt tcttttgcag cctggcctgg aagtaaactt gcagcatagt
    10261 ttccgcctac ttttgcggca cccgtaccat ttggagcagc acggtcaaaa tcggaaacaa
    10321 taaagttagt tggcgccatt ccacctttga agtaagggcc gactggtgaa cagaaaacag
    10381 agaaaatata ctctggggct gcatgaacac caatattgtc acctacacca ataacaaatg
    10441 gacgtaaata aagtgttgca cctgttccat acggcggtac aaattcttca ttggcacgaa
    10501 caacttgcat aacagcatca ataaattttt cagttgggat gtgaggcatt aataaacgct
    10561 cacagctttt ttgaatacga gcagcattcc gatctgggcg gaaaagatta attgaaccgt
    10621 ccttacaacg atatgctttt aaaccttcaa aacattgttg tccgtaatga agcgctgttg
    10681 aaccctcact aatatgtagc gtattatctt ctgttagcgt accttcatcc cattccccgt
    10741 ctttccaata agaaatgtaa cgcttatccg ttttaatata actaaatcct aaattactcc
    10801 agtcaatatc tttactcatt caaaatcccc actttctatc attaaaacag aattattgta
    10861 tgtttcagta tagcatatta aatagcatta ttgcagtgat gtctcgtgaa aaagaaattt
    10921 ttttcaaata aataggcaaa atgttctttc ttttaacgta attcatgcta aaatagagta
    10981 acttttcaaa aaacaatccc ctatgaagga atgatttcaa gaaaggagag aatgaaaatg
    11041 acagctcaca aaatgttaga tgagaaattt tatagtaaat cgctaggaga ggaacttgat
    11101 ttaattatct gcttaccacc tgatttttct ccactataca aatatccact tttcattgta
    11161 caagatggta aagattattt tcagtttggc aaacttgcgc gtcactccga agaattagcg
    11221 ctaaatgagc agattcaaaa agccattttc attggtatcc catacaaaac tgttatggat
    11281 cgtcgcgaaa aatatcatcc ggacggtaaa caaaacgatg catatatcag atttttagca
    11341 tttgaactcg ttccttatct tgaagaacgc tttccttctt tccaaatgcc tactagtaga
    11401 ttcctgatgg gagattcact cggggcatcc gtttctttaa aggcagctct tctttttccc
    11461 tttacatttg gtaatgtgat tttacattcc ccctatgtgg atgacacaat ccttacactt
    11521 gcagaaaaag tagacccttc aaaagtgaaa atcttccata ttatcggtga ccgagaaact
    11581 gcagtcgaaa catccggaaa tgaagtgctc gatttcctat caccaaataa atctttagag
    11641 caaattttaa ccactcgcgg atttgattat tatttccatg tatttaacgg tgatcatcgc
    11701 tggaaatact ggcagccatt tatcaaagat tctttacaat ttatgctacc agtgaataca
    11761 tttgatttag aaagcatgcg cgcataagaa aggacggaaa caacttgacc gtaaagaaag
    11821 taacagatga tattggcaaa caagccgcac ttaaaattag aaatgatgtt tttgtcgttg
    11881 agcaacatgt tgatccagca ttagaatggg atgaattcga tgaaatagat tctgttgtaa
    11941 tgtttgttga ttatgcagaa gatggcacac cgcttgcaac cggtagattc cgcgaaaagg
    12001 atggttatgg taaagtcgaa cgcatctgta cccagaaaat agctcgcggc actgggagcg
    12061 gccggagaat catggaagcc attgaatccg aagctaagtc tcgtggctta acaaccttaa
    12121 aattaggagc ccaagtaact gctattccct tctatgaaaa attgggatac gaaacttgct
    12181 cgggattgtt ccttgatgct ggaattgaac ataaagaaat gaaaaaacat taacatagga
    12241 aatttaataa aaatagttat ttcttttata tagaagaaat aactattttt ttattagctc
    12301 tatttcgcca tttgccttcg cacaaacaat tatatccaca taatgaagaa ataatccatg
    12361 ctccacaatc cctggaattt gcgctaattt ttcttgccac atttctgcat ccctaaaagt
    12421 ttgatttact atatccaaaa tatagttccc gttatttgtc acatagattt ctcctgaaga
    12481 ttgtctccgt aaaattgttt gaacatgctc tttttcaagt gttctctcaa tttgcttcca
    12541 accaaaaggt attacttcta taggcaaagg aaacttccct aagtttctta caagcttctc
    12601 ctcactgaca acccaaatgt ttttcaaact cgcacttgct accatttttt cacgtaatag
    12661 tgctcctcct ccacctttta ttccttgaaa atccgtatca atttcatcag caccatcaat
    12721 agtaatatct atttccgcta cgtcatttag cgatttcaaa ggtattccta aattttgtgc
    12781 ttgtttgctt gtttcttcag aagttgccac ccctgtaata tgcaaaccat tatttaccat
    12841 ttctccaagc ttttcaatcg tgtaatagac tgtactgccc gttccaaggc ccacaaccat
    12901 tccatcttta atccactcac aagccttttc tcctgctatc ttcttttgat taatcatatt
    12961 ccaacctctt ttctagcatt aaaacatt
//
LOCUS       DASDYK010000082        12958 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.082, whole genome shotgun sequence.
ACCESSION   DASDYK010000082 DASDYK010000000
VERSION     DASDYK010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12958)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12958)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12958
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.082"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..1540)
                     /locus_tag="U0308_002121"
     CDS             complement(<1..1540)
                     /locus_tag="U0308_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEM2317082.1"
                     /translation="MSSKLMRGTAVLTAGTLLSKILGILYVIPFYWIAGGEQATILYQ
                     YGYVPYQIFLNIATAGVPLAVAKYISKYNSLNEYALSQRLYRSSTYLMIFTGIVSFLI
                     MYIFAPILAGMQEVSGGTSIEDITTVIRAVSFALLIIPVMSLLRGYFQGFHSMGPSAV
                     SQVIEQIARIVFLLASTYIVLHLIGGSLVTAMSLATFAAFVGAFFSLICLIWYYRKRK
                     PGIQKMIAGSDNKLRVSTFHLLKEISISAVPFIIVGMAMSLYQQIDLFTFARVLTYDG
                     MDGKTAEDLLSIFNFSVQKIIMIPGTLALAFSMTLVPLVAASFHKGRIREVHHHLTAV
                     FQVLLFLVVPACLGIALLADPLYTIFYGYNADGSMLLQFFAPFAIFFSLFSVTAAILQ
                     GIDEQRYTVLSLLLGLLTKSVLQMPLILLLGAKGGALATGLGYIVSVVFTVFIIKKYA
                     KYSFKYLFRRLILILGISAVMLLSVWLIYHGLILFLNPHARLTALVIVFVSAGFGAYI
                     YAFLA"
     gene            complement(1625..2062)
                     /locus_tag="U0308_002122"
     CDS             complement(1625..2062)
                     /locus_tag="U0308_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317083.1"
                     /translation="MSVEVKPEHARMLNNTKNVTLGIAIVSTIQAVLSAVSIVGLFAL
                     QQRKEVLANAHATAVVQNTIMTTTIMAVICIAFTIMLFLSFNKLRKGIIITPLVYYLY
                     AAFTILGVILSMINSGVNFVSLILPAVLLALSVTCILNLRRMR"
     gene            complement(2133..2906)
                     /locus_tag="U0308_002123"
     CDS             complement(2133..2906)
                     /locus_tag="U0308_002123"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEM2317084.1"
                     /translation="MTKTLTNKLAKKDHAAVVTYIMGGDGGLDNLEEQLLFLEKSGVS
                     AIEIGIPFSDPVADGPIIQLAGLRALKEQVSLEAILNKLARSKVQIPLIIMSYINPIF
                     HLGIPKFVELVQKTPVKGLIIPDLPYEHQTLITPELQGTDIALIPLVSLTSPKERLEE
                     IAKQAEGFIYAVTVNGTTGVRSEFDAHIDNHLAYLKSISPVPVLAGFGVSSIEHVEKF
                     AHVCDGVIIGSKVVQMLHEEKTAELGAFLQKAAEVRIEN"
     gene            complement(2899..4101)
                     /gene="trpB"
                     /locus_tag="U0308_002124"
     CDS             complement(2899..4101)
                     /gene="trpB"
                     /locus_tag="U0308_002124"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEM2317085.1"
                     /translation="MTYQAPDENGFYGKFGGRFVPETLMKAVKELDEAYRASKTDPAF
                     QKELNYYLKEYVGRETPLYFAEQLTAHAGGAKIYLKREDLNHTGAHKINNTIGQALLA
                     RQMGKQKVVAETGAGQHGVATATVAALFNMECTIFMGEEDVKRQSLNVFRMELLGAKV
                     VSVKAGSRTLKDAVNEALRFWVANVEDTHYIMGSVLGPHPFPEIVRDYQSVIGIEARK
                     QHLEKEGKLPDAIVACVGGGSNAMGLFYPFVDDVSVQMHGVEAAGHGLETEFHAATIS
                     KGEIGILHGAMMDVLQDENGQILEAFSISAGLDYPGIGPEHSFFRDLGRAAYHSVTDD
                     EAVEAFQLLCRTEGIIPALESSHAISYAVKLASQMRPEESMVVCLSGRGDKDVNQLKE
                     RLEGQIND"
     gene            complement(4104..4712)
                     /locus_tag="U0308_002125"
     CDS             complement(4104..4712)
                     /locus_tag="U0308_002125"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEM2317086.1"
                     /translation="MIVKICGLKKAVDVAAAVDNGADMIGFVFAKSKRQVTVEKAHEL
                     AKNIPADVKKVGVFVNPTEEELTAAIKGVPLDIVQLHGQEPAKQANRTDAKVIKAFPV
                     KDGKLPTNINDYPNAYILLDAPAEEYEGGSGKTFDWDKINRDMLTKNKLIIAGGLNAQ
                     NVQEAIKRFEPYAVDISSGVETNGEKDPEKIKCFIKTAKGVE"
     gene            complement(4709..5467)
                     /gene="trpC"
                     /locus_tag="U0308_002126"
     CDS             complement(4709..5467)
                     /gene="trpC"
                     /locus_tag="U0308_002126"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEM2317087.1"
                     /translation="MTFLEEILAQKAVEVADMPLEKVAEKRKTYSFYEFLKANTSTMQ
                     LIAEVKRASPSKGEINIGVNPVLQAKSYQAAGAGMISVLTDPVFFKGSIEDLREVAKN
                     VEIPVLCKDFIISEKQLIRARNAGATVVLLIISALTEEMLIALFEQALALDLEVLVEV
                     HDQKELAVAQKIGAKLIGVNNRNLHTFEVDIAVSERLASDFSSDACFISESGFRTAED
                     VARVSQKYNAVLVGEALMREATPEAAAKSLKVTR"
     gene            complement(5464..6483)
                     /gene="trpD"
                     /locus_tag="U0308_002127"
     CDS             complement(5464..6483)
                     /gene="trpD"
                     /locus_tag="U0308_002127"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEM2317088.1"
                     /translation="MEILLQKVYDQENLSKEEMTMIATEIFEGRLSKTKIAAFLMALK
                     VKGETAEEMAGIAQAMQRVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAG
                     IPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGIAFLFAPHVHPNMKY
                     VMDVRKELGTPTIFNLIGPLTNPVHLETQLMGIYRRDLLEQTAEVLGQLGRKRAVVLN
                     GAGFMDEASLAGENHYALYENGEVHLYTLRPEDVGLTSYPLEAITGGEAKENAAILRS
                     VLDGEPGAYLDTVLLNAGFGLFANGKVTTVQEGVDLARDLIRSGLAKQKLADLITYQK
                     EVLAK"
     gene            complement(6455..7060)
                     /locus_tag="U0308_002128"
     CDS             complement(6455..7060)
                     /locus_tag="U0308_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEM2317089.1"
                     /translation="MILLIDNYDSFTFNLEQYLAEFSEVVVKRNDATDLMEMAALADG
                     IVLSPGPGKPSDAGLLEEVVAKFAKEKPLLGICLGHQAIGEVFGGDVKRAAKIRHGKV
                     STMRQTAGAIFANLPEEMPVMRYHSLIVDKNTLPQVLEVLAVATDDAEVMAMKVKDYP
                     VYGLQFHPESIGTNDGKQMMENFIHIVEGARENGNLTTKSI"
     gene            complement(7057..8421)
                     /gene="trpE"
                     /locus_tag="U0308_002129"
     CDS             complement(7057..8421)
                     /gene="trpE"
                     /locus_tag="U0308_002129"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEM2317090.1"
                     /translation="MRKTKKIDADTLTAILAFQRLSGTGKSLLEGAAKDAEAGRYSII
                     AINPVHEIKVYQHDYYIDGIHQVVADPLKEIELFIEKAKEDEADLPLDSGAIGYVGYD
                     VIALYENLGEIPVETRDMPDIRFYVYESFVIMDHQAEELILVQDNCYSGRSEAELDKA
                     LELMFTELTTPKKEEHKAVHVPKMTYKSNYTKEEYMGLVKKAKTYIQEGDFFQIVLSQ
                     RLEADFTVTPFDYYRKLRLLNPSPYLYFIDFGDTVLIGSSPESLIKTKGRTVITNPIA
                     GTRRRGATKQEDELLASELLSDEKELAEHRMLVDLGRNDIGKIAETGSVHVPVYLTIE
                     RYRFLMHLVSVVEGTLKPGLTAMDALRSTLPAGTVSGAPKIRAMERIYEWENVKRGPY
                     AGAVGYLTKNGDSDFALSIRTMVLHNGKAYVQAGAGIVYDSDPESEYLETLQKAKALL
                     EVGE"
     misc_binding    complement(8489..8715)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     misc_binding    complement(8764..9005)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            9507..12107
                     /gene="lap"
                     /locus_tag="U0308_002130"
     CDS             9507..12107
                     /gene="lap"
                     /locus_tag="U0308_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion-mediating acetaldehyde/alcohol
                     dehydrogenase LAP"
                     /protein_id="HEM2317091.1"
                     /translation="MAIKENAAQEVLEVQKVIDRLADNGQKALKAFESYNQEQVDNIV
                     HAMALAGLDQHMPLAKLAVEETGRGLYEDKCIKNIFATEYIWNNIKNNKTVGVINEDV
                     QTGVIEIAEPVGVVAGVTPVTNPTSTTLFKAIIAIKTRNPIIFAFHPSAQRCSSAAAK
                     VVYDAAIAAGAPEHCIQWVEKPSLEATKQLMNHDKVALVLATGGAGMVKSAYSTGKPA
                     LGVGPGNVPAYIDKTAKIKRSVNDIILSKSFDQGMICASEQAVIVDKEVAKEVKAEME
                     ANKCYFVKGAEFKKLESYVINPEKGTLNPDVVGKSPAWIANQAGFKVPEDTKILVAEI
                     KGVGDKYPLSHEKLSPVLAFIEAANQAEAFDRCEEMLVYGGLGHSAVIHSTDKEVQKA
                     FGIRMKACRIIVNAPSAQGGIGDIYNGFIPSLTLGCGSYGKNSVSQNVSATNLLNVKR
                     IADRRNNMQWFKLPPKIFFEKYSTQYLQKMEGVERVFIVTDPGMVQFKYVDVVIEHLK
                     KRGNDVAYQVFADVEPDPSDVTVYKGAELMKDFKPDTIIALGGGSAMDAAKGMWLFYE
                     HPEASFFGLKQKFLDIRKRTFKYPKLGGKAKFVAIPTTSGTGSEVTPFAVITDKENNI
                     KYPLADYELTPDVAIVDAQYVTTVPAHITADTGMDVLTHAIESYVSVMASDYTRGLSI
                     RAIELVFENLRESVLTGDPDAREKMHNASALAGMAFANAFLGINHSLAHKIGPEFHIP
                     HGRANAILMPHVIRYNALKPKKHALFPRYESFRADEDYARISRIIGFPAATTEEGVKS
                     LVDEIIKLGKDVGIDMSLKGQNVAKKDLDAVVDTLADRAFMDQCTTANPKQPLVSELK
                     EIYLEAYKGV"
     gene            12230..12658
                     /locus_tag="U0308_002131"
     CDS             12230..12658
                     /locus_tag="U0308_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/extradiol
                     dioxygenase family protein"
                     /protein_id="HEM2317092.1"
                     /translation="MIQATVPYFTFDGEATEALDFYKKVFQAEITQMRYFHELEGFSG
                     DKKQGERILHARLTKDEKDLFYFSDTLEGETDAGNRLALAVNFSSEADFVHAFVLLSK
                     TGTIEIPIQNTFWDAKYAKVIDHYSIDWHLNLENESTTKV"
     gene            12742..>12958
                     /locus_tag="U0308_002132"
     CDS             12742..>12958
                     /locus_tag="U0308_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2317093.1"
                     /translation="MTETVLKLEHVTKKIGQKNIVHDISFDIHKGEVFGLLGPNGAGK
                     TTIIRSIVGLIRRSEGTVFINGKNVDTE"
BASE COUNT         4057 a         2845 c         2178 g         3878 t
ORIGIN      
        1 cagccaaaaa cgcataaata taggcaccaa agccggctga aacaaaaaca ataactagtg
       61 ctgttaatct tgcatgtgga tttaaaaata aaatcaagcc atgataaatc aaccagacac
      121 taagaagcat caccgcacta attcctaaaa taagtataag ccgtctaaat aaatatttaa
      181 acgagtactt cgcatatttt ttaataataa aaacggtgaa tactacggaa acaatataac
      241 caagtcccgt agctaatgcc ccaccttttg cccctaaaag caaaattaat ggcatttgca
      301 acactgattt tgtcagtaaa ccaagtaaga gactaagaac agtgtaccgt tgttcatcaa
      361 ttccttgcaa aatcgcggct gttacactaa ataacgagaa gaatatggca aatggcgcaa
      421 aaaactgaag taacatcgaa ccatctgcat tataaccata aaaaatggtg taaagcggat
      481 ccgctaaaag ggcaattcct aaacaagctg gcacaactaa aaatagtaac acttggaaaa
      541 cagccgtcaa atgatgatga acttcccgaa ttcgcccttt atggaaagat gccgccacta
      601 aaggcacaag tgtcatcgaa aatgccaagg ctaaagttcc cggtatcata ataatttttt
      661 gaacggaaaa gttgaaaatt gaaagcaaat cttccgctgt tttcccgtcc ataccatcgt
      721 aggttaaaac acgagcaaac gtaaataaat caatttgctg ataaagggac atcgccattc
      781 caacaataat aaatggcacc gcagatatcg aaatttcttt taatagatga aaagtcgaaa
      841 cgcgcaactt gttgtcactg ccagcaatca ttttttgaat acccggcttc cgtttccggt
      901 aataccaaat gagacaaatc aagctgaaaa acgcaccaac aaaagccgca aaagtcgcta
      961 aactcatcgc tgtaacaaga cttccaccaa ttaaatgtaa gacaatatac gtactagcaa
     1021 gtaaaaatac aattctcgct atttgttcaa ttacttgtga cacggcagaa ggtcccatcg
     1081 aatgaaatcc ttggaaataa ccacgaagta aactcattac aggaataata agtaatgcaa
     1141 aacttactgc gcgaataacc gtcgtaatat cttcaatact cgttccgcca ctaacctctt
     1201 gcatccccgc gagtatcggg gcaaaaatat acattattaa aaaactaaca atccctgtga
     1261 atatcattaa atacgtactt gatctataca atcgctgact taaagcatat tcatttaacg
     1321 aattatactt cgagatatat ttggcaactg ctaaaggtac tccagctgtc gcgatattta
     1381 agaaaatttg gtaagggaca tatccatatt gatagagaat cgttgcttgt tccccgccgg
     1441 caatccagta aaatggaata acatataaaa tccctaagat ttttgaaagc aatgttccag
     1501 cggtaagcac agccgttcct cgcattaatt ttgaactcat aatttctgtt acctcgattg
     1561 attttttctt ttaagtctgt ctgttaaatc gggttatgta aaaatcattc ttacactact
     1621 acttttatcg cattcttcta agatttaaaa tacaagttac acttaaagca agtagtactg
     1681 ctggtaaaat aagcgaaaca aagttcacac cactattaat cattgacaaa ataacaccaa
     1741 gaatagtaaa tgcagcgtat aaataatata caagcggcgt aattataata ccttttctaa
     1801 gtttgttaaa agaaagaaat aacataatcg taaacgcaat acaaataact gccataatgg
     1861 tagtcgtcat aatcgtattt tgaacgaccg cagtggcatg tgcattagca agtacttctt
     1921 ttctttgttg taacgcaaaa agacctacaa tagagactgc acttaatact gcttgaatag
     1981 tcgatacaat cgctattcca agtgtgacat ttttcgtgtt attgagcatt ctcgcatgct
     2041 ctggtttaac ttcaacagac atccttacaa ctcctcttta acattctata caccagactt
     2101 taccatattt aaagagaaat tgtaagtagt aattagtttt cgattcgaac ttctgcggcc
     2161 ttttgtaaaa acgctcctag ctctgccgtt ttttcttcat gtaacatttg cacgacttta
     2221 ctaccgatta ttacaccatc acatacatgc gcaaattttt ccacatgttc aatagaagaa
     2281 acaccaaaac ctgcgagaac tggaacaggg ctaatgcttt ttaaataagc taaatggtta
     2341 tcaatatggg catcaaattc actcctcaca ccggtagttc cgttaactgt tactgcataa
     2401 ataaaccctt ctgcctgttt cgcaatttct tcgaggcgct ctttcggact tgtcaatgaa
     2461 acaagcggaa taagtgcgat atctgtccct tgaagttctg gcgtaatcag tgtttggtgc
     2521 tcataaggta aatcaggaat aataagccct ttcaccggcg ttttctgcac caattcaaca
     2581 aatttcggga tacctaaatg aaaaatcgga ttaatataac tcataataat tagcggaatt
     2641 tgcactttac tcctagccaa tttatttaaa atggcttcta aactcacttg ctcctttaaa
     2701 gcacgtaacc cagcaagttg aataatcgga ccgtcggcaa ccggatcaga aaaaggaata
     2761 ccaatttcaa tcgcgcttac accagatttt tcgagaaaca ataactgttc ttctaaatta
     2821 tctaagccac catcgccacc cataatgtaa gtaactacgg cagcatgatc ttttttcgct
     2881 agtttattcg ttaatgtttt agtcatttat ttgtccctcc aagcgttcct ttagttgatt
     2941 aacatcttta tctccgcgac cagataaaca aacgaccata ctttcttctg gacgcatttg
     3001 gcttgcaagt ttgactgcat aactaatcgc gtgcgagctt tcgagtgcag gaatgattcc
     3061 ttccgtacga cataaaagtt gaaatgcttc aacggcttca tcatcggtaa cagaatggta
     3121 cgctgcacga cctaaatcac ggaaaaagct atgctccgga ccaatacctg gataatctaa
     3181 gccagctgaa atcgaaaatg cttccaaaat ttgtccattc tcatcttgta aaacgtccat
     3241 catcgctccg tgtaaaatcc ctatttctcc tttggaaata gtcgctgcat ggaattcagt
     3301 ttctaaaccg tgtcccgctg cttccacacc gtgcatttga acagaaacat catctacaaa
     3361 tggataaaat aaccccatcg cattactccc gcctccaaca caagcaacaa ttgcatcagg
     3421 aagcttacct tctttttcca agtgttgttt gcgtgcttct attcctatca cactttggta
     3481 atcacgaaca atttctggaa atggatgcgg tccaagaacg gatcccataa tgtaatgcgt
     3541 gtcttccaca ttagcaaccc agaatctgag cgcctcattt actgcgtctt ttaatgttct
     3601 gcttcctgct ttcacgctca ctacttttgc accaagaagt tccattctaa acacattgag
     3661 tgattggcgt ttcacatctt cttctcccat aaaaatagta cattccatat taaaaagtgc
     3721 tgcaacagtt gcagtcgcca ccccgtgttg tcctgcgcca gtttctgcca ctactttttg
     3781 tttacccatt tgacgtgcga gtaaggcttg cccaatagta ttattgattt tatgtgcgcc
     3841 agtatgattt aaatcttcgc gttttaaata aatttttgct ccgcccgcat gtgctgttaa
     3901 ttgttcagca aaataaagtg gtgtttctcg gcccacatat tcttttaaat aatagtttaa
     3961 ttctttttga aaagcaggat ctgttttgga agcccggtac gcctcgtcta attctttcac
     4021 tgctttcatt aatgtttctg gtacaaatct gccgccaaat tttccgtaaa agccattttc
     4081 gtcaggtgct tgataagtca ttattattcc actccttttg ctgttttaat gaagcattta
     4141 attttctccg gatctttttc tccgtttgtt tctacgccag aggaaatatc tactgcatat
     4201 ggttcaaagc gtttaatggc ttcttgtaca ttctgagcat ttaatccgcc agctataatt
     4261 aatttgtttt ttgtaagcat gtctctattt attttatccc aatcaaatgt ttttccgctg
     4321 ccgccttcat attcctctgc tggtgcatcg agtaaaatat aagcgtttgg atagtcattt
     4381 atattggtag gaagtttccc gtctttcaca ggaaaagctt tgattacttt tgcatctgtg
     4441 cgatttgctt gttttgcggg ttcttgtccg tgaagttgaa caatgtctaa tggcacacct
     4501 ttgattgctg ccgttaactc ttcttcagta ggattaacga ataccccgac ttttttgacg
     4561 tcagcgggaa tatttttggc taattcatgt gccttttcca ccgtaacttg acgtttactt
     4621 tttgcgaaaa cgaagccaat catatctgcg ccattatcga ccgcagccgc tacatctact
     4681 gcttttttca atccacaaat ttttacaatc atcgtgtcac cttcaaactt ttcgccgctg
     4741 cttctggagt cgcttctcgc attagcgctt ctccaacaag cactgcatta tatttttgac
     4801 taacacgagc cacatcttca gctgttcgaa aacctgattc acttatgaaa caagcatccg
     4861 acgaaaaatc gctcgccagt ctttcactta ctgcaatatc cacttcaaat gtatgcaaat
     4921 tacggttgtt cacaccaatg agtttagctc caattttttg agcaacagct aattctttct
     4981 ggtcatgtac ttccactaac acttccaaat caagcgccag agcttgttca aacagagcaa
     5041 ttagcatctc ttctgtaagt gccgaaataa ttagcaatac aaccgttgct cccgcatttc
     5101 gagcacgaat caattgtttt tcactaataa taaaatcttt acaaagtaca ggaatttcga
     5161 catttttcgc tacttctcgc aaatcttcaa tcgagccttt gaaaaaaaca ggatctgtca
     5221 aaacagaaat cattcccgca cccgcagctt gataagactt ggcttgcaga accggattca
     5281 cgcctatatt gatttcccct ttagaaggag aggcgcgttt tacttctgca ataagttgca
     5341 tcgtgctggt atttgctttt aaaaattcat aaaacgaata agttttccgt ttttcggcta
     5401 ctttttctaa gggcatgtct gcaacttcta ctgctttttg cgctaaaatt tcttctaaaa
     5461 atgtcatttt gctagcacct ctttttgata agtaattaaa tctgccaatt tttgtttggc
     5521 taaaccactt ctaattaaat ctcttgctaa atccacgcct tcttgtaccg ttgtcacttt
     5581 gccatttgca aataaaccaa atccggcatt taaaagcact gtatctaagt aagctcctgg
     5641 ttctccgtca agcacactac gcaaaattgc tgcattttct ttagcttctc cgcctgtaat
     5701 tgcttcgaga ggatagctag ttaaaccaac atcttccgga cgcagtgtat ataagtgaac
     5761 ttcaccattt tcatataacg cataatgatt ttctccagcc agagaagctt catccataaa
     5821 accagcgcca tttaaaacaa ctgcgcgttt tcgtccgagc tggccgagta cttccgctgt
     5881 ttgctctaac aaatcacgac gataaattcc cattaattgc gtttctaaat ggaccggatt
     5941 tgtgagtggg ccaatcaaat taaatatcgt tggcgttcca agttcttttc gaacatccat
     6001 aacgtacttc atattcgggt gaacatgtgg cgcgaacaaa aaggcaattc cgactttttc
     6061 gagtaaataa gtcatatctt ctggtcgcat attaatatca atccctaatt cctgacaaac
     6121 atcagcacta cctgaacgac tagaaatact tctattccca tgtttcgcaa ccggaatccc
     6181 cgcagccgca agaacaaaag ccgacgtagt actaatatta aaactattgg atttatctcc
     6241 acctgttccg caattatcca tcgctgtccc ggctggaaaa gcgacttgaa tagccactcg
     6301 ttgcatcgcc tgcgcgattc ccgccatttc ttctgccgtt tctcctttca ctttgagcgc
     6361 cattaaaaaa gcagctattt tcgttttcga aagtcgtcct tcaaaaattt ctgttgcgat
     6421 cattgtcatt tcttctttgg ataaattttc ttggtcatat actttttgta gtaagatttc
     6481 cattttctcg cgctccttcc actatatgaa taaagttttc catcatttgt tttccatcat
     6541 tcgtaccaat tgattcagga tgaaattgca aaccgtaaac cggataatct tttactttca
     6601 ttgccatcac ttccgcatcg tccgtcgcta ctgctaacac ttccaaaact tgtggcaacg
     6661 tgtttttatc tactattaaa gagtgataac gcatcacagg catttcttcc ggtaaattag
     6721 caaagattgc tccagcggtt tgccgcatag tagaaacttt cccgtggcgg attttcgccg
     6781 ctctttttac gtctccgccg aatacctcac caatcgcctg atgacctaaa caaattccaa
     6841 gcaaaggctt ttctttcgca aattttgcaa ctacttcttc taaaagacca gcatcacttg
     6901 gttttcctgg tcccggtgaa agaactatcc catcagctaa agccgccatt tccattaaat
     6961 cagtcgcatc attccgtttc acaaccactt cactaaattc tgctaaatac tgttctaaat
     7021 taaatgtaaa agaatcgtaa ttatcaatta atagaatcat tctcccacct ccaaaagtgc
     7081 ctttgctttt tgtaatgttt ctaagtattc gctttctgga tcggaatcat agacaattcc
     7141 tgcaccagct tgaacataag cttttccgtt atgaagtacc attgttctaa tcgaaagcgc
     7201 gaaatccgaa tcaccatttt tagttaaata accaaccgca ccagcatatg ggccacgttt
     7261 tacattttcc cattcataga ttcgctccat ggctcttatt ttcggtgctc cgctaactgt
     7321 accagccgga agcgtcgacc gaagagcatc cattgcagta agtccgggtt ttaaggttcc
     7381 ttctactact gaaactaaat gcattaagaa acggtatctt tcaatagtaa ggtaaacagg
     7441 cacatgcact gatcccgttt cggcgatttt cccaatatca tttcgtccaa gatctactaa
     7501 cattcggtgc tctgctaatt ctttttcatc cgacaacaat tccgaagcga gtagttcgtc
     7561 ttcttgtttc gttgccccgc gccgtcttgt tcctgcaata ggattcgtaa ttaccgtccg
     7621 cccttttgtt ttgatcaaac tttctgggga agatccaatc aacaccgtat ccccaaaatc
     7681 aatgaaataa agataaggag aaggatttaa taaacgtaat ttccgataat aatcaaatgg
     7741 tgtcacggtg aaatctgctt ctagtcgttg cgagagaaca atttgaaaga agtcaccctc
     7801 ttggatatag gtttttgctt ttttcactaa ccccatgtac tcctctttcg tgtagttact
     7861 cttgtatgtc attttgggaa catggacagc cttgtgctct tcctttttcg gcgttgtaag
     7921 ttcagtaaac attaattcaa gcgccttatc tagttccgcc tcacttcttc ccgaatagca
     7981 attatcttgc actaaaataa gttcttccgc ctgatgatcc ataatcacaa aactttcata
     8041 tacataaaaa cgaatatctg gcatatcccg agtttctact ggaatttcgc ctaaattctc
     8101 ataaagcgca atgacatcat aaccaacata accaattgca cctgaatcaa gcggtaaatc
     8161 tgcttcatct tcttttgctt tttcgataaa taattcaatt tcttttaaag gatctgcgac
     8221 aacttgatgt ataccgtcga tataataatc atgttgatat actttaattt catggactgg
     8281 attaatggca ataatcgaat aacgtccagc ctccgcatct ttcgccgccc cctctagcaa
     8341 actttttcct gtacctgaaa gtctttgaaa cgccagaata gccgttagtg tgtcagcatc
     8401 tatttttttc gtttttctca tcttaatcat cccttcttct ctactaaaat aaaaaaagtc
     8461 ctctgaaaaa gcgcaaaatt atgctttttc agaggacgag ttatcgcggt gccacctcat
     8521 tttagggaat tctccctatc tcagtactgc aatatttgca gtcgctctat aacgggagca
     8581 cccgttcacc cctacttaat ttcaaggtat cacgcacaag gcccattcct aattcatcta
     8641 tttattagct cccaccaaac gctaactctc tttaaaaatc gatgaaaaag tactattctt
     8701 gtttcatgtt ttcgttttat aaaattaaaa aagggcctct ctccaagcct agcaaatata
     8761 ctagacaagg acgagagacc cgtggtacca ccttgattaa ctgtaaaaac agttcactta
     8821 atccatccaa attccgaatg ggtgccttgt gtaacgataa ggcctaatcg ctgtatccta
     8881 ctaagaaaat cctttcagat cagagctcag aagtccattc acatcatgtc tgctactgac
     8941 tttcaccaac cgtcagctct ctagaaactt tcatcatgct acttactctt cttcaatgct
     9001 atcatttttt acttgttttc atcttacata agaaaatcac gaaagtcaag aaaataaaac
     9061 tactttatac taaaaaggtt ccaaaacgat aattaataaa caagtaagaa aaaagaacta
     9121 tctccctata atatatttca ccccagaaaa agtatgctat tttctctatt ataataaata
     9181 tcacctccct taaaacactt ataaaatata ggttttcaaa tgataatcag cttaaattcc
     9241 aatgataaaa acactcatat aaaccatgcc taattaacta aaaaaagctt ttccgaaagg
     9301 acttttcaac catctttgtc aatttgtgaa gtttttcacg tgaaacactg gacaaacttt
     9361 tattgatgga ttatactaac ggtgtaatca aataaaacaa aagaatacgg caaagcaaca
     9421 agctaaattt ttttggatta tcagggacgt taaaagtcta ctatggacat tttaagtccc
     9481 gaacaaatat taggaggttc tggaaaatgg caattaaaga aaatgcggcc caagaagtat
     9541 tagaagttca aaaagtgatt gacagattag cagacaatgg acaaaaagca ttgaaagcat
     9601 ttgaaagtta caatcaagaa caagtagaca atatcgttca cgcaatggca cttgccggac
     9661 ttgaccaaca tatgcccctt gcaaaattag cagtagaaga aactggacgt ggattatacg
     9721 aagataaatg tattaaaaac atcttcgcga cagaatatat ttggaacaac attaaaaaca
     9781 acaaaacagt aggcgttatt aatgaagatg tacaaactgg tgtgattgaa attgctgaac
     9841 cagttggagt tgttgccggg gttacacctg taactaaccc aacatccact actcttttca
     9901 aagcaattat cgctatcaaa acacgtaacc caatcatctt tgctttccat ccaagtgcac
     9961 agcgttgttc atctgcagca gcgaaagttg tatacgatgc agcaattgca gctggagcac
    10021 cagaacattg tattcaatgg gtagaaaaac cttccctaga agcaacgaaa caattaatga
    10081 atcacgataa agtagcactt gtacttgcaa ctggtggtgc tggaatggtt aaatcagcat
    10141 actctactgg taaacctgca ctaggtgttg gaccaggtaa cgtaccagct tacattgaca
    10201 aaacagccaa aattaaacgt tctgttaatg acattattct ttctaaatct tttgaccaag
    10261 gtatgatttg tgcttctgaa caagcagtca tcgtggacaa agaagtagct aaagaagtaa
    10321 aagcagaaat ggaagcaaac aaatgctact tcgttaaagg cgctgaattc aaaaaattag
    10381 aaagctacgt aatcaatcct gaaaaaggaa cacttaaccc agatgtagtt ggtaaatccc
    10441 ctgcatggat tgcaaatcaa gctggcttca aagttccaga agatacaaaa atccttgtag
    10501 ctgaaattaa aggtgttggc gacaaatacc cactatctca cgaaaaatta agcccagttc
    10561 ttgcattcat cgaagctgct aaccaagcag aagcattcga tcgttgtgaa gaaatgttag
    10621 tatacggagg acttggacac tccgcagtta ttcactctac ggataaagaa gttcaaaaag
    10681 catttggtat tcgtatgaaa gcttgccgta tcatcgtaaa tgcaccaagc gcacaaggcg
    10741 gtatcggtga catttataac ggcttcatcc cttccctaac actaggttgt ggatcttacg
    10801 gtaaaaactc tgtatcacaa aatgtaagtg cgactaactt gctgaacgtt aaacgtatcg
    10861 cggatcggag aaataatatg caatggttca aacttccacc aaaaattttc tttgaaaaat
    10921 attccactca ataccttcaa aaaatggaag gcgttgaacg cgtatttatc gtaactgacc
    10981 caggaatggt tcaattcaaa tacgtggatg tcgtaatcga acacctgaaa aaacgtggca
    11041 acgatgtagc ttaccaagta tttgctgacg ttgaaccaga tccatctgac gtaacagttt
    11101 acaaaggtgc agaactaatg aaagacttca aacctgatac aattatcgct cttggtggtg
    11161 gttctgcaat ggatgctgcc aaaggtatgt ggttattcta tgaacaccca gaagcttcat
    11221 tcttcggctt gaaacaaaaa ttcttagata tccgtaaacg tacattcaaa tatcctaaac
    11281 ttggtggaaa agcgaaattc gttgcaattc caacaacaag tggtacaggt tctgaagtaa
    11341 ctccatttgc ggttattaca gacaaagaaa acaacattaa ataccctctt gcagactacg
    11401 aattaactcc agatgttgcg attgtcgatg cacaatatgt aactactgtt ccagcacaca
    11461 ttactgctga cactggtatg gacgttctaa ctcacgcaat tgaatcttat gtatccgtaa
    11521 tggcaagcga ttatactcgt ggattatcta tccgcgcaat cgaacttgta tttgaaaact
    11581 tacgtgaatc tgttcttact ggtgatccag atgcgcgtga aaaaatgcat aatgcttctg
    11641 ccctagctgg tatggcgttt gcaaatgcgt tcctaggaat taaccacagc ttggcacaca
    11701 aaattggacc tgaattccac attcctcacg gtcgtgcgaa tgcaatcctt atgccacatg
    11761 ttattcgtta taacgcactt aaacctaaaa aacatgcgtt attccctaga tatgaaagct
    11821 tccgtgctga tgaagattat gctcgtatct ctcgtattat cggcttccct gcagcaacta
    11881 cagaagaagg cgttaaatca cttgtagatg aaatcatcaa acttggtaaa gacgttggta
    11941 tcgacatgag tcttaaagga caaaatgttg ctaaaaaaga tttggatgca gttgtagata
    12001 cacttgcaga tcgcgcattc atggaccaat gtactactgc caaccctaaa caaccacttg
    12061 taagtgaact aaaagaaatc tacctagaag cttacaaagg tgtttgaaac tagctaactt
    12121 gtccaccatt aatatataaa gttagaagaa agcgcaagtc catcccaggg cttgcgcttt
    12181 cgctttagta ctaaaattag tataatggaa caagaatgga gttgatttaa tgatacaagc
    12241 aacggttccc tactttactt ttgacgggga ggccacagaa gcactagatt tttataaaaa
    12301 agtgtttcaa gcagaaatta cgcaaatgcg ttattttcac gagctggaag gattctcagg
    12361 agataaaaaa caaggagaac gaatcctcca tgcaagactt acgaaagacg agaaagattt
    12421 attttatttc tccgacacgc tcgaaggcga aacagacgcg ggcaatcgcc tagcacttgc
    12481 ggtgaatttt agttcggaag cagattttgt acatgccttt gtcctactat ccaaaaccgg
    12541 caccatcgaa attccgattc aaaatacatt ttgggacgca aaatacgcga aagtaatcga
    12601 tcattacagc atagattggc accttaactt agaaaatgag tctactacta aagtatgatt
    12661 ttttcccgtc ctctagccga atgtaattag aactaaaaaa tagtacaatt ttagtagtga
    12721 gagaaaaaaa ggagtgagtt catgactgag acagttttaa aattagaaca tgtcacgaaa
    12781 aaaatcggac aaaaaaatat tgtccacgat atcagctttg acatacataa aggagaagta
    12841 tttggtttac ttggcccaaa cggtgctggt aagacaacta taatccgctc tatcgttggt
    12901 ttaattcgtc gctcagaagg taccgttttt attaatggta aaaatgtcga cacagaat
//
LOCUS       DASDYK010000083        12901 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.083, whole genome shotgun sequence.
ACCESSION   DASDYK010000083 DASDYK010000000
VERSION     DASDYK010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12901)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12901)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12901
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.083"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(180..584)
                     /locus_tag="U0308_002133"
     CDS             complement(180..584)
                     /locus_tag="U0308_002133"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEM2317094.1"
                     /translation="MGSLNVSIVTPDGPVYEGVAQMVIARTKAGELGILPGHVPLVAP
                     LKIDIVRLKVESGEEWVAVNGGFMEVNGEEVNILADTAEREQDIDIDRAEKAKQRAEE
                     ELSRAKEQKVDEVMAQLALQRAINRIHAKEHN"
     gene            complement(606..2027)
                     /gene="atpD"
                     /locus_tag="U0308_002134"
     CDS             complement(606..2027)
                     /gene="atpD"
                     /locus_tag="U0308_002134"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEM2317095.1"
                     /translation="MSKGQVIQVMGPVVDVKFEGGNLPEIYNALVIEYKSDAEEAPTS
                     QLTLEVAIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNT
                     IDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGA
                     GVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEKTAMVFGQM
                     NEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG
                     YQPTLATEMGQLQERITSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERK
                     LTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAILGMDEL
                     SDEDKQSVSRARRVQFFLSQNFHVAEQFTGQKGSYVPVKETVKGFKDLLAGKYDHIPE
                     DAFRSVGRIEDVLEKAKDMGVEV"
     gene            complement(2088..2960)
                     /locus_tag="U0308_002135"
     CDS             complement(2088..2960)
                     /locus_tag="U0308_002135"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEM2317096.1"
                     /translation="MASLIDIKQRITSTRKTSQITKAMQMVSAAKLGRAESNARSYEP
                     YVSKIKDVVTHVASTGNSSDHPMLVSRPVHRTGYIVLTSDTGLAGSYNSSVIKEVFQE
                     INKKHTSSDEYAIITVGRSARDFFKARQMNVVLEVQGITDHPIFAEIKDIASNTVQMF
                     EDGVYDEVFIYYNHHINSISSELRKEQLLPLTEFHEKGKETDVDLTTYEFEPSEQEIL
                     EVLLPQYVESLIFGALLDAKAAEHAARMTAMRSATDNASDLISDLSLQYNRARQAAIT
                     QEITEIVGGAAALE"
     gene            complement(2998..4512)
                     /locus_tag="U0308_002136"
     CDS             complement(2998..4512)
                     /locus_tag="U0308_002136"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEM2317097.1"
                     /translation="MSIKAEEISSIIKQQIENYQSELKVSDVGTVTYIGDGIARAHGL
                     DNAMAGELLEFSNGVMGMAQNLETNDVGIIILGPYTEIREGDEVRRTGKIMEVPVGEA
                     LIGRVVNSLGQPVDGLGPIETTGTRPIEAVAPGVMQRQSVNEPLQTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTSVAIDTILNQADQDMICIYVAIGQKESTVRNAVETLRHHGAL
                     DYTIVVTAAASQPAPLLYLAPYAGVAMAEEFMYNGKHVLVVYDDLSKQAAAYRELSLL
                     LRRPPGREAYPGDVFYLHSRLLERAAKLNDSLGGGSITALPFVETQAGDISAYIPTNV
                     ISITDGQIFLQSDLFFSGVRPAINAGLSVSRVGGSAQIKAMKTVAGTLRLDLAAYREL
                     ESFSQFGSDLDAATRAKLERGKRTVEVLKQDLHKPLKVEKQVLILYALVHKYLDDVPV
                     HDVLRFESEMNTWFDHNHPELLEEIRTTKKLPDEAKLEAALKEFKNTFVPSEEK"
     gene            complement(4539..5078)
                     /locus_tag="U0308_002137"
     CDS             complement(4539..5078)
                     /locus_tag="U0308_002137"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEM2317098.1"
                     /translation="MSKDLEVAGRYANALFQVAQDKDLVDVFSEELTELKAALKANED
                     FVKLLENPTFTTEQKKNLASAVFEKINPTLRDFIYLLIDRSREDYLSVIADVYQKRVN
                     DLNGVADADVYSVVPLSEQELTALSRVFATKMNKTKLNIQNHIDKSLLGGVKVVIGTR
                     IYDDSLKTKLKDMERQIKA"
     gene            complement(5075..5587)
                     /gene="atpF"
                     /locus_tag="U0308_002138"
     CDS             complement(5075..5587)
                     /gene="atpF"
                     /locus_tag="U0308_002138"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEM2317099.1"
                     /translation="MLQPHLVIGSAFTFGDAFFTLFAFAILLVLIRIYAWKPLMGVMK
                     EREEHIGSEIDAAEESRAQAEQLLAEQKSVLQQARVESQTMIENAKQLGEKEREEIVK
                     TARRESERIKEEAKSDIAREKEDAISALREQVGSLSVLIASKVIEKNLDEKEQSNLIQ
                     DYIERLGDDK"
     gene            complement(5675..5893)
                     /gene="atpE"
                     /locus_tag="U0308_002139"
     CDS             complement(5675..5893)
                     /gene="atpE"
                     /locus_tag="U0308_002139"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEM2317100.1"
                     /translation="MSLGVIAAAIAVGLGALGAGIGNGLIVSKTVEGVARQPEARSML
                     QTIMFIGIGLVEALPIIAVVIAFMVLNK"
     gene            complement(5965..6681)
                     /gene="atpB"
                     /locus_tag="U0308_002140"
     CDS             complement(5965..6681)
                     /gene="atpB"
                     /locus_tag="U0308_002140"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEM2317101.1"
                     /translation="MEEEFPTISLLGIDFNLSNILMITVTCVIVLLIAIICTRNLQRR
                     PTGKQNFIEWVMDFVRGIINSNMDWKTGGRFHVLGITLLMFIFVANMLGLPFQIAIND
                     EVWWRSPTADPIVTLTLAIMVLGLTHYYGIKMRGFKHYFVGTYFSPMKFLFPLKLVEE
                     FANTLTLGLRLYGNIFAGEVLLTIIATQLAHMNIFVGVLAIIPALLWQGFSIFIGAIQ
                     AYIFTMLTMVYMSHKVSDEH"
     gene            complement(6688..7086)
                     /locus_tag="U0308_002141"
     CDS             complement(6688..7086)
                     /locus_tag="U0308_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HEM2317102.1"
                     /translation="MLESLIGMYHRHQKYMVLFIAVCLCGWFLTPYIHIFLGLKLGLI
                     VGWFNYWLLMRRTQSMTRALAENRSFYGMGMPFRMGSVLFATIIATQLPEFFHVYSMV
                     IGLGLAYAIIFLDFFVYSMYRRKKFLKREG"
     gene            complement(7280..7447)
                     /locus_tag="U0308_002142"
     CDS             complement(7280..7447)
                     /locus_tag="U0308_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008475642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317103.1"
                     /translation="MTEVLVAVKWTKIILAWQSKKQIDFEIKKISKIIGYSFMDGSDC
                     GTISNRCTYNL"
     gene            complement(7917..9056)
                     /gene="wecB"
                     /locus_tag="U0308_002143"
     CDS             complement(7917..9056)
                     /gene="wecB"
                     /locus_tag="U0308_002143"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEM2317104.1"
                     /translation="MAKIKVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQHR
                     EMLDQVLEIFDIKPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTT
                     SFAAGLATFYQQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADMHFSPTKQAKENL
                     LAEGKDPGTIFVTGNTAIDALRTTVQKDYHHPILENLGDNRLILMTAHRRENLGEPMQ
                     GMFEAVREIVESREDVELVYPMHLNPAVREKATKILGGHERIHLIEPLDAIDFHNFLR
                     KSYLVFTDSGGVQEEAPGMGVPVLVLRDTTERPEGIEAGTLKLIGTNKENLIKEALNL
                     LDNKENHDKMAHAVNPYGDGFAANRILAAIKSHFEETGRPEDFIV"
     gene            complement(9174..9803)
                     /gene="upp"
                     /locus_tag="U0308_002144"
     CDS             complement(9174..9803)
                     /gene="upp"
                     /locus_tag="U0308_002144"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEM2317105.1"
                     /translation="MANVHVINHPLVQHKLTIIRDKNTGTKAFRELVDEVATLMAYEI
                     TRDMELEDIQVETPLQTTTAKTLTGKKLGIVPILRAGLGMQDGILKLIPAAKVGHVGL
                     YRDHDTLEPVEYFVKLPSDVEERLFIVVDPMLATGGSAIMAIDCLKKRGARNMKFMCL
                     VAAPEGVKALQDAHPDVEIYVAGLDEKLDENGYIRPGLGDAGDRLFGTK"
     gene            complement(9941..11182)
                     /locus_tag="U0308_002145"
     CDS             complement(9941..11182)
                     /locus_tag="U0308_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEM2317106.1"
                     /translation="MVYLQKQDKEVFDAIKLELGRQRANIELIASENFVSEQVMEAMG
                     SVLTNKYAEGYPGKRYYGGCEFVDIVEDLARDRAKKLFGAEYANVQPHSGAQANMAVY
                     HTVLEPGDTVLGMNLSHGGHLTHGSPVNFSGVLYNFVEYGVREDTKEIDYDIVREAAL
                     KHKPKMIVAGASAYPRKIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHQNPVPYAD
                     FTTTTTHKTLRGPRGGMILAKAEWEQKLNKSIFPGIQGGPLMHVIAAKAVAFGEALQP
                     EFTAYCEQIIRNSKKLAETLQANDVAVLTGGSDNHLLLIDLKPLGLTGKAAEKVLDEV
                     GITVNKNTIPFETESPFVTSGIRVGVAAVTTRGFDEVAIEKVGVLISEVLHNLENEEV
                     LADVKARVATLTNEYPLYPSL"
     gene            complement(11318..11725)
                     /locus_tag="U0308_002146"
     CDS             complement(11318..11725)
                     /locus_tag="U0308_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight protein arginine
                     phosphatase"
                     /protein_id="HEM2317107.1"
                     /translation="MKVLFVCTGNTCRSPLAEKILQNLRPDLDVRSAGTRALDGDAIS
                     ENSRQILAQMNLPTTHQAKKVKKADIDWADQIYVMTQNHQAELKSLFPKASDKIQLIS
                     EDKTDIPDPYGGSIEQYEITYYELKSAISERFL"
     gene            complement(11722..12759)
                     /locus_tag="U0308_002147"
     CDS             complement(11722..12759)
                     /locus_tag="U0308_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HEM2317108.1"
                     /translation="MQTIHWNINNQQSNQVIFQEAAKLLRSGECVAFPTETVYGLGAD
                     ATNQAAVQKIYEAKGRPSDNPLIVHIARREQMDPFVASYPVKAIQLMEKFWPGPLTVI
                     LPLKKDSLATNVSAGLSTVGVRMPEHPVSLALIDAANIPVAAPSANRSGKPSPTTASH
                     VIEDLDGKIAGIIDGGATGVGLESTVIDCSLDIPVILRPGGVTKEQIEQIIGPVDIAT
                     NNTKETEKPKAPGMKYTHYAPKAPVYLIEGSIQFWQSEINKAEAANKKLGILATKELI
                     NQLNTSGTIEITGSINALDEIATSLYKGLRAFDHADVDVIFAEVYPETELGAAIMNRL
                     EKAAGNRRIRE"
BASE COUNT         3700 a         2733 c         2319 g         4149 t
ORIGIN      
        1 taaatagtaa atgtgaaatg atgatgacat atggtgattc cataataata ttatacatac
       61 gttctctcct catatttcgc tactactcat tttaacaaat acctctagaa aaaaacagtt
      121 aatacactta tgcatataaa aaaacttccc ggcactgtgg ccaggaagta atatgattat
      181 taattgtgtt cttttgcatg aattctgttg atggctcttt gtagtgccag ctgagccatt
      241 acttcgtcca ctttttgttc ttttgctcgg ctaagttctt cttctgcacg ttgttttgct
      301 ttttcagcgc gatcaatatc aatatcttgt tcacgttcag cagtatccgc gagaatatta
      361 acttcttcac cgtttacttc cataaagcca ccattgacag cgacccattc ctcaccagac
      421 tcaactttta aacgaacgat gtcgatttta agtggagcaa ctagtggaac atggccaggt
      481 aaaataccga gttcacctgc ttttgttcta gcaataacca tttgagcaac gccttcataa
      541 acagggccgt ctggagtaac aatactaaca tttaatgaac ccatacgtat ttcctcctgt
      601 ttttatcaga cttcaacgcc catgtctttt gctttttcaa gaacatcctc aatgcgtcca
      661 actgaacgga atgcatcttc aggaatatgg tcgtattttc cggctaatag gtctttgaat
      721 cctttaactg tttctttaac aggaacataa gaaccttttt gacctgtaaa ttgttctgca
      781 acgtggaaat tttgtgataa gaagaattgt acacgacgcg cacgggaaac ggattgttta
      841 tcttcgtcag ataactcatc catacctaag attgcgatga tatcttgtaa ttctttatat
      901 ctttgtaata aacgctgtac ttccgttgct actgcatagt gttcttctcc aacgatatca
      961 ggagaaagcg cacgagatgt agaagcaagt ggatctaccg ctggataaat accttgttcc
     1021 gttaatttac gttccaagtt agttgttgca tctagatggg cgaaagttgt agccggagcc
     1081 gggtcagtat agtcatcggc tggtacataa atcgcttgga tagaagtaac agatccaacg
     1141 ttagtagatg taatacgttc ttgtaattga cccatttcag tagctagggt tggttggtaa
     1201 cctaccgcag atggcatacg acctagtaaa gccgaaacct ctgaaccagc ttgtgtgaaa
     1261 cggaaaatat tatcaatgaa taaaagtaca tcttgatgtt cttcatcacg gaaatattca
     1321 gcaattgtta aaccagttaa ggcaacacgc atacgcgcac ctggtggctc gttcatttga
     1381 ccgaatacca tcgctgtttt ttcaataaca ccagaatctt tcatttcaaa gtaaaggtcg
     1441 ttcccttcac gagtacgttc tccaacgccc gcgaacactg aaataccacc gtgttcttgt
     1501 gcgatattat ggataagctc ttgaattaga acggttttac ctacacccgc accaccgaac
     1561 agtccgattt taccaccttt taggtatggc gctaacaagt caactacttt aattcctgtt
     1621 tcaagaattt ctgttgttgt tgctaattga tcgaaagttg gagcttcgcg gtgaattttg
     1681 ttacgtttaa tatcgcttgg aagtggttcg tccaaatcga tggtgtttcc taatacatta
     1741 aatacacgac caagagttac tgtacctaca ggaactgtaa ttgggctccc agtatcaata
     1801 acttccatac ctctttgaac accatctgtt gatgccattg cgattgtacg aacaacgtca
     1861 tcacctaatt ggatggctac ttctaaagta agttggctag ttggtgcttc ttctgcatca
     1921 gatttatatt caataactag ggcattgtag atttcaggta agtttccacc ttcaaattta
     1981 acgtctacaa ctggacccat aacttggatt acttgtcctt tagacatgca attattcctc
     2041 ctcacttacc ttcccattta tcgggacgtt acaagaaacg ccgacttcta ttctagtgcg
     2101 gctgctcctc cgacgatttc ggtaatttct tgcgtgatcg cagcttggcg agcacggtta
     2161 tattgtagtg ataagtcact gattaaatcg gatgcattgt ctgtcgcgct tctcatggca
     2221 gtcatacgag cagcatgttc agcggctttg gcatccagaa gtgctccgaa aattaggctt
     2281 tccacatatt gcggcaataa tacttccaga atttcttgtt cggaaggctc gaattcgtat
     2341 gtagttaaat ctacatctgt ttccttacct ttttcgtgaa attctgtcag tggtagtagt
     2401 tgctcttttc tcagttcgct agaaatagaa ttaatatggt gattataata aatgaaaacc
     2461 tcgtcataaa caccatcttc aaacatttga actgtgttac tagcaatatc tttaatttcc
     2521 gcaaatatcg ggtgatctgt aatgccttgt acttctaaaa ccacgttcat ttggcgcgct
     2581 ttgaagaagt ctcgagcaga tctacctaca gtgattattg catattcatc acttgacgta
     2641 tgctttttat taatttcttg aaatacttct ttgattacag aactattgta agaacctgca
     2701 agtccagtat cagaagtaag tacgatataa ccagtacggt gaacaggtct agatacaagc
     2761 attggatgat cactactgtt accagtgcta gcaacatgtg ttactacgtc tttaatttta
     2821 gaaacgtaag gctcatatga acgagcgttt gattctgcac gacctagttt tgctgctgaa
     2881 accatttgca ttgcttttgt aatttgactt gttttacgtg tagaagttat tcgttgttta
     2941 atatcgatta aagatgccaa agattttcac cacctttgaa tttattccga gtctaaatta
     3001 tttttcttca gaaggaacaa atgtattttt aaattctttc aatgctgctt caagtttcgc
     3061 ttcgtcagga agttttttcg ttgtacgaat ttcttccaaa agctctgggt gattatgatc
     3121 aaaccatgta ttcatttcgg actcaaaacg cagtacatca tgaactggta catcatccag
     3181 atatttatga acaagtgcat aaagaatcaa tacttgtttt tcaactttca aaggtttgtg
     3241 caaatcttgt tttagaactt ctactgtacg tttaccacgt tctagtttcg cacgagtagc
     3301 tgcatctagg tcagagccga attgtgagaa ggattctagc tcacggtaag cggcaaggtc
     3361 tagacgaagt gttccggcaa cagttttcat tgctttaatt tgcgctgatc cacctacacg
     3421 agatacagaa agaccggcat tgatcgctgg acgtactccg gagaagaata aatcagattg
     3481 caagaagatt tgtccgtctg taatcgagat aacgtttgta ggaatataag cagagatatc
     3541 tccggcttgt gtttctacga atggaagagc cgtaatggat ccgccaccta agctatcatt
     3601 taattttgca gcacgttcaa gtaaacggga gtgcaagtag aaaacatccc ctggatatgc
     3661 ttcacggcct ggaggacgac gaagtaatag agacagctca cgataagcgg ctgcttgttt
     3721 ggataaatca tcatatacga ctaaaacgtg tttgccgttg tacatgaatt cttctgccat
     3781 tgcaacacca gcataaggag ccaagtatag aagtggcgct ggttgagatg ctgctgcagt
     3841 tacgacgatt gtgtaatcta atgcgccgtg atgacgtaat gtttctacgg cattacgtac
     3901 agtagattct ttttgaccga tagcaacata aatacaaatc atgtcttggt cagcttggtt
     3961 tagaatagta tcaattgcta cagatgtttt accagtttgg cggtcaccga tgattaactc
     4021 acgttgacca cgaccaattg gaacaagtgc atcaatcgct ttaatacctg tttgtaatgg
     4081 ttcatttact gattgacgtt gcataacacc aggtgctact gcttcaatcg gacgagttcc
     4141 agttgtttca ataggtccta aaccatcaac tggttgacct aatgagttaa ctacacgccc
     4201 aataagcgct tcgccaacag gaacttccat gattttaccg gtacgacgaa cttcatcgcc
     4261 ttcacggatt tcagtgtaag gacctagaat aatgatacca acatcatttg tttctaagtt
     4321 ttgggccata cccattacac catttgagaa ctctaacaat tcaccagcca ttgcattatc
     4381 gagtccatga gcacgcgcaa taccgtcacc aatgtaggta accgtaccaa catcactcac
     4441 ttttagttca gattgataat tttcaatctg ctgttttatg attgagctga tctcttcagc
     4501 cttaatgctc attgatttca cccctcgtta aacggaaact aggctttaat ttgccgttcc
     4561 atgtccttta atttcgtttt tagactgtca tcatatatac gggttccaat aaccactttg
     4621 actccaccaa gaagggattt atcaatgtga ttttgaatgt ttaactttgt tttgttcatt
     4681 ttcgtagcaa atactctcga gagcgccgta agttcttgtt cggaaagtgg aacaacagaa
     4741 taaacatctg catccgcaac tccattcaag tcgtttacgc gtttttggta aacgtccgca
     4801 ataacagaaa gataatcttc tctgctacgg tcaattaaaa gataaataaa atctcttaat
     4861 gtcggattga ttttttcaaa aacagcgctg gcaagatttt tcttttgctc ggtcgtgaaa
     4921 gtaggatttt caagtagttt tacaaaatct tcattagctt ttaaggccgc ttttaattca
     4981 gttagttctt ctgaaaaaac gtcgactaaa tctttatctt gggctacttg aaaaagcgca
     5041 ttggcatagc gacctgcaac ttccaaatct ttactcattt gtcatcccct agcctttcga
     5101 tataatcttg gataaggtta gattgttctt tttcatccag atttttttcg atgactttcg
     5161 atgcaataag aacagataag gaaccgactt gttcgcgaag agcagaaata gcatcttctt
     5221 tttcacgtgc aatatcggat tttgcttctt cttttatacg ttctgattca cgtctagcag
     5281 ttttgacaat ttcttcgcgt tctttttcac caagctgttt tgcattctca atcattgttt
     5341 gagattccac acgagcttgt tgtaaaacac ttttttgttc agcaagtaat tgttctgctt
     5401 gagcacggct ttcttccgcc gcatcaattt cagaaccaat atgctcttca cgctctttca
     5461 taactcccat aagaggtttc caagcataaa ttcggattaa aactagcaaa atcgcgaaag
     5521 caaaaagtgt gaagaatgca tcaccaaacg taaatgcgga accaattact aaatgtggtt
     5581 gtaacacgcc agtttcactc ctttctatac attcgcttga attattcgtt caaaacgaaa
     5641 gagatgaggt tttatttcct caacttcctt caaattattt attaagaacc atgaacgcaa
     5701 taactacagc gatgatagga agggcctcaa caagaccgat accaatgaac atgattgttt
     5761 gtagcataga acgcgcttct ggttgacgcg caacaccctc gacagttttt gatacgataa
     5821 gaccgttacc aatacccgca cctaatgcac ctaatccaac agcgatagca gctgcaataa
     5881 cacctaaaga catataatta tcctcctaat ttttctaaat attatttttt attactttta
     5941 taaatgactt atttgaaagt tagtttaatg ttcgtcactt accttatgcg acatataaac
     6001 catggtcagc atagtgaaaa tgtacgcttg aattgcccca atgaaaattg agaatccttg
     6061 ccatagtaac gcaggaatta ttgctagcac acctacaaat atgttcatat gagcgagttg
     6121 tgttgcaatg atggttaaca aaacttcgcc ggcgaaaata ttaccgtaaa gacgtaaacc
     6181 aagcgttaaa gtattagcaa attcttctac taatttaagt gggaataaaa atttcattgg
     6241 actaaagtaa gtaccaacaa aatagtgctt gaaaccacgc attttaatac catagtaatg
     6301 cgttaagcca agaaccatta tcgcaagtgt taatgtgaca attggatccg ctgtaggtga
     6361 acgccaccat acttcatcgt taatcgcgat ttgaaatggc agtcctagca tattagctac
     6421 gaaaataaac attagtagcg taataccaag tacatggaat ctcccaccgg ttttccaatc
     6481 catattacta ttaataatac ctctgacaaa atccataacc cattcaatga agttctgctt
     6541 tccggtaggt cggcgttgca gatttctggt acagataatg gctattagaa gaacgatgac
     6601 acaagtcaca gtaatcatca aaatattaga tagattaaag tcgatcccta ataggcttat
     6661 cgttggaaat tcctcttcca attaggttca cccctctctt tttaaaaact tttttctgcg
     6721 gtacatggaa tacacaaaaa aatctagaaa aataattgca tatgcaagcc caagtccgat
     6781 taccatgcta taaacatgaa aaaattccgg cagttgcgtc gctataatag tagcaaataa
     6841 cacgctcccc attctaaatg gcattcccat accataaaaa gaacgatttt cagccaaagc
     6901 tctagtcatt gattgtgtac gcctcattaa tagccagtag ttaaaccagc cgacgattaa
     6961 acccaactta agtcccaaga aaatatgtat atatggggtt aaaaaccatc cacaaagaca
     7021 aacagcaata aaaagaacca tatacttttg atgacgatga tacatgccaa ttagcgattc
     7081 taacattcgg ggcgcaatcc tttctttttc aaaagatttt tctttccaga tgaccatttt
     7141 gaaatctcag ggagtaagtt tggtttgtga aaacaagcac attttcccca attcatccca
     7201 atcccaaaca cacatgaaag ccttatcagc gtgtcagttc ttagcataca acagccaaaa
     7261 gagaaaagtc aatacacttt cacaaattgt aagtacatct attactaata gtaccacaat
     7321 cggacccatc cataaaagaa tagcctatta tttttgagat ttttttgatt tcaaaatcta
     7381 tctgtttctt agattgccac gccagaatta tttttgtcca tttaacagca accaacacct
     7441 ccgtaatcgt tgagaaaacc tatctcctgt tcgtgtgatg tttcacaaaa aaggcgataa
     7501 aaactctctt tcgcacaaat aaaaaaactt ctaccactat tggtaaaaga attcgatacg
     7561 attattcgca aatttcgcga ccgaaagttc ttttcccaag aaaaagaacg gaaaaaacag
     7621 ccggactcat ttatcatgag ttgcattttg atatagagtg cccgtataaa ttccaattca
     7681 gtcaacgcaa acctagcgtc ggcgggattg tagtgaatac tgagcgcagt cttctatccc
     7741 tatgctaaaa acaagctatt ttttgggctc ttatattaat aacattgacc atcttatcac
     7801 atgtaacata aaagaactag tgaaaatcga gcgtgtaaca tatctgtaac aataaggcgc
     7861 tttcattctg aaaaaagagg aaaactagac ttcaacgcct agttttccac tgtgttttac
     7921 acgataaaat cttctggtcg accagtttct tcaaagtgac tcttgattgc tgctaaaatt
     7981 cgattagctg cgaatccgtc gccatatgga tttaccgcgt gtgccatttt atcatgattt
     8041 tctttattat ccagcaaatt cagtgcttct ttaattagat tctctttatt tgttccaatt
     8101 agtttcaacg tcccggcttc gattccttct ggacgctccg tcgtatcacg taaaactaaa
     8161 actggcacgc ccatgcctgg agcttcttct tgtacgccgc ctgaatcggt aaaaacaaga
     8221 taagacttgc gcaagaaatt atgaaaatca attgcgtcga gtggctcgat taaatgaatg
     8281 cgttcatgtc cacctaagat tttcgtcgct ttttctctaa cggctggatt caaatgcatc
     8341 ggataaacga gttcaacatc ctcacgactt tccacgattt ctcgaaccgc ctcaaacatc
     8401 ccttgcatcg gttcgcctaa attttccctg cggtgagccg tcataagtat taaacgattg
     8461 tcgccaagat tttccaagat tggatggtgg taatcttttt gcacagttgt tctaagggca
     8521 tcaatcgccg tatttccagt cacaaaaata gtacccggat cttttccttc cgcaagcaga
     8581 ttttctttcg cttgtttagt tggagaaaag tgcatatccg ccattacacc agttaactgg
     8641 cgattcattt cttctggaaa cggcgaatat ttattccatg ttctaagtcc agcttcgaca
     8701 tgtccgagca ttttttgttg ataaaaggta gctagtcctg ctgcaaaact tgttgttgta
     8761 tcgccgtgaa ctagaacgat atccggattt tcggctgcaa taacttcatt aattccattc
     8821 attacacgcg aagttatttc agctaaagtt tggccttttt tcataatatc taagtcaata
     8881 tctggtttaa tatcaaaaat ctctaagact tgatctagca tttcacggtg ttgagctgta
     8941 atcactaccg ttgactcaaa tgtttctggt tctttttcta gtgccaaaac gagtggtgcc
     9001 atttttattg cttctggtct tgtcccaaag atactcatta ctttgatttt agccaattgc
     9061 gaacctcctt ataaaaaaac tcctcagaaa tagctcgaca aaaaatttcc cagcctgtta
     9121 aaaagcagta ctgtttataa ttccttatct cactaaaccg aggagattgt taattattta
     9181 gttccgaata atctatcgcc agcatctcct aagcctggac ggatataacc attttcgtct
     9241 aacttctcgt ctaaaccagc tacgtagatt tctacgtctg gatgtgcgtc ttgaagggct
     9301 ttaacgcctt caggagctgc tactagacac atgaatttca tgttacgagc gccgcgtttt
     9361 ttcaagcaat cgatagccat aattgcggat ccgccagttg caagcattgg atctacaacg
     9421 atgaaaagac gttcttctac gtcagaaggt agttttacaa aatattcgac tggttctagt
     9481 gtatcatggt cacgataaag acctacatgc cctacttttg ctgcaggaat aagttttaaa
     9541 ataccatctt gcataccaag tccagctctt aaaataggaa caatccctaa ttttttacca
     9601 gtaagtgttt tcgcagttgt tgtttgtagt ggtgtttcta cttggatgtc ttcgagttcc
     9661 atatcacgtg taatttcgta cgccattaat gtagcgactt catctacaag ttcgcggaat
     9721 gcttttgttc ccgtattttt atctcgaatg attgttaatt tgtgttggac tagtgggtga
     9781 ttaattacgt gtacatttgc cattgattag ttcgctcctt tgatattgaa aatttccttc
     9841 tcttattgta tcagaacaag acacaagtgc aaggattaat ttgctataca tgaaaaaaac
     9901 cggttttctc tattttatag aaaaaaccgg atcacttatt ttataaactt ggataaagcg
     9961 gatattcatt tgttaaagta gccacgcgtg cttttacatc tgcgagaact tcttcatttt
    10021 ctaaattatg cagtacttct gaaataagta caccaacttt ttcaatcgca acttcatcaa
    10081 atccacgagt ggtcactgca gcaacaccta cacggatacc acttgtgaca aatgggcttt
    10141 ccgtttcgaa tggaatggta tttttattca cggtaatacc aacttcatct aatactttct
    10201 ccgctgcttt tcctgttaag ccaagtggtt ttaaatcaat taataataaa tgattatccg
    10261 aaccacctgt taaaacagca acatcattcg cttgaagtgt ttctgctaat tttttagagt
    10321 tacgaataat ttgttcacag tacgccgtga attcaggttg taacgcttca ccaaacgcca
    10381 ctgctttcgc tgcgattacg tgcattaacg gtccaccttg gattcctggg aaaatcgatt
    10441 tatttaattt ttgttcccat tctgctttgg ctaaaatcat tccgccgcga ggtccacgaa
    10501 gcgttttatg ggtagttgtc gttgtaaaat cagcataagg aactggattt tgatgcaagc
    10561 cagcagcaac aagaccagca atatgcgcca tatctaccat taagtatgcg ccaacttcat
    10621 cagcaatttc gcggaattta gcaaaatcaa ttttacgtgg ataagcactt gcgccagcta
    10681 caatcatttt tggtttatgt tttaaagctg cttcacgaac aatatcgtaa tcaatttctt
    10741 tcgtatcttc acgaacgccg tattcaacaa aattgtataa aacaccgctg aaatttactg
    10801 ggctaccatg tgttaaatgc ccaccatgtg aaaggttcat accaagaaca gtatcgcctg
    10861 gttcaagcac tgtatgataa actgccatat tcgcttgagc acctgagtgt ggttggacat
    10921 tcgcatattc agcgccaaat aattttttcg cgcggtcgcg tgctaaatct tccacaatat
    10981 ccacgaattc acatccgccg taatagcgtt tccctgggta accttctgca tatttattcg
    11041 ttaatacaga tcccatagct tccattactt gctcactaac aaaattctca gatgcgatta
    11101 attcgatatt cgcgcgttgt ctaccaagct ctaacttaat tgcatcaaaa acttccttat
    11161 cttgcttttg taaatagacc atctgtggac cccatccttt tctgataaat ttttcaagtg
    11221 aactgttatg tattatcttt aataattact taaatcgggt agaaaagcaa gcattttgga
    11281 ataaaaaaac gcaatttccg atagtgaagc gcttcactta taaaaaacgt tcggaaattg
    11341 cactttttag ttcgtaatag gtgatttcgt attgctcgat tgatccaccg taaggatctg
    11401 gaatatctgt tttatcttcg gaaattagtt gaattttatc gctcgctttt ggaaaaaggc
    11461 tttttagttc cgcttgatga ttttgagtca ttacgtagat ttggtctgcc caatctatat
    11521 ctgctttttt aactttttta gcttggtgcg ttgttggcaa attcatctgc gcgagaattt
    11581 gacgtgagtt ttcagagatg gcatccccgt ccagagcacg tgtcccagcc gaacgaacat
    11641 ctaaatccgg acgcaagttc tgcaagattt tttcagctaa agggcttcgg cacgtatttc
    11701 ctgtacaaac aaataatacc ttcattcgcg aatcctcctg ttgccagcag ctttttctaa
    11761 tcggttcata atcgctgctc caagttccgt ttctggatac acttccgcaa aaatcacatc
    11821 tacatcagca tggtcgaaag cccgtaaacc tttgtaaaga cttgtagcaa tttcgtccaa
    11881 tgcatttata ctgccagtta tttcgatggt accgctcgtg tttagttgat ttatcagttc
    11941 ttttgtcgcc aaaataccga gttttttatt cgcagcttcc gctttattta tttcactttg
    12001 ccaaaattgg atagatcctt ctattagata aactggcgct ttcggggcat agtgcgtgta
    12061 tttcatgcca ggtgcttttg gtttttccgt ttctttcgtg ttgtttgtcg ctatatcaac
    12121 agggccaatt atttgttcaa tctgttcttt tgtaacaccg cctgggcgca gaataactgg
    12181 gatatctaaa gaacaatcaa taacggtgga ttctaaacct acaccagttg cgccgccatc
    12241 gataattccg gctatttttc catctaaatc ttctattaca tgactcgccg tcgtcggact
    12301 tggttttcct gaacgattcg cgcttggagc cgcaacagga atattcgctg catctatcaa
    12361 tgctagacta acagggtgtt ccggcatacg gacgcctact gtggataaac ccgcagaaac
    12421 attagttgcc aaactatctt ttttcaatgg aagaataacc gttagcggac ccggccaaaa
    12481 tttttccatg agctggatgg cttttactgg ataacttgca acaaatggat ccatttgttc
    12541 acgacgggcg atgtggacaa ttaatgggtt atctgacgga cggcctttcg cttcatatat
    12601 tttttgaaca gcagcttggt tagttgcgtc tgcaccaaga ccgtacactg tttcagttgg
    12661 aaaagccacg cattcaccgc ttcggagtaa tttggctgct tcctgaaaga ttacttggtt
    12721 tgattgttgg ttatttatgt tccaatgaat ggtttgcatg aattccggtc ccctttacat
    12781 aacttctatt atattttaac gttttccgcc ttatttttac agtattgttt tttaaaacct
    12841 gtaaatcgct atttttgaac aaaagttatc cccaaactgt ggataataac tttgtcaatg
    12901 g
//
LOCUS       DASDYK010000084        12371 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.084, whole genome shotgun sequence.
ACCESSION   DASDYK010000084 DASDYK010000000
VERSION     DASDYK010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12371
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.084"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(355..1248)
                     /locus_tag="U0308_002148"
     CDS             complement(355..1248)
                     /locus_tag="U0308_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM2317109.1"
                     /translation="MKWFKGIAVVLLLAILTACGNTEVKETTKQTEEIKVKDATGETI
                     TLKKAPTKIVSLIPSNTEILFALGLGDEVKGVSAYDDYPKEAQKIEKVTSTSVDTEKI
                     IALKPDLVLGHESMLATEKDAYKILTDAGINVFVVPDATNLKEVEKSIATIGDLTGTE
                     KEATKVTDSMEKQKVAIEKKAKELKTSPKVWIEISPDLYTAGKGTFMNEMLELAGGTN
                     IVTESGFIPYNEEKVVELQPDIILSVYPDAKATIQKRAAWKDIPAVKNDKIYEMDANK
                     LSRPGPRLLEGAADIQAVLEN"
     gene            complement(1402..4842)
                     /locus_tag="U0308_002149"
     CDS             complement(1402..4842)
                     /locus_tag="U0308_002149"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate carboxylase"
                     /protein_id="HEM2317110.1"
                     /translation="MNRIKKVLVANRGEIAIRVMRACTELKIKTVAIYSQEDTGSFHR
                     YKSDEAYLVGAGKKPIDAYLDIENIIEIAKESGADAIHPGYGFLSENIEFARRCEQEG
                     IIFVGPKSKHLDMFGDKIKAKEQALLADIPVIPGSNGPVAGIKEVEEFGEKNGYPLMI
                     KASLGGGGRGMRVVESKEHVKESFERASSEAKAAFGNDEVYVEKCVMNPKHIEVQILG
                     DTHGNIVHLFERDCSIQRRHQKVVEVAPCNAITSELRNRICDAAVKLMKNVDYINAGT
                     VEFLVEGDDFYFIEVNPRVQVEHTITEMITGIDIVQSQLFIADGYALHDQLVAIPKQE
                     DIHIHGSAIQSRITTEDPLNNFMPDTGRVDTYRSTGGFGVRLDAGNGFQGTVVTPFYD
                     SLLVKLCTWGMTFEQATRKMRRNLIEFRIRGVKTNIPFLLNVVRHPDFASGNYNTSFI
                     DTTPELFKFPHIRDRGTKTLRYIGNVTVNGFPGIKHRDKPVYAEPRLPKIPYGSQISP
                     GTKQILDAKGPEGVVDWVKKQEEVLLTDTTLRDAHQSLLATRVRSKDIFQIADAMAHL
                     LPNMFSFEMWGGATFDVAYRFLNEDPWVRLETLRKQIPNVMFQMLLRGANAVGYKNYP
                     DNVIREFVKQSAQSGVDVFRVFDSLNWIKGMEVSIDAVREAGKIVEAAICYTGDIDDD
                     TRTKYTIDYYKDMAKELVAQGTHILGIKDMAGLLKPQAAYRLIGELKDTVDVPIHLHT
                     HDTSGNGIYTYAAAVSAGVDIVDVASSAMSGATSQPSMTGLYYGLVNGNRQTNLDAQN
                     SQIINHYWEDVRHYYKDFDNALNSPQTEVYIHEMPGGQYTNLQQQAIAVGLGDRWDEV
                     KEMYTVVNQMFGDIVKVTPSSKVVGDLALFMVQNELSEEDVYEKGDTIDFPDSVIEFF
                     MGEIGQPYGGFPEKLQKLVLKGRTPLTDRPGALMEPVNFVEVKAELKEKMGYEPTEKD
                     VISYILYPKVFLDYQEMINKYGDVTVLDTPTFYKGMRLGETIEVELEKGKILLIKLNS
                     IGEPIADGTRVIYFELNGQPREINIQDMNVQSTVIARRKIDTTNPEHVGATMTGSVIQ
                     VVVKKGDSVKKGDPLLITEAMKMETTIQAPFDGEVSSIYVSDGDTIESGDLLIEVNRI
                     "
     gene            complement(5120..6322)
                     /locus_tag="U0308_002150"
     CDS             complement(5120..6322)
                     /locus_tag="U0308_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEM2317111.1"
                     /translation="MFKRILKSYDYAFIAVFIVLCLFGLIMIYSASWSLAIGKGLPAD
                     YFYARQVKNFIISFIFFILFALLPFKFYQNNKVLMLIVFGSIGVLLLIFLVGKTVNNA
                     NSWLVLGPRSLQPGEFAKLAVIIYMSAIYAKKQSYIDDFNRGVLPPIFFLAFVCFLIA
                     IQPDTGTAFIIFLVGCCIIITSGMRLRTIMKLIGIGMGIIIGLTLILFALPDSVRNEI
                     VSPTKVARITTFMNPFEYADKEGHQLINSFYAIGSGGVSGQGLGESVQKLGYLPEAHT
                     DFIIAVVAEELGVFGVMFIILALFFIIFKTITTGLRAKDPFASLMCYGIASLIAIQAF
                     INLGGASGLIPLTGVTLPFISYGGSSLMVLSMMLGIVANISMFTKYQRVYKADGSTRE
                     LPKKQKRR"
     gene            complement(6504..6785)
                     /locus_tag="U0308_002151"
     CDS             complement(6504..6785)
                     /locus_tag="U0308_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaN family protein"
                     /protein_id="HEM2317112.1"
                     /translation="MANKKIDHREEAVELLKQDAKRILQLIKVQMDNLTLPQCPAYEE
                     VLDTQMYGLSREINFATRLGLIEPEEGKKLMSTLEKELSTLHELSMSKK"
     gene            6991..7221
                     /locus_tag="U0308_002152"
     CDS             6991..7221
                     /locus_tag="U0308_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaI family protein"
                     /protein_id="HEM2317113.1"
                     /translation="MNAKCILCERVDELDNREFKTKQLRNKPIRMYLCPECEHRVAIN
                     TISRVNSGHFNFHKPVVMSNSELKNLIESAGK"
     gene            complement(7253..8131)
                     /locus_tag="U0308_002153"
     CDS             complement(7253..8131)
                     /locus_tag="U0308_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5068 domain-containing protein"
                     /protein_id="HEM2317114.1"
                     /translation="MMKKRIIILAVLVVLLIGGVVIGVYASGNSAKDNNESKTTAKKA
                     TSTPKKAIDTEKKETTTKEATTKDSVTDDKGVVTKGSSDVEKNAPAKNNSSATDKSNS
                     PTTPAFSLSSTGFKTSNVSSVLGGTVTTTYLSSAPSFEKIFENLTIEVNQYKVEHVVG
                     ANKAVSASNPESYLANKNGYVITLDISIKNTSAKDKMYKADQITLIGANEFVGGSLDN
                     FVPSNFHLIGSKADPNIFTAGKTARGLLTFTMTEAVYNDLAADSKIGVPNPDKFDASV
                     SEANAGDDVVASFPVK"
     gene            complement(8306..10144)
                     /gene="typA"
                     /locus_tag="U0308_002154"
     CDS             complement(8306..10144)
                     /gene="typA"
                     /locus_tag="U0308_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEM2317115.1"
                     /translation="MNLRNDIRNVAIIAHVDHGKTTLVDQLLRQSGTFRDNETVAERA
                     MDNNDLERERGITILAKNTAIKYEDTRVNIMDTPGHADFGGEVERIMKMVDGVLLVVD
                     AYEGTMPQTRFVLKKALEQNLTPIVVVNKIDRDFARPEEVVDEVLELFIELGANDDQL
                     EFPVVYASAINGTSSYDSDPAEQKETMKPLLDTIIEHIPAPVDNSDEPLQFQVSLLDY
                     NDYVGRIGIGRVFRGTMHVGQTVALIKLDGTVKQFRVTKMFGFFGLKRDEIKEAKAGD
                     LVALAGMEDIFVGETVTPFDHQEALPLLRIDEPTLQMTFVTNNSPFAGREGKHVTSRK
                     IEERLLAELQTDVSLRVEPTASPDAWVVSGRGELHLSILIETMRREGYELQVSKPEVI
                     IREIDGVKCEPVEDVQIDTPEEFMGSVIESISQRKGEMKNMINDGNGQVRLQFMVPAR
                     GLIGYTTDFLSMTRGYGIINHTFDSYQPIQKGRVGGRSRGVLVSMETGKSTTYGTMQV
                     EDRGTIFIEPGTDIYEGMIVGENNREGDIAVNIVKAKQMTNIRSANKDQTNVIKKPRH
                     LSLEESLEFLNEDEYCEVTPESIRLRKKILNKNEREKAAKRSKTAE"
     gene            complement(10336..11109)
                     /locus_tag="U0308_002155"
     CDS             complement(10336..11109)
                     /locus_tag="U0308_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEM2317116.1"
                     /translation="MDSEKIDYLARLWIMEAAAKIKQSFKETLDIDVKSGRNDLVTNM
                     DKETEAFFVQQIKDHFPDHRLFGEEGMASDVTDLDGVVWILDPIDGTLNFVEQQRDFA
                     ISLAVYEDGIGQLAYIYDVARDELYFGEKGKGATVNGRTIPKLDPAIDLKDTLLIANL
                     SVTRKFPTMWEAVKASRGLRLHGAASLEYMDVATGRAGAYLSANLAPWDIAAGKIIVE
                     ELGGKVTRINGEKINMLEKGSSIVASPKIHQTLLDNYLP"
     gene            11240..11854
                     /locus_tag="U0308_002156"
     CDS             11240..11854
                     /locus_tag="U0308_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YktB family protein"
                     /protein_id="HEM2317117.1"
                     /translation="MTFKGFSKKDFKTMQIPGLEARMNGIQTDIQPKFRAVGEELTTY
                     LSAKLGDEMFLHIARHQRRSVNPPESTWLAICHDKRGYKKHPHFQVGLFDNYLFIWLA
                     FIYENEESAKIANRFLKEKKLLADLPDNFAISPDHTEEKTYPVHDGQLKATLERFRDV
                     KKGEFLVGKIYLPDDSHLSPGKDFIKEAEMVLDELIPLYKASLQ"
     gene            12055..>12371
                     /locus_tag="U0308_002157"
     CDS             12055..>12371
                     /locus_tag="U0308_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEM2317118.1"
                     /translation="MHQIFKSDENGKLIELEEVTRNCWINIVAPTSEEINKIADNYEI
                     PLEFLEDPLDKDESARIERDDDSDSVLIVCDFPVVDEDDIHYASFETIPMGIIITKDY
                     FIT"
BASE COUNT         3652 a         2486 c         2107 g         4126 t
ORIGIN      
        1 catagcgcgc aatgcgaaat atcattggta aattttttat ttgttcttta ataacttcca
       61 taacctgttt cacaaaaaca cttcttcccg aaaaataata tggttttaat aaccagattc
      121 agctcactat tcttttatag gcaactcctc cacttaaaac cacagacacc ttgtttgtat
      181 tatttgtcgt ctcggttgcc atattcttgc tgtttatgca tgatcttcta agtgtatata
      241 gctctgctta tttggcaaat tattttacta atacggttta gtaaaaaatc caccctatgt
      301 taaattacct taaaagtcat tttttgtaaa gcttcatctg caattatcaa agaattagtt
      361 ttcaagaaca gcctgaatat ctgctgcccc ttcaagcaat cttggtcctg gacgacttaa
      421 tttattggca tccatttcat agattttatc gtttttaacc gctggaatat ctttccatgc
      481 tgcacgtttt tggatagttg ctttggcatc tggatagaca gataaaatga tatccggttg
      541 cagttctact actttttctt cgttgtaagg aatgaaccct gattctgtta caatattagt
      601 tccaccagca agttctaaca tttcattcat aaatgttcct tttcctgctg tgtataagtc
      661 tggactaatt tcaatccata cttttgggga tgtttttaat tctttcgctt tcttttcaat
      721 agctactttt tgtttctcca ttgaatcggt cacttttgta gcttcttttt ctgttcctgt
      781 tagatcacca atggtagcaa tcgatttttc tacttccttt aagtttgttg cgtctggaac
      841 tacaaacacg ttaattcccg catctgtaag tattttataa gcgtcttttt ctgttgcaag
      901 catcgattcg tgtccaagaa ctaaatcagg cttaagagca ataatttttt ctgtatcaac
      961 tgaagtagaa gtcactttct ctattttctg agcttctttt ggataatcat catatgccga
     1021 tactcctttt acttcatcac caagtcctag tgcaaataaa atttctgtat tacttggaat
     1081 taatgaaaca attttagttg gagctttttt cagtgtaatt gtttcaccag ttgcatcttt
     1141 cactttgatt tcttctgttt gctttgttgt ctcttttact tccgtattcc cgcatgcagt
     1201 taaaatagca agcaataaaa ctacggcaat tcctttaaac catttcatat gtatgttctc
     1261 cttttttcag aaaaaacagg cgggaaatct aacactaata aatctggaaa aacgtcttta
     1321 ttctcacgtt taacttatcg atttttaaag ttcttcactt taaattagcg tcatattccc
     1381 acccgttagt catttatgtt tttaaattct gtttacttca attaaaagat caccagattc
     1441 gatagtatcg ccgtcagaaa cataaatgct gctaacttct ccatcgaaag gcgcttgaat
     1501 cgttgtttcc attttcattg cttctgtgat tagtagtgga tcaccttttt tcacagagtc
     1561 gcctttttta acaactactt gaatgactga acctgtcatt gtagctccaa catgttcagg
     1621 gttagttgta tcaatcttac ggcgtgcaat aacagtggat tgaacgttca tatcttggat
     1681 gttaatctca cgtggttgtc catttaattc aaaatagata acacgtgtgc catccgcaat
     1741 tggttcacca atagaattta gcttgattaa aaggattttt cctttttcaa gttctacttc
     1801 gattgtttcc cctaaacgca ttcctttata gaatgttggt gtatcaagga ctgttacatc
     1861 accatattta ttaatcattt cttgataatc taggaacact tttggataca aaatatagga
     1921 aatgacatct ttttcagttg gttcataacc cattttttct tttaattctg ctttgacttc
     1981 aacaaagtta actggttcca ttaaagcgcc tggacgatct gtaagtggtg tacgtccttt
     2041 gagtactagt ttttgaagtt tttctgggaa gccgccgtat ggttgaccaa tttcccccat
     2101 aaagaattcg ataacggaat ctgggaaatc aatggtatcg cctttttcgt atacatcttc
     2161 ttcggataat tcattttgaa ccataaatag tgctaagtct ccaacaactt tggaagaagg
     2221 tgttacttta acgatatcac caaacatttg attaaccact gtatacattt ctttcacttc
     2281 gtcccaacga tcgccaagtc caactgcaat ggcttgttgt tgaaggttag tatattgacc
     2341 acctggcatt tcatgaatgt atacttctgt ttgaggtgaa ttaagtgcat tgtcaaagtc
     2401 tttgtaatag tgacgaacat cttcccagta atgattaatg atttgggaat tttgagcgtc
     2461 taaattcgtt tgacgattac cattcactaa tccgtaataa agaccagtca tacttggttg
     2521 gcttgtagcc ccactcattg cgcttgatgc cacgtccaca atgtcaacgc cagcactgac
     2581 agctgctgcg taagtataaa taccgttgcc gcttgtgtca tgcgtgtgaa ggtggattgg
     2641 aacatctact gtatctttta attcgccaat caaacggtat gccgcttgtg gttttaaaag
     2701 cccagccata tctttgattc ctaggatatg cgtgccttga gcaacgagct ctttcgccat
     2761 atctttatag taatctatgg tatatttcgt tcttgtgtca tcatcgatat ctcctgtata
     2821 gcagatagca gcctctacga tcttccctgc ttcacgaaca gcatcaatgg acacttccat
     2881 gcctttgatc cagtttaagc tgtcaaacac gcggaataca tccacaccgg attgtgctga
     2941 ttgcttaacg aattcacgga taacattgtc aggatagttt ttatacccaa ctgcattagc
     3001 tccgcgaagt aacatttgga acatcacgtt tggaatttgt tttctaagtg tctctaggcg
     3061 cacccaagga tcttcattta ggaaacgata tgccacgtca aaagtcgcgc caccccacat
     3121 ttcaaaggaa aacatgtttg gtaataaatg agccatcgca tctgctattt ggaaaatgtc
     3181 tttcgagcga acacgtgttg caagtaaaga ttggtgcgca tcccgaagtg tagtgtctgt
     3241 taagagcact tcttcttgtt ttttcaccca gtctacaacg ccttctggac cttttgcatc
     3301 caaaatttgt tttgtacctg gagagatttg cgaaccatac ggaatttttg gcaagcgtgg
     3361 ttctgcatat acaggtttat cacggtgctt aattcctggg aaaccattaa ccgttacatt
     3421 accaatataa cgcaacgttt ttgtaccacg gtcgcgaata tgtgggaatt taaatagttc
     3481 cggtgttgta tcaataaagc ttgtattata attaccactt gcaaaatccg gatgacgaac
     3541 aacatttaat aagaaaggaa tgttcgtttt gacaccacgg atacggaatt caattaagtt
     3601 acgacgcatt ttgcgcgttg cttgttcgaa tgtcattccc caagtacata attttacaag
     3661 taaggaatca taaaatggtg ttactactgt tccttggaag ccgttaccag catccaaccg
     3721 aactccaaac ccacctgtag agcgatacgt atctactcga ccagtatctg gcataaagtt
     3781 attaagtgga tcttccgttg taatacggct ttgaatagca gaaccgtgaa tatggatatc
     3841 ctcttgctta ggaatagcta ctagttggtc gtgaagcgcg taaccatctg caatgaatag
     3901 ttgtgattga acaatatcaa tccctgtaat catttcagta attgtatgct ccacttggac
     3961 acgaggattt acttcgataa agtagaaatc atcgccttcc actaaaaatt caactgttcc
     4021 agcattaatg taatcaacat ttttcattaa ttttactgca gcatcacaga tacggttacg
     4081 tagttcagaa gtaatcgcat tacatggcgc tacctctact actttttgat gacgacgttg
     4141 gatagaacaa tcacgttcaa ataaatgaac gatgttgcca tgggtgtcac caagaatttg
     4201 tacttcgata tgtttcggat tcatcacgca tttttctacg tatacttcat cgttcccaaa
     4261 tgccgctttt gcttctgagg atgcacgttc aaagctttct ttgacatgtt cttttgattc
     4321 tacgacacgc ataccacgac cgccgcctcc aagagaagct ttaatcatta atgggtaacc
     4381 gtttttctca ccaaattctt ctacttcttt aataccagcc acgggtccat tacttcccgg
     4441 aattactgga atatcagcta atagagcttg ttcttttgct ttgattttat caccaaacat
     4501 atctaggtgt tttgatttag gaccaacgaa aataatgcct tcttgctcac aacgacgagc
     4561 aaattcaatg ttttcggaca agaaaccata tcccggatga atcgcgtctg caccagattc
     4621 tttagcaatc tctattatgt tttcgatatc tagatacgca tcaataggct ttttccctgc
     4681 tccaaccaga taagcttcat ctgatttata ccggtgaaaa cttccggtat cttcttgtga
     4741 ataaatagcc actgttttga ttttgagttc agtacacgca cgcataacac ggatagcaat
     4801 ttctccgcgg tttgctacta atactttttt aattcgattc atttttttcc tcctaaccaa
     4861 cactgatctg ttctatactt tatacatagc ctccaacggt tgaaatgatt atgtacactt
     4921 atatgataat cccctttttt taggctgtaa aacggtatat aacttcaatt atagtattaa
     4981 ataccatcag atgtaaatta ttttctttct aaatatttaa aacaatatcg aaaacacgaa
     5041 taaactggct ataaaacgcc aaaaacatgc ggtaaagcaa aaaaagaaaa agctaattaa
     5101 ttagcttttt cttcataatt taacgtcttt tttgtttctt tggtaactct ctcgtggaac
     5161 catctgcttt ataaacacgt tggtatttag tgaacattga aatattcgct acgataccaa
     5221 gcatcatcga gagcaccatt aaggaagatc caccataact aataaatggc agcgttacac
     5281 cagtaagcgg aatcaaacca ctagctccac caagattaat aaatgcttga atcgcaatca
     5341 gactagcaat cccgtagcac attaaggagg caaatggatc cttcgccctg agtccggtcg
     5401 tgatagtttt aaagataatg aagaacagtg ccaaaataat aaacatcaca ccgaacacac
     5461 ctaattcttc tgcaacaacg gcaataataa aatcggtgtg tgcttccggc aagtaaccaa
     5521 gtttttgaac gctttcgcca agcccttgtc cagaaacacc acctgagcca atcgcataga
     5581 aggaattaat taactggtgc ccttctttat ccgcatactc aaaagggttc ataaaagtcg
     5641 taatacgagc tactttcgtt ggagaaacaa tttcattcct cacactatcc ggtagtgcga
     5701 ataagatgag cgtgagtcca ataataatac ccataccaat cccaattaat ttcataatcg
     5761 ttcgaagtcg cattccagaa gtgataataa tacaacaacc aactaagaaa ataataaaag
     5821 ctgtcccagt atctggctga atggcaatca agaaacatac aaatgctaaa aagaatatgg
     5881 gcggtaaaac accacggtta aaatcatcaa tgtaactttg tttcttcgca tagatggcag
     5941 acatgtaaat aattacggct aatttagcaa attctcctgg ttgaagagaa cgtggcccta
     6001 aaacaagcca actgttcgca ttatttaccg ttttacccac taagaaaatc agtaataaga
     6061 caccgatgga tccaaataca attaacatta acactttatt attttgataa aatttaaatg
     6121 gcaaaagagc aaaaagaata aagaaaataa aactaattat aaagttcttt acttgacgag
     6181 cataaaaata atctgccggt aagcctttac caattgctaa agaccagctg gcactataga
     6241 tcataataag cccaaataaa catagcacga taaataccgc tataaatgca taatcataag
     6301 attttaaaat tcgtttaaac atcggcatcg tccaatccct gagaagttac tatcccatct
     6361 tgttttctat tcttcctatt ataaaggaaa agacctccaa atgaaaagaa gaatcgcctc
     6421 cttcttttgg ctcatttttt aatctttcgc tggcaaacaa aaaaagatgt cagaaaaaat
     6481 cagacatctt ttcaattgat tcattatttt ttactcatgg acagttcatg taaagtggac
     6541 aattcttttt ccagtgtaga cattagtttc ttgccttctt ctggttcaat tagtcctagg
     6601 cgggttgcaa agttaatttc acgtgataaa ccatacattt gtgtatcaag aacttcctca
     6661 tatgctggac attgcggtaa tgttagatta tccatttgaa ctttaatcaa ctgtaagatt
     6721 cgttttgcgt cttgctttaa aagctccact gcctcttctc tgtgatctat ctttttattt
     6781 gccatcacag aaccccctat catacgccaa aagtagcgct ttattttcat ctcaaggaaa
     6841 aaccttaagt aaaagttaat actagatagt actagtatag cataatttat ttaccacgca
     6901 agcacgatct aattaaaatt tttgaaaaat tcacttttac tcgccttttt cgataatcat
     6961 gctataatac ttgtgtgagg tgaagacaaa ttgaacgcaa aatgtatctt gtgcgagcgt
     7021 gtagatgagc tagacaatcg cgaatttaaa acaaaacaat tacgtaataa acctattaga
     7081 atgtatctat gtcctgaatg tgaacatcga gtagctatta acactatcag tcgcgttaat
     7141 tctggtcatt tcaattttca taaaccagta gtaatgtcga atagtgagtt aaagaattta
     7201 atagaaagtg ctggaaaata gagaaaatcc gccctttatc gggcggattt ttttatttta
     7261 ctgggaatga ggcaactaca tcatcgcctg cattagcttc agaaacactt gcatcaaatt
     7321 tatcaggatt tggaacacct atttttgagt cagctgctaa atcattgtac acagcttctg
     7381 tcattgtaaa tgtaagaagc ccacgagctg tttttccagc ggtgaaaata tttggatctg
     7441 ctttacttcc tataagatga aaattagaag gaacaaaatt atctaagctt cctcctacaa
     7501 attcatttgc tcctataagt gtaatttggt ctgctttgta cattttatct tttgcagaag
     7561 tatttttaat ggaaatgtct aaagtgatta catagccgtt tttatttgct aaatagcttt
     7621 ctggattact tgcactaact gctttattcg caccaacaac atgctctact ttatattgat
     7681 tcacttcaat cgttaaattt tcaaagattt tttcgaatga tggggcactc gacaaatacg
     7741 ttgttgttac agttccacca agaacagaag atacattgga agttttgaag cctgtactag
     7801 ataacgaaaa agccggtgta gttggactat tgcttttatc tgttgcacta ctattatttt
     7861 tggccggtgc gtttttctct acatctgagc ttccttttgt gactacacct ttatcatccg
     7921 ttacggaatc ttttgttgtc gcttctttgg ttgttgtttc ttttttctct gtgtcaattg
     7981 ctttcttagg tgtagatgtg gcttttttag ctgttgtttt gctttcattg ttgtcttttg
     8041 cagagtttcc gcttgcataa acaccgatta caactcctcc gataagaagt accactaata
     8101 ctgcaagaat aattatacgt tttttcatca tactaaccac cttttctact tacttctaat
     8161 ataccaaata gcttttcata ttacaatagt gttacaaaca cattatttta ttcccttttc
     8221 cagcaaatta aagcataaaa aaaccaaata gtttttaaag gatattccta ccacttaaaa
     8281 accatttggc cgattcaaat atatattatt cagcagtttt tgaacgtttt gctgcttttt
     8341 cacgttcgtt tttgtttagg atttttttac gtaaacggat ggattctggt gttacttcac
     8401 agtattcatc ttcgtttagg aattctaatg attcttctag tgataaatga cgaggttttt
     8461 tgattacgtt tgtttggtct ttgttagcag aacgaatgtt agtcatttgt tttgctttca
     8521 caatgtttac agcgatatcg ccttcacgat tgttttcccc aacgatcata ccttcgtaaa
     8581 tatccgtacc aggttctata aaaatagtac cacggtcttc tacttgcatt gttccgtaag
     8641 tagtagattt acctgtttcc atggatacaa gaacaccacg actacgtccg ccaacgcgtc
     8701 ctttttggat tggttggtag ctatcgaatg tgtggttgat aataccataa ccacgagtca
     8761 ttgaaaggaa atcagttgta taaccgatta agccacgagc tggaaccatg aattgtaaac
     8821 gaacttggcc gttaccgtcg ttaatcatgt ttttcatttc gcctttacgt tggctaatag
     8881 attcaataac agaacccatg aattcttctg gagtatcaat ttgaacatct tctactggtt
     8941 cacatttcac gccatcaatt tcacggatga ttacttctgg tttagaaact tgtaattcat
     9001 aaccttcgcg acgcattgtt tcgatcagaa tggataaatg aagctcacca cgaccagaaa
     9061 ctacccaagc gtctggagaa gctgttggtt caacgcgtaa agatacatcc gtttgaagtt
     9121 ctgcaagtaa gcgttcttca attttacggc ttgttacgtg tttaccttca cggcctgcga
     9181 aaggactgtt atttgtaaca aaagtcattt gcaatgttgg ctcatcaata cgtaaaagtg
     9241 gaagtgcttc ttggtgatcg aaaggtgtta ctgtttcacc aacgaaaatg tcttccattc
     9301 ccgcaagtgc tactaagtca cccgcttttg cttctttaat ttcgtcacgt tttagtccga
     9361 agaaaccgaa cattttcgtt acacggaatt gttttactgt gccatcaagt ttaattaaag
     9421 caactgtttg tcccacgtgc attgttccac ggaatacgcg gccaataccg atacgaccaa
     9481 catagtcatt ataatcaagt aatgatactt ggaattgtaa tggttcgtcg ctattatcaa
     9541 ctggagccgg gatatgttcg ataattgtgt ctaaaagtgg tttcattgtt tctttttgtt
     9601 ctgctggatc agaatcatag cttgaagttc cgttgattgc agaagcataa acaactggga
     9661 attctaattg atcgtcgttc gcacctaatt cgatgaataa ttctaatact tcatcaacaa
     9721 cttcttctgg gcgagcaaaa tcacggtcaa ttttgtttac tacaacgatc ggtgttaagt
     9781 tttgttctag tgcttttttt agtacaaaac gtgtttgagg catagtacct tcatacgcgt
     9841 ccactactaa aagaacacca tctaccattt tcatgatacg ttctacttct ccaccgaaat
     9901 cggcgtgtcc aggtgtatcc atgatgttta cacgtgtatc ttcatactta atcgctgtat
     9961 ttttcgctaa aattgtaata ccgcgttctc tttctaaatc attgttgtcc attgcgcgtt
    10021 ctgcaactgt ttcattgtcg cggaatgtgc ctgactggcg tagtaattgg tctactagag
    10081 ttgttttacc atggtcaacg tgggcaataa ttgctacatt acgaatatca tttcttaaat
    10141 tcaatcttgt ttcctcctaa attaaaaatc caaacattta tcgtgaagat tagccaaaag
    10201 aaagaggaaa atagatttat tttcctccgt cgctatcgtc tcgtttaaat caacttacct
    10261 attatagcat agctgagcgg atttggcacg atttttattt tctgaaaaca agttttttta
    10321 tgttgagcgc tttctttaag gcaggtagtt atctaataag gtttgatgga tttttggcga
    10381 tgctacaata gaacttcctt tttctaacat attgattttt tcaccattaa tccgtgtcac
    10441 tttcccgcct aattcttcga cgataatttt tccagcagct atatcccacg gggctaaatt
    10501 agcagaaaga taggctcccg ctcgtccagt agcaacatcc atatattcca gtgaagctgc
    10561 tccgtgtaat cgtaatcctc tagaagcttt taccgcctcc cacatggttg ggaattttct
    10621 tgtcacgctc aaattagcaa ttaatagcgt atcttttagg tctattgctg ggtcaagttt
    10681 agggatagtt ctgccgttta ctgtagcacc ttttcctttt tctccaaaat acagctcatc
    10741 gcgtgcaacg tcataaatat aagcaagctg ccctattcca tcttcataaa ctgcaagtga
    10801 aatcgcaaaa tcgcgttgct gttcaacaaa attcaatgtc ccgtcaattg ggtcaagaat
    10861 ccaaaccact ccatctaaat ctgttacatc tgacgccatt ccttcttcac caaataaacg
    10921 atggtcagga aaatggtctt taatttgttg aacaaaaaaa gcttcggttt ctttatccat
    10981 attcgtcact aaatcatttc gaccggattt gacatcaatg tctagtgttt ctttgaaaga
    11041 ttgtttaatt ttcgctgcgg cttccatgat ccataacctt gctaaataat ctattttttc
    11101 gctgtccata aacacacctc ttcgcactct ttttgtttat tttatcacaa aaatgaatta
    11161 tctgaataga acaagattct ttcacttaga acttaacttc cgtataatga aactatatgc
    11221 aaaattagga ggaaaacaga tgacttttaa aggatttagt aagaaagatt ttaaaacaat
    11281 gcaaattcct gggcttgaag cacgtatgaa cggaattcaa acggatatcc aaccaaaatt
    11341 cagagctgtt ggggaagaat tgactactta tttaagtgcc aagcttggcg atgaaatgtt
    11401 tttacatatt gctcgtcacc aaagacgttc agttaaccca cccgaaagca cttggctggc
    11461 catttgccat gataaacgtg gatataaaaa gcaccctcat ttccaagtgg gtctattcga
    11521 taattattta ttcatttggc tcgcttttat ttatgaaaat gaagaaagcg cgaaaatcgc
    11581 caatcgcttc ttgaaagaaa agaaattatt ggctgattta ccggataact ttgccatttc
    11641 tccagatcac acagaggaaa agacgtatcc ggtacacgac ggacaactaa aggccacgct
    11701 tgaacgattc cgtgatgtga aaaaaggaga attcttagtt gggaaaattt atctaccaga
    11761 tgatagccat ttatccccag ggaaagactt cattaaagag gcagaaatgg tccttgacga
    11821 gctaattccg ctctataagg cttcccttca ataaaagatg tacaaatgac tataatctag
    11881 gtataatggt agagttgtga attactatgg tttgaaggag ttgaggaacg tgaaaaagga
    11941 gcagcaaaca gcaagtgacc ctggtccaca tcgaagtatt catacaggtg atttttcacg
    12001 ggaacgaaac tctaaccgcg tgaaatttac ctgttaaaaa aggaggtaaa aagcatgcat
    12061 caaattttca aatcagatga aaacggcaaa ttaattgaat tagaagaagt gacgcgcaat
    12121 tgttggatta atattgttgc tccaacttcc gaagaaatta ataaaattgc cgataactac
    12181 gaaattccac tagagttctt agaagatcca ctagataaag atgaaagtgc ccggattgaa
    12241 cgcgatgacg actcggattc cgttttaatc gtctgtgact ttccggtagt tgatgaagat
    12301 gatattcatt acgcttcatt cgaaaccatt ccaatgggga taattattac aaaggattat
    12361 tttattacaa t
//
LOCUS       DASDYK010000085        12333 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.085, whole genome shotgun sequence.
ACCESSION   DASDYK010000085 DASDYK010000000
VERSION     DASDYK010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12333)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12333)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12333
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.085"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..182
                     /locus_tag="U0308_002158"
     CDS             <1..182
                     /locus_tag="U0308_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEM2317119.1"
                     /translation="RIISDLSKGHTLLPGDVIATGTPSGVGKGMTPPTFLQAGDVVEI
                     TIDKIGTLTNKVRKS"
     gene            202..564
                     /locus_tag="U0308_002159"
     CDS             202..564
                     /locus_tag="U0308_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YisL family protein"
                     /protein_id="HEM2317120.1"
                     /translation="MWGYIHLISWVAIVVLTVTALLIYSKSTKSFTMLQMINRVFYIL
                     VILSGIMMVKYSIEQSWILAIFKILMGIIVIGVVEMLLSYRKQQKPTGMFLMIFVIVV
                     VITISLGFYLSGGYPLFN"
     gene            648..1550
                     /locus_tag="U0308_002160"
     CDS             648..1550
                     /locus_tag="U0308_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM2317121.1"
                     /translation="MSSKIVYKEYAKKTAIAIIAALLNAIGMNFFLIPAQVYAAGLNG
                     VAQLGSDMLRDSMNISISTGLLVLLLNIPVAILGWLKVGKSFTVFSFLTVAFMSFFLI
                     VIPEVQVSSDILLNAIFGALIASVGIGLALKFGISTGGLDIVAMYITIKTGRSFGKYF
                     LLLNGVIIIVAGFAYDWTFALYTLISLYVQSRVIDIIHTRHQKLTVMIMTQHSETVIK
                     AIHENMVRGITVVDAMGGYSKEDVAMLIMVITRYELYDITHIVGEFDSKAFINVMETS
                     SVFGDFRSEADQKLAMAMYKNKMM"
     gene            complement(1628..2473)
                     /locus_tag="U0308_002161"
     CDS             complement(1628..2473)
                     /locus_tag="U0308_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2317122.1"
                     /translation="MNQPYELKEQTMSKKLIVLDLDGTTLRDDLTISSHTKKTLEKAR
                     MAGHEVMIATGRPYRISGSYYHELGLTTPIVNFNGAVYHHPRLTTFAEGYHHAIDLQV
                     VHELLDFSNGFSLDNIAAEVQDNVFLKERNNSVPETFHLGTENIVFGNIRDAIKSDAT
                     SLLFFGKIDQLDLISKHLDESLSGVISHHTWGASAWPAVEIIKFGIHKAIGVQAAAKT
                     LGFDRKDIIAFGDETNDLQMLDYAGVGVAMGNAAESVKNVANVVTASNQDDGIALYLE
                     ENLNL"
     gene            2592..3344
                     /gene="yjfP"
                     /locus_tag="U0308_002162"
     CDS             2592..3344
                     /gene="yjfP"
                     /locus_tag="U0308_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HEM2317123.1"
                     /translation="MIQVENEQIAGIPVLHISNSENADQMLPTIIFYHGFTSQKELYL
                     HYGYLLAQRGFRVVLPDAKLHGERLQGANPEDQATFFWDVIETNIIEFPLITNELIKA
                     GKTDANRIGVGGVSMGAITSLGLLGQYENIKVAVSLMGSAYYVDFAKELSKYALAQGL
                     TFPYDVDERILTLQKYDLTQNITKINNRPLLLWHGKKDDVVPFAYSEKLYQTLVEESL
                     ADNVQFIIDDNAKHKVSVEGMLQGVSFFEKFL"
     gene            3409..3717
                     /locus_tag="U0308_002163"
     CDS             3409..3717
                     /locus_tag="U0308_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HEM2317124.1"
                     /translation="MDEQLKENLMGALEQVIDPELGIDIVNIGLVYDVELDDDGLCTV
                     SMTLTTMGCPLAGILTEQVQMALSDIPEVKDTNVNLVWNPPWTKDRMSRYAKIALGIR
                     "
     gene            3797..4672
                     /locus_tag="U0308_002164"
     CDS             3797..4672
                     /locus_tag="U0308_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2317125.1"
                     /translation="MNYEMISDYKDNKMYRDSFNKLAESTFDINFEEWFRSGFWNDKY
                     VCYSYIDNNEVISNVSINKMNLIYQGENYSALQIGTVMTHPNYRGQGLAKNLLNHVIA
                     KYEDQYDFLYLFANDTVLDFYPKFGFERIEESSFTVDACNLKKKASKLKKLNPDNKTD
                     FQLISRIVSKRAPLSNILDVKESEDLLMFYVLIALKNELYYLEELDVIVLMEQEGTDL
                     YVLDILSTKKLDVVEVLSYLSTKKIETIHLLFTPEKSKYIDAAYIIETEDMLFVRPNV
                     LTSENYFLFPATSHA"
     gene            complement(4663..5013)
                     /locus_tag="U0308_002165"
     CDS             complement(4663..5013)
                     /locus_tag="U0308_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2317126.1"
                     /translation="MEIQVEEAVVKLILHGGNTRKEAYKAIDFAEKYQFDEADKHLQI
                     AQDQFQEGHIWQTKLVSIRDSETVAHPSFLLIHGQDHLMTAQAELQLAKRIIKQYKHQ
                     QRIEERLTKLENQA"
     gene            5164..5355
                     /locus_tag="U0308_002166"
     CDS             5164..5355
                     /locus_tag="U0308_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317127.1"
                     /translation="MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPAARSSLLGHNV
                     WVLIPLVAIISWMVVEIFS"
     gene            5352..5696
                     /locus_tag="U0308_002167"
     CDS             5352..5696
                     /locus_tag="U0308_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317128.1"
                     /translation="MKGTFNGFLFICNIVIFIQKITIKVSQFSSFLSLSQKIYIYLLA
                     FFKNNSKISYRIEFYLDESFIFINVIFMGIRPYHGYNDFWCIHLPIEWQLVRHLFRHQ
                     NHYLFSFISLAV"
     gene            5860..6381
                     /locus_tag="U0308_002168"
     CDS             5860..6381
                     /locus_tag="U0308_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HEM2317129.1"
                     /translation="MTLKGKKVIALVSEDFEDLELWYPVLRLREAGASVHLVAEEAKK
                     VYHGKYGVPVTSDYDFDSVRAEDYDGILVPGGWSPDKLRRFDSVLNLVRAFDKAKKPI
                     GQICHAGWVLVSAGILEGVNVTSTPGIKDDMTNAGAIWHNEPVVTDGHIISSRRPPDL
                     PEYLPAFISALED"
     gene            complement(6424..6690)
                     /locus_tag="U0308_002169"
     CDS             complement(6424..6690)
                     /locus_tag="U0308_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317130.1"
                     /translation="MFLKSLLAGVALAVVVFLASFLMPDYTVSTLYSIVTTIIVFASI
                     ILSAFVSFGGRSGNPSRKSQLRWSILLLVAAIPSFIGFIVTFYF"
     gene            complement(6803..8095)
                     /locus_tag="U0308_002170"
     CDS             complement(6803..8095)
                     /locus_tag="U0308_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEM2317131.1"
                     /translation="MFQLKANGTDVKTEVISGFTTFLTMVYIVVVNPAILSAAGVPFN
                     TVFMATIISAVIGTLWMAIFANYPIAIAPGLGMNAYFVTVVTTQKLDYSVAFAAVFVA
                     GIIFLLLSLTPLREKIIEAIPHNLKAGITAGIGLFIAFLGFRMTGIIVSNDSNLVGLG
                     DLHSKEAILAIVGLLITLILLALNVKGALFIGMIATGIIAFITGELKFTEGIVKLPPM
                     PEFVFTNPIHAFGDVMSYGLYAVVLSFLLITIFDTTGTMIGVAKKAGLMKGESLPNAK
                     QALMADAVATSVGSMFGTTPTSAYIESSAGVATGGRTGLTTLTVAILFMVSAFFAPLV
                     GAVSGISAITAPALIVVGSMMIGAVKEIDWDTLDEAFPAFLVILAMPLTSSIAIGLAF
                     GFISYPVLKVFTGKWRELNWFLIVIAVLFFILVAFLPH"
     gene            8268..8897
                     /locus_tag="U0308_002171"
     CDS             8268..8897
                     /locus_tag="U0308_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM2317132.1"
                     /translation="MKAVVFDFDGTMLDTENLWYTETMNYLKETYDIDLPDEIYQQII
                     GTSEEPIIRYMMEATNGAFDKEAFLTTVAEACHLGQQSLGFRDGFKEFFEQVKANDFK
                     IGLATSSGFDWIGPTLDRLGILADFETIQTADHVDEIKPHPALYLQAVEALGVKPEEA
                     IAIEDSKNGALSAMQAGLKVYIVPNEATKNITFPKEATVVSSFAEINLK"
     gene            complement(8941..10089)
                     /locus_tag="U0308_002172"
     CDS             complement(8941..10089)
                     /locus_tag="U0308_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM2317133.1"
                     /translation="MNNSKIAKKHQQMPVNILADIGTLAKTMPDILDLSIGDPDLITD
                     ESIINAAFEDVRAGHTKYTESGGDVELIDAIRGYFSRNYDLSFERSQIRATVGALHGM
                     YLTLQTILDDGDEVIIHEPYFSPYKDQVLNSGGTPIIIPTYEKDDFAINVDILEAAIT
                     DKTKALILNSPNNPTGAVFSPETFEKIANLAKKYDFFILSDEVYDGFSFYEDFVPMAK
                     FAPDHTITFGSMSKNFAMTGWRLGYMIAPTYLNEAAKIINEGITYSAPTPSQRAAIYA
                     LNHSETLIPLVTETFQKRLEYIAKRVEEIPYLSLHPLKGSIYAFINISKTNMDSVSFT
                     EYVLKETQVLVIPGLAFGESGDNYVRLAATQDISVLEEAFNRLAKLTF"
     gene            complement(10165..10890)
                     /locus_tag="U0308_002173"
     CDS             complement(10165..10890)
                     /locus_tag="U0308_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM2317134.1"
                     /translation="MIDIKNLHKHFGKLEVLKGIDLEIASGEVVVVIGPSGSGKSTFL
                     RCLNLLEQPTTGTILFENKDLMAKQTNVNELRQKMGMVFQNFNLFPHKNVLENLMLAP
                     MKVKNEDSAAAKKHALSLLEKVGLADKATSYPSQLSGGQQQRVAIARALAMNPDVMLF
                     DEPTSALDPEMVGEVLSVMKSLAKEGMTMVVVTHEMGFAREVADRVVFMDAGVIQEQG
                     TPEEVFGNPQNDRTKDFLGKVLA"
     gene            complement(10883..>12333)
                     /locus_tag="U0308_002174"
     CDS             complement(10883..>12333)
                     /locus_tag="U0308_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465774.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEM2317135.1"
                     /translation="LLQKIAAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVG
                     LSADYPPYEFHQTIDGKDKVVGFDVSIAEKIAKDLDVKLEIKEMNFDSLLGSLKTGKI
                     DMIISGMSPTPERQKEVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTT
                     QEELAQNELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIK
                     FANGSKETAIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLMFQDGSFYEKYG
                     NYFITGTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQ
                     IFIVFFGTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMT
                     QGASMRYIILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPF
                     IPLIITSLIYFVLTFSLSRLLGVAERRMRTSD"
BASE COUNT         3891 a         2076 c         2473 g         3893 t
ORIGIN      
        1 ctaggattat ttctgattta tcaaaagggc atacattgtt gcctggggat gtgatagcta
       61 caggaactcc aagtggtgtg gggaaaggca tgacacctcc aacttttctg caagctggag
      121 atgttgtcga aattactatt gataaaattg ggacactgac taacaaagta agaaaatctt
      181 aataagaaag agggatgtat tatgtggggt tatattcatt tgatttcatg ggtggctatt
      241 gttgtactaa cagttacagc tttactcatt tattcgaaat cgacaaaaag ttttacaatg
      301 ttgcaaatga tcaatcgagt tttttatatt ctggttattt tgagtggaat tatgatggtc
      361 aaatacagca tagagcaaag ttggattctg gcaatattta aaattctgat gggaatcatt
      421 gtaattggtg tagtggagat gctacttagt tacaggaaac aacaaaaacc aacaggaatg
      481 tttttgatga tttttgttat tgtcgtagtg attaccatct cattaggctt ctatttatca
      541 ggcggatatc cattatttaa ttaaaaatca aaaaaataat aaaaaagact tctcttttct
      601 ctagaaagtt ggtatgttat gttagggcca aaaaaggaga gaagaaaatg agttcaaaaa
      661 tagtatataa agagtatgct aaaaaaaccg ccattgcaat aatagcagca cttttaaacg
      721 caataggcat gaacttcttt ttaataccag cacaagttta tgcagctgga ttaaatgggg
      781 ttgcacaact aggttcagac atgttacgag attcaatgaa tatttctatt tcaacaggac
      841 tacttgttct gttattaaat attccagtgg cgattttagg gtggttaaaa gtaggaaaat
      901 catttactgt ttttagtttt ttaacagttg cttttatgtc ctttttcttg attgttatcc
      961 cagaggtgca agtatctagt gatattttgc ttaatgcgat ttttggggct ttaattgcat
     1021 ctgtaggtat tggtctggct ttgaaattcg gtatttctac tggcggatta gatatagtag
     1081 caatgtatat cactattaaa acagggcgtt cttttgggaa atatttcttg cttttaaatg
     1141 gagttattat aattgttgca ggttttgcat atgattggac atttgcgcta tacacgctca
     1201 tttctttata tgttcagagt agagttattg acattattca tacaagacat cagaagctga
     1261 ctgtcatgat aatgacacaa cactctgaaa cagtaatcaa agcaatccat gagaacatgg
     1321 tacgaggaat tacagttgtg gatgcgatgg gtggttattc aaaagaagac gtagcaatgc
     1381 tgattatggt gattacgcgt tatgaactat atgatattac gcacattgtt ggcgagtttg
     1441 actctaaagc atttattaat gttatggaga cctcaagcgt attcggtgat tttcgttcag
     1501 aagcagatca aaaattagca atggcgatgt ataaaaataa aatgatgtaa aaaagctgca
     1561 aagtaatggc tcttgaatca aaaattagta ttcctaactt ttgtaagacc ttacttgcag
     1621 ctttttatta taagtttaaa ttttcttcta aatagagtgc tataccatca tcttgattag
     1681 aagcagttac cacgtttgcc acatttttaa cagactcggc agcatttccc atagcaaccc
     1741 caacaccagc gtaatcaagc atttgtaaat cattcgtttc atcgccaaat gcaatgatat
     1801 ctttacgatc aaagccgagt gttttagccg ctgcttgcac gccaatagct ttatgaatac
     1861 cgaatttaat aatttcaacg gctggccaag cagatgctcc ccatgtatgg tgagaaataa
     1921 cgccggaaag agattcatcc aagtgtttgc taattaaatc aagttggtca atttttccaa
     1981 aaaacagtaa agaagtagca tctgatttaa tagcatcacg gatgtttcca aagacaatat
     2041 tttcagtgcc taagtggaat gtttcaggaa cgctgttgtt tcgttctttt aagaagacat
     2101 tatcttgcac ctctgctgcg atattatcta atgaaaagcc gtttgaaaaa tcgagtaact
     2161 catgaacaac ttgtaaatca atggcatgat gatagccctc agcgaaggta gtaagtctag
     2221 gatggtgata gacggcaccg ttgaaattta caatcggcgt tgttaatccg agttcatggt
     2281 aataagagcc acttattcga tatgggcgtc ccgttgcaat cattacttcg tgaccggcca
     2341 tgcgggcttt ttctaaagtt ttttttgtat gggaggagat agttaaatca tctctaagtg
     2401 ttgttccatc aagatctagt acgattaatt ttttagacat agtttgctcc tttaattcat
     2461 atggttggtt caaagctgcc ccttcatgct aaaataaggg cacacatcaa tgatagacgt
     2521 ttatcacaaa tttgtaaatg attccgacct ttacagtagc ttaataaact caatagaaat
     2581 gaggcttcac aatgattcaa gtggaaaatg aacaaattgc gggaatacca gttttacata
     2641 ttagtaatag tgaaaatgct gatcaaatgt taccaacgat tattttttat catggattta
     2701 cttctcaaaa agaattatat ttacattatg gttatctact tgcgcagcgt ggctttcgag
     2761 tagttttgcc ggatgcaaag ttgcatggtg agcgtctaca aggagcgaat ccggaagatc
     2821 aggctacatt cttttgggat gttattgaga caaatattat agaattccct ctaattacta
     2881 atgaattaat taaagctgga aaaacggatg ctaatcgtat tggagttggc ggagtttcca
     2941 tgggagctat tacttcgctt ggccttcttg ggcaatatga aaatattaaa gtagcggtca
     3001 gtttaatggg aagtgcttat tacgttgatt ttgctaagga gttatctaaa tatgcattgg
     3061 cgcaagggtt aactttcccg tatgacgtgg atgagcgaat tttaacttta caaaaatatg
     3121 atttgaccca aaatatcacc aaaataaata accgaccatt gttactttgg catggcaaaa
     3181 aagacgatgt ggtacctttt gcgtacagcg aaaagttata ccaaacatta gtagaagaaa
     3241 gcttggcaga taatgtgcaa tttatcatcg acgacaatgc gaaacacaaa gtttcggtcg
     3301 aaggaatgct acaaggtgta agctttttcg agaaattctt ataatgaaaa tcattctcat
     3361 atatgataca ataaatgtac aaaatggcaa aaaggaggca tatgcttcat ggatgagcaa
     3421 ctgaaagaaa atttaatggg cgcactagaa caagttatcg atccagaact tggaattgat
     3481 attgtgaata ttggtcttgt atacgatgtt gaattagatg atgacggcct ttgcacagta
     3541 tcaatgacgc ttacaacaat gggatgtcca cttgctggta ttttgactga gcaagtacaa
     3601 atggcactta gtgatattcc agaagtgaaa gatacaaatg taaatcttgt ttggaatcca
     3661 ccttggacta aagatcgtat gtcacgctat gcaaaaatag cgcttggtat acgttgaatt
     3721 aaataaaaat aagcaggtag gacgtatttt gcgttatacc tgttattttt atatgactga
     3781 atagaggatt aaaacgatga attatgaaat gataagtgat tataaagata ataaaatgta
     3841 tcgtgatagt tttaataaac ttgcggaaag tacatttgac attaattttg aagaatggtt
     3901 tagaagcggt ttttggaatg acaagtatgt ttgttattct tatatagata ataatgaagt
     3961 tatctcgaac gtctccatta acaaaatgaa tttaatttat caaggggaaa attatagtgc
     4021 gttacaaatt ggaacagtaa tgacgcatcc gaattaccgt ggacagggtc ttgctaagaa
     4081 tttattaaat catgtgatag ctaagtatga agaccagtat gattttcttt atttatttgc
     4141 aaatgatact gtattggatt tttacccgaa atttgggttt gaacgtatag aggaaagtag
     4201 ttttactgta gatgcttgca atttgaaaaa aaaagctagt aaattaaaaa agctgaatcc
     4261 cgataataaa acggattttc agctaattag tcgtattgta tccaaaagag caccactttc
     4321 taacatatta gatgtcaaag aaagtgaaga tttactgatg ttttatgtat taattgcgtt
     4381 aaaaaacgag ctttattatt tggaagaatt agatgtaatt gttctgatgg aacaggaagg
     4441 tactgatcta tatgtactgg atattcttag tacaaaaaaa ctagatgtgg tggaagttct
     4501 aagttatctt tctaccaaaa aaattgaaac aatccatctt ctttttacgc cagaaaaaag
     4561 caaatacatt gatgcggctt atatcattga aacggaagat atgttgtttg tgcgtccaaa
     4621 tgtgcttaca agtgaaaatt acttcttatt tccagcgacc tctcacgctt gattttcaag
     4681 tttagtaagt cgttcttcga tacgttgttg atgtttgtat tgtttaatga ttcttttggc
     4741 aagttgcaat tccgcttgtg ccgtcattaa gtgatcctgc ccatgaataa gtaaaaagga
     4801 aggatgagct accgtttctg agtcgcgaat ggatactaat tttgtttgcc aaatatgacc
     4861 ttcttggaat tgatcctgtg cgatttgcag atgtttatcg gcttcatcaa attgatactt
     4921 ttccgcaaaa tcaattgctt tgtatgcttc ttttcgtgtg tttccgccat gcaaaatgag
     4981 ttttacaaca gcttcttcta cttgaatttc catttttcca ccccaacagt tgatagtttt
     5041 ctttcattgt agcaaatgcc tgaacggtat gacaataaat tagcaataaa tcagcctatg
     5101 gaacgatgtg tttcatggag cttagcgtat aataggcaat agaaaaggtg tggagggatt
     5161 caaatggaag aacgtttata cgaacttgaa gataaagtac aagaccttga gcttgaagtg
     5221 catgatttgc gtgatagaat tcaactgctc gaagacaaac cagctgctcg ctctagctta
     5281 cttggtcata atgtatgggt cttaattcca ttagtcgcta ttatttcttg gatggttgta
     5341 gaaattttta gttgaagggg acctttaatg gtttcctttt tatttgtaat atagtaattt
     5401 ttatacagaa aataacaata aaagtaagcc agttctcatc tttcttatct ttgtcacaaa
     5461 aaatctatat ttatttactt gcttttttca agaacaatag taaaataagt tataggatag
     5521 agttttacct cgatgaaagt ttcattttta ttaatgtgat tttcatgggg ataagaccct
     5581 atcatggtta taatgacttt tggtgtatcc atcttccaat agaatggcaa ctagtcagac
     5641 atctgtttag acaccaaaat cattatttgt tttcattcat ctcattggcc gtgtagttca
     5701 tgtctatgcc tcatcccgtt atgcatagac gcccgaacat gatggcaacg ctggaaatgt
     5761 ttatttcgag cgtctttttt tgtcttcttt tataggcgga ataatttaat aacattctag
     5821 ttattgttat actgtagaag aggataggag gagatttata tgactttaaa aggtaaaaaa
     5881 gttattgcac ttgtcagtga agactttgag gatttagagc tttggtatcc agtgcttaga
     5941 ttgcgcgagg caggagcttc ggtgcatcta gtggctgagg aagcaaagaa agtttatcac
     6001 ggtaagtacg gagttcctgt tacttctgac tatgattttg attctgttcg cgcagaagat
     6061 tatgatggga ttttagttcc aggtggctgg tccccagaca aattacgccg ttttgatagc
     6121 gtactaaatt tggttcgtgc gtttgataag gcgaaaaaac caattggaca aatttgccat
     6181 gctggatggg tacttgtttc ggctggtatt ttagaaggcg tgaatgtaac aagtacaccg
     6241 ggaattaaag atgatatgac gaatgcggga gctatttggc ataacgagcc tgttgtaaca
     6301 gacggccata ttatttcgag tcgtcgccca ccagaccttc cagaatattt accagcattt
     6361 atttccgctt tagaagatta aaaaaagaag catttccata ttttgggaat gcttcttttt
     6421 agtttaaaag taaaaagtta cgataaagcc gataaaacta ggaattgctg caactaaaag
     6481 caggatactc cagcgtaatt ggctttttcg acttgggttt ccactacggc caccaaagga
     6541 tacgaatgcg gatagaataa tggatgcaaa gacaatgata gtcgttacaa tggaatataa
     6601 agtggataca gtgtagtcag gcatcaaaaa gcttgctaga aaaacaacaa cagcaagtgc
     6661 gacaccagcg agcagtgatt ttaaaaacac gacaagttca actcatttct aattagtttc
     6721 tctcttcttt atagcaaacg agcgggtttt tgtccaataa aaaagcgcct agctgagttc
     6781 agtagacgct tttattcatt gattaatgtg gtaaaaatgc tacgagaatg aagaataata
     6841 cggcgataac gattaggaac cagttaagtt cacgccattt accagtgaat acttttaata
     6901 ctgggtaaga aataaatccg aatgctaagc cgattgcgat gcttgaagta agtggcatag
     6961 ctagaataac taagaaagca gggaatgctt catctaatgt atcccagtcg atttctttaa
     7021 cagcaccaat catcatacta ccaacaacta taagtgctgg tgcagtaata gcagaaattc
     7081 cagagacagc accaacaagt ggagcgaaga atgctgatac catgaacagg atagcaactg
     7141 taagtgtagt aagaccagta cgtccaccag ttgcaacccc agcagaagat tcaatgtaag
     7201 cacttgttgg tgttgtacca aacatcgaac caacacttgt tgcaaccgca tcagccatta
     7261 aggcttgttt cgcatttggt aatgactcac ctttcattag gccagctttt tttgcaaccc
     7321 cgatcattgt tccggttgta tcaaaaatcg ttataagtaa gaaggacagg acgacagcat
     7381 agagcccgta actcatcaca tcaccaaaag cgtgaatagg attagtgaag acgaattctg
     7441 gcattggcgg aagtttaacg ataccttctg taaatttcag ttcaccagtg ataaaagcaa
     7501 tgataccagt tgcaatcatc ccaataaata aagcaccttt tacgtttaaa gcaagcaaga
     7561 ttaaagtgat taaaagacca acaatagcta aaatagcttc tttggaatgt aaatcaccta
     7621 aacctactaa gttagaatcg ttagaaacaa taatgcctgt catacggaag ccaaggaaag
     7681 cgataaataa accaatacca gcagtaatcc cagcttttaa attatgtgga atagcttcaa
     7741 tgattttttc acgaagcggt gttaaagata ataataagaa aataatacct gctacaaaga
     7801 ccgcagcgaa tgcgaccgaa taatctagtt tttgagttgt aactactgtg acgaagtaag
     7861 cgttcatacc aagtcctggc gcaatcgcga ttggatagtt agcgaaaatt gccatccata
     7921 atgtaccgat tactgctgaa atgattgttg ccatgaatac agtgttgaat ggaacacctg
     7981 ctgcggaaag aattgcgggg ttaactacta cgatatatac catcgttagg aatgtagtaa
     8041 aaccagagat aacttccgtt ttaacatctg tgccgtttgc ctttaattga aacatgcgtg
     8101 tgtttcactc cttttttaaa atcatgctta atggtaaata acgaacatta aaaaccacaa
     8161 atacaatatt attcgttttt tactaaaaaa gcaacccttt ttcgaagatt tcttaaatag
     8221 tttatctatg ttacaatgaa aatatcactt atactaggag gatgcatgtg aaggcagttg
     8281 tttttgattt tgatggaact atgcttgata cggaaaattt atggtataca gagacaatga
     8341 actatttgaa agagacgtac gatattgatt taccagatga aatttatcaa caaattatcg
     8401 gtacaagtga agaaccaatt attcgctata tgatggaagc aacgaacggg gcttttgata
     8461 aagaagcttt tttaactact gtggcggaag cttgtcatct tggtcaacaa tcacttggct
     8521 ttcgtgatgg ttttaaagaa ttttttgaac aagtaaaagc gaatgatttt aaaataggcc
     8581 ttgcaacgag ttcgggattt gactggattg ggcctacgct ggatcgtctg ggcattttag
     8641 ctgattttga gacgatacaa acggcagacc atgtggatga aattaagcca catccggcac
     8701 tttacttaca agcagtagaa gcgcttgggg ttaaaccaga agaagcaatt gctatagaag
     8761 attccaaaaa tggtgcgcta tcagcaatgc aggctgggtt aaaggtgtat atcgtaccga
     8821 atgaagctac aaaaaacatc acttttccaa aagaggcgac ggttgtttct tcttttgcag
     8881 aaatcaattt aaaatagaaa aaagagcaaa cttgcctatg aagcgagttt gctctttttg
     8941 ttaaaaggtt aatttggcta gacggttaaa tgcttcttct agcacgctaa tgtcttgggt
     9001 tgcagctagg cgaacataat tatcaccaga ttcaccaaaa gctagcccag gaatgacgag
     9061 gacttgtgtt tcttttaaga catattctgt aaatgaaacg gaatccatat ttgttttaga
     9121 aatattaata aaggcgtaaa tcgaaccttt aagtggatgt aaagaaagat atgggatttc
     9181 ttccacccgt tttgcgatgt attctaggcg tttttggaaa gtttctgtta ctaaaggaat
     9241 tagtgtctca gaatgattta atgcgtaaat agcagctctt tgggacggtg taggagctga
     9301 ataagtaatt ccttcattaa taatctttgc agcttcgttt aaataagtag gagcaatcat
     9361 atatcctaag cgccaaccgg tcattgcgaa gtttttagac atactaccaa atgtaatcgt
     9421 gtgatctggc gcgaatttgg ccattggtac gaagtcttca taaaaactaa aaccatcata
     9481 tacttcatcc gacaaaataa aaaagtcata ttttttcgct agattagcaa ttttttcaaa
     9541 ggtttccggt gaaaaaacag caccggtggg attattaggt gaatttaaaa ttaaagcttt
     9601 tgttttatca gtaatggcag cttctaaaat atcgacatta atcgcaaaat cgtctttctc
     9661 ataggttgga ataatgatag gagtaccacc ggaatttaac acttgatctt tatacgggga
     9721 gaagtagggt tcgtgaataa tgacttcatc gccgtcgtcg agaatggttt gcaaggttag
     9781 gtacatacca tgaagcgcgc caactgtagc gcggatttgg ctgcgttcaa aagacaaatc
     9841 ataattacga ctaaaataac cacgaatagc atctatgagt tctacatctc caccagattc
     9901 tgtgtatttt gtatggcctg cccgtacgtc ttcaaaagcg gcattaataa tcgattcatc
     9961 cgtaattaaa tcaggatcac caatggataa atcgagaata tcaggcattg ttttggcaag
    10021 tgtgccaata tcagcaagaa tgttcacagg catttgttga tgttttttag caatttttga
    10081 gttattcatc atgtataatt agctcctttt ttctataagt gcagataaac gcctcaccta
    10141 aaataggcga gacgtaatct ttggttatgc taaaactttt cctaaaaagt cttttgtacg
    10201 atcgttttgc gggttcccga atacttcttc gggcgtgcct tgttcttgaa tcacgccagc
    10261 atccatgaag acaacgcggt cggcaacttc tcttgcgaag cccatttcgt gcgttacgac
    10321 aaccatcgtc ataccttctt tagcaagcga cttcataacg cttaatactt caccgaccat
    10381 ttcggggtca agtgcggaag ttggttcatc gaatagcatt acgtcaggat tcattgcgag
    10441 tgctcgggca atggctaccc gttgttgttg tccaccagaa agttgggaag ggtagctagt
    10501 tgctttatca gctagaccga ctttttccag tagagaaagc gcgtgttttt tcgcagctgc
    10561 actatcttca ttctttactt tcataggcgc taacattagg ttttcaagaa catttttatg
    10621 cgggaataag ttgaagtttt ggaaaaccat gcccattttt tgacgaagtt cgttgacgtt
    10681 ggtttgtttt gccattaggt ctttgttttc aaaaagaatc gtgccggttg ttggttgttc
    10741 taataagttc aggcaacgta agaaagtact ttttccgctt ccggaagggc cgataactac
    10801 gaccacttct ccagatgcga tttcaagatc aatacctttt aagacttcta atttgccaaa
    10861 atgtttgtgt aaatttttaa tatcaatcac ttgttctcat tctcctttca gcaacaccta
    10921 gtagtcttga taagctaaat gttagtacaa agtaaattaa tgatgtgata attagtggga
    10981 taaatggctt gaagcttgcg ccttggacta cgccggtcat aaacattagt tctgttacac
    11041 cgataacgga tacgatggaa gattctttaa taacagtgac gaattcattc ccaagagcag
    11101 gaagaatatt tttcacggct tgcggtaaga tgatgtaacg catgctagcg ccttgtgtca
    11161 taccaaggga acgagctgct tccatttgac ctttgttgac agcagaaata cctgcgcgga
    11221 taatttcagc aacataagcg gcactgttta gcgatagggc gatacaacca gaaacaaagg
    11281 cggatacgtc cataccgata atttgagttc cgaaaaagac gatgaaaatt tgaattagaa
    11341 gtggcgtacc acggacaaat tcaatataac atgctgctgg ccagcgtaac catcttgttt
    11401 tcgccagttt catgagcgct agtaatgagc cgagaatggc accacataat acgccaatag
    11461 cggcaagggc aatagtgatt aatgtaccag tgataaagta attaccatat ttctcgtaaa
    11521 agctaccatc ttggaacatt aatttattgg cttctttttg atattttttc agtaagccgg
    11581 tatcttgtat atctttaata gaagcgttga ctttttcttg taaagctgta gaaccttttg
    11641 gcattgcgat ggcggtttct ttgctaccat tagcaaattt gatatccgcc atagcgagtg
    11701 tcttatcttg actaatataa gcttcagcaa ctggaccttc taaaacaacc gcatcgactt
    11761 tgttgctttt aaggttaaga ataaggtccg gtactttttg aagggaaact acttctgaac
    11821 caactagctc attttgagct aattcttctt gtgtcgtttg tttttgggca ccaactttca
    11881 cgccactaaa atcattcaca cttgtaaatt tatctttatc tgtctttcta atcacaacac
    11941 gttgctgaac gaacatgtat ggatcagaga aatccacttc tttttgacgt tcgggtgtag
    12001 gtgacatccc ggaaataatc atatcaatct tgccagtttt tagtgagcca agcaagctgt
    12061 cgaaattcat ttctttaatt tctaatttaa catctaaatc tttggcaatt ttttccgcaa
    12121 tacttacatc aaaaccaacg actttatctt taccgtcgat tgtttgatga aattcatacg
    12181 gtggatagtc agcggaaagg ccgaccgtta aaacaccttt ttcttgaatt ttagctaaag
    12241 tttgatcttc tgtatcagcg gcgaacacag ttgtgaagcc agaaaataca actataaaaa
    12301 caagtaaaat tgctgcaatc ttttgtaata aat
//
LOCUS       DASDYK010000086        12313 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.086, whole genome shotgun sequence.
ACCESSION   DASDYK010000086 DASDYK010000000
VERSION     DASDYK010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12313
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.086"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            58..684
                     /locus_tag="U0308_002175"
     CDS             58..684
                     /locus_tag="U0308_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEM2317136.1"
                     /translation="MLHTLIQSLQDFTMWLVDSLGHWGIFLGMLIESVCIPLPSEVIM
                     LFGGFMAEAGKLNFWLVVFAGIAGNFVGSLIAYYIGKFGGRALVLKFGKYIFLNVKHL
                     DKAELWFGRYGARAVFFGRVLPVIRTFISLPAGIAKMNVWKFVIYTILGCIPWNIFLT
                     WLGYSLGSNWSVVEKYTRPISYLMLALVIAIVVYLAYKVWNKRARNAK"
     gene            complement(730..1032)
                     /locus_tag="U0308_002176"
     CDS             complement(730..1032)
                     /locus_tag="U0308_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1292 domain-containing protein"
                     /protein_id="HEM2317137.1"
                     /translation="MAEEHNHNHEEENIIWITNEEGKEEAYEILFDFDSEDFDKSYVL
                     YFPAGKGEDEEIEILASSYIQDEEGKQGQLKPVETDEEWDMIEEILATFLADEDEE"
     gene            complement(1048..1464)
                     /gene="ruvX"
                     /locus_tag="U0308_002177"
     CDS             complement(1048..1464)
                     /gene="ruvX"
                     /locus_tag="U0308_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEM2317138.1"
                     /translation="MRIMGLDVGSKTVGVAISDPLGWTAQGVETIQIDENRKQFGYDR
                     VKELVLEYEVEKVVVGLPKNMNNTIGPRAESSKIYAEVLESRIGLPVVLWDERLTTSA
                     AERTLIEADVSRKKRKEVIDKLAAVMILQSYLDTTN"
     gene            complement(1461..1733)
                     /locus_tag="U0308_002178"
     CDS             complement(1461..1733)
                     /locus_tag="U0308_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IreB family regulatory phosphoprotein"
                     /protein_id="HEM2317139.1"
                     /translation="MDSKDQTMFYNFGDDSIEEDVKKLMKQVYVALEEKGYNPVNQIV
                     GYLLSGDPAYIPRHKDARSMIRRLERDEIIEELVKAYLKNNEIGEK"
     gene            complement(1825..4464)
                     /gene="alaS"
                     /locus_tag="U0308_002179"
     CDS             complement(1825..4464)
                     /gene="alaS"
                     /locus_tag="U0308_002179"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEM2317140.1"
                     /translation="MKQLSSAEVRQLFLDFFKEKGHTIEPSAPLVPNNDPTILWINSG
                     VATMKKYFDGSVIPDNPRMANAQKSIRTNDIENVGKTARHHTFFEMLGNFSIGDYFKE
                     GAIVFAWEFLTSPKWIGFDPDKLYVTVYPEDEEAKTLWREKIGLSDDHIVEIEDNFWD
                     IGIGPSGPDSEIFYDRGPAFGDDASDPELYPGGENERYLEIWNLVFSQFNHNPDGTYT
                     PLPKQNIDTGMGLERMVSIIQDAPTNFETDLFMPIIREVEQIAGVKYGHSQENDVAFK
                     VIADHIRTVAFAIGDGALPSNEGRGYILRRLLRRAVRYAKVLTINEPFMYKLVPVVGK
                     IMNSFYPEVENQTDFIQKVIRTEEERFHETLNEGLAILETILKTAKETNEQIIKGADI
                     FKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQRDRARSARADVKSMQVQGELL
                     ANLTEKSAFVGYNSTEHVSEILYLIQDDTLVEEVAAGSEAQVIFKETPFYAESGGQVA
                     DKGTIESETGLAYVEDVQKAPNKQNLHRISVKEGVLKTGDTVKLAVDKVKRRETIKNH
                     TATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQITEEELTKMEEIVNEKIWE
                     QINVVIEEMPIAEAKELGAMALFGEKYGDIVRVVQVGKYSIELCGGVHVRNTADIGLF
                     KIVSETGIGAGTRRIEAVTGKEAYRFVTEQENTLKQAASLLKTTTKETPQKVEQLQAD
                     LREVKRENESLLSKLASAASADIFESPEEIGGVKVIAKQVNAKDMNQLRQFVDNWKDK
                     KIGGILVLGAVQGDKVNLISAVSEEAIKAGYHAGKLLKEVATRCGGNGGGRPDMAQAG
                     GKNPAELGTALDYVSTWVKEQQA"
     gene            complement(4771..5466)
                     /locus_tag="U0308_002180"
     CDS             complement(4771..5466)
                     /locus_tag="U0308_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317141.1"
                     /translation="MTKVLTFENISYWYKTKEESILSDINYDFEAGVFYTVVGSSGSG
                     KTTFLSLAGGLDTQKEGDIFYKGSSLKSIGLQQFRNKYVSIVFQSYNLLTYMTALQNV
                     TTAMEITHVNQPDKKAFALSMLEKVGITEDMARQKVLTLSGGQQQRVSIARALCCETE
                     LIVADEPTGNLDERTSKEVVTLFQDLAHKEGKCVIMVTHDPEIAKVSDVKLTLKNGSF
                     VEKKQSTNSLINS"
     gene            complement(5475..6974)
                     /locus_tag="U0308_002181"
     CDS             complement(5475..6974)
                     /locus_tag="U0308_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317142.1"
                     /translation="MNFFKRAWLSMKARKGRSVLQLIIFTVVCVLILSGFTIQSAADK
                     ASELAREQLGGTVTLTVDREKQMQTMRDEASSSDSSSTESKPQFQSSPIDVSDANDLA
                     KLNHVASYNYYSSTQALASGFDPIESSGDTSSSSDESSTTTETQGPGGGQGGPQMVDA
                     DLSISGLLDSATSTDFEAGTSELTSGVAITSADKDKNVAMVEENLAEENDWKVGDSFT
                     VTSSDGNTKVTLKIVGIYKTTDSGSDMAQNFSFLNPYNKVYVPYTVANTIKGSDYKNT
                     VDSAVYTMDDAANISAFEKEAKKVDSIDWDTFKLDANDTLYQQMIGPINSVASFSKNV
                     VYIVSIAGALILGLLVMMQVRDRKYEMGVLLAIGEKRGKLIAQFFVEILIVALVSFGL
                     AAASSHYVAQLAGNQLLAQQNSSTTETTSSTENRGPGGGQGGPGGFGESVSNLTKNTE
                     QIKELDIQVTLEDMLKMGGIGIGIAFISVLLPAALVLRMNPKTILTKQE"
     gene            7141..7827
                     /locus_tag="U0308_002182"
     CDS             7141..7827
                     /locus_tag="U0308_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2317143.1"
                     /translation="MKLLMIEDNVSVCEMIEMFFMKEEIDATFVHDGKQGYEAFFKDE
                     YDIAIIDLMLPNMDGMTICRKIREVSDVPIIILTAKESESDQVLGLEMGADDYVTKPF
                     SPLTLMARIKAVTRRKNSATSTENNEDILETTYFKISKRTREIFYQGELLDALTPKEF
                     DLLYFLMQHPRQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRQKIATETKPFLHTVW
                     GVGYKFDETE"
     gene            7824..9263
                     /locus_tag="U0308_002183"
     CDS             7824..9263
                     /locus_tag="U0308_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEM2317144.1"
                     /translation="MKRMKFKYAYQLFFTQFIILLIACIMIGVLVSHSLKDYFYQSQV
                     DDLTSYGQTISRDIRYSPQDATMQVLNTYQRILDVKKIHYTIKNANDETIYPTQMNQP
                     LPKDFSISSDDKKKLESGETVSKKIDNRFNKEMTIVYVPIMNGDKFVGSIVLNSPISG
                     TEQVIGTINRYMFYTILLSITVALILSAILSKLQVNRINKLRAATKDVIQGNYKARLK
                     ENNFDEIGALAIDFNKMTQTLETSQEEIERQEKRRRQFIADVSHEMRTPLTTISGLTE
                     GLVNDIIPKSETDRCIALIDTEARRLTKLVNENLDYEKIRSNKIKLQKTRFNGKEFLE
                     LIKEQLDYVSSEKGNTITVSIDKDMAIYADYDRLTQVFINIVKNSVQFTENGQITLTG
                     TQDYKESVLTITDTGIGMNTEELEQIWERFYKADMSRTNTAFGESGIGLSIVKQLIEY
                     HDGSITVTSEPNKGTSFTIRLPFFQDNEQ"
     gene            complement(9305..11701)
                     /locus_tag="U0308_002184"
     CDS             complement(9305..11701)
                     /locus_tag="U0308_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RecD-like DNA helicase"
                     /protein_id="HEM2317145.1"
                     /translation="MAEQESLALFNDTPEELFMKGTMLSTIFYNAENLFSVVRILVKE
                     TNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAKFGQQFKADRFRKEMPQSRAGLI
                     NYLSGELFKGIGKVTAENIVDTIGDDAITKILSDPSLLNTVPKLPSGAAESLLASLRE
                     NQGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDIKGIGFQRADEL
                     GRKLGLGGNHPERLRAGILFMLDSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQN
                     ILVAQVEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQTEYQEQFPQSEFLL
                     ALGELEERIGVHYGDSQRQALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVS
                     LDPHAYKDGATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLI
                     DGRLLIVDEMSMVDIWLANQLFRALPAHMQVVLVGDQDQLPSVGPGQVLKDILQSEQI
                     PTVALSDIYRQKDGSSIIEMAHYIKEGMLPADFTKNSADRSFFHCTVNQIGDVVEQVV
                     KNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGDIKYRVH
                     DKVLQLINQPEKNVFNGDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLT
                     HAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLIYTGVTRSKQFLILCGEEEAFRMG
                     IERIDENKRNTTLSERLMSEDVLLEQMTNKRILTAENITEIDPMIGMEGITPEQFMAG
                     "
     gene            complement(11729..>12313)
                     /locus_tag="U0308_002185"
     CDS             complement(11729..>12313)
                     /locus_tag="U0308_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEM2317146.1"
                     /translation="EHPSDPVGYINFGNVLLSMDDFERAELFFKRALELDDTVPAAYY
                     SLGNLYYELERYQEAADSFQNATKQGMENGDLFFMLGMSFVQMEELTLAMPYLLRSVE
                     LNPEDGEALFQYGIVLARSGFYEDAINMLERVLLVKPEDPDALYNIGAAYLAWQGDIV
                     LAKNYFERAIATGASHELAENALNAIQDLENEVE"
BASE COUNT         3520 a         2509 c         2197 g         4087 t
ORIGIN      
        1 agaatcagtc aaagacttgc ttctgccaat taattaaata ttgaaggagt cttttggatg
       61 ttacatacat taatacaaag tttgcaagat ttcacgatgt ggttagtaga ctcgcttggg
      121 cactggggta ttttcctcgg aatgctgatt gaaagtgttt gtataccgct accaagtgaa
      181 gttattatgc tattcggtgg atttatggcg gaagccggga aacttaactt ctggctcgtt
      241 gtttttgctg gtattgctgg taacttcgtc ggttcactga ttgcttacta catcggtaaa
      301 ttcggtggta gagctttagt attgaaattc ggaaagtata tattcttaaa tgtgaagcac
      361 ttggataaag cggaattatg gtttggtcgt tacggagcaa gagctgtatt tttcggccgt
      421 gttttgccag tcatccgaac atttatctct ttaccggctg gaattgccaa aatgaatgtc
      481 tggaaatttg ttatatatac gattttaggc tgcattccgt ggaatatttt tctgacatgg
      541 cttggttatt cattaggttc caattggagc gttgtggaaa aatatacacg accaattagc
      601 tatttaatgt tagctttggt tattgccatc gttgtctacc ttgcttacaa agtatggaat
      661 aaacgcgcta gaaatgcaaa ataaaaagca tgtcttgaca gtttttgtca ggacatgctt
      721 ttttaatttt tattcttcgt cttcgtcagc taagaatgtt gcaaggattt cttcaatcat
      781 atcccattct tcatctgttt caactggttt aagttgacct tgtttgcctt cttcatcttg
      841 gatatagcta gatgcaagga tttcgatttc ttcgtcttcc cctttgccag ccgggaaata
      901 taaaacataa gatttgtcaa agtcttcgga atcaaaatca aaaagaattt cgtaagcttc
      961 ttcttttcct tcttcgtttg tgatccaaat aatattttct tcttcatgat tatggttatg
     1021 ttcttctgcc attaaattca cctcaaatta attagtagtg tccagatagg actgtaaaat
     1081 cattactgca gctaacttat caatcacttc ttttcgtttt ttacgcgaaa cgtctgcttc
     1141 aatcaaagtt ctttcagcgg cagaagtggt caaacgttca tcccaaagta caacagggag
     1201 tccaattctt gactcaagta cttcagcata tattttggaa ctttcagcac gaggtccaat
     1261 agtgttattc atattcttag gtagtccaac tacgactttt tccacttcgt attcaagcac
     1321 gagctctttt acgcggtcat agccgaattg ctttctattc tcgtcaatct gaatggtttc
     1381 cacaccttgt gcggtccaac caagtggatc acttatcgct acgccgactg ttttcgagcc
     1441 gacatctaaa cccattattc tcatttctca ccaatttcgt tatttttcag atacgctttg
     1501 acaagttcct cgataatttc atctcgttct aaacgacgta tcatacttct agcatccttg
     1561 tgacgaggaa tataagctgg atcgcctgaa agtaaatagc caacgatttg atttacggga
     1621 ttatagcctt tttcttcaag agcaacgtag acttgtttca ttaatttttt tacatcttct
     1681 tcaattgaat catcgccgaa gttgtaaaac attgtttgat cttttgaatc cataatcgaa
     1741 gcacctcatt ccttcatgta tctcctttca ttttacacta tgtgaacgga aataacaaag
     1801 aaaaatgagg cactttgatg aaatttatgc ttgttgttct tttacccaag tagaaacgta
     1861 atcaagggct gttcctagtt ctgctggatt tttaccgcca gcttgtgcca tatcaggacg
     1921 tccaccacca ttaccgccgc aacgtgttgc cacttctttt aataatttac ctgcatggta
     1981 acctgctttg attgcttctt cagagactgc ggagattaag tttactttat cgccttgaac
     2041 agcgcctaaa acaagaatgc ctccaatttt tttatctttc cagttatcca cgaattgacg
     2101 taattggttc atatcttttg catttacttg ttttgcaatc acttttacgc cgccgatttc
     2161 ttctggtgat tcaaaaatat ccgcgcttgc tgcactcgct aatttactta atagtgattc
     2221 attctcgcgt ttcacttcac gtaagtcagc ttgtaattgt tctacttttt gcggtgtttc
     2281 tttggttgtt gtttttagta gactcgctgc ctgttttaat gtgttttctt gttctgttac
     2341 aaagcgatag gcttctttgc cagtaacagc ttcgatacgt ctagttcccg ctccgatacc
     2401 tgtttcggat acgattttga atagaccaat atcagctgta ttacgcacat ggacaccgcc
     2461 acatagttca atgctgtatt tgcctacttg tacaactcgt acgatatcgc cgtatttttc
     2521 gccaaatagt gccatagcgc caagttcttt tgcttctgct attggcattt cttcaatcac
     2581 aacattgatt tgttcccaga ttttttcatt cacgatttct tccattttcg ttaattcttc
     2641 ttctgtaatt tgaccaaaat gagagaagtc aaaacgtaaa cgatccggtg aaacaagaga
     2701 tccagcttgg ttaacatgct cgcctaatgt gtctttgagt gcgcggtgta aaaggtgtgt
     2761 tgctgtatga tttttgattg tttcgcgacg ttttacttta tcaacagcaa gtttcactgt
     2821 gtcgcctgtt tttaatacgc cttctttgac agaaatacgg tgtaaatttt gtttgtttgg
     2881 cgctttttgt acatcttcta cataagcaag accagtttcg ctctcgatgg ttcctttgtc
     2941 agcaacttgt ccgccgcttt ctgcataaaa tggtgtttct ttgaagatga cttgtgcttc
     3001 acttccagct gcaacttcct ccacaagcgt gtcatcttgg attaaataca agatttctga
     3061 aacatgctct gttgaattat agccaacaaa tgcacttttt tcggttaaat tagcaagtag
     3121 ttcgccttgg acttgcatcg attttacatc agcacgagcc gagcgagcac ggtcacgttg
     3181 ttctttcatt tctgcttcga agccagcgtg atccactttt aagccgtggt cttctgcata
     3241 ttcttctgtt aattctacag ggaagccgaa tgtatcatat aatttaaaaa tgtctgcgcc
     3301 tttgataatt tgttcatttg tttctttcgc agtttttagg attgtttcca aaattgctag
     3361 accttcgttt aatgtttcgt ggaaacgttc ttcttctgta cgaatgactt tttggataaa
     3421 gtctgtttgg ttttctactt ccggatagaa actattcatg attttcccaa ctactggtac
     3481 taatttgtac atgaatggtt cgttgattgt taggactttt gcataacgaa cagcacggcg
     3541 aagtaaacga cgtaaaatat atccgcgtcc ttcgttggat ggtaaagcgc cgtcaccgat
     3601 tgcaaatgct acagtacgaa tatggtcagc aatcacttta aatgccacat cattttcttg
     3661 agaatggcca tatttcacgc cagcgatttg ttcaacttca cgaataatag gcatgaataa
     3721 atctgtttca aagttagttg gtgcgtcttg gatgatggaa accattcgtt caagtcccat
     3781 ccctgtatca atgttttgtt ttggtagcgg agtgtaagtt ccatctggat tgtggttgaa
     3841 ctgagaaaat actaagttcc aaatttctaa ataacgctca ttttctccgc ctggatataa
     3901 ttctggatca cttgcatcgt caccgaaagc aggtccacgg tcatagaaaa tttcgctgtc
     3961 tgggccactt ggtccaatac cgatatccca gaaattatct tcaatttcga cgatatgatc
     4021 atcacttaaa ccaatttttt cgcgccataa cgttttcgct tcttcatctt ctggatacac
     4081 agtcacatac aatttatctg gatcaaaacc aatccattta gggctcgtta ggaattccca
     4141 agcaaaaaca atcgcccctt ctttaaaata atcaccgata gaaaagtttc ctagcatttc
     4201 aaagaatgta tgatgacgcg ctgttttacc aacgttttca atgtcatttg tacggattga
     4261 tttttgagcg ttcgccattc ttggattatc tggaataacg gaaccgtcaa agtatttttt
     4321 catggttgct acaccactgt taatccaaag aattgtcgga tcattatttg gcacaagtgg
     4381 tgcactaggt tcgatagtat gccctttttc tttaaagaaa tctaaaaata actgtcttac
     4441 ttcagcgctt gataattgtt tcatttttta tttcctcctt ttggttttaa caacaaaaaa
     4501 agcctatatg attgctcaca gggacgattt cagtaaaatc gcggtaccac cctgtttgca
     4561 atgatataga cttgtatcat tacctcttcc gttatctgtt aacgtggata agacggatca
     4621 tctaatggga gagcaatttt ggtgcaagcg tggttttcct tccagccatg ggaaaactct
     4681 ctaatcacgt ggaaaccaaa atcatattcc tatcatgtat caatttctat tcaacaataa
     4741 actaaattat aaagaacgga tggctaaatg tcaactgttt attagactat tcgttgattg
     4801 tttcttttca acaaagcttc cgtttttaag cgttagtttc acatcggaca cttttgcaat
     4861 ctcgggatca tgcgtcacca taataacgca tttaccttct ttatgcgcta aatcttggaa
     4921 taaagtaact acttctttac tagtacgttc atccaaattt ccggttggtt catccgctac
     4981 aattaattcc gtttcacagc agagagcccg cgctatcgaa acccgttgtt gttggccacc
     5041 gcttaacgtc aatacttttt ggcgtgccat gtcttctgtg atacctactt tttccagcat
     5101 acttagagca aaggcttttt tatctggttg attaacatgg gtaatttcca ttgcagttgt
     5161 gacattttgt agtgcggtca tataggtcaa cagattataa ctttggaaca caatcgatac
     5221 atatttattt ctaaactgtt gtaagccaat acttttgagt gagctacctt tatagaaaat
     5281 atccccttct ttttgcgtat caagtcctcc tgcaagagat aagaaagttg tttttcctga
     5341 gccagaactg ccgactactg tataaaaaac acccgcttca aaatcataat tgatgtcact
     5401 taaaatagat tcttctttcg ttttatacca ataagaaata ttttcaaacg ttaatacttt
     5461 ggtcatatcg tcacctactc ctgtttagtt agaattgttt ttggattcat acgaagaacg
     5521 agtgcagctg gtaaaaggac tgagataaag gcaattccga taccaattcc gcccattttc
     5581 agcatatctt ctaatgttac ttgaatgtct aattctttga tttgttcggt gtttttcgtc
     5641 aagttgctca cgctctcacc gaatccacct ggacctcctt gtccaccacc tggaccacgg
     5701 ttttctgtcg aacttgttgt ttcagtagta gatgaatttt gttgcgccaa taattgattg
     5761 cccgctaatt gtgctacata gtgactactt gcagcggcta ggccaaagga aaccagagct
     5821 acaattaaaa tttccacaaa gaattgcgca atcaatttgc cacgtttttc accaattgcc
     5881 aaaagtacac ccatttcata tttgcggtcg cgcacttgca tcatcacgag taggcctaag
     5941 attagtgctc cggcaatact cacaatataa accacatttt tagagaaaga tgctacgcta
     6001 ttaatcgggc caatcatttg ttgataaagc gtatcattgg catctaattt aaatgtatcc
     6061 caatcaatgc tatcaacttt ttttgcttct ttttcaaaag cagaaatatt agccgcatca
     6121 tccatcgtat aaacagctga gtctactgta tttttataat cggaaccctt aattgtatta
     6181 gctactgtat aaggaacata tactttatta taaggattta ggaaagagaa gttttgtgcc
     6241 atatcacttc cagaatctgt tgttttataa atacccacaa tctttaatgt tactttggta
     6301 ttgccatcac tggatgtgac agtaaaagaa tcgccaactt tccaatcatt ttcttctgct
     6361 aaattttctt ctaccattgc tacattttta tctttatcag cggaagtaat tgccacacca
     6421 cttgttaact cactagttcc tgcttcaaaa tcagtgctag ttgcagaatc aagtaagccg
     6481 ctaatgctta aatcggcatc taccatttgc ggtccacctt ggccgcctcc tggtccttgt
     6541 gtttcggttg tagtggatga ttcatcactc gaagatgatg tatcaccgga agactcgatt
     6601 ggatcaaatc cggatgctaa agcttgtgta ctggaataat aattgtaact tgctacatga
     6661 tttaactttg ccaaatcatt agcatcacta acgtctatcg gactactttg aaattgcggc
     6721 ttggattcag ttgagctact atcactgctt gaagcctcgt ctcgcattgt ctgcatttgt
     6781 ttttctcgat caacagttag cgtcactgta ccaccaagct gttctcgcgc caactcactc
     6841 gctttatctg cagccgattg aatagtaaaa cctgataaaa taagtacaca gacgactgtg
     6901 aatataatta gttgtaaaac agatcttcct tttctcgctt tcatgctgag ccatgctctc
     6961 ttaaaaaaat tcatgtgatt tcctccattc ggtttctact ccactaagat tactggggag
     7021 ttatgaagaa agtatgaaca aactatgatg catattttaa actttcgcga aaaaaataat
     7081 ttggcttgat tattgggtct aattaggcta gttttaatgt aagaggagtg aatacaaatt
     7141 atgaaattac ttatgataga agataatgta agtgtttgtg aaatgataga aatgttcttt
     7201 atgaaagaag aaattgatgc tacgtttgtt catgacggca agcagggtta tgaagcgttt
     7261 tttaaagatg aatatgatat tgcaattatt gacctaatgc ttcctaatat ggacggtatg
     7321 accatttgcc gtaaaattcg tgaagtaagc gatgtaccaa ttattatttt aacggctaaa
     7381 gaatcagaat ccgatcaagt gcttggcctt gaaatgggtg cggatgatta tgtaactaaa
     7441 ccatttagcc cacttacttt aatggcgcga attaaagctg ttacacgccg caaaaatagt
     7501 gccacttcta cagaaaataa tgaagatatc ctagaaacaa cttatttcaa aattagtaaa
     7561 cggacacgag aaatttttta tcaaggtgag ctacttgacg cacttacgcc aaaagaattc
     7621 gatttactct attttttgat gcaacatcca cgacaagtgt tttcaagaga acaattgctg
     7681 gaacaagttt ggggttatca gttctatgga gatgagcgca cagtggacgt tcacatcaaa
     7741 cgtttacgcc aaaaaatcgc caccgaaaca aagccatttt tgcacaccgt ctggggtgtt
     7801 ggctacaaat ttgatgaaac ggaatgaagc gaatgaaatt taaatatgct taccaattat
     7861 ttttcacaca atttatcatt ttgcttattg cttgtatcat gattggggtg cttgtctctc
     7921 actccttaaa agattatttt taccaaagcc aagtagatga cttaacaagt tatgggcaaa
     7981 cgatttctag ggatattcgc tattcgccac aagatgcaac gatgcaagtt ttgaatacgt
     8041 atcagcgaat tttagatgtg aaaaaaattc attatacaat caaaaacgcc aacgatgaaa
     8101 ccatttatcc aacacagatg aatcagccgt taccaaagga tttctctatt tcttcggatg
     8161 ataagaaaaa gcttgaaagt ggcgaaacag ttagtaagaa aatagataat cgctttaata
     8221 aagaaatgac aattgtgtac gtcccaataa tgaatggcga caaatttgtc ggttctatcg
     8281 tgctcaattc acctattagc ggtacggagc aagtaattgg tacgattaac cgctatatgt
     8341 tctacactat tttactttct ataacggtag cacttattct tagcgcaatc ttgtccaaac
     8401 tacaagtaaa tcgaatcaac aaactacgag cagcgacaaa agacgttatt caaggcaatt
     8461 acaaagctcg attgaaggaa aataattttg atgaaattgg tgcacttgcc attgatttca
     8521 ataaaatgac acaaaccctt gaaacatctc aagaagaaat agaacgacaa gagaagcgga
     8581 gacgccagtt tattgctgat gtttctcatg aaatgcgtac cccgctcaca acgattagtg
     8641 gcctcacgga aggtttagta aatgatatta ttccaaaaag tgaaacagat cgttgcatag
     8701 cactcattga tacagaagct agacgtttaa cgaaactagt caatgaaaat ttagattatg
     8761 aaaaaatccg cagtaacaaa attaaacttc aaaaaacacg ttttaatggt aaggaattcc
     8821 ttgagttaat caaagaacaa cttgattatg tatcaagcga aaaaggtaac actattactg
     8881 tttctatcga taaagacatg gcgatttacg cagattacga tcgtttaaca caagtattta
     8941 tcaatatcgt caaaaatagt gtccaattta ctgaaaatgg tcagattact ctaactggca
     9001 cacaagatta taaagaatct gttttaacga taacagatac tgggattggt atgaatacag
     9061 aggaattaga acaaatttgg gaaaggtttt ataaagcaga tatgtctcga acaaataccg
     9121 cttttggcga atctggtatt ggcttatcca ttgtgaagca gttaattgaa tatcacgatg
     9181 gatcaattac agtgactagt gaaccaaata aaggtacttc atttactatt cgccttcctt
     9241 ttttccaaga taacgaacaa taaaaaaaga accactttct atttttttag agagtggttc
     9301 ttttttatcc tgccataaat tgttctggag taatcccttc cattccaatc atcggatcaa
     9361 tttccgtaat attttcagct gtgagaattc gtttatttgt catttgttct aataaaacat
     9421 cttcgctcat taaacgttca gagagtgttg tattacgttt attttcatca attcgttcta
     9481 tccccattcg aaaagcttct tcttccccgc aaagaatgag aaattgttta cttcgcgtta
     9541 ctccggtgta tattaaatcg cgccgtaaca tccggtagta actgcggaca atcggcataa
     9601 tcacaatcgg aaattcactt ccctgcgctt tatggatcga acaacaataa gcatgggtca
     9661 attgattaaa ttcttgccta tagtaagaaa cctctgtttg gtcaaattga acgacaatca
     9721 gatcttgttt ttcggtattt tctttggcgt atataataga cacaatttca ccaatatcac
     9781 cgttaaacac atttttctct ggttgattaa tcaattgcag tactttgtca tgcacgcgat
     9841 actttatgtc accaaattga acttctttac gacgccctgt atcatttgga ttgaaaattt
     9901 cttgtagttt tttatttaaa atatcaatgc ctgcaggacc acgatacatt ggtgctaaaa
     9961 cttggatgtc ttttgctcga aatcctttgt tttttgcatt ttttaccact tgttcgacta
    10021 catcaccaat ttgatttacc gtgcaatgaa aaaaggagcg atcggcgcta tttttggtga
    10081 aatcagctgg caacatgcct tcttttatat aatgcgccat ttcgataatg gaagaaccat
    10141 ccttttggcg gtaaatatct gaaagagcta cagttggaat ttgttcagat tgcagaatat
    10201 ctttgagtac ttgacctggt ccgactgaag gcaactgatc ttggtcgcca acaagtacca
    10261 cttgcatgtg cgctggtaaa gcacggaata attgattagc aagccaaata tctaccattg
    10321 acatctcatc cactatcaac agtcgtccat caatcagtct ttctgcatca tcatccattt
    10381 gttcttgacc attcattcca agtaaacggt gaatggtcat cgcaggaagc cctgttgact
    10441 cagacatccg tttagcggca cggccagttg gagcagcaag aagaacgggg aaagtcgctc
    10501 catctttgta agcatgggga tcaaggctca caccatttag ttccgcataa agctccacta
    10561 tccctttaat gactgttgtt ttccctgtcc cgggaccacc agtaagtacg agcatcggag
    10621 acattaaagc ttgttctaaa gcctgtcgct gcgaatctcc gtagtgaacg ccaatccgtt
    10681 cttctaattc tcctagagct agcagaaatt cggattgcgg aaattgttct tggtattctg
    10741 tttgtttaag cattcgcttc acgtgatatg caaagccgct ctctgaataa tagagtgatg
    10801 gcatgtaaac acgtgtattt tccgtaataa tcttttgttc ctcagctaat ttttctactt
    10861 gagctactaa aatattttgg tcaatacgaa tgccttcgct ttcttccagt aaataagtta
    10921 cttctccgag cagaacctct tgctccatat atacatgacc ttgttgcata caaaccgaat
    10981 ctaacataaa taaaatccca gcacgaagcc gttctggatg attcccgcca agaccgagtt
    11041 tccgtccaag ctcatcggca cgctgaaaac caatcccttt tatatcctca atcaatttat
    11101 aaggattatt ctctaacact tcaatcgcat tttgtttata ggcctggaaa attttcatgg
    11161 ataattgcgg accaaagcca tattcgttta atccgaccat cacatgctcc aacccttgat
    11221 tttctctaag ggaagcaagc aaactttctg ccgcgccaga tggcaactta ggtactgtat
    11281 ttagcaagct cggatcggat aaaatttttg tgatagcatc gtcgccaatc gtatccacaa
    11341 tattttcagc agtgacttta ccaatgcctt taaaaagttc accggataga taattaatta
    11401 agcccgctcg tgattgtggc atttccttac gaaaccggtc tgctttaaac tgttgaccaa
    11461 atttagcatg ttcctgcatt ttcccgtaga aagtgtatac ttcttgctcg tgaagcgctg
    11521 ggaaaaaacc ggttacgata atatcttttt cgtcccaatc cgcattggtt tctttgacca
    11581 atattcgtac aacagaaaag aggttttcgg cattgtaaaa aatggtggac aacatcgtgc
    11641 ccttcatgaa aagttcttct ggtgtatcgt taaatagagc gagtgattct tgttcagcca
    11701 tcctaagccg cctcctttct aattcgtttt actctacttc gttctctaaa tcttgaattg
    11761 catttaaggc gttttcagcc aattcatgtg aagcacctgt agcaatcgct cgttcaaaat
    11821 agtttttagc aagaacgata tctccttgcc acgccagata agctgcacca atattgtaaa
    11881 gtgcatctgg atcttcaggc ttaacaagta aaacgcgttc taacatatta atcgcatctt
    11941 cataaaaacc actgcgagca agcacaatcc catattggaa taacgcttcg ccgtcttctg
    12001 ggtttaattc gacacttcta agtaaatatg gcatcgcaag tgttagctcc tccatttgaa
    12061 caaaactcat tcctaacatg aaaaataaat caccattttc cattccttgt tttgtggcat
    12121 tttggaagct atctgccgct tcttgataac gctctaattc ataatataaa tttcctaagc
    12181 tatagtaagc agctggaact gtgtcatcta gctctagtgc tcttttgaaa aataattccg
    12241 cacgttcaaa atcatccatt gaaagtaaaa catttccaaa attaatataa ccaactggat
    12301 cacttggatg ttc
//
LOCUS       DASDYK010000087        12127 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.087, whole genome shotgun sequence.
ACCESSION   DASDYK010000087 DASDYK010000000
VERSION     DASDYK010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12127
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.087"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..884)
                     /locus_tag="U0308_002186"
     CDS             complement(<1..884)
                     /locus_tag="U0308_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid biosynthesis protein"
                     /protein_id="HEM2317147.1"
                     /translation="MANLKVIENEATILASIPKHNVDYNARVMQSVSVDYERDMIYWT
                     QQYSGKKMTDAGAGESYNITRTDLKGNYIDQMWCLNGGHGTNIALDYNLESKKMHIWS
                     AYKINNKWEVVCYPYESNKILKGTESSIFISKVESGSYNRISGDLKNDMLVFHSGGDP
                     KTFNIRIVRASSVREGKLEVLYKVKATEANDAYVYQGCALDFPYLYTASGTGGVEEPK
                     QLTCVDIVTGKRVYQTTFKFNTKAMQTTESNFAEPENVCVYYKNNQKHIVVGYALGGA
                     GNRMNRAFDLVENNSENI"
     gene            complement(1013..3274)
                     /locus_tag="U0308_002187"
     CDS             complement(1013..3274)
                     /locus_tag="U0308_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HEM2317148.1"
                     /translation="MAQKQLFEIEPWTLRTTKLDKENKRLQESLTSLGNGYMGMRGNF
                     EEGYSGDGHIGTYYAGVWFPDKTRVGWWKNGYPDYFGKVINGLNFIGIEVRLDGEKLD
                     LFVDEVSDFELVLDMEKGVLRRQFTVVKNNKTFRISAERFLSVATKELAVIRYQVEAK
                     SAAKVDLTSFLDGNVQNEDANYEEMFWQEVEKASSASRGSLVTKTIPNNFGTPRFTVS
                     AVMENTTNTANQTNQTKALYAENHFQFDLKENEVAQIEKRVVITTSRDYEEREILPAG
                     EKILQSLEAKTYDELLAAHVAGWRERWDKADVEIAGDDSAQQGIRFNIFQLFATYYGE
                     DARLNIGPKGFTGEKYGGATYWDTEAFALPMYLSLTDKSVSHNLLKYRHDQLDGAKIN
                     AQKIGLAGALYPMVTFTGVECHNEWEITFEEIHRNGAIAYAIYNYTNYTGDDSYLKTD
                     GIEVLTEITRFWADRVHLSDRLDKYMIHGVTGPNEYDNNVSNNWYTNYIAAWTIRYTL
                     ENLDAEAKKRLGVTEYEIAKWEDIEHRMYYPFDEKWQIFVQHDTFLDKELRSTDTLKP
                     EDMPINQNWSWDKILRSCFIKQADVLQGLYLFYDDFDFDTKQRNFEFYEPLTVHESSL
                     SPAVHAVLASELGKYDKAVELYKRTARLDLDNINNDTEDGLHITSMAGSWLSIVQGFA
                     GMRVTDGELSFAPFLPDGWENYRFKINFRDRLLEVKVERNSVEITLLAGKAFEINLYG
                     EPQELHSTVNVTK"
     gene            complement(3290..4123)
                     /locus_tag="U0308_002188"
     CDS             complement(3290..4123)
                     /locus_tag="U0308_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1189 domain-containing protein"
                     /protein_id="HEM2317149.1"
                     /translation="MKKVPFIIQYVKSTLGPTAIFEGRKVLKFWQMVIVFIFLNALLL
                     LPVSAHFANQSSFDLPSLMPKMAALGTDQLATEVSALTLENGALTDKNAHIVEKTANG
                     VAGVNLTKAELSGAKNVINFKDQEMTLTDSSGYTFEVSYPKDATLSEITSGESLVDWV
                     SAQWYLENQAFVFLSMVLMIGSIIFVSSLMLTVFTTLFIWMTKRSSFSSIASFKESVN
                     LTLNALGIPVIAACIIGFIYFDITIIMAVQSLGMVLMIAWTFLKTRFYKTSEKSMAAS
                     R"
     gene            complement(4151..5002)
                     /locus_tag="U0308_002189"
     CDS             complement(4151..5002)
                     /locus_tag="U0308_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2317150.1"
                     /translation="MRDFMKDQRTTKFLTQFFTYLFLTVLTIIILYPILITASSAFKP
                     GNIAAFTLEWSDSWTLNNFTRLFNETLYLDWYKNTLIIAVVTMIMQVTIVTLAGYTYS
                     RYRFKGRKNSLIFFLIIQMVPTMAALTAFYVLAMLLGALDQYWFLTLIYIGGGIPMNT
                     WLMKGYFDTVPRDLDESAKLDGAGHFRIFAQIILPLVRPMIAVQALWAFMGPFGDFLL
                     AKFLLRTPENLTIAVGLQTFIANPQQQKVALFAAGAILAALPICLLFFFLQKNFVSGL
                     TAGGTKG"
     gene            complement(5003..6310)
                     /locus_tag="U0308_002190"
     CDS             complement(5003..6310)
                     /locus_tag="U0308_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2317151.1"
                     /translation="MKLEQKQIKNVRQATLLSIIPGLGQFYNKQNFKGIVFFALFALF
                     IIEFFAVGLNALIGLVTLGSVPGVDHSLFLMIEGTLQLIVTLLFIGFWFINIFDARRV
                     AMQWNLGETVNRSAIAIIKNMLDKGFPYLLTLPAYLVMTFVIIFPVLVTLFMAFTNYD
                     FYHIPPANLIDWVGFKNFFNIFFLSSYRDTFLSVFSWTLIWTICATSLQIVVGVFTAI
                     VANQSFIKGKRLFGVVFLLPWAVPAFITIMSFSNMFNDSIGAINSQVIPLLNHLPFVD
                     INAIAWKTDPFWTKVALISIQGWLGFPYIYVMVTGVLQAIPGELYEAARIDGASAIQR
                     FRKITLPMILFVTAPVFITQYTFNFNNFSIIYLFNEGGPGSVGAGAGSTDILISWIYK
                     LTTGTSPQYAVAAAVTLLISIIVITVSMIAFKKTNAFGNEEMM"
     gene            complement(6398..7657)
                     /locus_tag="U0308_002191"
     CDS             complement(6398..7657)
                     /locus_tag="U0308_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEM2317152.1"
                     /translation="MKRFKKVGIVSAVLVMALSLAACGGGKDTSKSGSSDEKTLTVSV
                     DAGYKDYVNKIKGDFEKDNDVKVKVVEKDMFETLEALPLDGPAGTAPDVMMSAFDRIG
                     SLGQQGHLAEVKLGNKDDYDEKDQKQVTIDDKIYGAPAIIETLVLYYNKDLLDKAPAT
                     FKDLETLSKDSRFAFTSEKGKNTGFLAKWTDFYFSYGLLAGYGGYVFGDEGTNPKDIG
                     LNNKGSVEGITYATKWFQDVWPKGMQDNKSADDFIQDQFVKGKAAAILGGPWSAANYK
                     EAKINYGVAKIPTLNNGKEYSPFAGGKGWVVSNYSKNKDVAQKWLDYVTNQKNQETLY
                     DMTNEVPANLKARDTAKSKNDELTNAVIEQYKNAQPMPNIPEMSEVWTGAENLMFDAA
                     SGSKTPQQSADDAVKVIEDNVTQKYTK"
     gene            complement(7870..9645)
                     /locus_tag="U0308_002192"
     CDS             complement(7870..9645)
                     /locus_tag="U0308_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glycosidase"
                     /protein_id="HEM2317153.1"
                     /translation="MEKAGIYHQPASSYAYSYDAKTLHIRIRTKRLDISEVTLIAADP
                     YLWKDGKWQSESYTMRKIAETEEHDYWFFAITPEHRRLQYGFLLTDTEGETTFYGGRG
                     FFEPTEANLATMDYYFKFPFIHAVDTFEAPEWVGNTIWYQIFPERFANGNPAISPENA
                     LPWGSKDPNTTDFFGGDIEGIIEHLDYLAELGINGVYLTPVFEAPTNHKYDTVDYKKI
                     DPHFGDKETFRKLVQEAHKRGIRIMLDAVFNHIGDTSAEWQDVVLNEEKSAYRDWFHI
                     HSFPVRQNENGNIEGEPTLSYDTFAFTTHMPKLNTANPEVQKYLLDIATYWIREFDID
                     GWRLDVANEVDHAFWKEFKKAVQAEKEDIYILGEIWHDSWIWLLGDEFHAVMNYPFTQ
                     TIIENFIEEKITPEQMVSGINEQYMRYPNQVNEVMFNMLDSHDTARILTRANNDEDKV
                     KQALAFMFAHTGSPCIYYGTEIGMDGGNDPGCRKCMEWDETKQNQDMLAFTKQLIALR
                     KDNQAIITSGELTWLGASSETGITAFSKELNGEKLHFLFNQAKEDKDFTISFENTATD
                     IWNNRAVTENLVVPAKGFLVVKENS"
     gene            9903..10538
                     /locus_tag="U0308_002193"
     CDS             9903..10538
                     /locus_tag="U0308_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM2317154.1"
                     /translation="MENTLSFKKQGYWLFSSAIIIGVLFLLLPHIISNIGVLEFIGAF
                     FNALCMGVIAFIILKAEFLDWFKHFSFKWILIGAPALIIISSIFNIAWAYFAGSTTEN
                     GINSVLTWSYVFTSIPFMLLGEELLSISLLYAAWKKWNWKFWQASLLCSLLFATWHLT
                     SYDFNFLQCIITLAPARLILNYLFKKTNSIWVTFIVHFIFDFIAFLPILLK"
     gene            complement(10574..11539)
                     /locus_tag="U0308_002194"
     CDS             complement(10574..11539)
                     /locus_tag="U0308_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2317155.1"
                     /translation="MATLADVAKRANVSKMTVSRVINHPDQVSDELKMLVYSAMEALE
                     YVPNYAARALVQNRTQVIKFLILEEIDTVEPYYMNLLTGISRELDKYYYSLQLVTQRS
                     RNIGAYDGLIVTGIRDKDYDLGLLDIDKPVIFYGENKRGYDSIDVDNKKGTALATEHM
                     VEIGFSRIVFLGIDLLDEQFMKSRLEGYEEIVKEHGLEPESYFIANSSSVAEEKAFEL
                     LRYNSEKIAIVCASDRIAIGVVRAAAAFGRRFGENIAVTGFDGVFLDRISSPKITTVQ
                     SPVVEMGEELAKMLLAKINDHGKPQGNLLFTPELLIRASTTGKEE"
     gene            complement(11678..11914)
                     /locus_tag="U0308_002195"
     CDS             complement(11678..11914)
                     /locus_tag="U0308_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317156.1"
                     /translation="MQEQDIRYYVLPTIIIFILGIAAMNASSFPFISFLTTTLVAIAI
                     GIIIGGAHQLIRLIIKTYQQTKERRVSQKKWQTL"
BASE COUNT         3584 a         2542 c         1999 g         4002 t
ORIGIN      
        1 tctatgtttt cactattatt ttctacaaga tcaaatgctc tattcatacg attccctgct
       61 cctcccaaag catatcctac tacaatatgc ttttggttat ttttataata tacacaaaca
      121 ttttccggtt ctgcaaaatt gctttctgtg gtttgcattg cttttgtatt gaacttaaat
      181 gttgtttgat acacacgttt tccagttact atatccacgc aagttaattg ttttggttct
      241 tcaacgccac cagtaccaga agctgtatat aaatatggaa aatctaacgc acacccttgg
      301 taaacatatg catcatttgc ttcagttgcc tttactttat aaagtacttc aagctttccc
      361 tctcttacag aggaagcacg cacgattcta atattaaacg ttttaggatc tccacctgaa
      421 tgaaaaacca acatatcgtt tttcaaatct cctgaaattc ggttatagct gccactctct
      481 acttttgaaa tgaaaatact ggactcggtt ccctttagga ttttattact ttcataaggg
      541 taacaaacca cttcccattt attgttaatt ttatatgccg accaaatatg cattttttta
      601 ctttctaaat tataatcaag tgcaatattt gttccatgcc caccgtttaa acaccacatt
      661 tgatcaatgt aatttccttt caaatctgtc ctcgtaatgt tatatgactc cccagctcca
      721 gcatcagtca ttttttttcc gctgtactgt tgcgtccagt aaatcatatc tcgctcgtag
      781 tcaacagaaa cagattgcat tactctagca ttgtaatcaa cattatgttt aggtatagaa
      841 gctagaatag ttgcttcatt ttctattact ttcaaatttg ccattatccg atcccctttt
      901 gatttattat cagctgataa actaagtata agacaaatta actttcaaaa agtatcgaaa
      961 aagtatcatc aaaaaactcg catcaggcta tctgatacga gtttttcatt tttcatttag
     1021 ttacatttac agttgaatga agctcctgtg gttctccata taagttaatt tcaaaagctt
     1081 ttcctgcaag tagtgttatt tccacactat ttctttctac tttcacttct aacaaacgat
     1141 ctcggaagtt gattttgaaa cggtaatttt cccagccatc aggtaagaat ggtgcaaagc
     1201 ttaattcgcc atcagttact cgcataccag caaagccttg aacgatggat aaccagcttc
     1261 ctgccataga ggtaatgtgc agtccatctt ctgtatcgtt gttaatgtta tcaagatcta
     1321 gtcttgctgt acgtttgtat agttctactg ctttatcata tttaccaagt tctgaagcta
     1381 acactgcgtg aacagctggc gataagctag attcgtgtac tgttaatggc tcatagaatt
     1441 caaagttacg ttgttttgta tcaaaatcaa agtcatcata gaataaatat aaaccttgaa
     1501 ggacatctgc ttgtttaatg aaacaagaac gtaaaatttt atcccaagac caattttggt
     1561 taatcggcat atcttctggt tttaatgtat ccgtggaacg taactcttta tctaagaacg
     1621 tatcgtgttg cacaaaaatc tgccatttct cgtcaaaagg ataatacatg cgatgctcaa
     1681 tatcttccca tttggcgatt tcgtactcgg tcacacctaa acgttttttc gcttctgcat
     1741 ctaagttttc tagcgtataa cgaatcgtcc aagcggcgat atagtttgta taccagttat
     1801 tgctgacgtt attatcatat tcatttggtc ccgttacacc gtgaatcatg tatttatcta
     1861 agcgatcaga taaatgaacg cggtcggccc aaaaacgagt gatttcagtc aatacttcga
     1921 ttccatctgt ttttaaatac gaatcatcgc cagtgtaatt tgtgtaattg taaatcgcat
     1981 aagcaatcgc gccattgcgg tgaatttctt caaatgtaat ttcccattca ttatgacact
     2041 caactccggt aaaagtaacc attggataca gtgcgccagc taggccaatt ttctgcgcgt
     2101 tgattttcgc tccatccaat tgatcgtggc gatatttaag taaattgtga ctcacagatt
     2161 tatccgttaa cgataaatac attggtagtg caaaagcttc tgtatcccag tatgtcgcgc
     2221 cgccatattt ttcgcctgta aagcctttag gaccaatgtt tagtcttgcg tcctcaccgt
     2281 aataagtagc aaataattgg aaaatgttaa atcggatacc ttgttgcgcg gaatcgtcgc
     2341 ctgcaatctc gacatccgct ttatcccaac gttcacgcca acccgcaaca tgcgcggcta
     2401 ataattcatc atacgttttt gcttctaagc tttgtaagat tttttctcct gctggaagaa
     2461 tttccctttc ctcataatca cgagatgtcg taatgactac acgtttttct atttgcgcta
     2521 cttcattttc ttttaggtcg aattgaaaat gattttcggc gtaaagtgcc tttgtttgat
     2581 ttgtttggtt tgccgtattg gtcgtatttt ccatcacagc tgaaacggtg aaacgcggtg
     2641 ttccaaagtt gtttggaata gtttttgtga caagtgaacc gcgacttgct gatgaagctt
     2701 tttcgacttc ttgccagaac atttcttcat agttggcatc ttcgttttgc acattgccat
     2761 ctaaaaagga cgttaaatcc acttttgcag cgctcttcgc ttccacttga taacgaataa
     2821 ccgcaagttc tttcgttgca acacttagga atcgttccgc cgaaatccgg aatgtcttat
     2881 tatttttaac tactgtgaat tgacgtctca aaacgccttt ttccatatct aaaacaagtt
     2941 caaaatcgct tacttcatct acaaataaat cgagtttttc accgtcaaga cgtacttcaa
     3001 ttccgataaa attaaggcca ttaatgactt ttccgaaata atccgggtag ccatttttcc
     3061 accaaccaac tcttgtttta tctggaaacc acacgcctgc ataataagtt ccaatatggc
     3121 cgtcgccgga gtatccttct tcaaaattcc cgcgcatccc catgtaacca ttaccgagtg
     3181 aagttaggct ttcttgcaaa cgtttatttt ctttatctag tttggttgtc cgtaatgtcc
     3241 atggttcgat ttcaaataat tgcttctgtg ccatactaaa acctcctaat tagcgactag
     3301 cagccatact tttttcacta gtcttataaa atcttgtctt taaaaatgtc catgctatca
     3361 ttaacaccat tccgagcgac tgaacagcca taataatcgt aatatcaaag tagataaagc
     3421 cgataataca agccgcaatc actggaattc ccagtgcatt tagcgttaaa tttactgatt
     3481 ctttaaaaga agcaatgctt gaaaaactgc tccgttttgt catccaaatg aaaagcgtcg
     3541 taaacacggt taacatgagt gagctaacga aaatgataga accaatcatc agcaccatcg
     3601 ataggaaaac aaatgcttgg ttttccaaat accactgcgc cgacacccaa tcaacgagcg
     3661 actcgcctga cgttatttcg cttaaggtcg cgtcttttgg gtagctaact tcaaaagtgt
     3721 aaccactcga atccgtaagc gtcatttctt ggtctttgaa attaattaca ttcttcgctc
     3781 cactaagttc tgctttcgtt aaattcacac cagcaacacc attcgctgtt ttttcgacga
     3841 tgtgcgcatt tttatcggtt aacgccccat tttcgagcgt cagtgcacta acttctgtcg
     3901 ccaattgatc cgtgccaagc gccgccattt ttggcattaa acttggtaaa tcaaagcttg
     3961 actgattagc aaagtgcgcc gaaacaggaa gcaacagtaa cgcatttaag aaaataaata
     4021 cgatgaccat ttgccagaat ttcagtactt tccgaccctc aaaaatagcg gttggaccga
     4081 gtgtactttt tacatattga atgataaacg gaactttttt cattgatatc acagcctttt
     4141 taaaaatcaa ttatcctttt gttccaccgg cagttaagcc agaaacaaaa ttcttttgta
     4201 agaagaagaa cagtaaacaa attggtagcg cggctaaaat ggcgcccgct gcgaataagg
     4261 ctactttttg ttgttgtggg ttggcgatga acgtttgaag tcctaccgca atcgttaagt
     4321 tttctggtgt tctaagaagg aatttcgcaa ggaggaagtc cccaaacggt cccataaacg
     4381 cccataaagc ttgaacggca atcatcggtc taacaagtgg caagatgatt tgagcgaaaa
     4441 tgcggaaatg tcctgcgcca tcaagtttgg cggattcatc tagatcacgc ggcacggtat
     4501 cgaaataccc tttcatcagc catgtgttca tcggaatccc accaccgatg taaatcaatg
     4561 ttaagaacca atattgatca agtgcgccaa gtagcatcgc taacacgtag aaagctgtta
     4621 aggccgccat cgttggtacc atttgaataa taaggaagaa aatcaagctg tttttacgac
     4681 ctttaaaacg gtaacggcta tacgtataac ccgcaagcgt cacaatcgtt acttgcataa
     4741 tcatcgttac aaccgcgata atcagtgtat ttttgtacca atcaagatat aatgtttcat
     4801 taaacaatct cgtgaagtta ttcagcgtcc aactatccga ccactcaagc gtaaatgccg
     4861 cgatattccc tggtttgaag gcagaagatg ctgttattag aatcggatac aaaataataa
     4921 tcgttagcac ggttaaaaac aaatacgtga aaaactgtgt taagaacttt gttgtccgct
     4981 gatctttcat aaagtctctc atttacatca tctcctcgtt cccaaaggca ttcgtcttct
     5041 taaaggcaat catcgaaaca gtaataacga taatagagat aagaagcgtc acagcagcag
     5101 ctacagcgta ttgtggcgaa gtacctgttg ttaatttata aatccatgaa attaagatat
     5161 cggttgatcc tgcgcctgct ccgacacttc cgggaccacc ttcattgaat aagtatatta
     5221 tcgaaaagtt gttgaagtta aatgtatatt gcgtaataaa taccggcgcg gttacaaata
     5281 aaatcatcgg taatgtaatt ttacggaaac gttgaatcgc acttgcacca tcaattctag
     5341 ctgcttcgta tagttcacca ggaattgctt gaagcacccc agtaaccata acgtaaatat
     5401 acggaaaacc aagccaacct tgaatactaa tcagcgccac ttttgtccag aaaggatctg
     5461 ttttccaagc aatcgcattg atatcaacaa atggcaaatg gtttagaagc ggaatgactt
     5521 gcgagttgat tgcgccaata ctgtcgttaa acatattgga aaaactcata attgtaataa
     5581 atgctggtac cgcccaagga agtaagaaaa ctaccccaaa aagacgtttc cctttaataa
     5641 agctttggtt cgcaacaatc gccgtgaata caccaacgac aatttgtaaa gaagtggcac
     5701 agattgtcca aatgagtgtc cacgaaaata cgcttaggaa cgtgtcacga tacgaactta
     5761 ggaagaaaat attaaagaag ttcttaaatc caacccagtc aattaagttc gctggcggaa
     5821 tatggtaaaa atcatagttg gtaaatgcca tgaaaagagt aacaagaact gggaaaataa
     5881 taacaaaagt catcactaag tatgcaggta atgtaagtaa gtacgggaaa cctttgtcga
     5941 gcatattttt tataatagca atcgcagaac ggttaacagt ttcacctagg ttccactgca
     6001 tagccacgcg tcttgcatcg aaaatattta taaaccaaaa gcctataaat agtaatgtca
     6061 caattaattg taaagtacct tcaatcatta aaaataagga atggtctaca cccggtacag
     6121 atccaagtgt tacaaggcca atcagtgcat tcagcccaac tgcaaaaaat tctatgataa
     6181 acaaagcaaa tagtgcgaaa aagacaatcc ctttaaaatt ttgcttatta taaaattgac
     6241 caagtcccgg aatgattgat aacaaagtcg cttgacgaac atttttaatt tgtttttgtt
     6301 ctagtttcat tttgttaccc tcaattctag atatagattc actagctaag ttgaaaaaaa
     6361 tggcggagcg cgctatcttt gccccgccaa atcattatta tttagtatat ttttgcgtta
     6421 cgttatcttc aattactttt actgcatcat ctgctgattg ttgcggtgtt ttcgaaccag
     6481 aagctgcatc aaacattaag ttttcagcac ctgtccaaac ttccgacatt tctggaatat
     6541 ttggcattgg ttgcgcattt ttgtattgtt cgataacagc attagttaat tcatcatttt
     6601 ttgatttcgc tgtatcgcgt gcttttaagt tagctggtac ttcatttgtc atatcatata
     6661 aagtttcttg atttttttgg ttagttacat aatccaacca tttttgagct acatctttgt
     6721 ttttagaata gttacttaca acccaacctt taccgcctgc aaatggagag tattctttgc
     6781 cattgtttag tgtcgggatt tttgctacgc cgtaattaat ttttgcttct ttgtagtttg
     6841 ctgctgacca tggaccgcct agaattgctg ctgctttacc tttaacaaat tgatcttgga
     6901 taaagtcatc tgcactctta ttgtcttgca taccttttgg ccatacatct tggaaccatt
     6961 ttgttgcata agtaattcct tcaaccgaac ctttattgtt taaaccgatg tcttttggat
     7021 tcgtaccttc atcgccgaat acataaccgc cgtatcctgc aagtagtccg taagagaagt
     7081 agaaatcagt ccattttgct aagaaaccag tattttttcc tttttcagaa gtgaaggcaa
     7141 aacgagaatc tttagaaagt gtttctaaat ctttgaaagt tgctggagct ttgtcgagta
     7201 aatctttatt atagtaaagt actagagttt caataattgc tggagcgcca taaattttat
     7261 cgtcaatggt tacttgtttt tggtcttttt catcgtaatc gtctttattt ccaagtttta
     7321 cttccgctaa atgtccttgt tggcctaagc ttccaattct atcaaatgcg gacatcatta
     7381 cgtctggagc agttccagcc gggccatcaa gtggcaatgc ttctaatgtt tcgaacatgt
     7441 ctttttcgac tacttttact ttcacgtcat tatctttttc aaaatcacct tttattttgt
     7501 tcacgtagtc tttgtagcct gcgtcaacgg aaaccgttaa tgttttttca tcagatgagc
     7561 cagatttact agtgtctttt ccaccaccac atgctgctaa gcttaaagcc attactaaaa
     7621 ccgccgaaac tattcccact tttttgaaac gcttcattta cttttcctcc tctttatgaa
     7681 aaaagtcgcc ctttactgtc tgatttctaa gtccccatct tttttcaatt ctttttaaag
     7741 tttgtgaatt aggttaacct atgcatttat tatatgctga tttcgaaagc gtttacaagg
     7801 agatttcaca tgttaccgat aacaacattt tttcggtaaa catgtgaaaa attcctttac
     7861 gccattgatt tagctgtttt ctttaacaac aagaaatcct tttgctggga caacaagatt
     7921 ttctgttaca gctcggttgt tccaaatatc tgtcgctgta ttttcaaatg aaattgtgaa
     7981 atctttatct tcttttgctt gattgaaaag gaaatgcagt ttttcaccat ttaattcttt
     8041 agaaaatgct gtaatgcccg tttcgctact tgcacctagc caagttaatt cgccggatgt
     8101 gataattgct tggttatctt ttcttagggc aattaattgt ttcgtaaacg ctagcatatc
     8161 ttggttttgc ttcgtttcat cccattccat acacttacgg caacctgggt catttcctcc
     8221 gtccatgccg atttcagttc cgtaataaat acacggcgaa ccagtgtgcg cgaacatgaa
     8281 ggcaagcgct tgtttcactt tatcctcatc attattagca cgagttaaaa tacgcgccgt
     8341 atcatggcta tcaagcatat taaacattac ttcattcact tgatttgggt agcgcatata
     8401 ttgttcatta ataccagaaa ccatttgctc cggtgtgatt ttttcttcaa taaagttctc
     8461 aataatcgtt tgtgtaaatg gatagttcat tacggcgtgg aattcatctc caagtaacca
     8521 aatccacgaa tcatgccaaa tttcaccaag aatataaata tcttcttttt ccgcttggac
     8581 agccttttta aattctttcc agaaagcatg atctacttca ttagcaacat ctaagcgcca
     8641 accatcaatg tcaaattcgc gaatccagta agttgcaata tccagtagat acttctgaac
     8701 ttctgggtta gccgtattta attttggcat atgcgtcgtg aaagcaaatg tatcgtaaga
     8761 aagtgttggt tctccttcaa tattgccatt ttcattttga cgaacaggga aactatggat
     8821 gtggaaccaa tcacgatatg cagatttttc ttcatttaag acaacatctt gccactctgc
     8881 tgaagtatcg ccaatgtgat tgaacaccgc atctaacata atgcgaatcc cacgtttatg
     8941 cgcttcctga actaattttc taaacgtttc tttatctcca aaatgtggat caattttttt
     9001 ataatcaacc gtatcgtatt tatgattggt tggtgcttca aacacaggtg tcaaataaac
     9061 cccattaata ccaagctctg ctaaataatc taaatgctcg ataattcctt ctatatcccc
     9121 gccgaaaaag tctgttgtgt tcggatcttt acttccccac ggcaaggcat tttccggaga
     9181 aatagccgga ttcccatttg caaaacgttc tgggaaaatc tggtaccaaa tagtattccc
     9241 aacccattca ggcgcctcaa aagtatccac cgcatggata aatggaaatt taaagtaata
     9301 atccatcgta gctaaattag cctcagttgg ctcaaagaaa ccacgtccgc cgtaaaatgt
     9361 tgtttctcct tctgtatctg ttagtaaaaa gccatattga agacgtctat gttctggtgt
     9421 aattgcaaaa aaccaataat cgtgctcttc tgtttctgcg attttgcgca ttgtataaga
     9481 ttcactttgc cattttccat ctttccataa gtaagggtcg gcagcaatta gagtaacctc
     9541 gctaatatcc aagcgtttcg ttctaatccg aatatgtagt gttttagcgt cataactata
     9601 agcatagcta ctcgctggtt gatgataaat ccctgctttt tccatttttt ctcctcctat
     9661 atcacctatc gttctatttc aaattagcat ttccattaaa gcgtttgcaa ccttttctcg
     9721 ctcgttaacg gtaacaagat tttctaacta tttcatattc tttcaacata atatagaaga
     9781 aagccaattc tccctcctcc tttaaagtga caaattagta actttactga tttaaagtaa
     9841 agagctataa taactcatgg actaatgaaa tctatcgaaa aaaggtctaa aaggaggata
     9901 aaatggaaaa tactttaagc tttaaaaaac aagggtattg gttattttcc agcgcaatca
     9961 ttattggtgt tctttttctt cttttgccac acatcatttc caatattgga gtgttagaat
    10021 ttataggtgc tttttttaac gccctatgca tgggggttat tgcttttatc atactaaaag
    10081 cagaattcct cgattggttt aaacatttta gtttcaaatg gatcctcatc ggtgctccag
    10141 cattaattat tatcagctct attttcaaca ttgcttgggc ttacttcgcg ggcagtacta
    10201 ctgaaaatgg tatcaacagt gtacttacat ggtcttacgt tttcacaagc atcccgttca
    10261 tgcttcttgg cgaagaacta ctatccatta gcttactcta tgccgcttgg aaaaaatgga
    10321 actggaaatt ctggcaagct tccttgctct gctcgttact atttgcgacg tggcatctga
    10381 cttcctatga ttttaacttc ttacaatgta tcattacttt agcacctgct agactcattt
    10441 tgaactactt atttaagaaa acaaactcga tttgggttac tttcatcgtt cacttcattt
    10501 ttgatttcat cgcattttta cccattttac tcaaataaaa aaacgctagg aataaagatt
    10561 cctagcgttt ttattactct tcttttccag ttgtagaggc tcttatcagt aattcaggag
    10621 taaataatag gtttccttga ggttttccgt gatcattaat tttcgcaagt aacatcttcg
    10681 cgagttcttc ccccatttca acgacgggag attgaacagt tgtaattttt ggcgatgaaa
    10741 ttctatctaa aaaaacacca tcaaaccctg ttacagcaat attttcacca aaacggcgac
    10801 caaaagcagc ggcagcacga acaaccccaa tggcaattcg atctgatgcg caaacaatcg
    10861 caattttttc tgagttatag cgtagtaatt caaatgcttt ttcttccgcg acactggaac
    10921 tattcgcaat aaaataactt tccggttcca aaccatgttc tttcactatt tcttcatagc
    10981 cttctaggcg cgatttcata aactgttcat ctaataaatc aattcccaaa aagacgattc
    11041 gcgaaaaacc gatctctacc atatgctctg ttgcgagcgc agtccctttt ttattatcta
    11101 catcaataga atcatagcca cgtttatttt caccataaaa aataactggt ttatcaatat
    11161 ctaaaagtcc taaatcataa tctttgtcgc gtattcccgt gacaataagc ccgtcataag
    11221 ctccgatatt cctggatctt tgcgtaacga gttgaagcga atagtagtat ttatctaact
    11281 cccgactaat tcctgttaat aaattcatat aatatggttc aactgtatca atttcttcta
    11341 aaatcaaaaa tttaataact tgcgtcctat tttgaacaag cgcccttgca gcataatttg
    11401 gtacatactc taaggcttcc attgcactat aaacaagcat tttcagttca tctgagactt
    11461 gatctggatg attaataacc cgtgaaactg tcattttgga gacatttgcc cgtttcgcaa
    11521 catctgctaa agtcgccatc tccaacctcc tccattcata atcttcctta ttgtaccatc
    11581 ttttacacaa aaaaaaataa gaattaaccc acaaaaaaag cattctcatt aaaagtctga
    11641 aaatgcttgg tttattatga atatgtaatg agtcatttta tagtgtttgc cacttttttt
    11701 gagagactct gcgttccttc gtttgttgat aagttttaat aatcaatcta attaattgat
    11761 gagctccgcc aataataatt ccaatagcga tagcaacgag cgtagttgtc agaaaactaa
    11821 taaatggaaa actagatgca ttcattgcag caattcctaa tataaaaatg ataatagtag
    11881 gtagtacata atacctaatg tcctgttcct gcatacaaag cgctccttta cccaaaataa
    11941 taactcccat caactactga aattataacg cgaaaactgg cttttttcaa ggcttggatg
    12001 gatttccatg ctcctcttta aaaacgttaa atggctctat atagcgcttt atatagatac
    12061 gcaaaatcca ctcattatga attcatcaaa aagaaaaatt tgttaccact ttgtaacatt
    12121 acttaag
//
LOCUS       DASDYK010000088        11883 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.088, whole genome shotgun sequence.
ACCESSION   DASDYK010000088 DASDYK010000000
VERSION     DASDYK010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11883
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.088"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            21..911
                     /locus_tag="U0308_002196"
     CDS             21..911
                     /locus_tag="U0308_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rgg family transcriptional regulator"
                     /protein_id="HEM2317157.1"
                     /translation="MVAYGELIREVRLSKGLTQKEVYTGVISKSYAIGFEKGKHDITL
                     VLFEEILERVMLSSDEFFFMNRGYSLAEEDNFWYKFANAANQKSLADLQELYQEVLQQ
                     TGDRANLRKAIVHSRMEINEQFLLNNRFDVSIVSEKDKAVIQTYLWKVQSWTLEEIRI
                     FANSVDYFEEDVQIYFFQLVLKSLEKYKHYDRGKKVFSTLLSNIIEELITRNQLEYAA
                     QLLEILHELSSTHDCAFYRIMHNYYQGLIWMKNDQVEQGLKESKSAIRILDVLDYKSL
                     AQLYNTLLQQFLEKENIQIV"
     gene            1046..1759
                     /locus_tag="U0308_002197"
     CDS             1046..1759
                     /locus_tag="U0308_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate phosphodiesterase"
                     /protein_id="HEM2317158.1"
                     /translation="MLNQKYQLLLQNEYDTKSGDLVKKEIVAIKKTKNLLEDLTTHLL
                     CVTNQTEYGKFINWYEMEVKKVLQVYPNQHFIVKISFQQLYFRETMLLLENLQKDSRR
                     ITIELVGDSQISPNSKEHFSAEDSDAFLKGKLKMLRKWHYFISKHIESGAIEQTLIFT
                     PYIDELKYSLTQKSKLLNNITELKFFLSFWKNWAELRFVDFLVLVYEKNEFVSYVLLP
                     DELNVRCKMYENFGGMVSE"
     gene            1752..2756
                     /locus_tag="U0308_002198"
     CDS             1752..2756
                     /locus_tag="U0308_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2317159.1"
                     /translation="MSKNVKKIVITILALIMTVGLASGFIAPIKASAATNNFTVKVEY
                     VDADGAEIAPSDTLTDYHYVSTPKDIPGYKLREIPHNATGNITDTGIIVRYIYDKIID
                     VSYVDETGKDLLPVVEIIDSEAAILETIPDYTFVRKDISIDGSHIIFRYKKNISTIPE
                     FGKPNQVTVNYLDENNTSIAPSLYLSGLFNEAYNVPMKKIKGYTLLKYDSEILGVFTE
                     SPQTINIIYQKKAPEQAPSMEPLPDTAVPENPPVEKAKIKKSKIETTEKRTISKAKIE
                     PKALKLTKVEQKKQETKDRLPKTGDSSVNLLITCLGIIAISCGVYLLVQQSQKRCRKE
                     "
     gene            complement(2799..3212)
                     /gene="psiE"
                     /locus_tag="U0308_002199"
     CDS             complement(2799..3212)
                     /gene="psiE"
                     /locus_tag="U0308_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HEM2317160.1"
                     /translation="MKRLEKISSIVPILLRITLNLALIMVGFTLVAFLIREAFTIFNN
                     IFFLDTDVSYYYMTQDILTFFLYFEFIALIVKYFESHFHFPLRYFIYIGITAIIRFII
                     VDHSSATSTLILSGAILLLVAALFLANTKMLKREG"
     gene            3301..5022
                     /locus_tag="U0308_002200"
     CDS             3301..5022
                     /locus_tag="U0308_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014092266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317161.1"
                     /translation="MLKRFFSYYKPYRTLFIIDFGCAVLAAILELAFPVAVNHVIDTL
                     LPGKDFGLIITAALALLFFYILNTFMQYIVTYFGHMLGLNIETDMRRDLFSHLQKQPF
                     GFYDNQKTGKLMSRMTTDLFEIGEVAHHGPEDIFISIMSLFGAFFLMLNINVKLAIST
                     FILVPILTVLIVYFNKRMTKVTTGIFKDLGNFNAGVENAISGVRVVQAFANEPHEKGR
                     FRVLNQAYRQSKLMFYKVMGLSFSFNYFLMRLISLFALLFGAYFTINGEISYGEFVGF
                     ILLTNVFIRPIEKINNVIESYPKGFAGFKRFLEVMDTEPAIQDEKDAKPAKAFRGDIA
                     YNHVSFEYSDGKNVLNHINLSIKAGETVAFVGPSGAGKTTICNLLPRFYDVSAGEITI
                     DGENIKRFTLPSLRAQIGVVQQDVFLFSGTVRENIAYGKLDASDEEIEHVVKLAHLSK
                     VVEEMPDGLDTIIGERGVKLSGGQKQRLAIARMFLKNPPILILDEATSALDTETEQVI
                     QASLEELAEGRTTLIIAHRLATIKHADRIIVVNETGIAETGTHNELLAQDNGAYKRLY
                     DAQFNTI"
     gene            5315..6700
                     /gene="hpt"
                     /locus_tag="U0308_002201"
     CDS             5315..6700
                     /gene="hpt"
                     /locus_tag="U0308_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose phosphate transporter Hpt"
                     /protein_id="HEM2317162.1"
                     /translation="MSLFSLKRKNHFVPLEIQRQQWFKHFIVAFMSVFICYLTVYLLR
                     NNFKAAQTLLIEQNHFSTTELGMIGLAFSVMYGIGKTILGYAVDGRNAKKIMSFLLGI
                     SAIISIIIGILLVTKQATVGILFILWGANGFVQSPGGPASYSTITRWTPKLKRGRWLG
                     FWNASHNIGGALAGIVAFWGATTFFNGGAGGMFIVPGIIAIIIAIICFSVGHDEPEEL
                     GWNSAAEIFEEREEQGESETKDLSRFQILCRFVINNPWVWTLCVINIFIYIVRIGIDN
                     WAPVYCIQALGWSTKDAIMTISFFEIGALLGSLSWGWLSDIMKGRRMLCSIIAVVIEF
                     FMLISYSQVTSVYSMYTVLFILGFLVFGPQLLIGVSVIEFVPRNALAVTNGLTGTFAY
                     LFGDSFAKVFLGYIADPTKAGIQIFGYTLHGWGATFTIMFTALIIAGLMMIPVALKQE
                     KIIRQAKVLHL"
     gene            complement(6808..8019)
                     /locus_tag="U0308_002202"
     CDS             complement(6808..8019)
                     /locus_tag="U0308_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance MFS efflux pump"
                     /protein_id="HEM2317163.1"
                     /translation="MSSTKSIINKKTLLFGLISVFLCGMGFSIIMPVVPFLVTPYVTN
                     ASDQALMVTLLTSVYALCVFFAAPGLGALSDRFGRRPVLLICFIGSAIGYFIFGLGGA
                     LWVLFLGRIFEGITGGSISTLFAFFADITPQEERTKYFGWVSAAAGAGAALGPAFGGL
                     LAHFGYAMPFFFGAAITFINFLFGYFYMPESLEEANRLKRIPLMRLNPFSQLLKILTI
                     KNLGRLLIAAFFIWVPNGSLQAVMSQFAIDSFSWKPVLIGMMFSIMGIQDILSQAFVM
                     PKLLLKLTDKQIAILGMIAEIIGYLLIAASSIFTLAPLLVIGMFVFGFGDSIFGPSFN
                     GMVSKSASASEQGRIQGGSQAIQSVARIIGPVIGGQLYITLGHAAPAIMGVLLITVAI
                     FILYKKTSLAK"
     gene            complement(8149..8619)
                     /locus_tag="U0308_002203"
     CDS             complement(8149..8619)
                     /locus_tag="U0308_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2317164.1"
                     /translation="MDKNEQVMANVRDLFNKLAWINKVKMEKALEGYKPSEVHCIEYI
                     AKNEDPNVTKLAEAFYMTKSAISKITKKLMDKGYIESYQKPENKKEIYFRLTAKGAEI
                     NQVHDDLHQEFLDRDKVVFEDVTDAQYAEVLKFVDKYSRHLDNEMQKVYNQKSE"
     gene            8821..11463
                     /locus_tag="U0308_002204"
     CDS             8821..11463
                     /locus_tag="U0308_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-transporting ATPase"
                     /protein_id="HEM2317165.1"
                     /translation="MEIYRKSAAETFTQLEATEQGLTTSEVTKRQEKYGFNELKNKKK
                     DPLWKLFLETFKDPMVIVLVVAALVQLVLGEVVESLIIFLVLIVNSIISVVQTRKAES
                     SLDALREMSAPVAKVIRDGSKQSIHARELVPGDVVILDAGDFVPADGRLFESGSLKID
                     EGMLTGESEAVEKYIDTIPDEVGLGDRVNMVFSGSLVVYGRGMFVVTGTASETEIGKI
                     AGLLETAEAKQTPLQRKLESFSKKLGLGILALCVLIFAVEAGRVLLGDNSADMATAIL
                     NAFMFAVAVAVAAIPEALSSIVTIVLAVGTNKMAKQHAIIRKLPAVETLGSTSVICTD
                     KTGTLTQNKMTVVDYYLPDGTKENFPESPENWSEGERRLIHIAVLCNDSNINSEGKEL
                     GDPTEVALIAFSNKNNQDYNEIREKFIREGEIPFDSDRKLMSTLHTFNGNKAMLTKGG
                     PDVMFARCSYVFLDGEEKPMTEEILAKLKETNEEFSNQALRVLAYGYKRMPADTTELK
                     LEDEQDIVLVGLTAMIDPPREAVYASIEESKKAGIRTVMITGDHKTTAQAIGRDIGLM
                     DADDIALTGQELDAMPEEELDKKLEHIAVYARVSPENKIRIVKAWQKKGKITAMTGDG
                     VNDAPALKQADIGVAMGSGTDVAKDSAAMILTDDNFVSIVDAVGVGRTVFDNIKKSIA
                     YLFAGNLGAIIAILFALVLDWINPFTALQLLFINLVNDSLPAIALGMEKAEPDVMKRK
                     PRDINEGIFAGGTMRAVISRGVLIGIAVIISQYIGLQISPGMSVAMAFTTLILARTLQ
                     TFAARSNVQTAFGAGFFSNKYVIGAVLLCFVLYGITVLPGAREIFSIPASFGLHEWSI
                     AAGLALAAVVMMEIIKLVQNKFFK"
BASE COUNT         3926 a         2041 c         2398 g         3518 t
ORIGIN      
        1 atatatagga gacgatatca atggttgcgt atggtgagtt aattcgcgaa gtacgacttt
       61 caaaaggatt gacgcaaaaa gaagtttata caggggtaat ttcaaaatca tatgcaatag
      121 gttttgaaaa aggaaaacat gatattacat tagtactatt tgaagaaatt ttagaacgag
      181 taatgctaag ttcggatgaa tttttcttta tgaatagagg ttattcttta gcggaggaag
      241 acaatttttg gtacaaattt gcaaatgcag ctaatcaaaa aagtttggca gacttacaag
      301 aattatacca agaagtgttg cagcaaacag gagatagagc caatctaaga aaagcaattg
      361 tccactcaag aatggaaatt aatgaacaat ttctattaaa taatcgattt gacgttagta
      421 ttgtttctga gaaagataaa gcagttatcc aaacgtattt gtggaaagtc caatcatgga
      481 cactagaaga aattcggatt ttcgctaatt cagtggacta ttttgaagaa gatgtacaaa
      541 tttatttttt tcaattggtc ttgaagtcac tcgaaaaata taaacattac gatcgtggca
      601 aaaaagtatt ttccacgctt ctatccaata taattgaaga actaattacc cgtaatcaat
      661 tagaatatgc cgcgcaatta ttagaaatac tgcacgaact gtcttctacg catgactgtg
      721 ctttttaccg gattatgcat aattactatc aaggcttaat ctggatgaaa aatgaccagg
      781 tcgaacaagg cttaaaagag tctaaaagtg ccattcgaat tttagatgta ctggattaca
      841 aatcccttgc acaactttat aatacattac ttcaacagtt tttagaaaaa gagaatatcc
      901 aaatagttta aagtaaagca ggtacccgta atagggtatc tttttttggt cttatatata
      961 agaccaaatg agttttatgg cacatatgtt gtattatttg gaatgtacta attttcacat
     1021 gcttttttgg aaaggagaga tttttatatt aaatcaaaaa tatcaattac tacttcaaaa
     1081 tgagtatgat actaaaagtg gtgatttagt caaaaaagaa atagttgcta ttaaaaaaac
     1141 taaaaatctc ttggaagatc taactacgca tttgttatgt gttacaaatc aaacagagta
     1201 tggaaaattt atcaattggt atgaaatgga agttaaaaaa gttctacaag tttatcccaa
     1261 tcagcacttt attgttaaaa tttcctttca acaattatat tttcgggaaa caatgctgtt
     1321 gcttgagaat ttgcagaaag atagccggcg aataacgatt gaactagttg gggatagtca
     1381 gattagccct aattcaaagg aacatttttc cgcagaagac agtgacgctt ttttgaaagg
     1441 gaagttgaaa atgttgagaa agtggcatta ttttatttca aagcatattg aaagtggtgc
     1501 catcgaacaa acgctgattt ttacgcccta tattgatgaa ttgaaatata gtttaacgca
     1561 aaagtcgaag ctcttaaaca atattacaga attaaagttt tttctatcat tttggaaaaa
     1621 ctgggccgaa cttcgatttg ttgatttttt agttttagta tatgaaaaaa acgaatttgt
     1681 atcgtatgta cttttaccag atgaattaaa tgtacgttgc aaaatgtatg agaactttgg
     1741 aggaatggtc agtgagtaaa aatgtaaaaa aaatagtgat aacaatctta gcattaataa
     1801 tgacagtagg attggcgagt gggtttatcg cacctataaa agcaagtgca gccacaaata
     1861 atttcacggt taaagtggaa tatgttgatg cagacggagc cgagattgct ccttcggata
     1921 cattaactga ttatcattat gtatctacac caaaagatat tcctggctat aaattaagag
     1981 aaatacctca taatgcgaca ggcaatatca cagatactgg gattatcgtg cgttacatat
     2041 atgataaaat aatcgatgta agctacgtag atgaaactgg caaagactta ttaccagtag
     2101 tagaaatcat cgatagcgaa gcagctattt tagagacaat acctgactat acatttgtaa
     2161 gaaaagacat tagcatagat ggctcgcata tcatttttcg ctataaaaag aatatttcta
     2221 ccattccaga gttcgggaaa ccgaatcaag tcactgtaaa ttatctggat gaaaacaata
     2281 cttcaattgc cccgtcatta tatttgagcg gacttttcaa cgaagcatac aatgttccga
     2341 tgaaaaaaat taaaggttat actttattaa aatacgattc ggaaattctt ggcgttttta
     2401 ccgaatcacc acaaacaatc aacatcattt atcaaaaaaa agcgcctgag caagcaccaa
     2461 gcatggaacc attacctgat acagctgttc cagaaaatcc gccagtagaa aaagcaaaaa
     2521 taaagaaatc aaaaatagaa accacagaaa agcgaactat atcaaaagca aaaatcgaac
     2581 caaaagcatt gaaattaacc aaagttgaac aaaaaaaaca agagacgaaa gatcgcttgc
     2641 caaaaacagg tgatagctcg gtaaatttat taattacgtg cctcggaatt attgccatat
     2701 cgtgtggcgt ttacttactc gtacaacaaa gccagaagcg ttgtcgtaaa gaatagaaaa
     2761 taaaaacaag caatcctatt ttcggattgc ttgttttttt acccttctcg tttaagcatc
     2821 tttgtattag ctaaaaacag tgcagcgacg agtaaaagaa tcgcgcctga aagtattagc
     2881 gtcgaagttg cgctagagtg gtcgacaata ataaatcgaa taatcgctgt gataccaata
     2941 taaatgaaat agcgcagcgg gaaatgaaaa tgagattcga aatatttaac aatcagcgca
     3001 ataaattcaa agtaaaggaa aaacgtcaaa atatcttgtg tcatataata gtaagaaacg
     3061 tctgtatcta aaaagaaaat attattgaaa atcgtaaatg cctctctaat taaaaaagca
     3121 acaagggtaa aaccgaccat aataagcgcc agatttaggg tgattcgtag caggatggga
     3181 acaatagaag aaattttttc taatcgtttc atcagttgcc tcctttccaa aaacgatatc
     3241 gcttttttag ttattttaca ctataatggg aaccatgact atttttaagg ggggattgtt
     3301 attctaaaac gcttttttag ttattataag ccgtatcgaa cactttttat cattgatttt
     3361 ggttgcgccg tcttagcagc tattttggag ctggcttttc cagtcgcggt taaccacgtg
     3421 attgatacat tacttccagg aaaagatttt gggctgatta ttactgcggc acttgcctta
     3481 ttattcttct acatacttaa cacttttatg cagtacattg tcacttattt tggccatatg
     3541 cttggtctta acatagaaac agatatgcgt agagatttat tcagtcattt gcaaaaacaa
     3601 ccatttggct tttacgacaa tcagaaaacc ggaaaattga tgtcacgaat gacgactgac
     3661 ttatttgaaa ttggtgaagt agcgcatcat ggtccagaag atatttttat ttcgattatg
     3721 tcccttttcg gtgcattttt cttaatgttg aatatcaatg tgaaattagc gatttcgacg
     3781 tttattctag taccgatttt gactgtatta attgtttact tcaacaaacg aatgaccaaa
     3841 gtaacaaccg ggatttttaa agatttaggg aattttaatg ctggagtgga aaatgcaatt
     3901 agcggggtgc gtgtcgtgca agcattcgcc aacgaaccac atgaaaaagg gcgttttaga
     3961 gtgctcaacc aagcgtatcg tcagtcaaaa ttaatgttct acaaagtgat gggcttgagt
     4021 ttttcgttta actattttct gatgcgattg attagtttat ttgccctttt attcggagct
     4081 tattttacga ttaatggcga aatatcatac ggggaatttg tcggatttat cttgctaaca
     4141 aacgtgttca ttcgaccaat cgagaaaatc aacaacgtaa tcgaaagcta tccaaaaggc
     4201 tttgcagggt ttaagcgatt cctagaagtc atggatacag aaccagcaat ccaagacgaa
     4261 aaagacgcaa aaccagccaa ggcgttccgc ggtgacattg cttacaacca tgtatctttt
     4321 gaatatagcg atgggaaaaa tgtactaaat catataaatc tttctatcaa agccggcgaa
     4381 accgttgcct ttgttgggcc aagtggagct gggaaaacga cgatttgtaa tttgttacca
     4441 cgtttttacg atgtgtcagc tggagagatt acaattgacg gtgaaaatat taaacgattt
     4501 actttaccgt ctttacgagc acaaatcggt gtcgtgcaac aagatgtctt tttgttttcc
     4561 ggtacagttc gcgaaaatat tgcgtacgga aaattagacg ctagcgatga agaaatcgag
     4621 catgtcgtga aacttgccca tctttccaag gtagtagaag aaatgccaga tggtcttgac
     4681 accatcattg gtgagcgcgg agtcaaactt tctgggggac aaaaacaacg gttagctatt
     4741 gcgcgaatgt ttttgaagaa cccaccgatt ttaattttag atgaagcgac gtcagcactt
     4801 gatacggaaa cagagcaagt gattcaagcc tcgctagaag agttagcgga aggaagaacg
     4861 actttaatta tcgcgcacag actcgcaacg attaagcatg ccgatcgaat tatcgttgta
     4921 aatgaaacgg gcatcgcaga aactgggacg cataatgagc ttttagcgca agataatggt
     4981 gcctataagc gattatatga tgctcagttt aatacgattt aacgagtaaa aactttcggg
     5041 ttttaggaaa tattttacta aaaggaaagc aggaattatt tgggaacccc aagataattc
     5101 ctgctttttg ttttctgcat gataacaagt gttaatgacg gaaatagaat ttctgtttta
     5161 tatttttagc agcgcaaaag gggaaataaa gcatttggac agcagaggtg attgctttag
     5221 aaaaattgat agactttata tggaaacgtt tgcgtaataa tgctcatcgc attctaaatt
     5281 tggaatgaaa attacacttg aaaggaaatt tataatgtca ttattcagtt taaaaagaaa
     5341 gaaccatttt gttccactag aaattcaaag gcaacaatgg ttcaaacact ttatcgttgc
     5401 atttatgtct gtatttattt gttatctaac ggtctatctt ctaaggaata actttaaagc
     5461 ggctcagaca ttgttaattg agcagaacca tttcagcacc acagaactag gaatgattgg
     5521 tttagctttt tctgttatgt acggaattgg aaaaacgatt ttagggtatg ccgtggatgg
     5581 aagaaatgct aaaaaaataa tgagtttttt attagggatt tccgccatta tatcaattat
     5641 tattggaata cttttagtta caaagcaagc aacagtgggt atattgttta tcctttgggg
     5701 agcaaatgga tttgtgcaat caccaggtgg accggcttcc tattcaacta tcacacgatg
     5761 gacgccaaaa ttgaaaagag gaagatggtt aggtttttgg aatgcctcgc ataatatagg
     5821 tggtgcttta gcgggaattg ttgctttttg gggtgcgact actttcttta atggcggggc
     5881 agggggaatg tttatcgttc cgggtatcat tgcgatcatc attgcaatta tttgcttctc
     5941 cgtggggcat gatgaaccag aagaattagg atggaactct gccgctgaaa tttttgaaga
     6001 gcgggaagaa caaggagaat cggagacaaa agacctttct agatttcaaa ttttgtgtcg
     6061 atttgttatt aataatcctt gggtatggac tttatgtgtc ataaatatat tcatctatat
     6121 tgttagaatt ggtattgata attgggcgcc cgtttattgt attcaagcgc taggatggag
     6181 cacaaaagat gcaattatga ctatttcttt ttttgaaatt ggagcattgc taggttcatt
     6241 atcgtggggc tggctctcag atattatgaa aggccgccgt atgctttgct cgattattgc
     6301 agttgtcatt gaatttttca tgttaattag ttattcgcaa gttacaagtg tttatagcat
     6361 gtatacggta ttatttattt taggattctt agtatttggc ccccaacttt taattggtgt
     6421 gtcggtgatc gagtttgttc ctagaaatgc tttagctgta acaaatggct taactggaac
     6481 gtttgcatac ttattcggag attcttttgc taaagtcttt ctaggatata tcgcagaccc
     6541 aacaaaagcg ggtatacaaa tatttggcta tactttacac ggctggggcg caacttttac
     6601 cattatgttt acagctttaa ttattgcagg cttaatgatg attccagttg cattaaaaca
     6661 agagaaaatc atccgacaag caaaagtttt acatctataa gttgaaaagt aatgagtgaa
     6721 gataaactaa ttactaaaaa ggtatcctaa ttaatagtat aaggatacct ttttcattgc
     6781 aaaatggttt gttaaatacg aaaaaaatta ttttgctaaa gaagtctttt tataaagaat
     6841 aaaaattgca acagtgatta aaaggacacc cataatagca ggagcggcat ggccaagcgt
     6901 aatataaagt tgcccaccga taacgggtcc gataatacgc gccaccgact gaatggcttg
     6961 gctacctcct tgaatccgac cttgttcgct agcgctagca gattttgaaa ccatgccgtt
     7021 aaacgaaggt ccgaaaatcg agtcgccaaa accgaaaacg aacattccga taacaagtag
     7081 cggtgcaagt gtgaaaatcg aggaagctgc aataagcaaa tagccaataa tctcagcaat
     7141 catccccaaa atagctattt gtttgtccgt taacttgagt agtaattttg gcataacaaa
     7201 agcttgcgac aagatatctt gaattcccat aatggaaaac atcatcccaa ttaaaactgg
     7261 cttccaactg aaactatcaa tggcgaattg agacatgaca gcttgcaagg aaccattagg
     7321 aacccaaatg aaaaatgcag caatcagtaa acgtcctaag tttttgatgg tcagaatttt
     7381 aagcagctgg gaaaacggat tgagtcgcat aagcggaatt cgttttaaac gatttgcttc
     7441 ttctaaactc tcaggcatgt agaaataacc gaataaaaag ttgatgaaag taatcgctgc
     7501 tccaaagaaa aatggcattg cgtaaccaaa gtgggcaagc aatccaccga aagccggacc
     7561 aagcgcagca cccgcaccag ctgcagcgct aacccaacca aagtatttcg tccgctcctc
     7621 ttgaggcgta atatcagcaa agaaagcaaa tagtgtactt atgctaccac cagtgattcc
     7681 ttcaaaaatt cgaccaagaa agagcaccca aagcgcccca ccaagaccga aaataaagta
     7741 accaatcgca gagccgataa aacaaatgag taacactggt cgtctgccaa atctgtcact
     7801 taaagcacca agaccaggcg cagcaaagaa cacgcaaagc gcataaacag atgtgagcag
     7861 tgtcaccata agcgcttgat cactagcatt tgttacgtaa ggtgttacga gaaacgggac
     7921 aacgggcata ataatactaa aacccatccc acaaaggaag acagatataa gaccgaaaag
     7981 taaagttttc ttattaataa tagatttagt tgaagacatg taatactcct atcgattgta
     8041 attagtgtcc taggaaacat aattagctta actcgttttt gtttccttgt caacaaaaat
     8101 aaaacaataa aaaacaacct aacttgaaaa attaggctgt tactaggttt attcggattt
     8161 ttgattgtaa actttctgca tttcattatc taaatgacga ctatatttat ccacaaattt
     8221 taacacttcc gcatattgtg catccgttac gtcttcgaaa actaccttgt cacgatcgag
     8281 gaattcttga tgcaaatcat cgtggacttg gttaatttca gcgcctttag ctgttagacg
     8341 gaaataaatt tctttcttat tctccggttt ttgataactt tcaatatagc ctttatccat
     8401 cagctttttt gtaattttgc taatcgcgct ctttgtcata tagaaggctt ccgcgagttt
     8461 cgttacatta ggatcttcat ttttggcaat gtattcgatg cagtggactt cagaaggttt
     8521 atatccctct agcgcttttt ccatcttcac tttattaatc caagcgagct tattaaataa
     8581 atctctgacg ttcgccatga cttgttcatt tttatccatg ccatgccctc ctactctatc
     8641 tgcttgtagt atagctgttt tttgtgtccg gttcaactat ttattgcctt tcgtagctaa
     8701 aaggggaact tgaaagcgct gtttgttaag agtgtgtaaa tttccagtgt tatcaatatt
     8761 atttcactgt taagatttgt tatacttaac acataaactg tttggaaggg gctgacatga
     8821 ttggagatat accgcaaaag cgcggcagaa acatttacac aactagaagc aacagaacaa
     8881 ggcttaacaa ctagtgaggt aacaaaacga caagaaaaat acggttttaa cgaactgaag
     8941 aataaaaaga aagatccact ttggaaactt ttcctggaaa catttaaaga tccaatggtt
     9001 attgttttag tcgttgctgc cttagtgcag ttggttttag gcgaagtggt tgaatcgctt
     9061 attatctttt tagtacttat tgtcaactcg attattagcg tagttcagac gaggaaagca
     9121 gaaagttcgc ttgatgcatt acgagaaatg tctgcgccgg ttgccaaagt aattcgtgat
     9181 ggctctaagc aaagtattca tgcgcgcgaa cttgttccgg gtgacgtcgt tattttggat
     9241 gctggtgatt tcgtcccagc agacggccgt ttgttcgaaa gcggctcttt aaaaatcgac
     9301 gaagggatgc ttaccggtga atcggaagcg gtcgagaaat atattgatac cattccagat
     9361 gaagtggggc ttggcgaccg tgtgaatatg gttttcagcg gttccctcgt tgtatatggt
     9421 cgtgggatgt ttgttgtaac aggcacagcg agcgaaacag aaatcggaaa aatcgccgga
     9481 cttcttgaaa cagcagaagc aaaacaaaca ccactacaaa gaaaactaga atcattcagt
     9541 aaaaagctag gactcggtat tttagctctc tgtgtactta tttttgcagt tgaagctggt
     9601 cgcgtattac tcggcgacaa ttcagcggat atggcaacgg cgattttaaa tgcctttatg
     9661 tttgccgtgg ccgtagctgt agcagcgatt ccggaagcac tttcttctat tgtaacgatt
     9721 gtacttgcag ttggaacaaa caaaatggca aagcagcacg cgattattag aaagctccca
     9781 gcagttgaaa cacttggctc cacaagcgtt atttgtacag acaaaaccgg aacgttaacg
     9841 caaaataaaa tgacggtcgt cgattactat ttacccgatg gcacaaaaga aaatttcccg
     9901 gaaagtccag aaaattggtc agaaggggaa cgccgtttga ttcatattgc ggtactttgt
     9961 aacgattcaa atattaacag tgagggcaag gagttaggcg acccgaccga agtggcgcta
    10021 attgccttta gtaataaaaa taatcaagat tacaatgaaa ttcgcgaaaa attcattcgt
    10081 gaaggcgaaa ttccctttga ttcagatcgt aagttaatgt ctacgcttca tacctttaat
    10141 ggaaacaagg caatgctaac aaaaggcgga ccagacgtga tgttcgcgcg ttgcagttat
    10201 gttttccttg atggggaaga aaagccaatg acagaagaaa ttttagcgaa attaaaagaa
    10261 acaaatgaag aattttcgaa tcaggcgctc cgggtccttg cttacggcta caaacggatg
    10321 cctgctgata caactgaatt aaaattagaa gatgagcaag atatcgttct agttggctta
    10381 actgcaatga ttgatccgcc acgtgaagcc gtgtatgcat cgattgaaga gtccaaaaaa
    10441 gctggcattc gtacagtcat gatcaccggt gaccataaaa caacggcaca agcaatcggc
    10501 cgtgacattg gtttaatgga tgccgatgat atcgcattaa caggccaaga actagacgca
    10561 atgccagaag aagaactcga caaaaaacta gaacatatcg cagtctacgc ccgagtttca
    10621 ccagaaaata aaatccgtat cgtcaaagct tggcagaaaa aaggcaaaat cacagcaatg
    10681 actggcgacg gtgtcaatga tgcacccgct ttaaaacaag ccgatattgg tgtcgcaatg
    10741 ggtagcggaa ccgacgttgc gaaagactct gccgcgatga ttctgaccga tgataatttc
    10801 gtttcgattg tggatgcggt tggcgttggt agaaccgttt ttgacaatat taagaaatca
    10861 attgcttatc tatttgcagg aaacctaggt gcgattattg cgattttatt cgcgctagtg
    10921 ctggactgga ttaacccgtt cactgcgtta caattactat ttatcaactt agtcaatgac
    10981 tccttaccag caatcgcact aggtatggaa aaagcagaac ctgacgtaat gaaacgcaaa
    11041 ccgagagata ttaacgaagg catttttgct ggtggaacga tgcgcgccgt tatcagccgc
    11101 ggtgtattaa tcggtatcgc tgttatcatc tcacaatata tcgggttgca aatttcacca
    11161 gggatgagtg ttgcaatggc atttactacg cttatcctag cacgtacatt acaaacattt
    11221 gcagctcgct cgaatgtcca aaccgcattt ggcgcaggat tcttcagtaa caaatacgta
    11281 atcggtgcgg tattactttg tttcgtccta tacggaatta cagtattacc aggagctcga
    11341 gaaattttct caatcccagc atcatttggc ctacatgaat ggtcgatagc agcggggcta
    11401 gcacttgcag cagttgtgat gatggagatt attaaattag ttcagaataa gtttttcaaa
    11461 taaattatat aaacacagaa atcactcgtt tggcggagga tttctgtgtt ttttctttct
    11521 atccaaaata acttatgaga atgataagta gtcattgcgc aggtgaaaat taataattag
    11581 ttgttttatt ggaaaaagta ctaaaaaggt aaaaaaacga tgagatgaat tgtgtatgtg
    11641 gtgaatttta ttggtgaatg gctctgtaaa agggaagtgg agaatctttt aaaaattact
    11701 aacgattctt catttgttaa atatgtcgga attgtgtcgg aaaccgcttt tttatatgac
    11761 gaacttttgt ataaaattct tatattcatt ctttatttta aaaactcatt ttagtcatat
    11821 gtacatagaa gtttttagca agtaatataa gagttgcaat gtgattacac attatttcgc
    11881 aac
//
LOCUS       DASDYK010000089        11710 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.089, whole genome shotgun sequence.
ACCESSION   DASDYK010000089 DASDYK010000000
VERSION     DASDYK010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11710)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11710)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11710
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.089"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            130..435
                     /locus_tag="U0308_002205"
     CDS             130..435
                     /locus_tag="U0308_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2317166.1"
                     /translation="MKRKLVLAMVLISFCGMFFLSPDRVQASQTVVEVFISEDDLDVS
                     EENIQEIPKKELAASSDKDNKQPILPKAGDTVTNYTLLGLVLVLIWLIMQRRSKKKE"
     gene            510..776
                     /locus_tag="U0308_002206"
     CDS             510..776
                     /locus_tag="U0308_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2317167.1"
                     /translation="MARIEYEEKIQKSLLVLYFRGSTIQSICREYGIPRYEFHKWMKL
                     HDADKLETKEVKTFLQIRELKQQKNKLEEEILFLNEAINLLESP"
     gene            complement(1100..2200)
                     /gene="nadA"
                     /locus_tag="U0308_002207"
     CDS             complement(1100..2200)
                     /gene="nadA"
                     /locus_tag="U0308_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEM2317168.1"
                     /translation="MNLLETVEQDTMPTHYKQMTQAEMIARVTEIKAQLGENLFIPCH
                     HYQKDEVVPFADAIGDSLQLAQIAAQNKKAKHIVFCGVHFMAETADMLTTSEQIVTLP
                     DMRAGCSMADMADIHQLTNAWPKLQTLFGDTILPVTYINSTAAIKSFVGEHGGTTVTS
                     SNATKIVSWALEQKERIFFLPDQHLGRNTAFELGIPLEHMAIWNPIKNELEYEGNLDD
                     CKVILWKGYCSVHQHFTVKNIENIRKNNPKMRIIVHPECTHEVVSLADDSGSTKKIVT
                     EINNAAPGTEWAVGTEANLVGRIIQENPDKKIVSLNPFMCPCMTMNRIDLPHLLWTLE
                     AIQNGEQRNQIKVDKQTTKFALKALERMLQLS"
     gene            complement(2197..3042)
                     /gene="nadC"
                     /locus_tag="U0308_002208"
     CDS             complement(2197..3042)
                     /gene="nadC"
                     /locus_tag="U0308_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEM2317169.1"
                     /translation="MNSILMNQAIQAFLLEDIGQHDLSAETVFPRDTMGEGVFLAKET
                     GILCGISIPPKVYELLGGNIQFEAYKKDGDWIQKGDIIAAVTAPVRTLLSGERVILNL
                     MQRMSGIASQTNFAVKQLDDSAIRICDTRKTAPGLRAFDKYAVQTGGGFNHRNGLYDG
                     VMLKDNHIAFSGGITSAVSTVREKLGHMVKIEVETETAEQVKEAVQAGADIIMFDNRT
                     PEEIKQLVKLVPPHITTEISGNVTLENIHRYKGSGANYLSLGSLTHSVRAFDISFNSK
                     GGIKA"
     gene            complement(3039..4493)
                     /gene="nadB"
                     /locus_tag="U0308_002209"
     CDS             complement(3039..4493)
                     /gene="nadB"
                     /locus_tag="U0308_002209"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HEM2317170.1"
                     /translation="MTKERVIIIGSGIAGCTAAFRLMHDYDVTIITKGLKEESNSMLA
                     QGGVAAAVSKNDTPKKHFSDTFQAGCFHNKVLAVNQLVTNGPIVIQKLIAEGMTFDEQ
                     NGELSLGLEGAHQLPRILHTGGDQTGKFLTTFLQEKLTNIHWQEQKMAIEIIKQNDSA
                     IGVHCLDKENRLHTYYGEHIILASGGLGQLFPVTTNAATISGDGLALAYRAGAKLTDM
                     EFIQFHPTLLFLNGRCHGLISEAVRGEGAKLIRADGSAVMTDVHPRADLAPRDIVAAT
                     LFAEIQDGNEVFLDITPIPNFEERFPGITANLDAYHVPFRETKRIPVHPGAHFLMGGI
                     RTDLSGKTNIPGLYAIGEVANAGVHGANRLASNSLLETLVFGEKVAEYILTQKTNLID
                     HPEIPLSNQTRTPHLPDKQLLQEKIWETLGITRKPEKITEFLHWLTDFDYANHTRETA
                     EISHMLITAKIIAESALKRTESLGAHRILKGVIK"
     gene            4625..5731
                     /locus_tag="U0308_002210"
     CDS             4625..5731
                     /locus_tag="U0308_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM2317171.1"
                     /translation="MIYFDHAATTKMSEASLQVFMDASREFFANSESLHDAGTKSAAL
                     LEKCRESFSELLQVPNRGILFTSGGTESNQIAIQTLIHTTDKKEVLVSPLEHASVWQQ
                     LMALEQAGKCRIKVLPVDSFGQVNPATLEKMISAETGLIIIQHVNSEIGTIQPIAELA
                     HIAKKAGVFFHTDIVQSFGKIDLDLSDATSFSISSHKIYGPKGAGILFMKPDSPLQAV
                     LPDVHHEFGFRPGTVNVPAIAAFTTAAYDIIENREQEAIRAMKLKAAICDTLEARVEV
                     EGGPNTSPYILGLTLPNMQGQEALLALNEADIQISTTSACSLRDLAPSRTLIATGKTT
                     EEANRFIRLSFGRENELNDSIIFKEEIDKLLRKR"
     gene            5736..6257
                     /locus_tag="U0308_002211"
     CDS             5736..6257
                     /locus_tag="U0308_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription repressor NadR"
                     /protein_id="HEM2317172.1"
                     /translation="MKKILGDTRRQMILKWLKEAEAPISGNQLAQKTNVSRQVIVQDI
                     SLLKAGNEPIMATPQGYIYAKETSYTGERRVIAVKHTKEQAAEELNILVDHGVSIIDV
                     IVDHPIYGEITASLHLKSRFDVEKFVRKLQTTGATMLSGLTDGTHLHTIEADTKEQLE
                     QAIKALDKAGFLI"
     gene            6353..6880
                     /gene="divIVA"
                     /locus_tag="U0308_002212"
     CDS             6353..6880
                     /gene="divIVA"
                     /locus_tag="U0308_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein DivIVA"
                     /protein_id="HEM2317173.1"
                     /translation="MPLSPLDIHNKEFTRGFRGYDEDEVNDFLDQIIKDYEQVIKEKK
                     RIEDTLNNSEERLGHFTNIEETLNKSLIVAQTAAEEVKASAEKEAKLIIREAEKNADR
                     ILSDSLSKARKIAIEIEDLKRQSKVFRERLRMLVEAQMDLIKSEDWQQMMAYDVDATE
                     LASIKEVEAAESEER"
     misc_binding    6877..7110
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            7163..9928
                     /gene="ileS"
                     /locus_tag="U0308_002213"
     CDS             7163..9928
                     /gene="ileS"
                     /locus_tag="U0308_002213"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEM2317174.1"
                     /translation="MEYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKN
                     AGRKAYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIE
                     TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYE
                     AEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQDKKSASIFVAFKVTDGK
                     GVLDEGTNIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALLPSLREKLG
                     FEDATVVKTVRGSELDRVVTKHPFYDRDSLVMNGEHATAEAGTGAVHTAPGHGEDDFL
                     IGKKYDLEVLAPLDDHGVFTEEAPGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSY
                     PHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWV
                     ISRQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTH
                     PGSPNGEFTKETDIMDVWFDSGSSHQAVLNARPELSRPADLYMEGSDQYRGWFNSSLT
                     TAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVD
                     YQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNAVSYENLREVDKYMLIK
                     LNDLVKNVKDNYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQ
                     TVFYEAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDLPEVKVLADSEEITAKW
                     DAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVDGEAKTLFDSLEGDFAQLFIVSD
                     FELVEGLENAPESAFKSNQVAVQITVAEGETCERCRVVKKDVGVNPKHPTLCGRCADI
                     VVKHYEA"
     gene            10040..11029
                     /locus_tag="U0308_002214"
     CDS             10040..11029
                     /locus_tag="U0308_002214"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEM2317175.1"
                     /translation="METIHFTKVHGSQNDFFLVDEEENHITEWSDEKRANFAIKLCDR
                     KHSLGGADGILYVTKSSEVGPIGQMRVVNSDGSIASMCGNGLRTVARYLLEKHALTDA
                     KVETMKAILDVKKATSLGFDIPTYQVEISPVKFAAETLPMHVGVEKLFNQVIPELDAE
                     LAFSAVSVPNPHLITFVDQAVLDSDKQEKLASYLNSENPYFPDGVNVSFVKRLSDDAI
                     YVRTFERGVGFTNACGTAMSACSLIKKMLDNDILETPLNVYNDGGRVQVTAKKDAAGE
                     ISLQLIGNATFVSKGSVRYENDVVTELTNEATAEQAQYQALVKEVKEFLKTTE"
     gene            11043..>11710
                     /locus_tag="U0308_002215"
     CDS             11043..>11710
                     /locus_tag="U0308_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEM2317176.1"
                     /translation="MNTNRKKATPLFVIGGFCLILFITIASAIATESNWVARFDLSWI
                     EKIRGGIQPDKTAIVKFLTTLGSAETTIILTIVVVLILFFLRKFVVGLWFGGTMLVCG
                     VVLNLVLKSLVGRTRPASVNWLVSESGFSFPSGHATATAVFYGLAAMFLIFIVPKMWQ
                     KIVIGIIGYGFILFVMYTRVYLGVHFPTDVLGGFFLGTASVFISLGVYFLVRKPLHNL
                     LVKWR"
BASE COUNT         3632 a         2089 c         2539 g         3450 t
ORIGIN      
        1 gaggaaacag aagtaagtaa aattcaaatt ggaaaccctc aaggagacaa aaaagctgga
       61 gcatatcaaa caacgttaac ttttacagct gcttttaaat aagaaattac gaaaggagtt
      121 gtgcatttct tgaaaaggaa attagttctg gcaatggtac taatcagctt ttgtgggatg
      181 ttcttcttat cgcctgaccg tgttcaagct agtcagacag tggttgaggt gttcatttca
      241 gaggatgatt tggatgtcag tgaagaaaac atacaggaaa tccctaaaaa agaactggca
      301 gcctcttcag ataaggataa caaacaaccc atattaccta aagcaggtga tacagtaact
      361 aactatacct tgttgggttt agtgctcgtc cttatttggt tgataatgca aagaaggagt
      421 aagaagaaag aataacccct atgacagcat cgtaatgtag caagtaaaaa aggaaagaaa
      481 atttctgtat tagataggaa gtgataggta tggctcgaat cgaatatgaa gaaaaaattc
      541 aaaaaagcct actggtttta tactttaggg ggtctaccat acagtctatc tgcagggagt
      601 atggtattcc tcgttacgaa tttcacaaat ggatgaagtt acatgatgcc gataaactgg
      661 aaaccaaaga ggtgaagact ttcctacaga taagagaatt aaaacaacaa aaaaacaaat
      721 tagaagaaga aattttgttt ttaaatgaag caatcaatct gttggaaagt ccttgagagg
      781 gatgatttta agtattgatt gataggtagt atgagagaga gggtgataat ttcatcttct
      841 cttttttgct tttatatttt ggtacagctg attcatgtaa aaaaagggta tacccaaaat
      901 atacacaaaa ccatcagtgt aaatgcattt ttttcaatgt atagttaggg tggatattaa
      961 atggttgtga aaagagttgc tttttagtca tgatagtagc atatgctcga gtaagttcta
     1021 cagattaaaa tttagattga caaatagaag cttttataaa ggagctgaaa cgaaagcagt
     1081 tgctgctttc gtttttttat tagcttaatt gaagcattct ttctaaggct tttaaggcaa
     1141 atttggttgt ctgtttatcg actttgattt ggtttcgttg ttcgccgttt tggatagctt
     1201 ctagtgtcca gagtaaatgt ggtaaatcaa ttcgattcat ggtcatacaa gggcacataa
     1261 acggatttag cgagacgatt tttttatctg ggttttcttg gataatgcga ccaactaaat
     1321 tggcttcggt accgactgcc cattctgtgc caggtgcggc attgtttatt tcagttacaa
     1381 tttttttcgt tgaaccggaa tcatctgcta aagaaacgac ttcatgggtg cattcgggat
     1441 gaacaataat ccgcatttta ggattgtttt tacgaatgtt ttcgatattt ttgacggtga
     1501 aatgttggtg aacagagcag tagcctttcc acagaatgac tttacaatca tccaaattgc
     1561 cctcatattc cagttcattt tttatcgggt tccaaattgc catatgttcg aggggaatgc
     1621 ctagttcgaa cgcagtgttc cgacctagat gttgatccgg aagaaagaaa atccgctctt
     1681 tttgttcgag cgcccatgag acaatttttg ttgcgttact agatgtcacc gtagtcccac
     1741 catgttcacc gacgaaggat ttaattgcgg cagtggaatt aatgtaagtg acaggtaaaa
     1801 tcgtatcgcc gaaaagggtt tgcagttttg gccaagcatt tgttagctga tgaatgtccg
     1861 ccatatctgc catcgaacaa ccagcgcgca tatccggcaa agtaacaatc tgctcgcttg
     1921 tcgtaagcat atccgctgtt tctgccataa aatgaacacc gcaaaaaacg atatgtttgg
     1981 cttttttatt ttgtgcagca atttgcgcta attgtaagga atcgccaatc gcatcggcaa
     2041 atggaacgac ctcatctttt tgataatggt ggcaggggat aaagagattc tcgccaagct
     2101 gggctttaat ttccgtgacg cgggcaatca tttcggcctg cgtcatttgc ttataatgag
     2161 ttggcattgt atcttgttcg accgtttcta gtaaattcat gcctttattc ctcctttgct
     2221 attgaaactg atgtcaaatg cacgaacgga atgcgttaag gagcctaaag aaaggtaatt
     2281 tgccccagaa cccttataac gatgaatatt ttctaaagtg acattaccgg aaatttctgt
     2341 agtaatgtgc gggggaacta gcttaaccag ttgcttgatt tcttccggtg tgcgattatc
     2401 aaacattatg atatctgcgc cggcttgaac ggcttctttt acttgttcag cagtttccgt
     2461 ttccacttcg atttttacca tatggccaag tttttcccgt acagtagata cagcacttgt
     2521 aatacctcca gagaaggcga tgtggttgtc ttttagcata acaccatcgt atagaccatt
     2581 gcgatgatta aagccgccac cagtctgtac cgcgtattta tcgaaggcac gcagaccggg
     2641 cgctgttttc ctcgtgtcgc aaattcgaat agcggaatca tccagttgtt tgacagcaaa
     2701 attagtttgg ctagcgatac cactcatccg ttgcattaaa tttaaaatga cccgctcacc
     2761 ggaaagtaac gtgcgaactg gagccgtaac agccgcgata atatcgcctt tttgaatcca
     2821 gtcaccatct tttttataag cttcaaattg tatatttcca ccgagcagtt cgtaaacttt
     2881 cggtgggatg gaaatgccac aaagaatacc tgtttctttt gctaggaaaa caccttcccc
     2941 cattgtgtca cgggggaaaa cagtttctgc acttaagtca tgttgaccga tatcttctag
     3001 taaaaatgct tgaattgctt gattcataag tatggaattc attttattac tccttttaat
     3061 attcgatgtg cgccgagact ttctgttcgt ttgagcgcgc tttcggcgat tatttttgcg
     3121 gtgataagca tgtggctaat ttccgctgtt tctcgagtgt gatttgcgta atcgaaatca
     3181 gtaagccaat gaagaaattc ggtgattttt tctggttttc ttgtgatgcc aagcgtttcc
     3241 cagattttct cttgaagtaa ttgtttatct ggtaaatggg gtgttcgggt ttggttcgaa
     3301 agagggattt ctggatggtc tattaggttt gttttttgcg tgagaatgta ttcagccact
     3361 ttttcaccaa agacgagcgt ttcaaggagg gagttactgg cgagacggtt agcgccgtgc
     3421 acacctgcat ttgcaacctc accaatggca tacaaaccgg gaatgttcgt tttacctgat
     3481 aggtcggtac gaataccacc cattaaaaaa tgtgcgccag gatgaaccgg aatccgcttt
     3541 gtttcacgaa acgggacgtg atatgcatcc aagttagcag taattcctgg aaaacgttct
     3601 tcaaaattag gaattggcgt gatatcaagg aaaacctcat tgccatcttg tatttctgca
     3661 aatagcgtcg cagcaacaat atcgcgcggc gcaaggtcag ctctcgggtg aacatcagtc
     3721 attaccgccg aaccatctgc gcgaataagt ttggctcctt caccgcggac cgcttctgaa
     3781 ataagcccat gacaacgtcc gtttagaaag agaagagtgg gatgaaattg gataaattcc
     3841 atatcggtta gcttagcacc agcccggtaa gccagtgcta aaccatcacc ggaaattgtc
     3901 gccgcattcg tcgtaactgg aaaaagttgt ccaagtccgc cgcttgctaa aataatatgt
     3961 tctccgtaat aagtatgtag tcgattttct ttatctaaac aatgcacgcc gatagccgaa
     4021 tcgttctgtt ttataatttc gatagccatt ttttgctctt gccagtgaat gtttgttaat
     4081 ttttcttgta aaaaagtagt aagaaatttg ccggtttgat caccgccagt atgtaaaatt
     4141 cgtggcaatt ggtgtgcgcc ttctaaacca agcgaaagtt caccattttg ttcgtcaaaa
     4201 gtcatccctt ctgcgattaa tttttggata acgattggac cgttggtaac gagttgattt
     4261 actgcgagaa ctttattatg aaaacaaccg gcttggaagg tatcgctaaa atgctttttc
     4321 ggggtatcgt ttttggacac agctgctgcg acaccgcctt gagcgagcat cgaattactt
     4381 tcttctttga gaccttttgt gattattgtc acatcatagt cgtgcattaa tctgaaggca
     4441 gcagtgcaac ctgcgatacc gctcccaatg ataatcactc gttcttttgt cattgtttcc
     4501 acctcttgca tagtaggttc gattaattgt atacttctta atgaatatac agatgtcttg
     4561 tcatctataa tcacataaaa tcaaactaaa ttcaagtata aaattttaag ggagagataa
     4621 agagatgatt tactttgacc atgcggctac tacgaaaatg agtgaagctt ctttacaagt
     4681 ttttatggat gcatcgcgag aattctttgc taattcggag agtttacatg atgctgggac
     4741 gaaatcagcg gcccttttag aaaaatgccg ggaaagtttt tctgagttat tacaagttcc
     4801 aaaccgcggg attttattta cgagtggtgg aacagagagt aatcaaattg ccatccaaac
     4861 gctaatccat acaactgata agaaagaagt gctcgtaagt ccgctagaac acgcttcagt
     4921 ttggcagcaa ctaatggcac tcgaacaagc ggggaagtgt cggattaaag tattaccagt
     4981 tgattcgttt gggcaagtaa atccagctac tttagaaaaa atgatttctg ctgagacggg
     5041 gcttattatt attcaacatg ttaattcgga aatcggaacc atccaaccaa ttgcggaact
     5101 agctcatatt gctaaaaaag caggtgtctt ttttcatacc gatatcgttc aatcctttgg
     5161 aaaaattgat ttagatttaa gtgatgccac tagttttagt atttcatcgc ataaaattta
     5221 tggaccaaaa ggggcgggaa tactttttat gaaaccagat tctcctttgc aggcagtttt
     5281 gccagatgta catcatgaat ttggctttag accggggaca gtaaatgttc cagctattgc
     5341 tgcctttaca actgccgcct atgatataat agaaaataga gaacaagaag cgattagagc
     5401 tatgaaacta aaagctgcga tttgcgacac attagaagcg cgagtagaag tggaaggtgg
     5461 acccaataca tcgccgtata ttttaggact tactttgcca aatatgcaag gtcaggaagc
     5521 gttacttgct ttaaacgaag cagatattca aatctcgacg acaagtgcat gtagtttacg
     5581 tgatttagct ccgtccagaa cattaatcgc tactggaaaa acaacagaag aagcaaaccg
     5641 ttttatccgc ttatcttttg gaagagaaaa tgaattaaac gatagtatta tttttaaaga
     5701 agaaatcgat aaattattac gaaaaaggtg ataagatgaa aaaaatatta ggagatacgc
     5761 gtaggcaaat gattttaaaa tggctaaaag aagccgaggc gccaatttct ggaaatcaat
     5821 tagcacagaa aacaaatgtt agccgccaag tgattgttca agatatttct ttgttaaaag
     5881 ctggcaatga accaattatg gctaccccac aaggctatat ttatgcgaaa gaaacaagtt
     5941 atacagggga aaggcgcgtt attgccgtga aacatacgaa agaacaagct gccgaggaac
     6001 taaatatttt ggtagatcac ggtgtttcca ttattgatgt gattgtggat catccaatat
     6061 acggcgaaat caccgcttca ctacatttaa aaagccgttt tgatgtagag aaatttgtgc
     6121 ggaaattgca aacaacagga gcaacaatgc tgtctggttt aacggatgga acacatttac
     6181 atacgattga agcagatacg aaagaacaat tagaacaagc gattaaggcg ctagataaag
     6241 ctggattttt aatctaacca tttttcaata taaattctag gaaaaagcta gtaactatgg
     6301 tagaatgtat gttaggtatt tataaacaaa tagtcgtatg gaggtgctag atatgccatt
     6361 atcgccgctg gatatacata acaaagagtt tacccgtggt tttagaggtt atgacgaaga
     6421 cgaagtaaat gacttcctcg atcaaatcat taaagattat gaacaagtta ttaaagagaa
     6481 aaagcgtatt gaggacactt taaataatag tgaagaacgt ttaggtcatt ttacaaacat
     6541 tgaagaaaca ttaaacaaat cattaatcgt ggcacaaaca gctgccgaag aagtgaaagc
     6601 ttccgctgaa aaagaagcaa aacttattat ccgtgaagct gaaaaaaatg cagaccgaat
     6661 tttaagcgac tcactttcta aagctcgtaa aatcgcgatt gaaattgaag acttaaaacg
     6721 tcaatctaaa gtattccgcg agcgtctgcg tatgttagta gaagcgcaaa tggatttaat
     6781 taaaagtgaa gattggcagc aaatgatggc ttacgatgta gatgcaacag aattagcgtc
     6841 tattaaagaa gtcgaagctg ctgaatcaga agaacgttaa aaacgattat aagagacaag
     6901 taaatttttt agacaaagga tatgaagcga gttggtaaat ggtgcgagac caactatcct
     6961 ctaaaaaata gaaatcactc tttagttcta acccgaaaaa gcaatcgctt gagtaagtgt
     7021 tagcgcgagc cagcgttatg gcattaatga agtgggcaag caacaaaatt gcatgtcaac
     7081 aagggtggta ccgcgaatct cgtccctttt ttgggagaga tttttttgtg tttaaaaata
     7141 aagatttaaa ggagaataga gtatggaata taaagatacg ttattaatgc caaaaacaga
     7201 ttttccgatg cgtggaaacc tgccaaacaa agaacctgaa tggcaagcaa aatgggaaga
     7261 agaaaaacta tatgagaaga ttcaagaaaa aaatgctgga cgcaaggcgt acattttgca
     7321 tgatgggcct ccttatgcta acggtgagct tcacatgggt cacgctctaa acaaaacaat
     7381 caaagatatt atcgtccgtt ataaatcaat ggctggcttc agctccccgt atgttcctgg
     7441 ttgggacaca cacggactac caattgagac agctatcgcc aaaaaaggcg ttaaacggaa
     7501 agaaatgtct attgctgaat tccgcaaact atgtgccgaa tatgcaatga cgcaagtaga
     7561 cggtcaacgt acaggattca aacgacttgg aattaacggt gactgggaaa atccttacat
     7621 tacactttta ccagaatacg aagcagagca aatcaaagtc ttcggtgaaa tggcgaaaaa
     7681 aggttacatt tacaaaggta aaaaaccggt ttattggtct ccttctagtg aatctgcgct
     7741 ggcagaagca gaaatcgaat atcaggataa aaaatctgct tcgatttttg ttgcctttaa
     7801 agttactgac ggaaaaggtg tactagatga aggaacgaat atcgttatct ggacaacaac
     7861 tccttggaca attcctgcaa acatgggtat tactgttaac cctgatttgg actatgtagt
     7921 aattgaatcc gctggggaaa aatatgttgt agcagaagca cttttaccaa gcttacgcga
     7981 aaaactaggc tttgaagatg cgacagtagt gaaaacagtt cgtggttctg aacttgaccg
     8041 cgttgtaact aaacacccat tctatgaccg tgattcctta gtaatgaacg gggaacatgc
     8101 tactgctgaa gccggtactg gtgcggttca tacggctcct ggacacgggg aagatgactt
     8161 tttaatcggg aaaaaatacg atttagaagt acttgctcca ctagatgatc atggtgtatt
     8221 cacagaggaa gcaccgggat ttgaaggcgt attttacgat acagcgaaca aaatggtcac
     8281 agaaaaacta gaagaagtgg gcgcattact aaaaatggaa ttcatcactc actcttatcc
     8341 acatgattgg cgtacgaaaa aaccagttat tttccgtgca acagcgcagt ggtttgcttc
     8401 gattgacgca ttccgtgatg atttactcgc tgctgttaaa ggtgttaatt ggactccagc
     8461 atggggtgaa acacgtttat tcaatatggt tcgcgaccgc ggcgactggg ttatttctcg
     8521 tcaacgtgca tggggcgttc cactaccgat tttctatgcg gaaaatgggg aagcgattat
     8581 cacagacgaa acaattaatc acatttctga acttttccgt gagcatggtt cgaatgtttg
     8641 gtttgaacgc gatgtgaaag atttattacc tgctggcttt acgcatccag gtagtccaaa
     8701 tggagaattt acaaaagaaa ccgatattat ggacgtttgg tttgattcag gttctagtca
     8761 tcaagctgtg ctgaatgctc gcccagaatt aagtcgtccg gctgatttat atatggaagg
     8821 ctctgaccaa tatcgtggct ggttcaactc atccttaaca actgctgtag caatcactgg
     8881 tgaagcgcct tatcgtaacg tgctaagcca tggtttcgca ctggatgggg aaggtcgcaa
     8941 aatgagtaaa tcacttggaa atactttact tccaggcaaa gtaattaaac aacttggtgc
     9001 ggatattgtt cgcctttggg ttgcttctgt agattatcaa gctgatgttc gtgttagtga
     9061 tgaaatctta aaacaagtat ccgaagtata ccgtaaaatc cgtaacacaa tgcgtttctt
     9121 actaggaaat attaatgact ttaatccaac tactaacgcc gtttcttatg aaaacttacg
     9181 tgaagttgac aaatatatgc taattaaatt aaatgattta gtgaaaaatg tgaaggataa
     9241 ctatgaagct ttcgaattct ctactattta ccaccaaatc aataatttct gtacagtaga
     9301 attaagccaa ttttatatgg actttgccaa agatgttgtt tacatcgaag cggctgatag
     9361 tcatgatcgt cgtgctatgc aaactgtctt ttatgaagcg gttgttacgt taaccaaatt
     9421 acttgctcca attttaccgc atacaacaga agaagtttgg aatagcttga ttggtgaagg
     9481 cgtggaaagt attcacttgc aagacttgcc agaggttaaa gtattagcgg atagcgaaga
     9541 aattacagcg aaatgggacg cattcatgca aatccgtgat aacgtccaaa aagcgttaga
     9601 attcgctcgt aacgaaaaat taatcggtaa atcaatgctt gctaaagtaa ctttatatgt
     9661 agacggcgaa gcgaaaacac tatttgattc tttagaaggc gattttgcac aactgtttat
     9721 cgtttctgac tttgaacttg tggaaggttt agaaaatgca ccagaatctg cattcaaatc
     9781 aaatcaagta gctgttcaaa ttaccgtagc agaaggcgaa acttgtgaac gttgccgtgt
     9841 agtgaaaaaa gatgtaggcg taaatccaaa acatccaaca ctgtgtggcc gctgtgcgga
     9901 tattgttgta aaacactacg aagcttaatg ctcgcttggg gaaaatccta ctcatttcaa
     9961 aaggaggttc cccaagcttt tttaatttaa gatgtggtat tatagacgta attccaaata
    10021 gaggaggttg cttgacgtaa tggaaacaat tcactttaca aaagtacatg gttcgcaaaa
    10081 cgattttttc ttagttgatg aagaggaaaa tcacatcaca gaatggtcgg atgaaaaacg
    10141 tgctaatttt gcgataaagc tttgcgatag aaagcactcg cttggcgggg cagacggaat
    10201 tttatatgtc acaaaaagca gtgaagttgg accaattggc caaatgcgtg tcgttaattc
    10261 agatggctca attgcttcga tgtgcgggaa tggcttaaga acggtagctc gctatttact
    10321 tgagaaacat gctttgacag atgcaaaagt agaaactatg aaagcgatac ttgatgtcaa
    10381 aaaagcaact tcgcttggtt ttgatattcc aacctatcaa gtggaaattt ctcctgttaa
    10441 atttgcagca gaaacattac cgatgcatgt aggcgtggaa aaattattta atcaagttat
    10501 cccagaactt gatgcagaac tcgctttttc tgctgtttct gttcctaatc cgcatttgat
    10561 tacatttgtg gaccaagctg tgctagattc cgataaacaa gaaaaattag caagttattt
    10621 aaatagcgaa aatccgtatt tcccagatgg cgtgaatgta agctttgtga aacgtttaag
    10681 cgatgatgct atttatgtgc gtacttttga acgcggcgtc ggttttacga atgcatgtgg
    10741 aacagcgatg tcggcttgta gtttgattaa aaaaatgtta gataatgata tattggaaac
    10801 gccgctaaat gtttataatg atggcggaag agtgcaagta actgcgaaaa aagatgctgc
    10861 tggtgaaatt tcgctacaac tgattggcaa tgccactttt gttagcaaag gttccgttcg
    10921 ttatgaaaat gatgtcgtta cagagcttac aaatgaagcg acagctgaac aagctcagta
    10981 tcaggcgctt gtaaaagaag taaaagaatt tctaaaaaca accgaatgaa aaggagttaa
    11041 ccatgaatac aaatcgtaaa aaagcaacac cgttattcgt tattggcgga ttttgcctta
    11101 ttttatttat tactatcgct tccgctatcg caacagaaag taactgggta gcacgttttg
    11161 acttaagctg gattgaaaaa atccgcggcg gcattcaacc ggataaaaca gccattgtta
    11221 aatttctaac tactttagga agcgcagaaa cgacaattat tttgactatc gtagtcgttc
    11281 ttattttatt ctttttacga aaatttgttg tcggactttg gtttggtgga acgatgcttg
    11341 tttgtggagt agtcttaaat cttgtcttga aaagtttggt tggtcgtacg cgtccagcta
    11401 gcgtgaactg gttagtaagc gagtcaggct ttagtttccc aagtggacat gcgacggcaa
    11461 cggctgtttt ttatggtctt gcagcgatgt tcttgatttt catagtgcca aaaatgtggc
    11521 aaaaaatcgt tatcggtatt atcggttatg gttttatcct gtttgtcatg tatacacgcg
    11581 tttatcttgg tgtgcatttc ccgacggatg tacttggtgg atttttcctt ggtacagcat
    11641 cggtatttat ctcactaggc gtttatttct tagtacgaaa accattacat aatttacttg
    11701 tgaaatggcg
//
LOCUS       DASDYK010000090        11599 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.090, whole genome shotgun sequence.
ACCESSION   DASDYK010000090 DASDYK010000000
VERSION     DASDYK010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11599
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.090"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            17..1042
                     /locus_tag="U0308_002216"
     CDS             17..1042
                     /locus_tag="U0308_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2317177.1"
                     /translation="MKKVTMQDIADRLNITKNSVSQALGNKNGVSEQTKLAVFKMADE
                     LGYKYKREIAREVVKEKFALLATSFALSQRSFFGEIIDNMKQSIIAHQAELIIFPVTD
                     EEASTNQLPEQLTSENWTGIFLLSHINTDYSKKVIDLGMPVVLIDHHDPHLKADAVIS
                     QNKDGAFMAVEFLIQNKHQKIGFLGDVTFSPSYEERLEGYKKALHYYHIPFNEKYAIT
                     RIKEEQTTLYRTLDELDELPTAWFCVNSGLGFILNTYLQSKGYNIPNDLSIICFDNTE
                     FTVLSNPQLTTMCTNLSYMGEKAVELMYNRIRKPDEGFVHLALATNLIARDSVGENKK
                     ADSASES"
     gene            complement(1054..1767)
                     /locus_tag="U0308_002217"
     CDS             complement(1054..1767)
                     /locus_tag="U0308_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEM2317178.1"
                     /translation="MVACLCIHGFTGSPSEVKPLADYLREHTDWDVLAPTLPGHDHLR
                     HLKNVTYKDWIVFVDSILSQMLKEDDEVYIIGFSMGGLLAGWLARHYPEVKKLVLLST
                     AVNAMEWPQLVENSKQVLTEAKEVTLKNSPMFKRYQKKVTETPWTSTLQFKKMVALAK
                     PVFEHIEIPTFIAQGSADQVVPAEKSVNFLMESIPGPKELFILEGSKHVICQDEQADK
                     LFAAVLTFLQKDVAVLNAQ"
     gene            complement(1834..3207)
                     /locus_tag="U0308_002218"
     CDS             complement(1834..3207)
                     /locus_tag="U0308_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEM2317179.1"
                     /translation="MKKTVGEVVAMLDSSIHVDAFRDVVITGVCFDTRQIKSGDLFVP
                     FVGNVRDGHEFVSQAREMGAVATFWQKDVPNPPMDFPVILVEDTLLALQELAAKYIQQ
                     VKPKVIAITGSNGKTTTKDIMAAIVETTYKVHYTGGNFNNHIGLPYTILTMPEDTEVA
                     VLEMGMNHRHEIEVLSKIAKPDIAIITNIGEAHIEYLGSREEIAKAKLEITAGLNPSG
                     ILIYPHEETLLLGNINGDFRQLTFGKSEAAEIYPLEIRAEAEGTSFITNWEPELEIFV
                     PIIGEHNVFNTMAAMLAAREIGIEGEKIQSALKNMERSKSRLEWITTKSGARILNDAY
                     NSSPTALKTVLKTFMHMDSSGKPKYLVLADMLELGDLSTKLHQESAEVLEKGMIEKIF
                     LYGEAMKAFGDIAEAKIGQGKVHHFNTKESLETALLSEMNGNEWILVKGSYGMGLKDV
                     VENLIIK"
     gene            complement(3271..4383)
                     /locus_tag="U0308_002219"
     CDS             complement(3271..4383)
                     /locus_tag="U0308_002219"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEM2317180.1"
                     /translation="MKTKLILLYGGKSAEHEVSLQTAFSVINALDLEKFEAAPIYITN
                     EGEWIQGPLLSGKLDFVEQLRFSATDTIKLATTESEKSEGEAISPAVLEADGQETVVF
                     PLLHGPNGEDGTVQGLFEVLNIPYVGNGVLASSAAMDKIVMKKIFADAGIPQVPAVAV
                     RLIDWKNYQAEMVAEMEEVLTYPVFVKPANLGSSVGISKATNKKELADAMTEAFLYDR
                     RVVVEQGVVAREIEMGVLGNDTPVCSVPGEILPEGAVATFYDYKAKYQDNNTALIIPT
                     EVDPEILEQMKEYAVQAFLGLDASGLVRADFFLTEDNQLFLNEVNTMPGFTPYSMYPL
                     LWQETGLPYGALIERLVDLAKERHAAKNALKYKLED"
     gene            complement(4533..4853)
                     /locus_tag="U0308_002220"
     CDS             complement(4533..4853)
                     /locus_tag="U0308_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEM2317181.1"
                     /translation="MDWIFLLVAGLCEMVFVVMLKLSDGFKKVGYAILTIIFMSASFF
                     LLSLALKTIPIGTGYAIWTGIGAVGSVTLGMIVFKERKSVGKLLFITMIIAGVVGLKL
                     TSGV"
     gene            complement(4856..5197)
                     /locus_tag="U0308_002221"
     CDS             complement(4856..5197)
                     /locus_tag="U0308_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEM2317182.1"
                     /translation="MAWFYLIMAGLSEIVWAFGLKESHGFTMLGWSLLTIAFLIVSFG
                     LFSISMKSIPIGTAYAVFTGIGAAGTAIIGMIFLSEGVSFWKIVSLIVLLTGIIGLKL
                     VDGNESEKEAK"
     gene            complement(5214..5768)
                     /locus_tag="U0308_002222"
     CDS             complement(5214..5768)
                     /locus_tag="U0308_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2317183.1"
                     /translation="MTKKLIKEVALTLFAEKGYDGTALSEIAKAVGIKTPSLYAHFAS
                     KEALFLEVYQDSIQMELTELGKVAERDDLVGEKKLQSIFFVATDFSSNPDEKKFFQRA
                     VFYPPKSLFQELKEETKTYEQLTNRILRETLEKIVSEEALVRWMHVFYALLDGLSVEH
                     GIYDETEFELRRKSAWAVLASLLK"
     gene            complement(5848..6606)
                     /locus_tag="U0308_002223"
     CDS             complement(5848..6606)
                     /locus_tag="U0308_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317184.1"
                     /translation="MKKEAVNQQSIYVHIDHVINNVATSGISFCDFLNGVGQPPENIL
                     LIKHNIEDASYNAHTAFHYLEPGDLANISKENFNPLCWIDFEDVELLNQLTPQEVAEM
                     LYLAHTGRHLRSPFYYKLQNNFVYLTREDGRYNKVYYRNLNHFYMLLSYVIARKTAEL
                     VNEKGIFSFGKKKYVAEPPVELLKKMADHFKDGACIALDDVVRTRTQIEVPIGHGLTE
                     EMTELEISSKIYYEEEVAKLVYDLKQNEWKYIEK"
     gene            complement(6826..6972)
                     /locus_tag="U0308_002224"
     CDS             complement(6826..6972)
                     /locus_tag="U0308_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317185.1"
                     /translation="MDNNQKDLNQVIRQLKEKGIVVEKTKSRKDIWKAVSNKAMPNMT
                     LRLQ"
     gene            7539..9386
                     /locus_tag="U0308_002225"
     CDS             7539..9386
                     /locus_tag="U0308_002225"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464375.1"
                     /note="catalyzes the hydrolysis of a monocarboxylic acid
                     amid to form a monocarboxylate and ammonia; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEM2317186.1"
                     /translation="MKRRILLTITAVCTVFSIVGGYVFFTSQQTTTSENKSAVSKKKP
                     PTTKNEKPKQPPNKLTLGKNKENSHLEKNFGGKQLQVEGIDDRAFQSSLKKRTEIKLK
                     PEKAPPKKQDIKPVKPIPSKPEKEEDSSSPIYEKARIMTPINNQLDKLDLAVLEAKEP
                     LIIGADVTKLQQLIATKQLSYKELAGIYLNRIKKYDQNGLTLNAITEINPTIIAEAEQ
                     LDKDNSANKSALYGMPVLLKDNIGTKELPTSAGTVALKDWVIGEDATIVENLKANGAL
                     ILGKTNMSEWAAGMDEELPNGYSGKKGQSKNPYSSDLDPSGSSSGSATGATSDFAAIA
                     IGTETNGSIIIPASAQSAVGYKPSQGLINNKGIIPLSSRFDTPGPLTRTVNDAYLTTN
                     ALINTTSNPPLSTDSLQGKRIGLLADGESNEETAVIKKIKYDLKKAGAIIIEGVAVGE
                     FEQLDTDYALLLNADFKHDLNQFLNVNNAPMTTLESIIQFNQTNPARNMKYGQSELVK
                     SQQSTTTKLQADSLASNLIQEAQNELDSMLQKDKLDAVVTIGMGGSVTFLAPIAGNPE
                     LTIPAGYDEETNQPISLTFITARNSDTTLLNMGYSYEQQSKNRKSPNLK"
     gene            complement(9434..10162)
                     /locus_tag="U0308_002226"
     CDS             complement(9434..10162)
                     /locus_tag="U0308_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM2317187.1"
                     /translation="MTKLKVTGLKKSFGANEVLKGIDIEVKEGEVVCVIGPSGSGKST
                     FLRCMNNLEEITAGEVVVDDFNITDKKVDINKVRENIGMVFQHFNLFPHLSVLENITL
                     APVELKKMDKEAAKSNALRLLEQVGLREKAEEFPNQLSGGQKQRVAIARALAMDPDIM
                     LFDEPTSALDPEMVGEVLGVMKELAKGGMTMMIVTHEMGFAREVGDRVIFMDGGYIVE
                     EGKPADIFDNPTNERTISFLDKVL"
     gene            complement(10155..11597)
                     /locus_tag="U0308_002227"
     CDS             complement(10155..11597)
                     /locus_tag="U0308_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein/permease"
                     /protein_id="HEM2317188.1"
                     /translation="MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEETYLIGTDTTFA
                     PFEFEKDGEHVGIDMDILKAIAKDQNFKYEIKAMGFNAAVQALEANQVDGVIAGMSIT
                     DERKQKFDFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKIKDK
                     YDFDIVVFDDSAQMYDDVKTRNSVACFDDYPVLAYGVQTGNGLKIVTEKEKGNSYGFA
                     VNKGKNQELLEKFNAGLVNIKASGEYDKILENYLGKNAIKENTTEKGFMGIIKSSWPA
                     LLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAF
                     FFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQMEAARSLGLPH
                     KKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMARTFESTW
                     TWLIIGIMYLIVITILTKISDRLERRLRND"
BASE COUNT         3642 a         2444 c         1867 g         3646 t
ORIGIN      
        1 aaaacggagg ggaaccatga agaaagttac gatgcaggat attgctgaca ggctaaatat
       61 aaccaagaat tcagtctcgc aagctttagg caataaaaat ggggttagcg aacaaactaa
      121 actagccgtt tttaagatgg cagatgagct aggctataaa tataaaagag aaatcgcgcg
      181 tgaggttgtg aaagaaaaat ttgcgctttt agcaacttct ttcgcccttt cgcagcgcag
      241 tttttttggc gaaattatcg ataatatgaa acaaagcatt atcgctcacc aagccgaact
      301 tattattttt ccagttacgg atgaggaagc gtctactaat caattaccag agcagctcac
      361 aagcgagaac tggactggga ttttcttact ttcgcatata aacacggatt atagtaaaaa
      421 agttatcgat ctcggcatgc ccgttgtgct tatagatcat catgatccgc atctaaaagc
      481 cgacgcggtt atcagtcaaa ataaagatgg tgcttttatg gctgtagaat ttttaattca
      541 aaataagcat cagaaaatcg gttttctcgg tgatgttact ttctctccaa gttatgaaga
      601 gcggctagaa ggatacaaaa aagctttgca ctactatcac attcctttta acgaaaaata
      661 cgccatcact cgtatcaaag aagaacaaac gacattatat agaactttag atgaactgga
      721 cgaactccct actgcttggt tttgtgtcaa ctcaggactt gggtttattc tcaatactta
      781 tttgcaatca aaaggctata atatccctaa tgacttatcg attatttgct ttgataatac
      841 cgagtttact gtactaagca atccacagct aactacaatg tgtaccaacc taagctatat
      901 gggtgagaag gctgtcgaac tcatgtataa tcgcataaga aaaccagatg aagggtttgt
      961 tcatctggcg cttgctacta atttaatagc ccgagattct gttggtgaaa acaaaaaagc
     1021 cgattcagcg agtgaaagct gaatcggttt tctttattga gcatttaaaa cagcgacatc
     1081 tttttgcaaa aatgttaaaa cagctgcaaa taatttgtcc gcttgttcgt cctgacaaat
     1141 cacgtgtttc gaaccttcta atataaataa ttcttttgga ccaggaatac tttccattaa
     1201 gaaattaaca cttttttcag caggaactac ttggtcggca ctgccttgtg caataaaagt
     1261 tggaatttca atatgctcaa aaaccggctt tgctaaagct accatttttt tgaattgtag
     1321 cgtggaagtc caaggcgttt ccgttacttt cttttgataa cgtttgaaca tcgggctgtt
     1381 tttgagcgtt acttcttttg cttccgttaa tacttgcttg gaattttcga caagttgcgg
     1441 ccattccatt gcatttacgg ctgtgctcag aagtactagt ttttttactt ccggataatg
     1501 tctcgcgagc catccagcga gcagtccacc catggaaaaa ccaataatat atacttcatc
     1561 gtcttctttt agcatttggc ttaaaatact atctacaaaa acaatccaat ctttatacgt
     1621 cacatttttt aagtggcgca ggtgatcatg gccaggtaat gtgggtgcta aaacatccca
     1681 atctgtatgc tctcgcaaat agtcagcgag cggcttcacc tcggacggcg aaccagtaaa
     1741 accatgaata cacaaacaag caaccattat gcctttcctc ctgtccaaat tattaccaat
     1801 taagcggtaa tatgttctgt ccaattttag tcgttactta ataataagat tttctaccac
     1861 atctttcaag cccattccgt aagaaccttt gaccagtatc cattcatttc cattcatttc
     1921 tgaaagaagc gccgtctcaa gcgattcttt cgtgttaaaa tgatgaactt ttccctgacc
     1981 aattttggct tccgctatgt caccaaaagc tttcatcgcc tcaccataca agaaaatctt
     2041 ctcaatcata cccttttcta atacttcggc tgattcttga tgtaactttg tcgacaaatc
     2101 tccaagttcc aacatatcag caaggaccaa atatttaggt ttgccgctcg aatccatatg
     2161 cataaatgtt tttaaaaccg tttttaatgc tgttggacta gagttataag cgtcattcaa
     2221 aatacgcgcg ccacttttcg ttgtaatcca ttctaaacga cttttagaac gttccatatt
     2281 tttcagcgca gattgaattt tttcaccttc aattccaatt tctcttgccg caagcatcgc
     2341 cgccattgta ttgaaaacat tatgttcacc aataataggg acaaaaattt ctagctccgg
     2401 ctcccaatta gttataaaag aagtgccttc cgcttccgca cgaatttcta acggataaat
     2461 ttccgcagct tccgacttac caaaagtaag ttgtctgaaa tcgccattaa tatttcctag
     2521 cagcaaagtt tcttcgtgcg gataaattaa aatcccgctt ggattaagcc cggcagtaat
     2581 ttccagtttt gctttggcaa tttcttcacg cgaaccaaga tattcaatat gcgcctcgcc
     2641 gatattcgta ataatcgcga tatcgggttt ggcaattttg gaaagcactt cgatttcatg
     2701 acgatgattc atgcccattt caagtacagc aacttcggta tcttctggca tcgttaaaat
     2761 ggtgtacggt aagccgatat gattattaaa attcccacca gtataatgca ctttgtacgt
     2821 tgtttctaca atcgctgcca ttatatcttt tgtcgtcgtt ttaccattgc ttccggtaat
     2881 cgcaataact tttggcttta cttgttggat atatttcgcc gctagttctt gaagtgcgag
     2941 caaagtatct tctactaaaa taaccgggaa atccatcggt ggattgggta catctttttg
     3001 ccagaaagta gccactgcac ccatttctcg cgcttgactc acaaattcat gtccatcgcg
     3061 tacattccca acaaatggaa caaataaatc ccctgacttt atttgccttg tatcaaaaca
     3121 aacgccagta atgacgacat cgcgaaatgc atctacatgg atggaactat ctaacattgc
     3181 tactacttcg cctactgttt ttttcaaatt aaatctctct cttccataaa aaagcagctt
     3241 ccgcatatga aaactgcttt cttgtttatt ttagtcttct aatttatatt taagtgcatt
     3301 tttggctgcg tggcgttctt tcgctaaatc gactaatcgt tcaattaacg ctccgtaagg
     3361 taagcccgtt tcctgccaaa gaagaggata catgctgtac ggtgtgaaac caggcattgt
     3421 attcacttca tttaagaata actgattatc ttccgttaag aaaaagtccg ctcgcactag
     3481 tccgcttgca tcaagcccta ggaatgcttg aaccgcatat tctttcattt gttccaagat
     3541 ttccggatct acttcagtcg gaataattaa cgcagtatta ttatcctggt attttgcttt
     3601 gtaatcgtaa aacgtagcaa ctgcaccttc tggcaaaatt tcacccggaa cagagcaaac
     3661 tggcgtatca tttccaagta cgcccatttc gatttcgcgc gcaacaacac cttgttcaac
     3721 aaccacacga cggtcatata aaaatgcttc tgtcattgcg tccgctaatt cttttttgtt
     3781 cgttgcctta ctaataccaa cactcgaacc aaggtttgct ggttttacga aaactggata
     3841 ggtaagtact tcttccatct ccgcaaccat ttccgcttga tagttcttcc aatcaattaa
     3901 tcgaacagca actgctggaa cttgcgggat tccagcatct gcaaagattt tcttcatcac
     3961 gattttgtcc attgcagcag aagatgccaa gaccccgtta ccaacatatg gaatgtttaa
     4021 tacttcgaac aatccttgaa cagtgccatc ttctccgttt ggaccatgta aaagcgggaa
     4081 tacgactgtc tcttgtccgt ctgcttctaa aacggccggg ctaatcgctt ccccttctga
     4141 tttttctgat tcagttgttg caagttttat tgtatctgta gccgaaaaac gtaattgttc
     4201 aacaaaatct aacttcccag aaagaagtgg tccttgaatc cactcacctt cattcgtaat
     4261 atatattggc gcagcttcga atttttctaa atccaaagca ttgataactg aaaatgctgt
     4321 ttgtaaggaa acttcgtgtt cagcagattt cccaccgtat aacaaaatta atttggtttt
     4381 cataataccc ctccgtcatt attcgcttta tctattttac catgttttga caggatgaaa
     4441 aggtataact aaaaaatagg ttgaaaaaat cttctttttt aaataagaac cgtgcacgct
     4501 tattccaaaa aggacttttt caacctaaaa tattaaacac cagatgttaa tttcaaaccg
     4561 accacgccgg caataatcat cgtaataaag agcaatttgc cgacactttt acgttcttta
     4621 aaaacaatca ttccaagtgt cacactacca acggcaccaa ttccggtcca aatcgcataa
     4681 cctgtaccga ttggaatcgt cttaagcgcg agggatagta aaaagaaact tgcagacata
     4741 aaaataatcg tcagtatcgc atatccaacc tttttaaagc catctgataa ttttagcatg
     4801 acaacgaaga ccatttcgca taaacctgct acgagtaaaa atatccaatc catcgttatt
     4861 tagcctcctt ttcagactca ttgccgtcca ctaatttcaa accaataatc cctgttaata
     4921 atacgataag cgaaacaatc ttccaaaaag aaacaccttc tgaaaggaaa atcatcccaa
     4981 taatcgctgt cccagcagcc ccaattccag taaaaaccgc atacgccgtc ccaattggaa
     5041 tggacttcat ggaaatcgaa aacaaaccaa aactaactat caaaaatgct atcgtcaaaa
     5101 ggctccaccc taacatcgtg aaaccatgcg attcttttag tccaaaagcc caaacaattt
     5161 ctgataatcc tgccataatt aaataaaacc aagccaattt ccttacctcc aattcatttg
     5221 agtaaacttg cgagaactgc ccaagcagat tttcttcgca actcaaattc cgtttcatca
     5281 taaatgccgt gttccacact cagtccatca agaagtgcat aaaaaacgtg catccatctt
     5341 acaagtgctt cttcggatac tattttttct aacgtttcgc gtaatatccg attcgtcagt
     5401 tgttcatatg tctttgtttc ttcctttaat tcttgaaaaa gcgacttagg tggataaaag
     5461 acggcacgct ggaaaaattt cttttcatca ggattgctag aaaaatctgt cgctacaaag
     5521 aaaatagatt gtagcttctt ttccccaacc aaatcatctc gctctgctac tttccctagt
     5581 tctgttaatt ccatctgaat actatcttga taaacttcta aaaatagggc ttcttttgat
     5641 gcaaaatggg catataacga tggtgtttta attccaacag ctttcgcgat ttccgaaagc
     5701 gctgttccat catagccttt ttctgcaaaa agagttaatg cgacttcttt gattagcttt
     5761 ttcgtcataa agcaccctcc taactaacgt tcattagtta aattttaaca aataaaaaac
     5821 caaacgtaaa ggaaaaagtt tgatttttta tttttcgata tatttccatt cattttgttt
     5881 taaatcatac actaattttg caacttcttc ttcataataa atcttagaag agatttctag
     5941 ttctgtcatt tcttctgtga gtccatgccc aattggtact tcgatttgtg tgcgcgttct
     6001 cacgacatca tcgagcgcaa tacaagcacc gtctttaaaa tgatctgcca tttttttcaa
     6061 aagttcaact ggcggctccg caacatattt tttcttacca aacgaaaaaa tacccttctc
     6121 attaactagt tctgccgttt tacgtgcaat gacgtaactt agtaacatat aaaaatgatt
     6181 aagattccga taatatactt tattgtaacg accgtcttcc ctagttaagt aaacaaaatt
     6241 attttgtaat ttataataaa atggtgagcg caaatgacgc ccagtatgtg caagataaag
     6301 catttccgct acttcttgtg gggttagttg gttcaaaagt tctacatctt caaaatcaat
     6361 ccaacacagt ggattaaaat tctctttgga aatatttgct aaatcgcctg gctctaagta
     6421 gtgaaaagct gtgtgtgcat tgtaggatgc gtcttcaata ttatgcttaa ttaacaaaat
     6481 attttcaggg ggctgtccca cgccatttaa gaaatcacaa aaagaaatgc cgcttgtcgc
     6541 cacattatta ataacatgat caatatgcac ataaatagat tgttggttaa ccgcttcttt
     6601 tttcatgtat atgcctcact ctatttctat tttcttctat gacaaaagcc ttccattcca
     6661 tcatacaaca tttttgcgta aaaaggataa cagaaacatc aaaacttaat gactaattta
     6721 tgacaaagaa aaaaagtgaa gttattttat atgtaaatca tgctgctttg agtcatttta
     6781 cttcaaagcc tcacaaaata tcacataaaa actccacttt tcgatttact gcaatcgaag
     6841 tgtcatattc ggcatcgctt tattactaac cgctttccaa atatcttttc gtgattttgt
     6901 tttttcaact actattcctt tttctttgag ctgacgaatt acttgattca agtctttttg
     6961 attattatcc aaactcatca ctccatcttc aaaatttgtt ttcattcttt tattttttct
     7021 ctctttcctt actttaacat attctcttta ctaagaatac cctattaatt aaaaaactaa
     7081 ccattatctt ctcttttttt caagaaagcg tttgaaaccc gaattttttt agttattttc
     7141 cagttaatat aaagaaaaac accaaaaatc tatacttcag ctatgctttt ataatcattt
     7201 cagggcaaat atgtaaaggt gtttcctttt tagtataaaa taaaatccca agaaataggc
     7261 gtttaattgg taaattttat tggaattgtg tcttttttat gaagttttac aatcactgaa
     7321 ccattattta ctttcaagtc attgttataa tgccatttcc tctttttcaa agaagtcata
     7381 tctaagaaaa aacacttaaa aacggctact attggttcca attcattgct taaataagcc
     7441 ctttttaaaa aattttttag ttttcacaaa attgtcactg atttactttt tttgatgcta
     7501 tataattaaa ttacatattt aaacatcgga ggaatcgcat gaaaagacgc attttattaa
     7561 caatcaccgc agtttgtaca gtttttagta tcgtcggtgg ctacgtattc tttacgagtc
     7621 aacaaactac tacatcagaa aataaaagtg ctgtttctaa aaaaaagcca ccaaccacaa
     7681 aaaatgaaaa accaaaacaa ccaccaaaca aattaacact tggcaaaaat aaagagaact
     7741 cccatttaga aaaaaacttc ggaggtaagc aattacaagt cgaaggtata gacgaccgag
     7801 ctttccaaag ttcgctcaaa aaaagaaccg aaattaaact gaaaccagaa aaagcaccac
     7861 caaaaaaaca ggacattaaa ccagtaaaac caataccaag caaaccggaa aaagaagaag
     7921 attcatctag tcccatttat gaaaaagcgc gtattatgac gccgattaat aatcaattag
     7981 ataagttaga tttggctgtt cttgaagcaa aagaaccact tatcattggt gctgatgtta
     8041 caaaactcca acaactcatt gcgacaaaac aacttagcta caaagaatta gccggtattt
     8101 atttaaatcg aatcaagaaa tatgaccaaa atggcctaac tctaaatgca ataaccgaaa
     8161 tcaaccccac tattattgcg gaggcagaac aactagataa agataattca gccaacaaat
     8221 ctgctttata cggtatgcca gtccttttaa aagataacat cggcacaaaa gaactcccca
     8281 caagtgctgg gactgttgct ttaaaagatt gggtaatcgg ggaggacgct acaattgttg
     8341 aaaatctaaa agcaaatggt gctttaattc tcggaaaaac caatatgtct gagtgggcag
     8401 ctggaatgga cgaagaactt ccaaacggct actcaggtaa aaaaggccaa agcaaaaatc
     8461 cttattcgtc ggacttggat ccctctggtt cgagttctgg atccgctact ggagcaacaa
     8521 gtgattttgc agcaattgca atcggtacag aaacaaatgg ttcgattatt atacctgcgt
     8581 ctgctcaatc tgctgttggg tataagccat ctcaaggttt aataaataac aaaggtatta
     8641 ttcccttatc aagcagattt gatacacccg gaccactaac aagaactgtt aatgatgcct
     8701 atttgacgac aaatgctcta ataaatacta cttccaatcc accgctttct acggattctc
     8761 ttcaaggtaa acgtatcggt cttttagcgg atggcgaaag caatgaagaa acagcagtta
     8821 taaaaaaaat aaaatatgat ttgaaaaaag caggtgctat tatcattgaa ggtgttgcag
     8881 taggtgaatt tgaacagtta gatactgatt atgccttatt actaaatgct gactttaaac
     8941 atgatttgaa tcagtttttg aatgtgaaca acgctcccat gacgacgtta gaatcaatta
     9001 ttcaatttaa tcagaccaac ccagcgagaa atatgaaata cggccaatcc gaacttgtca
     9061 aatcacaaca aagcacaact acgaagctac aagcagacag tttggcgagt aatttgattc
     9121 aggaggcgca aaacgaactt gactctatgc ttcaaaaaga taaactggat gcggtcgtaa
     9181 caattggcat gggaggttcc gtgacgtttc tagcacccat tgcaggaaac ccagaactga
     9241 ctatcccagc tggctatgat gaagaaacaa atcaaccgat tagcttaact tttattacag
     9301 ctagaaatag tgatacaacc ttattaaata tggggtattc ctatgaacaa caatcgaaaa
     9361 acagaaaaag tcctaattta aagtaaaaaa agcaagatgc ttttggaaat tccaaagtca
     9421 tcttgctttt tgtttataat actttatcta agaaactaat cgttctttcg ttggttgggt
     9481 tatcaaaaat atcagccggc ttgccttctt caacaatata gccaccatcc ataaagataa
     9541 ctcggtcgcc aacttcacga gcaaaaccca tttcgtgtgt aacaatcatc atcgtcatgc
     9601 cgcctttagc taattctttc ataacgccta aaacttcccc taccatttct ggatcaagcg
     9661 ctgacgttgg ctcatcgaac aacataatat caggatccat tgcaagtgct ctcgcaatcg
     9721 ccacccgttg tttttgtcca ccagacagtt gattaggaaa ttcttctgct ttttctcgta
     9781 agccaacttg ttctaataaa cgtaaagcat tacttttcgc ggcttcttta tccatttttt
     9841 tcaattcaac aggtgctaat gtgatatttt ctaaaacaga caaatgcggg aaaagattaa
     9901 aatgttggaa aaccatgccg atattttcgc gaactttatt gatgtccact tttttatccg
     9961 taatattaaa atcatcgacc actacttcgc cagcagtaat ttcttccaag ttattcatac
    10021 aacgaagaaa tgtactttta ccagatccag aaggtccgat gacacaaact acttcgcctt
    10081 cttttacttc tatatcaatg ccttttaaga cttcatttgc gccaaaactc tttttcagtc
    10141 cagttacttt aagtttagtc atttcgtaat ctcctttcta aacgatcgga tattttcgtt
    10201 aaaatggtaa taacgataag gtacataatt ccgatgatta gccatgtcca agtactttcg
    10261 aatgtacgcg ccataatgat tttacccgat tgtgttagtt cgacgagtcc aatggccgac
    10321 ataattgatg tatctttaag cgtgataaca aattggttaa taaaggatgg aatcatcatt
    10381 cgaattgctt gcggtagaac aactttcatc atagcttttt tatgtggtaa accaagactt
    10441 cttgctgctt ccatttgtcc tttgtcgact gattgaatac caccgcgaac gatttcgacc
    10501 atgtaggcac cggcgttcaa gcttagcgcg ataaccccgg ctaagaatac aggcatcctg
    10561 aaatcaagtg ctgctggaat accaaagtag aagaagaatg cttgtacaat taatggtgtt
    10621 ccacggaaga tatcgacata aacagtcgca atcccgcgca agattttgct attgctcact
    10681 ttcataaatc cgaatgtaat cccaataatg aaggcgatta ttagcgaaac tacggctaat
    10741 ctaatcgtca accacaaacc ggataatagt gctggccaag aagatttaat aattcccata
    10801 aagccttttt cagttgtatt ttctttaatc gcatttttac ctaagtagtt ttctaaaatt
    10861 ttatcatatt cgccgcttgc tttaatatta actaatccag cattgaattt ctctaaaagt
    10921 tcttgatttt tgcctttgtt gacagcaaaa ccataggagt ttcctttttc tttctcagta
    10981 acaattttta aaccgttacc tgtttgaacg ccgtaagcta gtacgggata atcatcaaaa
    11041 catgctacag aatttcttgt tttaacatcg tcatacattt gagctgagtc atcaaacaca
    11101 acgatatcaa agtcgtattt atctttgatt ttttctgcga aggcgtaacc ttctgtacct
    11161 gttttaacag ctactttttt tccttttaag tcgtcgtaag ttttgatttc gtcgttatct
    11221 ttcaaaatcc ccataacgac accagaatca aagtatggat cggagaaatc aaacttttgc
    11281 ttacgttcgt ctgtaatact catcccagcg ataacaccgt ctacttggtt agcttctagt
    11341 gcttgtaccg ctgcattgaa tcccattgct ttaatttcat atttaaaatt ttggtctttt
    11401 gcaattgctt ttaggatgtc catatcaatt ccgacatgtt ctccatcttt ctcaaattca
    11461 aaaggtgcaa aggttgtgtc tgtaccaatc aagtaagttt cttccgcagc ttttgcattt
    11521 aacccgtttc ctgtgaaaat aaatgcggca acacaagcga ttgccatcat tagtatgaag
    11581 cgtgaaaatt tcttcatat
//
LOCUS       DASDYK010000091        11501 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.091, whole genome shotgun sequence.
ACCESSION   DASDYK010000091 DASDYK010000000
VERSION     DASDYK010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11501)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11501)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11501
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.091"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..493
                     /locus_tag="U0308_002228"
     CDS             <1..493
                     /locus_tag="U0308_002228"
                     /EC_number="2.7.7.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="D-ribitol-5-phosphate cytidylyltransferase"
                     /protein_id="HEM2317189.1"
                     /translation="VVIEGGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTH
                     RIIEENIDAALETGAVDTVIEALDTIVESSNHEVITDIPVRDHMYQGQTPQSFNMKKV
                     FNHYQNLTPEKKQILTDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQERI
                     AND"
     gene            486..1511
                     /locus_tag="U0308_002229"
     CDS             486..1511
                     /locus_tag="U0308_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEM2317190.1"
                     /translation="MINQVYRLVSERQFEVANVDESLTGDVVVVRPTHLSICAADQRY
                     YTGSRGKEMLSKKLPMALIHEGVGEVVYDATKEFKPGTKVVMIPNTPFENDPVIAENY
                     LRSSKFRSSGYDGLMQDYVFMRRDRVVALPDDINMKVAAFSELISVAVHAILRFEGKS
                     NANRESFGVWGDGNLGFITSLLLKNWYPDSKVYIFGKTPYKLDFFSFVDGAYAIDDVP
                     ADLVIDQAFECAGGMGSQYAVSQIIDVIKPEGTISLLGVSEYPIEFNSRMVLEKGLTV
                     YGSSRSGRVDFEKTVEFLSTNKRGVEYLQNLVGEVHTVHSIQDVIEAFEADLRSPWGK
                     SVMEWKI"
     gene            1654..3033
                     /locus_tag="U0308_002230"
     CDS             1654..3033
                     /locus_tag="U0308_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM2317191.1"
                     /translation="MKFAIIMPFYNAEKRLALSIDSIIKQSYSFLKHVEVLLINDGST
                     DGSGAIANRYATKYPNNIRVLTVPNGGPAKARNIGIHNVSEDTDFVGFLDADDIMSEN
                     MLASIVTFLNESNVSMLVPAFYYLDDFGSKKKISPHKLNYRFANGNRVADIEKEPEAI
                     HFYIGGTFLRYDCLKEFTFDESLYFAEDQLLITQFLLKYRSYGLIADAGYYYYRDLKQ
                     KGSLVSSSWKKPERYTPFLQKVYQTYLTDSKEIYGKVIPYVKYLIAYHAKLFFYKENT
                     YFREVLSESEQAIFVQELQKILQEVGASTIMELDTPLVVKEMMCSILQNGWPLQFETA
                     EKQDIPLVTVKENYRIGKTVAIELLLEEADIHDVKWVARTSFKEMPARLVKRKENQTI
                     WDVVVREKGTVEKAVFKLKPYQTKARLFYQDEEKDTPIADINIISSILGKLKRNRALK
                     RKFKQGGVS"
     gene            3033..4187
                     /locus_tag="U0308_002231"
     CDS             3033..4187
                     /locus_tag="U0308_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HEM2317192.1"
                     /translation="MKLVQKVYYLLFRLVGFLPRKKDLVIFESFSGKQYSCNPRAIYE
                     YMEEHNPEYELLWSVNPKFVAVFEAYGVPYVKRFSISWLFKMGLAKYWISNSRLPLEL
                     PKPKKTIYVQTWHGTPLKKLGVDIDEVHIPGQTTEQYKADFVKEAQKWDYLISPNAYS
                     SAIFRRAFGFTGEMIESGYPRNDILFSTDKELKIANIKKELNIPEEKKVVLYAPTWRD
                     NDFYEAGRYKFDLKIDIAKMQEKLGNEIVLLVRMHYLVAEHFDFTQYGDFVRDASNHE
                     DIRDLYLVSDLLITDYSSVFFDYANLQRPMLFYTYDLAEYRDTLRGFYFDFEKNAPGP
                     LVETNEELMSELEKMLENPPKIEDSFLEQFCTWEDGHAAEKTVKIVFAEK"
     gene            4200..5351
                     /locus_tag="U0308_002232"
     CDS             4200..5351
                     /locus_tag="U0308_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012581563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HEM2317193.1"
                     /translation="MKEVAIYIYMLAVKITGCLARIFPVKQKVVLLVSFPENSTAIIK
                     QMNEMKVTPKTVVFYDPRVDVTGFNFDFIQLKPKKIKHFISLMFHLNTAKVVITDNYF
                     VELAGLKERKNVTCIQIWHANGALKKFGWEDKAAQKRSARDKKRFQEVYRCFSKVLVG
                     SDEMAAIFQRSFLLEDSHMLKLGIPRTDNFFNQQQLKENAERTNTKLHLSNKKKLLYA
                     PTFRDEELHSTTLHLDIAKMKQALGNEYQLILKLHPSISNDLDEVVDDFVVYADKETP
                     IETILPAVDILITDYSSIPFEFALLEKPMIFFTYDLEEYDKARGLSDGFLATIPGPFV
                     HTTEELIQLIEQEAFDLEMVRAFAAKWNKYSDGHSSERFVSFLKEQLEK"
     gene            5416..5799
                     /gene="tagD"
                     /locus_tag="U0308_002233"
     CDS             5416..5799
                     /gene="tagD"
                     /locus_tag="U0308_002233"
                     /EC_number="2.7.7.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate cytidylyltransferase"
                     /protein_id="HEM2317194.1"
                     /translation="MKKVITYGTFDLIHWGHIRLLERAKALGDYLIVAISTDEFNRIK
                     HKEAYHNFEHRKLILEAIRYVDEVIPESNWEQKLEDVKNRDIDIFVMGDDWEGEFDFL
                     KPYCEVVYLPRTDGISTSKIKDDLK"
     gene            5917..7407
                     /locus_tag="U0308_002234"
     CDS             5917..7407
                     /locus_tag="U0308_002234"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEM2317195.1"
                     /translation="MTNLFQDDSLTLHTDLYQLNMMKAYFDDGLHERRSVFEVFFRDM
                     PFDSGFVVFAGLERIIHYMQNLRFTETDIAYLHDELGFEGPFLEYLRNFKFKGNILAA
                     KEGEFVFKTEPILQVEASLAEAQLIETALLNIVNFQTLIATKAARIRSVIDDETFAEF
                     GTRRAQEMDAAIWGTRAAYIGGCDSTSNVRAGKIFGIPVSGTMAHAMVQAYRDELEAF
                     RSYAKTHFDSIFLVDTYDTLKSGVPNAIKVAKEMGDKINFIGIRLDSGDMAFLSKKAR
                     QMLDEAGFTEAKIFASSDLDEHTILSLKAQKAKIDSWGVGTKLITAYDQPALGAVYKM
                     AAIADENDILQDSIKLSSNTEKVSTPGKKKVYRIITNEDGLKAEGDYIALADESLENV
                     DKLTMFHPVHTYIMKTVENFTARELLVPIFQNGELVYDMPSLDEIKAYKEENLALLWD
                     EYKRTVRPEQYPVDLSVKCWKNKMRNIEKVRKSVQLHSPVELDMPF"
     gene            7419..8243
                     /gene="nadE"
                     /locus_tag="U0308_002235"
     CDS             7419..8243
                     /gene="nadE"
                     /locus_tag="U0308_002235"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HEM2317196.1"
                     /translation="MEIRERILADMQVAETIDAHEEIRKSVEFLKAYLKKNTFLKSFV
                     LGISGGQDSTLTGKLAQMAISEMRAETGDDQYQFFAVSLPYGTQLDESDRQDALNFME
                     PDNRLTVNIKASVDASVAALAEAGVELSDFAKGNEKARERMKVQYAIAAMHKGVVVGT
                     DHSAEAVTGFYTKYGDGGTDINPLFRLNKRQGKALLKELGCPEHLYLKKPTADLEDNK
                     PALPDEVALGVTYDQIDDYLEGKEVPADAAAKIENWFIKTEHKRHMAITIFDDFWK"
     gene            8256..8564
                     /locus_tag="U0308_002236"
     CDS             8256..8564
                     /locus_tag="U0308_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEM2317197.1"
                     /translation="MKVGYGLLTAFYTHPGEKDNLVKILLEAAEGLDDYNTCIQYIVS
                     ESETEPDTVFVSEIWVDKGHHAASLDNPAVQETIARAKPMIKEIKQIQELDILGGKGI
                     "
     gene            8624..9028
                     /locus_tag="U0308_002237"
     CDS             8624..9028
                     /locus_tag="U0308_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2317198.1"
                     /translation="MKTLMIVCAGGATSSLMAQNVVKSATSEGMDAVLLFPDDVKYKD
                     SFREKYSERDLVVVMGPVGAITAGKFRDYKEQVDAVLVAPQVKYMYKTVEEVLGELSI
                     PCANIDSLDFGRMRGDKILTQGLALMDAKNSK"
     gene            9157..10713
                     /gene="guaA"
                     /locus_tag="U0308_002238"
     CDS             9157..10713
                     /gene="guaA"
                     /locus_tag="U0308_002238"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEM2317199.1"
                     /translation="MFKIMKDFTEQEKIIVLDFGSQYNQLITRRIREFGVYSELHPHT
                     ITVEEMKALNPTGIIFSGGPNSVYDEDAFRADERIFDMGIPILGICYGMQLMTTHFGG
                     KVERAKDREYGKADIHVEKPNRLFAGLPTDQVVWMSHGDLVVEEPAGFEVTITSKSCP
                     IAGIADEERSLYGVQFHPEVRHSVYGNELLKNFALNVCGCKGDWTMENFSEVEIAKIQ
                     EIVGDKKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGEADQVMATLQGE
                     FNMNIIKVDAKKRFMDKLAGVSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTLY
                     TDIIESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTELGMPDAIVW
                     RQPFPGPGLGIRVLGEITEEKLEIVRDSDYILREEIKNAGLEREIWQYFTALPNIRSV
                     GVMGDGRTYDHTVVVRAVTSIDGMTADWARIPWDVLEKISVRIVNEVDHVNRVVYDIT
                     SKPPATVEWE"
     gene            complement(10912..11391)
                     /locus_tag="U0308_002239"
     CDS             complement(10912..11391)
                     /locus_tag="U0308_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2317200.1"
                     /translation="MAIGDNIRKFRKLKGMTQKELGLALGFDKKTADIRIAQYESGTR
                     KPKEDMINDLSKIFDIRTDALTTPNIDSYVGLMHTLFSIEDTYGLKIIDGDDGISLKL
                     DKNSKSFHTLYDSFLSWQKEAEKFENEEITLEEYNHWRFNYPKVEAEKTKSKRDQSK"
BASE COUNT         3764 a         1811 c         2509 g         3417 t
ORIGIN      
        1 tgtagtcatt gaaggcggag aagaccgcaa tgaaacaatt atgaatggta ttcgttttgt
       61 ggaaaaaaca tatggcttaa cagatgatga tattatcgtg acgcatgatg ctgttcgtcc
      121 atttttaaca catcgtatta ttgaagaaaa tatagatgct gcacttgaaa caggagcagt
      181 agatactgtt attgaagcac ttgatacaat cgttgaatca agcaatcatg aggtgattac
      241 agatattccg gtcagagatc acatgtatca aggacaaaca ccgcaaagct tcaatatgaa
      301 aaaagtattc aatcactacc aaaatctaac accagagaaa aaacaaattc taacagatgc
      361 atgtaaaatt tgtttgcttg ctggcgatga tgtgaaatta gttaaaggtg aaattttcaa
      421 cattaagatt acgacgcctt atgatttgaa agtagcgaat gcgattattc aggagcggat
      481 agccaatgat taatcaagta tacagacttg tgtcagagag acagtttgaa gttgccaatg
      541 tggacgaatc attaacaggt gatgtggttg ttgttcgacc gactcattta tctatttgtg
      601 cggcagatca acgttactat acaggttcta gagggaaaga aatgttatct aaaaaacttc
      661 caatggcgct tattcatgaa ggtgttgggg aagttgttta tgatgcaacg aaagaattta
      721 aaccaggtac aaaagttgtc atgattccaa atacaccatt tgagaatgat ccagtcattg
      781 ctgagaacta tttacgttcg agtaaattcc gttctagtgg ttatgatggt ttaatgcagg
      841 attatgtgtt catgcgtcgt gatcgtgtgg tggcactgcc ggatgatatt aacatgaaag
      901 tagctgcttt ctcagaactg atttccgtgg cagttcacgc tattttacgc tttgaaggta
      961 aaagtaatgc taaccgggaa tctttcggtg tgtggggtga tgggaactta ggttttatca
     1021 cttctttact actaaaaaat tggtaccctg atagcaaagt ttacattttt gggaaaacac
     1081 catataaatt agacttcttt tcttttgtgg atggtgctta tgcaattgat gatgttccgg
     1141 ctgatttagt tattgatcaa gcattcgaat gtgctggagg aatgggtagt cagtatgcgg
     1201 tgagtcaaat tattgatgtc attaaaccag aaggaaccat ttccttactt ggtgtttcgg
     1261 agtatccgat tgaatttaat tcacgtatgg tacttgaaaa aggactaacc gtttatggaa
     1321 gtagtcgtag cggtcgtgtt gattttgaga aaacagtgga gttcttatca accaataaac
     1381 gtggggtaga atatctgcaa aatcttgttg gggaagttca tacagttcat tccattcaag
     1441 atgtaatcga agcgtttgaa gctgatttac gcagtccatg gggcaagagc gttatggagt
     1501 ggaagatata ataaaacatt ggggagttta ggctgtaagc taatgaattt gtttgctaaa
     1561 gtattttagg aagcaagaaa atcgaatgta agtattcgat ggtcatttgc taaatcctta
     1621 acttcccagc ttttatatgg agagggaaaa agaatgaaat ttgctattat aatgcctttt
     1681 tacaatgccg aaaaaaggtt agcactatcc atagatagta taattaagca gtcttacagc
     1741 tttttgaagc atgtggaagt actgcttatt aatgatggaa gcacggatgg aagtggcgct
     1801 atcgcaaatc gttacgctac aaaatatcct aacaatattc gcgtgttgac cgttccaaat
     1861 ggtggaccgg caaaagcgcg taatatcgga atacataatg taagtgaaga tactgatttt
     1921 gttggttttt tagacgccga tgatataatg tcagagaata tgttagcgag tatagttaca
     1981 tttctaaatg agtctaacgt ttctatgctt gtgccagctt tttattactt agatgatttt
     2041 ggaagtaaga aaaaaatttc accacataaa ttaaattacc gttttgcgaa tggaaatcga
     2101 gttgctgata ttgaaaaaga accggaagca attcattttt atattggcgg tactttttta
     2161 cgttatgatt gtttgaaaga atttactttt gatgagtcgc tttattttgc ggaggatcag
     2221 ttattaatta cccagttctt actgaaatat cggagctatg gcttgattgc ggatgcgggg
     2281 tattattact atcgtgatct aaagcaaaaa ggttctttag taagttcgtc ttggaaaaaa
     2341 ccagaacgat acacgccttt tttgcagaaa gtatatcaaa cctatttaac tgactcgaaa
     2401 gaaatatatg gcaaagtgat tccctatgtg aagtatctaa ttgcgtacca tgcaaaattg
     2461 tttttttata aagaaaatac ttatttccgg gaagttttaa gcgagtcgga gcaagcgatt
     2521 ttcgtgcaag aattacaaaa gattttgcag gaagtcggag caagtacgat tatggaatta
     2581 gacacacctc tcgtagtaaa agaaatgatg tgctcgattt tgcaaaatgg atggccgctg
     2641 caatttgaaa cggctgaaaa acaagatatt ccacttgtga cagtaaaaga aaattatcgt
     2701 atcggcaaaa cagtcgcgat tgaattactt ctagaagaag cggatattca tgacgtgaaa
     2761 tgggttgctc gcacgtcttt taaagaaatg ccagctcggt tagtcaaacg aaaagagaat
     2821 caaactattt gggatgtcgt tgtcagagaa aaaggcacag tagaaaaagc tgtatttaaa
     2881 ttaaaaccgt atcaaacgaa agcgcgtctt ttttatcaag atgaggaaaa ggatacgcct
     2941 atcgccgaca taaatatcat aagtagcatc ttagggaaat taaaacgaaa tcgagcgtta
     3001 aagcgaaagt ttaaacaggg gggagtatcc tgatgaagtt agtacaaaaa gtgtattatt
     3061 tgttgtttag attagtggga tttttaccgc gaaaaaaaga tttagtgata tttgaaagct
     3121 tttcaggtaa gcaatatagc tgtaatccac gggctattta tgaatatatg gaggagcata
     3181 atccggaata cgaattatta tggagtgtta atccaaaatt cgtggctgtt tttgaagctt
     3241 acggagttcc ttatgttaaa cgtttttcta ttagctggtt atttaaaatg gggcttgcta
     3301 agtattggat ttctaatagt agacttcctt tagaactacc aaaaccgaaa aaaacaatct
     3361 atgtgcaaac ttggcatgga acacccttaa aaaaattagg cgtggatatt gatgaagtgc
     3421 acattccagg gcaaacaacg gaacagtaca aagctgattt tgtaaaagaa gcacagaaat
     3481 gggactactt aatttctcct aatgcttatt ctagtgctat ttttagacgg gcatttggtt
     3541 ttactggaga gatgattgag tcgggatatc cgcggaatga tattttattt agtaccgata
     3601 aagagctgaa aatagctaat attaaaaaag agctaaatat cccagaagag aaaaaagttg
     3661 ttttatatgc gccaacatgg cgtgataatg atttttatga agctggaaga tataaatttg
     3721 atttaaaaat cgatatcgca aaaatgcaag aaaaattggg gaatgagatt gttttacttg
     3781 ttcgcatgca ttatttagtt gcggaacatt ttgatttcac gcaatatggt gattttgtcc
     3841 gcgatgcttc aaaccatgaa gatatacgcg atttatactt agtgagtgat ttgttgatta
     3901 ctgattattc ctctgtattt tttgattatg cgaatttaca gcgtcctatg cttttttata
     3961 cgtatgattt ggcggaatat cgtgatacgt tacgtggctt ttactttgat tttgaaaaaa
     4021 atgctcctgg tccgcttgtg gaaacgaatg aagaattaat gagtgaactt gaaaaaatgc
     4081 ttgaaaatcc acctaaaata gaagacagct ttttggagca gttttgtact tgggaagatg
     4141 gtcatgcagc agagaaaaca gtgaaaatcg tttttgctga aaaataggtg gtgggaattt
     4201 tgaaagaagt agcaatttat atttatatgc ttgctgttaa gataactggc tgtttggcga
     4261 ggatttttcc agttaaacaa aaagtggtac tgttagttag ctttccggaa aattccactg
     4321 caattataaa gcaaatgaac gaaatgaaag ttacgccaaa aacggttgtt ttctatgatc
     4381 caagagtgga tgtgaccggt tttaattttg attttatcca attaaagcca aaaaaaatca
     4441 agcactttat ctcgttaatg ttccatctga atacggcaaa agttgtcatt acggataatt
     4501 atttcgtgga attagctgga ttaaaagaac gtaaaaatgt gacgtgcatt caaatttggc
     4561 atgcgaatgg ggcattgaaa aaattcggct gggaagataa agcagcgcaa aaaagaagcg
     4621 cgcgcgataa aaaaagattt caagaagtgt acagatgttt ttcaaaagtg ctcgtcggat
     4681 cggatgaaat ggcagcaatt ttccaaaggt cgtttttact agaagattcg catatgttga
     4741 agctaggaat tccgagaacg gacaatttct tcaaccaaca acaattgaaa gaaaatgccg
     4801 aaaggacaaa taccaaatta catctttcca ataaaaagaa attattatat gcgccgacgt
     4861 tccgcgatga ggaacttcat agtactacgc ttcatttaga tatcgcgaag atgaaacaag
     4921 cactcggaaa tgagtaccaa ttaattttaa aattacatcc atctattagt aatgatttag
     4981 atgaagtagt ggatgatttt gttgtctatg cggataaaga aacgccaatc gagacgatac
     5041 taccagccgt agatatattg attactgatt attcatctat tccatttgaa tttgctttat
     5101 tagaaaaacc aatgatcttt ttcacgtatg atttagagga atatgataag gctagaggtt
     5161 tgtcggatgg ctttttagca acgattccgg ggccattcgt tcatacaaca gaggaactaa
     5221 tacaactaat tgagcaagaa gcattcgatt tagaaatggt tcgtgctttt gcggcgaaat
     5281 ggaataaata ttcagacggg cattctagtg agcgcttcgt ttcctttttg aaagaacagc
     5341 tagaaaagta gcactgctaa caagtagaga aatttttgtt ttcttgatat actactaaag
     5401 aaagtaggtg ggctgatgaa gaaagtaatt acatatggca catttgattt gattcactgg
     5461 gggcatattc gtttattaga acgagcaaaa gctttaggtg attaccttat tgtagccatt
     5521 tcaaccgatg aatttaatcg aatcaaacac aaagaagcat accataactt tgaacatcgc
     5581 aaattaattt tagaggcgat tagatatgtc gacgaagtga ttccggaaag taactgggaa
     5641 caaaaattag aagatgttaa aaatcgtgat attgatattt ttgtgatggg tgatgattgg
     5701 gaaggcgagt ttgacttctt aaaaccttat tgtgaagtcg tttatttacc acgaacagac
     5761 ggtatttcta cttctaagat taaagatgat ttaaaatagt cgtagcacaa aacaggcaga
     5821 ccagtaatgt tcaattatta ggtggtgggc ttgttttgtg ctattattat gtataaataa
     5881 taacgcaaag aactagttat gataggagca gaagaaatga caaatttatt tcaagatgat
     5941 agtctaacgc tgcatacaga cttatatcaa ctaaatatga tgaaagcgta ttttgacgat
     6001 ggacttcatg agcgtagatc ggtatttgaa gtgtttttcc gagatatgcc atttgattcg
     6061 ggttttgttg tgtttgcggg gctagaacga attattcatt atatgcaaaa tttacgtttt
     6121 acagaaacgg atattgctta tttacacgac gaacttggtt ttgaaggacc ttttctagaa
     6181 tatttacgta attttaaatt taaaggaaat attcttgctg cgaaagaagg ggaatttgtt
     6241 tttaaaacag agccaatcct tcaagtagaa gcaagcttgg cggaagcaca attaattgaa
     6301 acagctttgc ttaatattgt gaatttccaa acgctgattg caacaaaagc ggcgcgaatc
     6361 cgttctgtta ttgatgacga aacgtttgca gaattcggta caagacgtgc acaagaaatg
     6421 gatgcggcta tttggggcac acgagcggct tacatcggcg gttgtgattc gacgagtaat
     6481 gttcgcgctg gaaaaatttt cggtattcct gtgtctggta cgatggcaca tgcgatggtt
     6541 caagcttatc gcgacgaact agaagcattt agaagttacg caaaaacgca ttttgattcg
     6601 attttcttag tagatacata cgatacgcta aaatctggcg taccaaatgc gattaaagtg
     6661 gcgaaagaaa tgggcgataa aattaacttt atcggcattc gtttagatag cggggatatg
     6721 gctttcttat ctaaaaaagc acgccaaatg ttagatgagg ctggttttac agaagcaaaa
     6781 atctttgctt cgagtgactt agacgaacat actattttat cgttaaaagc gcaaaaagca
     6841 aaaatcgatt cttggggcgt tggcacaaaa ctaatcaccg cttacgacca accagcatta
     6901 ggtgccgttt acaaaatggc ggcaattgct gatgaaaatg atattttaca agattcgatt
     6961 aaactttcga gtaacaccga aaaagtgtcg actcctggta aaaagaaagt ttaccggatt
     7021 attacgaatg aagatggctt gaaagcggaa ggcgattata ttgctttagc ggacgaatca
     7081 ctcgaaaatg tggataaact aacgatgttc cacccagttc atacgtatat tatgaaaaca
     7141 gtcgagaact tcaccgcgcg tgagctactt gtaccgattt tccaaaacgg agaacttgta
     7201 tatgatatgc cttcactaga tgaaattaaa gcatataaag aagagaactt ggcgctactt
     7261 tgggacgagt acaaacgaac agttcgtccg gagcaatacc cagttgattt aagtgtaaaa
     7321 tgttggaaaa ataagatgcg taatatcgaa aaggtacgta aaagtgtcca gcttcattca
     7381 ccagttgaac tagatatgcc gttttaggag gaattataat ggaaatcaga gaaagaattt
     7441 tagcagatat gcaagtggca gaaacgattg atgcacacga agaaatccga aaaagtgtcg
     7501 agtttttaaa agcatattta aaaaagaata cgttcttaaa aagctttgtt cttgggattt
     7561 ctgggggaca agattcgact ttaacaggaa aactagcaca gatggcgata agcgaaatgc
     7621 gagcagaaac gggtgacgat cagtaccaat tcttcgctgt gagcttgcca tacggaacgc
     7681 aactagatga atcggaccgt caagatgcac tgaactttat ggaaccagat aatcgtttaa
     7741 ccgtaaatat taaagcttca gtggatgcga gtgttgcggc gcttgcggaa gcgggagtgg
     7801 aactatctga tttcgctaaa ggtaacgaaa aagcgcgcga acggatgaaa gtacaatacg
     7861 caattgcagc gatgcataaa ggcgtagtag ttggaaccga tcactccgca gaagcagtta
     7921 ctggctttta tacgaaatac ggcgacggtg gaacggatat taatccacta tttcgcttga
     7981 ataaaagaca aggcaaggcg cttcttaaag agcttggctg cccagaacat ctatatttga
     8041 aaaaaccgac agcagattta gaagataata aaccggcact tcctgatgag gtcgcgcttg
     8101 gtgtgactta tgaccaaatt gacgattact tggaaggtaa ggaagttcca gcagatgctg
     8161 cagcaaaaat tgagaactgg tttattaaaa ccgaacataa acgccatatg gcaattacta
     8221 tatttgacga tttctggaaa taggaggctg tttaaatgaa agttggttat ggtttattaa
     8281 ctgcatttta tacacatcca ggagaaaaag ataatttagt gaaaattttg cttgaagcgg
     8341 ctgaaggatt ggatgattac aacacgtgta ttcagtatat tgtcagcgaa tctgaaaccg
     8401 agccagacac ggtgtttgtt tctgaaattt gggtcgacaa agggcatcat gcagcatcac
     8461 ttgataaccc agctgtacaa gaaaccattg cacgcgcaaa accgatgata aaagaaataa
     8521 aacaaataca agaattagac atactcggtg gaaaaggcat ataattttaa caacaagaat
     8581 gattctgggg ctctcctgga atcatttttt ggagggatga gaaatgaaaa cgttgatgat
     8641 tgtttgtgct ggtggtgcga cgtcgagttt aatggcgcaa aatgtcgtga aaagcgcgac
     8701 gtcagaagga atggacgctg ttctactatt tccagatgat gtgaaatata aagatagttt
     8761 tcgtgaaaaa tacagcgagc gggatttggt tgtcgtgatg ggaccagtcg gcgcaattac
     8821 agctgggaaa ttccgtgatt ataaagaaca ggttgacgcg gttttagtag caccacaagt
     8881 gaaatatatg tacaaaacag tggaggaagt attaggcgaa ctaagtattc cttgcgctaa
     8941 tattgattca ctcgatttcg gtcggatgcg tggagataag attctcacgc aaggtctagc
     9001 cttaatggat gcgaaaaatt ccaaataagg tgttgcaact ttagagggga aacgttaaaa
     9061 tgaaagaaga tgaaaaggac aagtgatttg tccttttctt atattattgt gaagtaaccg
     9121 cgattttgcg gtttcatttt atagataagg gtggttttgt ttaaaattat gaaagacttt
     9181 accgagcaag agaaaattat cgttctagat tttggtagtc agtacaatca actaattacg
     9241 cgccgcattc gtgagttcgg tgtgtatagt gaattacatc cgcatactat tacagttgaa
     9301 gaaatgaaag cactaaatcc aacggggatt attttttcag gaggacctaa cagtgtgtat
     9361 gacgaagatg ccttccgcgc tgacgaaaga atctttgaca tgggaattcc gattttggga
     9421 atttgttacg gcatgcaatt aatgacaacg cacttcggtg gcaaagtaga acgtgcgaaa
     9481 gaccgcgaat acgggaaagc ggacattcac gttgagaagc caaaccgttt atttgctgga
     9541 ctaccaaccg atcaagttgt ttggatgagt cacggcgatt tagtcgttga ggagcctgct
     9601 ggttttgaag taacaattac tagtaaatct tgcccaattg caggtattgc ggacgaagaa
     9661 cgttcacttt acggcgtgca attccaccca gaagtacgtc actctgttta cggcaacgaa
     9721 ttactgaaga attttgcatt aaatgtttgt ggctgtaaag gcgactggac aatggagaac
     9781 tttagtgaag tagaaatcgc taaaatccaa gaaatcgtag gcgacaaaaa agtcttgctt
     9841 gccctttctg gcggcgtaga ttcctctgtt gttggtgtgt taattcataa agcaatcggc
     9901 gaccaactaa cttgtatttt cgtagaccat ggccttcttc gcaaagggga agctgaccaa
     9961 gtaatggcaa cattacaagg cgaattcaac atgaacatca tcaaagtaga tgcgaaaaaa
    10021 cgcttcatgg acaaacttgc tggcgtttct gacccagagc aaaaacgtaa aatcatcggt
    10081 aacgaattca tttacgtatt cgacgatgaa gctaacaaac tagacggcgt agaattccta
    10141 gctcaaggaa cactttacac agacatcatc gaaagtggta cagcaactgc ccaaacaatc
    10201 aagtctcacc acaatgtagg cggcttacca gaagatatgc aatttaaact aatcgaacca
    10261 ttaaatacac ttttcaaaga tgaagttcgc gcactaggaa cagaacttgg catgcctgac
    10321 gcaatcgttt ggcgccaacc attcccaggc ccaggcttag gaatccgcgt tcttggcgaa
    10381 attacggaag agaaattaga gattgtccgc gattctgatt acatcttgcg tgaagaaatc
    10441 aaaaacgcag gtctagaacg cgaaatctgg caatacttta ctgctcttcc aaatatccgt
    10501 agcgttggtg ttatgggtga tggcagaacg tatgaccata ctgtggttgt tcgtgcggtg
    10561 acgagtattg atggtatgac agccgattgg gcacgtattc cgtgggatgt actggagaaa
    10621 atttcggtac ggattgtgaa tgaagtggat cacgtgaatc gtgttgttta tgatattacg
    10681 agtaaaccac cagctacggt tgagtgggaa tagtaaacaa agccctaaaa cctcagtaat
    10741 gatgaggttt tagggctttt tctatgtcga gtgataacag tttgataaca gtttatatta
    10801 tcgtagtaat tttacggata atattctatc aaattttagt aatatcattc attaaaataa
    10861 ttttctatat gaaaggcttt gtcgaaaatt gacgagcttt tttttgcgtt tttatttcga
    10921 ctgatctcgt tttgattttg ttttttctgc ttctactttt ggataattaa atcgccagtg
    10981 attgtattct tccaaagtta tttcttcatt ctcaaatttc tcagcttctt tttgccaaga
    11041 aagaaaagaa tcatacagag tgtggaatga ttttgaattt ttatcaagct ttaaagaaat
    11101 gccatcatca ccatctataa tctttaaacc ataagtatcc tcaattgaaa ataaggtatg
    11161 cataagaccg acatagctat caatatttgg tgtagtaaga gcatcggtac gaatatcaaa
    11221 aatttttgat aaatcattaa tcatatcttc ttttggtttt cttgttccac tttcatattg
    11281 tgcaatacga atatcagctg tttttttatc aaagcctaga gctaaaccta attctttttg
    11341 agtcatacct ttgagcttac gaaactttct tatgttatct ccaattgcca tgttaccact
    11401 cctaaacata tttgttaagt tgattataaa acaaatagaa agcaaaatca attaaactaa
    11461 acttatttgt ttaacataaa tattatacta aacatttttg t
//
LOCUS       DASDYK010000092        11314 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.092, whole genome shotgun sequence.
ACCESSION   DASDYK010000092 DASDYK010000000
VERSION     DASDYK010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11314
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.092"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            281..1975
                     /gene="ilvD"
                     /locus_tag="U0308_002240"
     CDS             281..1975
                     /gene="ilvD"
                     /locus_tag="U0308_002240"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEM2317201.1"
                     /translation="MRSDKIKKGVEQAPARSLLHATGQIKSPGDMDKPFIAICNSYID
                     IVPGHVHLRELADVAKEAIREAGGIPFEFNTIGVDDGIAMGHIGMRYSLPSREVIADA
                     AETVINAHWFDGVFYIPNCDKITPGMLLASVRTNVPAIFCSGGPMKAGLSAHGKALTL
                     SSVFEAVGAFKDGSMSQEDFLDMEANACPTCGSCAGMFTANSMNCLMEILGMAVPGNG
                     TTLAVSDARRDLIRESAFHLMDLVKKDIRPRDIITKDAIDDAFALDMAMGGSTNTVLH
                     TLALANEAGIEDYDLERINDIAKRVPYLSKIAPSSSYSMHDVHEAGGVSAIVKELVDL
                     GGAIHPDRITVTGKTIRENVADAKINNTDVIHPKENPYSPVGGLSMLFGNIAPKGAAI
                     KVGGVDPSVQVFKGEAICFSSHDEAVEAIDNHTVREGHVVVIRYEGPKGGPGMPEMLA
                     PTSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAAAGGPIALVHDGDIITIDLP
                     NRTLNVDVSDEVLEERRKELPKFKAKVKTGYLARYTALVTSAHTGGILQIPEDLID"
     gene            1993..3714
                     /gene="ilvB"
                     /locus_tag="U0308_002241"
     CDS             1993..3714
                     /gene="ilvB"
                     /locus_tag="U0308_002241"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HEM2317202.1"
                     /translation="MIDTTKTNEKATKKQNKSGAELLIDSLKKQQVEMIFGYPGGAVL
                     PLYDAFYDCDIPHILTRHEQGAIHAAEGYARVTGKPGVVVVTSGPGATNVLTGIADAM
                     SDSIPLVIFTGQVHTPGIGKDAFQEADMIGLTIPITKYNYQVRDVRDLPKIVNEAFHI
                     ASTGRKGPVVVDIPKDMGIIQTESVRPDTIDLPGYQPTYSPNPLQLEKLMQSLSAASK
                     PLILAGAGVNHARATAELLEFAERYQIPIVNTLLGLGSFPQSHDLFLGMGGMHGSYAA
                     NMALTDCDLLINFGSRFDDRLASAPKEFATKATIAHIDIDPAEIGKIIETQIPIVADI
                     NETLTQLLQMELPVHPDTSHWYKLNMTRKNRHPFNFDRTKKAEIKPQRVIELIGEITQ
                     GEALVSTDVGQHQMWAAQFYPFQFDHQIITSGGLGTMGFGFPAAVGAQLAFPDKTVVA
                     IVGDGGFQMTNQELAILNDYQINVKTVIINNGSLGMVRQWQEKFHGERYSHSIFTSQP
                     DFVKLAEAYGVKGVRLTNPETLEKDLRKAFAHPGPIVIDVHVAKDELVLPMVPSGKPN
                     HQMEGVE"
     gene            3715..4206
                     /gene="ilvN"
                     /locus_tag="U0308_002242"
     CDS             3715..4206
                     /gene="ilvN"
                     /locus_tag="U0308_002242"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEM2317203.1"
                     /translation="MRRIITATVNNSSGVLNRITGVISRRQYNIDSISVGWTEIPNVS
                     RITIVVHVDSLYEIEQVTKQLNKQIDVLKVSDITDDAHIERELALLKINSPAALRSEL
                     NAVIEPFRATVIDVGTKNVVIQVTGTSEKIDAFVDTVRPYGIKQMARTGVTGFTRSPK
                     KMG"
     gene            4305..5300
                     /gene="ilvC"
                     /locus_tag="U0308_002243"
     CDS             4305..5300
                     /gene="ilvC"
                     /locus_tag="U0308_002243"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEM2317204.1"
                     /translation="MTKVYYEDAVKNNALEGKTVAVIGYGSQGHAHSQNLRDNGNNVI
                     IGIREGKSAESARNDGFDVYSVSEAAEKADVIMILLPDETQGETYENEIKPNLKAGNA
                     LVFAHGFNIHFDVINPPNDVDVFLVAPKGPGHLVRRTFVEGGAVPSLFAIYQDATGNA
                     RDTALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGATHLIQAGFETLVEAGY
                     QPELAYFEVLHEMKLIVDLMYEGGMEKMRHSISNTAEYGDYVSGPRVVTADTKKAMKE
                     VLTDIQNGNFAKSFIDDNKNGFKEFHRMRKEQQGHQIEKVGAELREMMPFVKPQH"
     gene            5458..6996
                     /locus_tag="U0308_002244"
     CDS             5458..6996
                     /locus_tag="U0308_002244"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEM2317205.1"
                     /translation="MKKIQFFDTTLRDGEQTPGVNFDVKEKIQIALQLEKLGIDVIEA
                     GFPISSPGDFECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFLATS
                     DVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDA
                     GATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIE
                     NGARRVEGTINGIGERAGNTALEEVAVALHIRKDFYQAETNIVLNQFKNSSDLISRLS
                     GMPVPRNKAVIGGNAYAHESGIHQDGVLKNPDTYEIITPALVGVDKNSLPLGKLSGKH
                     AFNTRMEEMGYTLTEQEQKDAFKRFKQLADAKKEVTEEDLHALILGQSSESADDFELK
                     HLQVQYVTGGVQGAIVRIEERDGALVEDAATGSGSIEAIYNTINRLMKQDIELTDYRI
                     QAITAGQDAQAEVHVVIKNDKGAVFHGIGIDFDVLTASAKAYLQASGKSKTASKQADF
                     EEVK"
     gene            6998..8050
                     /gene="leuB"
                     /locus_tag="U0308_002245"
     CDS             6998..8050
                     /gene="leuB"
                     /locus_tag="U0308_002245"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEM2317206.1"
                     /translation="MTYKITSLAGDGIGPEIMTSGLQVLEAVAKKYNHTFEIESHPFG
                     GAGIDVAQDPIPSSTLKACRDADAILLGAIGGPKWDNAPKRPEDGLLALRKALGLFAN
                     IRPIQVPSSITHLSPLKKEIVENTDFVVVRELTGGLYFGEPKYWDNEAAVDSLTYTRA
                     EIERIIEKAFEIAATRNKKVTSVDKANVLASSKLWRKIADEVASRHPDITLEHLYVDA
                     AAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGS
                     APDIANQNIANPMSMISSVSMMLRQSFSLFEEADATDAATARTMQAGFLTADLGGNTS
                     TTDFTNEVLKQIEGGE"
     gene            8052..9440
                     /gene="leuC"
                     /locus_tag="U0308_002246"
     CDS             8052..9440
                     /gene="leuC"
                     /locus_tag="U0308_002246"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEM2317207.1"
                     /translation="MGKTLFDKLWNRHVIYGKEGEPQLLYVDLHLIHEVTSPQAFEGL
                     RMENRPLRRPDKTFATMDHNVPTEDIFNIQDLVAKKQIEALQTNCEEFGVTLADMGSD
                     RQGIVHMVGPETGLTQPGKVIVCGDSHTATHGAFGAIGFGIGSSEVEHVFATQTIWQQ
                     KPKSMGIEINGNLPKGVYAKDIILHLIATYGVAFGTGYAVEYYGETIRNMSMEERMTI
                     CNMAIEGGAKMGMMAPDETTFEYVRGREYAPADMDKAISDWKTLQTDPDAEYDLHIKM
                     DASILEPYVTWGTNPEMGVPFSKAFPEIKDMNYERAYEYMGLKPGQTAEEIELGYVFI
                     GSCTNARLSDLEEAARIVKGNKVKNNIRALVVPGSRQVRNAAESIGLDKIFIEAGFEW
                     REPGCSMCLGMNPDQVPDGVHCASTSNRNFEGRQGKGARTHLVSPAMAAAAAINGHFI
                     DIRKEAVISGGN"
     gene            9427..10008
                     /gene="leuD"
                     /locus_tag="U0308_002247"
     CDS             9427..10008
                     /gene="leuD"
                     /locus_tag="U0308_002247"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEM2317208.1"
                     /translation="MEEIKVHIGKTVALMNDNIDTDQIIPKSFLKRIERTGFGEFLFD
                     SWRYLPNRKPNPDFPLNAPDRQEATILITGDNFGCGSSREHAAWALLDYRFRVIIAGS
                     YSDIFYMNCTKNGVLPIVLPREAREKLAKIAADENVTIDLPNQQVISSVGTYPFEIDA
                     TWKNKFINGLDDIAITFEHIDAIKAYEQKVDSI"
     gene            10027..11295
                     /gene="ilvA"
                     /locus_tag="U0308_002248"
     CDS             10027..11295
                     /gene="ilvA"
                     /locus_tag="U0308_002248"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HEM2317209.1"
                     /translation="MELVDLLVTEEDVEKAYEVLKAVVKHTPLEYDFYLSEKYHCNVY
                     LKREDLQRVRSFKLRGAFYAISRLSAEQLEKGVVCASAGNHAQGVAYTCKRMTVPATI
                     FMPTTTPQQKVSQVKFFGGSNVEVVLVGDTFDASATAAKEFAATHGQTFIPPFDDPDI
                     IAGQGSLAVEMVKDLNKAHEQADYVFAGIGGGGLISGVATYLKAKSPITKIIGVEPDG
                     APSMTAALKQNQVVTLDKIDKFVDGAAVKEVGGLTFQHAKVLVDEVTTVSEGAVCSTI
                     LDMYTKQAIVAEPAGALSVAALEIYREEIKDKTVVCIVSGGNNDINRMQEIEERSLLH
                     EGLKHYFIVNFSQRPGALKEFVNDVLGPHDDITKFEYTKKVNRGNGPVIIGVLLQDKN
                     DYEGLLERVAAFDPSYIPINDNQTLYTLLV"
BASE COUNT         3453 a         2244 c         2507 g         3110 t
ORIGIN      
        1 tcagtcatta caattttatt actctagaag gactttgagc actgtagaaa tttacagtag
       61 tttgagtcct gtttacgtta aatgggattc tagcaaagca tcccattgtt ttcatcattg
      121 gggtgctttt tctttagcta gatttcgagt tttcaagcat cgagaagcca ttatcaagca
      181 agcagctact taatcatata tattaatgcc acgctattta gtgaattcta aaaattcagt
      241 gtcggcaaat aattcttaat tagaaatggg gtaaagtcat atgcgtagtg acaaaataaa
      301 aaaaggtgtc gaacaagctc cagcaagaag tttgctgcat gctacaggtc aaattaaaag
      361 tccaggtgat atggataaac catttatcgc tatttgtaac tcttacattg atatcgttcc
      421 tggtcatgtt catttgcgag aattagcgga tgtggctaaa gaagctatta gagaagctgg
      481 cggtatccca tttgaattta atacgattgg tgtagatgac ggcattgcga tgggacatat
      541 cggtatgcgc tattcccttc cctctcgtga agttatcgcg gatgcagcgg aaacggtaat
      601 caatgcgcac tggtttgatg gggttttcta catcccaaac tgtgacaaaa tcacgcctgg
      661 aatgcttctc gcttctgttc gtacaaatgt acctgctatc ttctgttctg gtggcccaat
      721 gaaagctgga ttatctgcac acggaaaagc actcactctc tcttctgttt ttgaagcggt
      781 tggcgcattt aaagatggca gcatgtcgca ggaagatttt cttgatatgg aagctaatgc
      841 gtgtccgact tgcggatctt gcgcaggaat gtttacagca aactcaatga attgtttgat
      901 ggaaatccta ggtatggctg ttccgggaaa tggtacaaca cttgctgttt ctgacgcacg
      961 ccgtgatctt attagagaat ctgcttttca tttaatggat ttagttaaaa aagatattcg
     1021 tcctcgtgac attattacaa aagatgcgat tgacgatgct tttgcgctag atatggcaat
     1081 gggtggttcg acaaataccg tattacatac acttgcactt gcaaacgaag ctggtattga
     1141 agattatgat ttggaacgta tcaatgatat tgctaaacgt gttccctacc tttccaaaat
     1201 tgcaccttcc tcttcttact caatgcatga tgttcacgaa gctggcggtg tttcagccat
     1261 tgttaaagaa ctggttgatc taggtggcgc aatacatcca gacagaatca ctgttactgg
     1321 taaaacgatt cgcgaaaacg tagctgatgc aaaaattaat aataccgatg ttattcatcc
     1381 aaaagaaaat ccgtacagcc cagttggcgg actttcgatg ttgtttggta acatcgcacc
     1441 aaaaggagct gctatcaaag ttggtggcgt agatccttcc gtacaagttt tcaaaggaga
     1501 agcgatttgc tttagttctc atgatgaggc ggtggaagca attgataacc ataccgtccg
     1561 cgaggggcat gtcgtggtca ttcgctacga aggtcctaaa ggcggtccgg gaatgcctga
     1621 aatgcttgcg ccaacatcta gtattgttgg tcgaggttta ggaaaagatg ttgctttgat
     1681 tacagatggt cgcttttctg gggctactcg tggtatcgca gttggccaca tttctccaga
     1741 agctgcagct ggtggtccta tcgcccttgt tcatgacggc gatatcatca cgattgattt
     1801 gccaaaccgg acgttaaacg tggatgtttc tgatgaggtt ttggaagaac gaagaaaaga
     1861 attaccgaaa tttaaagcta aagtaaaaac tggttacctt gcaagatata ctgcgcttgt
     1921 aactagcgcc cacactggtg gcattttgca aattccagaa gatttaatcg actaaaaaat
     1981 gaggtgataa gcgtgattga tacgacgaag acaaatgaaa aagcgacaaa aaagcaaaat
     2041 aaaagtggtg cggaactttt aattgactcc ttgaaaaagc aacaagtcga gatgattttt
     2101 ggctatccgg gtggtgcggt tctccctctc tacgatgctt tttacgactg tgatattccg
     2161 catattctaa caagacacga gcaaggagcg attcatgctg cggaaggtta tgcacgtgtt
     2221 actgggaaac ccggtgtggt agttgtaaca agtggacctg gggcgacaaa tgtattaact
     2281 ggtattgcgg atgcaatgag tgattcgatt ccattagtga ttttcaccgg acaagttcat
     2341 acgcctggta tcggaaaaga tgccttccaa gaagccgata tgattgggct aaccattcca
     2401 attactaaat ataattacca agtgcgtgat gttcgtgact taccaaaaat tgtcaatgaa
     2461 gcttttcata ttgcaagtac tggtcgtaaa ggtcctgttg tcgtggatat tccaaaagac
     2521 atggggatta tccaaacaga gtctgtacga ccagatacga tagatctgcc gggttatcaa
     2581 ccgacttatt caccaaaccc acttcaactg gaaaaactaa tgcaatctct ttctgccgca
     2641 agcaagccac taatacttgc cggagctggc gtcaatcatg cgagagctac agctgaatta
     2701 ctagaattcg ctgaacgcta tcaaattcca atcgtgaata cgctgcttgg tctaggaagt
     2761 ttcccgcaaa gtcatgattt gttccttggt atgggcggca tgcacggttc atacgcggca
     2821 aacatggcac ttacagattg cgatttgctc attaattttg gttcccgctt cgatgacagg
     2881 cttgccagtg cgccaaaaga atttgccaca aaagcaacga ttgcacatat cgatattgat
     2941 cctgctgaaa ttggcaaaat tatcgaaaca caaattccga ttgtagctga tattaacgaa
     3001 acacttacac aactactaca aatggaactt ccggttcatc ctgatacatc ccattggtac
     3061 aaattaaata tgacccgtaa aaaccgtcat ccttttaatt ttgatagaac gaaaaaagca
     3121 gaaattaaac cacagcgtgt gattgagcta attggtgaaa ttacgcaagg tgaagcgctt
     3181 gtttctaccg atgttggcca gcatcaaatg tgggcggcac agttttatcc attccaattt
     3241 gatcatcaaa ttattacgag tggcgggctt ggcacaatgg gctttggctt tccagcagct
     3301 gttggtgcgc aacttgcttt cccagataaa acggtagtcg ccattgttgg ggacggtggt
     3361 ttccaaatga ccaatcaaga actagcgatt ttaaatgatt accaaatcaa tgtgaaaacg
     3421 gtcattatca ataacggttc gctcggcatg gttcgtcagt ggcaagaaaa attccacggc
     3481 gaaagatatt ctcattcgat tttcacgagc caaccagatt ttgttaaact agctgaagct
     3541 tacggtgtca aaggggttcg cttgacgaat cctgaaacgc tagaaaaaga tctaagaaaa
     3601 gccttcgctc accctggacc gattgtcatt gacgttcatg tggccaaaga tgagctagta
     3661 cttccaatgg ttccaagcgg caaaccaaat caccaaatgg aaggagtgga ataaatgcgc
     3721 cgaatcatta ccgctacagt aaacaactct tctggcgtgt taaatcgtat cactggggtt
     3781 atctccagac gccaatacaa tattgatagc atctctgtcg gctggaccga aatcccaaat
     3841 gtttctcgga ttaccatcgt cgtccatgtc gattccttat acgaaatcga gcaagtaact
     3901 aaacaactca ataaacaaat cgatgtgctc aaagtgagcg atattactga cgatgcgcac
     3961 atcgaacgcg aactagcttt acttaaaatc aactcccctg ctgccttacg atctgagcta
     4021 aacgcagtca tcgaaccatt tcgcgccact gtcattgatg tcggcacgaa aaatgtcgtc
     4081 attcaagtaa ctggaacaag tgaaaaaatc gatgctttcg ttgacacagt tcgaccgtat
     4141 ggtattaagc aaatggcgag gaccggcgtc acaggcttta caagaagccc taaaaaaatg
     4201 ggttaaaaat catttactac agagcagtct cttgctttgc tagcatcaga acagcacatc
     4261 gctattctga aatataaaaa gaaattagtt ggaggttagg aaaaatgaca aaagtttatt
     4321 atgaagatgc agtaaaaaac aacgcactag aaggtaaaac agtagcagta atcgggtacg
     4381 gttcgcaagg tcacgcacat tctcaaaatc tacgtgacaa tggcaataac gttattatcg
     4441 gcattcgcga aggaaaatct gccgaatctg ctagaaacga tggctttgat gtttattctg
     4501 ttagcgaagc cgctgaaaaa gcagacgtta tcatgattct tttgccagat gaaacgcaag
     4561 gtgaaacata cgaaaacgaa attaaaccta acctaaaagc tggcaatgcg cttgttttcg
     4621 cacatggttt caacattcat tttgacgtaa ttaatcctcc aaacgatgtg gatgttttcc
     4681 tagtagctcc aaaaggtcct ggtcacttag ttcgccgtac atttgttgaa ggtggcgcgg
     4741 ttccttccct attcgctatc tatcaagatg ccactggaaa cgcacgcgac acagcccttt
     4801 cctatgcaaa aggtattggc gcaactcgtg ctggcgttat cgaaaccact ttcaaagaag
     4861 aaaccgaaac cgatctattt ggcgaacaag cagttctttg tgggggtgca actcacctta
     4921 tccaagctgg ttttgaaaca cttgtagagg ctggctacca accagaactt gcttattttg
     4981 aagtattaca cgaaatgaaa ctaattgttg atttgatgta tgaaggcggc atggaaaaaa
     5041 tgcgccactc aatctccaat acagctgaat atggtgatta tgtttccggt cctcgtgttg
     5101 ttacagctga tacgaaaaaa gcaatgaaag aagtacttac cgacattcaa aatggtaact
     5161 ttgctaaatc attcattgac gacaataaaa atggttttaa agaattccat agaatgcgca
     5221 aagaacaaca aggtcatcaa atcgaaaaag ttggtgctga acttcgtgaa atgatgccgt
     5281 ttgttaaacc acaacattaa tacttaattc ggattgctag gtgagatttc ttgcctagca
     5341 accgttatcc tttttcaata tgagtttaag gaagaacctt tttctttcct aaactgatac
     5401 tgaaagcagg aaaaatccaa gcttccctat ctaatataaa acaagaggtg aaatcgaatg
     5461 aagaaaatcc agttttttga tactacactt agagatggcg aacaaacccc tggagttaat
     5521 tttgacgtaa aggagaaaat ccagattgcc ttacaactcg aaaaacttgg aattgatgtg
     5581 attgaagccg gctttccgat ttcttctcct ggagattttg aatgcgttaa ggcgattgca
     5641 aaagcgatta aacattgttc tgtaacaggg ctagcgcgct gtgttgaagg agatattgac
     5701 cgtgccgagg aagcgctaaa agacgctgtt tctccgcaaa tacatatctt ccttgcaacg
     5761 agcgatgtgc atatggaata caaattaaaa atgagtcggg cggaagttct tgcttccatt
     5821 aaacaccaca ttagttatgc gagacaaaaa tttgatgttg tacagttttc accagaagat
     5881 gcaactcggt cagatcgtgc ttttctgatt gaagcagttc aaacagcgat tgatgcagga
     5941 gcaactgtca tcaacattcc agatacggtc ggatatacaa accccaccga atttgggcaa
     6001 ttattccaag atttgcgccg cgaaataaag caatttgatg atattatttt cgcttctcat
     6061 tgccatgatg accttggtat ggcgacagca aacgcacttg ctgcaatcga aaatggcgca
     6121 agacgcgtcg aaggtacgat taatgggatt ggtgagcgtg ctgggaatac ggcactggaa
     6181 gaagttgcgg tagcgcttca tattcgcaaa gatttttatc aagctgaaac aaacattgta
     6241 ttgaatcaat ttaaaaattc aagtgatttg attagccgct tgtctggtat gcctgttcca
     6301 cgtaacaaag ctgtaattgg tggcaatgct tacgcgcatg aatctggtat tcatcaagat
     6361 ggtgtcctaa aaaatcctga tacgtatgaa atcatcaccc ctgctcttgt cggcgtggat
     6421 aaaaactctc ttccacttgg caaactttct ggcaaacatg ccttcaatac gcgcatggaa
     6481 gaaatgggct acacactaac cgaacaagaa caaaaagatg cctttaaacg tttcaaacaa
     6541 ttagcagatg cgaaaaaaga agtaacagaa gaagacttgc acgcgttaat tctcggacaa
     6601 tcttccgaat cagccgatga tttcgaacta aaacatttgc aagttcaata tgttactggc
     6661 ggcgtccaag gtgcgattgt tcgcattgaa gaacgtgatg gcgctctagt agaagacgca
     6721 gcaactggtt caggtagcat tgaagcgatt tataatacga ttaaccgtct tatgaaacaa
     6781 gatattgaat taaccgatta tcgtatccaa gcaattacag ccggtcaaga tgcccaagca
     6841 gaagtccatg tcgtcattaa aaatgacaaa ggcgctgtgt tccatggtat cggtattgat
     6901 tttgacgttt taactgctag tgctaaagct tatttgcaag catcaggcaa aagcaaaacc
     6961 gccagtaagc aagctgattt cgaggaggta aaataacgtg acctataaaa ttacttcctt
     7021 agctggcgac ggaattggtc cagaaattat gacttctgga cttcaagtat tagaggcagt
     7081 cgcaaaaaaa tacaaccata cgtttgaaat tgaatctcat ccctttggcg gcgcaggaat
     7141 tgacgtagca caagacccaa tcccttcttc caccttaaaa gcgtgccgag acgccgacgc
     7201 cattttactc ggagcaattg gtggtccaaa atgggataat gcgccgaaac gtcccgaaga
     7261 tggcctactt gcacttcgaa aagcgcttgg tcttttcgcc aacattcgac ctatccaagt
     7321 cccaagctcc atcacgcacc tttctccttt aaaaaaggaa attgttgaga acactgattt
     7381 tgtcgttgtt cgtgaattga ctggtggact ttatttcgga gaaccgaaat attgggataa
     7441 tgaggcagca gtggattcat taacatatac ccgtgcagaa atcgagcgaa ttatcgagaa
     7501 agctttcgaa atcgccgcta ctaggaataa aaaagttact tcagtagata aagcgaatgt
     7561 gcttgcttct agtaaattat ggcgaaaaat cgctgatgaa gtcgcaagtc gtcacccaga
     7621 tatcacacta gaacatctat acgtcgacgc tgccgcaatg cttatgattc agcgaccaac
     7681 gacctttgat gttatcgtga cagaaaactt atttggcgat attttaagtg atgaagcgtc
     7741 tgttattact ggctcgcttg gaatgctccc ttctgctagc cacgcggaaa acggaccatc
     7801 tttatacgaa ccaattcacg gatctgcgcc agatatcgct aaccaaaata tcgcgaatcc
     7861 aatgtcgatg atatcctctg tatccatgat gcttcgtcaa tctttctctc tttttgaaga
     7921 agcagatgcg actgatgcag ctacagcaag aacgatgcaa gctggatttt taactgctga
     7981 cctcggaggc aatacttcca caactgattt tacaaatgaa gttctaaaac aaattgaagg
     8041 aggagaataa aatggggaaa acactttttg ataaactttg gaatcgccat gtcatttatg
     8101 gcaaagaagg tgaaccgcaa ttattatacg ttgaccttca tttgattcat gaagttactt
     8161 ctcctcaagc gtttgaagga cttagaatgg aaaatcggcc actgcgtaga ccagataaaa
     8221 cgttcgcgac aatggatcat aacgttccaa ctgaagatat tttcaacatt caagaccttg
     8281 ttgctaaaaa acaaatcgaa gcactgcaaa ccaattgcga ggaatttggc gtgacgctag
     8341 ctgatatggg tagtgatcgc caaggaatcg tgcatatggt tggaccagaa actgggctaa
     8401 cacaacctgg aaaagtcatt gtatgtggag attcgcatac tgcaactcat ggagcatttg
     8461 gagcaattgg ctttgggatt ggttctagtg aagtagagca tgtttttgcg actcaaacca
     8521 tttggcaaca aaagccaaaa tcaatgggca tagaaattaa cggcaatctt ccaaaaggtg
     8581 tctatgcaaa agatattatt ttgcatctga ttgccacgta tggcgtcgct tttggaactg
     8641 gctatgccgt tgagtattac ggcgaaacta ttcgcaatat gtcgatggaa gaacggatga
     8701 cgatttgtaa tatggcaatt gaaggtggcg caaagatggg catgatggcg ccagatgaaa
     8761 ctacttttga atatgtgcgc ggtcgtgaat acgctcccgc tgatatggat aaagcaatta
     8821 gtgactggaa aacgctccaa acagatccag atgccgaata tgaccttcat atcaaaatgg
     8881 atgcgagcat tttggaaccg tatgtcactt ggggaacgaa tcccgaaatg ggagtgccat
     8941 tttctaaagc atttccggaa attaaagata tgaactatga gcgtgcttat gaatatatgg
     9001 ggctaaaacc tggtcaaact gcagaagaaa tcgagcttgg ctatgtgttt attggttctt
     9061 gtacaaatgc cagactttct gacttagaag aagctgctcg tatcgtcaaa ggaaataaag
     9121 tgaaaaataa tattcgcgca ctcgtggtcc ctggttctcg ccaagtgcgt aatgcggcag
     9181 aatctatcgg actagataaa atttttatag aagctggctt tgagtggcgt gaacctggtt
     9241 gttcgatgtg tctaggaatg aaccctgatc aagtaccaga cggcgttcac tgtgcttcta
     9301 cttcgaaccg aaattttgaa ggtcgtcaag gtaaaggcgc tcgtactcat cttgtttcac
     9361 cagcaatggc tgctgctgcg gcaattaacg ggcactttat cgatattcga aaggaggcgg
     9421 ttatcagtgg aggaaattaa agtacacatt ggaaaaacag tagcgctaat gaatgacaat
     9481 attgataccg accaaatcat tccaaaaagt ttcttaaaac gcattgagcg aacaggcttt
     9541 ggcgaatttc tctttgatag ttggcgctac ctgccgaacc gtaaaccaaa cccagacttc
     9601 ccgctcaatg ctccagatcg tcaggaagcg actattttaa ttacgggaga taactttggt
     9661 tgcgggtcct ccagagaaca tgctgcgtgg gcactactag actaccgttt ccgtgtaatt
     9721 atcgctggca gttatagtga tatattttat atgaattgta caaaaaacgg cgtgctccct
     9781 atcgttcttc ctagagaggc gcgtgaaaaa ttagcgaaaa ttgcagccga tgaaaatgtg
     9841 accattgact tgccaaatca acaagttatc agttcagttg gtacctaccc gtttgagatt
     9901 gatgctactt ggaaaaataa atttattaat ggactggatg atatcgccat tacatttgaa
     9961 catattgatg cgattaaagc ctatgaacaa aaagtggatt caatataaga aaaggtagtg
    10021 aggatgatgg aattagttga tttattagta acagaagaag atgtcgaaaa ggcctatgaa
    10081 gtcttaaagg cggtcgtcaa acatacgcca ctagaatatg atttttatct ttcggaaaaa
    10141 tatcattgca atgtctatct gaaacgcgaa gatttgcaaa gagtgcgttc ttttaaatta
    10201 cgtggtgctt tttatgctat ttctagatta tcagcggaac aattggaaaa aggtgtggta
    10261 tgtgcaagtg cgggaaacca tgcgcaagga gttgcatata cgtgcaaacg aatgaccgtc
    10321 ccagctacga tttttatgcc aacgactacg ccgcaacaaa aagtatcaca agtaaaattt
    10381 ttcggtggta gtaatgtcga agtggtttta gttggcgata cgtttgatgc ttctgcaact
    10441 gccgcgaaag aatttgctgc aacgcatggc caaactttca tccctccgtt tgatgatcct
    10501 gatattatcg ctggccaagg ctctcttgct gtggagatgg tgaaagattt aaataaagca
    10561 catgagcaag cagattatgt ttttgcagga atcggtggtg gtggcttaat tagcggtgtt
    10621 gcaacgtatc tcaaagcaaa gagcccgatt acaaaaatca tcggggtaga acctgatggc
    10681 gcgccttcaa tgacagcagc tttaaaacaa aatcaagtcg taacactaga taaaatcgat
    10741 aaatttgttg atggcgctgc ggtaaaagaa gttggtggct taacgttcca acatgcgaaa
    10801 gtattagttg atgaagtgac aaccgtctct gagggagctg tttgttctac gattttggat
    10861 atgtatacga agcaagcaat tgttgcagaa cctgctggag cactatccgt tgccgcactt
    10921 gaaatttacc gtgaagagat taaagacaag accgttgtct gtattgtaag tggcggaaac
    10981 aacgacatca accggatgca agaaattgaa gagcgttccc tcttacacga aggattaaaa
    11041 cattatttta tcgtcaattt ctcgcagcgt cctggggctt tgaaagaatt tgttaacgat
    11101 gtgctcggtc cacatgacga tatcaccaaa ttcgaatata cgaaaaaagt gaatcgaggt
    11161 aatgggcctg taattatcgg tgttttgttg caagataaaa atgattatga aggattgctt
    11221 gagcgggttg ctgcttttga cccgagctat attccgatta atgataatca aaccctatac
    11281 acattacttg tataaaaaga gttctcgtat gatg
//
LOCUS       DASDYK010000093        10963 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.093, whole genome shotgun sequence.
ACCESSION   DASDYK010000093 DASDYK010000000
VERSION     DASDYK010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10963
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.093"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(137..1090)
                     /gene="plcA"
                     /locus_tag="U0308_002249"
     CDS             complement(137..1090)
                     /gene="plcA"
                     /locus_tag="U0308_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylinositol-specific phospholipase C"
                     /protein_id="HEM2317210.1"
                     /translation="MYKNYLQRTLVLVLCFILCFFTFPLGGKAYSLNNWNKPIKNSVT
                     TKQWMSALPDTTSLAALSIPGTHDTMSYNGDMTWTLTKPLAQTQTMSLYQQLEAGIRY
                     IDIRAKDNLKIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYR
                     IQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSHKFGMQFG
                     ASNQVIQDDYNGPSVKTKFKEIVQTAYQASKADNKLFLNHISATSLTFTPRQYAAALN
                     NKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN"
     gene            1333..2922
                     /gene="hly"
                     /locus_tag="U0308_002250"
     CDS             1333..2922
                     /gene="hly"
                     /locus_tag="U0308_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cholesterol-dependent cytolysin listeriolysin O"
                     /protein_id="HEM2317211.1"
                     /translation="MKKIMLVFITLILVSLPIAQQTEAKDASAFHKENLISSMAPPAS
                     PPASPKTPIEKKHADEIDKYIQGLDYNKNNVLVYHGDAVTNVPPRKGYKDGNEYIVVE
                     KKKKSINQNNADIQVVNAISSLTYPGALVKANSELVENQPDVLPVKRDSLTLSIDLPG
                     MTNQDNKIVVKNATKSNVNNAVNTLVERWNEKYAQAYPNVSAKIDYDDEMAYSESQLI
                     AKFGTAFKAVNNSLNVNFGAISEGKMQEEVISFKQIYYNVNVNEPTRPSRFFGKAVTK
                     EQLQALGVNAENPPAYISSVAYGRQVYLKLSTNSHSTKVKAAFDAAVSGKSVSGDVEL
                     TNIIKNSSFKAVIYGGSAKDEVQIIDGNLGDLRDILKKGATFNRETPGVPIAYTTNFL
                     KDNELAVIKNNSEYIETTSKAYTDGKINIDHSGGYVAQFNISWDEINYDPEGNEIVQH
                     KNWSENNKSKLAHFTSSIYLPGNARNINVYAKECTGLAWEWWRTVIDDRNLPLVKNRN
                     ISIWGTTLYPKYSNSVDNPIE"
     gene            3257..4789
                     /gene="mpl"
                     /locus_tag="U0308_002251"
     CDS             3257..4789
                     /gene="mpl"
                     /locus_tag="U0308_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloproteinase Mpl"
                     /protein_id="HEM2317212.1"
                     /translation="MKSKLICIIMVIAFQAHFNMAVKADSVGEERLRNNIQAKRNPAD
                     LKALPDSCEAKDFYKNFKILDMTKDKLGVTHYTLALSSDGYLTDNDEIKVHVTPDNKI
                     AFINGDLQQGQLRITNQIKITEKNAIEKAFEAIGQSEAHVKSYIGNPVKEKEIIINSR
                     TKRLVYNIKLIFAEPEVASWIIQVDAETGAILKKQNMLSEVERADTHKDFQALGKGAN
                     RLLQRPLHVMKINDLFYLVDRTHKGLIRTFDLNHKTDASFGKVVSNKTNMFTDPEFSS
                     AVDAHFYASEVYDYYKNVHQLESLDGKGGEIDSFVHYGLNCNNAFWDGREILYGDGDK
                     KNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIAPNHWLIGE
                     DVCVRGLRDGRIRSIKDPDKYNQAAHMKDYESLPITEEGDWGGVHFNSGIPNKAAYNT
                     ITKLGKEKTEQLYFRALKYYLTKKAQFTDAKKALQQAAKDLYGEDASKKVAEAWEAVG
                     VN"
     gene            4989..6908
                     /gene="actA"
                     /locus_tag="U0308_002252"
     CDS             4989..6908
                     /gene="actA"
                     /locus_tag="U0308_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="actin assembly-inducing protein ActA"
                     /protein_id="HEM2317213.1"
                     /translation="MGLNRFMRAMMVVFITANCITINPDIIFAATDSEDSSLNTDEWE
                     EEKTEEQPSEVNTGPRYETAREVSSRDIEELEKSNKVKNTNKADLIAMLKAKAEKGPN
                     INNNNSEQSENVAINEEASGSDRPAIQVERRHPGLPSDSAAEIKKRRKAIASSDSELE
                     SLTYPDKPTKATKKKVAKASVTDTSESDLDSSMQSADESTPQPLKANQQPFFPKVFKK
                     IKDAGKWVRDKIDENPEVKKAIVDKSAGLIDQLLTKKKNEEVNASDFPPPPTDEELRL
                     ALPETPMLLGFNAPATSEPSSFEFPPPPTDEELRLALPETPMLLGFNAPATSEPSSFE
                     FPPPPTEDELEIMRETAPSLDSSFTSGDLASLRSAINRHSQNFSDFPPMPTEEELNGR
                     GGIPTSEEFSSLNSGDFTDDENSETTEEEIDRLTDLRDRGTGKHSRNAGFLPLNPFTS
                     SPVPSLTPKVSKISAPALITDVTKKAPFKNPPQPLNVFNKKTTTKTAPKKITPVNTAP
                     KLAALPITKAQETELGENKAPFIEKQAETNNRPIDMPSLPVIQKEVTERNKEEMKPQT
                     EEKVVGESEPANNVNGKKRSAGIEEGKLIAKSAEDEKAKEEPVNHTTLILAMLAIGVF
                     SLGAVIKIIQLRKNS"
     gene            6944..7813
                     /gene="plcB"
                     /locus_tag="U0308_002253"
     CDS             6944..7813
                     /gene="plcB"
                     /locus_tag="U0308_002253"
                     /EC_number="3.1.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylcholine phospholipase C"
                     /protein_id="HEM2317214.1"
                     /translation="MKFKKVVLGMCLTASVLVFPVTIKASACCDEYLKPPAAPHDIDS
                     KLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVDHMRANLMNELKNFDKQIAQGI
                     YDADHKNPYYDTSTFLSHFYNPDKDNTYLPGFANAKITGAKYFNQSVADYREGKFDTA
                     FYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVVKRF
                     CSNDVKEWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTL
                     AGFLEFWSKKTNE"
     gene            7885..8208
                     /locus_tag="U0308_002254"
     CDS             7885..8208
                     /locus_tag="U0308_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463737.1"
                     /note="This small protein, a possible lipoprotein, is
                     found in Listeria monocytogenes; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5502 family protein"
                     /protein_id="HEM2317215.1"
                     /translation="MYIKGRLIFFFVMFVIALCSVLILLIIKMSVWKEEPFNLSDAKE
                     IECLGSCKIKNTNQKIHFFSIKKNLFEEKGNMAGILNEHERKGADKSIFIVILDDEKG
                     IANEE"
     gene            8341..8802
                     /locus_tag="U0308_002255"
     CDS             8341..8802
                     /locus_tag="U0308_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehR family lipoprotein"
                     /protein_id="HEM2317216.1"
                     /translation="MKMLKKGTTVLFVMIMAVMLVACGDKEETKTYSLSQNGVDSKLT
                     YTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGLKEKIEYKDDKA
                     IETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGYKEVSK"
     gene            complement(8855..9187)
                     /locus_tag="U0308_002256"
     CDS             complement(8855..9187)
                     /locus_tag="U0308_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative heavy metal-binding protein"
                     /protein_id="HEM2317217.1"
                     /translation="MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFG
                     GRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTA
                     VVIEAQDY"
     gene            complement(9254..9973)
                     /locus_tag="U0308_002257"
     CDS             complement(9254..9973)
                     /locus_tag="U0308_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HEM2317218.1"
                     /translation="MLFLLYLIYSRGVTRTITFDQLNTELQALENPNTIKIFRNHGCP
                     DSLDLYGLKIGDLKKIIRREKLTKNHELAVELIESNNSDLIYLGLLAINPDKITTEQI
                     EKWNIIFRETWSQLTFGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINNL
                     PEAEALLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLG
                     NTACKVPDAISYIEKARNRTK"
     gene            complement(10006..10947)
                     /locus_tag="U0308_002258"
     CDS             complement(10006..10947)
                     /locus_tag="U0308_002258"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HEM2317219.1"
                     /translation="MKDHQKIILVGDGAVGSSYAFACVNLSIGQEFGIIDIDKDRTIG
                     DAMDLSHAVPFSTPKKIYSANYSDCHDADLVVVTAGTAQKPGETRLDLVNRNIKIMKG
                     IVDEVMASGFDGIFLIASNPVDILTYATWKFSGLPKERVIGSGTSLDTARFRMSIADY
                     LKVDARNVHGYILGEHGDTEFPAWSHTTVGGLPITEWISEDEQGAMDTIFVSVRDAAY
                     EIINKKGATFYGVAAALARITKAILNNENAILPLSVYLDGHYGMNDIYIGAPAVVNRQ
                     GVRHIVEMNLNDKEKEQMKNSADTLKKVLDDAMKQID"
BASE COUNT         3749 a         1877 c         2169 g         3168 t
ORIGIN      
        1 ttttgatttc gcaaaagaaa tgcatacata tttaaaaacg gatttattta gatgttaaaa
       61 ttgaaatagg gttagtatat ggttccgatg gttgctcgga gatatactaa cccttttttt
      121 gtaggaataa tatatgttag ttgaatttat tgttttttat gatgtttttg attgtttgtt
      181 tttcggggaa gtccatgatt agaatgccta atcctcgaac tttttccgat gttaagttga
      241 gtacgaactg ctctactttg ttgtttaatg ctgcagcata ctgacgaggt gtgaatgtta
      301 atgaagtggc actaatatgg ttaagaaaca gtttgttgtc cgctttagaa gcttgataag
      361 cagtctggac aatctctttg aattttgttt tcacactcgg accattgtag tcatcttgaa
      421 ttacttggtt ggatgcgccg aactgcatgc cgaatttgtg tgaattaatg actaatggct
      481 tttttgtgtg gttctctgaa agtaataata tttttccgcg gacatctttt aatgtaggga
      541 ttttattgct cgtgtcagtt ctgggagtag tgtaaaaata atctttgtaa atgttgatta
      601 atggttggat ccgataatca aaactatcgt tgctgttttg ctcgtctttt aaacgcataa
      661 taatggtttc ttttggattt ttctttaaaa attgagtaat cgtttctaat acacctgaaa
      721 gtgatgcatt taaaaaaatt ggcccatggt aaattttgag attgtctttt gctctaatat
      781 cgatgtaccg tattcctgct tctagttgtt ggtacaatga catcgtttgt gtttgagcca
      841 gtggtttggt taatgtccac gtcatgtctc cgttatagct catcgtatca tgtgtacctg
      901 gtatagagag tgctgctagg ctcgttgtgt caggtagagc ggacatccat tgctttgtag
      961 ttacagagtt ctttattggc ttattccagt tattaagcga atatgctttt ccacctaatg
     1021 ggaaagtaaa aaagcataaa ataaaacaga gtactaaaac taatgtgcgt tgcaaataat
     1081 tcttatacaa aatggccccc tcctttgatt agtatattcc tatcttaaag ttacttttat
     1141 gtcgaggcat taacatttgt taacgacgat aaagggacag cgggactaga ataaagctat
     1201 aaagcaagca tataatattg cgtttcatct ttagaagcga atttcgccaa tattataatt
     1261 atcaaaagag aggaggggct aaacagtatt tggcattatt aggttaaaaa atgtagaagg
     1321 agagtgaaac ccatgaaaaa aataatgcta gtttttatta cacttatatt agttagtcta
     1381 ccaattgcgc aacaaactga agcaaaggat gcatctgcat tccataaaga aaatttaatt
     1441 tcatccatgg caccaccagc atctccgcct gcaagtccta agacgccaat cgaaaagaaa
     1501 cacgcggatg aaatcgataa gtatatacaa ggattggatt acaataaaaa caatgtatta
     1561 gtataccacg gagatgcagt gacaaatgtg ccgccaagaa aaggttataa agatggaaat
     1621 gaatatatcg ttgtggagaa aaagaagaaa tccatcaatc aaaataatgc agatatccaa
     1681 gttgtgaatg caatttcgag cctaacatat ccaggtgctc tcgtgaaagc gaattcggaa
     1741 ttagtagaaa atcaacccga tgttcttcct gtcaaacgtg attcattaac acttagcatt
     1801 gatttgccag gaatgactaa tcaagacaat aaaattgttg taaaaaatgc tactaaatcg
     1861 aacgttaaca acgcagtaaa tacattagtg gaaagatgga atgaaaaata tgctcaagct
     1921 tatccaaatg taagtgcaaa aattgattat gatgacgaaa tggcttacag tgaatcacaa
     1981 ttaattgcaa aatttggtac ggcatttaaa gctgtaaata atagcttgaa tgtaaacttc
     2041 ggcgcaatca gtgaagggaa aatgcaagaa gaagtcatta gttttaaaca aatttactat
     2101 aacgtgaatg ttaatgaacc tacaagacct tccagatttt tcggcaaagc tgttactaaa
     2161 gagcagttgc aagcgcttgg agtgaatgca gaaaatcctc ctgcatatat ctcaagtgtg
     2221 gcatatggcc gtcaagttta tttgaaatta tcaactaatt cccatagtac caaagtaaaa
     2281 gctgcttttg acgctgccgt aagtgggaaa tctgtctcag gtgatgtaga actgacaaat
     2341 atcatcaaaa attcttcctt caaagccgta atttacggtg gctccgcaaa agatgaagtt
     2401 caaatcatcg acggtaacct cggagactta cgagatattt tgaaaaaagg tgctactttt
     2461 aaccgggaaa caccaggagt tcccattgcc tatacaacaa acttcttaaa agacaatgaa
     2521 ttagctgtta ttaaaaacaa ctcagaatat attgaaacaa cttcaaaagc ttatacagat
     2581 ggaaaaatca acatcgatca ctctggagga tacgttgctc aattcaacat ctcttgggat
     2641 gaaataaatt atgatcctga aggtaacgaa attgttcaac ataaaaactg gagcgaaaac
     2701 aataaaagta agctagctca tttcacatcg tccatctatt tgccaggtaa cgcaagaaat
     2761 attaatgttt acgctaaaga atgcactggt ttagcttggg aatggtggag aacggtaatt
     2821 gatgaccgga acctaccgct tgtgaaaaat agaaatatct ccatctgggg cactacactt
     2881 tatccgaaat atagtaatag tgtagataat ccaatcgaat aattttaaaa attaataaaa
     2941 aaattaagaa taaaaccgct taacacacac acgaaaaata agcttgtttt gcacttttca
     3001 taaattattt tatgaagaat gtagaaacag gcttattttt ttaatttttc tagaagaatt
     3061 aacaaatgta aaagaatgtc tgattgtttt tccatataat ataagcatat cccatagttt
     3121 aagccaccta tagtttctac tgcaaaacgt ataatttagt tcccacatat gctaaaaaac
     3181 gtgtccttaa ctctctctgt cagattagtt gtaggtggct taaacttact tttacgaatt
     3241 gaaaaggagc ggtgaaatga agagtaaact tatttgtatc atcatggtaa tagcttttca
     3301 ggctcatttc aatatggcgg taaaagcgga ttctgtcggg gaagaaaggc tccgaaataa
     3361 tatacaagcc aaaaggaacc ctgctgattt aaaagctttg ccagattcct gcgaagcaaa
     3421 agatttttat aaaaatttta aaattcttga tatgacaaaa gataagctag gcgttacgca
     3481 ttatacgctc gcgctaagtt ctgatggtta cttgactgat aatgatgaaa taaaggtcca
     3541 cgtcacaccg gataataaaa tcgcttttat aaatggagat ttacagcaag ggcagcttag
     3601 gattactaat caaataaaaa ttacagaaaa aaatgctatt gaaaaagcat ttgaagccat
     3661 tggtcagagt gaagctcatg tgaaaagtta tattggaaat ccagtgaaag aaaaagaaat
     3721 catcatcaat tccagaacga aacgcttagt ttataatata aaattgattt ttgctgagcc
     3781 ggaagttgcg agttggatta ttcaagtgga tgcagaaacc ggcgcaattt taaaaaaaca
     3841 aaatatgctt tccgaggtag agcgggctga tacccacaaa gattttcaag cgcttggtaa
     3901 aggagctaac cgattactcc agagaccatt acatgtcatg aaaataaatg acctgtttta
     3961 cttagtggat agaactcata aaggactcat aagaactttt gatttaaacc ataaaacgga
     4021 cgcatctttt ggaaaagtgg tgtcgaataa aacgaatatg tttacggatc cggaatttag
     4081 ttccgcggtg gatgctcatt tttacgcaag tgaagtgtac gattactata aaaatgtcca
     4141 tcaactagag agtctagatg gtaaaggtgg agaaattgat tcgtttgttc attatggctt
     4201 gaattgcaat aatgcttttt gggatggccg agaaattctt tatggagatg gggacaaaaa
     4261 gaatttcaaa ccattttcat gcgccaaaac gattgttggt catgaactaa cgcatgcggt
     4321 tatccagtat tcggcaggat tagaatacga agggcaatca ggtgcgctaa acgaatcgtt
     4381 cgccgatgtc tttggttatt ttattgcgcc aaatcattgg ttgattggtg aggatgtctg
     4441 tgtgcgtggg ttacgagatg ggcgaataag aagcatcaaa gatcctgaca aatataatca
     4501 agcggctcat atgaaggatt atgaatcgct tccaatcaca gaggaaggcg actggggcgg
     4561 agttcatttt aatagtggta taccgaataa agcagcctac aatacgatca ctaaacttgg
     4621 aaaagaaaaa acagaacagc tttacttccg cgccttaaag tactatttaa caaaaaaagc
     4681 ccagtttacc gatgcgaaaa aagcactcca acaagcggcg aaagatttat atggtgaaga
     4741 tgcttctaaa aaagttgcgg aagcttggga agcggtcgga gttaactgat taacaaatgt
     4801 tagagaaaac ttaattcttc aagtgatatt cttaaaataa ttcatgaata tttttttctt
     4861 aaattagcta attaagaaga taaccaactg ctaatccaat ttttaacgga ataaattagt
     4921 gaaaatgaag gccagatttt ccttgttcta aaaaggttgt attagcgtat cacgaggagg
     4981 gagtataagt gggattaaat agatttatgc gtgcgatgat ggtagttttc attaccgcca
     5041 actgcattac gattaacccc gacataatat ttgcagcgac agatagcgaa gattccagtc
     5101 tgaacacaga tgaatgggaa gaagaaaaaa cagaagagca gccaagcgag gtaaatacgg
     5161 gaccaagata cgaaactgca cgtgaagtaa gttcacgtga tattgaggaa ctagaaaaat
     5221 cgaataaagt gaaaaatacg aacaaagcag acctaatagc aatgttgaaa gcaaaagcag
     5281 aaaaaggtcc aaatattaat aataacaaca gtgaacaaag cgagaatgtg gctataaatg
     5341 aagaagcttc aggatccgac cgaccagcta tacaagtgga gcgtcgtcat ccagggttgc
     5401 catcggatag cgccgcggaa attaaaaaaa gaaggaaagc tatagcatca tcggatagtg
     5461 agcttgaaag ccttacttat ccggataaac caacaaaagc aactaagaaa aaagtggcga
     5521 aagcgtcagt tacggatact tctgaaagtg acttagattc tagcatgcag tcagcggatg
     5581 agtctacacc acaaccttta aaagcaaatc aacaaccatt tttccctaaa gtatttaaaa
     5641 aaataaaaga tgcgggtaaa tgggtacgtg ataaaatcga cgaaaatccc gaagtgaaga
     5701 aagcaattgt tgataaaagt gcagggttaa ttgaccaatt attaactaag aagaaaaatg
     5761 aagaggtaaa tgcttcggac tttccaccac cgcctacgga tgaagagtta agacttgctt
     5821 tgccagagac accgatgctt cttggtttta atgctcctgc tacatcagaa ccgagctcat
     5881 tcgaatttcc accaccacct acggatgaag agttaagact tgctttgcca gagacgccaa
     5941 tgcttcttgg ttttaatgct cctgctacat cggaaccgag ctcattcgaa tttccaccgc
     6001 ctccaacaga agatgaacta gaaattatgc gggaaacagc accttcgcta gattctagtt
     6061 ttacaagcgg ggatttagct agtttgagaa gtgctattaa tcgccatagc caaaatttct
     6121 ctgattttcc accaatgcca acagaagaag agttgaacgg gagaggtggt ataccaacat
     6181 ctgaagaatt tagttcgctg aatagtggcg attttacaga tgacgaaaac agcgagacaa
     6241 cagaagaaga aattgatcgc ctaactgatt taagagatag aggaacagga aaacactcaa
     6301 gaaatgcggg ttttttacca ttaaatccgt ttactagcag cccggttcct tcgttaactc
     6361 caaaggtatc gaaaataagc gcgccggctc tgataactga cgtaactaaa aaagcaccat
     6421 ttaaaaatcc gccacagcca ttaaatgtgt ttaacaaaaa aactacaacg aaaacagcac
     6481 caaaaaaaat aacccctgtg aataccgcgc caaagctagc agcacttcct atcacgaaag
     6541 cgcaagaaac tgagcttggg gaaaataaag caccatttat agaaaaacaa gcagagacaa
     6601 acaatcggcc aattgatatg ccgagcctac cagtaatcca aaaagaagtt acagaaagaa
     6661 ataaagagga aatgaaaccg caaaccgagg aaaaagtggt aggagaaagc gaaccagcta
     6721 ataatgtgaa cggaaaaaaa cgttctgctg gcattgaaga aggaaaatta attgctaaaa
     6781 gtgcagaaga cgaaaaagca aaagaagaac cagtgaacca tacgacgtta attcttgcca
     6841 tgttagctat tggcgtgttc tctttaggag cggttatcaa aatcattcaa ttaagaaaaa
     6901 atagttgaag acgcagaatg aaagaaaaag tgaggtgagt gatgtgaagt tcaaaaaagt
     6961 ggttctaggt atgtgcttga ccgcaagtgt tctagtcttt cctgtaacga taaaagcaag
     7021 tgcctgttgt gatgaatatc taaagccccc cgcagctccg catgatattg acagcaaatt
     7081 accgcataaa cttagttggt ccgcggataa tccgacaaat actgacgtaa atacgcacta
     7141 ttggcttttt aaacaagcag aaaaaatact agctaaagat gtagatcata tgcgagctaa
     7201 tttaatgaat gaacttaaaa atttcgacaa acaaattgct caaggaatat atgacgcgga
     7261 tcataaaaat ccatattatg atactagtac gtttttatct catttttata atcctgataa
     7321 agataatact tatttgccag gttttgctaa tgcgaaaata acaggagcca agtattttaa
     7381 tcaatcggtg gctgattacc gagaagggaa atttgacaca gcattttata aattgggcct
     7441 agcaatccat tattatacgg atattagtca acctatgcac gccaataatt ttaccgcaat
     7501 atcctatcca ccaggctacc actgtgcata tgaaaattac gtagatacca ttaaacacaa
     7561 ttatcaagca acagaagaca tggtagtgaa aagattttgc tcaaatgacg tgaaagaatg
     7621 gctctatgaa aatgcgaaaa gggcgaaagc ggactatccg aaaatagtca atgcgaaaac
     7681 taaaaaatca tacttagtag gaaattccga atggaaaaag gatacagtgg aacctactgg
     7741 agctagacta agagattcac agcaaacttt ggcaggcttt ttagaatttt ggtctaaaaa
     7801 aacaaatgaa taacaatatt taggaatata ttcttatcca ctcgttagcg ggtggatata
     7861 ttttatgggg aggaagtaag ccgaatgtat ataaaaggga ggttaatctt tttctttgta
     7921 atgtttgtaa tcgcgttatg ttccgtatta atattgctga taataaaaat gagcgtatgg
     7981 aaagaggaac catttaattt aagtgatgca aaggagattg agtgtcttgg aagttgcaaa
     8041 ataaaaaata ctaatcaaaa aatccatttc ttctccataa aaaagaattt gtttgaggaa
     8101 aagggcaata tggctggaat tttgaatgaa cacgagcgaa aaggagctga taagtccatt
     8161 ttcattgtaa ttttagatga tgaaaaaggg attgcaaacg aagagtaaag ttatgattag
     8221 ttgtgacttt ttcgtgtcaa tcaaaaaagt gttgtgagca aatgttcaca aaatatctat
     8281 tgtaatagtg cagtttgtta ggtacccttg aatagaaaaa acaatgtagg aggaacatct
     8341 atgaaaatgc ttaaaaaggg tacaacggtt ttatttgtaa tgattatggc ggttatgtta
     8401 gtcgcgtgtg gggacaaaga agaaacgaaa acttactcac tttcccaaaa tggtgttgat
     8461 tctaaattaa catacacata taagggagac aaagttacta aacaaacagc tgagaacaca
     8521 atgtcatatg cttcgctagg tgttgcttca aaagaagacg ctgaaaaaat gcttaaagca
     8581 acaagcgata aattccaagg tattgatggt ttaaaagaaa agattgaata taaagatgat
     8641 aaagctattg aaacactaga agtagattac actaaaatct cttcggaaga tatgaacaaa
     8701 atccctggta tgtcttcaaa cggtgatact tctaaaggga ttagcatgga ggaatctgca
     8761 aaaatgctag aatcccaagg ctataaagaa gtttcaaaat aaatttgcaa taaaacaaga
     8821 agtatccgat tcatttggat acttcttgtt ttattcaata atcttgcgct tcgatgacaa
     8881 cagctgtacc agatgcagtg accataagca ttccgttatc agctccaagc acttcataat
     8941 caatgtcaac accgataacg gcatttgcgc caatatcttt cgcacgttgt tccatttcgc
     9001 gaattgcttc ctcgcgagca ttaataagtt catcttcata gccttgcgaa cggcccccga
     9061 agaaatttcg aagtccagct ccaatatctt tcatgaagtt aacgccggtg atgacttcgc
     9121 cgaaaacgat ttttttatat tcgataattt gtttaccttc aatatttggt gaggttgtta
     9181 caatcatgag ttatccctcc agtttttctt ttatcatacc tcttactact ttttctagtc
     9241 aaaggatatc cggttatttc gtacgatttc tcgctttttc tatataagaa atagcatccg
     9301 gaactttaca cgctgtattt ccaaggttta catgaacttt cccgactgat ttcgcagctt
     9361 ccattgcttt ttcgtgcaaa tcgtctttgt aaattccaca agtgataata aaaccgttca
     9421 ttgaatagcg ggttctattg gtttctgttt gcagcgtttc tttcgcgcgt tgaagtaatg
     9481 cctctgcttc aggcaaattg ttaatatgtt cgctataaat ctgccagccc atggatttag
     9541 ttaaatcata atcactttca atccacgttt tggcgaaaag gagtgcatca tcacgtttgc
     9601 ttacaatcga tgctagtcca aaagttagtt gtgaccatgt ttcgcgaaaa atgatattcc
     9661 atttttcgat ttgttccgtg gttattttgt cgggattaat cgctagcaaa ccgagataaa
     9721 tcaagtcact attatttgat tcaatcagct ctacggcgag ttcgtgattt tttgtcagtt
     9781 tttctcggcg aataattttc tttaaatcac caatttttag tccgtaaaga tctaatgaat
     9841 ccggacagcc gtgattacga aaaattttaa tcgtattggg gttttctaag gcttgtagct
     9901 cggtattaag ttggtcaaaa gtaatcgtac gcgtcactcc tctcgaataa attaagtata
     9961 acaaaaaaag catgcgaagg cgcatgcttt taggatttga gaatattagt cgatttgttt
    10021 cattgcgtcg tctagaactt ttttaagtgt atctgcagag tttttcattt gttctttttc
    10081 tttgtcgttt aaattcattt caacaatatg gcgaacgcct tgacggttaa cgactgcggg
    10141 agcgccgata taaatgtcgt tcataccata atgaccatct agataaacag aaagtggtaa
    10201 gatcgcattt tcgttattta gaattgcctt tgtaatacga gctagagctg cagcaacacc
    10261 gtagaatgta gcgccttttt tattaataat ttcataagct gcatcacgaa cacttacgaa
    10321 aatagtatcc attgcacctt gttcatcttc gctaatccat tcagtgattg gaagaccgcc
    10381 gacagttgtg tggctccatg ctgggaattc tgtatcgccg tgttcgccaa ggatgtaacc
    10441 atggacgtta cgagcatcta cttttagata gtcggcaatt gacatacgga aacgtgctgt
    10501 atcaaggctt gttccagaac cgataacacg ttcttttgga agacctgaga atttccatgt
    10561 agcgtaagtt aagatatcta ctgggttaga agcgattaag aagataccgt caaatccgct
    10621 agccattact tcatccacga tgcctttcat gattttaata ttacgattta ctaaatctaa
    10681 acgagtttca ccaggttttt gtgcagtccc ggcagttaca acaactaagt ccgcatcgtg
    10741 gcagtcgcta taatttgctg agtagatttt cttcggtgta gaaaatggaa cggcatgact
    10801 taaatccatt gcatccccaa tagttctgtc tttatctatg tcaatgatac caaattcttg
    10861 tccaatgctt aagtttacac aagcaaatgc gtaactagaa ccaactgctc cgtcgccaac
    10921 taaaataatt ttttgatgat ctttcatttc gaattcctcc tat
//
LOCUS       DASDYK010000094        10819 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.094, whole genome shotgun sequence.
ACCESSION   DASDYK010000094 DASDYK010000000
VERSION     DASDYK010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10819
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.094"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..501
                     /locus_tag="U0308_002259"
     CDS             <1..501
                     /locus_tag="U0308_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEM2317220.1"
                     /translation="HGEYRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGN
                     RVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGF
                     IYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMIL
                     PIIMEV"
     gene            590..1930
                     /locus_tag="U0308_002260"
     CDS             590..1930
                     /locus_tag="U0308_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM2317221.1"
                     /translation="MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCV
                     LRGCDPKKVLVGAREARNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENF
                     QEAGIETFFGAASFQDSHSLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFL
                     SLEKLPDSVVFIGGGYISFEFASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMK
                     EEGIHFHFDTDITKVENKGEKLHIHGKDGFSLQTDLIIGATGRKPNIAHLSLENANID
                     YTKKGIIVNEKLQTTNNPHIYACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMIY
                     PAIPSVVFTSPKLASIGISAEEAKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIED
                     RESGQIKGAHFLSEEADYMINYVAILMKANLTLADLQSVIFAYPSPASDLTALN"
     gene            1983..2633
                     /locus_tag="U0308_002261"
     CDS             1983..2633
                     /locus_tag="U0308_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317222.1"
                     /translation="MEIWIIAGICAFLIFIAGIVILFFPARRKIGAILTSAGMLLMVG
                     SIIGIIVSFSHYQQVQNDVFNYSSKGTSQATPEETKTYKVNFEDSADNIKKKITTVTV
                     EKKETYSTSASKPVDGSITIALEITNNAVKTLETYPNQGQLEANKLDLNGGDAVLSNF
                     DTTEIKPGETAKGKIVFPVDNLDKVSDISWISYSFLSYLKDSSTPITTETGKIELK"
     gene            complement(2672..4273)
                     /locus_tag="U0308_002262"
     CDS             complement(2672..4273)
                     /locus_tag="U0308_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2317223.1"
                     /translation="MLTVNNVGLRYGDKKLFEDVSIKFLPGNCYGLIGANGAGKSTFL
                     KVLSGELDSQSGNVHIGSGERLAVLRQDHFQYDNELVLNTVIMGHERLYKIMDEKNAI
                     YMKEDFSDEDGIRAAELEGEFAELDGWEAESDAAVLLNGLGIPTDLHGKLMKDLTGGE
                     KVKVLLAQALFGKPDILLLDEPTNHLDIRAIHWLEEFLINFDNTVIVVSHDRHFLNKV
                     CTHIADLDFSKIKLYVGNYDFWYESSQLAQTMMGDRNKKKEEKMKELQDFIARFSANA
                     SKSKQATSRKKMLEKITLEDIQPSSRRYPFIQFKPDREVGNDLLTVTNLSKTIDGVKI
                     LDNLSFSINRNDKVALVGDDEVAKTVLFQILAGEMEPDEGSYKWGITTSQSYFPKDNS
                     EFFEENDMSLVEWLRQFSPEDDSEAFLRGFLGRMLFSGDEVLKKVRVLSGGEKVRCML
                     SKMMLSGSNVLLLDEPTNHLDLESITALNNGLEAFKGAMIFASHDHQLLQTIATRIIN
                     LSKDQFYNKEISYDEYLKEVMNVAE"
     gene            4413..4796
                     /locus_tag="U0308_002263"
     CDS             4413..4796
                     /locus_tag="U0308_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEM2317224.1"
                     /translation="MNYEQILQEKVALCLTLQAAKETFPFDKKTHALTVGGKIFALIH
                     MYHGDLYVSVKCQPERIDLLRDEYLSIKPGYHLNKKHWITLVINENYDVEAETEFALI
                     KNSYQLIFDKLPKKAQNTVKFSAND"
     regulatory      4866..4976
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            5044..5604
                     /gene="thiT"
                     /locus_tag="U0308_002264"
     CDS             5044..5604
                     /gene="thiT"
                     /locus_tag="U0308_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupled thiamine transporter ThiT"
                     /protein_id="HEM2317225.1"
                     /translation="MQNKRLIILLECAIFAAVAMVLSFIPLDIGSSFSISLGMIPMYV
                     IAIRRGFWAAGFAGLLWGLLHFLTGKAYILMPSQAIIEYILAFSFIAFSGVFSKQVRS
                     NLAANQLKKAIEWAWGTMIIGGVARYFWHYVAGVLFWGAYAFQGWGAQLFSIVMNGAS
                     CLGTVLVSGIIISILLKTSPKLFLPK"
     gene            5897..7090
                     /locus_tag="U0308_002265"
     CDS             5897..7090
                     /locus_tag="U0308_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464953.1"
                     /note="Members of the family are the ATP-binding subunit
                     of ABC transporters for substrates such as betaine,
                     L-proline or other amino acids, choline, carnitine, etc.
                     The substrate specificity is best determined from the
                     substrate-binding subunit, rather than this subunit, as it
                     interacts with the permease subunit and not with substrate
                     directly; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="betaine/proline/choline family ABC transporter
                     ATP-binding protein"
                     /protein_id="HEM2317226.1"
                     /translation="MLKFEHVTKTYKGGKKAVNDLTLNIDKGEFVCFIGPSGCGKTTT
                     MKMINRLIEPTEGKIFINDKDIMAEDPVKLRRSIGYVIQQIGLMPHMTIRENIVLVPK
                     LLKWSEEKKQERAKELIKLVDLPEEFLDRYPYELSGGQQQRIGVLRALAAEQNLILMD
                     EPFGALDPITRDSLQEEFKNLQKELGKTIIFVTHDMDEAIKLADRIVIMKAGEIVQFD
                     TPDEILRNPANSFVEDFIGKDRLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMK
                     EKRVDTLLVVDEGNVLKGFIDVEQIDLNRRTATSVMDIIEKNVFYVYEDTLLRDTVQR
                     ILKRGYKYIPVVDKDKRLVGIVTRASLVDIVYDSIWGTVEDATENQEEQADSKTTEPE
                     MKQEG"
     gene            7094..7750
                     /locus_tag="U0308_002266"
     CDS             7094..7750
                     /locus_tag="U0308_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317227.1"
                     /translation="MDAIVTFFQENGHNLLVQTWQHLFISLSAVILGIAVAVPTGILL
                     TRSPKVANFVIGVVSVLQTVPSLAILAFIIPFLGVGTLPAIIALFIYALLPILRNTFI
                     GVRGVDKNLIESGRGMGMTNWQLIINVEIPNSISVIMAGIRLSAVYVIAWATLASYIG
                     AGGLGDFIFNGLNLYRPDLILGGAIPVTILALVVEFALGKLEYRLTPKAIREAREGGE
                     "
     gene            7752..8678
                     /locus_tag="U0308_002267"
     CDS             7752..8678
                     /locus_tag="U0308_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2317228.1"
                     /translation="MKKKFIALFSVLLLTSSLFLSSCSLPGLGGSSKDTIRIGAMATT
                     ESQIVSNILKELIEHDTGLKVEIVNNLGSTIVQHQAMLNGDVDITATRYTGTDLVGPL
                     GEEAIKDPEKALAAVKKGFEERFHQTWFDSYGFANTYVFMVRQDTAKKYNLNTVSDMR
                     KVENELTAGVDNSWMEREGDGYKAFSKAYDIEFKKIFPMQIGLIYTALKNNQMDVALG
                     YSTDGRIPTYNLKLLKDDKKFFPPYDASALATDEILKKHPELKTTINKLKGKISTEEM
                     QKLNYEADGKLKEPSIVAQEFLQKNNYFEGKN"
     gene            8693..9364
                     /locus_tag="U0308_002268"
     CDS             8693..9364
                     /locus_tag="U0308_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317229.1"
                     /translation="MDTLKQLIDYYQTNGSYVMEEFWRHFLMSAYGVIFAAIIAIPLG
                     VYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLGTNTVVLSLFLYSLLPILKN
                     TYTGIRNVDGALLESGKAMGMTKWQVLRLIEMPLALSVIMAGIRNALVIAIGVAAIGT
                     FVGAGGLGDIIVRGTNATNGTAIILAGAIPTAVMAILADVLLGWVERTLNPVKNKRKS
                     LTEAL"
     gene            9477..>10819
                     /locus_tag="U0308_002269"
     CDS             9477..>10819
                     /locus_tag="U0308_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HEM2317230.1"
                     /translation="MKKDKTERTKQSWRKAQNAPSLSEVNNSVAIPKNAKFFRKLFAF
                     MGPGALIAVGYVDPGNWATSIAGGSEFGYTLLSVILISNILAVLLQSLASKLGIVTGR
                     DLAQASSDHFSKPFGFVLWILAELAIIATDIAEVIGSAIALNLLFGIPLIWGVCITAL
                     DIFLVLFLQHKGFRYIEVIVITLMVTILVCFGAEMVMSHPDMQAIAKGFIPQSEIVTN
                     PAMLYIALGILGATVMPHNLYLHSSIVQTRQYARTKEGKKEAIRFSFIDSTFSLTIAL
                     LINASILILAAAAFYTTGQHNVAGIEDAYKLLNPTLGSSIASTVFAVALLASGQNSTL
                     TGTLAGQIVMEGFLNIRLKPVVRRLLTRVLAIVPAVIITALYGANGINELLIFSQVIL
                     SMQLSFAVIPLVMFTSDKQKMGEFVNPTWLKIISWAVAIFIAVLNIYLLFYTLTS"
BASE COUNT         3490 a         1905 c         2112 g         3312 t
ORIGIN      
        1 cacggagaat atcgcatgtt aatcagtcac gctaaattag ctcatgaagt tggtatggca
       61 aaatcagaag tatttatcgt aggtaaaggt gaaattttag aatataaaaa tgataaaatg
      121 acagctggta atcgcgtata ctctggtaat actttaattg atggtttagg tgttggtgat
      181 gttggtaaca tcgtgctacg cgaccgtaaa ttgctctcag aagacgggat tttcattgtt
      241 gtagtaacac ttaatcgtaa atcaaaaacc attacttcag gaccagaaat catttcacgt
      301 ggctttattt atgtgagaga atcagaacat ttgattgaag aatcttccaa agttgttaca
      361 aaaattgttg aaaaaaatct tcaagaaacc ggctttgaat gggcgaaatt aaaacaagac
      421 attcgtgacc aattaaatcg ctacttattt gaacaaacaa aacgacgtcc aatgatttta
      481 ccaattatta tggaagtcta gaatgaactg ctgcacattc gtgtgtggca gtttttttcg
      541 tttgaaagtg aaatcagacg ggaaaacaag ctaggaagga gtgatttaaa tggcaaaatt
      601 tacatatgat gtagtaataa tcggaagtgg cgcaagtggt acaacagtag catttgaagc
      661 acaggcagct ggattaaaag tagcaattgt agaggagcgg agttggggtg gaacgtgtgt
      721 cctcagagga tgcgacccta aaaaagttct cgtcggagca agagaagcaa gaaatctttc
      781 taccagactt cgcggcaaag gtattaagca agcagcgaca attagctgga cagatttaat
      841 ggcatttaaa gaaacttttg ttgagaatgt gccagaaagt cgtttggaaa actttcaaga
      901 agccgggatt gaaacattct ttggtgcagc tagtttccaa gattcccatt ccttacaagt
      961 cggcgatgat ttaatacaag ctaataaaat tgtcatcgca acaggagcaa caccaagcac
     1021 gttaaaagta gaagggcaag aatacattca aaccagtgat gattttttat cacttgaaaa
     1081 actccctgat tctgtcgtgt ttattggtgg tggctatatt tcatttgaat ttgcctccat
     1141 agcactcgca acagggagag aagtgcatat tatccaccat aatagtgaac ctttaaaaaa
     1201 atttgatcct gatttcgtgg ctgcattagt gtccaatatg aaagaagaag gtatccattt
     1261 ccattttgac acagatatta cgaaggttga aaataagggg gaaaaactgc atattcatgg
     1321 caaagatgga ttttcattac agacagattt aattattggg gcaactggta gaaaaccaaa
     1381 tatcgcgcat ttatcattgg aaaatgccaa cattgactac actaaaaaag gcattatcgt
     1441 taatgaaaaa cttcaaacca ctaataaccc tcatatctac gcatgtggcg atgtcgcggc
     1501 aacaaaagga gcacctttaa cacccgttgt cagcatggaa gcagcatttg ttgctaaaaa
     1561 tgtcattggc ggcgacgaaa aaatgattta tccagcaata ccaagcgtcg tttttacgag
     1621 ccccaaactg gcaagcattg gtataagcgc agaagaagca aaagcgcatc cagaaaaata
     1681 tcaaattaaa aatcacgaca caacaaattg gtatacttat aaacgaacca atgaacaaat
     1741 tgcgctcgca aaaatcattg aagatagaga gtcggggcaa atcaaaggcg ctcattttct
     1801 tagtgaagaa gcagattata tgataaatta cgttgccatc ttaatgaaag ctaatctaac
     1861 tttggctgat ttacaatctg ttatatttgc ctatccatct ccagcaagtg acttaactgc
     1921 tttgaactag aggctaaata tgttatagtg agggagaaat tcgcataaaa ggagcaaata
     1981 agatggaaat ttggatcatt gccggaatat gtgctttctt aatttttatc gcaggtatcg
     2041 taattttatt tttcccagcc agacggaaga ttggagctat tttaactagt gcagggatgt
     2101 tattaatggt tggctccatt attggtatca ttgttagttt ttcacattat cagcaagtac
     2161 aaaatgatgt gtttaattat tcttctaaag gaacaagtca agctacccca gaagaaacga
     2221 agacgtataa agttaacttt gaagattccg cagataatat taagaaaaaa atcactactg
     2281 tgacggtcga aaaaaaagaa acttattcaa catccgcaag taagccagta gacggtagta
     2341 ttactatcgc tttagaaatt accaacaatg cagttaaaac tctcgaaacc tatccaaacc
     2401 aaggacaact agaggcaaac aagttagatt taaatggagg agacgctgtt ttatctaatt
     2461 ttgatacaac tgaaattaag cctggcgaaa ctgccaaagg aaaaatcgtt tttcccgtag
     2521 ataatttaga caaagtttct gatatttcat ggatttctta tagttttcta agctatctga
     2581 aagattcatc cacaccaatc acgacagaaa ctggcaaaat cgaactaaaa taaaaacaat
     2641 atcccgaaaa tgggatattg tttttttgtc attattctgc tacgttcatt acttctttta
     2701 gatactcatc ataagaaatt tctttattgt aaaattggtc ttttgataag ttaatgatgc
     2761 gcgttgcgat tgtttgtaat aactgatgat catgagaagc aaaaatcatt gcgcctttaa
     2821 atgcttccaa gccgttattc aatgctgtaa tggattctaa gtccaagtgg ttagtaggtt
     2881 cgtctagtaa aagaacgtta gaacctgaaa gcatcatttt ggataacata caacgaactt
     2941 tttctccacc agataagacg cgtacttttt taagtacttc atcgccactg aatagcatac
     3001 gaccaaggaa gccgcgtaag aatgcttcac tgtcatcttc tggagagaat tgacgtaacc
     3061 attctacaag actcatgtcg ttttcttcaa agaactctga gttatctttc gggaaatagc
     3121 tttggcttgt tgtaattccc catttataac taccctcatc aggttccatt tcaccagcaa
     3181 ggatttggaa aagaactgtt ttagcaacct catcatcgcc aactaaagca actttgtcat
     3241 ttcgattaat cgagaaagaa agattatcaa gaatcttcac accatcgatt gttttagaca
     3301 agtttgttac tgttagaagg tcatttccaa cttcacggtc tggtttgaac tgaatgaaag
     3361 ggtaacgacg actagaaggt tgaatatctt ccagcgtgat tttttcgagc atttttttac
     3421 gacttgttgc ttgttttgat ttcgatgcgt tcgcactgaa acgagcaata aagtcttgta
     3481 attctttcat tttttcttct tttttcttgt tacgatcgcc catcattgtt tgagctaatt
     3541 ggcttgattc ataccagaaa tcatagtttc cgacatataa tttaattttg ctgaaatcaa
     3601 gatccgcaat gtgcgtacac actttattta agaagtgacg gtcatgggat actacgataa
     3661 cagtattatc aaagttgatt aaaaattctt ctaaccagtg aatcgcacgg atgtcaaggt
     3721 ggttggtagg ctcatccaga agtaagatat ctggtttacc gaataaagct tgtgcaagaa
     3781 gcactttcac tttttctcca ccagttaaat ctttcattag ttttccgtgt aagtcagtag
     3841 ggatacctag gccgtttaat aaaacagcag cgtcagattc tgcttcccaa ccatctaatt
     3901 cagcaaattc gccttctagt tctgcagcgc ggataccatc ttcatcactg aaatcttctt
     3961 tcatataaat ggcatttttt tcgtccataa ttttgtatag acgttcatgt cccatgatta
     4021 ctgtgttaag aactagttca ttatcatact gaaaatgatc ttggcgaagg acagctagac
     4081 gctcacctga accaatatgc acattaccac tttgtgaatc aagctcgcca gaaagcactt
     4141 ttaggaacgt tgatttacca gcaccatttg ctccaataag accataacag ttacctggta
     4201 aaaatttaat cgaaacatct tcaaatagct ttttatcgcc gtagcgtaag ccaacattat
     4261 ttacagttaa cattttcttc ctccaatact aagttacttc ttcttgaaat cagaaaaagc
     4321 acaattacta ctattttaac atggttagtg tagcaaagaa agcatacaca cataaataaa
     4381 tgttataata tcaaaataag gaggagagcc ggatgaatta cgaacaaatt ttacaagaaa
     4441 aagtcgcgct ttgtctgact ttgcaagctg ccaaagaaac atttccgttt gataaaaaaa
     4501 cgcacgcttt aacagttggt gggaagatat ttgcgctcat acatatgtat cacggggatt
     4561 tatatgttag cgttaaatgt cagcctgaaa gaattgattt gttgcgtgat gaatatttga
     4621 gcataaaacc aggttaccat ttaaataaaa agcattggat tacacttgta ataaatgaaa
     4681 attacgatgt ggaagcagaa actgaatttg ccttaatcaa aaatagttat cagcttattt
     4741 ttgataaact accgaaaaaa gcacaaaata ctgtaaaatt ttctgcaaat gattaaagaa
     4801 aacaaataat tctttacaaa aaagaagtgc atgctataat aattgttgta cgataatttc
     4861 atagacgtta ccacaggggg ggcttcttag ctgagattga gtccacgtgt ttttggattc
     4921 tgaccctttg aacctgttcg ttaatacgag cgtagggatt gtggcgattg catttctaac
     4981 aatagaaact gctttcttct ggggtacgtt tttgaccaaa aagaagaggg gagtttattt
     5041 tttatgcaaa acaaacgatt aatcatttta cttgagtgtg ctatctttgc tgcagttgcg
     5101 atggtattaa gtttcatccc gctagacatt ggttccagtt tttccatctc gcttggaatg
     5161 attccaatgt atgttatcgc gattcgacgc ggtttttggg cggctggatt cgcaggattg
     5221 ttatgggggt tactacattt cttaacaggt aaggcatata tattaatgcc ctcccaggca
     5281 attattgagt atattttggc attcagtttt attgctttca gcggtgtctt tagcaagcaa
     5341 gttcgaagta atttagctgc taatcaactc aaaaaagcaa ttgaatgggc gtggggaacc
     5401 atgattattg gaggagtagc tcgatatttt tggcactatg tcgcaggagt attattctgg
     5461 ggtgcttatg catttcaagg ttggggagca caactatttt caatcgtgat gaatggagct
     5521 agttgccttg gtaccgtcct tgtttcaggt atcattattt cgatattatt gaagacttca
     5581 ccaaaattat ttttaccaaa ataaccaaaa ggtccagaag caattgcttt tgggcctttt
     5641 taagtgtgtt ataattaaat aaatactata ttgcagctta ttacaatgct cattttcacg
     5701 attacgagtt tagcatcgat gtcacacgtg ccacaagtac gaaatcatct tgtttagtaa
     5761 cttccgtttg aatgtaacac tgtctttaag ctgttttttt gtatttaaaa agtttaaatc
     5821 tatactagtt agggaaatta gttaccgatt gccaattttt ttggtattgg taaagaaaaa
     5881 atggaggtgt gtaagcgtgt taaaattcga acacgtaaca aagacttata aagggggcaa
     5941 aaaagcagtt aatgatctaa cactaaacat cgataaagga gaatttgttt gttttatcgg
     6001 tccaagtggt tgtgggaaaa cgacaacaat gaagatgatt aaccggctta ttgaacctac
     6061 agaaggaaaa atatttatta atgataaaga catcatggcg gaagatcccg tcaaactaag
     6121 acgttctatt ggttatgtta ttcagcaaat tggcttgatg ccacatatga cgattcgtga
     6181 aaatatcgtc cttgtaccaa aattacttaa atggtccgaa gagaaaaaac aagaacgggc
     6241 aaaagaatta attaaattag tagatttacc agaagagttt ttggaccgtt acccttacga
     6301 attaagtggt ggacagcagc aacgtatcgg tgttttaaga gcgcttgcag cagagcaaaa
     6361 cttaattctg atggatgaac cttttggagc actagatcca attactcgtg attccctaca
     6421 agaagaattc aaaaatttgc aaaaagaact tggcaagacg attatttttg ttacccatga
     6481 tatggatgaa gcgattaaac tggcggaccg tatcgtcatt atgaaagctg gtgaaattgt
     6541 tcaatttgat actccagatg aaattttgcg taaccctgcg aattcgtttg tagaagattt
     6601 catcggtaaa gatcgcttaa ttgaagcgaa accagatgtt acacaagtag cacaaatcat
     6661 gaacacaaat ccagtctcta ttacagcgga caaatcactc caagctgcga ttactgtcat
     6721 gaaagagaaa cgagtagata cattacttgt tgtcgatgaa ggtaacgtgt tgaaaggatt
     6781 tatcgatgta gagcaaattg atttaaatcg tcgtacggca acttctgtca tggatatcat
     6841 cgagaaaaat gtcttttatg tgtatgaaga taccttgctt cgcgatactg tacaacggat
     6901 tctaaaacgc ggctataaat acattcctgt agtggataaa gataaacgac ttgtcggaat
     6961 tgttactcgt gccagcttag tggatatcgt gtatgactcc atttggggta cggtagaaga
     7021 tgcgacagaa aatcaggagg aacaggcgga ttccaaaacg acagaaccag aaatgaagca
     7081 ggagggataa gctatggacg caattgttac atttttccaa gaaaacggcc ataacttgct
     7141 tgttcaaaca tggcaacatt tatttatctc cctatctgct gttattttag gtattgcggt
     7201 tgcagtacca actgggattt tacttacacg ctcaccaaaa gtagcaaatt ttgtaattgg
     7261 tgttgttagt gttttgcaaa ccgttccttc tcttgccatt ttggcgttta ttattccgtt
     7321 tcttggtgtt ggtactttac cagcgattat tgcgttattt atttacgcac ttttaccaat
     7381 tttacgaaac acgtttattg gtgttcgagg agtcgacaaa aatttaatcg aatctggtcg
     7441 aggcatgggg atgacgaatt ggcaactaat tattaatgtc gaaattccta actccatctc
     7501 cgttattatg gctggtattc gtttatctgc agtatatgtt atcgcttggg caacacttgc
     7561 ttcttacatt ggagcaggtg gactaggaga ctttattttt aatggtttaa acttataccg
     7621 cccagattta attcttggtg gggcaattcc tgttaccatt ttagcccttg tagtagaatt
     7681 cgcgcttgga aaattagaat atcgtctaac tccaaaagcc atccgtgaag ctcgggaagg
     7741 gggagaataa catgaagaaa aaatttatcg cgttattcag cgtattacta ctaactagtt
     7801 ctcttttctt atctagctgt tctttaccag gacttggagg cagttccaaa gatactattc
     7861 gcatcggtgc aatggcaaca actgaatctc aaatcgtttc gaatatttta aaagaattaa
     7921 ttgaacatga tactggccta aaagtagaaa tcgtcaacaa ccttggatca actatcgttc
     7981 agcaccaagc gatgttaaat ggggatgtag atattactgc aacaagatat accggtacag
     8041 atttagttgg tccacttggt gaagaagcaa ttaaagatcc agaaaaagct ttagcagctg
     8101 ttaagaaagg ttttgaagaa cgtttccacc aaacctggtt tgattcttac ggctttgcta
     8161 atacgtatgt gtttatggta cgccaagaca ctgcgaaaaa atacaattta aacaccgtaa
     8221 gtgatatgcg aaaagtagaa aatgagctca cagctggtgt cgataattct tggatggaac
     8281 gtgaaggcga tggctataaa gcattttcaa aagcctatga tattgaattc aagaaaatat
     8341 ttccaatgca aattggctta atctacacag cgcttaaaaa caatcaaatg gatgtggcgc
     8401 ttggttattc aacagacgga cgtatcccaa cttacaattt aaaactatta aaagatgata
     8461 aaaaattctt cccaccatat gatgcttcag ctctagcaac agatgaaatt ttaaagaaac
     8521 atccagaatt aaaaacgact atcaataaat taaaaggtaa aatttcgaca gaagaaatgc
     8581 aaaaacttaa ttatgaagcg gatggcaaat tgaaagaacc gtccatcgta gcgcaagaat
     8641 tcttgcaaaa aaataattac tttgaaggta aaaactaagg aggtgccaaa agatggacac
     8701 attaaaacaa ttaattgatt attaccaaac aaatggaagt tatgtcatgg aagagttctg
     8761 gcggcatttc ttgatgagtg cttacggagt tatcttcgca gcaatcatcg caataccgct
     8821 cggagtatat attgcaagaa aaaaacgctt agctggctgg gttatccaaa tcgctaatat
     8881 catccaaaca attccggcac tagcaatgtt agccgtactt atgcttataa tgggcttagg
     8941 gacgaataca gtcgtcttat ccttattcct atattcttta ctaccaattc taaaaaacac
     9001 ctatacgggc attagaaacg ttgatggcgc acttttagaa tctggtaaag cgatggggat
     9061 gacaaaatgg caagtactac gcctcataga aatgccactc gcattatctg ttattatggc
     9121 aggtattcga aatgcacttg ttattgctat tggtgtagcg gcaattggga cattcgttgg
     9181 agcgggaggt ctcggtgata ttattgtacg cggaacaaat gcaacaaatg gtactgctat
     9241 cattttagct ggtgctatcc caaccgcagt tatggccata ttagccgatg tacttctcgg
     9301 ttgggtcgaa cgcacactaa acccagttaa aaacaaaaga aaatcactaa ctgaagcctt
     9361 ataaaaatat acgaaaacac aacctatcat ttctataaaa cggttgtgtt tttcgtttga
     9421 caaagaatgt ttcccgtagt aaacttttta tcataaacga aagaaggtca gggagcatga
     9481 aaaaggataa aacagaacgt acaaaacaaa gctggagaaa agcacagaat gctcccagct
     9541 taagcgaagt aaataattcc gtagctattc ctaaaaacgc aaaatttttc cgtaaattat
     9601 ttgcctttat ggggccaggt gcacttattg cggtcggcta tgtcgatcca gggaactggg
     9661 caacttctat tgccggcggg tcagaatttg gttacacatt gttatccgtt attttaattt
     9721 ctaatattct agccgtttta ttacaatcac ttgcatcaaa attaggcatt gtcaccggtc
     9781 gcgatttagc ccaagcttca agtgatcact tttctaaacc atttggattc gttctttgga
     9841 ttttagctga attagcgatt atagcaacag atatcgcaga agtcatcggt agtgcgattg
     9901 cgcttaattt actatttggg attccattaa tttggggagt ttgtattact gcattagata
     9961 tttttctcgt attattttta caacataaag gtttccgcta catagaagtt attgttatta
    10021 ctttaatggt tacgattctt gtatgttttg gtgcggaaat ggtgatgtct catcctgata
    10081 tgcaagcaat agcaaaaggt tttattccac aatcagaaat tgttactaat ccagctatgc
    10141 tttatattgc acttggtatt cttggggcaa cagtgatgcc acataattta tatttgcatt
    10201 catctattgt tcaaaccaga caatacgctc gaacaaaaga agggaagaaa gaagcgattc
    10261 gtttttcctt tatcgattcc actttttctt taacgattgc attattaatc aatgcatcga
    10321 ttttaatttt agcggctgcc gctttttata cgaccggtca gcataatgtc gctggtattg
    10381 aggatgctta caaattactc aatccaacac ttggaagcag tatcgccagc actgtttttg
    10441 cagtagcatt actcgcatca gggcaaaatt ctactttaac aggaacatta gctggtcaaa
    10501 tcgtcatgga aggtttcctt aatatccgtt taaaaccagt agtgcgccgt ttgttaacac
    10561 gtgtacttgc aatcgttcca gctgttatta tcacagcact ttacggggca aatggtatca
    10621 atgaactact catttttagc caagttattc tatcaatgca attatcgttc gcagttatcc
    10681 cattagttat gttcacaagt gataaacaaa agatgggcga attcgtcaat ccaacatggt
    10741 taaaaatcat ttcttgggct gtcgccattt ttattgcagt cttaaacatc tacttgttat
    10801 tttatacttt gacgtcatt
//
LOCUS       DASDYK010000095        10747 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.095, whole genome shotgun sequence.
ACCESSION   DASDYK010000095 DASDYK010000000
VERSION     DASDYK010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10747
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.095"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            27..842
                     /locus_tag="U0308_002270"
     CDS             27..842
                     /locus_tag="U0308_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019381669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEM2317231.1"
                     /translation="MDWDQFWNHIISVGIKIAILIALYFIFRVVGNKIIRSFFRKYRQ
                     QQAVSVGRADTLESLISNFYGYVLFFTFAILLLQNFMDVTAIIASAGVASLAIAFGAQ
                     GLVSDVVTGFFILLERQLDVGDTITIGLVNGTVEALGLRTTQVRDFDGTLHFIPNRQI
                     MVVSNHSRGNMRVMVDIQISPHEDPEKAIKIIGEVCDVAAKENKNIVEPPVVLGVQNI
                     DATNMIIRVVGKAVNGEQYSVQRDLLKDIREALAENEIELPLNFVSTFGPNNN"
     gene            complement(886..2001)
                     /locus_tag="U0308_002271"
     CDS             complement(886..2001)
                     /locus_tag="U0308_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyldiaminopimelate deacetylase"
                     /protein_id="HEM2317232.1"
                     /translation="MLNEFIAIRRELHQIPETGYKELKTQAYLLDYISKLPSEHLEVK
                     KWRTGILVLVKGTNPEKTIGYRTDIDALPITEETGLPFASKHPGNMHACGHDLHMSIA
                     LGVLTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKV
                     GEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDP
                     MDSAVITIGRIHGGEIQNVIAETAYLDGTIRTLSPETMEIVWTRLKQLAKGWEEAYQC
                     EVEFHPGSDYYQVDNDPVETEAFIHFLEEQYPESYVPARSAMTGEDFGYFLSEIKGFM
                     FWLGVDSEYSLHHAKLSPKEEAIPFAIDVLIHFLESK"
     gene            complement(2065..2775)
                     /gene="dapD"
                     /locus_tag="U0308_002272"
     CDS             complement(2065..2775)
                     /gene="dapD"
                     /locus_tag="U0308_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-acetyltransferase"
                     /protein_id="HEM2317233.1"
                     /translation="MEQMDAHQIISFIQNSKKATPVKVYLKGDLEKIDFPSDVKTFIT
                     GNAGTIFGEWAVVEPFLEANKANIEDYVIENDRRNSAIPLLDMKNINARIEPGAVIRD
                     QVTIGDNAVIMMGASINIGSVIGDGTMIDMNVVLGGRATVGKNCHIGAGSVLAGVVEP
                     PSAQPVVVEDNVVVGANVVVLEGVRIGEGAVVAAGAIVTKDVAPGTVVAGIPARELKK
                     LDAKTASKTEIMQELRQL"
     gene            complement(2823..3701)
                     /locus_tag="U0308_002273"
     CDS             complement(2823..3701)
                     /locus_tag="U0308_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2317234.1"
                     /translation="MIVTEYELLVCLAEELNMRKSAEKLFLSQPALSQRLQTIESRWN
                     TKIFIRTQKGLLLTPEGEAIVRHASSVIEREHTIQEKLEAMEGVVRGTLRIACASVVA
                     QMWLPRVLKAFSRTYPNVQISLVTGWSSEVTQQLAAGNVHIGIVRGSSTWKSVQKPLF
                     NDKLILVDTEITKIEEVFQTNRPFIQFRSDSNYYQVIQDYWQRNFGKMPRQAMLMDQM
                     ETSRQMALNGIGFAILPEVTMIGYTDKINKIPLTEKDGSILSRETNLLTYEQSLSLPQ
                     VKAFLEITDKFLEQVK"
     gene            complement(3698..4150)
                     /locus_tag="U0308_002274"
     CDS             complement(3698..4150)
                     /locus_tag="U0308_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEM2317235.1"
                     /translation="MISNRFGQFIDNELADSMISAEKVAHVQLGNNLEHALLVLTKCG
                     YSVIPVLDFEFKLHGLISAAMITDAILGLERIEFERLEDLKVEDVMQTDFPVIKDFNN
                     NERIVHLLVDHPFVCVVDADHHFEGIVTRRVVLKQVNRYIHLQVEENR"
     gene            complement(4352..4585)
                     /locus_tag="U0308_002275"
     CDS             complement(4352..4585)
                     /locus_tag="U0308_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkuJ family protein"
                     /protein_id="HEM2317236.1"
                     /translation="MSQLLGIIQRLHAMQEDESAETQARRFEKNGTPVCEVKFFQASN
                     SFEVEIYGDNSKYQFDDIDMTAIEIFETLQENE"
     gene            complement(4890..5111)
                     /locus_tag="U0308_002276"
     CDS             complement(4890..5111)
                     /locus_tag="U0308_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317237.1"
                     /translation="MTKPGKYEALFFPTKDGLLKIHAYGFNPCGSWGEVFATIGDQTI
                     CVKGFNRHKTIVRATKMIISATANRKNEF"
     gene            5331..6476
                     /locus_tag="U0308_002277"
     CDS             5331..6476
                     /locus_tag="U0308_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEM2317238.1"
                     /translation="MTKSIRPELRDIQVSGIRTFNTRVTGIPDMIRLTLGEPDFPTPE
                     HVKQAAISAIEENFTNYTPNAGMPELLEAASTYFHEKYDLSYNNKEIIVTVGATEAIS
                     VALQTILEPGDEVILPDPIYPGYEPLITLNRAHPVKVDTTETNFKLTPEQLRAHITPK
                     TKALIIPYPSNPTGVTLSKKELFALAEVLNETGIFVIADEIYSELTYHEEHVSIAPLL
                     REQTIVINGLSKSHAMIGWRIGFLLAPEALTQEMLKIHQYSVTCASSISQKAALEALT
                     NGKDDAFQMRTEYKTRANFTQDRLEKMGFTVIPPDGAFYFFVKLPDEITENAFDWAVK
                     LAEEAKVAVVPGNAFSEKGDRYFRLSYATSFNNLAEALDRMAQFIAK"
     gene            complement(6513..7373)
                     /locus_tag="U0308_002278"
     CDS             complement(6513..7373)
                     /locus_tag="U0308_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEM2317239.1"
                     /translation="MEKIGFVGTGVMGSSMAGHLLEAGYEVLVYTRTKTKAEDLLEKG
                     ALWIKTPGELANKVDILISMVGYPKDVEELYLGENGFLENLAVGTVAIDMTTSSPALA
                     KKMAEFGREKGIGVLDAPVSGGDIGAKNGTLAIMVGGSEDVFLKVKPIFDILGSSVIL
                     QGDAGAGQHTKMVNQIAIASNMIGVTEAIIYAEAAGLNPSSVLDSISGGAAGSWSLAN
                     LIPRVLKDDFSPGFFIKHFIKDMGIAISEAKQMGLELPGLTLAEKMYQTLAEQGLSEE
                     GTQALIKYYR"
     gene            complement(7386..8420)
                     /locus_tag="U0308_002279"
     CDS             complement(7386..8420)
                     /locus_tag="U0308_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEM2317240.1"
                     /translation="MVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVY
                     ATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLI
                     IGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPR
                     YNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANET
                     ISEAEAMRGYLIEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFH
                     LFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFA
                     FLAIIGVTFR"
     gene            complement(8533..10251)
                     /gene="ptsP"
                     /locus_tag="U0308_002280"
     CDS             complement(8533..10251)
                     /gene="ptsP"
                     /locus_tag="U0308_002280"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEM2317241.1"
                     /translation="MAKELKGIAASDGIAIAKAYLLVEPDLSYEKTEVTDVESEVKRF
                     ESALEVSRTELSMIREKAAKDLGEDKAQIFDAHLLVLNDPELTGPIEESIKNSKTNAE
                     TALQETTDMFIGMFESMDNEYMRERAADIKDVRKRVLSHLLGVTIPNPALIDEEVVVV
                     AADLTPSDTAQLNRNFVKGFVTDIGGRTSHSAIMARSLEIPAVVGTKEVTASVAKNDI
                     VIIDGLEGNVIIHPTEEQIAHYEKIKSDFALQQAEWDKLKNEKTVSKDGVHVELAANI
                     GTPNDLEGVISNGGEAVGLYRTEFLYMGRDNFPTEEEQFEAYKAVVSGMDGKSVVVRT
                     LDIGGDKTLPYLELPEEMNPFLGFRAIRLCFANEELFRTQLRALLRASVYGNLKIMFP
                     MIATVNEFRQARDILLDEKAKLKAAGTEVSDSIELGIMIEIPAAAVLADQFAKEVDFF
                     SIGTNDLIQYTMAADRMNERVSYLYQPYNPSILRLVKMVIDASHKEGKWTGMCGEMAG
                     DQTAVPLLLGLGLDEFSMSASSILKSRSLIKRLDQSEMVKLAEEALNKSTAEEVVELV
                     EKYTAE"
     gene            complement(10251..10517)
                     /locus_tag="U0308_002281"
     CDS             complement(10251..10517)
                     /locus_tag="U0308_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein HPr"
                     /protein_id="HEM2317242.1"
                     /translation="MEQASFVVIDETGIHARPATLLVQAASKYSSDVQIEYTGKKVNL
                     KSIMGVMSLGIGKGADITIYTEGSDEKEAIEGLTEVLKKEGLAE"
BASE COUNT         3251 a         2275 c         1779 g         3442 t
ORIGIN      
        1 atttactcaa aaagtggttc agttctattg actgggacca attttggaat catattattt
       61 cagtaggaat aaaaatcgcc attttaattg ctctttattt tattttccgc gtggttggga
      121 ataaaattat ccgtagtttc ttccgcaaat atcggcaaca acaagcagtt tctgttgggc
      181 gcgcggacac gttagaaagc ttgatttcta atttttacgg ctatgtttta ttcttcactt
      241 ttgcgatttt attattacag aactttatgg atgttacagc gattattgca agtgctgggg
      301 tggcgagttt ggctattgcc tttggtgcgc aaggacttgt tagtgacgtt gtgactggat
      361 tttttatttt acttgaacgt caacttgatg ttggtgatac gattaccatt ggactagtta
      421 atggaacagt agaagcactt ggacttagaa caacacaggt acgtgatttt gatggcacgc
      481 ttcatttcat tcctaacagg caaattatgg tcgttagtaa tcattcgcgc ggtaatatgc
      541 gtgtgatggt ggacattcaa attagtccac atgaagatcc ggaaaaagca attaaaatta
      601 tcggtgaggt ttgtgacgta gctgcaaaag aaaataaaaa tatcgttgag ccccctgttg
      661 tattaggtgt gcaaaacatt gacgcaacaa acatgattat ccgcgtagtc ggtaaagcag
      721 tgaacggcga gcagtattct gttcaacgtg acttactcaa agatattcgc gaagcactcg
      781 cagaaaacga aatcgagtta ccacttaatt ttgtcagcac cttcggacca aataataatt
      841 aaaaagacgc caattcgctc cttttgagaa cgaattgacg tctttttatt tactttccaa
      901 aaagtggatt aatacatcaa ttgcaaatgg aatagcttct tcttttggac taagtttcgc
      961 atgatgcaaa ctgtactcgg aatccacgcc taaccaaaac ataaaccctt taatttcgga
     1021 taaaaagtaa ccaaaatctt ctccagtcat cgccgaacga gctggcacat aactttctgg
     1081 atattgttct tccaaaaagt ggatgaatgc ttctgtttca actggatcat tgtccacttg
     1141 ataataatcc gagccaggat gaaattcaac ttcgcattgg taagcttctt cccagccttt
     1201 cgctagctgt ttcaaacgag tccaaacaat ctccattgtt tcaggggaaa gcgttcgaat
     1261 ggttccatct aaataagcag tttccgcaat gacattttga atttctccgc catgaattcg
     1321 gccaatcgta ataactgcac tatccattgg atcaatattc cgacttataa tcgtttgcat
     1381 ttgcccaaca aacgcacttg ctgcgacaac catatcattc gccaaatgag gatacgccgc
     1441 gtgtccacct tttcctttaa acgaaataaa aagttccgat gtattcgcaa aaagtaaacc
     1501 tggcttaatt gcaatttctc cgactttgta ttctggtgcg atatgaagcc cataaatgct
     1561 atccggtcgc cactcggcaa attcagcgct ttccatgatg ggttttgcac cacctggacc
     1621 ttcttcggca ggctggaaaa cgaaaagcaa attatctttg gctggtttac tcgcaaaatg
     1681 cgtcaataca ccaagcgcga tactcatatg taaatcgtgc ccacaagcat gcatattgcc
     1741 aggatgtttt gatgcaaaag gcagcccagt ttcttctgta attggcaacg catcaatatc
     1801 ggtacgataa ccaattgttt tttctggatt agttcctttt actaaaacca aaatccccgt
     1861 acgccatttt ttcacttcta aatgttcact cggtaatttg ctaatatagt ctaataaata
     1921 ggcttgggtt ttaagctctt tataacctgt ttcaggaatt tggtgtaact ctcgtcgaat
     1981 ggcaataaat tcatttaaca cagcgattct ctccttctaa aaaaggactg cttcgccaac
     2041 agacgaaaca gttcccttta atttttaaag ttgacgaagt tcttgcatga tttcagtttt
     2101 agaagctgtt tttgcgtcta attttttaag ttcacgtgca ggaatcccag ccacaactgt
     2161 tccaggagct acgtcttttg taacgattgc gccagctgct acgactgcgc cttctccaat
     2221 acgtacacct tctaaaacaa ccacattggc gcctacaaca acattatctt ctacgacaac
     2281 tggttgtgcg gatggtggtt ccactacgcc agcaagcaca gaacctgcac cgatatggca
     2341 atttttacca accgttgcgc gcccgcctag aacaacattc atatcaatca tcgtaccgtc
     2401 accgataaca gaaccaatat taatgcttgc tcccatcata attacagcat tatcaccaat
     2461 agttacttgg tcgcgaataa ctgcgcctgg ctcaatacgt gcgttaatat ttttcatatc
     2521 taacaaagga atagccgagt tacgacgatc attttcgata acataatctt caatattcgc
     2581 tttatttgct tctaaaaatg gctcaacaac tgcccattct ccaaaaatag ttcccgcatt
     2641 tccagtaatg aaagttttaa catcactagg gaaatcaatt ttttctaagt cccctttaag
     2701 gtaaactttt acaggtgttg ctttcttgct attttgaata aaagaaataa tttgatgtgc
     2761 atccatttgt tccatgaatt tttgtcccct tccgatacgt tctgttttct attttgccat
     2821 agctatttaa cttgttcaag gaatttatct gttatttcta aaaacgcctt cacttgtggt
     2881 aaactgagtg actgttcata ggtcagcaag ttggtttccc ggcttaaaat cgagccatct
     2941 ttttccgtta agggaatttt gttgatttta tctgtgtagc ctatcatcgt cacttccggt
     3001 aaaattgcaa aaccaatacc atttaaggcc atttgtctag aggtttccat ctgatccata
     3061 agcattgctt ggcgtggcat ttttccgaaa tttcgttgcc agtagtcttg aataacttgg
     3121 taataattcg aatcactgcg aaattgaata aatggtcgat tagtttggaa aacttcttca
     3181 attttggtaa tttctgtgtc tactaaaatt aatttgtcat taaataacgg tttttgaaca
     3241 cttttccatg tggagcttcc acggacaatg ccgatatgga catttccagc agcgagttgt
     3301 tgcgtaactt cactgctcca gccagttaca agtgaaattt gcacattagg gtacgttctt
     3361 gaaaatgctt tcagaacccg aggaagccac atttgcgcca ctacgcttgc acaagcaatt
     3421 cgtaatgttc cgcggacaac gccttccatc gcttcgagtt tttcttgaat agtgtgctct
     3481 cgttcaatga cactagacgc atgacgaaca atagcttctc cttctggtgt aagcagtaag
     3541 cctttttgtg tacgaataaa aattttggta ttccatctac tttcaatcgt ttgtaagcgt
     3601 tgcgataagg ccggttgact taaaaatagt ttttccgcac ttttacgcat attaagctct
     3661 tctgctaaac aaacaagtaa ttcatattct gttacaatca tctattttcc tccacctgca
     3721 aatgaatata acgattgact tgttttaaaa caacacgtct tgttactatc ccttcaaaat
     3781 ggtggtcagc atctacaaca catacaaaag gatggtccac aagtaagtgc acaattcgtt
     3841 cgttattgtt aaaatctttg attactggga aatccgtttg catgacatcc tctactttta
     3901 agtcttctaa tcgttcaaat tcgatacgtt cgagtccaag aatggcatcc gtaatcattg
     3961 ctgcacttat taatccatgg agtttaaatt caaagtctag tacaggaata actgaataac
     4021 cacatttagt taaaacaagt aatgcatgtt ctaaattatt accaagctgt acatgagcaa
     4081 ccttttcagc ggaaatcatc gaatcagcta gttcattatc aataaattgt ccaaatctat
     4141 ttgagatcat ttagaatctt cctcttcctt tattttcaag ctctacgaag tttctttcaa
     4201 ctttttaaaa taaatcgaaa cttttccatc tcctattcta ccatactatt tggtctaatt
     4261 tctttcattt agtgcttgaa aacaaaaaaa gctgtgaata taaattcaca gccccctaag
     4321 taaaccaccg gcttatccga tctttaccat gttattcgtt ttcttgtagc gtttcaaaaa
     4381 tttcgatagc agtcatatca atatcatcga attgatattt actattgtcg ccgtagattt
     4441 ctacttcaaa tgagttagaa gcttgaaaaa actttacttc gcacacgggc gtaccatttt
     4501 tttcaaaacg tcttgcttgt gtttcagcag actcatcttc ttgcattgca tgtaaacgtt
     4561 gaataattcc caataactga gacatcttac actctcctct caaatccacc atctgacgtg
     4621 caaaaattgg cataccttgc tattatacgc gcgtggcaat gcttttttac atatttcctc
     4681 atatctggtt ttttcgccat atcttatttc tttcactata ctaccaaatt ttatcgcaaa
     4741 ccgcacgtat aacgcaaggg ttctggaaat attcagaaaa agaaattatt ttaaattaac
     4801 ctaaaagaca tgatttgttc tactttgccg ttattttatc caaaaaaaag actataaaaa
     4861 gggattaacc ttcctacagt ctttgataat taaaattcat ttttccgatt agcagtagca
     4921 ctgataatca tttttgtcgc tcgtacgatg gttttgtggc gattgaaacc tttaacgcat
     4981 attgtttgat caccaattgt tgcaaatact tcgccccatg aaccacaggg attaaagcca
     5041 taagcatgta tttttagcaa gccatctttt gttggaaaaa agagagcttc gtatttacct
     5101 ggtttagtca tatccggtgg ccccttccgc attgaagtaa tcatttctaa ctgaaaatga
     5161 ttatcattat taaaactatc ttatagtatt ctacataaaa gtgcaaggtt ttttaggtat
     5221 attttcagac attttgcttt tcttcctttt taagctataa tggaatgaaa tcacgaagct
     5281 tactcccacc tgattttcac gggattttct tataaagaaa ggtgacgaaa atgacaaaat
     5341 ctattcgacc agaattacgc gatattcaag taagtggtat cagaactttt aatacacgag
     5401 tgacgggtat tcctgatatg atccgtttaa cacttggcga acctgacttt ccaacgcctg
     5461 agcatgtcaa acaagcggcc atttcagcaa tagaagaaaa tttcaccaac tatacaccca
     5521 atgccgggat gccagaatta ctcgaagcag cttccactta ttttcatgaa aaatatgact
     5581 tgtcctataa taataaagaa attatcgtta cggtcggcgc tacagaggct atctccgttg
     5641 ccttgcaaac gattttggag cctggggatg aagttatctt accagaccct atttatccag
     5701 gttacgagcc tctaattacg ttaaatagag cgcacccggt taaagttgat acgaccgaaa
     5761 ctaatttcaa attaacacct gaacaattac gagcacatat cacaccaaaa actaaagcac
     5821 ttatcattcc ttatccatcc aatccgaccg gtgttacact ctctaaaaaa gaacttttcg
     5881 cattagcaga agtactaaat gaaacaggta tttttgtcat tgctgatgag atttacagtg
     5941 aattaactta tcacgaggag cacgtgagca ttgcgccttt actaagagag cagacaatcg
     6001 ttatcaacgg tttatcaaaa tctcacgcaa tgattggttg gcgaattggc tttttacttg
     6061 caccagaagc ccttacacaa gaaatgttga aaatccatca atattcggtt acttgcgcaa
     6121 gttccatttc ccaaaaagca gcactagaag ctcttactaa cggcaaagac gatgcttttc
     6181 aaatgcgaac tgaatacaaa acacgcgcta atttcactca agatcgacta gaaaaaatgg
     6241 gctttactgt catcccgcca gatggtgcat tttacttctt cgtcaaactt cccgatgaaa
     6301 taaccgaaaa tgctttcgat tgggctgtaa aacttgctga agaagccaag gttgcagttg
     6361 ttcctggaaa tgctttttcc gaaaaaggcg atcgttactt ccgtctttct tatgctactt
     6421 cctttaataa tcttgctgaa gcattagatc gaatggctca gtttatagca aaataaaaaa
     6481 acatccacta acttaaatta gtggatgttt ttttaacgat aatatttaat gagcgcttgc
     6541 gtcccttctt cactcaaacc ttgttcagct agcgtttgat acattttttc agctaaagtt
     6601 agcccaggaa gttctaagcc catttgtttt gcttctgaga ttgcgattcc catatctttt
     6661 ataaaatgct taataaagaa acccggagaa aaatcatcct taagtacacg tggaatcaag
     6721 tttgcaagcg accaactgcc tgctgcacca cctgaaattg aatcgagaac acttgatgga
     6781 ttaagtccag ccgcctccgc ataaatgatc gcttcagtca caccaatcat gttggaagca
     6841 attgcaattt gattcaccat tttggtatgt tgtccagcac ctgcatcacc ttgcagaatc
     6901 acactgctac caagaatgtc aaaaattggt ttcactttta aaaatacgtc ttcagatcct
     6961 cctaccataa ttgcgagcgt gccatttttc gcgcctatgt cgccacctga aacaggagca
     7021 tcgagtacac cgattccttt ttcacggcca aattcagcca tttttttagc taatgccggt
     7081 gaggaagttg tcatatcgat tgctactgtg ccaaccgcta aattttctaa aaagccattt
     7141 tcgcctaagt aaagctcttc cacatctttt ggataaccaa ccattgaaat taatatatcc
     7201 actttattag ccaattctcc tggtgttttt atccatagtg ctcctttttc aagtaaatct
     7261 tctgcttttg tttttgtgcg agtatacacc aatacttcat aaccagcctc cagtaaatgc
     7321 cctgccatac tcgaacccat tacgcctgta ccaacaaatc caattttctc catcaggcta
     7381 acctcctatc taaaagtaac acctataatc gctaaaaacg caaaaaacaa tagtaataaa
     7441 ccaagtaaga ccatatgtac ttttttatac attacagtaa tagcaataaa ttctcgaatt
     7501 aacgcattag gcatatagta taaagctgtt tttgcaccaa tcccttgact cttcaagccc
     7561 gcttttcttg cataaatacc tgctctaaat aaatgaaaat tattcgttga aaataaacta
     7621 ttatagtttg acataattgc atccattttt gcctttgaaa atttcatatt ttgcagtgta
     7681 ttaacggatt gatcttccat aataataaaa ttttcatcaa tgcctttttc tattaaataa
     7741 cctcgcatcg cttctgcttc tgaaatagtt tcattagcac cttgtccacc agatacgata
     7801 aaagtagctc gtttgccttt tttggcgtat tgcttgtcgt agaacttaat agcgcgattc
     7861 aaccgactag caagcaatgg aggtactcta tcaccgccta tcagaccact tcctagtaca
     7921 atcagaaaat cttgattata tcttgggaaa ttaaattgat agagaaaagt cgataaaaga
     7981 aacgataaaa ataaaaagga aaaataacca actaatgcca caataaaaac taccacaatc
     8041 ccaagaatcg gactacctgt ttttaaaata ctaccgaacc atgtaataat aagtgctaaa
     8101 atgcctaaac caataattaa aggaagcata ttggctaatt tacgcccttc acgtttcaac
     8161 attaatcgtc catttacaat gagcatcgtt gctatcccta caacaaaaaa tggaataagt
     8221 aaaactaata aaagtaacac cgtccccata accgagacga gtagttcatt cccttttgaa
     8281 aaagtagcat aaaccaccga aagcacagaa aaaaatagtg ccattgtcaa aataatccca
     8341 ttgctaatac gtcgtctatc tataaacgac aagacaatga acagaagcag aaaaaaacct
     8401 gctaatagat agataaccaa tcttgttgcc cccttttaaa actaactgta tttccaatta
     8461 tacttgggcg gaggctattt cacaacataa aaagacctag acaacaaaat tgtctaggtc
     8521 tttattcaga tattattctg cagtatattt ttcaactaat tctacaactt cttctgctgt
     8581 agatttattt aaagcttctt ccgctaattt caccatttca gattgatcta aacgtttgat
     8641 taacgaacga gatttaagaa tgcttgaagc actcattgaa aattcatcta agcctaggcc
     8701 taaaagaagt ggtacagccg tttgatctcc agccatttct ccacacatac cagtccattt
     8761 gccctcttta tgagaagcat cgataaccat tttgactaaa cgtaaaatgg atggattgta
     8821 tggttggtaa aggtaagaaa cgcgttcatt catacggtct gcagccattg tatactgaat
     8881 taagtcattt gttccgatag agaagaaatc aacttctttc gcaaattgat cagcaagaac
     8941 agcagcagca ggaatttcaa tcataattcc aagttcgatg gaatcagata cttctgttcc
     9001 agcagctttt agttttgctt tctcatctag taaaatatca cgcgcttgac ggaattcatt
     9061 tactgttgca atcatcggga acataatttt taagttacca tatacacttg cgcgaagtaa
     9121 ggcgcgaagt tgtgtacgga ataattcttc attcgcaaaa caaagacgga ttgcacggaa
     9181 tcctaagaat gggttcattt cttcaggaag ttctaggtat ggtaatgttt tatcgccacc
     9241 gatatctaat gtacgaacaa ccacagattt tccgtccatt ccggaaacta ctgctttata
     9301 agcttcgaat tgctcttctt ctgttgggaa attgtcgcga cccatgtaca agaattctgt
     9361 acgataaagt ccaactgctt ccccaccgtt agaaataaca ccttctaaat cattcggagt
     9421 tccgatgttt gctgcaagct ccacgtgaac gccgtcttta gaaacggttt tttcattttt
     9481 aagtttatcc cattctgctt gttgtaaagc aaaatcagat ttaatttttt catagtgagc
     9541 gatttgttct tctgttgggt ggatgataac attaccttcc aaaccatcaa taataacaat
     9601 atcgtttttc gctacgctag cagtaacttc ttttgttcca actactgctg gaatttcaag
     9661 agaacgtgcc ataatagcgg agtgagaagt acgtccacca atatccgtta cgaaaccttt
     9721 aacaaagtta cggttaagtt gtgcggtatc ggaaggcgtt aaatcagctg caacaacaac
     9781 tacttcctca tcaattaaag ctggattagg aatagttaca cctagtaagt gagaaagaac
     9841 acgtttacgt acatctttaa tatccgctgc acgttcacgc atgtattcgt tgtccataga
     9901 ttcaaacata ccaataaaca tgtctgtcgt ttcttgtaaa gctgtttctg cattcgtttt
     9961 agaatttttg atactttctt caattggtcc tgttaattca ggatcattta acactagaag
    10021 atgcgcgtca aaaatttgtg ccttatcttc gcctaagtct ttagcagctt tctcacgaat
    10081 cattgaaagt tctgttctag aaacttctaa cgcgctttca aaacgcttta cttcactctc
    10141 aacatccgta acttctgttt tttcatagga aagatcaggt tcaacgagca gataagcttt
    10201 cgcaatggca atcccatcag atgctgcgat acctttcaac tctttagcca ttattcagcc
    10261 aatccttctt tcttaagaac ttcagttagt ccttcaattg cttctttttc atcgctacct
    10321 tcagtgtaga tagtaatgtc agcgccttta ccaataccaa gagacataac gcccatgatt
    10381 gatttaaggt ttactttttt gccagtgtat tcaatttgaa cgtcagagct gtatttactt
    10441 gcagcctgca ccaatagagt tgccgggcgt gcgtgaattc ctgtttcatc gattactaca
    10501 aaacttgctt gttccataat ttacattctc ctttgtaaag aaatttgttg taacctttta
    10561 agccgaaaaa acttcagcca aaaagactat ccctcaatta aaaagagtac catgttttac
    10621 ctattgttac aactatttga ttaaaaattt tttagaatgt ttttttgcag agcaccttat
    10681 ttcgctcttt ttaaatagaa aaaatagaac gtttttttaa atttatctct aaattgtttc
    10741 tgttttg
//
LOCUS       DASDYK010000096         9993 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.096, whole genome shotgun sequence.
ACCESSION   DASDYK010000096 DASDYK010000000
VERSION     DASDYK010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9993)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9993)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9993
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.096"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            60..1100
                     /locus_tag="U0308_002282"
     CDS             60..1100
                     /locus_tag="U0308_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HEM2317243.1"
                     /translation="MSKNQATAYIGTYTKAESQGIYRLVIDKTTGEIKENKLAGKMDN
                     PTYLKISDDEKFVYSVAKDGDKGGVAAFSVEEDGSLTFIGQDVQTGNPPCYVDASHDG
                     SIVVSANYHLGTIVSYPTENGALKPSVSTIQHTGKSVHERQEKPHAHFAGFTPDQKYV
                     ITCDLGTDKVTTYSATAGKLEKVTELDVKPGSGPRNLVFHPNAKYVYIMTELTSEVIF
                     AEYDEATGALNVIQTIASLPEGFDKENKGSAIHISPDGRFLYVSNRGQDAIVSYAVAE
                     NGTLTLAATTPVEGVGPRDFDLSYTGEILVATNENSNNVTVFGVNKETGALTLLQKDV
                     KVPEPVCIKFVK"
     gene            complement(1142..1837)
                     /locus_tag="U0308_002283"
     CDS             complement(1142..1837)
                     /locus_tag="U0308_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM2317244.1"
                     /translation="MATGKLNVYLVRHGKTMFNTSRRVQGWSDTPLTNEGIEVAEFLG
                     RGLRETPFDAIYTSDRGRTIETAGIILRESKQTHLEINELRDFREFGFGKFEGEYEDI
                     MFGKVMEHLGFQSMEEAFEKFGDDGYQIISETVEKIDETGMSENWDEMVARLKNALDT
                     VSAENQVENANVLVVSHGMAINTIISFFDKSLINPDLANASVTRLAFENGKWTIETVN
                     DLSYIEAGKLVLV"
     gene            complement(1838..2545)
                     /locus_tag="U0308_002284"
     CDS             complement(1838..2545)
                     /locus_tag="U0308_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM2317245.1"
                     /translation="MESSSRVVIYLTRHGKTILNTLDRVQGWADSPLTEEGALVAHDL
                     GRGLKGTNFVAAYASDRGRAIETARIVMKESDNYHLKLEKLAEMREFGFGKFEGEYNQ
                     AVLKMVAKAHGFESIESYYDKTSENNSNIVIDTVHKMDETGMTENSAIFEERLTAGLD
                     TILADANKRGGGDVLVVAHGMVIHRIIEMIDPSKNLRIIENASVTKVIFEDGAYSIEE
                     PGNMFYVEAGKKAQGGV"
     gene            complement(2674..4152)
                     /locus_tag="U0308_002285"
     CDS             complement(2674..4152)
                     /locus_tag="U0308_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HEM2317246.1"
                     /translation="MSTKKEKTFFGHPRGLATLFNTEFWERFSYYGMRALLLYYMYTA
                     VADGGLGFSQSTATAIMSIYGSLVFMSGVIGGWFADRVLGARQTIFYGGVLIMVGHIV
                     LALPNGGAAALFGSMAFIILGTGLLKPNVSNVVGDLYPAGDNRRDAGFSIFYMGINLG
                     AFIAPPIVSAVSDNAGSFHAGFGVAAVGMAIALVVYVLTGKRYLKDAGKKAPNPLQKS
                     EAKSLIFKIIGIVLGIGLLIAVLTLITGSLTIDTIILAVTVMGVGVPLAYFIMMMTSK
                     KTEADEKSRLTAYIPLFLIAVLFWMIEEQGSSTLALFAAERTDLSIWGMNLNPANFQS
                     LNPVFVITLSPIFAWIWTKLGDRQPSTPRKFALGLFFAGLSFVVMMLPGILHGNTTTL
                     VSPLWLVLSFFICIFGEMFISPVGLSATTKLAPKAFASQTMSLWFLSDAMGQSFNAQL
                     TQLFNADTEIAYFGITGFVAIAFAVALFIFAPFLKKYMKGVH"
     gene            complement(4242..5423)
                     /locus_tag="U0308_002286"
     CDS             complement(4242..5423)
                     /locus_tag="U0308_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEM2317247.1"
                     /translation="MQKEMLNFDYYNPTHIIFGKNRFNELNEVIPQDKKVLILYGGGS
                     VERFGTLDKVKTALKSREVGEFGGIEANPTYETLIKAIRLVKEENYDFLLAVGGGSVI
                     DGTKFVAAGALFDGEPMDIFGSGIGEKRPITKALPFGTVLTLPATGSEMNSGGVITFV
                     EKKAKLGFGSAYTYPVFSLLDPELTYTLPKRQLANGIMDAYVHVMEQYMTYPVGALLQ
                     DRYAESLLQTLIEIGPDVIKEDNHDYNTRATFMWSATNALNGTLSRGVPQDWASHSLG
                     HEITALYGIDHARTLAIVLPSLLNVRRSEKHEKLVQYAERVWGIKSGSDEEKIDAAIL
                     KTREFFESLGAGTRFSDYGLGEEVVDLLVDQLERHGLTNISERGDQTLEVSRQIYTNA
                     L"
     gene            5633..6268
                     /locus_tag="U0308_002287"
     CDS             5633..6268
                     /locus_tag="U0308_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEM2317248.1"
                     /translation="MLIKNLCIPKINLTTVPGDATLQEAIHLLEESGYRCVPVLDEKG
                     EKFLGNIYKMHIYKHAANGGSLSDPVMSLIKNATKHICVNASFFEVFFTIKELPYIAV
                     LNEQGNFYGILTHGKLLGLLQDGWNVKTTSYVLTIATGEVQGALTKITKIIDRYSSIS
                     SLITLDNQTEDFIRRVLVSLPVGVTEDKKNEIVSHLERKGLRVVETEKIEK"
     gene            complement(6325..7356)
                     /locus_tag="U0308_002288"
     CDS             complement(6325..7356)
                     /locus_tag="U0308_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF916 and DUF3324 domain-containing protein"
                     /protein_id="HEM2317249.1"
                     /translation="MKKICAIIFACVLAILCFPGQQAYATENSSFSVKAILPDNQASS
                     VTYFDLQMKPKQKQSLNVEITNQSKEEITVNCVANTAVTNEMGYVDYSIPNTKPDKTL
                     KYPFADMVKESVSEVTLKPNETKIWTAAIQMPAENYDGIILGGLHFQEKKEEDKEKDS
                     SENDVQIKNEYAYVIGVKLTEKTTVVKPELELNQIKPATRNYRNVVEMNLQNTKATLV
                     GGLAVDAKIYKKGSEKVLHESKRTDLSMAPNSNFNYSVDWENQELKPGKYKVHLVAKN
                     KEDKWEWTKEFTISSDQAKKANKVALGLEKDYTWMYIVGGVLLFILLIIATYFVGKRA
                     AKKKQENEK"
     gene            complement(7432..8274)
                     /locus_tag="U0308_002289"
     CDS             complement(7432..8274)
                     /locus_tag="U0308_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WxL domain-containing protein"
                     /protein_id="HEM2317250.1"
                     /translation="MTSRTVKVTTASLLALGLIVAPVLSGDFASAATSVTKDSKGIVK
                     FDKSTTPDPDPVNPDPVDPDPVIPDPTDPPVGTDGLWILAVSDWDFGTHNVSSLSSGA
                     LNVHAADDTISTYVDANGNGQQDLPGEVSVTKKVTPYAQISDVRGTNTGWTLSVTGSA
                     FKDSSTPAKTIPGAELTIPKSTVSSATSTAQAPTGYDSVTISMTGGAAVPVMAAKDMQ
                     TATPTNFNDDQGMGTWTDSFGSQAVSATDTSKPKLSIPKNVVVADGTYQSTLTWTLSD
                     TPAV"
     gene            complement(8318..8614)
                     /locus_tag="U0308_002290"
     CDS             complement(8318..8614)
                     /locus_tag="U0308_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2317251.1"
                     /translation="MKKMGFILICCLFVCASPFYVKANTDKATSKAGVIFTHDPRKPR
                     TGTDDRSGTFPTKVPPKRLPKTGDTTDFYLVLLGFGFILIAKKGYFKEVREEIR"
     gene            complement(8654..>9993)
                     /locus_tag="U0308_002291"
     CDS             complement(8654..>9993)
                     /locus_tag="U0308_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LapB repeat-containing protein"
                     /protein_id="HEM2317252.1"
                     /translation="ADFASTKIKVFDLDDNHITDLSSLTNNKMPNLQRLYVRSQSFYV
                     ETPVVTSSKYEFSLQPSVFGITKPVKITATNPKATIDPITSKITYSAEVMAKRPKYSS
                     NRVSGVTYSWDEDIPFNGSNNLVEYNGTFYKPLTYVEPPQVVSYNSGLTYELGTPLTE
                     QQFLNDLNVITDQPTTITTNFDKVLKDVNSVGFYPVTIKASNIEGNTEFTTSVLIKYK
                     PPVITADAEYTYLVGDKVNATQFRADVNATLTGEGTLRDDFIYKVRLNTAGDYVVTLS
                     SPKSGYYEQDAIPITVIVHVKELLELQIPDEFRMDIDANADSVPISDKKQTLTCYGSS
                     GKAELEVIDRRTVRQGWTITGAMTPFTNSGGDILQTSLKYQSKSPSSSPIYLNTTNQP
                     IEKKQSAVTDPKYDSTIVNLEDSLSMEIEPNDALVNDSYESKITWTLEDAPRP"
BASE COUNT         2981 a         2096 c         1741 g         3175 t
ORIGIN      
        1 tcttttcttt actatgctat aattaactag gaaatatctt atatatagga ggaattggca
       61 tgtcaaaaaa tcaagcaact gcttatatcg gtacatatac caaagccgag agccaaggta
      121 tctatcgctt agtaatcgac aaaactaccg gcgaaatcaa agaaaataaa ttagctggga
      181 aaatggacaa tccaacatat cttaaaattt cagatgacga aaaattcgtt tattctgtag
      241 caaaagatgg cgataaaggt ggggttgcag ctttttctgt ggaagaagac ggttcgctta
      301 ctttcatcgg tcaagatgtt caaacaggta acccaccatg ttacgtagat gcctctcatg
      361 acggttctat cgttgtatct gcaaactatc acttaggcac aatcgtaagc tatccaacag
      421 aaaatggtgc attaaagcct tctgtttcta ccattcaaca tactggtaaa agtgttcacg
      481 aacgccaaga aaaaccacac gcgcactttg caggattcac accagaccaa aaatacgtta
      541 tcacatgtga ccttggaaca gacaaagtaa cgacttattc cgctactgct ggcaaacttg
      601 aaaaagtaac tgagctagac gtaaaacctg gaagcggtcc tcgtaaccta gtcttccatc
      661 caaatgctaa atatgtgtac atcatgacag aattaacttc cgaagttatt tttgctgaat
      721 atgatgaagc tactggcgca ttaaacgtga ttcaaacaat cgcttctctt ccagaaggtt
      781 ttgacaaaga aaataaaggt agcgctatcc atatttctcc tgatggtcgt ttcctatatg
      841 tgtcaaatcg tggccaagat gccatcgtta gttatgcagt tgccgaaaac ggcacactaa
      901 cacttgcagc aacaacacca gtagaaggcg taggtccacg tgacttcgac ctgagctaca
      961 ctggcgaaat cttagttgca acaaacgaaa acagcaataa cgttactgtt tttggtgtta
     1021 acaaagaaac tggtgcactt acattacttc aaaaagatgt aaaagttcct gaaccagttt
     1081 gtattaaatt cgtaaaataa cttaaaaaat ccagaatggc ctcagtgcca ttctggattt
     1141 tttatactaa aactaattta cctgcttcaa tgtaacttaa atcattcact gtctcaattg
     1201 tccatttgcc attttcaaat gcaagtcttg taacacttgc attagctaag tctggattaa
     1261 ttaatgactt atcaaagaaa gaaataatcg tattaatagc cattccgtga gaaacaacta
     1321 aaacgttggc attttccacc tgattttctg cactaactgt atctaaagca ttttttaatc
     1381 tagcaaccat ctcatcccaa ttctcggaca taccagtttc atcaattttt tctacagttt
     1441 ccgagataat ttgataacca tcatcgccaa atttttcaaa agcttcttcc atcgactgga
     1501 aaccaagatg ctccatcact tttccaaaca taatatcttc atactcacct tcaaatttac
     1561 caaaaccaaa ctcacggaaa tcacgtagtt cattgatttc caaatgcgtc tgcttgcttt
     1621 cacgtaaaat gatgcctgcc gtttcaattg ttcgaccacg atcactcgta taaatagcat
     1681 caaagggagt ttcacgaagg ccacgaccta aaaattctgc cacttcgatt ccttcatttg
     1741 ttaatggtgt atctgaccag ccttgcacac gacgagatgt attgaacatc gttttgccat
     1801 gcctaactaa gtacacattc agttttcctg ttgccactta aactccccct tgcgcctttt
     1861 ttccagcttc tacataaaac atgtttccag gttcttcaat cgaatatgct ccatcttcaa
     1921 aaataacttt tgtcacactg gcattttcga taattcgtaa atttttacta ggatcaatca
     1981 tttcaataat gcgatgaata accataccgt gcgctactac taacacatct ccaccaccac
     2041 gcttattagc atcggcaaga atagtatcga gtcccgcagt tagtctttct tcaaaaatag
     2101 ccgagttttc cgtcattcca gtctcatcca ttttgtgcac cgtatcaatg acaatattgg
     2161 aattattttc agaagtttta tcataatagc tttcaataga ttcaaaacca tgcgcctttg
     2221 ctaccatttt taaaacagct tgattatatt ccccttcaaa tttgccaaag ccaaattcac
     2281 gcatttcagc taatttttct agttttaaat gatagttatc gctttctttc attacaattc
     2341 gtgcagtttc gatggcacgt cctcggtcac ttgcgtaagc ggctacaaaa ttagtccctt
     2401 ttaagccacg acccaaatca tgcgcaacaa gtgctccttc ttcagtaagc ggtgagtccg
     2461 cccagccctg cacccgatca agtgtgttta aaatcgtctt tccatgtcgc gttaaataaa
     2521 taactaccct gcttgatgat tccatgtata cactccttta aattatcact tctcccttta
     2581 atagtagcaa tcttaggagt taatggcaaa ctaatttatt cctagcataa aaaaacactt
     2641 cctccaaata aggagaaagt gcgcttaatt cctttaatga acgcccttca tatatttttt
     2701 caagaatggc gcgaaaatga ataatgctac cgcaaaagca attgctacaa aaccagtaat
     2761 accgaaataa gcaatttcag tgtcagcatt aaataattgt gttaattgtg cgttaaatga
     2821 ttgccccatt gcatctgaca agaaccataa gctcatcgtt tgtgaagcaa aagcttttgg
     2881 cgctagtttg gtagtcgcag ataatccgac tggtgagata aacatttcac cgaaaataca
     2941 gatgaagaaa cttagtacta accaaagcgg acttacaagc gttgttgtgt ttccgtgcaa
     3001 gatacccgga agcatcataa caacgaaaga taaaccagcg aagaatagtc caagggcaaa
     3061 tttacgtggt gtagatggtt gtctatcacc aagtttcgtc caaatccatg cgaaaattgg
     3121 cgaaagtgta ataacaaaca ctgggttaag cgactggaaa ttggctggat ttaagttcat
     3181 accccaaata gataaatccg ttctttctgc cgcgaaaagc gccaatgtgg acgagccttg
     3241 ttcttcaatc atccaaaata gtacagcaat taaaaataac ggtatgtatg cagttaatcg
     3301 tgatttttcg tccgcctcgg ttttcttgct agtcatcatc ataataaagt aagcgagtgg
     3361 aacccccacg cccatcaccg ttacagcaag gataatcgta tcaattgtta agctacctgt
     3421 aattagtgtt aaaacagcaa ttaataatcc tatgcctaaa acaatgccaa ttattttgaa
     3481 tataagactt tttgcttctg atttttgaag cggatttggc gcttttttgc cagcgtcttt
     3541 taagtaacgt tttcctgtaa gaacataaac aacaagtgca attgccatac caacagctgc
     3601 cacaccaaaa ccagcatgga aacttccagc attatcagaa actgccgaaa caataggcgg
     3661 ggcaataaat gcacctaagt taatccccat gtagaagata ctaaaaccag catcacgacg
     3721 attatcgcca gctgggtata aatcgccaac gacattagaa acattcggtt taagtagccc
     3781 agttccgaga attataaatg ccatcgaacc aaataatgcc gctgctcctc catttggtaa
     3841 agctagtaca atatgcccca ccataataag gactccaccg taaaaaatgg tctgtcgtgc
     3901 ccccaagaca cggtcagcga accatccacc aatgactcct gacataaata ctagtgaacc
     3961 ataaatagac ataattgctg ttgcggtaga ctggctaaac ccaagtccac catctgctac
     4021 tgcagtatac atataataaa gtaataatgc acgcattccg taataggaga atcgctccca
     4081 aaattcggtg ttaaataatg tagctaggcc gcgcggatgg ccgaaaaacg tcttttcctt
     4141 cttggtactc aagaaatttc gccctctttc attttctatt gatttttatt taagtaagca
     4201 aatttcttct ctaatgattt gcgcaaaagt ttcgttatcc attataaagc atttgtataa
     4261 atttgacgag atacttctag cgtttggtcg ccgcgttctg aaatattcgt taaaccgtga
     4321 cgctctaatt gatcaacgag taagtccact acttcctcgc caagcccata atcactaaat
     4381 ctagttcctg ctcctaagct ttcaaagaac tcgcgtgttt tgagaatagc agcgtctatt
     4441 ttttcttcat cactaccact cttaatcccc cacactcgtt ccgcatattg cactaatttc
     4501 tcatgctttt cactgcgacg aacatttaaa agagacggga gaactattgc taacgtacgt
     4561 gcatggtcaa tcccataaag tgcggtgatt tcgtgaccta aactgtggct tgcccaatct
     4621 tgcggaacgc ctctggataa tgttccattg agtgcatttg tagctgacca cataaaagta
     4681 gcacgtgtat tataatcatg attatcttct ttgataacat ctggaccaat ttcgattaaa
     4741 gtttgtagta gactttcggc ataacgatct tgcagcaaag cacctactgg ataagtcata
     4801 tattgttcca ttacatgcac atacgcgtcc ataataccat ttgcaagttg acgttttgga
     4861 agtgtgtatg taagttctgg atcaagtaaa gaaaaaacag gataagtata agcactacca
     4921 aagccaagtt tcgctttctt ctccacaaaa gtgattacac caccgctatt catttcagaa
     4981 ccagttgcag gaagtgttag tactgttcca aaaggaagcg cttttgtaat cggacgtttt
     5041 tcgccaattc cgctaccaaa aatatccatc ggttcaccgt cgaacaatgc tcccgctgca
     5101 acgaattttg ttccgtcaat cactgaccct ccaccgactg caagtaaaaa gtcatagttt
     5161 tcttctttaa ctagtcggat agctttaatt aacgtttcgt atgtaggatt cgcttcaatg
     5221 ccaccaaatt cgcctacttc gcgtgattta agagcggttt ttactttatc taaagttcca
     5281 aaacgttcta cacttccacc accatacaaa atcaatactt ttttatcttg aggaatcact
     5341 tcatttaatt cattaaaacg gtttttacca aaaataatat gagtagggtt ataataatca
     5401 aagttcaaca tttctttttg catgttaacg tccttctttc tgtttataaa tttacatagc
     5461 atagttaata atacactttt tttagaaaat ttaaacctta tgccaaaagt ttccatttat
     5521 ataagtaaat tatcgtattt tttccgaatt atcccacctg ataatagtga ttttctatac
     5581 aaaagtccta ctttacgtta aaatgaaagg gaagaagaat ggagtgaaga acatgttgat
     5641 aaaaaacctt tgtatcccta aaataaattt aacaaccgtc cctggagatg caactttaca
     5701 agaggctatc catttacttg aagaatctgg ttatcgctgt gttcctgtat tagatgaaaa
     5761 aggtgaaaaa ttcttaggta atatttataa aatgcatatt tacaaacacg cagctaacgg
     5821 tggtagtctt agcgacccag taatgagctt aattaaaaat gcgacgaagc atatttgcgt
     5881 caatgcatct ttctttgaag tcttttttac aatcaaagag cttccatata ttgcggtttt
     5941 aaatgagcaa ggtaactttt atggaatttt aacgcacgga aaattacttg gtttactcca
     6001 agatggctgg aatgtgaaaa caactagcta tgttcttacg attgcgactg gcgaagttca
     6061 aggggcctta actaaaatca ctaaaattat cgatcgctat tcgagcatct caagcttgat
     6121 cactttagac aatcaaacgg aagatttcat tcgccgcgta cttgtttcct taccagttgg
     6181 cgtaacagaa gataagaaaa acgaaattgt ttcccactta gaacgcaaag gacttcgtgt
     6241 cgtagaaaca gaaaaaatcg aaaaataata aaaacagctt gaaaacgagg taaattctca
     6301 ttttcaagct gttttttcgt taggctattt ttcattttcc tgttttttct ttgctgctcg
     6361 tttgccgaca aagtaagttg cgataataag aagaatgaaa agcaatactc cacctacgat
     6421 atacatccac gtgtagtctt tctccagtcc aagagctact ttattggctt tttttgcttg
     6481 atcagaagag atagtgaatt cttttgtcca ctcccattta tcttctttgt tcttagcaac
     6541 taaatgcact ttatatttac ctggttttaa ctcttgattt tcccaatcta cactataatt
     6601 aaaattggaa tttggcgcca tggataaatc tgtgcgtttt gattcatgta aaactttttc
     6661 gctgcctttc ttatatattt ttgcatccac ggccagtcca ccaactaagg tcgcttttgt
     6721 attttgcaaa ttcatttcta ctacatttcg gtaatttctg gtcgctggtt taatttgatt
     6781 taattctaat tctggcttta cgacggtcgt tttttcggtt aatttgacac caatgacgta
     6841 ggcgtattca tttttaattt ggacatcgtt ttcgctggag tctttttctt tatcctcctc
     6901 tttcttttct tgaaaatgta atcctcctaa aataataccg tcgtagtttt cagcgggcat
     6961 ttgaatagcc gctgtccaaa ttttggtttc gtttggctta agtgtaacct cagagacact
     7021 ttccttcacc atatctgcaa aggggtattt taacgtttta tctggtttcg tatttggtat
     7081 ggaataatcc acgtagccca tctcattggt aacggctgta ttggcaacgc aattaacggt
     7141 gatttcttct ttactctggt tcgtaatttc tacatttaaa ctttgttttt gctttggttt
     7201 catttgtaaa tcgaaatagg tcacactaga tgcctgattg tcagggagaa ttgcttttac
     7261 ggaaaaacta ctattttctg ttgcgtacgc ctgctgtcct ggaaaacaaa gaatagctag
     7321 tacacaagca aagatgatag cgcatatttt tttcaagtgt ctctttcctc ctaattgctc
     7381 aatgtaaaaa gagaaaacaa catccaaaaa tgaagttttc tcttaaaaat gttaaactgc
     7441 tggtgtatcg cttaaagtcc aagttaatgt actttgataa gttccatcag cgacaacgac
     7501 gtttttcgga atggataatt ttggtttgga agtatctgtt gcggacactg cttgagaacc
     7561 aaagctatct gtccatgtgc ccatcccctg gtcatcgtta aagttggtcg gtgtagctgt
     7621 ttgcatatct ttagctgcca ttactggaac tgctgcgccg ccagtcattg aaattgttac
     7681 gctatcatat ccagttggcg cttgagcggt agaagtcgct gaactaacag tcgatttggg
     7741 aatagttagc tctgcacctg gaatcgtttt tgctggtgta gaagaatctt tgaaagcact
     7801 acccgtcacg gaaagtgtcc aacctgtatt agtaccacga acatcactaa tttgtgcata
     7861 aggagttact ttcttagtta ctgaaacttc ccctggcaaa tcttgttgtc cattaccatt
     7921 tgcgtctaca taagtagaaa tcgtatcatc cgctgcatgt acatttaacg cacctgaaga
     7981 taagctagaa acgttatgcg taccaaaatc ccagtcagat acggctaaaa tccaaagtcc
     8041 gtctgtacct acgggtggat cagttggatc cggaataact gggtctggat caactggatc
     8101 tggatttact ggatccggat ctggcgtggt gcttttatca aattttacaa tccctttgga
     8161 atctttcgtt acggaagtgg cagctgaagc aaaatctcca gaaagtactg gtgccacaat
     8221 caaacctaat gctaataaac tcgctgttgt tacttttact gttctacttg tcattattat
     8281 tctcctcttt ctgatatcct ttttttgtcg tgcagtttca ccggatttct tccctcacct
     8341 ccttaaaata gccttttttc gcgattaaaa tgaaaccaaa ccctagtaaa acaagataaa
     8401 aatcagttgt atctcctgtt ttcggcagtc tttttggagg aactttggtc ggaaaagtgc
     8461 cgcttctgtc atctgttcca gttcttggtt ttcgggggtc atgcgtgaaa atcactcccg
     8521 ctttacttgt cgccttatcc gtattcgctt ttacataaaa cggcgaggcg cacacaaata
     8581 aacaacagat taaaatgaat cccatttttt tcaatttaga tagctccttt tgtttgatgt
     8641 agctgattgc ttattatggt cgaggcgcat cttctagtgt ccaggtgatt ttcgactcat
     8701 aggaatcgtt cactagcgca tcatttggct caatttccat ggataaactg tcttccagat
     8761 tgacgatggt agaatcatat tttgggtctg tcacagctga ttgtttcttt tcgataggtt
     8821 gattcgtcgt atttaaataa atcggactac tggaaggcga tttgctttga tattttagcg
     8881 aagtttgtag tatatcgccg ccgctattgg taaatggcgt catcgcaccc gttatcgtcc
     8941 agccttgccg cacagttcgt ctatcgatca cctctaactc agcctttcca gacgaaccat
     9001 agcatgtaag tgtttgtttc ttatctgaaa ttggtacgga atctgcattt gcatctatat
     9061 ccattcgaaa ttcatctggg atttgcaatt ccaaaagttc ttttacgtga acaatgactg
     9121 taataggtat tgcatcttgc tcatagtagc cacttttagg tgaagaaaga gttacaacat
     9181 aatctcccgc cgtattaagt cttactttat atataaagtc atctcttagt gttccttcac
     9241 ctgtcaaagt tgcatttaca tctgctcgaa attgagtagc attcacttta tctcctacta
     9301 aataggtgta ttctgcatct gcggttataa ctggtggctt atacttaatc agtaccgaag
     9361 tagtgaactc cgtatttcct tctatgttag aagctttgat agtgacaggg taaaagccta
     9421 cagaattcac atcttttagc accttatcaa aatttgtagt aatcgttgtt ggttgatctg
     9481 ttatcacatt gagatcgttt agaaattgtt gttccgtaag tggtgtacct agctcataag
     9541 taaggcctga attgtaagac acaacttggg gcggttcaac ataagttaat ggcttgtaaa
     9601 acgtaccatt gtattcaact agattattgc taccattaaa cggaatgtcc tcgtcccacg
     9661 aataggtaac tcctgaaacc cgattagagc tatacttcgg tcttttggcc attacttctg
     9721 ctgaatatgt aattttagaa gtaataggat caatagttgc tttgggatta gtagcagtta
     9781 ttttaaccgg cttggttatt ccaaaaacag atggttgtaa agaaaattca tacttactag
     9841 aagtaactac cggcgtttcc acatagaaac tttggctcct aacatataat cgctgtaaat
     9901 taggcatttt gttatttgta agactagata aatcagtaat atgattatca tccaaatcaa
     9961 acacctttat tttagtactg gcaaaatcag caa
//
LOCUS       DASDYK010000097         9958 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.097, whole genome shotgun sequence.
ACCESSION   DASDYK010000097 DASDYK010000000
VERSION     DASDYK010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9958)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9958)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9958
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.097"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            79..3261
                     /locus_tag="U0308_002292"
     CDS             79..3261
                     /locus_tag="U0308_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014930599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate-binding protein"
                     /protein_id="HEM2317253.1"
                     /translation="MDGEYHSPYGDDDLYTVQPTERSPRDPKAGEDVTLNITTWPIED
                     GQNVWVEWTKNGVAQENVTAAYDYNSGNNTYWKADLGKFEKGDEITYTTKGSTDGGTA
                     YESGPFTFYVTDWEYVQDVSSVVDNGDSITLNMTATAGEFTPKLYLSFEDLDTLRMEL
                     SPTGKETGHAGKTGYTVDDGADKVTVTTEDLRVEIQKSPYRMEVYQADGTLLTSEYTT
                     ANSLGWLTDGKNVINQYQNNFMTPSDEAFYGFGERYDTINQRGKDVETYVYNEYQDQA
                     QTERTYLAVPFFVSANKYGMYVNSDFHSQFQMASKVEDKYSFVLDNDGDMTNMLDYYV
                     ISGKDQNDIVNNYTDITGKTTLLPKWAFGLWMSANEWDRESDVSSALSNAKANDIPAT
                     GFVLEQWSDEETYYIWNNATYTAKKNGEAFSYDDFTFNGKWTDPKAMVDSVHDAGMNI
                     VLWQVPVLKDDGTVYEQRDNDEAYMISQGYSADDGTGAPYRVPASQWFGNGILLDFTN
                     KDAVDWWTSQREYLLTEVGIDGFKTDGGEMVWGRDTTFSNGEKGQEMRNRYPTDYVSS
                     YFDFAKSINPEAVSFSRSGTSGAQKSGIYWSGDQTSTFDSFQASLKAGLSASTSGVSY
                     WAWDMAGFTGDYPTAELYKRATAMAAFAPIMQFHSEKSDPSPSEERSPWNAVARTGDE
                     TILPTFQKYLYTRMNLLPYIYTAAKDTADNGKSMMRQMAMDYPEDINARDLDEQYMFG
                     DDLLVAPIVQEGQTEKEVYLPEGEWVDLWNGGIHPGGETISYYADVDTLPVFAKAGAI
                     IPMNMTDGYQLGQNVGNDLKSYDNLTFRVYPSGDSEYSFYDDVNGGEMRDISVSEDFA
                     NEKVSVDLPAMADETTMQVFSTEPTSVTIDGADVAKADTLDAFNEATTGYYYDTVQNL
                     TYVKAAAKDAKQAIVLNGVNHAPYEAEFAHLTNVSTASDHAGYTGTGFVAGFDAEKEA
                     VEFDVDAVDGASDYTMEVRYSAGVEDATRTVYINGKKQQITLPKTADWDTWSTIEVPV
                     TLQAGNNQVVFDFEADDTAGINFDHVVFKK"
     gene            3322..4266
                     /locus_tag="U0308_002293"
     CDS             3322..4266
                     /locus_tag="U0308_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003732478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo2445 family class 3 internalin"
                     /protein_id="HEM2317254.1"
                     /translation="MKKIIGLAFIAFCCILFAPTIKAQADTVPLPAPIIEAFPVEAIA
                     EAIAGELDKDSVNDTITQADLDTMTLIPLPSLGLTGEDLSVLNNEVFTNAIELAIWSN
                     NIGELPDLSDALPALENIEANGANITLFPDANYPNLTNVDLSQNNFGFNIPKFVGMEG
                     LVSINMEDAGLSGYVAEDIWMNMPNLDSLLLNENHLISIPEDIFLSEQLSTHSFANQT
                     ATYPHTTIKQGENLEVFVPFIYQALDFIAPSRHDLIIIKDNGRTLYEPPYPTYDGSYM
                     YKIETAGLQPGEHLLEISLGYNSGEYTGWYDFPVTITE"
     gene            4281..8213
                     /locus_tag="U0308_002294"
     CDS             4281..8213
                     /locus_tag="U0308_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5110 domain-containing protein"
                     /protein_id="HEM2317255.1"
                     /translation="MKKGMKQVCVSMAVVPLVWLNLGITQPLQVEVKAEETKEKEVKK
                     EANTGAAKQLSKEEYAKLSAEEGLGNVLEATVTDNVITLKIDNGDEAEDDYLEISPLA
                     NNLLKVNLRPRNIENSPSTPMIDPNATFTAIGATIDLESDPMIISTDECTLEIAKEPA
                     RMTFKDKNGKTLLSESADGGIFDGGVRFKRGASDHVYGAYGISFSDGDLGMERDNTAA
                     DSNKTAQAGQQGNAGGPFMWSTAGYGLLVDSDGGYPYSVSDEEKLEFYYGDTVVEGRR
                     YVKENVEMYLMSGEPEEIMSSYADVTGHTPMMPKWSLGFSNFEWGTNETEFRENINTY
                     RAKGIPIDSFAFDYDWKFYGDPTYGGDYGEFAWNTENFPSAKDTTLKSDMDALGVKMI
                     GITKPRVVTNLEDGTATQQGKDAEANGYWYPGQSAYEDYAFPVTVRSIDPYNEDERNW
                     WWSHSEDALDKGIVGWWNDETDKVSSNGADYWFGNFTTGFTSEAMYEGQRDYTNERVW
                     QTGRTFYPGAQRYSTSTWSGDIGVQWKKGEVIDWANGMQEQPSTMLSTINLGQTKWGM
                     DTGGFNANSGQVLNPDPELYSRWMEFSSLVPVFRTHGNQNQQRQPWFYGGTAEEVAKS
                     SMTWRYSMIPYMYAYERQAYDSGVGLVQPLTFDNPTDENVVNLTDEWMFGDGLLVAPV
                     LEEGAGSRDIYLPAGTWIDYNRGDVYEGNQTISYEVNDDDWTDVPMFVKQGAIMPMQQ
                     PQNYVGESAVKTIYLDTFASDKETSFTHYDDDGKSFDYEKDTYLKQKMTTSKTADTST
                     FTIGAKEGSYKADTENYIVKLHGNAAESVQVNGADSKVYDDLSALETADGSGYAVGSD
                     VYGAVTYVKVPAQADADTVITTSGSASVVQTGTYEMETGSNFADTVADKPVAEKTYVD
                     GYDKDGAGTTIYANVKDSGDYNVDLTYKNASADNQSLSIFVNGDYVKQTTLKPNTDWS
                     VQSEALPLSAGKNSISYKVVTDTGDKADQVSLDKVNIGFTPTVAKVEAEEADLAGTLK
                     VANDHWFYSGEGFVGGFGAAGDEIKFEVDVPADGEYVLNTRTANGTGMPQTLDLYTNG
                     DYNSRVTFPSEGENWNIWSDTEKAVNLKAGTNKITFLRDGETTGNVNIDRILVSAEPI
                     NSPVQSEVNLLDNGGFERDAAATTNWVESHPDGQDKAYGVDSGSGVNPPESPAFGKQS
                     AYFYLPGAYKQTLAQQIAVPVNNANYDVEAWVKVSNDDAAKAQMTVNNYDSSDGKTID
                     LVADDVWHYVTMKDVKVTTGNINTSFQMDSPGGTSIHIDNVRVMPSAE"
     gene            8264..9229
                     /locus_tag="U0308_002295"
     CDS             8264..9229
                     /locus_tag="U0308_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317256.1"
                     /translation="MKNLFRLFLVFSIVIIGVVSFQAIDASANETDVITQDDVDAVTS
                     LGLGYFTNYLTDEDLQMLGNAYFTNVNNIMIYPTQTMFTGFPDLPTLPKLDTLRAEGN
                     LSSEVLPENITVPDYQNYPELKYLDLSNRTIVGGLPNFSNIPKLETLLMSSCGLASED
                     VPDFTNLKNLQKVNFQTNQYRTEMTDFTYLDSLVSMDLSYNYLNVLPPTIVDKVIVLG
                     QIGTLPDQNVVFGEDTNITLPVYTQLDDLGRISGFQEVWIRDSNEKEIYNVAKVDYDE
                     VTKQIIVPTNNLDKGEYTIGIDFNGIEPYIEEGEVMNYSVKITIN"
     gene            9345..9714
                     /gene="ssrA"
                     /locus_tag="U0308_002296"
     tmRNA           9345..9714
                     /gene="ssrA"
                     /locus_tag="U0308_002296"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
BASE COUNT         3305 a         1678 c         2232 g         2743 t
ORIGIN      
        1 aagaaatcta gtttaatttt cattttgacc atactaatat ttagttgttt aagtggattt
       61 gggacaaacg ttttcgcgat ggatggtgaa tatcactcac catatggaga tgatgattta
      121 tatactgtcc aaccaacaga acgttctcct agagatccca aagctggtga agatgtgaca
      181 ttaaatatta ctacctggcc aattgaagat ggacaaaatg tttgggtaga atggactaaa
      241 aacggggtag cacaagagaa tgttacagca gcttatgatt ataatagcgg gaacaatact
      301 tactggaaag cagatttagg aaaatttgaa aaaggcgatg aaatcactta tacaacaaaa
      361 ggctctactg acggaggaac tgcttatgaa agtggtccgt ttacatttta cgtgacagac
      421 tgggagtatg tgcaagatgt tagtagcgtt gtagataatg gggattctat tacattaaat
      481 atgacagcca ctgcaggtga attcactcca aaattatatc tttcatttga ggatttagat
      541 acgcttcgta tggagctatc accaaccggt aaagaaactg gacatgctgg aaaaactggt
      601 tacacagtag atgatggtgc agataaagta acagttacaa cggaggattt acgagtagaa
      661 attcaaaaat ctccttaccg catggaagtg taccaagcag acggaacttt acttacaagc
      721 gaatatacaa ctgccaacag cttaggttgg ttaacagatg gaaaaaatgt catcaatcaa
      781 tatcaaaata actttatgac accaagcgac gaagcatttt atggttttgg tgaacgttat
      841 gacacgatta accaacgagg aaaagatgta gagacatacg tatacaatga gtatcaagat
      901 caagcgcaga cagaaagaac ctatttagcg gtaccatttt ttgtaagtgc taataaatac
      961 gggatgtatg tcaattctga tttccattca cagttccaaa tggcttctaa agtagaagat
     1021 aaatatagct ttgtattgga caatgatggc gatatgacga atatgcttga ttactatgtt
     1081 attagcggga aagatcaaaa tgatatcgta aataactaca cggatataac agggaaaacg
     1141 actttgctac caaaatgggc ttttggactt tggatgtcag caaacgagtg ggatagagaa
     1201 tccgatgtaa gctctgcact ttctaatgca aaagcaaatg atattccagc aacaggtttt
     1261 gtattagaac aatggagtga tgaagaaact tactatattt ggaacaatgc gacctataca
     1321 gcaaagaaaa acggggaagc atttagctat gacgatttta ctttcaacgg gaaatggact
     1381 gatcctaaag ctatggtgga tagtgtccat gatgcaggta tgaatatcgt tttatggcaa
     1441 gttccagtat taaaagatga cggtacagta tatgaacaaa gagataatga tgaagcatac
     1501 atgataagcc aagggtatag tgcggacgat ggaacagggg ctccttaccg agttccggca
     1561 tctcagtggt ttggaaatgg gatattacta gatttcacta ataaagatgc tgtagattgg
     1621 tggacgtccc agcgtgagta tttattaaca gaagtaggta ttgacggatt taagacagat
     1681 ggtggagaaa tggtgtgggg acgtgataca actttctcta acggcgaaaa aggacaagaa
     1741 atgagaaacc gttatccaac tgactacgtt tcaagttatt ttgattttgc gaaaagtatt
     1801 aatccagaag cagtttcgtt tagtcgttca ggaacttctg gagcacaaaa atctggtatt
     1861 tactggtcag gagatcaaac ttccacattt gactctttcc aagcttcatt aaaagctgga
     1921 cttagtgctt caacttcagg tgtttcttac tgggcgtggg atatggctgg atttacggga
     1981 gactatccaa cagcagaact atataaacgc gcaactgcga tggcagcttt tgcaccgatt
     2041 atgcaattcc attcggaaaa atcagatcca tcgccaagtg aagaacgttc accttggaat
     2101 gcagtagcca gaacaggcga cgaaacaatt ttaccgacat tccaaaaata tctatacaca
     2161 cgaatgaatt tacttccata tatttataca gcggcaaaag atacggcgga taatggtaaa
     2221 tcgatgatgc gccaaatggc catggattat ccggaagata tcaatgcgcg tgatctagat
     2281 gaacagtata tgttcggtga cgatttactt gtagcgccaa tcgttcaaga aggtcaaaca
     2341 gaaaaagaag tttatctacc agaaggcgaa tgggttgatc tttggaacgg cggaattcat
     2401 ccaggtggcg aaaccatttc gtattatgca gatgtagata cgcttcctgt atttgcaaaa
     2461 gctggagcga ttattccgat gaatatgaca gatggctacc aacttggcca aaatgtcgga
     2521 aacgatttaa aatcctatga taatttaaca ttccgagttt atccatctgg agatagcgaa
     2581 tatagtttct atgatgatgt aaacggcgga gaaatgcgtg acatcagtgt ttctgaagac
     2641 tttgcaaatg aaaaagtttc cgtagatctt ccagcaatgg cggatgaaac aacgatgcaa
     2701 gttttcagta cagaacctac aagtgtaacg attgacgggg cagatgtagc taaagcggat
     2761 acgctagatg catttaacga agcaacgaca ggttactact atgatacagt acaaaactta
     2821 acatatgtaa aagcagcggc aaaagatgcc aaacaagcaa tcgtattaaa cggtgtaaat
     2881 catgcaccat acgaagcgga atttgctcat ctgacaaatg taagtactgc aagtgatcac
     2941 gcgggatata ctggtactgg ttttgtagcc ggctttgatg cagaaaaaga agcggtagag
     3001 tttgatgtag acgcagtgga tggtgcttct gattatacaa tggaagttcg ttatagtgct
     3061 ggcgtagaag atgcaactag aaccgtatat atcaacggta aaaaacaaca aattacttta
     3121 ccgaaaacgg ctgattggga tacttggagc acgatagaag ttccagtaac cttgcaagct
     3181 ggtaataacc aagttgtatt tgattttgaa gcagatgata cagcgggaat aaattttgac
     3241 catgtagtat ttaagaaata aatccaataa gccacccttt tatggataga gagggtggct
     3301 atgttgaaag gattgaactg aatgaaaaaa ataattgggc tagcatttat agctttttgt
     3361 tgcatattat ttgcaccaac tataaaagca caagcggata cagttccctt accagcgcct
     3421 attattgagg cttttcctgt ggaagcgata gcggaggcga ttgcgggaga actagataaa
     3481 gattctgtaa atgacacgat tacgcaagca gatttggata caatgactct tattcctttg
     3541 ccctcattgg gtttaacggg ggaagactta agcgtactaa acaatgaagt atttacaaac
     3601 gcgattgaat tagcgatttg gagtaataat attggagaac tgcctgattt atctgatgcg
     3661 cttcctgctt tagaaaatat tgaagcaaat ggggctaata ttactctttt tccagatgca
     3721 aactatccta acttaaccaa tgttgatttg agtcaaaata attttggctt taatattcca
     3781 aaatttgttg gaatggaagg actagtaagt attaatatgg aggatgctgg actttctggt
     3841 tatgtagcgg aagatatttg gatgaatatg cctaacttag attcactact tcttaatgag
     3901 aatcatttaa tttctattcc ggaagatatc tttctatcag aacaattaag tacacattca
     3961 tttgctaacc agacagcaac ttatcctcac acaacgatta aacaaggaga gaacttggaa
     4021 gtttttgttc cttttattta ccaagcatta gattttatcg caccaagcag acacgattta
     4081 attattatta aggacaatgg gagaacgctt tatgaaccac cttatccgac ctatgatggt
     4141 tcatacatgt acaagattga aacagctggc ttacaaccgg gggagcattt gctagaaatt
     4201 tcattaggtt ataactctgg agaatatacg ggttggtatg attttccagt aactattaca
     4261 gaataaaaag gggcgagatg atgaaaaaag gtatgaaaca agtttgtgtc agtatggctg
     4321 ttgtaccact agtttggctg aatttaggga taactcagcc gttacaagtg gaagtgaaag
     4381 cggaagaaac gaaagaaaaa gaagtgaaaa aagaagcgaa tacaggagcc gcgaagcaac
     4441 ttagcaaaga agaatatgcg aaattaagtg cggaggaagg gcttggaaat gtccttgaag
     4501 caacggtgac tgataatgtc atcacgctta aaattgataa cggggatgaa gcagaagatg
     4561 attacttgga aatttccccg ctagcgaata atttgcttaa ggtgaatttg cgaccacgca
     4621 atatcgaaaa cagtccatct acacctatga ttgatccgaa tgcaactttc acagcgattg
     4681 gtgcgaccat tgacttggaa tcagatccga tgataatttc aacagatgaa tgtacgctag
     4741 aaattgctaa agagccagca cgaatgactt ttaaagataa aaatgggaaa acgttattgt
     4801 ctgaatcagc ggacggcggg atttttgatg gcggtgttag atttaagcgc ggcgcttctg
     4861 accatgttta tggtgcctat ggaattagtt ttagtgacgg agacctgggc atggaacgag
     4921 ataatactgc tgccgatagt aataagactg cacaagcggg tcagcaaggt aatgcaggcg
     4981 gtccgttcat gtggtctaca gcaggatatg gcttacttgt agatagtgat ggcgggtacc
     5041 cgtattccgt ttcagatgaa gaaaaattag agttttatta cggcgataca gtggttgaag
     5101 gccgtcgcta cgtgaaagaa aatgtagaga tgtatttaat gtctggtgag cccgaagaaa
     5161 ttatgtcttc ttatgctgat gtaacagggc atactccaat gatgccaaaa tggtcgcttg
     5221 gattctctaa ctttgagtgg ggaacaaatg aaacagaatt tagagaaaac attaatacgt
     5281 atcgtgcgaa agggattccg attgattcct tcgcgtttga ttatgattgg aaattctacg
     5341 gagatcctac gtatggtggc gattatggcg agtttgcttg gaatacagaa aacttcccat
     5401 cagcaaaaga cacaacgtta aaatccgata tggatgcact tggtgtaaaa atgattggga
     5461 ttacaaaacc gcgtgtcgta actaatttag aagatggaac agccacgcaa caagggaaag
     5521 atgcagaagc aaatggttac tggtatccag ggcaatctgc gtatgaagac tatgcattcc
     5581 ctgtaacggt aagaagtatt gacccataca acgaagatga acgtaattgg tggtggtcac
     5641 attctgagga tgccctagat aaaggaattg tcggttggtg gaatgatgaa acagacaaag
     5701 tatcttctaa tggagccgat tattggtttg gtaatttcac aactggattt acatcagaag
     5761 ctatgtatga aggccaacgc gactatacaa atgaacgtgt ttggcaaaca ggaagaacct
     5821 tctacccagg cgcacagcgt tattctactt ctacttggtc cggcgatatc ggcgttcagt
     5881 ggaaaaaagg cgaagttatt gactgggcaa atgggatgca agaacaacct agtacaatgc
     5941 tttcgacaat taatttagga cagacaaaat ggggcatgga tacaggtggt ttcaatgcca
     6001 attcgggcca agtgttaaac ccggacccag aactttatag tcgttggatg gaatttagtt
     6061 ctctagttcc agttttccgt acgcatggga atcaaaatca acaacgtcaa ccttggttct
     6121 atggtggcac ggcggaagaa gttgctaaaa gtagcatgac ttggcgctac tcaatgattc
     6181 cttatatgta tgcttatgaa cgtcaagcat atgactctgg tgttggtcta gttcaaccac
     6241 ttacgtttga taatcctact gatgaaaatg tggttaattt aacagatgag tggatgtttg
     6301 gtgatggatt acttgtggca cctgttttag aagaaggagc gggttctcgt gatatttatt
     6361 taccagcagg aacatggatt gactacaacc gtggcgacgt atacgaagga aatcaaacaa
     6421 tcagttatga agtgaatgat gacgactgga cagatgtgcc gatgtttgtt aaacaaggtg
     6481 ccattatgcc aatgcaacaa ccacaaaact atgttggcga atccgcagtc aaaacaattt
     6541 atttagacac ttttgcatca gataaagaga catcctttac acattacgat gacgacggaa
     6601 aatcttttga ttatgaaaaa gatacctatt taaaacaaaa aatgactact tcaaaaactg
     6661 ctgatactag tactttcacg attggtgcga aagaaggaag ttataaagca gacacagaga
     6721 attacattgt aaaactacac ggaaatgcgg ctgaaagcgt ccaagtaaat ggcgcagata
     6781 gcaaagttta tgacgattta tccgctttag aaactgctga tggtagcgga tatgctgtag
     6841 gtagcgatgt atacggagca gtaacatacg taaaagtacc agctcaagct gatgcagata
     6901 ctgtcattac aacttcaggt tctgcaagtg tcgtacaaac aggaacatac gaaatggaaa
     6961 caggatccaa ttttgctgat acagttgctg ataaaccggt tgctgaaaaa acgtatgtgg
     7021 atggctacga taaagacggc gccggaacta ctatctatgc aaatgtaaaa gactctggtg
     7081 attataatgt ggacctaact tacaaaaatg cttccgcaga taaccaatca ttaagtattt
     7141 ttgtcaatgg tgattatgta aaacaaacca cgctaaaacc aaacaccgat tggtcagttc
     7201 agtccgaagc attaccactt tcagcaggga aaaatagtat ttcttataaa gtggtaacgg
     7261 acacaggcga taaagctgat caagtatcac tagacaaagt aaatattggt ttcacaccaa
     7321 ctgtagcaaa agtcgaagca gaagaagcgg accttgccgg cactttaaaa gtggcgaacg
     7381 atcactggtt ctatagtgga gaaggttttg ttggtggatt tggagcagca ggagatgaaa
     7441 tcaagtttga agtggatgta ccagctgacg gcgagtacgt actaaacaca cgaacagcaa
     7501 atggaactgg catgccacaa acactcgatt tatatacgaa tggtgactac aactctcgcg
     7561 taactttccc ttccgaaggt gaaaactgga atatttggtc agatacagaa aaagctgtga
     7621 acttaaaagc aggaaccaat aaaattacct tcctaagaga cggcgaaact actggtaatg
     7681 taaatatcga tagaattctt gtttcggctg agccaatcaa ttcaccggta cagtcggaag
     7741 taaatctact cgataacggc ggatttgagc gggatgcagc ggcaacgacc aattgggtag
     7801 agtctcatcc tgatgggcaa gacaaagcat acggcgttga tagtggctca ggtgtcaatc
     7861 ctccagaatc accagcattt ggtaaacaga gcgcttattt ctatttacct ggcgcttaca
     7921 aacaaacact cgctcaacaa atcgcagttc cagttaataa tgcgaattac gacgttgaag
     7981 catgggtgaa agtaagcaac gatgatgcag caaaagcaca aatgacggtt aataattatg
     8041 atagcagcga tggtaaaaca attgacttag ttgcagatga cgtttggcat tatgtaacaa
     8101 tgaaggatgt caaagtaaca acaggcaata tcaatactag tttccaaatg gattccccag
     8161 gaggaacgag cattcacatt gataatgtaa gagttatgcc atccgcagaa taatatagaa
     8221 gggcggggaa tttcctcgtc ctttataaat tggaggagat aggatgaaaa atctatttag
     8281 actattcttg gtatttagca tagttattat cggggttgtt tcttttcaag cgatagatgc
     8341 aagtgcaaat gagacagatg taattaccca agatgatgtg gatgcggtga catctctagg
     8401 gttgggttat tttaccaatt acctcacaga tgaagattta caaatgctag gaaatgctta
     8461 ttttaccaat gtaaataata ttatgattta tcctacacaa accatgttta ctggctttcc
     8521 tgatttacca accttgccca aattagatac tttgagagca gaaggaaatc tatcaagcga
     8581 ggtactacct gaaaacatta cagttcccga ttatcaaaac tacccagaat taaagtatct
     8641 tgatcttagt aatcgaacta ttgttggggg cttacctaac ttttctaata ttcctaaatt
     8701 agaaaccttg ttgatgagca gttgtggact agcttcggaa gacgttccag attttacaaa
     8761 cttgaaaaat ttgcagaaag taaattttca aacgaaccaa tatagaacag aaatgacgga
     8821 tttcacttat ttggacagtt tggtaagtat ggatttaagt tataattatt taaatgtgtt
     8881 gccgcctact attgtggata aagtaatcgt actaggtcaa atcggaactt tgccagatca
     8941 aaatgttgtt tttggtgagg atacaaatat cacgctacca gtttatacgc aactagatga
     9001 tttaggtaga attagtggtt ttcaagaagt ttggattcgt gattcaaatg agaaggaaat
     9061 ttacaacgtg gcaaaagtgg attacgacga agtgacgaag cagattattg tgccaacaaa
     9121 taaccttgat aaaggtgaat acactattgg aattgatttt aatggaatag agccttatat
     9181 agaagaaggc gaagttatga attactcagt aaaaataacc attaattaat ggaaaacttg
     9241 tgacatgcta aataatagtt gcgcatttgg ctatgtcaca agttttttct gtttgtaaag
     9301 cctcgttttt tcctgtataa taactactgt tagactttaa ctctggggat gttacggatt
     9361 cgacagggat agttcgagct tgagttgcga gtcgggggga tcgtcctcgt tatcaacgtc
     9421 aaagccaata ataactggca aagaaaaaca aaacctagct ttcgctgcct aataagcagt
     9481 agcatagctg atcctccgtg catcgcccat gtgctacggt aagggtctca ctctaagtgg
     9541 gctacactag ttaatctccg tctggggtta aatagaagag cttaatcaga ctagctgaat
     9601 ggaagcctgt taccgggccg atgtttatgc gaaatgctaa tacggtgact acgctcgtag
     9661 atatttaagt gccgatattt ctggacgtgg gttcgactcc caccatctcc atattttatg
     9721 gaaactgaga agtgatacaa actgcttttt taagctgttt gtatcacttt tttatttgga
     9781 tgctaaacga tggagtcaag aaaataatta cgattttaga ataatcatgt ggattgaata
     9841 aatatacata tccattcaaa tgtaattttt tctttactac taaaattaat aaaaaatgac
     9901 aaatgaatag tattaaatga atgttttatg gcgctttttg ctgtttgatt tacaaact
//
LOCUS       DASDYK010000098         9753 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.098, whole genome shotgun sequence.
ACCESSION   DASDYK010000098 DASDYK010000000
VERSION     DASDYK010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9753
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.098"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..198)
                     /locus_tag="U0308_002297"
     CDS             complement(<1..198)
                     /locus_tag="U0308_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317257.1"
                     /translation="MKKLDFNCNDANYNAEFLMKILTTLKDITKVKQFTIEMIDAVPN
                     DQEQFKEEKGLFSEEVFDFNNL"
     gene            complement(417..836)
                     /locus_tag="U0308_002298"
     CDS             complement(417..836)
                     /locus_tag="U0308_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="effector binding domain-containing protein"
                     /protein_id="HEM2317258.1"
                     /translation="MAFEIVELKKETFTGNKVEIPEFDPQKGFGPMSEIKESAYTKFA
                     KNEKDYVGINASLDDLQYYIVASANSENGDTTFDIPAGKYAKFVTSETDRPALDGFIG
                     AAYGEVSQSDTVGIAGSFNLEDLREAEFTLYIPVVSK"
     gene            939..1859
                     /locus_tag="U0308_002299"
     CDS             939..1859
                     /locus_tag="U0308_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HEM2317259.1"
                     /translation="MKIERLIGIIMLLLQRELVSASEMATMFEVSKRTIFRDIDTLAM
                     ANIPIYTIAGTKGGIGIMPTYKVDKKLLTADDLTAIIASLDGMEQLLSSAETKKTLQK
                     MKNMLDHSSEPPKSSISLDFSNLSMKNELNAKVESLYLAIKKHQLVELSYIDRTGNQT
                     IRKTEPYHLLFRNRSWYLQGYSLERSDFRTFKMSRIVELKTLEETFEARPFSVKPFGA
                     PPDRPMFLMHEVSLIVDKIAREQIIERFDLVEISQQDDAHFLAKVTLPDHEAGYRFLL
                     QLGTHVTIQNRDDFYDNFVDYLKEIQGKYI"
     gene            complement(1898..2092)
                     /locus_tag="U0308_002300"
     CDS             complement(1898..2092)
                     /locus_tag="U0308_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317260.1"
                     /translation="MKYVKSQMKELVKDSVDLQERLQKLMKEMDLEKTFALKALYHSE
                     VADGGPYQTAYQDLDYKYKD"
     gene            complement(2179..2481)
                     /locus_tag="U0308_002301"
     CDS             complement(2179..2481)
                     /locus_tag="U0308_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2317261.1"
                     /translation="MKNILLVCNAGMSTSFLVEKMKAAGAEQGVEANIWAVSDAELHE
                     NWEKADVILLGPQVGYLKGNTEKVVGGKIPVEVINMLDYGRVNGAAVLERAIELIG"
     gene            complement(2499..3833)
                     /locus_tag="U0308_002302"
     CDS             complement(2499..3833)
                     /locus_tag="U0308_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2317262.1"
                     /translation="MAETKKKSIVNGFINVAQRLGGQIHLRSLRDAFASIMPFMILAG
                     FVTLINYVILEPTGFMGKIVNPDTLKTWQEIGISIGNGTLSVITLLVTVAISYHLCLN
                     RGYKNVIAPILVALSSFIVVTPIAMTFLPEGASKSIEVPNVIPVSYTGASGMFVGIIV
                     GLIATDLFIKLSKNKRMQINLTGNIPPAVIKSFNVLIPIMITVIIFSVMSFAVNQVFN
                     MDFNTLVTTIITKPLSYVTTSLPGFLLITSIANLFFGLGIHQAVISGPLLDPFLLQNM
                     QENMVAYANHQEIPHIINMAFKDTFAVMGGSGNTIGLLIAIFIFGKRKDYKDISKLSA
                     APSLFNISEPIIFGLPIVFNPLLIIPFVLAPIFSLTTAYYATAAGWINHVVVQTPWTT
                     PPIISGFLATGGDWRASVLQVIIIVVTVFIYLPFLRMDEKVAFATAQKTEAK"
     gene            complement(3826..5268)
                     /locus_tag="U0308_002303"
     CDS             complement(3826..5268)
                     /locus_tag="U0308_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2317263.1"
                     /translation="MKELLTFPKDFWWGSAWSAEQAEGRGDTGKAKTVWEHWFETEPN
                     RFYEGVGSEITTDHFNRYKEDVQWMKKTGQNSFRISISWARMFPNDGVGEVNPKAIAF
                     YRDLLTEMNENGIKPFANLYHFDMPVALQDAGGWESREVVDAYVHFADTCFKEFGDLV
                     YHWFTFNEPLGPILGGYLEDFHYPNQIDFKRGAQAGFNTILAHALAIKAFKKLNLSSK
                     IGVILNLSPTYPRSQNEYDLEAAEICDAFYTRSFLDPMVKGTFPEKLVEIMREYDQMP
                     EYTEEDLTIIKENTAQILGLNYYEPRRVKARLTAINEKSPFLPDWFFEPHNMPGKRMN
                     IYRGWEIYERGIYDLCIDIRDNYGNIESFISENGMGVANEERFLNEEGQIQDDYRIQF
                     VKDHLAYVHQAIAEGCDIKGYHLWTFIDCWSWINAYKNRYGLVSLDVETGKRTMKKSG
                     EFYKKMSDMNGFEYDTSKLVGTKREETTNG"
     gene            5425..6138
                     /locus_tag="U0308_002304"
     CDS             5425..6138
                     /locus_tag="U0308_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2317264.1"
                     /translation="MSGMAKYMEIYIDIRDKINQNKYEINEKLPDGDSMARTYDCSKL
                     TVKKALDMLVQEGMIIRRRGAGTFVKSHSTNGGEFALGPMSGLVNTFGKDNIKSKVIL
                     FSIEKPSKEVAEKLEMQDDYIYRIIRMREVGHKAYSIEHTYMPLAIIPGLEPRHLEDS
                     IYNYIRDDLKLKMQSAHVWVRGDKSNQEDSKLLDLEEPTFMMEIEKLAHLEDGRVFEY
                     SITRHTYESFVFETVFVQN"
     gene            complement(6177..6512)
                     /locus_tag="U0308_002305"
     CDS             complement(6177..6512)
                     /locus_tag="U0308_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEM2317265.1"
                     /translation="MPKLPNCPECNSEYAYEDRGLLICPECGHEWSAVAEEATEEKVF
                     KDANGNVLTDGDSVTVIKDLKVKGASNPIKMGTKVKNIRLVDGDHDIDCKIDGFGPMK
                     LKSEFVKKI"
     gene            complement(6549..7268)
                     /locus_tag="U0308_002306"
     CDS             complement(6549..7268)
                     /locus_tag="U0308_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2317266.1"
                     /translation="MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHAN
                     QKLRFVIERAKTYNVPKHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNN
                     VNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRD
                     ILDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFEKL
                     IDALEDLEDVQKVYHNVELED"
     gene            complement(7364..7873)
                     /locus_tag="U0308_002307"
     CDS             complement(7364..7873)
                     /locus_tag="U0308_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEM2317267.1"
                     /translation="MEEWDLLNENRELTGKTHIRGEKLAPGELHLVVHVCIFNEKGQL
                     LIQKRQKDKEGWPNYWDLSAAGSALKGETSRQAAEREVQEELGITIDLSNTRAKFSYH
                     FEAGFDDYWFITKDVELSDLTLQKEEVADARFVTKEELEVLRSSGEFIPYFFLNQLFN
                     LKNATSIHF"
     gene            complement(7923..8870)
                     /locus_tag="U0308_002308"
     CDS             complement(7923..8870)
                     /locus_tag="U0308_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003741444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HEM2317268.1"
                     /translation="MRKAERLNDMMLFLNDKNSFQLSDIMAKYGVSRSTAIRDIQSLE
                     EIGMPIYSERGRNGHYRVLRNRLLSPIVFNIDEVFALYFSMLTLKAYETTPFHLSVEK
                     LKTKFERCLSAEKIEMLRKTEEVFSLGYIKHNNQCEFLDIILQFTMEEKVCQINYDKN
                     GTEKTYIVQFYNISSAYGQWYVTSYNFETKRMQVFRCDKILALKENDTFEAKKMEELK
                     RVADSFNKKADVTTFEVEIASNGVDLFFKENYPSMKLRQQQGKNVIHGFYHKGEEQFI
                     INYLLGYGEKIIAIQPDSLRDMLLNELDTIKKHMQNLSS"
     gene            8965..9582
                     /locus_tag="U0308_002309"
     CDS             8965..9582
                     /locus_tag="U0308_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /protein_id="HEM2317269.1"
                     /translation="MKNLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVVFY
                     VEAGKKALEDLGLIVEELDVAAENLEEITMTLKKNDFIYVTGGNTFFLLQELKRTGAD
                     KLILKEIAKGKLYIGESAGAVITSPNISYIQSMDSVKKATNLTNYDALNLVDFYTLPH
                     YNNTPFKKITQQIIADYADDLKIFPISNCETIFVQGNVVTSKGIL"
BASE COUNT         2940 a         1966 c         1660 g         3187 t
ORIGIN      
        1 taaattatta aaatcaaaaa cttcttcgct aaatagccct ttttcttcct tgaattgctc
       61 ttgatcattt ggaactgcat ctatcatttc aatagtaaac tgcttaactt tggtaatatc
      121 ttttaaagtg gttaatattt tcattaaaaa ttctgcatta taattagcat cattgcagtt
      181 aaaatctagt tttttcaatc tatcgtcact cctattttta aggtgaagat catcattcag
      241 taatttgtag ttttccactc ttctattata gcatcgcaac tacatccctt ttgtgagcgt
      301 tttgtgaacc tctgtgcaat aacatactca aatgcagaac ttattagtgc atttttgatt
      361 tttttaatta ttaacataaa aaaagacccc tttcatccga aagagatctc ctcaatttac
      421 ttactaacaa ccggaatata aagcgtaaac tcagcttctc taagatcctc caaattaaac
      481 gatcccgcaa tgccaaccgt atcgctttga ctaacctcgc cgtatgctgc gccgatgaag
      541 ccgtctagag ctgggcggtc tgtttcgctt gttacgaatt ttgcgtattt gcctgctgga
      601 atgtcgaaag ttgtgtcgcc gttttcactg tttgcactag ctacgatgta atattgtagg
      661 tcgtcaagac ttgcgttaat gccaacgtag tctttttcgt tttttgcaaa ttttgtgtag
      721 gctgattctt taatttcgct cattgggcca aagccttttt gtggatcaaa ttcagggatt
      781 tctactttat ttccagtaaa tgtttctttt tttaattcaa caatttcaaa tgccataata
      841 tttccctcca aaaagttact taactttgat atgatgtaac tataacacac gaatgatgac
      901 aactgtctgt catcattcca aaaacaaagg agaaaaaaat gaaaatcgag cgactcatcg
      961 gaattatcat gctgcttctc caacgcgagc tagtcagtgc ttctgaaatg gctacaatgt
     1021 tcgaggtttc caaacgtact attttccgcg acattgacac actcgcgatg gcgaatatcc
     1081 cgatttacac aattgccgga acaaagggtg gcattggtat tatgcctacc tacaaagtcg
     1141 ataaaaagct tctcacagcg gatgatttaa ccgcgattat tgctagtttg gacggaatgg
     1201 aacagttgct ttcttccgcc gaaaccaaga aaaccctcca aaaaatgaaa aacatgctcg
     1261 accattcaag cgaaccgcct aaaagttcca tttcgctcga tttctccaat ttgtccatga
     1321 aaaacgaatt aaacgctaaa gtcgaaagtt tatatttagc gattaaaaaa catcaactcg
     1381 tagaactcag ctatattgat cgaacgggca accaaaccat tcgtaaaact gagccttatc
     1441 acctcctgtt taggaatcgt tcttggtatt tgcaaggtta cagtttggaa cgcagcgatt
     1501 ttcgaacatt taaaatgtcg cggattgttg aactaaaaac gctagaagaa acttttgaag
     1561 ctcgcccttt tagtgtaaaa ccgtttggcg ccccacccga cagaccgatg tttttgatgc
     1621 atgaagtcag cttaattgtc gataaaattg cccgcgagca aatcatcgag cgctttgatc
     1681 tagtcgaaat ctcgcagcaa gatgacgcac actttttggc aaaagtgacg cttcctgatc
     1741 acgaggctgg gtaccgcttt ttgctccaac ttggaacgca tgtaaccatt caaaaccgtg
     1801 atgactttta cgataatttt gttgactact taaaggaaat ccaaggaaaa tatatctaaa
     1861 aatggctctg ctaattgttt agcagagcca tttgatgtta atctttatat ttataatcca
     1921 aatcttgata agctgtttgg tacggtccac catcagctac ttctgaatga taaagtgctt
     1981 ttaaagcgaa agttttttct aagtccattt ctttcattag cttttgaagg cgttcttgca
     2041 agtctacgct atcttttaca agctctttca tttgtgattt tacatatttc ataataattc
     2101 cgctcctttt cacacattat aacactttct tccccgataa aaaaggagtg cgactataag
     2161 ccacactccc ttactttttt aaccgattaa ttcgattgct ctttcaagta ccgccgctcc
     2221 attgacacgg ccgtagtcta gcatattaat tacttcgaca ggaatttttc cgccaactac
     2281 tttttctgtg ttccctttta aataaccaac ttgtggtcca agcaaaatga catctgcttt
     2341 ttcccagttt tcgtgtagtt cagcgtcgga tacagcccag atatttgctt caacgccttg
     2401 ttccgcgcct gctgctttca ttttttctac taagaaactt gtggacatac cagcattaca
     2461 tactaataaa atgtttttca ttggttaaac ttccttcctt attttgcttc tgttttttga
     2521 gctgtagcaa aagcaacttt ttcatccata cgtaggaacg gcagatagat aaagactgtc
     2581 acaacaatga taattacttg taaaacggac gcgcgccagt ccccgccagt tgctaggaaa
     2641 ccagaaataa ttggcggtgt cgtccacggg gtttgtacaa ctacatgatt aatccaacct
     2701 gctgctgtcg cataatacgc tgttgttaaa gagaaaatcg gcgctaatac gaacgggata
     2761 ataagtaacg ggttgaacac aatcggcaga ccaaagatga ttggctcact gatgttaaat
     2821 agtgatggtg ccgcagatag tttcgagata tctttgtaat cttttcgttt cccaaagatg
     2881 aaaatggcaa ttaataagcc aatcgtgttt cctgagccac ccataaccgc aaatgtgtct
     2941 ttgaaagcca tattaataat atgcggaatt tcttgatgat tcgcgtaggc aaccatgttt
     3001 tcttgcatat tttgaagtaa aaatggatct agtaacggac cagaaataac tgcttggtga
     3061 atacccaaac cgaagaataa gttagcgata gaagtaatca gcaagaagcc tggaagactt
     3121 gtcgtcacat agctaagtgg cttcgtgata atcgttgtca caagtgtatt aaagtccatg
     3181 ttgaaaactt gattaacggc aaatgacata actgagaaaa taataaccgt aatcataatc
     3241 ggaattaaca cgttaaatga tttaataact gccggtggaa tatttcctgt taaattgatt
     3301 tgcatacgtt tgtttttcga taatttaatg aataaatcgg ttgcaattaa accaacgata
     3361 ataccgacga acatgcctga cgcgccagta taactaactg ggataacgtt cggtacttcg
     3421 attgattttg atgcgccttc tggaaggaac gtcatcgcaa tcggtgttac aacaataaaa
     3481 gaagataaag cgacaagaat tggagcaata acgtttttat agccgcggtt caaacataaa
     3541 tgatacgaaa tcgccacagt gactaaaagc gtaataacac tcagcgtacc atttccgatt
     3601 gaaataccaa tctcttgcca tgttttaagt gtatctgggt taacaatttt gcccataaag
     3661 ccagtcggtt ctaaaataac atagttaatc agcgtgacaa aaccagctaa aatcatgaac
     3721 ggcataatac tcgcaaaagc atcacgcaat gaacgcaaat gaatctgacc accaagacgt
     3781 tgtgctacat taataaatcc attaacaatc gacttctttt tcgtttcagc cattagttgt
     3841 ttcctccctt ttcgtcccaa ctagtttgct tgtatcatat tcaaaaccgt tcatgtcact
     3901 cattttttta taaaattcgc cacttttctt cattgtgcgt ttgccagttt cgacatcaag
     3961 tgaaacgagt ccgtaacggt ttttatatgc gttaatccac gaccaacaat caatgaatgt
     4021 ccacagatga taccctttaa tatcgcaacc ttctgcaatc gcttgatgta cataagccaa
     4081 atgatctttg acaaattgaa tccggtaatc atcttgaatt tgtccttctt catttaagaa
     4141 acgctcttca tttgccacac ccataccatt ttcagaaata aatgattcga tattgccgta
     4201 attatcacga atatcaatac ataaatcgta aatcccacgt tcataaattt cccaaccgcg
     4261 gtaaatattc attcgtttac ctggcatatt atgcggttca aaaaaccaat ctggtaaaaa
     4321 cggacttttt tcattaattg ctgttaaacg ggctttgacg cgtcttggtt catagtaatt
     4381 taggccaaga atttgcgccg tattttcttt aataatcgtc aaatcttctt ccgtgtattc
     4441 cggcatttga tcgtattcgc gcataatttc aactaatttt tctgggaaag ttcctttaac
     4501 catcggatcc aagaagcttc tcgtgtaaaa agcatcacaa atttccgcag cttctaaatc
     4561 gtattcgttt tggctacgtg gatacgtcgg gctaaggttt aaaataacgc cgatttttga
     4621 tgacaagttt aattttttaa atgctttaat agctaacgca tgcgccaaaa tcgtattaaa
     4681 accagcttgt gcaccgcgtt tgaagtcgat ttgattcgga taatggaaat cttctaaata
     4741 gccgccaaga atcggtccta gtggttcgtt aaacgtaaac cagtgataaa ctaaatcgcc
     4801 gaattcttta aaacaagtat ccgcaaaatg aacataggca tctacaactt ctcttgattc
     4861 ccagccacca gcatcttgaa gtgcaacggg catatcgaaa tgatataagt tggcgaatgg
     4921 tttgataccg ttttcattca tttcagtaag taaatcgcga taaaacgcaa tagctttcgg
     4981 gttcacttcg ccaacaccat cattaggaaa cattcgcgcc catgaaatcg aaatccggaa
     5041 cgaattttgt cctgttttct tcatccactg tacgtcttct ttataacgat taaaatgatc
     5101 tgttgtaatt tctgaaccta cgccttcgta aaagcgattc ggttctgttt caaaccaatg
     5161 ctcccaaaca gtttttgcct taccagtgtc gccgcgacct tctgcttgtt ccgcagacca
     5221 cgccgatccc caccaaaaat cttttggaaa cgttaataat tctttcattt tttatggcct
     5281 cccttttgtc aaaataaata tagcatacat ttatttaaaa aacaatactt ttattaaaat
     5341 atatatactt ttgtttatag ggataccttt ttgtaaaagt atatggtata ctatgcttat
     5401 tacatcagta aaggagccaa taaaatgtcg ggaatggcta aatacatgga aatatacata
     5461 gatatccgtg ataaaatcaa ccaaaacaaa tacgaaatta acgagaaatt gcctgatggg
     5521 gacagtatgg ctcgcacgta tgattgcagc aagctcactg tcaaaaaagc actggatatg
     5581 cttgtacaag aaggcatgat tattagacga cgcggggctg ggactttcgt gaaatcccat
     5641 tcgactaacg gcggagaatt cgcgcttggg ccaatgtccg gacttgtaaa tacatttgga
     5701 aaagacaata ttaaatccaa agtcatttta ttttctattg aaaaaccatc gaaagaagtc
     5761 gcagagaaat tagagatgca ggatgactat atttaccgaa tcatccggat gagagaagtt
     5821 ggtcataaag cctattcgat tgaacatact tatatgccac ttgcgattat tccgggtcta
     5881 gaaccacgtc atttagagga ctcgatttat aattatattc gggatgattt gaaacttaag
     5941 atgcagagtg cgcatgtttg ggtacgcggg gataaatcaa atcaagagga tagcaagctc
     6001 ctcgatttag aagaacctac ttttatgatg gaaattgaaa aattagcgca tttggaagat
     6061 ggtcgtgtgt tcgaatattc gataacgcgc catacgtatg aatcgtttgt gtttgaaacg
     6121 gtttttgtgc agaattaaaa aaaacagcga ctctctacta agagaatcgc tgttttttat
     6181 atcttcttaa caaattctga ttttaatttc attgggccga agccgtcaat tttgcaatca
     6241 atgtcgtggt cgccgtctac taggcggata ttttttactt ttgttcccat tttgattggg
     6301 tttgatgcgc cttttacttt aagatctttg atgactgtga cagaatcccc atctgttagt
     6361 acgttgccgt ttgcatcttt gaacactttt tcttcggtag cttcttctgc tacagcgctc
     6421 cactcatggc cgcattccgg gcagattaat aagccgcgat cttcgtaggc atactctgag
     6481 ttacattctg ggcaatttgg taattttggc attttatcaa ttcctccgat tgttgtaata
     6541 gttggctgtt aatcttctaa ttcgacgtta tgatatactt tttgcacgtc ttctaggtct
     6601 tctaaagcat caattagttt ctcgaatttt tctaagtcct cacctgataa ttgaatatca
     6661 ttttgaggaa tcatttcgat ttccgctact gtaaattctt caattccagc cgctttcaaa
     6721 ccttcttgta ctttgtggaa atcttctggt tctgcataaa taatcgcttg gccatcttcg
     6781 tctaaaatat cacgaacatc aatatccgct tccattaaaa gttctaataa ctcatccgcg
     6841 tcttttcctt caacaccaaa aatggctgta ttatcaaaca tataagctac tgaaccactt
     6901 acgcccatgt tgccgccgtt tttgctataa gctgcgcgaa catcggatgc cgtacgattc
     6961 acattatttg tcagtgcgtc tacgataatc atcgaaccat ttggaccaaa gccttcatag
     7021 cgcagttctg aatatgtttc atcgccagtg cctttcgctt tttcgattgc acggtcaata
     7081 atatgtttcg gcacattgta tgtttttgca cgttcaataa caaaacgtaa tttttggttg
     7141 gcatgcggat ctgggtcgcc cgatttagcc gctacatata tttcaattcc aaattttgca
     7201 tagatacgac tatttgtttt atcttttgac gcttttttct ctttaatatt tgcccattta
     7261 cggcccatat taccactcgc tttctaattg gagttttctc gtgtctctgt actattataa
     7321 gtgtaggaaa cgaatttgtt aagtggaaat ttagctatat tcgttaaaaa tggatagatg
     7381 tggcgttttt gaggttaaaa agctggttta aaaagaagta tggaataaat tcgcccgaac
     7441 ttcttaacac ttctaactct tctttagtca caaaacgggc atctgctact tcttcttttt
     7501 gtaaagttaa gtcgctaagt tccacgtctt tcgtaataaa ccaataatca tcaaatcccg
     7561 cttcgaaatg gtaactgaat ttggcacggg tgttacttaa atcaattgta atccctagtt
     7621 cttcttgcac ttctcgttca gcagcttggc gacttgtttc gccttttagc gcagaacccg
     7681 ccgcagaaag atcccaataa ttcggccaac cttctttatc tttttggcgc ttttggatta
     7741 aaagttgccc tttttcgtta aaaatacata cgtgaacaac caaatgaagt tctccgggcg
     7801 ctagtttttc accgcggata tgtgttttcc cagttaattc acgattctca tttagcaaat
     7861 cccattcttc cactaaaatc ggctccttct aatcattgac ttgttttcat tatacaacaa
     7921 agttaggatg ataaattttg catatgtttt tttatcgtat cgagctcatt tagcaacata
     7981 tctcgcaatg aatctggctg gatagctata attttttcac cataacctag taaataattg
     8041 ataataaatt gttcctctcc tttatgataa aaaccatgaa taacattttt accttgctgt
     8101 tggcgaagtt tcatcgatgg ataattttct ttaaaaaata agtcaacacc atttgaggca
     8161 atttccactt caaaggtagt tacatcagct tttttattaa aagaatcagc cactcttttt
     8221 aattcctcca ttttcttagc ttcaaaagta tcattttctt ttagcgcaag gattttatca
     8281 caacgaaata cctgcatccg tttcgtctcg aagttataac tcgtcacata ccattgcccg
     8341 tatgccgaag atatattata aaattgaaca atatacgttt tttcagtccc atttttatca
     8401 taattaatct gacacacttt ctcttccatc gtaaattgca aaataatatc cagaaattca
     8461 cattgattat tatgctttat atagccgaga ctaaatactt cttctgtttt tcgaagcatt
     8521 tcgatttttt cagctgaaag acaacgttca aatttcgttt ttaatttttc cacacttaaa
     8581 tgaaaaggtg ttgtttcata ggcttttaag gtaagcatcg aaaaatagag cgcaaatacc
     8641 tcatcgatat taaaaacaat gggcgagagt agccgattac gaagcacccg ataatgacca
     8701 tttcgtcccc gttccgaata tatcggcatg cctatttctt ccaaagactg tatatctcga
     8761 atagcagtac tgcgggaaac gccatatttt gccattatgt cgcttaattg aaacgaattt
     8821 ttatcattta aaaacaacat catatcattt aatcgctctg cttttctcat cgccatctct
     8881 tttctttttt cagattaaaa ggtgtcacta attgatacct ttaaccatta tactataatt
     8941 agaaaccaaa ggagctaaaa aatgatgaaa aacttatttt taacctcgtc ttttaaagat
     9001 gttgtaccat tatttactga atttgaaagc aatctccaag gaaaaaccgt tacttttatc
     9061 ccgacggcta gcaccgttga agaagttgtt ttttatgtag aagctggtaa aaaagcgctc
     9121 gaggatttag ggttaattgt agaggaacta gatgtggcgg cagaaaatct agaagaaata
     9181 acgatgacac tcaaaaaaaa tgattttatt tatgttactg gaggaaatac tttcttttta
     9241 ctacaagaat taaaacgaac tggtgcagat aaattaattt taaaggaaat tgctaaagga
     9301 aaattatata ttggtgaatc agccggtgca gtcatcacga gtcctaatat atcgtatatc
     9361 caatcaatgg acagcgtaaa aaaagccact aatttaacca actatgatgc tttaaattta
     9421 gtcgatttct atacgcttcc tcattacaac aacacacctt ttaaaaaaat aacacaacaa
     9481 ataatagcgg actatgcgga tgatttaaaa atatttccga ttagtaactg cgaaactatt
     9541 tttgtacaag gtaacgtggt aacttcgaaa ggaattcttt aacagcattc tccaaaaacg
     9601 ccttgaaact tggatatccg tttaagtttc aaggcgtttt tgttgtataa taaaactaaa
     9661 actacatcat aggaggtaca acatgtacaa aatttttagt ttcgtttcat taatacttag
     9721 tatgctatgt tttatgggct tacaagtttt aaa
//
LOCUS       DASDYK010000099         9645 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.099, whole genome shotgun sequence.
ACCESSION   DASDYK010000099 DASDYK010000000
VERSION     DASDYK010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9645
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.099"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(366..5498)
                     /locus_tag="U0308_002310"
     CDS             complement(366..5498)
                     /locus_tag="U0308_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2317270.1"
                     /translation="MKNIRHWKKLVIAMVIGLLVFQNVSPVLATMTDDETAKTTLKIT
                     KEDKDTKEKINGSTFEIKNKETGETNDLTISANGEATMDSLSPGDYLVKEKVAPKGYT
                     LDEKEYSVTLAEKEEVITSVSAKVQEETTKEATTPTPVKKATQNANLKAAITDNIFNK
                     VTLKDGNGDEINTSDRIQNGSGVVLNMNFAFSGKNYKAGDTFTTVLPDAFNFGNKNLS
                     GNFLPSTEAEWTLDVTTRELTITFLKDGIQEGDYDVNISTAFKVFTSTEETIQEVVFK
                     TAGKDTVYQIEVVPVVNYPTTVGITANPGVVNPTKGQVDAKFNLTKEKDAKGELKLND
                     YASGGTTTIDKDTIKVYSSDVSAGGTFIGTKKLLVEGTDYTLTYSATSLTVTLNGGLA
                     GKGYQVTYDRTINKPSDSLSYMSTQAYTVGDSGTLSSNSAYVYLTMTNYKHIEKKATY
                     NGSTQSIDWKINFNFDQDEISPSTVLTDVLADNDVEYVADSLKIKRVTFNATNGSPIV
                     GGDASSDWTTSAISANGNFNLTYKNTNTNAYEITYSTKITDFSDRKIKNEITDENGVS
                     ADATIAIQPDLLKKEAGTIDYFNNTMTWKITANSDRIKMGNLNITDEFSTGVKALKSY
                     TVRAYTDNINSVLLTEGKDYTIDKDVTPAGFYIQLIGDYATTDKKIVVDFVTEIDLSD
                     VTKTIDNKASISYYDGGIIKYVDDVKASMTPDPAMMTNGGKYGSYNSTTGNIDWIVSV
                     NAMAKNYDNLIFDDAIPTGLTYVEGSLQYRNVASTSEMMNLYIPLNSVGTVAKTGDKN
                     YPTKVDTTGNKLHLEFANLENSRVFIKYSTKPNENWYFYSYVQNTAKVSDNGVGEKSY
                     SYQAYASKLYNAMTKTATIDPSFDNKVNWVVTLNNISADRPINNPTITDTMKTGTTGA
                     QVVKSSFKVINETTGEDIDSKYYDITYTDNNFTIQFKDYKATAPIKVTYSTISLMSGL
                     VSNTATTASPDYGSLPMTYKSRTTSISPAFTIGSGSGTATIGSLEITKVDKKDNTKKL
                     AGAKFQLYTLEGDKAGQEATTDTDGKIVMDGLQSGKYKLVETEAPTGYTISDEYKDGK
                     EITVTADAVTNVTIENTEQTGSAVLLKEDSVTKDAIAGAEFELQNADGTKVAENLVSN
                     ADGKIEVTDLAPGDYQFVETKAPTGYVLDATPSKFTIEFNQEAAVIVTKENTAKTGSV
                     VLTKEDSVTKATIAGAEFDLQKADGTKVSENLVTDADGKIEANDLAPGDYQFVETKAA
                     AGYVLDATPSEFTIEFNQDKAAVVTKENTAKSGSVVLTKQDSATKAALSDAEFELQTA
                     TGTKVKDNLTTNASGEIEVADLAPGDYKFIETKAPTGYELDATPVTFTIEFNQSTAVK
                     VTKENVAKTGSVVLTKLDSKSRSNLAGAEFELQTKLGVSLKDKVVTEANGQLQIDNLA
                     PGDYQLVETKAPTGYELDATPVEFTIEFNQKDAVQVTKTNKMSTGSVVLTKTDGQTKA
                     PLADATFKLVDADNNVTENLTTDASGKLEITNLAPGDYQLIETKAPKGYELDTVPVDV
                     KISFNQNQVLQVTKTNIKTVVSGKVIAEFVDTKGNVLAEQEIHAGLVGEKYVTKAKSI
                     AGYKLTKDPTNKVGIYKEADQKVTFVYEKNKSPLVVDPTKPIKPSKPTKPSANPSKQA
                     TVKKAQSLPSTGDNSLANLIITGLFASTLGLFLLRKSKKVND"
     gene            complement(5679..9134)
                     /locus_tag="U0308_002311"
     CDS             complement(5679..9134)
                     /locus_tag="U0308_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2317271.1"
                     /translation="MSHLKKLVSILICTLLIVSFLPFSVWANSQERDGTDVEEITTKE
                     KVTQETTSNETTSEPLKETTVNEAINTKSFPTGNYSGDFSINSQKDVIESGQTVNYNI
                     YLKITGPNTTYQNAKLVINLPKNGEFNQSLNELKIAGETPSYNKTTRQLVYTYQTLNS
                     GVVDKVILKLTTKNGYTPNGTKLVVTGELSADNLLGKVTEQAETTVNATATTALSNDF
                     ARVENSINNNPSQGDIGIWSFNLNIPKKSTGSLFMEEGKKIVIEYILADKLDYLGVAG
                     DTPEPTKVEGQKLTWEIAAPTYLEQEKANSLLNKTFQIRTFFQTTIPNFATVENKAVA
                     TTNFVTLADSIVDTSKASVSVSASDPATIPPTIGSVYAPAHRGPVDANWGIATVTGNP
                     DIKAYDTAKLGFSLMLNSAMNDSPSYDFLYYDAYYNIDDNLNLDYFQSGDFYFKPNVN
                     YPGWAQLKKSPKYNLLVKYDGDSDWTTLKEDVELSKMYSRKDLGIPDDKHVSKVWLHF
                     TYAPAGMYAANLSFFTTVKEGYVGEVRNSTQINMYGADSQGYIHYYDDTNPWPEAWKN
                     YAGDRTAQIIPQPTGKNKFVQGSVAFDDTDGNLINIGDNSISVNLESNKASISRLKGP
                     FEAVVLLPSGVKMKKTEQNDFNVTVLNENYQNAGRQLLKVKWDKKTLLPAEKLTAKIN
                     VSVAKDTPSNMTVEMFGFLQETDFNVPEVTGTPTISDTKMEIDSDDINQNGNSEESRI
                     TSGNHYILNTSNHLKISKKAKGNRDKEYSGLANATTNSIVSYQLSLENDSDEKIANMV
                     LMDVLPSENDLGITDNSERGSKFNLELTKAVAIPNEWKDKVDVKYSTAKNPKRAGVLD
                     KHTIYPTGSEPLVDNAEATEADWLTASEVQDWSKIYSFKMELKEGIEWIPGKSMKIQF
                     DLKTPKKNQIDKGFLNQQTKKEDRAAWNSFAVAVNNSQVIEPAQVGVALDDSVAPVTV
                     QYVDQNHKQIASPETLTGAYGEKFTAKQKKITNYTLVKTPANVSGTFNEKAQTVTFVY
                     QKVTAGNIIVDYVDKNGEKLADSIVLTGKLNSSYRTSAKKISGYKLYQTPKNASGKFL
                     NSSQKVTYVYEKTSALSVSSNERAGNVKKSEKLPQTGDSKKTNLWFILGMLLLSSAFV
                     LAKKR"
     gene            complement(9327..>9645)
                     /locus_tag="U0308_002312"
     CDS             complement(9327..>9645)
                     /locus_tag="U0308_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="siphovirus Gp157 family protein"
                     /protein_id="HEM2317272.1"
                     /translation="AEMAGIEAKRLLKRKQALENNVQNLKNYLQTEMERMEIRKINST
                     LFTIQIQKNPPSVEIVEEALLKSFFLLQEPKIDKKRIAEILKSGEEVKGARLVESESI
                     RIR"
BASE COUNT         2510 a         1836 c         1630 g         3669 t
ORIGIN      
        1 caacaatggt tgctaataca ggcgacacgt tttgaaaaac gagtaaacca ataattgcaa
       61 cgataaaaaa acctctccat ttcaccatat atttcattaa gctgttttcc tcctatgcaa
      121 gttgtgtctg ttgtataaga cctatgactt gttgaattat aacaatgggc gagaagtcga
      181 aaatgttctt aaagaacaac aaagcggatt tattgtgtct ttttagtgaa caaaaaagta
      241 tgttttttgc taaaaatata ctttttcaat acaaaaccct cttttcctgc attattatat
      301 ggaatttttt ctatatataa tagataaaaa agtcgctatc ctgttaagaa tagcgactac
      361 aattattaat catttacttt tttggatttt cttagtaaga aaagtcctag tgtactagcg
      421 aataatccgg taatgattag attagctagg gaattatctc ctgttgaagg aagactttgt
      481 gcttttttca ctgtggcttg ttttgaaggg tttgctgatg gttttgttgg tttagaaggt
      541 ttaattggtt tagtagggtc gacaacgagt ggtgatttat ttttctcata tacaaaggtt
      601 actttttgat ctgcttcttt gtatatgccg actttattcg tagggtcttt cgttagttta
      661 taacccgcga tagatttcgc tttagttaca tatttctccc cgactaaacc tgcatgaatc
      721 tcttgttctg ctaatacatt tccttttgta tcaacaaatt cagctattac cttgccgctt
      781 acaactgttt taatatttgt tttagttact tgaagcactt gattttgatt aaaactgatt
      841 ttcacatcga ctggaacggt atctaattca taaccttttg gtgctttcgt ttcaattaat
      901 tgataatcac caggggctag attagttatt tccagtttac cagaagcatc tgttgttaga
      961 ttttctgtga cgttattatc tgcgtctact aatttaaacg ttgcatctgc aagaggggct
     1021 tttgtttgcc catcagtctt agttaacaca acagatccag tagacatttt atttgtttta
     1081 gtcacttgaa ctgcatcttt ttggttaaat tcaatggtga attcaactgg tgttgcatca
     1141 agctcataac ctgttggagc tttcgtttct actaattggt agtcgcctgg tgctaagtta
     1201 tcaatttgca gttgaccatt tgcttctgtc actactttat ctttcaaact gacaccaagt
     1261 tttgtttgta attcgaactc tgcaccagct aaattacttc ttgatttact atctagctta
     1321 gttaagacca cactaccagt tttcgcaaca ttttcttttg ttactttgac tgcagtcgat
     1381 tggttaaatt cgatggtaaa agtaaccggt gtggcatcta attcgtagcc tgttggtgct
     1441 ttggtttcaa tgaacttgta atcgcctggt gctaaatcag ctacttctat ctcaccactt
     1501 gcattcgttg ttaaattatc ttttacttta gttccagtgg cagtttgtag ttcaaattcc
     1561 gcatcagata acgcagcttt tgttgcacta tcttgttttg ttagaactac gctgccagat
     1621 tttgctgtgt tttcttttgt tacgacagct gctttgtctt ggttaaattc aatcgtgaat
     1681 tcgcttggcg ttgcatctaa tacatagcca gccgcagctt tcgtttctac aaattggtag
     1741 tctcctggtg ctaaatcgtt tgcttcgatt ttaccgtctg cgtctgttac taagttttcg
     1801 gatacttttg ttccgtctgc tttttgtaaa tcgaattccg ctccggctat cgtagctttc
     1861 gttacactat cttctttcgt tagaaccaca ctaccagttt tcgctgtgtt ttcttttgta
     1921 acaattacag cggcttcttg gttaaattca atcgtgaatt tgcttggcgt tgcatctaat
     1981 acatagccag ttggcgcttt tgtttctaca aattggtaat cgcctggcgc taagtcagtt
     2041 acttcgattt taccatctgc attagatact aagttttcag cgacttttgt accgtctgca
     2101 ttttgtaatt cgaattctgc tcctgcgata gcgtctttcg ttacactatc ttcttttaaa
     2161 agaaccgcgc taccagtttg ctctgtgttt tcaattgtaa cgtttgtaac tgcatcggcg
     2221 gtaaccgtga tttctttacc gtctttatat tcatcactaa ttgtgtaacc tgttggcgct
     2281 tctgtctcaa ctagtttata tttcccagat tgaaggccat ccatcacgat tttaccatct
     2341 gtatcagtgg tagcctcttg tcccgcttta tcaccttcaa gcgtataaag ttggaattta
     2401 gctcctgcta gttttttcgt attatccttt ttatccactt tggtaatttc aagtgaacca
     2461 attgttgccg tcccgctacc actaccaata gtgaaggctg gcgatatgct tgttgttctt
     2521 gatttatatg tcattggtaa actaccgtag tcaggagaag cagttgtcgc tgtgttacta
     2581 acaagcccag acatcaagct gattgtacta taggttactt taattggtgc agttgcttta
     2641 tagtctttga actggatagt gaaattattg tctgtgtaag tgatgtcata atattttgag
     2701 tcaatatctt cacccgtcgt ttcattgatt actttaaagc tactttttac tacttgcgct
     2761 cctgttgttc ctgttttcat tgtatctgta attgttggat tgttaatagg acgatctgca
     2821 gagatattgt tcagtgtaac aacccagtta actttattat caaaagatgg atcaatagta
     2881 gccgtttttg tcatcgcatt ataaagtttg cttgcgtatg cttggtaact gtaagatttt
     2941 tcgcctactc cattatcgct caccttcgca gtgttttgta cgtaggagta gaaataccag
     3001 ttttcgtttg gtttggtact gtatttaata aatacgcgtg aattctccaa gttagcgaat
     3061 tctaaatgta atttattccc agtagtatcg acttttgttg ggtagttttt atcacctgtt
     3121 ttagctactg ttccaacaga gttaagcggg atgtataaat tcatcatctc acttgtggaa
     3181 gccacattac gatattgtag tgagccttct acgtatgtta atccagttgg aatagcatca
     3241 tcaaaaatta agttgtcata gtttttcgcc atagcattta cagatacaat ccaatcgata
     3301 ttccccgtag tggagttgta cgatccgtat ttaccaccat ttgtcatcat agctgggtct
     3361 ggtgtcatgg aagcttttac atcatcaaca tacttgataa ttccgccatc gtaataagaa
     3421 atggatgctt tattatcaat cgtttttgtt acatcagaaa ggtcaatttc tgtgacgaaa
     3481 tcaactacaa tttttttgtc tgttgtagca taatcgccga taagttgaat ataaaaacca
     3541 gctggtgtca catctttatc aatcgtataa tctttgcctt ctgttaataa gacgctattg
     3601 atattatctg tataggcacg aacagtgtag ctcttaaggg cttttacacc agtagaaaat
     3661 tcatctgtga tattaagatt ccccatctta attctgtcag agttggcagt gattttccat
     3721 gtcatcgtgt tattaaaata gtcaattgtt ccagcttctt ttttcagtaa atctggttga
     3781 atcgcgatcg ttgcgtcagc ggaaacacca ttttcatctg taatttcatt tttaatttta
     3841 cgatcactaa agtccgtgat tttcgtggaa taagtgattt catatgcgtt tgtgtttgtg
     3901 tttttatacg ttaaattaaa attcccattt gccgagattg ctgaagttgt ccaatcactt
     3961 gaagcgtcac ctccaacgat tggcgatcca ttcgttgcgt taaaagttac tcgtttaatt
     4021 ttaagtgaat ctgctacata ttcgacatca ttatccgcta aaacatcggt aagcactgtt
     4081 gaaggagata tttcgtcttg atcaaagtta aagttaattt tccaatcaat actttgtgtt
     4141 gagccgttgt aagtagcttt tttctcgata tgcttataat ttgtcattgt caggtaaaca
     4201 taagcggagt tgcttgataa tgttcctgaa tcgcctactg tataagcttg tgtagacata
     4261 taagaaagtg aatcacttgg tttattgatt gtgcggtcat atgttacttg gtagcctttc
     4321 ccagcaagcc caccgtttaa cgtaacagtt agagaagttg cggaataagt tagcgtataa
     4381 tctgtgcctt ctacaagtaa ttttttcgta cctatgaagg ttcccccagc actaacatca
     4441 ctcgaatata ctttgatggt atctttatca atagttgttg ttccaccgga agcataatca
     4501 ttaagtttca gctcaccctt agcatctttt tcttttgtta agttgaactt ggcatctact
     4561 tgaccttttg tcggatttac tacccctgga ttcgccgtaa ttcctacagt tgttgggtag
     4621 ttaactactg gtacaacttc gatttgataa acagtatctt tcccagctgt cttgaaaaca
     4681 acttcctgta tcgtttcttc tgttgaggta aacactttga aggctgtact gatattcaca
     4741 tcataatcgc cttcttgaat gccatctttt aagaaagtaa tcgtaagttc acgcgttgta
     4801 acgtcaagcg tccattctgc ttctgtagat ggtaagaagt taccacttaa atttttgttc
     4861 ccaaagttga aagcatctgg taaaacagtt gtaaacgtat ctcccgcttt ataatttttc
     4921 ccagaaaacg caaagttcat gttaagcaca acaccgctac cattttgaat tcggtctgaa
     4981 gtgttgattt catcgccatt accatctttt agcgttactt tgttaaaaat attgtctgta
     5041 atagcagctt ttagatttgc attttgtgtt gcttttttaa ccggtgttgg tgttgttgct
     5101 tcttttgttg tttcttcttg cacttttgct gaaaccgaag taatcacttc ttctttttct
     5161 gctaaagtta cactatattc tttttcatct agtgtgtaac cttttggcgc aactttttct
     5221 ttaacaagat agtcaccagg tgaaagtgaa tccatagtcg cttcaccatt cgcgctgatt
     5281 gttaaatcgt ttgtttcgcc cgtttcttta ttctttatct caaaggtaga accattgatt
     5341 ttttcttttg tatctttatc ttctttggtg atttttaatg ttgtttttgc cgtttcatcg
     5401 tctgtcattg tagctagtac aggtgaaacg ttttggaata ctagtaatcc gataaccatt
     5461 gcaataacta gcttcttcca gtgtctgata tttttcactt tgttttgtcc tcctataatc
     5521 tatttctaac tgttgttaaa tccctaaaag atttgttgag ttttgacaaa taaatgcacc
     5581 caataattac tttttgcgaa atccaaagta atatgtgtct ttttaataag caaaatgaat
     5641 tggaaacact ttaaacacct tttaaaatac ttttaatatc atcttttctt tgcaagtaca
     5701 aaagcacttg aaagtaagag cattccaaga ataaaccata aattagtttt cttagaatct
     5761 cccgtttgtg gcagtttttc cgattttttc acatttccag ctctttcatt agaagaaact
     5821 gataaagcgc tagttttttc atacacataa gttacttttt gtgagctatt caaaaatttc
     5881 cccgatgcat ttttaggtgt ttgatacaat ttatatcccg agattttttt ggccgaagtt
     5941 cgataacttg aatttaattt tcctgttaaa acaatcgaat cagctaattt ttcaccattc
     6001 ttatcgacat aatcgacaat gatgtttccg gctgtcactt tttgataaac aaaagtaact
     6061 gtctgtgctt tttcgttaaa tgttccactt acattcgcgg gtgtttttac aagggtgtag
     6121 ttagtaattt ttttctgttt tgcagtgaat ttttctccgt aagctcctgt taatgtttct
     6181 gggctggcaa tttgtttatg gttttgatca acatattgca ccgtaactgg cgcaacacta
     6241 tcatctaaag ccactcctac ttgggccggc tcaattactt gagaattatt tacagccaca
     6301 gcaaatgaat tccatgctgc tcggtcttct ttttttgttt gctgatttaa aaatccctta
     6361 tctatttggt ttttctttgg tgtttttaaa tcaaattgaa ttttcatgga tttcccagga
     6421 atccactcaa taccttcttt taattccatt ttaaaagagt aaattttgga ccaatcttgt
     6481 acttctgatg cggttaacca atctgcttcc gttgcttctg cgttatcaac tagaggctct
     6541 gaaccagttg gataaatcgt gtgcttatcg agaacgcccg cacgtttagg gtttttggca
     6601 gtactatatt ttacgtcaac cttatctttc cattcatttg gaattgccac tgctttcgtt
     6661 agctccaagt tgaatttact accacgttcg ctgttatctg taattcctaa atcattttca
     6721 cttggtaaaa catccattaa aaccatatta gctatttttt catctgaatc attttccagt
     6781 gacaattgat atgaaacaat ggaatttgtt gtggcatttg ccaatccgct gtattcttta
     6841 tcgcgattac ccttagcttt tttactaatt ttcaaatgat tactcgtatt taaaatgtaa
     6901 tggtttcccg atgtgattct agactcttcc gaattcccat tttgattaat gtcatctgag
     6961 tcaatttcca tttttgtatc agaaatggtt ggagttccag tcacttccgg cacattaaaa
     7021 tctgtctcct gcaagaaacc aaacatctca acagtcatat tactaggtgt gtcttttgca
     7081 acactcacat taatttttgc cgttaatttt tctgctggca aaagcgtctt tttatcccat
     7141 ttgactttta gtaattgacg ccctgcgttt tggtaattct cgttcaacac tgttacatta
     7201 aagtcgtttt gctccgtttt tttcattttg acccctgaag gtaacaaaac cactgcttca
     7261 aaaggacctt ttaatcgtga aatagaagct ttattgcttt ctaaattaac agaaatagaa
     7321 ttatcaccta tgttgattaa attcccatcg gtatcatcaa acgcaactga tccttgtaca
     7381 aatttatttt taccagtagg ttgcggaatt atttgcgctg ttcggtctcc tgcataattt
     7441 ttccaagctt ccggccaagg atttgtatcg tcataataat ggatatagcc ttgactatcc
     7501 gctccgtaca tgttgatttg tgtactattt ctaacctcac ctacataacc ttctttgact
     7561 gttgtaaaga aagatagatt agcagcatac attccagctg gagcatacgt gaaatgaagc
     7621 catactttac tcacgtgctt atcatctgga atcccaagat cttttctcga atacattttg
     7681 ctcagttcta catcttcttt tagtgtcgtc cagtcgctat caccatcata tttcacgagt
     7741 aaattatact taggtgattt ctttagttgc gcccaaccag ggtaattaac atttggttta
     7801 aagtaaaaat cgccgctctg gaagtaatcc aaatttaaat tatcatctat attgtagtaa
     7861 gcatcataat aaaggaagtc gtacgaaggt gaatcattca tcgccgaatt taacatcaaa
     7921 ctaaagccta atttagcagt atcatatgct tttatatcag gatttccggt cacagtagcg
     7981 attccccaat tcgcatccac cgggcctctg tgtgctggag cataaacact tccaatagtt
     8041 ggcgggattg tcgctgggtc acttgctgaa actgaaacag atgctttgga tgtatctaca
     8101 atgctatcag ccaaagtaac aaagttcgtt gttgcaacag ctttattttc caccgttgca
     8161 aaatttggta tagtagtttg gaagaacgtt ctaatttgga aagtcttgtt aagtaaactg
     8221 tttgcttttt cttgttccaa atatgtaggt gctgcaattt cccaagttag tttttgtcct
     8281 tcgaccttcg ttggttctgg tgtatctcct gctacaccta agtaatctag cttatctgcc
     8341 aatatatact caataacaat cttcttacct tcttccataa aaaggcttcc tgtagacttt
     8401 ttcggaatat ttaggttgaa agaccaaatc ccgatatcac cttgactcgg attattgttg
     8461 atgctatttt ctaccctagc aaaatcattt gataaagctg ttgtggctgt tgcgttgaca
     8521 gttgtttcag cctgttcggt tacttttcca agtaaattat ctgcacttaa ttcacctgtt
     8581 actactaatt tcgttccatt tggtgtgtag ccatttttcg tagtcagctt aagaatcact
     8641 ttatcaacta caccactgtt cagtgtttga tatgtgtaaa cgagctgacg agttgttttg
     8701 ttataacttg gcgtttctcc cgcaatctta agttcattta atgattgatt aaattcccca
     8761 ttttttggta aattgattac taatttagca ttttggtatg ttgtgtttgg tccagtaatt
     8821 tttaaataaa tgttatagtt taccgtctga ccagattcaa tcacatcttt ttgagaatta
     8881 atactaaagt cccctgaata attcccagtt ggaaatgatt ttgtgtttat tgcttcattg
     8941 actgtggtct cttttaaagg ctctgaagta gtttcatttg aagtcgtttc ctgcgtaacc
     9001 ttttctttcg tagttatttc ttctacgtcc gttccatccc tttcttgact atttgcccaa
     9061 actgaaaatg gaagaaatga aactatcagc aaagtacaaa ttaatataga tactaatttt
     9121 ttcaaatgac tcacattcgc ccctcctttg tttactcaag attaattatt tcataggagg
     9181 aagcagctaa atgttctcaa ggtacaaaaa ataggacagt ttgttacgaa aatgtgaact
     9241 attttacgtt tatagtcgca aaaatgtcat tattaacaaa aaacaaccaa aattgttgaa
     9301 gaattcaacg attttggttg ttttatttat cttattcgaa tcgattcgct ttcaactaat
     9361 ctagcaccct ttacttcctc accagatttt agtatctctg caattcgctt tttatcaatt
     9421 ttaggttctt gtagtaaaaa gaacgatttt agcaaagctt cttccactat ttccacactt
     9481 ggtggattct tttgtatttg aattgtaaaa agtgtactgt ttatttttct aatttccatt
     9541 cgttccatct ctgtttgtaa atagtttttt aaattttgaa cattattttc tagtgcttgt
     9601 tttcgtttta aaagtcgttt cgcttctatt cccgccattt cagca
//
LOCUS       DASDYK010000100         9632 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.100, whole genome shotgun sequence.
ACCESSION   DASDYK010000100 DASDYK010000000
VERSION     DASDYK010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9632)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9632)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9632
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.100"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(134..1234)
                     /gene="uvrC"
                     /locus_tag="U0308_002313"
     CDS             complement(134..1234)
                     /gene="uvrC"
                     /locus_tag="U0308_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit C"
                     /protein_id="HEM2317273.1"
                     /translation="MDDKLQKKLTLLPESPGCYIYRDENNEILYIGKSKCLKNRVKSY
                     FHSKQIGKTARLVRQIRDLELIITTSEKEALLLEMILIQKYQPPFNIQLKEGTSYPYI
                     KITNEKNPHIEVVFEVKRDGAHYFGPYPGRFSARQTVDLIEKLFPLCRCDGKPGRPCL
                     YYHLGLCLGPCQAEIDPVVYKKQIHKISRFLEGDVKNVKDKLLGDMLTATENLEFERA
                     AELRDKIHAINETIEKQHIIFPGLKNRDIIGCYEQDNHLSVFVFFVRNGAINGSKWHV
                     FQIEKSLQEDLAKFLNQFYKDPNNIRPKELLIAEKIDKSLLNEQLRKACLFPQKGGKK
                     KQVDLAIENAKSAYIAYAKMKEYDFEIQLNNH"
     gene            complement(1339..2442)
                     /locus_tag="U0308_002314"
     CDS             complement(1339..2442)
                     /locus_tag="U0308_002314"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEM2317274.1"
                     /translation="MNQLAPFYADHVGSILRTKGIKDAREKFQSGEITVSELRKIENT
                     EIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVEGYDAAGGIQFSKVQTKSHS
                     VKITGPIDFTTHPFIEDFIFLKEAVGDKHVAKQTIPSPAMLHYRGDIEYQPYLDDAEK
                     FAKDLAVAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPDTLQETYK
                     NLINDAIKYKPADMVITMHICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNE
                     RSGDFAPLKNVTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQC
                     GFASTEEGNILTEEEQWDKLRYVVRLAKDIWGE"
     regulatory      complement(2537..2634)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(2699..3076)
                     /locus_tag="U0308_002315"
     CDS             complement(2699..3076)
                     /locus_tag="U0308_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEM2317275.1"
                     /translation="MAKEIIQTSSAPKALGPYSQAVKVNGLIFTSGQLGINPETGELA
                     DGTTKQAEQAFKNIAAVLAEAGSGLDKIIKATVFFKDLNEFKAVNEVYATFFSSDFPA
                     RSAFQVAKLPLDAAIEIEVIAEA"
     gene            3155..3412
                     /locus_tag="U0308_002316"
     CDS             3155..3412
                     /locus_tag="U0308_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HEM2317276.1"
                     /translation="MILTIYLIAITLVSFLLFAVDKRKAIKHAYRIPESVLLFTAFLG
                     GAFGSWMSMQLFHHKTQKPKFRILVPLAMVWTVGMVIWWLY"
     gene            complement(3550..9591)
                     /locus_tag="U0308_002317"
     CDS             complement(3550..9591)
                     /locus_tag="U0308_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003733402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterial Ig-like domain-containing protein"
                     /protein_id="HEM2317277.1"
                     /translation="MAFFLVLGQLNLTALKVFAKENGNDELTYEVQSKLAEDKKSADL
                     TIKVTPKNDQVKILTIETPDGEKKEGQEVSYKAEKNGTTNFLINYQDASEEKAETKKY
                     TASYEVNDIVSDDEANKDNTTEKVTEKEADNIQPPSTKDSNKNLKSLKAGQTTVDLKI
                     PDYDQTAWANGDIKEVTATVNFGDNTSTGKKVNFTLPDGMRFVSLPVPSNYQAGSNVD
                     KGVLSHLGASDPLGIAITSVKVPDKEKAYNQATFGTVSYELSPGTEKASFTFSVRVDA
                     AKYYGAVDLATPIKTEIFMGETTSPVASAEQAIHAEGNKVVGYTNQDHVKTMFRTWYS
                     NQRLTEVLASTDTTDSYNYTKSYSVVNGLNNLDNRGSAYYLAKNIEMTLYYPEGMEFV
                     NVVNHGGTPLTDNSNLTITNYPSENKVVVDCKQLNFNSANNSIYGVKYKVPKGTPVGT
                     YSTAKAPHAVITTYDGEVFETDALTNNTNDLTTLAPLDTCKVVDTSNNKMNLFSANGT
                     INPDNETWAGSIQIDNKRTSGVKKNQMYHIEFDPNWEAYMVNIPFDSTISENKITDVQ
                     YKTNLNDTFRTYEGALTKNNNQMYRLDANAVELQEGEYFTEVKANVGDFSPGYQNTEA
                     SATYRWNSTVSYGKVKPGITSVQYKGSIWDADDEAETKSSATSTYSVLNTESTAANGT
                     AAFYDKAGNVVKTASPGETIKTKATLLLSDYPYGTRTVLNNPEVYLRALEGTKVLPSS
                     IKLTDQDGKDVNFSIQQETANNGDKVYVLKTTDVSVGAFTGYPAKSKFLNISYDTTFD
                     VTLAKSINMDAQEVLAWGGPNVASAIANNNFSDVGLDVNKNGKDNEKLLSVNSSTLSV
                     PKQDTVAVETFLSIAGEGEKAAYTEGDDSTVSYFTPGTDAEYTVQITNASNGEATTFE
                     LYIPIPKTGQNFGEKFQSEAFKWDMKLNSALAINDEQKNQFEVSYATQANENNYDSTS
                     IYTETVSDYEKVNMVRIKVKTQINAGEAQTFKVPLKVDETFDSATEGNKIGERDVYNP
                     FYRVITNTFSGSLSGTKVGAELVIGEVSGTLFNDKDVNGIYEKAKGDEPLANETVELY
                     KWNDATSNYEPAKKAGENVTTKTNSDGKYSFDYNSGVGYGNYAVKFPDKAGYQFTLKN
                     VGKDVTLDSDVPYSGAEKGWNKEIDPTQPNAQYINAGYYAYNPTQDLKVNLNEKQVQM
                     GRSLEITLPKVASTTGQAAEDTIEPSFFKNIKAATNGYKWTVADTNVATVQTLADGSA
                     AVVGVSTNNKTIDVTDLTITIQDIFGTEQSSTAPVYVTGTEGQVAQQDGYTMGATDFS
                     MEYKEATELTKAQALTLAKTAAFEEVKDGVNSSAEDRLDSVQVSQTQLDAIKNGSNQG
                     SVYPLTYSITKDSKTVSVTIQVTVAKDLTAVNAHDSTIYIGDAWEAKDNFDSATNKEG
                     ATDIAFSDVTVTGSVNTAVAGVYPVTYTYNGVSKKINVTVKAIKTAVNAHDSTIYTGD
                     TWNARDNFDSALDKDGNSVAFADVTVTGSVNTNETGTNTITYSYDGVSQTITVTVVEN
                     KEGISAHDSTIYAGESWNAKDNFDSAFDKDGNAVDLEDVTVTEKPTVDTTKAGAYEVT
                     YKYGKVSKKITLTVKAKLTAVNAHDSAIYIGDTWSAEDNFDSALDKDGNSVAFADVEV
                     KGTVDTDKAGTYPVTYTYDGVSKTINIQVKDILTAVNAHDSEIYIGDNWNAKDNFDSA
                     QDKDGNTVNWNEINVSENPAVDLETVGVYQVTYSYGGVSKTINLTVHPRKTSLEVHDS
                     TMYTGDKWKAEDNFDNATDKKGDQIPFKDVTVTGQVDSKTAGTYEISYIYDGLKKVAR
                     ITVIKNQAQITVKDSVIPYGGKWEAEANFIGATNRDGVAIPFSKIKVDGTVDVNKAGT
                     YKVIYTYDPNEGTADAGKKELSVTANIQVEAEFVKPIKPVDPSKPTDPKKPSTEKTPL
                     KVVDNKQHTATYEAAKPLPKTGDQTNNWVIWTGICLLSMSMLLWVVMRGRKKNYQ"
BASE COUNT         2514 a         1942 c         1636 g         3540 t
ORIGIN      
        1 aaatgtttta tgtagcataa attttttccg tactcgtaag attttaccat aagggtaggt
       61 tattgaccat agttatttaa gataagattt tcaacacaac aaagagaaga agctaatcgt
      121 taaaaattag cttctaatga ttgtttagtt gtatttcaaa atcatattct ttcatttttg
      181 cgtatgcaat ataagcactt ttcgcatttt cgatagccag gtctacttgt ttcttcttac
      241 cgcctttttg tggaaataaa caagcttttc taagctgctc attcagtaag ctcttatcta
      301 ttttttcagc gattaacaac tcttttggtc gaatattgtt aggatcttta taaaattgat
      361 tgagaaattt ggctaaatct tcttgaaggg atttttcaat ttggaaaacg tgccatttac
      421 ttccattaat tgcgccattt cgaacgaaga aaacgaagac acttaaatgg ttatcttgtt
      481 catagcaacc aatgatatcc cgatttttta ggccaggaaa aataatatgt tgcttttcga
      541 ttgtctcatt aatagcgtgt attttatctc gaagttctgc cgccctttcg aattcaagat
      601 tttcggttgc agttaacatg tcccccagta gtttatcctt cacatttttc acgtcgcctt
      661 caagaaaacg actaatttta tggatctgtt ttttataaac taccggatca atttcggctt
      721 ggcatggacc taagcacaat ccaagatggt agtacaaaca tggtcgtcct ggcttaccgt
      781 cacatcgaca aagtggaaac aatttttcaa ttaggtccac cgtttgtctt gcggaaaaac
      841 gacctggata aggaccaaaa taatgcgcgc cgtctcgctt tacttcaaac acaacttcga
      901 tatgcggatt tttttcgttc gtaattttga tatatgggta gctcgttcct tcttttagct
      961 ggatattaaa aggtggctgg tatttttgaa ttaagatcat ttcgagtagt aaagcttctt
     1021 tttcggaggt tgtaataatt aattctaaat ctcgaatttg cctaacaagt cttgcagttt
     1081 tcccaatttg tttgctatga aaataagact ttacacggtt tttcaaacat ttagatttac
     1141 caatataaag aatttcatta ttttcatctc tataaatata acaacctggt gattcaggta
     1201 ataaggtcaa tttcttttgt aatttatcgt ccaaagggct ccccctcctt ctagaacatc
     1261 tattctatcc ctagtcatcc tttttgtaaa gacacaaaaa gaactagcac aaactcttcg
     1321 gctagttctc ctcatttatt attcgcccca gatatctttc gcaagccgga caacatatcg
     1381 caatttatcc cactgctctt cttccgtcaa aatattgcct tcttctgtcg aggcgaaacc
     1441 gcattgcggg cttaagcgca actggcttag aggcacaatt tcactcgctt cttcaatccg
     1501 tgctttaatg gctgcctcgt cctctaattc acctgttttg gatgtaatta agcctagaac
     1561 gattttcaag tctggacggg tgacattttt tagtggcgca aaatctccag aacgttcatt
     1621 atcatactcc aaaaagaaac catcgatatt tagtttgcca aataacgttt ctgcaacggg
     1681 gccatagccg ccctctgcaa tccaagtgga gcggaaattc ccacgacaaa tgtgcatcgt
     1741 aatgaccata tcagctggtt tatatttgat agcatcattg ataagatttt tatatgtttc
     1801 ttgtaaagta tctgggtcaa aacctctctg gcgaacgact tcacgctgtt catcagagca
     1861 taaataactc cacgacgtat catctaattg caagtaccga caaccggcat cataaaatgc
     1921 ttgaatcgct ttttgatacg caacagctaa atctttggca aacttctccg catcatctaa
     1981 ataaggctga tactctatat ccccacgata atgaagcatc gctgggcttg gaatagtttg
     2041 tttcgcgaca tgcttgtcac ccacagcctc tttaagaaaa ataaaatctt ctataaatgg
     2101 atgtgtcgta aagtcaattg gtccggtaat ttttaccgaa tgtgattttg tttggacttt
     2161 gctgaattga atacctccag ccgcatcgta cccttctacc ccgtccaaat tttccaagaa
     2221 gtcaaaatgc caccacgcac gacgaaattc gccatctgtg attgatttta agcccacttc
     2281 tttctgtttt tcaacgatat atttaatttc tgtattttcg attttgcgca actctgagac
     2341 tgttatttca ccactttgga atttctctcg tgcgtcctta attccctttg ttcttaatat
     2401 acttcccaca tgatctgcat aaaatggtgc tagttgattc attttcttcg cctcaattct
     2461 cattattttt atgtataaaa aaactttccc ttaaaagaca gcttttaagg gaaagagtaa
     2521 tttacctgat tcgcgtgcct tatctgtcag tgttacctgc tggatttggc accgtgaaac
     2581 ttccggttgc caaggcttca cggggccaga accctccacc tttcttgata agttgctatg
     2641 taattggttc ttattatatc gtttatttct tgtggttgtc aaatttattt ctgaatattt
     2701 atgcttctgc gataacttcg atttcaattg cagcatcaag cggtaatttt gctacttgga
     2761 aagcacttct cgcgggaaaa tcactagaaa agaatgtcgc atacacttca ttcacggcct
     2821 taaattcatt taaatctttg aagaaaacag ttgctttaat aattttgtcc agtccagaac
     2881 cagcttctgc taatactgct gctatatttt taaaagcttg ctcggcttgt tttgtcgtgc
     2941 catctgctaa ttcgccggtt tccgggttaa taccgagttg acctgatgta aaaataagtc
     3001 cattcacttt tacagcttgc gagtatggtc caagtgcttt tggggctgac gatgtttgaa
     3061 taatttcttt tgccatttta tccctgcttt cttttatggt atgcttttat tctaatcaat
     3121 aaagtttgtt ttagcaatga agggggattt ctaaatgatt ttaacgatat atttaatcgc
     3181 gataacgctt gtttcttttc tattattcgc tgttgataaa cggaaagcaa ttaaacacgc
     3241 ttaccggata cctgaatctg tactgctttt caccgctttt cttggtgggg cgtttggtag
     3301 ctggatgtcg atgcaactat ttcaccataa aacccaaaaa ccaaagttcc ggattttagt
     3361 gccgcttgcg atggtttgga ctgttggaat ggtgatttgg tggttgtact gaattaacaa
     3421 atcagtagca ttacctcaaa aaaacatcaa ttaacttcta tatttctcga taaaaaaata
     3481 ccgaccagaa aaatctggtc ggtatttagt ttaccttctt attgtctttc ctttatctgt
     3541 tggttcctct tactgatagt ttttctttct tcctctcatt accacccata gaagcatgct
     3601 catacttagc aagcaaatgc ctgtccagat tacccaatta tttgtttggt ctcctgtttt
     3661 tggtaatggt tttgctgctt catatgttgc agtatgttgc ttgttatcaa ctactttcaa
     3721 tggtgttttt tctgttgatg gttttttagg atctgttggt tttgatgggt caactggttt
     3781 tataggtttt acaaattctg cttctacttg aatattagct gtaacagaaa gttctttctt
     3841 acctgcatcc gctgttcctt cattcggatc atacgtataa atcactttgt acgtaccagc
     3901 tttatttaca tctactgtac catctacttt aattttggag aaaggaattg ctacaccatc
     3961 tcggtttgtc gcacctataa aattagcttc tgcttcccat tttcctccgt atggaatgac
     4021 gctatctttt acagtgattt gtgcttgatt tttgattaca gtaattcgtg ctactttttt
     4081 caatccatca tagatatagc ttatttcata cgtgcctgct gttttagaat caacttgtcc
     4141 ggttacagtt acatctttga aaggaatttg gtcacctttt ttatctgtag cattatcaaa
     4201 gttgtcttct gctttccatt tatctcctgt atacattgtg gagtcatgga cttctagact
     4261 tgtttttctt ggatgaacag tcagattaat tgtcttcgaa acaccgccat aactataagt
     4321 cacttggtaa acaccaactg tttctaaatc aactgctgga ttttccgaaa cattgatttc
     4381 attccaattt actgtgtttc cgtctttatc ttgggcactg tcaaaattat ctttggcatt
     4441 ccagttgtcc cctatataaa tttcagaatc atgcgcgttc accgctgtta agatgtcttt
     4501 tacttggata ttaattgttt ttgagacacc gtcatatgtg tacgtgactg gatatgttcc
     4561 agctttgtct gtatcaacgg ttcctttaac ttcgacatca gcaaaagcga cagaattgcc
     4621 atctttatcc agcgcactgt caaagttatc ttctgcactc cacgtatctc cgatgtaaat
     4681 cgcggaatca tgtgcgttga ctgctgttaa tttagctttc actgttaaag tgattttttt
     4741 cgatactttt ccatatttgt aagtgacttc gtaagcacct gcttttgttg tatcaacggt
     4801 tggtttttct gtgactgtaa cgtcttctag gtcaaccgca ttcccatctt tatcaaaagc
     4861 gctgtcgaaa ttatcttttg cattccatga ttctcctgca tagattgtag aatcatgtgc
     4921 actgatacct tctttatttt ctacaacagt aactgtaata gtttgagaaa cgccatcgta
     4981 gctataagtg atagtatttg taccagtttc atttgtatta acgcttcctg tcactgttac
     5041 atcagcaaag gcaacagaat taccatcttt atcaagcgca ctatcaaagt tatctctcgc
     5101 attccatgtg tcacctgtat agattgtgga atcatgtgcg ttcactgctg tttttatagc
     5161 tttgacagta acattaattt ttttagagac gccattgtaa gtgtaggtca ctggataaac
     5221 accggctact gctgtattca cacttcctgt aactgtcaca tcgctaaacg ctatatcagt
     5281 ggcaccttct ttatttgtcg cactatcaaa gttgtctttt gcttcccatg catctcctat
     5341 ataaatagta gaatcatgtg cgttcaccgc tgttaaatct ttcgctaccg ttacttgaat
     5401 agttactgag acagttttgc tatctttagt tatcgagtaa gttaatggat acacactacc
     5461 ttggttggaa ccatttttta ttgcatctag ttgtgtttga ctcacttgta ctgaatctaa
     5521 acgatcttct gcgcttgaat taacaccatc ttttacttct tcaaaagcgg ctgttttcgc
     5581 gagagttagt gcctgagctt tcgttaattc agtggcttct ttatactcca tcgaaaagtc
     5641 agtcgcaccc atagtgtaac cgtcttgttg cgcaacctgt ccctcggttc cagtaacata
     5701 tactggagct gtggagcttt gttctgtacc aaaaatatct tgaattgtaa tcgttaaatc
     5761 cgttacgtca atcgttttat tgtttgtgga aacacctacg acagcagctg atccatcagc
     5821 taacgtttgt actgtcgcta cattggtatc tgcaacagtc catttgtagc catttgttgc
     5881 tgctttaata ttcttaaaga agcttggttc aatggtatct tcggcagctt gtccagtggt
     5941 tgaagctact tttggtaaag tgatttctaa gctgcgaccc atttgaactt gtttttcatt
     6001 taagttaact tttaaatctt gcgtaggatt ataagcatag tatcccgcat tgatatattg
     6061 tgcgtttggt tgtgttggat caatttcttt attccaacct ttttctgcac cgctgtatgg
     6121 tacatcactg tctaatgtga catcttttcc tacatttttc aacgtaaatt gataacctgc
     6181 tttgtctggg aatttcacag cataattacc atagcctaca ccagaattgt aatcaaagct
     6241 gtatttccca tcactattag ttttagtagt tacattttct cccgctttct tagcaggttc
     6301 ataattagag gttgcatcat tccacttata aagctccact gtttcattag ctaatggttc
     6361 atcacctttt gctttttcat aaatcccgtt aacatctttg tcattaaata atgttcccga
     6421 aacttcgcca atgacaagtt cagcccctac ttttgttcct gataatgaac cagagaaagt
     6481 attggttatt actcggtaga aaggattgta aacatcacgt tcaccaatct tattcccttc
     6541 cgtcgcagaa tcaaaagttt cgtctacttt aagtggaact ttgaaagttt gtgcttctcc
     6601 agcattaatt tgcgttttta ctttaattcg aaccatattt actttttcat aatctgacac
     6661 tgtctctgta taaatactag ttgagtcata attattttca ttggcttgcg ttgcatagct
     6721 cacttcaaat tgatttttct gttcgtcatt aattgcaagt gcgctattta acttcatgtc
     6781 ccacttaaat gcttcacttt ggaatttttc tccgaagttt tgaccagttt ttgggattgg
     6841 aatataaagt tcaaaagtgg ttgcttcccc attagatgcg ttagtgattt gaactgtgta
     6901 ttcagcatct gttcctggtg tgaagtaaga aactgtacta tcatcgcctt cagtataagc
     6961 tgctttttct ccttctccag ctatgctcaa gaaagtttcc actgcaacgg tgtcttgttt
     7021 tggaacactt aaagtactac tgttaacaga aagtaatttt tcattgtctt tgccattttt
     7081 attaacatct agacctacat ctgaaaagtt attattggca attgcggaag caacattggg
     7141 gccgccccat gcaaggactt cttgtgcatc catattgata ctcttagcta atgttacatc
     7201 aaatgttgtg tcgtaactga tatttagaaa tttactctta gccgggtatc ccgtaaatgc
     7261 ccctacggaa acatccgttg tctttaatac ataaacctta tctccattat ttgccgtttc
     7321 ctgctgaatg gagaaattaa catctttccc atcttggtct gtcagtttaa tagaagaagg
     7381 cagaactttt gtaccttcta aagcacgtaa atatacttct ggattattga gtacagttct
     7441 agtcccataa ggatagtctg ataaaagtaa tgttgctttt gttttaatgg tttctcctgg
     7501 actagctgtt tttactacat taccagcttt atcgtagaaa gcagccgtac catttgctgc
     7561 ggtactttct gtatttaaaa cactataagt tgatgtcgca gaagattttg tttcggcctc
     7621 atcatcagca tcccaaatgg aacctttata ttgaactgat gtaattcctg gcttaacttt
     7681 tccgtacgaa acagttgagt tccaacgata ggtagccgag gcttctgtat tctgatatcc
     7741 aggtgaaaag tctcccacat tcgctttcac ttctgtgaaa tactcacctt cttgaagctc
     7801 cactgcgttt gcatctaagc gatacatttg gttattattt ttagtgagcg ctccttcata
     7861 cgttcggaat gtgtcgttta aatttgtttt atattgaaca tcagttattt tattttctga
     7921 aatggtgcta tcaaaaggga tattgaccat gtaggcttcc cagttaggat caaattcaat
     7981 gtgatacatt tgatttttct tcacaccaga tgttctttta ttatcgattt ggatactacc
     8041 agcccaagtt tcgttatccg ggttgattgt tccatttgct gaaaataaat tcattttatt
     8101 attggaagta tcaactactt tacaagtatc tagaggagct aaagtagtta aatcattagt
     8161 attgttagtt aatgcatcgg tttcgaatac ttctccatca tacgttgtga taaccgcatg
     8221 tggcgctttt gcagtgctat aagttccaac aggcgttcct ttaggcactt tatatttgac
     8281 tccgtaaata gaattattcg ctgagttgaa atttaattgc ttacaatcaa ctacaacctt
     8341 attttcactt ggataattag taatagttag gttggaatta tccgttaaag gcgtaccacc
     8401 atgattcaca acgtttacaa actccatacc ttctggataa taaagcgtca tctctatgtt
     8461 ttttgctaga taatacgctg atccacggtt gtctaaatta tttaatccat tcacaacaga
     8521 gtaagatttt gtatagttat aagaatctgt tgtatctgtg cttgcaagta cttctgttag
     8581 cctttgatta ctataccaag ttcggaacat agttttcaca tgatcctgat tcgtataacc
     8641 tacaacctta tttccttccg catgaatcgc ttgttccgcg gaagcaactg gtgaagttgt
     8701 ctcacccata aaaatttctg tttttattgg agtggctaag tcaactgctc cgtaatattt
     8761 tgctgcatct actcgtacag aaaaagtaaa gctcgctttt tcagttcctg gacttagctc
     8821 ataactaact gttccaaaag tggcttgatt atatgctttt tctttatcag gtacttttac
     8881 cgaagtaatg gctattccta gtggatcact tgcccctaaa tgacttaaaa cccctttgtc
     8941 tacattcgaa ccagcctgat agttgctcgg cactggcaaa gaaacaaaac gcattccatc
     9001 tggtaaagtg aaatttactt ttttgccagt agaagtattg tcgccaaagt ttactgttgc
     9061 agttacttct ttaatatcac cgtttgccca tgctgtttgg tcataatcag gtatttttaa
     9121 atcaaccgtt gtttgtcctg ctttaagtga ttttagattt ttgttactat ctttagtaga
     9181 aggaggttga atattatcag cttctttttc agttaccttc tctgttgtat tatctttatt
     9241 tgcttcatca tctgaaacta tatcatttac ttcataagaa gcagtatatt ttttagtttc
     9301 tgctttttct tcgcttgcat cttgataatt aattaagaaa ttagttgtgc catttttttc
     9361 ggctttatag cttacttctt ggccttcttt cttctctcca tcaggtgttt caatggtaag
     9421 gattttcacc tgatcgtttt ttggtgttac tttaatggtt aaatcagctg attttttatc
     9481 ttcagccaat ttggactgaa cttcataagt tagctcatca ttcccatttt cttttgcaaa
     9541 aaccttaagc gctgttaaat ttaattgtcc tagtactagg aaaaatgcca ttaacagtac
     9601 gaggtaatgc cgtgctctag ttgctttaat ca
//
LOCUS       DASDYK010000101         9226 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.101, whole genome shotgun sequence.
ACCESSION   DASDYK010000101 DASDYK010000000
VERSION     DASDYK010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9226)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9226)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9226
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.101"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..498
                     /locus_tag="U0308_002318"
     CDS             <1..498
                     /locus_tag="U0308_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5105 domain-containing protein"
                     /protein_id="HEM2317278.1"
                     /translation="YGEDGSKFEKEFETSFKESFISTFTASFSSDVNLDKQVDEFYDA
                     LRKQVNEKTSYTTKVTNDDKESPEIQFAVKGLDMKGVQTELVEELTKAATADPSLATD
                     DQKMAEKTMEIYTKAVQNADAVSEAKTVTLKLKADPDDDSLWKMENDMAFMQELTTAF
                     FMGGM"
     gene            604..1494
                     /locus_tag="U0308_002319"
     CDS             604..1494
                     /locus_tag="U0308_002319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEM2317279.1"
                     /translation="MNTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPE
                     MWSNGYAPPFEDAFNHPLATDFDNERTKWLNEAITEDSAYFLTLKELAKELKIGICAT
                     YLSKTEQKPQNTAIIIDRKGEIILDYAKVHTCDFSLEILLQSGEEFKVCEFDGIKLGG
                     MICYDREFPESARVLMLKGAEIILVPNACDMNPARLNQLNSRAFENMVGVAMANYPGE
                     KWGRSTAFSPIVFDENGDYRDNTIIETDDVSEGIFIAEFNLDEIRTYRENETWGNAYR
                     KPQTYTDLISLDVEAPFKRN"
     gene            complement(1529..2230)
                     /locus_tag="U0308_002320"
     CDS             complement(1529..2230)
                     /locus_tag="U0308_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HEM2317280.1"
                     /translation="MVLLGALVNGLGILIGSVIGMKLHNIPERMKDTVMKGMGLSVIV
                     LGIQMAFKTSNSLIVILSICFGAVIGEWLNIDYHLNQLGHWIERKVGAKGKSNVSKGF
                     VTATLIFVIGAMGIIGALDSGIRGNHDVLYTKSVMDGFIALLLSTTLGWGVMLSAIPV
                     FLFEGIIALFATQINQFVPADLMALIIKELTATGGIMILAIGLNLLGLTKIRVANLVP
                     GILVVALIVTGLYYF"
     gene            complement(2345..2986)
                     /locus_tag="U0308_002321"
     CDS             complement(2345..2986)
                     /locus_tag="U0308_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEM2317281.1"
                     /translation="MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDI
                     NILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVG
                     GAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFE
                     PGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNERFTVAGK"
     gene            complement(3070..3990)
                     /gene="rarD"
                     /locus_tag="U0308_002322"
     CDS             complement(3070..3990)
                     /gene="rarD"
                     /locus_tag="U0308_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HEM2317282.1"
                     /translation="MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYR
                     IIWSFIFMLFLIVCLRKASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNS
                     GHVTEASLGYYINPLVNVLLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAA
                     IGMAVTFSLYGLIKKVVSVSVWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNII
                     LVGAGVVTAIPLLLFATAAKKISYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAF
                     MFIWLALIIFTISHIYSAAKIKQLANAAKK"
     gene            complement(4099..4629)
                     /locus_tag="U0308_002323"
     CDS             complement(4099..4629)
                     /locus_tag="U0308_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HEM2317283.1"
                     /translation="MTVEKWNVDPAHSSIEFQVKHMMVSKVKGAFSDFTADIEMDPED
                     LTSAKLNFYVAAASVDTRQAQRDGHLKSEDFFNVEKYPNVTFSATKITADGDDEYEVT
                     GDLTIRDVTKPLTLEVSYEGTGKDPNTGNMVAGFEAKGKFNRKDFGLNYNAALETGGV
                     LIGDEVKLNIQIEASK"
     gene            4885..5346
                     /locus_tag="U0308_002324"
     CDS             4885..5346
                     /locus_tag="U0308_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2317284.1"
                     /translation="MVGINTDTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLA
                     MINVIYSTPGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKL
                     SKKGEDLSKRSTANAFMYKAMMKVFENLTENEIEELIRLNKKVETLLKKSK"
     gene            complement(5398..6858)
                     /locus_tag="U0308_002325"
     CDS             complement(5398..6858)
                     /locus_tag="U0308_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEM2317285.1"
                     /translation="MKKETHGEIRRDLKTRHLSMIAIGGSIGTGLFLASGNAIHTAGP
                     GGALVAYIAIGIMVYFLMTSLGEMATYMPVSGSFSTYASRFVDPAFGFALGWNYWFNW
                     AITLAVDISTAAIIVQFWLPNTPAWLWSAIFLILIFGLNALSVKAYGESEYWFSIIKV
                     ATVIIFLIVGVLTIVGILGGEVIGFSNFTAGDAPFKGGFFAILGTFLIAGFSFQGTEM
                     VGIAAGESATPETSVPKAIKQVFWRILLFYIFAIFIIGMIIPYTNPNLLSAEATDVAI
                     SPFTLVFEKAGLAFAASVMNAVILTSVLSAGNSGLYASTRMLWAMARDKKAPKFLGKV
                     NRRGIPMAALIVTTIVGAMTFITTLTENGTVIYTWLLSASGLTGFIAWVGIAISHYRF
                     RKAFIKQGHDLSELKYKAKFFPFGPILALILCILVIVGQDYAAFLKPEFTNPAWWQKI
                     GISYIGLPIFLVFWLSFKFTNKTKVIPLEDCKFDQK"
     gene            complement(7214..7975)
                     /locus_tag="U0308_002326"
     CDS             complement(7214..7975)
                     /locus_tag="U0308_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="blue-light photoreceptor"
                     /protein_id="HEM2317286.1"
                     /translation="MTAYPQFDVILKALNLSSVGVIITDPEQKDNPIIFVNTGFENIT
                     GYAKEEALGSNCHFLQGDDTDKKEVAKIRHAINEKSTANVLLKNYRKDGTSFMNELTI
                     EPIYDDHNHLYFVGIQKDVTTEHDYQLELEKSLTEIEKLSTPIVPIKENICVLPLIGS
                     LTHDRFQHMSEYVSEYMDHGKEDYLIMDLSGLAEFNEDAVMNLVKFHGFMKLTGVELI
                     ITGISPKFAMTLIRYEENLASLTTYSTIKEALQFY"
     gene            8128..8481
                     /locus_tag="U0308_002327"
     CDS             8128..8481
                     /locus_tag="U0308_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317287.1"
                     /translation="MYITFTDSAKNRLAALRSNLEGRLHLYYDTEGCSCENSGIFTLR
                     LVEEKTAEDDEIESNIGPVLIKRWTEMFLEEALTIDYNDTEKTMILKSDGQYYNRNLL
                     LVTNTDEVISCPVTS"
     gene            8636..>9226
                     /locus_tag="U0308_002328"
     CDS             8636..>9226
                     /locus_tag="U0308_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HEM2317288.1"
                     /translation="MEQPSVDELKNWRNVMLLHRFALEEVNTKLKILNEEFQFIHDYN
                     PMEHLKSRVKSLESIGAKLEKKKVDITPENALKYVHDIAGIRITCSFVSDIFRIHEML
                     AGQSDITIKRVKDYVTNPKPNGYRSLHLLCEVPVFLTNRSEKMTVEIQIRTVAMDFWA
                     SLEHKIYYKYQQEAPIELVKELQDAARIITHLDEKMK"
BASE COUNT         3089 a         1726 c         1724 g         2687 t
ORIGIN      
        1 tatggtgaag atggttctaa attcgaaaaa gaatttgaaa ctagttttaa agaaagcttt
       61 atcagtacat ttacagcaag cttttctagt gatgtaaact tagacaaaca agtggatgag
      121 ttttatgatg cacttcgcaa acaagtaaac gaaaaaactt cgtatactac taaagtaaca
      181 aatgacgaca aagaaagtcc agaaattcaa ttcgctgtta aagggcttga tatgaaaggc
      241 gttcaaacag aattagttga agaattaaca aaagcagcaa cagctgatcc atctcttgca
      301 acagatgatc aaaaaatggc tgaaaaaaca atggaaatct atacgaaagc tgttcaaaac
      361 gcagatgcag tatcagaagc taaaacagtt acacttaaat taaaagcaga tccagatgac
      421 gattctttgt ggaaaatgga aaatgacatg gcattcatgc aagaattaac aacagcattc
      481 tttatgggcg gcatgtaagc ttttatatgg caaaacacca ataactttcg ggttgttggt
      541 gtttttttgt ttccaagaat aaatgttata ataacataaa gatttactaa tgggaggcgc
      601 tatatgaata ctataaaaat cgcattaatc caacaaaaag cagtaccaaa taataaggaa
      661 gccaatttga aattagccat taaatatata aaagaagcgc atgaaaaagg agcagattta
      721 gtacttttcc ctgagatgtg gtcaaatggt tatgcgccac cttttgaaga tgcttttaat
      781 catccactag ctactgattt tgataatgaa agaaccaagt ggttaaatga agctatcaca
      841 gaagacagtg cgtatttttt gacactgaaa gaacttgcca aagagttgaa gattggcatt
      901 tgcgctacgt atttgtctaa aacggaacaa aaaccacaaa atactgctat tattattgac
      961 cgaaaaggag aaataatttt agactatgcc aaagtccata cgtgtgattt ttctttagaa
     1021 atattactac aaagtggcga ggaatttaaa gtttgtgagt ttgatggtat taagctgggg
     1081 ggcatgattt gctatgaccg cgagtttcca gaaagtgcca gagttctcat gttaaaaggg
     1141 gcagaaatta tcctcgttcc aaatgcttgt gatatgaatc cagccagact taatcaacta
     1201 aattctcgtg cttttgaaaa catggttggc gtagcgatgg caaactatcc tggcgaaaaa
     1261 tggggcagat ccactgcttt ttccccgatt gtttttgatg aaaatgggga ttaccgcgat
     1321 aatacgatta ttgaaacaga cgacgtttca gaaggtattt ttattgctga atttaattta
     1381 gacgagattc gaacttaccg ggaaaatgaa acgtggggaa atgcctaccg aaaaccgcaa
     1441 acatatacag atttaataag tttagatgta gaagcgccat ttaaacgaaa ttaaaaaaac
     1501 agagatgagc gattctctgt tttttctttt aaaaataata aagcccggta acaatcagcg
     1561 caacgactaa aatccccgga acaaggttcg cgacccgaat cttggttaaa ccaagcaagt
     1621 ttagaccaat tgccaaaatc ataatcccgc ctgtagccgt taattccttt ataattagtg
     1681 ccatcaggtc tgccggaacg aattgattaa tctgggttgc gaataacgcg ataatgcctt
     1741 caaagagaaa cactggaatc gcagaaagca taacgcccca accaagtgtc gtactaagaa
     1801 gtagggcgat aaatccatcc atcaccgatt tcgtataaag tacatcatga ttgccgcgaa
     1861 tgccgctatc aagcgcacca ataatcccca tcgcaccaat cacaaaaata agtgtagctg
     1921 tcacaaagcc ttttgaaaca ttactttttc ccttggcacc gactttacgt tcaatccagt
     1981 gcccgagctg attcaggtga taatctatat taagccattc cccaataacg gctccaaaac
     2041 aaatacttaa aatgacaata agcgagttgc tcgttttaaa tgccatttga atgccaagga
     2101 cgataacgga taaacccatc cctttcatga ccgtgtcttt catacgttca gggatattat
     2161 gtaatttcat gccaataaca gagccaatca aaatcccaag cccattcact agcgcaccaa
     2221 gtagaaccat tttcttcctc ccttttttta catatagcaa tagtatacag gaagttttcg
     2281 ccaattggga gttttatttt gtacaaaaaa gtcgaaggat caaagtgatc cttcgacttt
     2341 aagtctattt tccggctact gtaaagcgtt catttaagtg attaggtcgt tcaatttcat
     2401 ctaaaacagc aattgcatag tcttccatac tgataaaact attaccatcg ctaccaaata
     2461 agagatgatc ttttcctatt tgatagtctc cagtgcgttc gccgggctca aacatggcag
     2521 aagggctaat gtaagtccaa ctgaattctg cttgatgtga ttttaaatgc tctaattgtt
     2581 tcgcttgcgc acgtgcagtt ggatagtaag gcgcttcccg taggcccttg gactctaaaa
     2641 gcgtgtttcc gtcttcatca atttgcagac tagctgctcc gccaacgaca agtaagcgcg
     2701 gagacacagt tccatttaaa acagaaatta agtgatcaag ggaagtgaca tgtttttctg
     2761 cttcgtctgg actgatgcca taagcatcaa caacgacatt ttggtctgat aaatctgaaa
     2821 gagttaaatc aaaaatatct ttttgtaaaa tattaatatc tttgtgtgtt tgcgtgattt
     2881 tcccggcgtt tctaacaatg gctgttactt cgtgaccgcg attttttgct tcttctaaaa
     2941 ttctcgaacc agctcggccc gtagcaccaa tgataccaat tttcatgaaa aaagccccct
     3001 attcattttt atggaataga ttctcgtttg atagaagaat tattcccgaa agaggggact
     3061 gggaaacatt tatttttttg cggcgtttgc taattgttta attttggctg cggaataaat
     3121 gtgagaaatc gtgaaaataa tcagtgctaa ccaaataaac atgaatgcaa acaattgaat
     3181 atgatcgaaa ctttctttaa atagtaatac gccgagtgcg agcattaatg ttggtccgat
     3241 atattgcagg aagccaacca ttgtatagct aatttttttc gcagcagtgg caaacagaag
     3301 gagtggtata gctgtaacga caccagcgcc aactaaaata atattggttt gtgccgcgta
     3361 ctgcattaat ccattggtcg cgaaaaagat tacataaata agcgcgaatg gcgtaataat
     3421 cattgtctca agggttaaac cagtccaaac agatacggaa acgacttttt taattagccc
     3481 ataaagcgag aaagtaaccg ccataccgat tgccgcccaa ggaacagatc caagatgcca
     3541 tgtgaggatt aaaacaccga tagtagcaga aataacagca ataatttcgc cacgactcaa
     3601 gcgctctttt aagataactg ttgcgagaag tacgtttaca agtggattga tgtaataacc
     3661 aagacttgct tcggtcacat gcccactatt caccgtataa atgaataaat accagtttgc
     3721 tgtcactaaa aaagctgccg caataatcgc aatcagcgtt tttggtttaa gcaatacgtc
     3781 cttagtttct tgaaaaacca tcgaagcttt tcgcaaacaa acgatcaaaa ataacataaa
     3841 aataaaagac catataattc tataggccaa aatctccatt ggtgggacat ttgtgactag
     3901 cttccagtaa atcggaagga caccccaaca tacataagcg agagcgccag cgatgattcc
     3961 gcctagctgt ccattttgtt tattttccat agcgatgtta gccccctttt tttaaacaat
     4021 agaactattt tagcttaaaa gggggaataa agctacaaaa aaaactacga ataggctagc
     4081 tattcgtagt ttctacaatt atttgcttgc ttcgatttgg atgtttaatt tcacttcgtc
     4141 gccaataagt acgccaccag tttctaacgc agcattgtaa ttaaggccaa agtctttgcg
     4201 gttgaattta ccttttgctt caaagccagc taccatgttg ccagtatttg gatcttttcc
     4261 tgttccttcg tagcttactt ctagtgtaag aggtttggtt acgtcgcgaa tagttaagtc
     4321 accagtcact tcgtattcat catcgccgtc agctgtaatt tttgttgccg aaaaagtcac
     4381 gtttggatat ttttctacat taaagaagtc ttcgcttttc aaatgtccat cacgttgcgc
     4441 ttgacgagtg tcaacagaag cggctgcaac gtagaagttt aattttgcag aagttaaatc
     4501 ttctggatcc atttcgatat ccgctgtgaa atcgctaaat gcacctttta cttttgatac
     4561 catcatgtgt tttacttgaa attcgattga actatgcgct gggtctacgt tccatttttc
     4621 tactgtcatt gtttcattcc tccaaatatg tttttttata aaagcattct cttttaatct
     4681 agcctaaatc ctaagaaatt aaacctgaga aaaaatactt ttacgcctta gaaaagcaat
     4741 tgcttaactg tttataagta aactatatca tacttacttt taataagcaa ctataaaaac
     4801 gtattataaa tatatttttt tcgtaaatat gattgagttt ttcggttaaa gtgcgtagaa
     4861 taggttacaa gaggaggttg gatgatggta ggaattaata cagatacaga aaatattagt
     4921 gaactattaa aaacttattg gtcaatccag cgaatttcag cgggatatgc cgatcaaaat
     4981 gcggcgagtt taggattaac gattcagcaa cttgccatga ttaatgtgat ttacagcaca
     5041 cctggtattt cagtggcgga tttaacgaaa cgattaatta ttactggaag ttcggctgca
     5101 gctaatgttg acgggttaat cagccttggc ttagtagtga aattaaacaa aacaattcca
     5161 aatgacagca tggatttaac actcaagctt tcgaaaaaag gagaagactt atcgaaacgc
     5221 tccactgcaa acgcttttat gtataaagcc atgatgaaag tattcgaaaa cctgaccgaa
     5281 aacgaaatag aagaattaat tcgcctaaat aaaaaagtcg aaaccttact gaaaaagagt
     5341 aaataaaaac atctcctgta tcattcaagt aaaaatgaat gaacaagaga tgttttttta
     5401 tttttgatca aatttgcagt cttccagtgg aataactttt gttttatttg taaatttaaa
     5461 agatagccag aaaacaagga aaatagggag gccgatataa gaaataccga ttttttgcca
     5521 ccaagcagga ttcgtaaatt ctggtttcaa aaatgccgcg taatcttgac cgacaataac
     5581 taaaatacat aaaattagtg ctaaaatagg tccgaatggg aaaaattttg ctttatattt
     5641 tagttcactt aagtcatgtc cttgtttgat aaatgctttt cggaaacggt aatgactgat
     5701 agcgatgccg acccaagcaa taaatccggt taaaccagag gcggaaagta accacgtata
     5761 aatcactgtg ccgttttctg ttagcgttgt aatgaatgtc attgcaccaa caatcgtcgt
     5821 aacaattaaa gctgccatcg gaataccacg acggtttact ttacccaaga atttaggtgc
     5881 ttttttatca cgagccattg cccaaagcat tcttgtggaa gcataaagac ctgaattacc
     5941 agcagataaa acagaagtca ggataaccgc attcatcacg gaagccgcaa atgcaagacc
     6001 agctttttca aatacgagtg taaatgggct aattgccaca tctgttgcct cggcactaag
     6061 taaattcggg ttagtataag gaataatcat cccaataatg aaaatcgcaa aaatataaaa
     6121 tagcaaaatc cgccagaata cttgtttaat cgcttttggc acgctggttt ctggagtagc
     6181 actttcacca gctgcaatac caaccatttc agtcccttgg aaagaaaatc cagcaattaa
     6241 gaaggtacct aagatggcaa aaaatccacc tttaaacgga gcatcgccag cagtaaagtt
     6301 agaaaagcca ataacttcgc cgccaagaat tccgacaata gtaagcacgc cgacgataag
     6361 gaaaataata accgtggcca ctttaataat tgaaaaccaa tactctgatt ctccgtatgc
     6421 ttttaccgaa agcgcgttta agccgaaaat caaaattaag aaaatcgcgc tccatagcca
     6481 agcgggggtg ttcggtagcc aaaattgaac gataattgca gcagtggaaa tatcaactgc
     6541 aagtgtaatg gcccagttaa accaataatt ccaaccaagc gcaaaaccga aagctgggtc
     6601 aacaaatcga ctagcatagg tactaaatga accagataca ggcatgtaag tagccatttc
     6661 gcctaaactt gtcattaaaa agtacaccat aatcccgatt gctatataag caactaaagc
     6721 gccaccaggt cctgctgtat gaatcgcatt accacttgct aaaaataatc ccgtcccgat
     6781 tgaaccacca atggcaatca tggacaaatg ccttgttttt aagtcacgac gaatctcgcc
     6841 atgtgtttct ttcttcacta ttaatctccc tttctattat cagaggaagt gcgcaaaaac
     6901 agccaatctg caagaaattg gctgttacgt attttaccaa catcattttg tcagatagca
     6961 cacctataag aaatttcgac aaattcttat agcagtccag cccctttagg aaactgtccc
     7021 aacaactatt tctaaacaaa gagaaaatag tcacttcggc gatcaacctg ttcattcttt
     7081 gtcgtcggcg tctttgtttc gcctcgaaaa aattactagt gcatctcgca acctctacct
     7141 caccatttgg atgagggttt atatttgatt atttacccat aataacggaa aacgggctat
     7201 tttgcaatat cttttagtaa aattgtaatg cttctttgat tgtgctgtat gtagttaagc
     7261 tggctaggtt ttcttcgtag cgaattaatg tcatggcgaa ttttggcgat attccggtga
     7321 tgatgagctc tacaccagtt aatttcataa atccgtggaa cttcacaaga ttcattaccg
     7381 catcttcatt aaattcagct aaaccagaaa gatccataat caaataatct tccttgccat
     7441 ggtccatgta ttcactcaca tattcagaca tatgctgaaa acggtcatgt gttagcgagc
     7501 ctatcagtgg taacacacaa atgttttctt taatcggaac aattggcgtg gaaagtttct
     7561 cgatttctgt taatgatttc tcgagttcca gctgatagtc gtgctctgtc gtcacatctt
     7621 tttgaatgcc aacaaaatag agatgattat gatcatcgta aatcggttca atcgtaagtt
     7681 cattcataaa agaagtacca tcttttcggt aattttttag taaaacattc gcagttgatt
     7741 tttcgttaat ggcatgacgg atttttgcaa cttctttttt gtcagtatca tctccttgta
     7801 aaaagtgaca attggagcca agtgcttctt ctttagcata gccggtaata ttttcaaaac
     7861 cagtgttaac aaaaataatt ggattatctt tttgctcagg atctgtaata attactccta
     7921 cgctagacaa atttaatgct tttaaaataa catcgaattg tggataagcg gtcatctgcg
     7981 tgtttctccc cctttgtaaa tacatttcta tcataccacg caaatgaatg aaaacccaat
     8041 gtataatttg tgaaattaat cgtatgtgag cagtgcggag gtaaagttgg aaatgtgggt
     8101 gtataataga gctagaggtg ataagttatg tatataacat ttacagatag cgctaaaaat
     8161 cggcttgctg cactacggtc gaatttagaa gggcggctac atttgtatta tgatacagaa
     8221 ggctgttctt gcgaaaatag cggtattttc acattgcgat tagtagaaga gaaaacagcg
     8281 gaagatgacg aaattgaatc aaacattggt ccagtgctaa ttaaacgatg gacagaaatg
     8341 tttttagaag aagcgctaac tatcgattac aacgacacag aaaaaaccat gattctaaaa
     8401 agcgatggtc agtattataa tcgtaatcta ctgcttgtca caaatacaga cgaagtaatt
     8461 agttgcccgg taacttcata ataatagaag aaaagcctag aataaatttt ttattctagg
     8521 cttttttatg aaaatttcat gagaaagtgg tgaaacttta gacatatagt tacactgacc
     8581 tcggttttgt agtaacatgg aataggaagt ttatacatat ggaaggagtg tcctcatgga
     8641 acaaccatca gtagatgagc taaaaaattg gcgaaatgtt atgcttcttc accgttttgc
     8701 gttagaagaa gtcaacacga aacttaagat attgaatgaa gaatttcaat ttattcatga
     8761 ttataatcca atggaacatt tgaagtcacg tgtgaagtca ctagaaagta tcggagcaaa
     8821 attagaaaag aaaaaggtgg atatcacgcc agaaaatgca ctaaaatatg tacacgatat
     8881 tgcgggcatt cggattactt gttcttttgt ttcagatatt tttagaattc acgaaatgct
     8941 tgcagggcaa agtgatatca ctatcaaacg agtaaaggac tatgtaacga atccaaaacc
     9001 taatggctat cggagtttac atttactttg cgaagtacct gtattcctga caaatcgttc
     9061 cgagaaaatg accgtggaaa tccaaattcg gacagttgcc atggattttt gggcgagttt
     9121 ggagcataaa atttattata aatatcaaca agaagcacca attgagttag taaaagaatt
     9181 acaagacgcc gcacgaatta tcacccattt agatgaaaaa atgaaa
//
LOCUS       DASDYK010000102         9018 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.102, whole genome shotgun sequence.
ACCESSION   DASDYK010000102 DASDYK010000000
VERSION     DASDYK010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9018
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.102"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..580)
                     /locus_tag="U0308_002329"
     CDS             complement(<1..580)
                     /locus_tag="U0308_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEM2317289.1"
                     /translation="MVKELEIEFRNLLTKEEYDTLIESFRVKEEDFFEQTNYYLDTAN
                     FGLKERHSALRIRQLETQYQLTLKTPEARGLMETTQILGEDQASAIISGANIPVGPVR
                     DTLKELGINHEDLQVFGSLKTIRAEKDYKKGLLVFDKNFYGSISDFDLEYEVSDYDKG
                     KEVFDKLLKEYQITNQPAENKVARFYHHVYENN"
     gene            complement(597..1064)
                     /locus_tag="U0308_002330"
     CDS             complement(597..1064)
                     /locus_tag="U0308_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEM2317290.1"
                     /translation="MILTLLQNGDYETARTQALAELKNNSDNAELHYYAAWAHDALGK
                     EDAAIPFYEKAIQLGLPVDSRKEAYIGLGSTYRITGQPEKASLLFQTALQEFPDNNAL
                     RTFSVMAKYNQGLEKEALQEALILLTQTTSDADILSYKKAIQFYAQDLDATFH"
     gene            1223..1891
                     /locus_tag="U0308_002331"
     CDS             1223..1891
                     /locus_tag="U0308_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HEM2317291.1"
                     /translation="MNHWEDFLAPYKQAVEELKIKLKGMRSQFELENNHSPIEFVTGR
                     VKPVASILDKANQKHIALDHLVEEMQDIAGLRMMCQFVDDIEVVVRLLRQRNDFRIVE
                     ERDYITNKKPSGYRSYHVVIEYPVETIQGEKKILAEIQIRTLAMNFWATIEHSVNYKY
                     QGEFPEAINKRLKRAAEAAFQLDEEMSQIREEIQEAQVYFSQNKDVSKDKKAVHQVMP
                     KKNK"
     gene            1923..2717
                     /locus_tag="U0308_002332"
     CDS             1923..2717
                     /locus_tag="U0308_002332"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HEM2317292.1"
                     /translation="MKYMITSKGDEKSDLLRLNMIAGFGEYDMEYDDVEPEIVISIGG
                     DGTFLSAFHQYEERLDEIAFIGIHTGHLGFYADWRPAEANKLVKLVAKGEYQKVSYPL
                     LKTTVKYGIGKKEATYLALNESTVKSSGGPFVVDVVINDIHFERFRGDGLCMSTPSGT
                     TAYNKSLGGALMHPSIEAMQLTEMASINNRVYRTIGSPLVFPKHHVVSLQPVNDKDFQ
                     ISVDHLSILHRDVQEIRYEVSAKKIHFARFKSFPFWRRVHDSFIED"
     gene            2736..3626
                     /locus_tag="U0308_002333"
     CDS             2736..3626
                     /locus_tag="U0308_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEM2317293.1"
                     /translation="MFLEWKVETEEDGLLLRTFLKSKHISKQLLTAVKFGAEGKIEVN
                     NKEQNVLYHVKVGDKVRLTFPTEQQNERLLAEYTDLDIIFEDDFLLIINKPAGMASIP
                     SQYHPNGSVANFVKGHYETQGLTNAIHIVTRLDRETSGLMLIAKNRFAHARLSTFLQK
                     GLLKRRYQAFTSGVLVEQKGSIEAPIGRKEVSIMERFVTPEGKYAKTNYEVLARYRAF
                     DHVAIQLETGRTHQIRVHFSYIGHPLIGDDMYGGDTNLLKRQALHSCHLHLVHPLTEK
                     YMAFDLPLPADMEEIIQKSK"
     gene            3704..4492
                     /gene="fabI"
                     /locus_tag="U0308_002334"
     CDS             3704..4492
                     /gene="fabI"
                     /locus_tag="U0308_002334"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEM2317294.1"
                     /translation="MNLSLEGKTYVVMGVANKRSIAWAIARSLNEAGAKLVFTYADDR
                     AKKSITELVPSLSEVNQNPLILACDVTSEEAITETFETIKDKTGKLSGLAHCIAFANK
                     DFLTGDYLEVDRKSFLQAHEISAYSFTAVARALKHLEMLTEDASLLTLTYLGGERVVE
                     NYNIMGVAKASLDASVRYLAMDLGAIGVRVNAISAGPIRTVSARGVSGFSDSISLVEE
                     RAPLKRATQAEEVGDTAYYLFSNLSRGVTGEVIHVDSGYHIIGF"
     gene            complement(4520..5794)
                     /gene="dltD"
                     /locus_tag="U0308_002335"
     CDS             complement(4520..5794)
                     /gene="dltD"
                     /locus_tag="U0308_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltD"
                     /protein_id="HEM2317295.1"
                     /translation="MKKKLWMTFGPLLVAFAVFLFVLFGPSSLFSKVSSETVEKSATS
                     MNESVIQGLDIQKKALQEGNYLPIYGSSELSRVDPFHPSVVSKKYNQGYTPFLLGRPG
                     TQSLSHFLDVNALGDDLKGKKVAVVLSPQWFQPKGVSDPSFGANFSPLHAYKFALEDT
                     KNTPERRYAAKRLLSFQVVQSDSTLKKLLENIVAKGPKKPHDPKLLNITGNIELKILE
                     RKDDLESKYIIGSKQDRVNKGLKELPETLDYQKLDELAKETGERSTGNNPFQVKEHYY
                     QKKIKPIEGKLKNSRKDLRYDQSPEFADLQLLMDAFKKAGADVIFINPPINGKWIDYI
                     GMDKQGLDDYYAKTKEQIESQGFRYYSLEEYQNDAFFLEDPIHLSWRGWVKIDQVLAD
                     FVKEPMQTNYKPTPKEYYFKEHPENGPKKDRK"
     gene            complement(5794..6030)
                     /gene="dltC"
                     /locus_tag="U0308_002336"
     CDS             complement(5794..6030)
                     /gene="dltC"
                     /locus_tag="U0308_002336"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltC"
                     /protein_id="HEM2317296.1"
                     /translation="MAFRENVLEILEEITETDEVVQNTNIKLFDEGLLDSMATVQLLI
                     EIEEKLDITVPVSEFDRDEWATPEMIITQLEALK"
     gene            complement(6056..7240)
                     /gene="dltB"
                     /locus_tag="U0308_002337"
     CDS             complement(6056..7240)
                     /gene="dltB"
                     /locus_tag="U0308_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltB"
                     /protein_id="HEM2317297.1"
                     /translation="MSLPYGTILYFGVLVLFLIPIIVAGLLGKRLPIYNAFVTLVFLY
                     FMFSASPVQGATFIFFVFWQLALVRLYFHYRQEKKQNHGGVFVIAVILSILPLIISKV
                     VPILGDNVTMVGFLGISYLTFKAAQMIIEIRDNLIKQYNAWDFVNFLLFFPTISSGPI
                     DRFRRFKKDVDNPPSKEAYLALLNRGIFLIFLGFLYKFIIAYLVNKHFVVPLDIAITH
                     HVDTTKSLIGYMYAYSMYLFFDFAGYSAFAVGVSYLLGVQTPMNFNKPFAARNIKEFW
                     NRWHMTLSFWFRDYVFMRFVFWVTKKKWFKSKFTIAYLAYFVNFFIMGVWHGLHWYYI
                     VYGLYQATLIVGFDLFERFNKKHKFYPKNKITYVIGVFITFQFVCFGFLIFSGILDKI
                     NF"
     gene            complement(7237..8769)
                     /gene="dltA"
                     /locus_tag="U0308_002338"
     CDS             complement(7237..8769)
                     /gene="dltA"
                     /locus_tag="U0308_002338"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltA"
                     /protein_id="HEM2317298.1"
                     /translation="MTTSIIERIDAWAEKTPDFPCYEYAGTRLSYKELKRQSDAFGSF
                     LLKNLNTDKEKPIIVYGHMSPLMLVAFLGSIKSGRAYVPVDVSMPVERIEQIKKAADP
                     SLFICTEELPSNLTITGCPVLTQDQLMDALEKHFGEVPDKEACVKNDDNYYIIYTSGS
                     TGNPKGVQISQNNLVSFSNWILQDFSLSQGLRFLNQAPFSFDLSVMDLYPSLLSGGTL
                     VPLDKTITANMKDLYREIPAQNLDVWVSTPSFADLCLLDDNFNQENNPGLIRFLFCGE
                     VLAKKTASELLNRFPDAVIYNTYGPTEATVAVTQVKVTREVIDAYPSLPLGVIKPDMR
                     LHIVDQETGEVLPEGEKGEIVLIGASVSKGYLNEPEKTDQVFFDYKGYQAYRTGDSGI
                     IKDGYLFFQGRLDFQIKLHGYRIELEDIENNLKKVSYIQNCAIIPKMKDEKVDMLVAQ
                     VIPTNHDFEKEYQLSAAIKNELKEFMPAYMIPRKWIYKTEFPLTMNGKIDRKALNSEV
                     NK"
     gene            complement(8806..8952)
                     /locus_tag="U0308_002339"
     CDS             complement(8806..8952)
                     /locus_tag="U0308_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid D-Ala incorporation-associated
                     protein DltX"
                     /protein_id="HEM2317299.1"
                     /translation="MNKIKLILQHPATIFTMKTFFYLVVLLGLLWFYGFKNPEGAKFI
                     YNEF"
BASE COUNT         2832 a         1520 c         1776 g         2890 t
ORIGIN      
        1 tattattttc atatacgtga tgataaaatc gtgctacttt attttcggca ggttgattgg
       61 tgatttgata ttctttaagt agtttgtcaa aaacctcttt tcctttatca taatcagaca
      121 cttcatactc taagtcgaaa tctgatatag aaccataaaa attcttatca aacacaagta
      181 agcctttttt ataatctttt tctgcgcgaa ttgttttgag tgaaccgaaa acctgtaagt
      241 cttcatgatt gattcctagt tcttttaacg tgtcacgaac tggtccaact ggaatatttg
      301 ctccagagat gatggcactt gcttggtcct cgccaagaat ttgagtagtt tccatcagtc
      361 cacgtgcttc tggggttttg agtgttaatt ggtactgtgt ttctaattgt cgaattcgaa
      421 gagcggaatg acgttctttt aacccgaaat ttgctgtgtc taaataataa tttgtttgct
      481 caaagaaatc ttcttctttc actcgaaaac tttctattaa tgtatcgtat tcttctttgg
      541 ttagtaggtt acgaaattcg atttctagtt ctttgaccat gatagttcag ctccctttaa
      601 tgaaatgtcg catctaaatc ttgcgcataa aattgaattg ctttcttgta acttaaaatg
      661 tctgcatcac tcgttgtttg tgtcaagagt attaaggctt cctgcaaagc ttctttttct
      721 aagccttgat tgtatttagc cataactgaa aaagtgcgca aggcattatt atctggaaat
      781 tcttgtaaag cggtttggaa aagcaggcta gctttttcgg gctgccctgt aatccggtaa
      841 gtactaccaa ggcctatata tgcttcttta cgagaatcaa ctggaagacc gagctgtatg
      901 gctttctcat aaaaggggat tgcagcatct tctttaccga gtgcgtcatg ggcccatgct
      961 gcataataat gaagttctgc gttatcggag ttgtttttta attcagcaag tgcttgagtg
     1021 cgcgcagttt cgtaatcgcc gttttgaagt aatgttagaa tcattttcat cctcctttta
     1081 gttgtcgttt gaatgcttcg gttttatttt accacgggat tgaaaaaaag gttactttaa
     1141 gcaaggtgga ttaactgctt ttgtgttaaa ataaaactga tgttgcataa atttaatcat
     1201 gaatatactt gaggtgagcg atttgaatca ttgggaagac tttttagcgc catacaaaca
     1261 ggctgtggaa gaacttaaaa ttaaacttaa aggaatgcgt tcacaatttg agcttgaaaa
     1321 taatcattcg ccaattgaat ttgttacagg ccgagtgaag ccggttgcga gcatattaga
     1381 taaggccaat caaaagcata ttgcactaga tcacttagta gaagaaatgc aggatattgc
     1441 gggactccgt atgatgtgcc aatttgtaga tgatattgaa gtagtagtgc gccttttaag
     1501 acagcggaat gattttcgaa ttgtagaaga acgcgattat attacaaaca agaaacccag
     1561 tggttaccgc tcctatcacg ttgttattga gtacccagtg gaaacaattc aaggagaaaa
     1621 gaaaatctta gctgaaatcc aaattaggac acttgcaatg aatttttggg caacgattga
     1681 gcattcggta aactacaagt atcaaggcga atttccagaa gcaatcaata aacgtttaaa
     1741 gcgcgctgct gaggctgctt ttcaactaga tgaggaaatg tcgcaaattc gcgaagaaat
     1801 acaagaagcg caagtttatt tttctcaaaa taaagacgta tcaaaggata aaaaagcagt
     1861 gcatcaagta atgccaaaga aaaataagta attagttgta ggaatagggg cgaatagaaa
     1921 taatgaaata tatgattact tccaaagggg acgaaaaatc cgatttgctg cgactaaata
     1981 tgatcgcagg ttttggggaa tatgacatgg aatatgatga cgtagagcct gaaattgtta
     2041 tttctattgg tggagatgga acgtttctgt ctgcttttca tcaatacgag gaacgcttgg
     2101 atgaaattgc ctttataggg attcatactg gtcatctagg cttttatgcg gattggagac
     2161 cagctgaggc aaataaatta gttaagcttg tagcaaaagg agaatatcag aaagtttcct
     2221 atcctcttct caaaacaacc gtgaaatatg ggattggcaa aaaagaagca acatatttag
     2281 cgcttaatga atcaactgta aaaagttcag gaggcccttt tgtagtagat gttgtgatta
     2341 acgatattca ttttgaacga tttcgtggag atggcctttg tatgtcaaca cctagtggaa
     2401 caacggctta caataaatcg ctaggtgggg cacttatgca tccttctatt gaagcaatgc
     2461 agttaacaga gatggcatcg attaataatc gagtgtaccg gacaatcggt agcccactag
     2521 tttttccgaa acatcatgtt gttagtttac aaccggttaa tgacaaggac tttcaaattt
     2581 ctgtagatca tttgagcatt ttgcaccggg atgtacaaga aattcggtat gaagtatctg
     2641 caaaaaaaat tcactttgcc agatttaaat catttccatt ttggcgtcgt gtacacgatt
     2701 cgtttattga agattaagct agcaggaggg agcatgtgtt tttagaatgg aaagtcgaaa
     2761 cggaagaaga tggactctta cttcgcacgt ttttgaagag taaacatatt tcgaaacaat
     2821 tattaactgc cgtgaaattt ggggcagagg ggaaaattga agtaaataac aaagaacaaa
     2881 atgttttgta tcacgtaaaa gtaggcgata aagtgaggct tacttttcca acagagcaac
     2941 aaaatgaacg attgcttgcg gaatataccg atttagatat tatttttgaa gatgattttt
     3001 tattaattat caataaacca gctggtatgg cttctattcc atcacaatat catccaaatg
     3061 gatccgttgc aaattttgtc aaagggcatt atgaaacgca aggactgacg aatgctattc
     3121 atattgtaac aagactcgat cgtgagacgt ctgggttaat gttaatcgcc aaaaatagat
     3181 ttgctcatgc tagattaagt acgtttttgc aaaaaggatt actaaaacgg cgctatcaag
     3241 catttacatc aggagtttta gtagaacaaa agggttcgat tgaagcgcca ataggacgca
     3301 aagaagtgag tataatggaa cgttttgtta ctcctgaagg taaatatgcc aaaacaaatt
     3361 atgaggttct cgcgcgctat agagcatttg accatgtggc tattcaactt gagacaggaa
     3421 gaacacacca gattcgtgtg catttctctt atattggaca tccgcttatt ggcgatgata
     3481 tgtacggagg agatacgaat ttgttgaaaa gacaagcgct gcactcatgt catctgcatt
     3541 tagtccaccc tttgacagaa aaatatatgg cgtttgatct acctttacca gcagatatgg
     3601 aagagataat tcaaaaatcg aagtaataag agttttaaaa agttatttgg tcatgtaaaa
     3661 tggaagaagc gaacaaatcg catcaatttt aggaggaaag aacatgaatt tatcattaga
     3721 gggaaaaaca tatgttgtaa tgggagtagc taataagcgt agtattgctt gggcaattgc
     3781 gcgttcacta aatgaagctg gagcgaaact tgtatttaca tatgcggacg atcgtgcgaa
     3841 aaaaagcatt acagaactag taccttcatt aagcgaagta aatcaaaatc cacttatctt
     3901 agcttgtgat gtaacaagtg aagaagctat tacagaaaca tttgaaacaa ttaaagataa
     3961 aactggcaaa cttagtggct tagcacattg tattgctttc gctaacaaag actttttaac
     4021 tggagattat ttagaagtag atcgtaaaag cttcttacag gcacatgaaa ttagtgctta
     4081 ctcattcaca gctgttgctc gtgcactaaa acacttagaa atgttgacag aagatgcaag
     4141 tttactaaca ttaacttacc ttggtgggga acgtgtagta gaaaactata atattatggg
     4201 tgtagcaaaa gcttctctgg atgcaagtgt tcgatacctt gctatggact taggggcaat
     4261 tggtgttcgt gtaaatgcta tttctgcagg accaatcaga acggtatctg ctcgtggcgt
     4321 tagcggtttc tctgattcta tttcactagt ggaagaaaga gccccactaa aacgtgcgac
     4381 acaagcggaa gaagttggcg atacagcata ttacttattc agtaatttat ctcgaggcgt
     4441 tactggcgaa gtaattcatg tagatagcgg ttatcatatt attggatttt aaagaaaaaa
     4501 gaccgtaagt agttaaaaac tacttacggt ctttttttgg tccattttct ggatgttctt
     4561 taaagtaata ttcttttggt gttggtttat agtttgtttg cattggttct ttaacgaagt
     4621 ctgctaatac ttggtcgatt tttacccaac cgcgccagct taaatgaatc ggatcttcta
     4681 agaaaaaagc atcattttga tattcttcta gagagtagta acggaaacct tgactctcaa
     4741 tttgttcttt tgttttagca taatagtcat ctaaaccttg tttgtccata ccaatgtaat
     4801 caatccattt tccattgata ggcgggttaa tgaaaatgac atctgcacca gcctttttga
     4861 aagcatccat tagtagctgt aaatcagcaa actcaggaga ttggtcataa cgtaaatctt
     4921 tgcggctatt ttttaattta ccttcaattg gtttgatttt cttttggtaa taatgttctt
     4981 tgacttgaaa agggttatta ccagtacttc tctccccagt ttctttagcc aattcatcta
     5041 gtttttggta atctaaagtt tctggaagtt cttttaggcc tttgtttacg cgatcttgtt
     5101 tggaaccaat gatgtatttt gattctaaat catctttacg ttccaaaatc ttcagttcga
     5161 tattaccagt aatgtttaga agttttggat catgaggttt tttaggccct tttgcgacaa
     5221 tgttttcgag taattttttt aatgtagagt cactttgaac tacttggaaa gataataaac
     5281 gtttagctgc atagcgacgt tcaggcgtat ttttcgtatc ttctaatgcg aatttatatg
     5341 catgaagagg ggaaaaattg gcaccaaatg atgggtcaga aacgccttta ggttggaacc
     5401 attgtggaga taaaactacc gctacttttt ttccttttaa atcatcacca agtgcattta
     5461 cgtctaagaa atgacttaat gattgtgtac ctgggcgacc aagtaaaaat ggtgtatagc
     5521 cctgattgta tttttttgag actacgctag gatgaaatgg gtcgacgcgg gaaagctctg
     5581 aagaaccata aattggtaaa tagtttcctt cttgtaaagc ttttttctgg atgtctaagc
     5641 cttggatgac ggattcgttc attgatgtag cgcttttctc tacggtttca gaagaaactt
     5701 tagagaataa gctactaggt ccgaatagaa cgaaaaggaa aaccgcgaat gcgaccagta
     5761 aaggcccaaa tgtcatccac agcttttttt tcattatttt agcgcctcga gttgtgtaat
     5821 aatcatttca ggagtagccc attcgtcgcg gtcaaattcg gaaacaggta cagtgatatc
     5881 taatttttct tcaatttcaa ttaaaagttg aaccgtagcc atagaatcaa gcaagccttc
     5941 atcaaataat ttaatatttg tattttgtac tacttcatcc gtttctgtaa tttcctctaa
     6001 gatttctaat acattttcac gaaaagccat tataaattac cacctttagt tagttttaaa
     6061 aattaatttt atctaaaata cctgagaata tcaggaatcc gaaacaaaca aattggaatg
     6121 taatgaaaac gccgattaca taagtaattt tgttttttgg atagaatttg tgcttcttgt
     6181 taaagcgttc gaataggtca aatccaacaa ttagtgttgc ttgataaagg ccataaacga
     6241 tgtaatacca atgaagtcca tgccatacac ccatgatgaa aaagttaacg aaatatgcta
     6301 ggtaggcaat agtgaactta cttttaaacc atttcttttt tgtaacccaa aatacgaaac
     6361 gcatgaatac ataatcgcgg aaccagaaag aaagcgtcat atgccaacga ttccagaact
     6421 ctttaatatt gcgagctgcg aaaggtttgt taaagttcat aggtgtttga acgccgagta
     6481 agtaactaac cccaactgca aaggcactgt aacctgcaaa gtcaaagaat aaatacatac
     6541 tataggcata catataacca attaaactct ttgttgtgtc tacatggtgt gtaatcgcga
     6601 tgtctagtgg aacaacaaaa tgtttgttta ctaagtaagc gataatgaat ttgtagagaa
     6661 aaccaaggaa gataaggaat attcctcgat ttaataaagc tagataagct tctttactag
     6721 gcggattatc cacgtctttt ttaaagcgac ggaatcggtc aatcggtccg gatgatatag
     6781 tcgggaagaa tagtaagaaa ttaacaaaat cccacgcgtt atactgttta attaagttat
     6841 cgcgtatttc aataatcatt tgtgccgctt taaatgttaa gtaggaaatc cctaggaaac
     6901 caaccattgt aacattgtct cctaaaattg gaacaacttt agagataata agggggagaa
     6961 tagacagaat cactgctatg acgaatacgc cgccgtggtt ctgctttttc tcctgcctgt
     7021 aatggaagta aagtcgtaca agagcaagtt gccagaagac aaagaagata aaagtagctc
     7081 cttggactgg acttgctgag aacataaagt ataaaaatac gagtgtcaca aaagcattat
     7141 aaatcggtaa tctttttcct aacaaaccag ctactatgat aggaatcaaa aatagtacaa
     7201 gtactccaaa ataaaggatt gtgccgtatg gtaaactcac ttgttaacct cgctattaag
     7261 cgccttgcga tcgattttgc cattcatagt taacgggaat tccgttttgt aaatccattt
     7321 tcttgggatc atgtatgctg gcataaattc tttcagttca ttttttattg ctgcacttag
     7381 ctggtattct ttttcgaaat catggttagt agggatgacc tgtgcgacca acatatctac
     7441 cttttcatct ttcattttag gaataatagc gcagttttga atgtaactta ctttttttag
     7501 gttgttttcg atatcttcta attcgatgcg ataaccatgc agtttaattt ggaagtcaag
     7561 acgtccttgg aagaacagat aaccgtcttt gataatgcca gagtctcctg tgcgataagc
     7621 ttgataacct ttatagtcga agaatacttg gtctgttttt tcaggttcat ttaagtaacc
     7681 tttagaaacg ctagcaccaa tcaggacaat ttctcctttt tcgccttctg gaagaacctc
     7741 accagtttct tggtcaacga tgtgtaaacg catatctggt ttaataacgc caagtggtaa
     7801 gcttggataa gcatcgataa cctctcgagt tacttttact tgagtgacag ccacggttgc
     7861 ttctgtaggt ccgtatgtgt tgtaaataac tgcatctggg aaacgattca gcaattcgct
     7921 tgctgttttc ttggcaagta cttcaccaca gaataagaaa cgaattaagc cagggttatt
     7981 ttcttggtta aagttatcgt ctagtaagca caaatcagca aaagaaggag tagaaaccca
     8041 tacatccaag ttttgagcag gtatttcacg atataaatct ttcatattcg cagtaattgt
     8101 tttatcaaga ggtacaagcg ttccacccga tagtaaactt ggatataaat ccataacgga
     8161 tagatcgaag gaaaagggtg cttggtttaa gaaacgcaat ccttggctta aagaaaagtc
     8221 ttgtaatatc cagttactaa aacttactag attgttttga ctgatttgaa cccctttagg
     8281 atttcctgta cttccggatg tgtaaataat atagtagtta tcatcatttt ttacacatgc
     8341 ttctttatct ggaacttctc cgaaatgttt ctctaaggcg tccattagct gatcttgtgt
     8401 tagtaccgga caaccagtaa tagtaaggtt actaggtagc tcttctgtac aaataaacaa
     8461 agaaggatca gctgcttttt taatttgttc tatacgttca actggcatag aaacatctac
     8521 tggtacataa gctcgacctg atttgataga gcctaaaaat gcaactagca ttaggggaga
     8581 catatgtccg taaacgataa taggtttttc tttgtcagta tttaggtttt ttagtagaaa
     8641 agagccgaat gcatcagatt gtcgttttag ttctttatag gaaagacgtg ttccagcata
     8701 ttcatagcaa gggaaatccg gtgtcttctc tgcccatgca tcaattcttt ctatgatact
     8761 cgttgtcatt attgatattc ccatttttaa cagtcctttc ttcttttaga attcattgta
     8821 aatgaatttc gcaccttcag ggtttttgaa accataaaac caaagcaatc ctagcaaaac
     8881 aacaaggtag aaaaaagttt tcattgtaaa aatagttgct ggatgttgca aaatgagttt
     8941 tattttattc ataaatccac ctctttatta tttcatttgt gttacaaata ttaaaaataa
     9001 acgtttaata cttactta
//
LOCUS       DASDYK010000103         8991 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.103, whole genome shotgun sequence.
ACCESSION   DASDYK010000103 DASDYK010000000
VERSION     DASDYK010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8991
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.103"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(188..1591)
                     /locus_tag="U0308_002340"
     CDS             complement(188..1591)
                     /locus_tag="U0308_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HEM2317300.1"
                     /translation="MNLEKELKEYLGFDEFRPGQKEVIETALAKRNCFAMLPTGTGKT
                     ICYQLAGHLMDGLVLIVSPLLSLMQDQMERMRAHGEKRVAALNSFLKREEKGQVLANI
                     HLYKFIFLSPEMLNNETVKNLLLKQRISLFVIDEAHCISQWGHDFRPDYLMLGKFIQE
                     AEFPVTMVLTATATKKVRADILTQLHLTDCAQIVYSVNRPNISLQVEKFSNQHVKKDR
                     LYALVRKLQTPGIIYFSSKKLAESTALELSEIADLRVAYYHGDMDTEDRIIIQQQFVY
                     GQLDVICATSAFGMGIDKADIRYVIHYHMPADLEAYLQEIGRAGRDGENSVAILLYAN
                     GDEFIQMQLADQDIPDANLMNLTNEQRKTLPETEQRFIEYYQRSGLSTKELTDKMDYR
                     KKWKRANLQQFIGYLHTTDCRRNYILRYFEETPLEVTPENCCDLDGAEIIDFEKRPIT
                     QQKEIPTWEAYLAYLLQ"
     gene            complement(1588..2595)
                     /locus_tag="U0308_002341"
     CDS             complement(1588..2595)
                     /locus_tag="U0308_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2317301.1"
                     /translation="MDKLDNYIMTILEKSITPRKLPFLHTVLAGRRTGQAVQDIHLFQ
                     MQHLFGLVPNLKASYLEKRISELVHQGSILSTENGYVTQGQLVAMFENDYPNFQGFTF
                     QGQAFAFFAHLRLAVQVVSNIHHHESYYLPVIRDKKVQQFIKHWVKHRDKSNLANQLY
                     GELVAWMNKLAVARPAFLVERFSGGELMGYTTEQIASKYQVEKWDVYFEVLHEVHRLL
                     IAMKKTPEEWPILASLVPDELNGLTSSAMQTYVLWQNGADLEAIERIRNLKKSTIHDH
                     FVEIRATLKEANVPYLPEETIIQTIITKKWNLLREIKAEFPDLDYYQIRLAVVSREGK
                     Q"
     gene            2749..2973
                     /locus_tag="U0308_002342"
     CDS             2749..2973
                     /locus_tag="U0308_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HEM2317302.1"
                     /translation="MKYCLVEKDTCIACGACSIHAPDVFDYDTEGLAFNILDNNTGTK
                     VIPEDLVETVIDAEFACPSLSIKVSDSSFH"
     gene            complement(3037..>8991)
                     /locus_tag="U0308_002343"
     CDS             complement(3037..>8991)
                     /locus_tag="U0308_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterial Ig-like domain-containing protein"
                     /protein_id="HEM2317303.1"
                     /translation="VVSQLNLTVFQAFAEEKGEEPLSYEVQEELSKDKKKAKLKIKAT
                     SNNNQVEILSIETPDGNKIEGKEAEYTAEKNGDVNFIISYKENIEGKETEIKTFKASY
                     EVKNLIIEKEEANQSKDSVKQNETKAPLKNNQLKSGNDATVTLNIPAYDGTAWANGDI
                     KDVNVTVDFSNSTSTSKEVEFTLPDGMRFVSIPVPSSFQVSTGVDSGVINRLSAGDPI
                     GTAITSVTIPNKETTYDKATFGTVNYKLTPGTEKVSFNFSVRVDANKYYGATDLKAPI
                     KVEAFVGDNKMAIASEEKAIRAEGNKVVGYANQTHVSTMFRNWYKSFRTPDVLASTDD
                     EDSYAYTKSYSVVNGMNQVDERGTNIFSPKNVSTTLYYPEGMEYVGVVNEKYALLNEN
                     ANTTITHYPEENKVVFDFKQQNFKGVTDTVYAIKYKIPKGTPAGTYTAPKVPHAVITT
                     YDDKVFESDALTNNSTDLTTKATLDACRVVDSTENKMALIVGNKNINPDNETWAGNVR
                     INNKDTAGTKTNQVFQIEFDSNWEASIVNIPFDGNRKDNDITNIQYKTNFDDTYQTYN
                     GNLPKNSMKNIAILEADAVGLQPGEYFTEVKANVGDFSTGYTSYSESGGFGEESTNSY
                     GIVKPGISSVQFKVSIWDEADEVNTKVSGTSVYSVADNITTAANGTANFYNEQGQVIK
                     TAGAGDKFTTKATLVLFNYPYGTRTVLNDPEVYLRQLDGTKILPSSIKLTDQDGEEIE
                     FSIKIETAKNGEKVYVLKTKDATVGRYVGYPSKHKFLNLSYDTTIDVTLDKSLHTDIQ
                     QLLAWGGPNVKAATAANTFMDTGLDVNQNGIENERLLSANSSTLSVPKQDAVTVETFL
                     NLAGEGAKASYVEGDDSTVSYFTPGTEADYTVRVTNTSTGIASAFELYIPIPKTGQNF
                     GSKFQTETFKWDMKLNDAVQLTDEQKAQFDISYATEANKNNYESESVYSAVPSDYGKV
                     NMVRIKVKTKIDPGETQTIKVPLKVDETFNSATEGNKISERDVYNPYYRVTTNAYSGT
                     LPGTKVGAELIILEASGFLFQDKDANGLYEKAQGDTALANETVELYKWNENTSNYEPF
                     LKNGEPVSVKTNADGKYTFNYNLNLSYGKYAVKFPERAGNQFTLKQVGQDNTINSTVS
                     NKGTDKGWVKEIDPAQPVSQNINAGYMEYAPDNDLKVNLSAKIVQAGKSLKVTLPKVR
                     ATSGEAVEDTIEPSFFHNIQAITDGYKWTSNDTTLATTQTANDGSGIIVGISAGNKAI
                     ATTDIGITIKDIFDTEKKSTAPVYITEPSATIDQKEGLILGAMNFSLEYKDSNKLTET
                     EAITLAKTASFEEVKTGVLSTAQDCTSSVKVDAKQLKAIQEGSNQGGTYPLTYQVAKN
                     GKTAEVVIQVKVEKDLTTVNVHDSILYLGDTWTATDNFDSALNKVGETVPFGDIQVEG
                     SVDTNTAGIYSVTYTYKGVSKKAKIEVKENLTEINAHDSTIYTGDTWRAGDNFDSGLD
                     KDGNALSLKDLTVIGTVNTNLAGVYTITYKYEDTVSSITVTVKENKKGINGHDSSIYV
                     GEAWTAADNFDNAVDKDGKPVSFADIKVKEEPKVDVNKAGRYQITYNYDGASTTVTLT
                     VKEIKTAINAHDSILYIDDNWSAKDNFDSARDKDGNIVSFNDVQVLGTVDTSQAGTYP
                     ITYVYAGITKTIQVIVKHPKTAVRAHDSVIYVGDNWKAQDNWDNTLDKAGQKVKWKDI
                     TVKENPAVDVTKPGVYEVTYSYDGISATINVTVKPRKTTVKIHDSSFYAGNSWNAKDN
                     FDYATNKAGEKVAFKDITVAGKVDSKTPGTYEISYVYDGVKAVAKVTVLKNHSILMVK
                     DRVIKVGEKWNAKDSFIQATRRDGKNIPFSQVKVQGKVNLNKAGKYQVIYSVDPNEGT
                     EDAGKQMLSVTATIQVENRGDAGLQDNEPRSVKDNNQRAANSNDIKLIPKTGDQTNQW
                     VLWAGLCLTGLAMLLWGFALRRRKVK"
BASE COUNT         2531 a         1790 c         1401 g         3269 t
ORIGIN      
        1 acttaaacca cttttttaga aaaaaaagca agaattatta taatttagta cttctggcat
       61 agaatttatg ttgattttat atagattact gaacaaaata ataacaattt ttttactttt
      121 aaacaagtct ttttttcaca aaaaatatga aactatatag tttttgtcaa atttcgtaac
      181 agcaaaacta ttgcaataaa taagctaaat aagcttccca tgttggaatt tctttttgct
      241 gtgttattgg tcttttttca aaatcgatta tttctgctcc atccaaatca caacagtttt
      301 ctggggtgac ttctaacggc gtttcttcaa agtatcgtag aatataatta cggcgacaat
      361 ccgttgtatg cagataccca ataaattgtt gtaaattagc ccgcttccat ttttttcgat
      421 aatccatttt gtcggttaat tctttcgtac ttaaaccact tctttggtag tattcaataa
      481 aacgttgctc tgtttcaggt aacgttttgc gttgttcatt cgtcagattc attaagttgg
      541 catctgggat atcttgatcg gctaattgca tttgaatgaa ttcatctcca ttcgcgtata
      601 agagaatcgc cacactgttt tcgccatcac gacctgctcg accaatttct tgcaaatatg
      661 cttccaaatc tgcaggcata tgataatgaa taacatagcg aatgtcagct ttatctatcc
      721 ccattccaaa tgcgctagtg gcgcaaataa catccagctg cccgtaaaca aattgttgct
      781 gaataataat tctatcttct gtatccatat ccccgtgata ataagctact cttaaatcag
      841 caatttcgct taattcaagc gcagtgcttt ccgctaattt tttactagaa aaataaataa
      901 ttccgggtgt ttgtagtttg cgaacaagcg catataaacg gtcttttttt acatgctggt
      961 tagaaaattt ctccacttgt aaagaaatat tcggtcgatt aacagaataa acaatttgcg
     1021 cacaatccgt tagatgtaat tgcgttaaaa tatctgctct aactttcttg gttgccgtag
     1081 ctgtcagcac catagtcaca ggaaattcgg cttcttgaat gaacttacct aacatcaaat
     1141 aatcagggcg aaaatcatgt ccccactgcg aaatgcaatg cgcttcatct atgacaaata
     1201 agctgattct ttgttttaat agtaagtttt tcaccgtttc attatttagc atttctggtg
     1261 ataaaaaaat aaatttatat aaatggatgt ttgcaaggac ttgccctttt tcttctcgtt
     1321 ttaaaaagct attaagcgct gctactcgct tttctccgtg agcacgcatt cgctccattt
     1381 gatcttgcat aagggagaga agtggagaaa caatcaatac taatccatcc atcaaatgac
     1441 ccgctaattg ataacaaatg gtttttccag ttccagtagg taacatagca aaacaatttc
     1501 gctttgctaa agctgtttca attacttctt tttggccagg gcggaactca tcaaaaccaa
     1561 gatattcttt taattccttt tctaagttca ctgcttaccc tccctactaa caactgctaa
     1621 ccgaatttga taataatcca aatcaggaaa ctccgctttt atttcacgca gtaaattcca
     1681 tttctttgta ataatcgttt ggatgattgt ctcttctggt aaataaggaa cattcgcttc
     1741 tttcaaagta gctcggattt ctacaaagtg atcatggatg gtactctttt tcaaattccg
     1801 aattcgctcg attgcttcta aatcagctcc attttgccat aatacatagg tttgcatggc
     1861 agaactagtt aacccattga gctcatccgg tacaagacta gctagaatcg gccattcttc
     1921 gggggttttt ttcatcgcta taagcaaacg gtgaacctca tggagcacct caaaataaac
     1981 gtcccacttc tccacttgat attttgaggc aatttgttct gtagtatagc ccattaattc
     2041 gcccccagaa aaacgttcca ctaaaaacgc tggtcgagca actgctaatt tattcatcca
     2101 tgcaacgagt tcaccgtata actgattcgc taaattagat ttatctcggt gcttcaccca
     2161 atgcttaata aattgttgga ctttcttatc acgaataact ggtaaataat agctttcatg
     2221 atgatgaatg ttactaacaa cttgaactgc gagtcgcaaa tgggcaaaaa aagcaaaagc
     2281 ttgcccttga aatgtaaaac cttggaagtt tgggtaatca ttttcaaaca tagctactag
     2341 ttgcccttgt gtcacataac cattttcagt agaaagaatg ctaccttggt gcactaattc
     2401 cgaaattcgt ttttctaaat agcttgcttt taaatttggc actagtccaa ataaatgttg
     2461 catttgaaaa agatggatat cttgaacagc ttgtccagtt cttcttccag ctaaaacagt
     2521 atgtaaaaat ggtaattttc taggtgtgat acttttttct aaaattgtca taatatagtt
     2581 atctagctta tccaagacat gtccaccacc tttttttgta ccataatcat aacacagaaa
     2641 cacttgttct acattaattt ttccgaaaaa actttttcaa aatatggtac aatagaaaaa
     2701 gaaaaaatct ggctgcaaat agttatttta gaaaggaagc gtagaaaatt gaagtattgt
     2761 cttgtcgaaa aagacacttg tattgcttgt ggcgcttgtt ccattcatgc acctgatgtt
     2821 tttgattatg atacagaagg tcttgccttt aatatattag ataataacac tggaacaaaa
     2881 gtaatccccg aagacttggt tgaaacggtt attgacgcag aatttgcctg tccttcgctt
     2941 tctatcaaag tttccgatag ttcatttcat taataataca cgaaaaagga aggtttccgc
     3001 tgtttggaaa ccttcctttt ttatttttaa taaatattat ttcacttttc gtctccttag
     3061 agcaaatccc catagaagca ttgctaaacc agtcaaacaa aggccagccc ataaaaccca
     3121 ctgatttgtt tgatctcctg ttttaggaat gagtttgata tcgttggagt tagcagcgcg
     3181 ttgattgtta tcttttacgc ttcgtggttc attatcttgt aaccccgcat ctcctctatt
     3241 ttcaacctga atagtagcag ttactgacaa catttgtttc cctgcgtctt cagttccttc
     3301 atttggatct actgaatata taacttggta tttgcctgct ttgttcagat ttacttttcc
     3361 ttgcactttt acttgtgaaa atggaatatt ttttccatca cgtctagttg cttgaataaa
     3421 gctatctttc gcgttccatt tctcgcctac ttttatgaca cgatctttca ccatcaaaat
     3481 agaatggttt ttcaaaacag tgaccttagc aacagctttc acaccatcgt atacatagct
     3541 aatttcatat gttcccggtg ttttgctatc aactttacct gcgacagtaa tatctttgaa
     3601 tgctactttt tcacctgctt tattcgttgc atagtcaaaa ttatctttcg cattccaact
     3661 atttccagca taaaaactac tatcatgaat ttttacagtc gtttttcttg gtttcacggt
     3721 tacattaatc gtggcagaaa taccgtcata actgtaggta acttcataga cgcctggctt
     3781 tgttacatcc acggcaggat tttctttgac agtaatatct ttccatttca ctttttgacc
     3841 agctttatcg agcgtattgt cccaattatc ttgagctttc caattatctc caacataaat
     3901 cactgaatca tgggctcgca cagctgtttt gggatgttta acaattactt gaatggtttt
     3961 ggtaattcca gcataaacat atgtgatcgg gtatgttcct gcttgacttg tatcaacagt
     4021 tcccaagact tgtacgtcat taaaggatac tatatttcca tccttatccc tagcgctatc
     4081 aaaattatct tttgctgacc aattatcatc aatatacaga atagaatcat gtgcattaat
     4141 agctgttttg atttctttca cagttaaagt aacagtagtc gaggcaccat cataattata
     4201 ggtgatttga tatctgcctg ctttgttgac atctacttta ggctcttctt tcacttttat
     4261 atcagcaaaa gaaactggct tcccgtcttt atcaactgca ttatcaaaat tatccgccgc
     4321 tgtccatgct tctcctacat agattgacga gtcatgccca ttaattcctt ttttattttc
     4381 ttttacagta acagtaattg aacttacagt atcttcatac ttatacgtaa tcgtatatac
     4441 gcctgctagg tttgtgttta ctgttccaat aaccgtcaaa tcttttagac tcaaggcatt
     4501 gccatcttta tcaagtccac tgtcaaaatt atcacctgct cgccaagtgt cgccagtata
     4561 aattgtcgag tcgtgtgcat taatttctgt caaattttct ttaacttcaa ttttagcttt
     4621 tttagacact cctttgtacg tatatgtgac tgaatagatt cctgctgtat tagtatcaac
     4681 agatccttct acttggatgt ctccaaatgg aactgtttca cctactttgt ttagcgcact
     4741 atcaaagtta tcagttgccg tccatgtatc acccaaatac aaaatagaat catgtacatt
     4801 gacagttgtt aaatcttttt caactttcac ttgaataact acttccgctg ttttcccatt
     4861 tttagcaact tgataggtca acgggtaagt tccgccttgg ttagagcctt cttggatagc
     4921 ttttaattgc ttggcatcca cttttacgga actagtacaa tcttgtgcag tagaaagtac
     4981 acctgtcttc acttcttcaa aactagctgt ttttgctaaa gtaattgctt ccgtttcagt
     5041 tagcttattt gaatctttgt attctaaact aaaattcatt gcgccaagga taagtccctc
     5101 tttttggtct atcgtagcac ttggctcagt tatatataca ggtgcagtag attttttctc
     5161 tgtatcaaaa atatctttga ttgtaatacc aatatcagtt gttgcgattg ctttgtttcc
     5221 ggcagaaata ccaacaatta ttccagaacc atcattagca gtttgtgtag ttgctaaagt
     5281 cgtatcattg ctagtccatt tgtaaccatc tgtaatcgct tgaatattgt gaaagaacga
     5341 cggctcaatc gtatcttcta ccgcttctcc actagttgct cttactttcg gcaatgttac
     5401 ttttaaactt ttaccagctt gtacgatttt ggcgctaaga ttaactttaa gatcattatc
     5461 cggcgcgtat tccatgtaac cagcattaat gttttgtgat accggttgag ctggatcaat
     5521 ttcttttacc caacctttgt ctgtaccctt attggataca gtactattta tcgtattatc
     5581 ttgccccact tgtttcaaag taaactgatt tccagctctt tctggaaact tcactgcata
     5641 tttcccgtaa gataaattca aattgtaatt aaaggtgtat tttccatcag cattagtttt
     5701 aacgctgact ggctcaccat ttttcaagaa cggctcatag ttagaggtat tttcattcca
     5761 tttataaagt tcaacagttt cgtttgcgag tgctgtatct ccttgagctt tttcatacaa
     5821 accatttgca tctttatctt ggaaaagaaa accgcttgct tctaaaataa ttaattctgc
     5881 tccaacttta gttcctggta atgttccaga ataagcattc gtagttacac gatagtaagg
     5941 gttatataca tcgcgttcac ttattttatt tccctctgta gcagaattaa aagtttcatc
     6001 tacttttagt ggaactttga ttgtttgtgt ttcaccggga tcaatctttg tcttcacttt
     6061 gatacgaacc atgttgactt tcccataatc agagggaaca gcgctataga cactttctga
     6121 ttcatagtta tttttatttg cttctgttgc ataactaata tcaaattgtg ctttttgttc
     6181 atctgttaat tgcacagcat catttagttt catatcccac ttaaatgtct ccgtttggaa
     6241 tttagaacca aaattttgtc cggtctttgg aattggaata tagagttcaa aagcacttgc
     6301 tataccagta gatgtatttg taacacggac tgtataatcc gcttccgttc ctggtgtaaa
     6361 ataggaaact gtactatcgt caccttctac ataagatgct tttgctcctt ctccagccaa
     6421 atttaagaat gtttctactg tgactgcatc ttgctttgga acacttaaag tactgctatt
     6481 cgcagaaagc agacgttcat tttctattcc attttgattg acatcaagac ctgtatccat
     6541 gaaagtattc gcagctgtag cagcctttac atttgggcct ccccaagcaa gaagttgttg
     6601 gatgtcagta tgaagacttt tatctaatgt tacatcaatc gtagtatcat aacttaaatt
     6661 taaaaattta tgtttagaag gataaccaac atacctacca actgttgcat cttttgtttt
     6721 taaaacatac actttctctc cattcttggc ggtttctatt ttaatagaga actcgatctc
     6781 ttctccatct tgatccgtta acttaataga agacggaaga attttagtac catccaattg
     6841 acgaagatac acttcaggat cattaaggac tgtacgtgtc ccgtatggat agttaaataa
     6901 taccaatgta gcttttgtag taaatttatc tccagctcca gcagttttga ttacttgtcc
     6961 ttgttcatta taaaaattag ctgttccgtt cgccgctgtc gtaatattat cggcaacact
     7021 ataaacagaa gtacccgaga ctttcgtatt tacttcatct gcctcatccc aaatggatac
     7081 tttaaattga acagaagaaa tgcctggttt gacaatacca taggagtttg ttgattcctc
     7141 accaaaacca ccagattctg agtagcttgt atatcctgta gaaaaatcgc ctacattcgc
     7201 tttcacctca gtaaagtatt ctcctggttg aagtccgact gcatcagctt ctaagatagc
     7261 aatatttttc atactattct taggaagatt cccattgtat gtttgataag tatcatcaaa
     7321 attagttttg tattgaatat tagtgatatc attatctttt ctattcccat caaatgggat
     7381 gttaacaatt gaagcttccc agtttgaatc aaattcaatt tggaagactt gattagtttt
     7441 tgtcccggca gtatctttat tattaattcg aacattccct gcccaagttt cattatctgg
     7501 attaatattt ttgtttccca cgattagtgc cattttattt tcggtcgaat ctacaactcg
     7561 gcaagcatct aacgttgcct tagttgttaa atctgtagaa ttgtttgtta atgcatcaga
     7621 ttcaaatact ttatcgtcat atgtcgtgat gactgcatgt ggcactttag gagcggtata
     7681 tgttcctgct ggcgttcctt ttggtatttt atattttatc gcatataccg tatctgttac
     7741 tcctttaaag ttctgttgtt taaaatcgaa caccacttta ttctcttccg gataatgagt
     7801 aatcgtagta ttagcattct catttaaaag tgcatatttt tcatttacta ccccgacata
     7861 ttccatacct tctggataat aaagggtagt cgagacattc ttaggtgaaa agatattagt
     7921 tcctctttca tctacttgat tcattccatt tacaacagag taactttttg tatatgcata
     7981 agaatcttca tcatctgtac tcgctaatac atcaggtgtt ctaaaagatt tataccaatt
     8041 tctgaacata gtacttacat gtgtttgatt agcataacca accactttat ttccttctgc
     8101 acgaattgct ttttcttctg aagcaatcgc cattttatta tctcccacaa aagcttctac
     8161 tttaataggg gcttttagat cagttgcacc atagtattta ttagcatcta cacgaacaga
     8221 aaagttaaaa cttacttttt ctgttcctgg agtaagttta taattaactg tcccgaaagt
     8281 agctttatcg taggttgttt ctttgtttgg aatagtaacg gatgttattg cagtaccaat
     8341 cgggtccccc gcacttaaac gatttatcac cccagagtcc acacctgttg atacttgaaa
     8401 actgctggga acgggaattg atacaaatct cataccgtct ggcagtgtga attccacctc
     8461 tttactagta gatgtactat tactaaagtc tactgtaaca ttaacatctt tgatatcgcc
     8521 atttgcccaa gcagtaccat cataagcagg aatatttaat gtgacagtag catcattacc
     8581 tgattttagt tgattattct ttagaggtgc ttttgtttca ttttgtttaa ctgaatcttt
     8641 tgattggtta gcttcttctt tttcaattat taaatttttt acttcatagg aagctttaaa
     8701 tgttttaatc tctgtttctt ttccttctat gttttcttta tagctaataa taaaattaac
     8761 atcaccattt ttttcagccg tgtactcggc ttcttttccc tcaattttat taccgtctgg
     8821 tgtttcaata cttagaattt caacttgatt attattagat gttgctttaa ttttaagctt
     8881 tgctttcttt ttatcttttg aaagctcttc ttgaacttca taagaaagtg gttcttcgcc
     8941 tttttcttct gcaaatgctt gaaaaaccgt taaatttagt tgacttacta c
//
LOCUS       DASDYK010000104         8948 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.104, whole genome shotgun sequence.
ACCESSION   DASDYK010000104 DASDYK010000000
VERSION     DASDYK010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8948)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8948)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8948
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.104"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..4142
                     /locus_tag="U0308_002344"
     CDS             <1..4142
                     /locus_tag="U0308_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="collagen binding domain-containing protein"
                     /protein_id="HEM2317304.1"
                     /translation="SFEIKNKKTGETKEVSITEHGTIIENSLSEGEYIVKEKKAAPGY
                     TLDEQTYNVTLAVKEEAITSSSTKKEAEKTPSVTEQPSKKGNLKAVITDNIFTAVKVE
                     NGTGNELGATNRIKNGGAVVLKMNFTFSGKNYKAGDTFKTVLPDSFNFGTTNLTGDFL
                     PSTEAKWDLNASTRELTITFFKDGVQEGNYDIELSTALKSFSETEKTSQVAVFNTAGG
                     NTVYQLEIIPEVDKATQVMLEAMPSKVNPDKATVDARFNLTKETSELGELRLSDTAYG
                     GSTIINRNSIKVYSTDISAKGTFIGSKQLLTENTDYELIYAPSGLTIKLKEGLKAKGY
                     QVTYERSIDKTNSSLSTIGTSATTVGSSGMLSNGSMTISVTIKAYDHLIKKAVYNPVT
                     QCIDWTINVNYDLANLTPGTVLTDVLTDDNVSYVADSLKIKRVTFNEESGEAVIGDDA
                     SNDWTVSTISDNGSFNMNYKKTDEKAYQVTYSTKLTDFSPRKIKNEVTDEKGVKATEN
                     FDFKPDLLNKEAGEIDYYNNTMDWTITVNSEGINMQNINIVDEFSTGVKSLVSYNVYA
                     YPSDSGYKLLTEGRDFTIQKDVSPAGFKIKLIGNYATTDNKIVVKMKTKIDLTDGAKT
                     LDNKASFSYFDGSLTQYSETIKAEATPETSILANGGKVGKWNPATGEINWIVSVNAMG
                     KKYDKLVLDDEFLDGTTFVEGSLQYRNVVNSSELTDLSIPLEIKGTLAQVGDANYPTK
                     IDTSANKIHLEFGNLDTNRVFVKYKTKPKDNWFFSQWVNNKAIVSDNGADEQIYETKE
                     FAFLQNEVIKVAGNIDNVYGNKVNWNMELLNISPERTLSNPVITNRLEQGNTGAQFIK
                     NSFQVINTKTNEPINEENYDIIFEGNTFTIQFKNYTAMAPIKVSYSTISLLSGPISNE
                     TTVEAEDFSNVPMFFKKRNAAVSPVFTVGSGSGIATIGTIKITKVDEDDTTKKLEGAK
                     FQLYTLDGEKSGQEIKTNSEGEILLDGIQSGKYKLVETEAPEGYNISDEYKEGKEITV
                     NSSGEELLLTIKNAMKKGKVILTKKDSASDEVLADAEFELQNAAGSKLKEKLTTAASG
                     NIEITDLAPGDYKLIETKAPAGYQLDATPVHFTIDFNQSEAAKVSKTNTAKTGTVVLT
                     KKDSATNTELADATFELRNEDGALVRENLVTDDNGEISVADLAPGDYKLIETKAPTGY
                     QLDAAPVHFTIDFNQTEAANVTKTNKKKIGTIIVKFIDVEGNQLNDEEMHTGNVDEEY
                     NVKAKEIVGYTLVKDSANKKGMYKETSQEITFVYEKKAMPIIVEPTEPSKPTEQLTES
                     ATVAEPKPIKQNFKTTNKSTNNKRKLPSTGDEFPYTMLFIGLFVSVAGVFFLKKPKQI
                     K"
     gene            complement(4182..4529)
                     /locus_tag="U0308_002345"
     CDS             complement(4182..4529)
                     /locus_tag="U0308_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HEM2317305.1"
                     /translation="MNDHRILNALSYFSILFAPVIVPVLIWIFAKSEDVTHHAKVALL
                     THIIPTIAGVLCFSSVFVTALTNGGLLANVSFFVTGSLFIFTLIAIVGLFIFNIVRGI
                     QMLLTKNEEDAWI"
     gene            complement(4635..5198)
                     /locus_tag="U0308_002346"
     CDS             complement(4635..5198)
                     /locus_tag="U0308_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2317306.1"
                     /translation="MDRRIKKTKQALNQALFTLLDEKTFQQITITDIVTVADVNRGTF
                     YKHYRDKEELLDSIIDEVLADLQKAYQDPYTHKTPFSIQTLTPSMIKIFDHVYGHQAF
                     YTQVIKSTIRPSFQNQVCDVIRELILNDFDYSADSSSIEPLLLASYQAHAIFGMIVFW
                     AEESFAHSPAFMSEQLLHIIQTKNPIL"
     gene            5382..6143
                     /locus_tag="U0308_002347"
     CDS             5382..6143
                     /locus_tag="U0308_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2317307.1"
                     /translation="MGKLNGKVAVVTGAASGMGQQIAILFAKEGAKVVVADLNLEAAQ
                     KTVALIEKEQGTSLAVVANVTKQDDIESMINKATETYGTLDILVNNAGIMDNFVPAGE
                     LTDELWDKVFAINTTGVMRATRKALHIFEEKGQGVIVNIASAGGLFGSRAGAAYTASK
                     HAVVGFTKNVGFQYANKNIRCNAIAPGAVNTNIGTTIYAPDQFGQERAMIGMGTNPRA
                     GDASEIAKVALFLASDDASFVNGTVITADAGWTAY"
     gene            6322..7395
                     /locus_tag="U0308_002348"
     CDS             6322..7395
                     /locus_tag="U0308_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEM2317308.1"
                     /translation="MVQQLVSNAAILLAGFYIISLVYKEPITKELSINRKMVIGVWAG
                     LLGFALMIFGIPISNNVIVDLRHIPIIMVGFYGGPIPAIVSAVIITASRFLISVNSAA
                     MMAGVIMMLIGIITALFSKRLEKYNIWGVFILNIIACGFVVVNLHLILAKEPDFWINM
                     FIFVSIALVIGAVSAGLMKNMIKSKQLFQKYEQDSTLDYLTRLSNVRQFDEKINHVMD
                     DGSRQVTLMLIDIDYFKNINDTYGHDAGDAILKQLAIILKRNTSDGSEAFRNGGEEFS
                     IVLLDCPIEKGNFFAEQVRKETEDHDFMIPSGKLVKITISVGVSSSKDGANTSEGLFK
                     SADEALYKAKLTGRNRVCIADEN"
     gene            7501..8868
                     /locus_tag="U0308_002349"
     CDS             7501..8868
                     /locus_tag="U0308_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HEM2317309.1"
                     /translation="MFDLMDNLLGVQSFGELNKDMPTTLFVTDADGNILISNKFTALT
                     VGMSLEELLRCNVRDLVEDGVYNDSVTLEAIRTKQKKTKVINTKKGFSIRSTSTPILY
                     PDGTVHLVVTMSDETQPDSFKTWRGEAISGNKESLLLEDYKENDGTVIVAESVAMKQI
                     VRVCNQIAPFDSKVLLYGESGTGKEVLSRYIHEKSEQAAGPFISINCAAIPKALFESE
                     LFGHEKGSFTGADIEKPGMLELADGGTLFLDEISEMPLELQAKMLRVLETGEVRRLGS
                     TTETKRRFRLISATNRNLGEMVEKGTFRRDLYYRINVVPVHIPALRERPQDIIGLARQ
                     FIQKFNQKYQKDFQLSGDKTKELLSHNWPGNVRELRNQIERLVVMSGNKEVTVAEIDD
                     FALDLHFKEQTKKDSLYLKDYLQDVEKHFILRVLEESNGNVTKAASVLGIHRSVLYRK
                     LKTLH"
BASE COUNT         3235 a         1379 c         1804 g         2530 t
ORIGIN      
        1 cttcttttga aattaaaaac aaaaaaactg gagaaacaaa agaagtttct ataactgaac
       61 acgggacaat tatagaaaat tcactttcag aaggagaata tattgttaag gaaaagaagg
      121 ctgctccagg atatacttta gacgaacaaa cttataacgt cactttagct gttaaagaag
      181 aggctataac ttctagttca acaaaaaaag aggcagaaaa aactccatct gttacagaac
      241 aaccctctaa aaaagggaat ctgaaagcag ttataacaga taatattttt actgcagtaa
      301 aggtggaaaa tggaactgga aatgaacttg gtgcgactaa ccgtataaaa aatggcggag
      361 cagtagttct gaaaatgaat tttactttct cagggaaaaa ctacaaagct ggagatacat
      421 ttaaaacggt tttaccagat tcattcaact ttggaacgac taatttaaca ggagatttct
      481 taccttcaac tgaagcgaaa tgggatttga atgcaagcac acgtgaatta accattactt
      541 tttttaaaga tggtgtgcaa gaaggtaatt atgatattga gcttagtact gctttaaaaa
      601 gtttctctga gacagaaaaa actagtcagg tagcggtgtt taatacagcg ggtggtaata
      661 cagtttacca gttagagatt attcctgaag tagacaaagc cacacaggta atgctagaag
      721 cgatgccgag taaagtcaat ccggataaag ctactgtgga tgcgagattt aatttaacta
      781 aagaaactag tgaactaggc gaacttagac tatcggatac tgcttacggg ggttcgacta
      841 ttattaatag gaatagtatt aaggtctact caacagatat tagtgctaaa ggaacattca
      901 ttggctcaaa gcaattactt actgagaata cagattatga attgatttat gcaccttcag
      961 gattaacaat taaattaaaa gaaggtctaa aagcaaaagg gtatcaagtt acctatgagc
     1021 gttccattga taagacaaat tcgtctttga gtactatcgg gacttcagca acaacagttg
     1081 gaagttctgg catgttatca aatggaagta tgaccatttc agtaacaata aaagcatatg
     1141 atcatttaat taaaaaagca gtttataacc ctgtaactca atgtattgat tggacaatta
     1201 atgttaatta tgatttagca aacttgactc ctggtacggt tttaacagat gtattaacag
     1261 acgataatgt tagttatgtt gcagattctt tgaagattaa gcgagtcact tttaatgaag
     1321 aatcaggaga agcagtaata ggcgatgatg cgtctaatga ttggactgtt tcgactatat
     1381 cagacaacgg tagttttaat atgaactaca agaaaactga tgaaaaagca tatcaagtaa
     1441 cgtattctac aaaactaacc gattttagtc cacgaaaaat taaaaatgaa gtaacggatg
     1501 aaaaaggtgt taaagcaaca gaaaactttg atttcaagcc agacttacta aataaagaag
     1561 ctggagagat tgattattat aataatacaa tggattggac tattacagtt aattcggaag
     1621 gtattaatat gcaaaacatt aatatcgttg acgagttttc tacaggtgta aaaagtttag
     1681 tcagctacaa tgtgtacgct tatccttctg attcaggcta caaattatta acagaaggta
     1741 gagactttac catccaaaaa gacgtctcgc cagctgggtt taaaattaaa cttatcggta
     1801 actatgcgac aacagataat aaaattgttg tgaaaatgaa aacaaaaatt gatttaactg
     1861 atggagcaaa aacactagat aataaagcct cgttttcata ttttgacggt agtttaaccc
     1921 agtattcaga aacaataaag gcagaagcaa caccggaaac tagtatttta gctaacggtg
     1981 ggaaggtcgg taaatggaat ccggcaactg gtgaaataaa ttggattgta tctgtcaatg
     2041 caatggggaa aaaatatgat aaattggttt tagatgatga atttttagat ggtacaacct
     2101 ttgttgaagg atctttacag tatcgtaatg tagttaattc atccgagctg accgacttga
     2161 gtattcctct agagataaaa gggactttag cacaagttgg ggatgctaat tatccaacca
     2221 aaatagacac atcagccaat aaaatacatt tggaatttgg taatttagat actaatcgtg
     2281 tatttgttaa atataaaaca aaaccaaaag ataattggtt cttctcacag tgggtaaaca
     2341 ataaagctat cgtctcagat aatggagcag atgaacaaat atacgagacg aaagagtttg
     2401 cttttttgca aaatgaagtt attaaggtag ctggaaacat agataatgtc tatggaaata
     2461 aagtgaactg gaatatggaa ctcttgaata tttctccaga aagaacactg tctaatccgg
     2521 ttattaccaa tcgattggaa caaggaaata cgggcgctca gtttattaaa aatagttttc
     2581 aggtaattaa tacaaaaacg aacgaaccga taaacgaaga aaattatgat attatttttg
     2641 aaggaaatac ctttaccatt caatttaaaa actatactgc aatggcgcca ataaaagtaa
     2701 gctacagcac aataagttta ctttcaggac caatttctaa cgaaacgacg gtggaagcag
     2761 aagattttag taatgttcca atgttcttta aaaaaagaaa tgcagcagta tcaccagtct
     2821 ttacagtggg atctggatca gggattgcaa cgattggcac gattaaaatc acaaaagtgg
     2881 atgaagacga tactacgaag aaattagaag gcgcaaaatt tcagctttac acactagatg
     2941 gtgaaaaatc tggacaagaa ataaaaacta attcagaagg tgaaattcta ctagatggta
     3001 tacaatctgg gaagtataaa ttagttgaaa cagaagctcc agaaggatac aacattagcg
     3061 atgaatacaa agaaggaaaa gaaattactg ttaattcatc tggtgaggaa cttcttttaa
     3121 ccatcaaaaa tgctatgaaa aaaggcaagg ttattttaac gaaaaaggac agtgcatcag
     3181 atgaagtatt agcagatgcc gagtttgaat tacaaaacgc cgctgggtca aaactaaaag
     3241 aaaaactaac aacagctgcg agcggtaata tagaaataac cgatttagca ccaggcgact
     3301 ataagttaat tgaaaccaaa gccccagctg gttaccaatt agacgcgacc ccggttcatt
     3361 tcacaattga ttttaaccag tcagaagcag cgaaagtaag caaaaccaac acagcaaaaa
     3421 caggcacggt agtgctaacg aaaaaagata gcgcaacaaa taccgagcta gctgacgcca
     3481 catttgagtt gcgaaacgag gacggagcat tagtccgcga gaatctcgta acagatgata
     3541 atggagaaat tagcgtagct gatttggcac caggcgacta taaattaatt gaaaccaaag
     3601 ccccaactgg ttaccaatta gacgcggcac cagttcattt cacgattgat tttaaccaaa
     3661 cagaagcggc taatgtaacc aaaaccaaca agaaaaaaat tggtacaatt atagttaaat
     3721 ttatagatgt agagggcaat caattaaatg atgaggaaat gcatactgga aatgttgatg
     3781 aagaatacaa tgtgaaagct aaagaaatcg ttggctacac attagttaaa gattccgcta
     3841 acaaaaaagg tatgtataaa gaaacttcac aagaaataac ctttgtttat gagaaaaagg
     3901 caatgccgat tattgtggaa cctactgaac catcaaaacc aacagaacag ctaacagaat
     3961 cagctacagt agcagagcca aaacctataa aacaaaactt taaaacaaca aacaaatcaa
     4021 caaataataa gagaaaactt ccttctacag gagatgagtt cccttataca atgctattca
     4081 ttggattgtt tgttagtgtt gctggagtat tcttcttaaa aaaacctaaa caaataaaat
     4141 aaaaaaaagc tatcctaaga aatttaggat agctttttca tttaaatcca agcatcttct
     4201 tcatttttcg ttaaaagcat ttgaatacct cgaacaatat taaagataaa cagtccaaca
     4261 atagctatta gtgtaaatat aaataagcta ccggtaacga aaaatgatac atttgcgagt
     4321 aagccgccat ttgtcaaagc tgtaacgaaa acactggaga aacatagaac accagcgata
     4381 gtcggaataa tgtgagttag taatgcaact ttagcatgat gagtaacatc ctctgattta
     4441 gcaaaaatcc aaatcaatac tggcacaata acaggtgcaa ataggatact aaaataactt
     4501 aaagcattta aaatacgatg atcattcata atcaacacac ctttctaaga tgtctttatt
     4561 atagcaagac taggattatg aagccctcgt ttcaagttac aaagaaggaa aataatataa
     4621 caaatatgta agaattataa gattggattt ttagtctgaa taatatgaag aagttgctct
     4681 gacataaacg ccggtgaatg agcaaaactt tcttctgccc aaaaaacaat catgccgaaa
     4741 atcgcatgtg cttgataaga tgcaagtaac aagggctcta tactcgaact gtcagctgaa
     4801 taatcaaagt catttaaaat cagttcccga ataacgtcac aaacttgatt ttgaaaactg
     4861 ggacggattg tcgattttat aacttgtgta taaaaagctt gatgaccgta tacatgatca
     4921 aaaattttta tcatggaagg tgtaagtgtt tgaatggaaa aaggcgtctt atgtgtataa
     4981 gggtcttgat acgctttttg taaatcagcc agcacttcat caataatact atctaaaagt
     5041 tcttctttgt cacggtaatg tttatagaac gtgcctcgat taacatctgc tactgtaaca
     5101 atatccgtaa tcgtaatctg ttgaaaagtt ttttcatcaa gaagagtaaa taaagcttgg
     5161 tttaaggctt gttttgtttt tttaatcctt ctatccatca tttgaaactc ccatccgaga
     5221 aaatttccta ctactataca tataacgcaa aagtgttgct taatcaacaa aacaggcttt
     5281 ctttacatat tgatagcgct ttatatcgga gctataatta aaataagaag gagagaaatt
     5341 ttatcctttt tagcgtaaca aaagtgaagg aggaaataac aatggggaaa ttaaatggaa
     5401 aagtagccgt agtaactggt gcagcgtctg gaatggggca acaaattgcg attctttttg
     5461 cgaaagaagg ggcgaaggtt gttgttgcgg atttaaattt agaagcggca caaaaaacag
     5521 tagcgttaat tgaaaaagaa caaggtacat cacttgcggt tgttgcgaat gtcacgaaac
     5581 aagacgatat tgaaagcatg attaacaaag ctactgagac atacggcacg ttagatattt
     5641 tagtaaacaa tgcgggcatc atggataatt ttgttccagc cggcgaatta actgatgaac
     5701 tttgggataa agtgtttgcg ataaatacaa ctggtgtaat gcgagcaact agaaaagcac
     5761 ttcatatctt tgaagaaaaa ggacaaggtg ttatcgttaa tatcgcatct gctggaggtt
     5821 tgtttggttc aagagcaggg gcagcgtata cagcttctaa acatgctgtc gttggtttta
     5881 caaaaaatgt tggtttccag tatgctaata aaaatattcg ctgtaatgct atagcacctg
     5941 gagctgtaaa tacaaatatt ggtactacta tttatgctcc agatcaattt gggcaagaac
     6001 gagctatgat tggaatggga acaaatcctc gagctggtga tgcttctgaa atcgccaaag
     6061 tagctctatt tttagcttcg gatgatgcta gttttgtaaa cgggacggta attacagcag
     6121 acgctggttg gacagcttac taaaaatata aaaaatccgc atgagagaat tattttcttt
     6181 tgcggatttt ttatgagaaa atagaaagat ggatattttt taacaacttc gcgtttaggg
     6241 gttgtttctt tgtgtagaga gaatgaatag ttgtgagcat aatggggtat taaataacaa
     6301 agtgaaaggc ggggatgctt tttggttcaa cagttggtaa gtaatgcagc gatattactc
     6361 gcaggatttt atattatttc tttagtctat aaagaaccaa ttacgaaaga attatcgata
     6421 aatagaaaaa tggtgatagg cgtatgggca gggctactag gatttgcgct aatgattttt
     6481 gggataccga tttcaaataa tgtaattgtt gatttgcgtc atatccctat tattatggtg
     6541 ggtttttatg gcgggcccat tccggcaatt gtttcggcgg tcattattac agcttcacga
     6601 tttttaattt cagtgaattc tgcagcgatg atggctggtg taatcatgat gctgattggc
     6661 attataacag ctcttttcag caaacgctta gaaaaatata atatttgggg cgtttttatt
     6721 ttgaatatta ttgcgtgtgg ttttgtagtc gttaacttac atttgatttt agcaaaagag
     6781 ccagacttct ggataaatat gtttatattt gtatcgatcg cgcttgtaat tggcgctgtt
     6841 tccgcaggtt taatgaagaa tatgattaaa tcaaagcaat tgtttcaaaa atacgaacaa
     6901 gactctacgc tcgattatct gacgcggtta tcaaatgtaa ggcaatttga tgaaaaaatc
     6961 aaccatgtaa tggacgatgg aagtaggcaa gtgacattaa tgttaatcga tattgattac
     7021 tttaaaaata ttaacgatac atacggccat gacgctggtg atgccatttt gaaacaatta
     7081 gctattattt taaaacgaaa cacatcagat ggttctgagg catttagaaa cggcggggaa
     7141 gaattttcca ttgtcttatt agattgtccg attgaaaaag gtaatttttt tgctgaacaa
     7201 gtgcgaaaag aaacggaaga tcacgatttt atgataccga gtggaaaact agtgaaaatt
     7261 acaatttccg ttggggttag cagtagtaaa gatggtgcta atacaagtga aggattattt
     7321 aaatctgctg atgaagcgct gtataaagca aaattaaccg ggcgaaaccg agtatgtatt
     7381 gcagatgaaa attagcttgt cgcaaaaaaa cgagtacttc taggagatag cttatgttat
     7441 aatagattgt gtaatgatga gcaaataact aggaaactag tccaaaagga tgagctttta
     7501 atgtttgact taatggataa cttgctggga gtacagtcat ttggtgaatt aaataaggac
     7561 atgccaacga cactttttgt cacggatgca gatggtaata ttttaatttc taataaattc
     7621 actgcgctca cagttggaat gtcgctcgaa gaattgcttc gttgtaatgt aagagaccta
     7681 gtggaagacg gtgtatacaa tgattctgtc acactagaag caatccgcac aaaacaaaag
     7741 aaaacaaaag tgatcaatac gaagaaaggt tttagcatcc gctcgacttc tacgccaata
     7801 ctttatcctg atggcacggt gcatttagtt gttactatgt cagatgaaac gcaaccagat
     7861 agttttaaaa catggcgtgg tgaggcaatt tcggggaata aagagtcgct tcttcttgag
     7921 gattataaag aaaatgatgg cactgtgata gtagcagaga gcgtcgcgat gaagcagata
     7981 gttcgtgtgt gcaaccagat cgctccgttt gacagtaaag tcttattata cggggagtcc
     8041 ggtactggta aagaagtctt gtcgcgctat attcatgaaa aaagtgaaca agctgctgga
     8101 ccttttatct cgattaactg tgcggcaatc ccaaaagcat tatttgaatc tgagcttttt
     8161 ggacatgaaa aaggttcatt taccggtgcg gatattgaaa aacccgggat gcttgaacta
     8221 gctgatggtg gcacattatt tttagatgaa atttctgaaa tgccactaga gctacaagcg
     8281 aaaatgctcc gagtgcttga aactggagag gtaagaaggc ttggttcaac aaccgaaacg
     8341 aaacgccgct ttagactgat ttcagcgacc aatcgaaacc ttggggaaat ggttgaaaaa
     8401 ggaacattta ggcgtgattt atattatcgt attaatgttg tgccggttca cattccagca
     8461 ctcagagagc gaccgcaaga tattattggt cttgcacgtc agttcataca aaaattcaat
     8521 caaaaatacc aaaaagattt tcagttaagt ggcgataaaa cgaaagaatt actttctcat
     8581 aattggccag gaaatgttcg tgaacttaga aaccagattg agcgattagt tgttatgtct
     8641 ggaaataaag aagtgactgt tgcagaaata gatgatttcg cactagactt acattttaaa
     8701 gaacaaacaa aaaaagactc actttatttg aaagattatt tgcaagacgt ggaaaaacat
     8761 tttatattgc gagtactcga agaaagtaat ggaaacgtga caaaagcggc cagtgtgctt
     8821 ggaattcacc gctctgtttt atatcgaaaa ctaaaaacac ttcattaaat agaaggccta
     8881 atcggatttt gcgattaggc cttttttgtt gcattttcgc gacttctgtt tgtaaaaacc
     8941 atcatttt
//
LOCUS       DASDYK010000105         8879 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.105, whole genome shotgun sequence.
ACCESSION   DASDYK010000105 DASDYK010000000
VERSION     DASDYK010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8879
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.105"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..1033)
                     /locus_tag="U0308_002350"
     CDS             complement(<1..1033)
                     /locus_tag="U0308_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HEM2317310.1"
                     /translation="MVKRRVPATRYPHNLEKSYTKQLVKLSTALSDMFLHEFDTSISA
                     ILKTSQNRSDAFREDGISDAVQAVLNKVKALSFGLFNPRDKYSIASKHVKAINTTNKS
                     QIGNQVRSQGIEPTQSEPWLSEFMDASIAENVSYIGSIADEFNAKTEQIILRGVKNGQ
                     SLKDMRDELVTQVGTSKNKAEFIANDQTGTIFGQMTAERHKKAGIPGFTWRDSGDAAV
                     RPSHHARNGKVYSYDDPTAQIPGTDYRCRCTAGPEFDESVVKAATNERKQQELEDKAT
                     LKNAYSEVAQAAQKAPDNVKDLISSNITANSFEIVRDNNIAYAYRPSTKKIIINPSNK
                     AIKYYNKQEI"
     gene            complement(1026..2411)
                     /locus_tag="U0308_002351"
     CDS             complement(1026..2411)
                     /locus_tag="U0308_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1073 domain-containing protein"
                     /protein_id="HEM2317311.1"
                     /translation="MYSIDKAKQAKIDSKIVNRNDFMVGHGKANSRDKLTRQVPGNGQ
                     KLDIKACENLYASNSIAMNIIDIISEDMVRAGWSLKTDNKEIKKNIESKWRKLKTKDR
                     FQKLYADKRLYGDGFLSIGVVSSNREQADLSTAIDPKTIKSIPYINTFNTQKVTQLYL
                     NQDMFSEHFGEVEFFEVNRVSQLGEEILSGTTASTSEQIHRSRIIHEQGLRFEGETKG
                     RSIFESLYDIITVMDTSLWSVGQILYDFAFKVYKTDDIDTLNKDDKANLTAMLDFMFR
                     TEALAIIKGDEQLTKESTNVSGMKDLLDYGWDYLAGAVRMPKTVLKGQEAGTLTGAQY
                     DVMNYYARVSSIQENRLRPQLEYLTRLLMWASEDCGPSIDPDSFEWAIEFNPLWNLDS
                     KTDAEVRKLTAEADQIYIVNGVLDPDEVKETRFGRFGLENSSKFSGDSAEIDKLAKLV
                     YDAYAKKSADG"
     gene            complement(2425..3885)
                     /gene="terL"
                     /locus_tag="U0308_002352"
     CDS             complement(2425..3885)
                     /gene="terL"
                     /locus_tag="U0308_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HEM2317312.1"
                     /translation="MLLASNNKEIDREYLYDEAVREIARREFAEFFFLSHGKRYNLLR
                     HQKLIADKLQKIIDGEQKHYIIEIPPQHGKSTVITETFPAYFLMRNPDKLAMVVSYSE
                     ELFKKFGRKNREKFRMYANDLFGLNISSMSSSVSNWGIEDHLGELYSTSILGGATGRG
                     SDLLIVDDPVKNRADADSKTMRDKVYSEWQDTFYSRLSASGSVIIIMTRWHEDDLAGR
                     LLKEMSLPWEEIKIPAIAEENDLLGRKIGEALAPEIGKDEKWAAQTKEVTGSRGWTAL
                     YQQRPSPADGNIFKRHWIKYYVPDAEFKKKYGLGDEVKILPRLFDKSAQSWDLTFKDT
                     KNSDFVAGHVWKRKQGEFFFIDREHDRMDLPASINAINRMTTKHPDVIAKYIEDKANG
                     PAVMQVLKGRLTGMIPVDPEGGKEARANAVSPLFEAGNVYFPHPLYKPWSEDVVEELV
                     AFPNTSHDDDVDALTQALVKLMIGQQSLLDRYKNLM"
     gene            complement(3863..4732)
                     /locus_tag="U0308_002353"
     CDS             complement(3863..4732)
                     /locus_tag="U0308_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317313.1"
                     /translation="MARKRDPRRIEAKNMWLESGGKMKLVDIANKLGCSSNQIRKWKS
                     TEKWSIDDEIESVPKSNSNVTNEKERYHKLKGNSNAIGNRGGAPPGNGNAVGNVGGSA
                     PIGNKNAVTTGEFETLSWEFLTEREQQLYESMDGNLVTHINQTIRELEIRKRRMMERI
                     ANIEKSMSDIERSTLKQLREKEYIGEKNGKKVILHRQELVTVEERERVTAKIDRILSI
                     ENSLNNVTSQLIRAIKQQSDLEQAEVKKGLIRSQTSLNKERIIKPEAASTSPDFSQMS
                     TEELKEYAASLKQ"
     gene            complement(4769..5002)
                     /locus_tag="U0308_002354"
     CDS             complement(4769..5002)
                     /locus_tag="U0308_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317314.1"
                     /translation="MTLIFWTKNGQEMEFDLVENVEIDEKIITFDYYGEGEKRGVAFI
                     LNNLAGMAVEDENSESESKDGASWFKVYRGYVK"
     gene            complement(5030..5260)
                     /locus_tag="U0308_002355"
     CDS             complement(5030..5260)
                     /locus_tag="U0308_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317315.1"
                     /translation="MKKENERSIDENLNDDLLDLEISKALEEAKTDEEYKKIIRATLG
                     KWLNNLQEGNIRLESVNDLKTLIEADRLLRRD"
     gene            complement(5390..5587)
                     /locus_tag="U0308_002356"
     CDS             complement(5390..5587)
                     /locus_tag="U0308_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317316.1"
                     /translation="MREDIQRLKDKADTAKMKYHRNLIDRETAKKQIIPYAEAFNSRS
                     KEIAKKYNQKPKLLSVAAFLR"
     gene            complement(5635..6972)
                     /locus_tag="U0308_002357"
     CDS             complement(5635..6972)
                     /locus_tag="U0308_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HEM2317317.1"
                     /translation="MNIQEIEVSKINPAAYNPRIDLMPGDLEYEKLKKSIEEFGYIDP
                     LIWNERTGNLVGGHQRYKILLEGKPENLTVSVVNLDINQEKALNIALNKIEGGWSTDK
                     LGELLKSINDEEMLNLTGFSAIEIDELIKEFELPPATVDKVKENPLDSNLFESFLFPP
                     FSYLDSKTKRWRDRKDQWKNLGIRSELGREGNLTFASSLRSSSLTGTSIFDPVLCELA
                     YRWFTPGESAKIYDPFAGGSVRGIVAKVLGHEYTGIDLRKEQVEANHINAKEIGLDGI
                     NWITDNSLNADKYIEDNAMDLLFTCPPYFDLEVYSDNKEDISNMEYEEFIKVYSEILD
                     KGANKLKDNRFAIVVISDVRDKNGFYRDLTGLTKSVFEKNGIYFYNDLILLNSLGSGA
                     LRARRNMRNRKLVRIHQNVLVFYKGNPDEIQEHFPILEVLEDNLEEALESIDI"
     gene            complement(6969..7262)
                     /locus_tag="U0308_002358"
     CDS             complement(6969..7262)
                     /locus_tag="U0308_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317318.1"
                     /translation="MKNFVYVVANVSDGNSLIDFFVKTKSNYITEINYREGYIILSNE
                     CWYFQVMNESDFADVGNVDGYRFSQKAKISLSKTGNYQTIRKKLSDLYKESSK"
     gene            complement(7791..8558)
                     /locus_tag="U0308_002359"
     CDS             complement(7791..8558)
                     /locus_tag="U0308_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HEM2317319.1"
                     /translation="MNNLAVLDKNNTLNSREVAEMVEKRHSDLLRDIETYIRYINQNA
                     KLRSDDFFSESTYQAGTGKDYKCYEITKMGCEMIANKLTGAKGIQFTALFVQKFNKLE
                     AKEMQTFYIPGTYAEALTLAAKQAELNEQLMLENEVKTQTIAEYEPKVSYYDQILKSP
                     GLITVTQIAADYDLTAHKLNKILYEEQVQHKVGGQWILYKKHMNLGLTKSETVSIVHS
                     NGRLGTKVNTKWTQKGRLFIHEILENVGIQAVIDKDI"
     gene            complement(8571..>8879)
                     /locus_tag="U0308_002360"
     CDS             complement(8571..>8879)
                     /locus_tag="U0308_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317320.1"
                     /translation="KLTSTLTIVPPSFNNEFHSTTEESAIWNVDAVNEAKAYVKLIDH
                     HINQLPERSRQVILTKFIEENSDYEAMLAIHVSHSQYKEEKRKAIERLAYQLNIVVEK
                     "
BASE COUNT         2377 a         1919 c         1359 g         3224 t
ORIGIN      
        1 atatttcttg cttattataa tattttatag ctttgttgct tggattaata attatcttct
       61 tagttgaagg acgataagca tatgcaatat tattatctcg cactatctca aaagaatttg
      121 cagtaatgtt actacttatt aagtccttaa cattatccgg agctttttga gcagcttgag
      181 ctacttcact ataagcgttt tttaatgttg ctttatcttc tagctcttgt tgtttacgct
      241 catttgtagc agctttaact acagactcat caaattcagg accagctgtg caacgacatc
      301 tataatcagt tccaggaatc tgtgcagttg gatcatcata tgaataaact ttaccatttc
      361 ttgcgtggtg tgatggtcta accgctgcat ctcctgaatc tctccaagta aagccgggta
      421 tgcctgcttt cttatgcctc tcggctgtca tctgcccaaa gattgttccg gtctggtcat
      481 tagcgataaa ttcagcttta ttttttgatg tacctacttg cgtaaccagt tcatcacgca
      541 tatcttttaa tgattggcca ttttttacac cacgcaaaat tatttgttct gttttggcgt
      601 taaattcgtc tgcaattgaa ccaatataac ttacattttc ggcaatcgaa gcgtccatga
      661 actcacttaa ccatggttca gactgtgtgg gctcaattcc ttgtgagcgc acttgattgc
      721 ctatttgtga tttattagtc gtatttattg ctttaacatg tttacttgca atagaatact
      781 tgtctcgcgg gttgaataat ccaaaactta gcgcctttac tttatttaaa acagcttgaa
      841 cggcatcact tataccatct tctctgaacg catcagagcg attttgagac gtttttagaa
      901 tggcactaat actggtgtca aattcatgta aaaacatgtc agataaagcc gtgctaagct
      961 ttactagctg tttagtataa ctcttttcta aattatgtgg atagcgagtc gcaggaacgc
     1021 gtcttttaac catctgcgct cttcttcgca tacgcgtcat agacaagctt agctaattta
     1081 tcaatttctg cgctatcacc actgaattta gaagaattct ctaatccgaa acgaccaaag
     1141 cgtgtttctt tcacttcgtc agggtctaat acaccattta caatataaat ctgatctgct
     1201 tctgcagtta gtttcctaac ttcggcatct gtcttactgt ctaagttcca aagcgggtta
     1261 aattcaatag cccattcaaa agaatctgga tcaatactcg gaccacaatc ttcacttgcc
     1321 cacatcagca atcttgttaa atattccaat tgcggtcgaa gtctgttttc ctgaatggac
     1381 gaaactcgcg catagtagtt cataacatca tattgcgcac ctgtaagagt accagcttct
     1441 tgacctttta gaactgtttt aggcattcga acagcacctg ccaaataatc ccatccataa
     1501 tcgagcaaat ccttcattcc tgatacattt gtcgattctt tagtcagctg ttcatctcct
     1561 ttgataattg cgagtgcctc agtacgaaac ataaaatcca gcattgctgt taaattcgcc
     1621 ttatcgtcct tatttaaagt gtctatatcg tcagttttat acactttaaa agcaaagtca
     1681 tacaaaattt gacctacaga ccaaagcgac gtatccatca cggtaataat atcataaagc
     1741 gattcaaata tggaccttcc ttttgtttcg ccctcaaaac gcaatccttg ctcgtgtatt
     1801 atcctcgaac ggtgaatttg ttctgaagta gacgctgttg ttccggataa tatttcttct
     1861 cctagttggg acacgcgatt aacttcaaaa aactcaactt caccaaagtg ctcactaaac
     1921 atatcttgat tcaaatagag ttgagttact ttctgtgtat taaaagtatt aatatatgga
     1981 atacttttaa ttgtttttgg atcgatagca gtgctcaaat ccgcctgttc ccgattactt
     2041 gatactacgc caatgcttag aaagccatcg ccgtaaagtc gtttatctgc ataaagcttc
     2101 tgaaatcgat cctttgtttt taacttacgc catttcgatt cgatgttctt ttttatttcc
     2161 ttgttatcag tttttaaaga ccaacctgca cggaccatat cttccgagat aatatctata
     2221 atattcatag caatactgtt agaagcatat aaattttcac atgcttttat atctaatttc
     2281 tgcccattgc ctggaacttg cctcgttaat ttgtcacgcg agtttgcttt cccgtggcca
     2341 accatgaaat cattcctatt aactatcttt gaatctatct ttgcttgttt tgctttatca
     2401 attgaataca tccgctcacc acctttacat taagttttta tatctatcta gcaacgattg
     2461 ttgacctatc atcaatttaa ccaaagcctg cgtgagtgca tccacatcat catcgtggct
     2521 agtattggga aacgcaacta attcttctac aacatcttcc gaccaaggtt tgtatagagg
     2581 atgggggaaa tatacattcc ctgcttcaaa caatggagaa acagcgtttg ccctagcctc
     2641 ttttccacct tcaggatcaa ccggaatcat acctgttaat ctacctttta atacttgcat
     2701 tacagctggt ccgttggctt tgtcttcgat atatttcgca ataacatctg gatgcttagt
     2761 cgtcattctg ttaattgcat tgatacttgc aggcaagtcc attctgtcgt gttctctatc
     2821 gataaaaaag aattctcctt gttttcgttt ccacacatgg cccgccacaa aatcgctgtt
     2881 ttttgtatcc ttaaatgtta aatcccaaga ttgtgcggat ttatcgaaaa gacgaggtaa
     2941 tatttttacc tcgtctccta gtccgtattt ctttttgaat tctgcatccg gaacataata
     3001 cttaatccaa tgtcgtttaa atatgttccc gtctgctggg cttggtcttt gttggtatag
     3061 ggcagtccaa ccgcgtgatc cagtaacttc ttttgtctgt gctgcccatt tttcatcttt
     3121 accgatttct ggcgccaatg cttcaccaat ttttctacct agcaaatcat tctcttcagc
     3181 gatagcaggg attttaatct cttcccaagg caaggacatt tctttcagta acctacctgc
     3241 taagtcatct tcatgccaac gagtcataat gattattaca ctaccgctag ctgataacct
     3301 agaataaaaa gtatcctgcc attccgaata tactttgtct ctcatggtct tactgtcggc
     3361 atctgcccta ttttttacag gatcatcaac tattagtaag tcgctccctc gcccagttgc
     3421 tccacctaga atagatgtac tgtatagttc tcctaaatgg tcctctatgc cccaattact
     3481 cacactagat gacatagaac tgatatttag accaaataaa tcatttgcgt acatcctgaa
     3541 tttctctctg tttttacgcc cgaatttctt aaaaagttcc tctgaataag aaactaccat
     3601 tgcaagcttg tccgggtttc tcattagaaa ataggcggga aaagtttcag ttattactgt
     3661 tgacttacca tgctggggag gaatttcaat aatataatgt ttttgttccc catcaattat
     3721 tttttgaagt ttgtcagcaa tcagcttctg gtgtctcaat aagttatatc ttttcccgtg
     3781 cgacaggaaa aaaaactctg caaattccct tctagcaatc tcccttacag cttcatcata
     3841 aaggtattct ctgtctattt ctttattgtt tgaggctagc agcatactcc ttcaactcct
     3901 cagtggacat ttgcgagaaa tcaggggaag tgctagctgc ttccggcttg ataattcgtt
     3961 ccttatttaa actagtttga gagcgtatta gccccttttt tacctccgct tgttctaggt
     4021 cactttgctg ttttatcgcc ctaattagct gactagtgac gttattcaac gagttctcaa
     4081 tacttaaaat gcgatcaatt ttagcagtca ctctttcgcg ctcctcaaca gttactagct
     4141 cttgcctgtg aagaataact ttttttccat tcttctcacc gatgtattcc ttttccctaa
     4201 gctgtttaag cgtgcttctt tcaatatcgg acattgattt ttctatgttt gcgatgcgtt
     4261 ccatcatacg ccgttttcta atttctaact cacggatagt ttggttaatg tgagttacta
     4321 aattgccgtc catgctctca tacaactgct gctctctttc tgttaaaaac tcccaggaca
     4381 acgtttcaaa ctcccctgtg gtaacagcgt tcttattgcc aattggtgcg ctaccgccaa
     4441 cgttaccaac cgcattacca ttccctggtg gtgcacctcc gcgattaccg attgcgttgc
     4501 tgttcccttt taacttatgg taacgttcct tttcattagt aacgttacta ttcgatttag
     4561 gaacgctctc tatttcgtca tcgatggacc atttttctgt tgatttccac ttccgtatct
     4621 gattagaaga gcagcctagt ttatttgcaa tatcaaccag tttcattttt ccgccggatt
     4681 caagccacat atttttcgct tcaattcttc gtgggtcgcg tttccttgcc atatcactgt
     4741 caccacctgt cttgtgttga gtttgttttt actttacata acccctgtac actttaaacc
     4801 aagatgcgcc atctttactt tcactctccg aattctcatc ctctacagcc atgccagcaa
     4861 gattatttaa tataaacgct acgcctcttt tttcaccttc tccatagtaa tcgaatgtaa
     4921 taattttctc gtcaatctct acattttcaa ctagatcaaa ttccatctct tgtccatttt
     4981 tagtccaaaa tataagggtc atgtttattc tccaatcttt caataaaaat taatctcttc
     5041 ttagtaatct atctgcttca attagtgttt taaggtcatt tacagattca agacgtatat
     5101 tgccttcctg caaattatta agccatttcc ctagtgtagc gcgaataatt ttcttgtatt
     5161 cttcatctgt cttagcttct tcaagagctt tacttatctc taaatctaat aaatcatcat
     5221 ttaagttttc atcaatcgaa cgctcgttct cctttttcat tgccttttca ccagctttct
     5281 attagaatag aaaaagagat agcaatgtct aaaacctcgc gaggtctgtt tgctatctca
     5341 cgccagtgat ggcggtatgg ggaaggggtg ttaacgcacc tcttcttttt tatcttaaaa
     5401 acgctgctac tgaaagtaat ttaggctttt gattatactt tttagcaatc tctttcgatc
     5461 tagaattaaa agcttcagcg tatggaatta tttgtttctt agctgtttct ctatcaatta
     5521 aatttcgatg atatttcatt ttagctgtgt ccgctttatc ttttaatcgt tgaatatctt
     5581 ctctcatgta caccactccg tttcctttat gctgatactg taagggatat tcgtttaaat
     5641 gtcgatagat tcaagcgctt cttctaaatt atcttccagt acctctaaaa tggggaaatg
     5701 ttcttgtatc tcatcaggat ttcctttata aaatactaat acattctggt gaatacggac
     5761 taacttcctg ttacgcatat ttctgcgagc tcttaatgct cctgaaccta gcgagtttaa
     5821 caaaatcaag tcattataga agtaaatacc attcttctca aataccgatt tagtaaggcc
     5881 tgttaaatcc ctataaaaac catttttatc tcgtacatct gaaataacca caatggcaaa
     5941 ccgattatct tttaatttat tcgcaccctt atctaatatc tcggaataaa ctttaataaa
     6001 ttcctcgtat tccatgttgc taatgtcttc tttattatct gaatatactt ctaaatcaaa
     6061 gtatggtggg catgtaaata ataagtccat cgcgttatct tcaatatatt tatccgcgtt
     6121 taagctatta tcagtaatcc aattaatgcc gtctaatccg atttctttag cattaatgtg
     6181 gttagcttct acttgttctt ttcttaaatc aattccagtg tactcatgcc caagaacttt
     6241 cgctacaatc ccccggacag aaccaccggc gaatggatcg tatatctttg cagattctcc
     6301 aggagtaaac catctatagg ccagttcgca aagcacgggg tcgaaaatgc tcgttcctgt
     6361 caaactagat gaacgcaaac tagatgcaaa cgtaagatta ccttctctcc ctaactcact
     6421 tctaatacct aaatttttcc attggtcctt cctatccctc cacctctttg tttttgaatc
     6481 taaatacgaa aaaggaggaa acaaaaaaga ctcgaacaga ttcgagtcta acgggttttc
     6541 ttttacttta tctactgtag ctggaggtaa ttcgaattct ttaattaatt catctatttc
     6601 aattgctgag aatcctgtta aatttagcat ttcttcatca ttaatgcttt ttagtaattc
     6661 gcctaattta tcagtactcc atccaccttc tattttattt aaagcaatat tcaatgcttt
     6721 ctcttgattt atatctaggt taactactga tacagttaag ttttccggtt ttccctcgag
     6781 taaaatttta taacgctgat ggccaccgac taaattacca gttctttcat tccaaatcag
     6841 tgggtcaata tagccaaatt cttcaattga tttttttaat ttttcatatt ccaagtcacc
     6901 aggcattaaa tctattctcg gattgtatgc agccggatta attttgctta cttctatttc
     6961 ttggatattc atttgctcga ctccttgtat aaatcactta atttcttgcg tatcgtttga
     7021 tagtttcctg ttttagaaag agatattttt gctttttgtg aaaatcgata accatcaaca
     7081 ttgcccacat cagcaaaatc actctcattc ataacttgaa aataccaaca ctcatttgat
     7141 aaaataatgt aaccttcacg ataatttatt tcggtaatgt aattactttt tgtttttaca
     7201 aagaagtcga ttaagctgtt accatcactc acatttgcaa caacatacac aaaatttttc
     7261 atgcgttctc tccttttcta cataaaaaaa cctccatatc agaacgtatc tgccctgggg
     7321 gtatggaggt attgacgttc aaagcactcg gcaaggattt gcaccttgca tgaactaagt
     7381 aatttttgct ataggtttct taagctaagg cttacgctcc ttagccatat tagttcttac
     7441 ctccaatgcg tctacctgtt ccgccacgag tgttggatat gatgcgtctc atatcagacc
     7501 aacgataaga tacaatgcct ctttctgggc aaactatata tttttaaatt gcgattgatt
     7561 tatgattaaa gcataatgcc ttgccaaaaa tatttacctg tagccacgat gatacatatc
     7621 gttttccgtc catgctatat ttagtcattt catgtttcat aattaccagc tcctatttct
     7681 tattttcttg acaataacat cttaccacgg aattccttgt tttttgtccg gtaaaaagcc
     7741 ggtaaaaagt cagcaaaaag tttaatttta tccggtaaaa agccggtttt ttaaatatcc
     7801 ttgtcgataa cagcctgaat tccgacattt tcaagaattt catgtataaa taatctccct
     7861 ttttgagtcc acttggtgtt tacttttgtt cctagacgtc cattactgtg aactatgctg
     7921 accgtttctg atttagtcaa acctaaattc atatgttttt tgtataatat ccactgacca
     7981 ccaactttat gctgcacctg ctcttcgtat aatattttat tgagcttatg tgcggtcaag
     8041 tcataatcag ctgcaatttg cgtaacagtt attaatccag gagattttaa aatctgatca
     8101 taataactca cttttggttc atattcggct atagtttgtg tttttacttc attttctaac
     8161 attaactgct catttagttc agcttgtttt gctgcaagtg taagtgcttc agcgtaagtt
     8221 cctgggatat agaaagtttg catttccttt gcttctaatt tgttgaactt ttgtacaaat
     8281 aaagctgtaa actgaatgcc ttttgcccca gttaatttat tcgctatcat ttcacagccc
     8341 atttttgtaa tttcatagca cttataatct ttcccggtgc cagcttgata agtagattca
     8401 ctgaaaaaat catcagaacg caattttgcg ttttgattga tatatctaat atacgtttcg
     8461 atatcacgca gtaaatcaga gtgtcttttt tctaccattt cagcaacttc acgactgttt
     8521 aatgtattat ttttatctaa tactgctaaa ttattcattg tgttccctcc tcatttttca
     8581 actactatat taagttggta ggctagacgt tcaattgctt ttctcttttc ttctttatat
     8641 tgcgagtggc ttacatgtat ggccaacata gcttcataat cactattttc ttcaatgaat
     8701 ttagttagta tcacttgcct actccgttca ggaagttggt tgatgtgatg atcaatcaat
     8761 ttaacatatg cttttgcttc atttactgca tctacattcc atattgcact ttcttccgtc
     8821 gtagaatgga attcattatt aaatgatggt ggcactatgg tcaatgtaga agttaactt
//
LOCUS       DASDYK010000106         8717 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.106, whole genome shotgun sequence.
ACCESSION   DASDYK010000106 DASDYK010000000
VERSION     DASDYK010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8717
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.106"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            224..1417
                     /locus_tag="U0308_002361"
     CDS             224..1417
                     /locus_tag="U0308_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     ATP-binding protein"
                     /protein_id="HEM2317321.1"
                     /translation="MSKIKVEELTKIFGKKASKASSLLSQGKSKTEILKETGATIGVN
                     KASFSVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTSGKIWLDGKELSSLNKKELLEV
                     RRKSMSMVFQNFGLFPNRTINRNVEYGLEIQGMDKEEREKNAAESLALVGLAGYGEQY
                     PSQLSGGMQQRVGLARALANNPDILLMDEAFSALDPLNRKDMQDQLLDLQDKMKKTII
                     FITHDLDEALRIGDHIMIMRDGSVVQTGSPEEILAHPANEYVEKFIEDVDRSKVYTAS
                     NVMIRPEIVNFEKDGPRVALKRMREAGTSSVFVVKRNRELVGIVHAAEVSKLVKENIT
                     SLETALHRDVPTTGLDTPLAEIMDTISTTTIPIAVTEDGKLKGIIIRGSVLAALSGNE
                     VNVNA"
     gene            1410..2258
                     /locus_tag="U0308_002362"
     CDS             1410..2258
                     /locus_tag="U0308_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline/glycine betaine ABC transporter
                     permease"
                     /protein_id="HEM2317322.1"
                     /translation="MPNIPTIPLASWIDKLVDGLTQFEGFFNVITNIIGGIVDAFQWV
                     FDLVPPWLFIILLVFGTFWVNRKGKKWGLIIFEVVGLLLIWNLDFWRDMTQTLTLVLT
                     SSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVV
                     ASVIFAMPPTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQ
                     SIMLALSMVVIASMIGAMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRLTQAFN
                     KKAKSE"
     gene            2272..3174
                     /locus_tag="U0308_002363"
     CDS             2272..3174
                     /locus_tag="U0308_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEM2317323.1"
                     /translation="MLKKLITTAVLAMLIFTLAACGTTLAPYDAKKDLGEQINYTITG
                     IDAGAGIMLATQNAIKDYHLDDDNWQLQTSSTAAMTSTLQKAMKDKRPIVVTGWTPHW
                     MFTKFDLKFLDDPKNVYGNAENIHTIVRKGLKEDKPSAYQVLDNFFWTAEDMSEVMLE
                     VNDGVDPEEAAKKWIKNNPEKVAKWTDGVEKVDGDEIKLTYVAWDSEIASTNVVAEAL
                     KQVGYKPTIQAMEIQPMWASVATDAADGMVAAWLPNTSGIYYKDYKGKFEDLGPNLKG
                     AKIGLAVPKYMTNINSIEDLKTSK"
     gene            3289..3780
                     /locus_tag="U0308_002364"
     CDS             3289..3780
                     /locus_tag="U0308_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HEM2317324.1"
                     /translation="MFKKFLKKSKQEVLFAHVTGQVIALEDVPDPVFNQKMMGEGIAI
                     KPETGTIVAPIDGKIIQLAETKHAFGIRTDMGQEILVHIGLETVSLNGEGFNVLVSVG
                     DKVKVGDPIVEADFDFIEKNAASTVVPMVITNSSEGKYDFDFHAVTKAEAGKTEVITT
                     NLK"
     gene            3892..4587
                     /locus_tag="U0308_002365"
     CDS             3892..4587
                     /locus_tag="U0308_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HEM2317325.1"
                     /translation="MLEVIVQNPRDAYLAEKYGANRMEVVSAISEGGLTPSYGAIKEI
                     VRASKLPAMMMIRPHSFSFVYDKAARIVMERDIELAKEVGVQGIVYGGITENGEIDQA
                     LLEKVIEWKGDLDLTFHRALEATKDIEASYQVLRTYGKDINQLLTSGGTANALDSLPR
                     LKRWIQDSEAQPDSFQILVGSGVKPENIATFQATLNHSDYHVGSAAREANDFSKDILK
                     EKIDILQQQINKD"
     gene            4668..5540
                     /locus_tag="U0308_002366"
     CDS             4668..5540
                     /locus_tag="U0308_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEM2317326.1"
                     /translation="MNNYIGKSQIMTVKEIKDTGWLLEKDGVTVFLSKSNTHETELAV
                     GAEVTVFIFVDYDREIAATTIIPKIQVGHYGWGTVTEVRKHLGVFVDIGIEKDVVVSL
                     DDLPALPHLWPKKEDRVMIALRVDEENRVWGVLAEEEQFRAIAVRAEQDLFNHNVEGT
                     IYRLLKVGSFVFTDDFHIGFIHESERTSEPRMGERVKARVIAVKPDGSLNLSLRGRAH
                     EVLNDDAEMILTYLRSVGGEMPFGDKSDPDAIRAKFGISKAQFKRAIGTLLKARRITQ
                     ENGVVTKITEETSD"
     gene            5675..6388
                     /locus_tag="U0308_002367"
     CDS             5675..6388
                     /locus_tag="U0308_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall-active antibiotics response protein"
                     /protein_id="HEM2317327.1"
                     /translation="MKKMESSVVFVFLIAIIVGVGLEMLFQWELLILFALGIFFIFTS
                     RKASATKKSARNSLFIGIVFIIIAVLLTTTFKVGLVVAGIYAIIHYISRKRAPQLLML
                     KTREPDSKIDRTDKFIRNQWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGE
                     SVIMIRSVSGKIRVLVPFDIGICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSA
                     RKVKIMTSVIFGDLEVIRL"
     gene            6385..7443
                     /locus_tag="U0308_002368"
     CDS             6385..7443
                     /locus_tag="U0308_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM2317328.1"
                     /translation="MSFSKLMMAVCSGLLLVATAIGTVGYYFFSEGSWYKILIEQKIF
                     YIPFVVFVPLTAISIGLIIGGLLGYFVKQKFESIDFSIRLLGQGDLEKKITSEEDENF
                     LEVQQVYKQIDRLRDKMKAQTILTQKLASDRAESTGQTKEAILSEERHRIARELHDSV
                     SQQLFAAMMLLSALNEQSEKSATPAMQKQLKMVESIVNESQSEMRALLLHLRPTQLEG
                     KSLKTGIEQLLKELTTKLPIEVEWQIEDISLQKGIEDHLFRIVQELLSNTLRHSKAKL
                     LEVRLVTMDNLAVMKVVDDGVGFDMDNVRQGSYGLQNMRERVAEFGGTIKIISFPGRG
                     TSVEIKIPLVAKKDVESE"
     gene            7440..8078
                     /locus_tag="U0308_002369"
     CDS             7440..8078
                     /locus_tag="U0308_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2317329.1"
                     /translation="MIKVLLVDDHEMVRIGVSAYLSVQDDMEVVGEAENGREGADMAL
                     ELRPDIILMDLVMDEMDGIEATKEIMQNWKEAKIIIVTSFIDDEKVYPALEAGASSYM
                     LKTSTASEIADAIRATYGGDSVLEPEVTGKMMQRLTAKPEKNLHDDLTNRENEILLLI
                     AEGKSNQEIADELFITLKTVKTHVSNILSKLDVQDRTQAAIYAFKHDLVEKK"
     gene            8097..>8717
                     /locus_tag="U0308_002370"
     CDS             8097..>8717
                     /locus_tag="U0308_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HEM2317330.1"
                     /translation="MKEGFAVIGLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSI
                     ATHAVIANSTDENALRQLGIRNFEHVIVAIGEDIQSSILTTLILKEMGVKYVTAKATN
                     DKHAKLLDKIGADRVVHPERDMGRRIAHYIVSKNMLDYLELSDEYSLVEISVSDPRFL
                     GKSLVDLDFRNSFGVNIVGIKKDKQMIITPEANDVLHEGDILIVIGS"
BASE COUNT         2900 a         1439 c         1920 g         2458 t
ORIGIN      
        1 tcctcctttt ttacaaaaaa aattaaaaaa ctgtcagccg ctgttgttgt aagatggagg
       61 cgctttctaa aatgtgcaaa atagcgcaaa ccaaactgta tgatgtgaaa ctgagccaaa
      121 acttgtgtac aatgataaat gttattgctt tttttaaaag tgatatgggc cgaatttttg
      181 cctaataaat aattcaatct aaaaaaagaa aggggatttt attttgagca agattaaagt
      241 agaagagcta acgaagattt ttggaaaaaa ggcttctaaa gcatcttctt tactttctca
      301 ggggaaatcg aaaacagaga ttttgaaaga aacaggggcg actattggtg ttaataaagc
      361 atcttttagc gtagaagaag gagaaatttt cgttattatg gggctttcag gtagtgggaa
      421 gtcgactttg gtacgacttt taaaccgtct aattgagcct acgagcggaa aaatttggct
      481 tgacggaaaa gaactatcta gtctaaataa aaaagaactt ttggaagtta gaagaaaaag
      541 catgagtatg gtcttccaaa actttggttt atttccgaat agaacgatta atcgtaacgt
      601 agaatacggc cttgaaattc aaggaatgga caaagaagag cgcgagaaaa atgcagcaga
      661 atcgcttgca cttgttggtt tagctggtta cggcgaacaa tatccttcgc aactttctgg
      721 tgggatgcag caacgtgtag ggcttgcgag agcacttgct aacaatccag atattttact
      781 catggatgaa gctttctctg cacttgaccc acttaacaga aaagatatgc aagatcaatt
      841 actagattta caagataaaa tgaagaaaac aatcatcttt attacccatg atttggatga
      901 ggcactacgt attggtgacc acattatgat tatgcgtgat ggctctgtcg ttcaaacagg
      961 ttccccggaa gaaattctgg cacatccagc aaatgaatac gttgaaaaat tcattgaaga
     1021 tgtagaccgt tccaaagttt atacagcgag caacgtaatg atacgtccag aaatcgttaa
     1081 ttttgaaaaa gatggtcctc gtgttgcgct taaacggatg cgtgaggctg gaacttccag
     1141 tgtattcgtt gttaaacgta atcgtgagct ggttggtatt gtccatgcag cggaagtttc
     1201 taaactagta aaagaaaata ttacttcact agaaacagct ttacatcgtg atgtacctac
     1261 aactggccta gatacgccac ttgcagaaat catggatact atctcgacaa caacgattcc
     1321 gattgctgta accgaagatg gaaaattaaa aggaattatc attcgcggat ccgttctggc
     1381 cgcactttct ggaaacgagg tgaacgttaa tgcctaatat tccaacgatt ccattagcta
     1441 gttggattga caaattagtg gatggcttaa cgcaatttga aggatttttt aatgtaatta
     1501 caaatatcat tggcgggatt gttgatgcat tccaatgggt gttcgattta gttccaccgt
     1561 ggttatttat tattttactt gtatttggca cattttgggt aaaccgtaaa ggcaaaaaat
     1621 ggggtttaat tatctttgaa gttgtcggtt tactgttaat ttggaactta gatttctggc
     1681 gtgatatgac acaaacatta acgctcgttc tgacaagtag tttaattgcg cttgttattg
     1741 gggttccact tggtatttgg atggcgaaaa gcaatattgt tgaaagtatc ttcaaaccgg
     1801 tactcgattt tatgcaaact atgccagcct tcgtttactt aattcctgcc gtagcatttt
     1861 tcggaattgg aatggttcca ggggttgtgg cttctgttat tttcgcaatg cctccaactg
     1921 ttcgtatgac taatctaggt attcgccaag tttcaacaga gcttgtagaa gcagccgatt
     1981 cgttcggttc aacaccttgg caaaaacttt ggaaagtaca gctaccaatg gcgaaatcaa
     2041 ccatgatggc gggtattaac caaagtatca tgttagcact ttccatggtc gtaattgctt
     2101 caatgatcgg tgcaatggga cttggaacac gtgtttactt cgcagtagga cgtaacgacg
     2161 ctggtggcgg atttgtagct gggattgcga ttgttatcgt agcaatcatc ctagaccgtc
     2221 tgacacaagc tttcaataaa aaagcgaaat cagaatgagg aggagagtag attgctaaaa
     2281 aaattaatca ccaccgcagt tttggctatg cttattttca ctttagcagc ctgcggaaca
     2341 acccttgctc cttatgacgc gaaaaaagat ttaggcgaac aaatcaatta tacaatcaca
     2401 ggaattgatg ctggagcagg aattatgctt gcaacacaaa atgcgattaa agattaccat
     2461 ttagatgatg ataattggca attacaaaca agttctaccg cggcgatgac aagtacactt
     2521 caaaaagcga tgaaagataa gcgcccgatt gttgtgactg gttggacccc gcactggatg
     2581 tttacaaaat ttgatttgaa atttttggat gatcccaaaa atgtttatgg taatgcagaa
     2641 aatatccaca ccattgtacg taaaggctta aaagaagata aaccttccgc ttaccaagtg
     2701 ctagataatt tcttctggac tgcggaagat atgtctgaag taatgcttga agttaatgac
     2761 ggtgtagatc cagaagaagc cgctaaaaaa tggattaaaa ataatccaga aaaagtagca
     2821 aaatggacgg atggcgtgga aaaagtagat ggcgatgaaa tcaagttaac ttatgtagct
     2881 tgggattctg aaattgcctc tacaaacgtt gtcgcagaag cattaaaaca agttggctac
     2941 aaaccaacga ttcaagcaat ggaaattcaa ccgatgtggg cgtccgttgc tacggatgca
     3001 gctgatggta tggttgctgc atggcttcca aatacttccg gaatctacta caaagattat
     3061 aaaggaaaat ttgaagattt aggaccaaac ttaaaaggtg ctaaaatcgg tctagcagtt
     3121 ccaaaataca tgacaaacat taattccatt gaagatttaa aaacaagcaa ataaacgttt
     3181 aaaaaggcat gaagaaaatc aagtgatgct tgatagtttc tccgtgcctt tttttctcta
     3241 taagggtaaa atagtagttg attcatgaaa ttgctaggag gaagatgcat gtttaaaaaa
     3301 tttttaaaaa aatcgaaaca agaagtacta ttcgctcacg taactgggca agttattgca
     3361 ttagaagatg ttccagatcc agtttttaat caaaaaatga tgggagaagg cattgcaatc
     3421 aaaccagaaa ctggtaccat tgtcgctcca atagacggga aaattattca attggcagaa
     3481 acaaaacatg cttttggcat tcgtacggat atgggacaag aaattcttgt acatatcggc
     3541 ttagaaaccg tatccttaaa tggagaaggg ttcaacgttt tagtcagtgt aggagataaa
     3601 gtaaaagtag gcgatcctat tgtagaagct gactttgatt ttattgaaaa aaatgctgca
     3661 agtactgttg taccaatggt tataacgaat agctcagaag gtaaatatga ttttgatttc
     3721 catgctgtaa ctaaggcaga agcaggaaaa accgaagtca ttacaactaa tttaaaataa
     3781 tgaaacaaaa tccgtgaaaa ggtaattttc ttttcatgga tttttttgta ttcaagcacg
     3841 tcataaaagg gtagaatgaa ggtaattagt aattaaaagg agcggaataa tatgttagaa
     3901 gtgatagttc aaaatccaag agacgcttac ttagcggaaa aatacggcgc gaatagaatg
     3961 gaagtagttt cagcaataag cgaaggcggt ttgactccaa gttatggtgc tattaaagaa
     4021 atcgtacgtg cctctaagtt accagcgatg atgatgattc gaccacatag tttttctttt
     4081 gtctatgata aggcagccag aatagtcatg gaacgagata ttgagcttgc aaaagaggtt
     4141 ggtgtgcaag ggattgttta tggtggtata acagaaaatg gagaaatcga tcaagctctt
     4201 ctcgaaaaag taatagaatg gaaaggtgat ttagacttaa ctttccaccg ggcgctggaa
     4261 gcaactaaag atatcgaagc gagttaccaa gttttacgta catatgggaa agacatcaac
     4321 caattattaa cttcaggtgg tacagcaaac gcacttgact ctttgccacg cctaaaacgc
     4381 tggattcaag atagcgaagc acagccagat tcattccaaa ttttagttgg aagtggcgtc
     4441 aaaccagaaa atattgcgac cttccaagcg acattaaatc atagcgacta ccatgtagga
     4501 agtgcggcta gagaagccaa tgatttttcc aaagacattt taaaagaaaa aatcgatatt
     4561 ttacagcaac aaataaacaa agattgattc ttcgtagcag gtagccttac aagcttagat
     4621 aagctataat gaaacaagac tattcttaag gaaaaggtgg aaaaaaagtg aataactata
     4681 ttggcaaaag ccaaataatg acagtgaaag aaatcaaaga tacaggatgg ctccttgaaa
     4741 aagacggagt aactgttttt ttatctaaat caaatacaca tgaaacggaa cttgctgttg
     4801 gagcagaagt aaccgtattt atttttgtgg actatgaccg cgaaattgca gcaacaacga
     4861 ttattccaaa aattcaagta gggcattacg gctggggaac ggtgacagaa gtacgtaaac
     4921 atttaggtgt ttttgtcgat atcggcattg aaaaagacgt ggtggtatca ttggatgact
     4981 tacctgcatt accacacttg tggccgaaaa aagaagatcg cgtgatgatt gcgctacgtg
     5041 tggatgaaga aaatcgtgtt tggggcgtcc ttgcagaaga agaacaattc cgcgcaattg
     5101 ccgttcgtgc agaacaagat ctatttaacc ataatgtcga aggaactatt tatcgtttat
     5161 taaaagtcgg ttcatttgtt tttacggatg attttcatat tggatttata catgaaagtg
     5221 aacgaacttc ggaaccaaga atgggcgaac gtgtgaaggc tcgtgttatc gctgtaaaac
     5281 cggacgggtc tcttaattta tcgcttcgtg gtagagcaca tgaagtatta aatgatgacg
     5341 cggaaatgat tttaacttat ttgcgaagtg ttggcggaga aatgccattc ggagataaat
     5401 cagatccaga tgccattcgt gccaaatttg gtattagtaa agcccaattc aagcgtgcaa
     5461 ttggtacgct tttaaaagca agacgaatca ctcaagagaa tggtgtcgtt acaaaaataa
     5521 cggaagaaac atcggactaa agtagtaggg gatgttccaa ctagcgcggt tgtttcaatc
     5581 agtaaatcct cgctataatt aacacagcat gtacaaagta gcaaaaatcg agaaataact
     5641 ttgtcaaaag aggaacgtaa ggaggtgtgt cagcttgaaa aaaatggaaa gctcggttgt
     5701 ttttgtattt ttaattgcga ttattgttgg cgttggtttg gagatgctgt tccagtggga
     5761 gttgcttatt ttatttgcac tcgggatatt ttttatcttt acatcaagga aggcaagcgc
     5821 aacaaagaaa agtgcaagaa actcattatt tattggtatc gtatttatca ttatcgccgt
     5881 gttacttaca accacgttta aagttgggct tgttgttgca ggtatttatg cgatcattca
     5941 ctacattagt aggaagcggg caccccaatt attgatgctc aaaacgagag aacctgacag
     6001 caagattgac cgtacggata agtttattcg taatcagtgg ttcggtaacc agcgtatact
     6061 tgatgtagtg tatgaatggg atgacatcaa tattcaaaca gggattggtg atacgattct
     6121 tgatttaggg aacacggttt taccaactgg cgaaagtgtc attatgattc gtagtgtctc
     6181 aggaaaaatt cgggtacttg ttccatttga tatcggtatt tgcattgaac attccgcaat
     6241 tttcggaaac atccaatatg ataaagaaag cacctctatt caaaataata gcatcaaggt
     6301 ctactcagat aattacgaaa gttccgcacg aaaagtgaaa atcatgactt ctgtaatctt
     6361 cggagattta gaggtgatta gactatgagt ttttcgaaac tgatgatggc tgtttgctca
     6421 gggttactac ttgttgctac agccatcggt acggtcggtt actatttttt tagtgaaggt
     6481 tcttggtata aaattctcat cgaacaaaaa atcttttaca ttccctttgt ggttttcgtt
     6541 ccgcttacag ccatttcgat tggtttaatt ataggcggtt tgctcgggta ttttgttaaa
     6601 caaaaatttg aatcaattga cttctcgatt cggctgctcg gacaaggcga tttggagaaa
     6661 aagattacga gtgaagaaga cgagaacttt ttagaagtgc agcaagtata caagcaaatc
     6721 gaccgcttac gtgataaaat gaaagcacaa acgattttga cacaaaaact tgcaagcgac
     6781 cgtgctgaat caactggcca aacgaaagaa gctattttgt cagaagagag acaccggatt
     6841 gctagagaat tacacgattc agtgagccaa cagctttttg cagcaatgat gcttttatca
     6901 gctttgaatg aacagagtga aaaaagcgca acaccggcga tgcaaaaaca actaaaaatg
     6961 gttgaatcta tcgtaaatga atcccaatca gagatgcggg cgcttttact tcatctgcgt
     7021 ccaacgcaac tcgagggtaa atcattaaaa actggtattg agcaattatt aaaagaatta
     7081 acaaccaaat tgccaatcga agtagaatgg caaatcgagg atattagttt gcaaaaaggc
     7141 attgaggatc atttgttccg tattgttcaa gaattacttt ccaatacatt acgacattct
     7201 aaagctaaat tattagaagt acgcctcgta acgatggata atttagcggt gatgaaagta
     7261 gttgatgacg gcgttgggtt tgatatggat aatgttcgac aaggctctta tggattacaa
     7321 aatatgcgag aacgagttgc tgaattcggc ggcaccatca aaataattag tttcccagga
     7381 agaggaacta gtgtagaaat aaaaatccca cttgttgcga aaaaggacgt ggaaagcgaa
     7441 tgataaaagt attacttgta gatgatcatg aaatggtacg tataggtgtc tcagcttatc
     7501 tttctgtgca agatgacatg gaagtggttg gcgaggcaga gaacggtcgt gaaggggctg
     7561 atatggctct agaactacgc ccagatatta ttttaatgga tttagttatg gatgaaatgg
     7621 acggcatcga agccacaaaa gaaattatgc aaaactggaa agaagcaaaa ataattatcg
     7681 ttacaagttt tattgatgat gaaaaagtat acccggcact tgaagctgga gcgagcagtt
     7741 atatgcttaa aacttcaaca gcgagcgaaa ttgcagatgc gattcgagct acatacggcg
     7801 gagactctgt tcttgaacca gaagtaactg gcaaaatgat gcaacggcta accgctaaac
     7861 cagagaaaaa cttacatgat gatttaacga atcgtgaaaa tgaaatctta cttttaatcg
     7921 cggaaggtaa atccaaccaa gaaatcgcag acgaactttt catcacttta aaaacggtga
     7981 agacgcatgt aagtaatatt ttatcgaaat tagatgtgca agatcgtacg caagcagcaa
     8041 tctatgcatt taaacatgac ttagtagaaa aaaagtagca aggaggtaac gtacaaatga
     8101 aagaaggatt tgcagtcatc ggtcttgggc gattcggcgg aagtatttgt cgttcacttg
     8161 tcgagcaagg aatggaagta cttgcgattg attcggatga agaacgtgtc aacgaatata
     8221 tgtccattgc gacccatgca gttatcgcta attcaacaga tgaaaacgcg ctacgccagc
     8281 ttggtattcg taattttgag catgttatcg ttgcgattgg tgaggatatt cagtcgagta
     8341 tcttaactac acttatttta aaagaaatgg gcgtaaaata cgttaccgca aaagcgacga
     8401 atgataaaca tgccaaattg cttgataaaa tcggagcaga ccgggttgtc catcctgagc
     8461 gagacatggg acgacgtatt gcgcattaca tcgtatcgaa aaacatgcta gattatcttg
     8521 aattatcgga tgaatatagt ctagtcgaaa tctctgtatc tgatccacgt ttccttggaa
     8581 agagcctagt tgatttagat ttccgtaact cttttggtgt caatattgtc ggtattaaaa
     8641 aagataaaca aatgattatt actcctgaag ccaatgatgt tctacatgaa ggagatattc
     8701 taatcgttat cggttcg
//
LOCUS       DASDYK010000107         8392 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.107, whole genome shotgun sequence.
ACCESSION   DASDYK010000107 DASDYK010000000
VERSION     DASDYK010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8392
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.107"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..242
                     /locus_tag="U0308_002371"
     CDS             <1..242
                     /locus_tag="U0308_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="teichoic acid biosynthesis protein"
                     /protein_id="HEM2317331.1"
                     /translation="SRLVSPKLFEASKSFIFASSNIGDTSGNNVDMYEYAANFNDDLT
                     SFKNDRAVKIEVSNNGTVRGNITNMGIKKIYGIVL"
     gene            397..1218
                     /gene="dacA"
                     /locus_tag="U0308_002372"
     CDS             397..1218
                     /gene="dacA"
                     /locus_tag="U0308_002372"
                     /EC_number="2.7.7.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diadenylate cyclase"
                     /protein_id="HEM2317332.1"
                     /translation="MDFSNMSILHYLANIVDILVVWFVIYKVIMLIRGTKAVQLLKGI
                     FIIIAVKLLSGFFGLQTVEWITDQMLTWGFLAIIIIFQPELRRALETLGRGNIFTRYG
                     SRIEREQHHLIESIEKSTQYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQLLI
                     NIFIPNTPLHDGAVIIKGNEIASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSIT
                     IVVSEETGGISLTKGGELFRDVSEEELHKILLKELVTVTAKKPSIFSKWKGGKSE"
     gene            1218..2576
                     /locus_tag="U0308_002373"
     CDS             1218..2576
                     /locus_tag="U0308_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbbR-like domain-containing protein"
                     /protein_id="HEM2317333.1"
                     /translation="MDRILNNKWSIRIVALLLAAILFTSVNANNNNATTFSTTSSSDS
                     EVIENVPVKVYYDKTNLYISGIPETVTVTLSGPRSIVQSAKAQQDFTVYADLKNASIG
                     TQEVKLQVKDVSDRLKVKVNPATVNVNVQEKVTKKFSVDVELSKSVVADGYQAGTPII
                     DPKKVSITGAKDTIEQIAYVKATLESDGKHKSEFTDKATVSVFDSNLNKLDVEVNPQE
                     VEVTVPVEKVGKSVPVKIKQEGTPESDIEISSMTPDKSEVVVVGDDAVLEKIKEIEIP
                     IDVSKIKADTVKEVTVPVPTGAKSVQPTTIEVKIKTVKKSEANNNQTTSDSNNQDTDT
                     TDKNTDDSGDNDTKISKSFSNMQVYMSGLKNTFDAQMITPANGKVSVTITGEKKTVDG
                     IAAKDLSVIANLSKSKAGSYSIPLELNGLPDNVAYVINPRQADFIITDKEASIEVPSK
                     ST"
     gene            2826..4178
                     /locus_tag="U0308_002374"
     CDS             2826..4178
                     /locus_tag="U0308_002374"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEM2317334.1"
                     /translation="MGKYFGTDGVRGVANSELTPELAFRLGRMGGYVLTRHVGEHPRV
                     LVARDTRISGEMLESALIAGLVSVGIEVMRLGVISTPGVAYLTKAQGASASVMISASH
                     NPVDDNGIKFFGSDGFKLSDDQEEEIEQLLDTAEDTLPRPSGEGLGTVSDYFEGKQKY
                     IQYLKQTIENDFNGYHIALDCANGATSGLATHLFADLDADISSMGASPNGLNINDGVG
                     STHPEALATFVLDKKADVGLAFDGDGDRVIAIDEIGQIVDGDKIMFICAKYLREQGLL
                     NNNTIVSTVMSNLGFYKGLKELEIEDVQTAVGDRYVVEAMREGNYNLGGEQSGHIIFL
                     DHNTTGDGLLSGIQLINVMKATGKKLSELAAEMKTFPQKLENIRVSDKNHVTDNPKVS
                     KVIGEVEAEMAGNGRVLVRPSGTEPLVRVMVEAATKEETDEYCERISAVVRSEMALND
                     "
     gene            complement(4213..4674)
                     /locus_tag="U0308_002375"
     CDS             complement(4213..4674)
                     /locus_tag="U0308_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2317335.1"
                     /translation="MNWTIWDKSQPVPLTLLLDADPSEKQIATYFNKSHVLQLMQADT
                     IIGVVCLFPLNKNQLEIMNIVVSSEYRNQGIGKKLLEKAFDYATHKHFSKIIVKTGNS
                     SIDQLAFYQKNGFRMQHIIPNYFTENYPNQTIIENGIACLDQIILLKEIKS"
     gene            4735..5559
                     /locus_tag="U0308_002376"
     CDS             4735..5559
                     /locus_tag="U0308_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317336.1"
                     /translation="MPSKWRGICGSLLIALGITQLYSFISAVIGYFNAEENSFVFVWN
                     YWMLLFFGVGLFIIGFVFMRKESFRLASIIGVICFVLFQGFSVYYYQLRILSKLEYAQ
                     PFEWSGTLLCILGLLVLIALLIGPKFQAKEIQADQAWKTKWRYAAGVFSLLGAVTSVF
                     AAVTIFRQLHSDNIKEGYLFTTVLDGYFACFMAVIFLLVVIFSWRKVSYLLVGILMGA
                     AFILLTNYLSVTNWIDFAKENLSITFGSNEREVFGMQFLMGASAFLSSIFGYIAKK"
     gene            complement(5597..7537)
                     /locus_tag="U0308_002377"
     CDS             complement(5597..7537)
                     /locus_tag="U0308_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317337.1"
                     /translation="MTLFDLAKKNIRHNFVHYFLYFASMIFSIMIYFTFLVLSKDPSV
                     VARIDQSAKLSTAFSSSSVILLIFVAIFILYSNNFFTRKRKKEIGLYSLLGLRKKEIG
                     RMLFYENFIMGLGALIIGIIAGTLLSKLFVTILLNLINLDSIGGFAFSWAAVIQTSIV
                     FIIITLFTSFTGYRIIYRTTLLDLFHSESKREKSPKPSFILALLSILLIGLGYFIAGQ
                     PLDSKGSIWAQLGFSIGALVILASVIIGTALFITFFLPYLLTKLRNNKRIFYKGSNII
                     STSQLAFRISSNAKTLIIISILSATTLSAIGTISSVYYQANTSASTSAPSSFEYEIPK
                     DSETNNKIIKTAESDPDHPVEFKQKSTYYIVKAEGARPDFVEYDINEGFPVISESDYN
                     SLVKKEGTPEKTANLKENEAQMVLTITYDEDAQKEMIGEKFTLNSPDKPNIKIKSVVQ
                     NSPISTIPGLLVLPDSQVAKIAADSSIAAHGVESISVKDAKQAQALDKKMRAVIPKDT
                     NFVSYTKMYQEIITVTGVLLFIGMFIGFVFLAATGSIIYFKQLTEAYNDIGTFDILKK
                     IGLTRRDIRKVLAKQLLVVFLIPLIIGIAHSSFALLGLSHMLALDLTLPVVISTGVYT
                     LMYIVYYFVTLNSYTNIVFGKK"
     gene            complement(7524..8291)
                     /locus_tag="U0308_002378"
     CDS             complement(7524..8291)
                     /locus_tag="U0308_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317338.1"
                     /translation="METVLQAKNVRKIYGSKGNVYTALENISIDIKEGEFTGIMGPSG
                     AGKSTLLNVLSTIDKPTSGQIVISGQELENMNEQQMSTFRRDKLGFIFQDYNLLDTLT
                     IRENIILPLALAKRPVKEMEEKLAIISEKFGITEILDKYPSEISGGQKQRTAASRAII
                     TAPSLIFADEPTGALDSKSATNLLESLRDLNEQDKSTIMMVTHDAFAASFCKRILFIK
                     DGELYTEIYRGTKTRKEFFQKILDVLAKLGGDSDDVI"
BASE COUNT         2740 a         1338 c         1668 g         2646 t
ORIGIN      
        1 catctcgact cgtatcgcca aaactattcg aggcatctaa atcatttatt tttgcttcga
       61 gtaatattgg tgatactagt ggaaataatg tagatatgta cgaatacgct gctaatttta
      121 atgatgactt aacatctttt aagaatgatc gtgcagtcaa aatcgaagtt tcaaataacg
      181 gaacagtacg gggtaatatt acgaatatgg gtattaaaaa aatctatggt attgttttgt
      241 aataaattaa aattaaagag cgctgaatga tttctttaac aaatctttcc aatttttggc
      301 gggacgattg ctttttccac ctgcactctt atgctataat aaagaaagtg aaccatgtga
      361 tcataaatgg ttttcaagag gcacggaggt gaagtgatgg atttttccaa tatgtcgata
      421 ttgcattatc tagcaaatat tgtagatatt cttgtcgtat ggtttgtaat ttataaagtg
      481 atcatgttaa tccgaggtac aaaagcagta caattattaa aaggcatttt tattatcatt
      541 gcagtcaaac tattaagcgg attttttggt ctccaaacag tagaatggat tacggatcag
      601 atgcttactt ggggattcct tgcaattata attatcttcc aaccggaatt acgccgtgct
      661 ttagaaacgc ttggacgagg caatattttt actcgttatg gatcaagaat agagcgtgaa
      721 cagcatcatt taatcgagtc tatcgaaaag tctacccagt atatggcaaa acgtcgaatt
      781 ggggcgctga tttcagtggc gcgcgataca ggcatggacg attatattga aacagggatt
      841 ccgttaaatg caaaaatttc ttctcaatta ttaattaata tttttattcc gaatacaccg
      901 cttcatgatg gagcagttat tattaaagga aacgaaattg catcggcagc aagttacttg
      961 ccactttcag atagcccgtt cttatccaaa gaacttggaa cgcgtcaccg ggctgcactt
     1021 gggattagtg aagtgacaga tagtattacg attgtagttt ctgaagagac tggcggaatt
     1081 tccctaacta aaggtggaga acttttccgt gatgtgtcag aagaagagtt acataaaatt
     1141 cttcttaaag aactagtcac agtaactgca aagaaacctt ctatcttttc taaatggaaa
     1201 ggaggcaaaa gcgaatgatg gatcgaattt taaataacaa atggtcgatt cggattgtag
     1261 ccttactact cgcagccatc ctttttacat cagttaatgc aaataataat aacgccacga
     1321 ctttttcaac gacttcttct agtgattcag aagtcatcga gaatgtcccg gtcaaagtat
     1381 attatgataa aacgaattta tatatttcgg gtattccaga aaccgttaca gtcacgcttt
     1441 caggccctcg tagcatcgtt cagtctgcca aagctcaaca agactttacc gtttatgcag
     1501 atttgaaaaa tgcttccatt gggacccaag aagtaaaact acaagtgaaa gatgtatctg
     1561 accgcctaaa agtaaaagtg aatccagcaa cagtcaacgt caatgtacaa gaaaaagtaa
     1621 cgaaaaaatt ctctgttgac gtagaattga gcaaatctgt cgttgcagat ggttatcaag
     1681 ctggaacgcc catcattgat cctaaaaaag tctctattac tggtgcaaaa gatactatcg
     1741 aacaaattgc ttatgtaaaa gcaacactcg aaagtgatgg caaacataaa tccgaattta
     1801 ccgataaggc taccgtctct gtttttgata gcaatttgaa caagctagat gtcgaagtaa
     1861 atccgcaaga agtggaagtg accgtgccag ttgaaaaagt cggcaagtca gttccagtga
     1921 aaattaagca agaaggcacg ccagaaagtg atattgaaat ttccagcatg acaccagata
     1981 agtcagaagt agttgtagtt ggtgacgatg cggtccttga aaaaatcaaa gaaattgaaa
     2041 ttccaattga tgtttctaaa atcaaagcag ataccgtcaa agaagtgact gtcccggttc
     2101 caactggagc caaatcagtc caaccgacga cgatagaggt gaagattaag accgtaaaaa
     2161 agtctgaagc aaataacaat caaacaactt cagatagtaa taaccaagac acagatacaa
     2221 cggataaaaa caccgatgat tcaggagata acgatacaaa aatttctaag tcattttcta
     2281 atatgcaagt ctacatgagt ggattgaaaa atactttcga tgcacaaatg ataactcctg
     2341 ccaatggaaa agtatctgtg acgataactg gagagaagaa aacagtagac ggaatagcgg
     2401 cgaaagactt gagtgtgatt gccaatttga gtaaaagcaa agcaggaagt tacagtattc
     2461 cactagaatt gaatggctta ccggataatg ttgcctatgt tattaatcct agacaagctg
     2521 atttcattat tacggataaa gaggcatcta ttgaagtacc ttccaaaagc acataacata
     2581 aggagtgtgg ggcgctagtc tcatactcct cctttttggc aaagaacttt ttatacatag
     2641 aatagtggaa aagcaagcaa taccaacgtt ttattgtaga gggatgaaat tttctcttaa
     2701 aaaaggtata ataacaaatg tatggttgag attagcaaag atagaaccag catttgacaa
     2761 agtaatgatg aaatgacaaa caaaaatcat ttagataatg aatgacttag aaggagagta
     2821 atgaaatggg taaatatttt ggtacggatg gagttagagg tgttgcaaac tctgaattaa
     2881 caccagaact tgcattcaga ttaggtagaa tgggtgggta tgttttaacc cgtcacgtag
     2941 gggaacatcc acgtgttctt gtagctcgtg atacacgtat atctggagaa atgcttgaat
     3001 ccgctttaat cgcaggactt gtttctgtag ggattgaagt aatgcgtcta ggagttatct
     3061 ccacaccagg tgtagcttat ttaacaaaag cacaaggcgc ttctgctagt gtaatgatct
     3121 ccgccagcca taatccagtg gatgataacg gtattaaatt ctttggttct gacggcttta
     3181 aattgtcaga tgatcaggaa gaagaaattg aacagcttct tgatacagca gaagatacgc
     3241 tacctcgacc aagtggagaa ggtcttggga cagtgagcga ttattttgaa ggcaaacaaa
     3301 aatatattca atacttgaaa caaacaatcg aaaatgactt taatggatat cacattgcac
     3361 ttgattgtgc gaatggcgca acttcaggtc ttgcaacgca tttatttgca gatttagatg
     3421 cggatattag ttcgatggga gcgtctccaa acggtttaaa tatcaatgat ggcgtcggat
     3481 ctacacatcc agaagcatta gctacctttg ttttagataa aaaagcagat gttggtttag
     3541 cttttgatgg cgatggcgac cgtgttattg caatagacga aattggtcaa attgtcgatg
     3601 gagataaaat tatgtttatc tgcgcgaaat atttacgtga acaaggctta ttaaataaca
     3661 acacaattgt atcaacagtt atgagtaatc taggcttcta taaaggtttg aaagagcttg
     3721 agattgaaga tgtacaaact gcagtgggtg accgttatgt agtagaagct atgcgtgaag
     3781 gtaattataa tcttggcgga gaacaatctg gtcatattat tttcttagat cataatacaa
     3841 ctggtgatgg acttctttca ggaatccaat taatcaacgt gatgaaagca actgggaaaa
     3901 aattatctga gcttgcggct gaaatgaaaa cattcccgca aaaactagaa aacatccgtg
     3961 taagtgataa aaaccatgta acagataatc cgaaagtaag taaagtaatc ggtgaagtag
     4021 aagctgaaat ggctggtaat ggtcgagttc ttgttcgccc atccggtaca gaaccattag
     4081 taagagtgat ggtagaagct gctacgaaag aagaaacaga cgaatattgt gaacgtattt
     4141 cagcggttgt tcgttcagaa atggcactta acgattaaaa caacaaacaa aaaatcctga
     4201 tgataaactt catcaggatt ttatttcttt taatagaatg atttgatcta agcaagcaat
     4261 gccgttttcg ataattgttt gattaggata attttcagta aaataatttg ggataatatg
     4321 ctgcatccga aaaccatttt tttggtaaaa ggcaagttgg tcaatactag aatttccagt
     4381 tttaacgata atttttgaaa agtgtttatg agttgcataa tcaaaagctt tttcgagtaa
     4441 ttttttgcca ataccttggt ttctgtattc tgaagaaaca acaatattca ttatttcgag
     4501 ttggttctta tttagtggaa ataaacaaac aacgccgatg attgtatcag cttgcattaa
     4561 ttgcaacacg tgagatttgt tgaagtatgt cgcaatttgt ttttcactag gatcggcatc
     4621 taacaaaaga gtgagtggga ctggttggct tttgtcccag atggtccagt tcatttttat
     4681 cacctcactc ttagggtaac atggcaaggc ataaatagga aggaagtggg cgaattgcct
     4741 agtaaatgga gaggaatatg cggtagtttg ttaatcgctc ttggtattac gcaactatac
     4801 agttttatta gtgcggttat tggttatttt aatgcagaag aaaatagttt tgtttttgta
     4861 tggaattatt ggatgctatt attttttggt gtaggacttt ttattattgg ttttgttttt
     4921 atgagaaaag aaagttttcg ccttgcaagt attattggcg ttatctgttt cgttttattc
     4981 caagggtttt cggtgtatta ttatcagctc cgaattcttt caaaattaga gtatgcacag
     5041 ccatttgaat ggtcgggaac tttattatgt attttgggac ttttagtatt aatcgcatta
     5101 cttattggac caaaatttca agcaaaagaa atacaagcag atcaagcttg gaaaacgaaa
     5161 tggcgttatg cagcaggtgt tttctcactc cttggagcag tgacatcggt ttttgctgca
     5221 gtaactattt ttagacaatt acattcggat aatattaaag aaggttattt atttacaacg
     5281 gtattagatg gttactttgc atgctttatg gctgttatat ttcttctagt ggtaatcttt
     5341 tcctggcgta aagtttcgta tcttttagtt ggtattttaa tgggtgcagc ctttatttta
     5401 ctgacaaatt atttatctgt gacaaattgg attgattttg ccaaagaaaa tttatctatt
     5461 acatttggta gtaatgaacg agaagtgttt ggtatgcagt tcctcatggg agcttctgct
     5521 tttctatcta gtatctttgg ttatattgcg aaaaaataat ggaatccctc taattaagat
     5581 tagagggatt ctttttttat tttttgccga aaacgatatt tgtgtagcta tttaaggtaa
     5641 caaaatagta aacaatatac attaatgtat aaactccagt agaaataaca actggcaaag
     5701 ttaaatcaag tgctaacata tgtgaaagtc cgagaagtgc aaaactacta tgtgcaatac
     5761 caatgattag cggaattaag aatacaacta gtaactgttt agcaaggact ttacgaatgt
     5821 ctctacgtgt aagaccaatt tttttcaaga tatcaaaagt accaatatcg ttatacgctt
     5881 ctgttagctg tttgaagtag atgatgcttc ctgttgctgc taagaacaca aaaccgatga
     5941 acattccgat aaagagaaga acaccagtga ctgtaataat ctcttggtac atcttcgtat
     6001 aagaaacgaa attcgtatct tttggaataa cagcacgcat cttcttatct aatgcttgtg
     6061 cttgttttgc atctttaact gaaatggatt cgacaccgtg agcagcaatt gaagaatctg
     6121 ctgctatctt agctacttgg ctgtctggaa gtacgagcaa gcctggaata gtacttattg
     6181 gtgagttttg aacgacagat ttaatcttaa tatttggttt atccggcgaa ttaagtgtga
     6241 atttctcacc aatcatttct ttttgagcat cttcgtcata agtaatagtt agtaccattt
     6301 gtgcttcgtt ttctttgaga ttagctgttt tttcaggtgt tccttctttt tttacgagag
     6361 aattataatc agattcggaa ataactggaa aaccctcatt tatatcatat tctacaaagt
     6421 ctggacgagc tccctctgct ttaacgatat agtaagtgct tttttgttta aactctactg
     6481 gatgatcagg gtcactttcc gcagttttaa ttattttatt gtttgtttca ctatctttag
     6541 gtatttcata ttcaaagcta gatggagcgg acgtgcttgc ggacgtattt gcttgataat
     6601 acacactgct tattgtccct atagcagaaa gggttgttgc acttaaaata gaaataataa
     6661 tcaaggtttt cgcattggat gatattctaa aggctaattg cgaggtcgag ataatgttac
     6721 tacctttata gaaaatacgt ttgttatttc taagttttgt aagtaaatac ggtaagaaaa
     6781 aggtaatgaa aagtgcagta ccaatgatta ccgaagctaa aataactaat gccccaatag
     6841 aaaagccaag ttgtgcccaa atagaacctt tagaatcaag tggttgtcca gcgataaaat
     6901 agcctaaacc aattaataaa atcgaaagta aggctaagat gaatgaaggt tttggacttt
     6961 tttcgcgttt tgattctgag tggaacaaat caagtaaagt ggtgcggtaa ataatacggt
     7021 aaccagtaaa tgatgtaaat aacgtgatga taataaagac aatactcgtt tgtattactg
     7081 ctgcccaaga aaaggcaaaa ccaccaatac tatcaagatt aattaagtta agtaaaatgg
     7141 ttacaaaaag cttggaaagt aatgtaccgg caataatacc gatgattaat gcgccaagtc
     7201 ccataataaa attttcataa aacaacatgc gaccaatttc ttttttacga aggccgagta
     7261 aagagtaaag tccaatttct ttttttcttt ttcgggtaaa gaaattattg gaataaagga
     7321 taaaaatcgc tacaaaaata agtagaatga ctgaggagct tgaaaatgct gtcgataatt
     7381 tagccgattg gtcaattcta gctacaacag atggatcttt cgaaagaaca aggaatgtaa
     7441 aataaatcat aatgctgaaa atcatcgatg caaaatataa aaagtaatgg acaaaattat
     7501 gtcgaatatt tttcttagct aaatcaaata acgtcatctg agtcgccccc cagttttgca
     7561 aggacgtcta gaattttttg gaagaactcc ttacgtgttt tagttccacg atagatttct
     7621 gtgtataatt ctccgtcttt aataaataaa attcgtttgc aaaaacttgc tgcaaacgca
     7681 tcatgtgtta ccatcatgat tgttgattta tcttgttcat ttaagtcacg taagctttca
     7741 agtaagttgg ttgctgattt agaatcaagc gcaccggttg gctcatcggc aaaaattaaa
     7801 cttggtgcag taataattgc tcttgaagct gcagtacgtt gcttttgacc acctgaaatc
     7861 tcgcttggat atttatcaag gatttctgta atgccgaatt tttcactgat aattgctaat
     7921 ttttcttcca tttcttttac tgggcgtttc gctagtgcga ggggaaggat aatattttca
     7981 cggatagtta atgtgtctag taagttgtaa tcttggaata taaaacctag tttgtcacgt
     8041 cggaaagtgg acatttgttg ttcattcatg ttttcgagtt cttgtccgga aatcacaatc
     8101 tgaccagaag tcggtttatc aatagtagat aagacattta gtaacgtgga tttaccagcc
     8161 ccagatggtc ccataattcc agtaaattca ccttctttaa tatcaatact gatattttct
     8221 agtgcagtgt agacatttcc tttgctaccg tatatttttc tcacattttt tgcttgtaaa
     8281 actgtctcca ttattttctc tccttaaaaa ctagattcgg ttagtatatg tatcattcta
     8341 tcgtgtatat aggactcgtt ccatcgtatc aaatgacatt tacggtagat at
//
LOCUS       DASDYK010000108         8310 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.108, whole genome shotgun sequence.
ACCESSION   DASDYK010000108 DASDYK010000000
VERSION     DASDYK010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8310
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.108"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..910)
                     /locus_tag="U0308_002379"
     CDS             complement(<1..910)
                     /locus_tag="U0308_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317339.1"
                     /translation="MSAGLLWKEWRQNAWVFIFILIAFIGSEATTATNAVSMFNDNYN
                     YYQSEEFQKNNTADQQMTGNEIKNDLSLTPYDFEGNLGLFFYVFLFLGLKLTVFEKNK
                     QMDYFTFGLPYSKKQIFWHKMLIPLLLIFVLVPIIIFCRFWYIYQQIPGLYLPSVSDS
                     LMYISSFLLLYLFSYTLAVAVGNLVGEIITAGIIAIGSIVSFLYMFPGALTNLIIGFK
                     AFFTGKTIVDIDGGAVMLYNAIPTPILQGTTALSEFVILIILSIGMLTISWYAMKTAS
                     LENDGRFLMNNKFRVPILIIGSLYVTI"
     gene            complement(907..1785)
                     /locus_tag="U0308_002380"
     CDS             complement(907..1785)
                     /locus_tag="U0308_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003739595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317340.1"
                     /translation="MKVDSLSKKIDGELLLDKITFEVKPGEIIGIVGRNGVGKTTLFR
                     TIMGFYIPDEGDVYLDEALSKNPQLKQKLFMLQDSLNCWDGYKIPTIKKFYQKTYPLF
                     DGAKFDNLLNQVNLATDVKFQNYSKGMKGLFGLVLALSIGAEFILLDEPMEGLDIIAQ
                     KKIMGILLEEVEKRKLGIIISSHRLADLDPIADYIHILQDNHIEESYHLESLREQAVK
                     IQIAFENKKIPPFLLENGKVINKYGRVYTILFRDMNTELYAAIKKEKPIFMDELAVTL
                     EDLFIYHLEELGGEKS"
     gene            complement(1775..2170)
                     /locus_tag="U0308_002381"
     CDS             complement(1775..2170)
                     /locus_tag="U0308_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2317341.1"
                     /translation="MFTINTKSQLPIYEQIVQKIKEQVVKGILQEGEKILSIREFASR
                     IGVNPNTVSKAYQELERQEVIVTVKGKGTFIANQQDKVSSPKKLAETKIKLKETILDL
                     VYLGINVEEIHRLSDEYSQDIIGGDMVEG"
     gene            complement(2262..2744)
                     /locus_tag="U0308_002382"
     CDS             complement(2262..2744)
                     /locus_tag="U0308_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEM2317342.1"
                     /translation="MTDLYYDTLHFSDTELYFAATKTGLFYVGTKAEKIQSAKRSPEK
                     MNMYKEELVAYLNGELTYFTVPMDLSATPLQLEVFHALEAIPYGETRTYTEIAAQINR
                     PKAVRAVGTAIGRNPLLFIIPCHRVIGKNGKLTGYSGGIGMKESLLKLEKAKINQFSF
                     "
     gene            2890..3450
                     /locus_tag="U0308_002383"
     CDS             2890..3450
                     /locus_tag="U0308_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylphosphotriester-DNA--protein-cysteine
                     methyltransferase family protein"
                     /protein_id="HEM2317343.1"
                     /translation="MSDYYLTKKRWQAISTNDKTADGTFFYGVTSTKIFCYPSCKSRL
                     PKKENIVIFHSAEEAFSHGYRACKRCKSGGTALPDTEWITNIEMYIKENFAKPLTLQI
                     IADDCHGSPYHLHRTFKRITMITPITYLENVRISYAKMQLTSTNQSIETIGKMAGFPN
                     PSHFSTTFKRHTGLSPNQFRKTIIKN"
     gene            3472..4341
                     /locus_tag="U0308_002384"
     CDS             3472..4341
                     /locus_tag="U0308_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEM2317344.1"
                     /translation="MTHVTLPILEDWEGLSLTTILQEKFHLGKKARHEIRMSQNVLLN
                     NKPLDDWNTPLFVGASLSLPVFLHDKIPVYEYDLEIIYEDDFLLVVNKPVDMKTHPND
                     SYETDTCANAVQYYLEKTGQDANALAVHRLDQTTSGLVLFAKNKLAIAGLSWQMENRA
                     IHRTYLAAVDGTWGLVMQTINKPIGEDRHHGSRRQISPYGQPAVTHVKVLENDNEKNT
                     SLVECQIETGRTHQIRVHLSGIGHPIIGDTLYGGSPRANRIMLHAEKLHLNHPFKGKE
                     MNFSAPAGDDWVF"
     gene            complement(4354..4746)
                     /locus_tag="U0308_002385"
     CDS             complement(4354..4746)
                     /locus_tag="U0308_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2317345.1"
                     /translation="MLHHVEIYVADLEESRLFWSGLLEELSYELYQTWNEGFSYKFAD
                     TYLVFVQTEEPFVAEGYHRKRVGLNHLAFHGGTKERVDDFRAKLKAKGTKLLYEERYP
                     FAGGENHYAVFFEDPNGIKVEICTEVTT"
     gene            complement(4748..5404)
                     /locus_tag="U0308_002386"
     CDS             complement(4748..5404)
                     /locus_tag="U0308_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HEM2317346.1"
                     /translation="MTDIQMVFRANRSLIDAPPMEAYMKNQFTFLGIRAGERKKLVAE
                     YLKENGAPQDLLGFTIALFAEEEREFQYVAIDLLSRYGKKQPSEAIKVYEQLIVTKSW
                     WDTVDGLAGTVVSNHFKLYPELIPTYNEAWINGDNIWLARTAILFQLKYKEETDVDLL
                     FSNCEKWLDSKEFFIQKAIGWALRQYAKVDSGAVRQFVNSHSLAPLSRREALKHIGEA
                     "
     gene            complement(5401..6285)
                     /locus_tag="U0308_002387"
     CDS             complement(5401..6285)
                     /locus_tag="U0308_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2317347.1"
                     /translation="MTKTLQDRMILPGNETIPYIGLGVFQVTEQEFIAGAVEKAIEVG
                     YRLFDTAAVYNNEAIVGQAIASSAVSREELFISSKVWNGDLGFDETLFAFERTLRNLK
                     LDYLDLYLIHWPVAGKYRDSWRAMERLHDEKLIKSIGVANFKQHHLSDLLVAANEKPV
                     LNQVETHPLLPQNDLRKYLAEQNIAHAAWSPLAKGILMQNPVITEIAKKHQASVDQVI
                     LQWHLNRNTIIFPKSITSSRIEENSRLSYFQLDAIDMEKIDRLETGKRVGPDPDDLEY
                     FLSSIERERAYLSGENAE"
     gene            6672..7292
                     /locus_tag="U0308_002388"
     CDS             6672..7292
                     /locus_tag="U0308_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 domain-containing protein"
                     /protein_id="HEM2317348.1"
                     /translation="MAFKNKKDRFASLLHDIAVNLHEGANFFATYNINSVEDLHTFSN
                     KIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQ
                     ITHYDEYMTKFIQAIQASTVEIEKAVDLVFDKKLKDVRKLAIQIKDYESQCDDVYRES
                     LIQLFQNEKDPIKLIRLREVYEKLEDIADSCQSVANTLESIVMKNA"
     gene            7306..8304
                     /locus_tag="U0308_002389"
     CDS             7306..8304
                     /locus_tag="U0308_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEM2317349.1"
                     /translation="MEGMFLITLVIVLAALAFDLINGFHDTANAIATSVSTKALKPRH
                     AIILAAVMNFVGAISFTGVAKTITKDIVNPFDLDHGELVILAALLSAIAWNLITWYFG
                     IPSSSSHALIGSIAGAAIASAGFAAIEYSGFTKIIVGLLVSPVLAFVVGYTIYSLFKV
                     FLKNLNLATTNRRFRMIQVGTAALQSYTHGTNDAQKSMGIITMALIASGFQTTDDVQL
                     WVQVSCAIAMAIGTSIGGWKIIKTVGGKIMKIKPVNGVAADLSSVIIIFGATFIHLPV
                     STTHVISSSILGVGTAHRVKGVKWDTAQRMIITWVITLPISATIAALIFYVLRFIL"
BASE COUNT         2600 a         1692 c         1344 g         2674 t
ORIGIN      
        1 aaatagtcac ataaagagaa ccaatgataa gtatagggac ccggaattta ttattcatta
       61 aaaatctacc atcgttttcc aaagaagctg ttttcatcgc ataccagcta atggttaaca
      121 ttcctattga taagataatt aatatgacaa attcacttaa cgctgtagtt ccttgtaaaa
      181 ttggcgtagg tattgcgtta tacagcataa ctgctccacc atcaatatcc actattgttt
      241 ttccagtaaa gaaagcttta aaaccaatga ttaaattagt caatgcgcct ggaaacatgt
      301 ataaaaagct aacaatagat ccaatcgcta taattccggc tgtaattatc tctccaacca
      361 aattcccgac tgccactgct aacgtgtaag aaaataaata caataacaaa aaggaactaa
      421 tatacatcaa agaatcgctc acactgggta aatacaaccc cggtatttgc tggtaaatat
      481 accaaaacct acagaaaatg atgattggta ctagtacgaa aattaaaagt aatggaataa
      541 gcatcttatg ccaaaaaatt tgcttcttgg agtatggcaa tccaaaagta aaataatcca
      601 tttgcttatt tttctcaaaa acagttaact ttaaccctaa aaacagaaac acatagaaga
      661 aaagccctaa attcccttca aaatcataag gagttaaact taaatcattt tttatttcat
      721 tacccgtcat ttgttgatct gctgtattat ttttttgaaa ttcttcagac tgataatagt
      781 tatagttgtc attaaacata ctaaccgcgt tcgttgcagt cgtagcttca gaacctataa
      841 aagcgattaa aataaatata aatacccacg cattctgacg ccattctttc caaagaagcc
      901 ctgcactcat gatttctcgc ctcctagttc ttctagatga taaataaaca agtcttctaa
      961 tgtgactgcg agttcatcca tgaaaattgg tttttctttt tttattgctg cgtataattc
     1021 tgtgttcata tctcggaata aaatggtgta aacacggcca tacttattaa ttactttgcc
     1081 attttccagt aaaaaaggtg gaattttttt attttcaaaa gcgatctgaa ttttaacagc
     1141 ttgttcccga agtgattcaa gatggtaaga ctcttcaata tgattatctt gtaaaatatg
     1201 aatatagtca gcaatcggat ctaaatcagc taaacgatgg gaagaaataa taatgcctaa
     1261 tttccgcttc tccacttctt ctaataatat gcccataatt ttcttttgag caattatatc
     1321 gagaccttcc attggttcat cgagcaaaat aaattcagct ccgatagata gggcaagaac
     1381 gagcccaaaa agacctttca ttccttttga ataattttga aattttacat ctgtagctag
     1441 gttaacttga ttgagtaagt tatcaaattt agctccgtcg aataatggat aagttttttg
     1501 atagaatttt tttatcgtcg gaatcttata accatcccaa caatttaaac tatcttgaag
     1561 catgaataat ttttgcttta attgagggtt tttgcttaat gcctcatcta agtacacatc
     1621 tccctcatca ggaatataaa aacccataat agttcgaaaa agagttgttt tacctacgcc
     1681 atttcgtccg actataccaa taatttctcc tggctttact tcaaatgtta ttttatccaa
     1741 taagagttcc ccgtcaattt ttttgctaag tgaatcaacc ttcaaccatg tcacctccaa
     1801 tgatgtcttg actatattcg tctgataatc tatgtatttc ttcaacgtta attccaaggt
     1861 aaactaaatc gagaatcgtt tcttttaatt taatttttgt ttctgctagt ttttttggtg
     1921 aacttacttt atcttgttgg ttcgctatga aggtcccttt tccttttacc gtgacaatta
     1981 cttcttgtcg ttctaattct tggtacgctt tactcacagt gtttgggttc actccgattc
     2041 tacttgcaaa ttcacgtata gataatatct tttctccttc ttgaagtatc cctttgacaa
     2101 cttgttcttt aattttttgg acgatctgtt cataaatcgg tagttgactt tttgtgttaa
     2161 tcgtaaacat ctctccccct gctttcatga attctactat agagaactaa ttgtactagt
     2221 tactatagta cagtagataa aaaaataaat caattctctt tttaaaaaga aaattgattt
     2281 atttttgctt tttcaagttt taagagtgat tctttcatcc ctatcccccc gctataacct
     2341 gttaatttgc catttttacc aattactctg tggcatggaa taatgaaaag tagtgggttt
     2401 cttccgattg ccgttccaac tgcgcgcacg gctttggggc gatttatctg tgctgcaatt
     2461 tctgtatacg ttctagtttc tccataagga atagcttcca atgcgtgaaa tacttcaagt
     2521 tggagaggag tagcggacaa atccattggt acagtaaaat acgtaagttc tccgttcaaa
     2581 taagcgacca attcttcttt atacatgttc attttttctg ggcttcgctt ggctgattga
     2641 atcttttctg cctttgttcc aacgtaaaat agcccagttt tcgtcgctgc gaaataaagc
     2701 tctgtgtctg aaaaatgaag cgtatcataa tataaatctg tcatttcctt cacctctttc
     2761 taatgttaat tatacgctaa attgaataac atttctaacc agtttcacta taagagcaag
     2821 attagaaaag ttttcctcgc aatttacctt cataacgttt atgattaata agaagttgag
     2881 gtgataacat tgtcggatta ttacttaacc aaaaaaagat ggcaagcaat ttcaacgaat
     2941 gataagactg ctgatggcac atttttctat ggtgttacat ctacgaagat tttttgctat
     3001 ccttcttgta aatcacgatt accaaaaaaa gaaaacatcg ttattttcca tagtgcggag
     3061 gaagcttttt cgcatggcta ccgggcttgt aaacgatgta aatctggtgg tactgcgcta
     3121 cctgatacgg agtggataac aaatatcgaa atgtatatta aagaaaattt tgccaaaccg
     3181 ctcactttac aaatcattgc ggatgattgc cacggaagtc cgtaccactt acaccgaaca
     3241 tttaagcgaa tcacgatgat tacacccatt acttaccttg agaacgtccg gattagttac
     3301 gcaaaaatgc agctaacctc gaccaaccaa tccattgaaa ctattggaaa aatggctggc
     3361 tttccaaacc cctctcattt ttctactaca tttaaaagac ataccggttt gtcaccaaac
     3421 caatttcgaa aaacaataat aaaaaattaa attagaacgg atgatttgac tatgacacat
     3481 gtaacattac ctattttaga agactgggaa ggcctttcac taactactat tttgcaagaa
     3541 aaatttcatc tcggtaaaaa agcgcgacat gaaattcgca tgtctcaaaa tgttttgcta
     3601 aacaataagc cactggatga ttggaatacg ccacttttcg ttggagcgag tctttcttta
     3661 ccagttttct tacatgacaa aatccctgtc tatgagtacg acttagaaat tatttatgaa
     3721 gatgattttt tactagtagt gaataaacca gttgatatga aaactcaccc aaatgatagt
     3781 tatgaaacag atacttgcgc gaatgccgtg caatattact tagaaaaaac aggccaagat
     3841 gcgaacgccc tagcagttca ccgtcttgat caaactactt ccggtttagt actgtttgct
     3901 aaaaacaaat tagctatcgc cggcttatct tggcaaatgg aaaatagagc gattcaccgg
     3961 acttatctcg ctgcagttga tggtacttgg ggactcgtga tgcaaacaat caacaaacca
     4021 attggcgaag atcgtcacca cggttccaga cgccaaatca gcccatacgg tcaaccagca
     4081 gtaacgcatg ttaaagtatt agaaaatgat aacgaaaaaa acacctctct tgtagaatgc
     4141 caaatcgaaa ctggtcggac gcaccaaatt cgcgttcatt taagcggaat tggccatcca
     4201 attattggcg atacgcttta tggtggttcc cctcgtgcta atcgcatcat gctacatgcc
     4261 gaaaaattac atttaaatca tcctttcaaa ggtaaagaaa tgaatttttc tgctccagct
     4321 ggagatgatt gggtatttta aaaagccaca acattacgtt gtgacttctg tacaaatttc
     4381 tacttttatt ccatttggat cttcaaaaaa tacagcataa tgattttcac cgccagcaaa
     4441 aggatatctt tcttcatata gaagtttggt tccttttgct tttaatttgg ctcgaaaatc
     4501 atccacccgt tcttttgtgc caccatgaaa tgccaaatga ttgagcccaa ctcgtttgcg
     4561 atgataacct tccgcgacaa acggttcctc tgtttgcaca aatactaaat acgtatcggc
     4621 gaatttataa ctaaagcctt cattccaagt ctggtataac tcataagaaa gttcttctaa
     4681 cagccctgac caaaacaagc gactttcttc taaatcagct acatatattt ccacatgatg
     4741 taacatatca cgcctccccg atgtgtttaa gtgcttctct tcggcttaac ggcgcaagcg
     4801 agtgactatt tacaaactga cgaactgccc cgctatcgac ttttgcatat tgtctgagcg
     4861 cccatccaat cgctttttga ataaagaatt ctttggaatc cagccatttt tcgcaattgg
     4921 aaaaaagtaa atctacatcg gtttcttctt tgtacttcaa ttgaaataaa attgccgttc
     4981 gagcgagcca aatgttatct ccatttatcc acgcttcatt ataggtagga atcaactcag
     5041 gatatagttt aaaatgatta cttactaccg ttcccgctag gccatccaca gtatcccacc
     5101 aagatttcgt tacaattaat tgctcatata cttttatcgc ctcactaggc tgttttttac
     5161 cgtaacggct taataaatca atcgccacat actgaaattc acgctcttct tcagcaaata
     5221 aggctatcgt aaatccaagt aaatcttgcg gcgccccatt ttctttcaaa tattccgcta
     5281 ccaatttttt tcgttcaccg gctctaattc ccaaaaaagt aaattgattt ttcatgtaag
     5341 cttccattgg cggagcatct attaaagaac gattcgcgcg gaataccatt tgaatatctg
     5401 tcattccgca ttctcacctg ataaataagc gcgttcccgt tcaatactac ttaaaaagta
     5461 ttctaaatca tctggatctg gtccaacacg tttccccgtt tctaagcgat caattttttc
     5521 catatcaatg gcatctagtt ggaaatagga caaacgtgaa ttctcctcaa tccgactaga
     5581 agtaattgac ttcggaaaaa taatcgtatt gcggttcaaa tgccattgta aaatcacttg
     5641 atctacagat gcttgatgtt ttttcgcaat ttctgtaatc accggatttt gcattaatat
     5701 tcctttagcc agcggtgacc aggcagcgtg cgcgatattc tgttccgcca aatacttacg
     5761 aaggtcattt tgcggtaaca gtggatgcgt ttccacttga tttaaaactg gtttttcatt
     5821 tgcagcaacc aataagtcac ttaaatgatg ttgcttgaaa ttcgcaactc caatagattt
     5881 aatcaatttt tcgtcatgaa gccgctccat cgctcgccat gaatcacggt atttcccagc
     5941 tacaggccaa tgaattaaat acaaatccaa ataatccaac ttcaaattcc gaagtgttcg
     6001 ctcaaaagca aataacgttt catcaaagcc aaggtctccg ttccacactt tcgaactaat
     6061 aaataattct tctcgtgaga ctgcgctact agcaattgct tgcccaacaa tcgcttcatt
     6121 attataaact gccgctgtat caaacaaacg ataacctact tcaattgcct tttccacagc
     6181 accagcgata aattcttgtt ctgttacttg aaatacacca agtccaatat aaggaattgt
     6241 ctcattcccc ggtagtatca ttctgtcttg taatgttttt gtcaaaacga aaccctcctc
     6301 acgaaaactg ttttgtgaac tttttctctt aaatgaatta tacactattt tcgcaaattt
     6361 atattttaaa accagtatac cgaaatgcgc cttactctcc taataaaaag ccacaaaaat
     6421 tctacttttt ttattcattt aatgaaatac ctaaaaacag ccattggaaa cgctgtcaga
     6481 acgtttattt gcagagccgt caaaaaaaag tttcctattt attcccatcc tatgttagta
     6541 ttaatttgtg gtaaagatct atcaagtttt ttatttgttt tcgttaactt atcgttaaga
     6601 aaaaagctcc cttttcaaag taaaagcgag ctgattatta atgaccaaaa atgatcgggg
     6661 gaattaagaa aatggctttt aaaaataaaa aagaccgttt tgcttcgttg ttgcatgaca
     6721 ttgcagtaaa tttacatgaa ggtgcaaatt tctttgcaac ttacaacatt aattcggtgg
     6781 aggatttaca tactttctcg aataaaatca aagaatatga aacagctgga gactccatgg
     6841 ttcacaaaat gattatggaa ttaaacgacg ctttcattac accaatcgaa cgtgaggaca
     6901 tgttagaact tactaaccgc ttagacgacg taatggatgc acttgatgaa acagctttct
     6961 cactagaaat ctgccaaatc actcattatg atgaatacat gactaaattt atccaagcta
     7021 ttcaagcaag cactgttgaa attgaaaaag cagttgacct tgtttttgat aaaaaactaa
     7081 aagacgttcg taaacttgcg attcaaatta aagattacga atctcaatgt gatgatgttt
     7141 accgcgaatc actaatccaa cttttccaaa acgaaaaaga tccaattaaa ctaattcgcc
     7201 taagagaagt ttatgaaaaa ttagaagaca ttgctgatag ttgtcaaagc gttgcgaata
     7261 cgcttgaatc aattgtcatg aaaaatgcgt aaggggccta gatagatgga aggaatgttt
     7321 ctcatcaccc tcgtcatcgt acttgccgcg ctagcatttg acctgatcaa tgggtttcat
     7381 gatacagcta acgcaattgc gactagtgtc tctacaaaag ccttaaaacc acgacatgcg
     7441 attattcttg ctgccgtaat gaactttgtg ggtgctattt cattcacagg ggttgctaaa
     7501 acaattacaa aagacattgt taacccattc gacttagatc acggcgaact tgttatttta
     7561 gcagcattac tttcagctat tgcttggaac ttaatcactt ggtatttcgg aattcctagt
     7621 agttcctccc atgccttgat tggatccatc gccggtgcag ccattgcatc agccggattt
     7681 gcagcaattg aatacagcgg atttactaaa atcattgttg gtttattagt atctcctgta
     7741 cttgctttcg tagtcggtta cacgatatat tcactcttca aggttttcct gaagaactta
     7801 aacttagcca cgaccaatcg gcgcttccgg atgattcaag tcggaactgc tgcgctacaa
     7861 tcttacacac acggaactaa tgatgcacaa aaatcaatgg ggattatcac aatggcatta
     7921 attgctagtg gtttccaaac aaccgatgat gtgcaattat gggttcaagt atcctgtgcg
     7981 attgccatgg cgattggtac gagtattggt ggttggaaaa tcatcaaaac tgttggcggt
     8041 aaaatcatga aaatcaaacc agttaatggt gtagcggctg atttaagttc cgttatcatt
     8101 attttcggtg ctactttcat tcatttacca gttagtacaa cacacgtaat cagctcttct
     8161 atccttggtg ttggaacagc tcaccgtgtc aaaggtgtca aatgggatac tgcccaacgt
     8221 atgattatta cttgggttat cacacttcct atttcagcaa caattgcagc acttatcttc
     8281 tatgtactaa gatttattct ttaatattat
//
LOCUS       DASDYK010000109         8094 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.109, whole genome shotgun sequence.
ACCESSION   DASDYK010000109 DASDYK010000000
VERSION     DASDYK010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8094
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.109"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            144..929
                     /locus_tag="U0308_002390"
     CDS             144..929
                     /locus_tag="U0308_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate deacetylase"
                     /protein_id="HEM2317350.1"
                     /translation="MPKLIIDADDFGLSKAINHGIIESYKTGITTSTLLMPNLETAEH
                     AIALAKDHPDLFIGQHTNFLLGKPCTDPAEIPSLVDENGEFHRSKYYRANPELKFQYE
                     DVRTETIAQMERFKALTGHYPEHIDCHSIGDETVDQAFFDIAREFGIHTTLKYSGDKK
                     WPDQEGYLPITKLLESGALPYTNGGVSIENFLNDDFGLLKLAPNEIAEMHFDVGFLDQ
                     FVLDNSSYTLMRCRELATICDVRVRDWLLENGFELITFGDLQR"
     regulatory      960..1065
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            1152..1826
                     /gene="tenA"
                     /locus_tag="U0308_002391"
     CDS             1152..1826
                     /gene="tenA"
                     /locus_tag="U0308_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HEM2317351.1"
                     /translation="MFVHGFQEEVGDLWQETLQHPFVQSLADGTLEKEAFYYYLLQDD
                     YYLSHFEKVIEKSVEQAGTAEIAAEMREVQRRLQQSELLMREQFYPRVGLTERDFSVR
                     KPAPTAYHYASHLYRMADFGSFGVTIAALLPCYALYADMGKMYEGARSSEPFYQELLD
                     SYVDENYQKVVLQQKRLVEQAASMADARELALMKQAFQISVEMEWAFFDMAYKKQNWR
                     GSVNYV"
     gene            1819..2628
                     /gene="thiM"
                     /locus_tag="U0308_002392"
     CDS             1819..2628
                     /gene="thiM"
                     /locus_tag="U0308_002392"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HEM2317352.1"
                     /translation="MFDFMTLEKVWEKGPLVHNITNIVVANDSANGLLAIGASPIMAS
                     AKEEMDELAKMADVLVINIGTLDGELVTAMKIAGRAANVAGTPVVLDPVGVGATSYRR
                     KVVQELLAEIQFTAIRGNAGELAAIAGEAWEAKGVDAGVGSADVLSIAEKVANEWSTV
                     VIISGEVDVISDGTRFAKVANGSALLPRITGSGCLLSAVCGSFMAVQDDAFRASVEAC
                     ASYAVASEYAEIELERKLPGSFRPQFLDALASWSVEKTRAKAKIQESGEHK"
     gene            2625..3428
                     /gene="thiD"
                     /locus_tag="U0308_002393"
     CDS             2625..3428
                     /gene="thiD"
                     /locus_tag="U0308_002393"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEM2317353.1"
                     /translation="MIFKQVLTIAGSDSGGGAGIQADIKTFQERKTFGMSVITAITAQ
                     NTLGVKAVHKIPVEMIREQCDAIAEDFQVSAVKTGMLADAEIIREVARNIRLHNFPNI
                     VIDPVMIAKGGTALLENEATQVLKDELLPLGTIITPNIPEAEEILGEKITTKAEIEQA
                     AKKIFDLGVKAVVIKGGHSEMSEAADFYYDGETTKWLTSERFDTPHTHGTGCTFSACI
                     AAELAKGNSLLDSVMVAKEFITSAIKYPLGIGHGHGPTNHFAYRLEDGK"
     gene            3425..4069
                     /locus_tag="U0308_002394"
     CDS             3425..4069
                     /locus_tag="U0308_002394"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEM2317354.1"
                     /translation="MRAELAVYFIAGTQDIVRGTLPGVLEEALKAGITCFQYREKGAG
                     SLQTASERKEMALECQQLCAKYQVPFIINDDVALALEIGADGIHVGQNDEEIRQVIAS
                     CAGKMKIGLSVHSVSEAEEAERLGAVDYIGVGPIFPTISKADAEPVSGTTILKEIRRA
                     GIKLPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKNPGYPS"
     gene            complement(4096..5511)
                     /locus_tag="U0308_002395"
     CDS             complement(4096..5511)
                     /locus_tag="U0308_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2317355.1"
                     /translation="MHTNTGFPANFLWGGAAAANQFEGAYNVDGKGLSVQDVTPKGGF
                     GHITDGPTPDNLKLEGIDFYHRYKDDVKLFAEMGFKVFRTSIAWSRIFPNGDETEPNE
                     AGLQFYDDLFDELLAHNIEPLITLSHYETPLHLSKTYDGWVNRKMIDFYENYVRTVFN
                     RYKGKVKYWLTFNEINSILHAPFMSGGISTSPDKLSQKDLYQAVHHELVASALATKIG
                     HEIMPEAQIGCMVLAMPTYPLTSNPDDIIAVMEAERKNYFFSDVHVRGTYPGYMKRYF
                     RENNIELDVTEEDLEILKNTVDFISFSYYMSTTETADESKRKAGAGNILGGVQNPYLE
                     ASEWGWQIDPQGLRVVLNEFWDRYQKPLFIVENGLGAIDQLEKDENGNYTVNDDYRIN
                     YLSAHLSQVKEAIKDGVDLMGYTSWGCIDLVSASTAEMKKRYGFIYVDRNNDGTGTLN
                     RYKKKSFGWYKNVIATNGEDL"
     gene            complement(5725..6981)
                     /gene="vip"
                     /locus_tag="U0308_002396"
     CDS             complement(5725..6981)
                     /gene="vip"
                     /locus_tag="U0308_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell invasion LPXTG protein Vip"
                     /protein_id="HEM2317356.1"
                     /translation="MNKYFKNLATVLFTVSLLTTSITALPAMASAYEETHNASTIYIS
                     PLDAPHVGDTKITGKTTALSSFAIAIYTPEGRLTGTFFGTTNAAGTYAVDLSDFTYYD
                     PLGYEASGNVILEKGAMVRSMTETNSDLIKTVTINYNYIQTAINELFLNNDPTGTILA
                     ATDQNAINAVQEQINTVTSSEKETFQEQLNNAQQQLDARIAQEQAAIQAVNQLFLEDN
                     PANSIKAETTQDLIDQAQTLVDVLPASELKDTLQANIVKAQTELDERSKPVTPPKNDP
                     ETDNPEEPVTPVDPATPTPDEPSTPTDPATPTPDEPSTPTDPATPEKPEITTPENPES
                     TVVESDSSENEPEKSADSKIVNNPIQITSQATKTATKQATKQAKSSVTKTTTLPIPKT
                     GDTETTSSILFGTLMLASLALFRRKK"
     gene            7310..7969
                     /locus_tag="U0308_002397"
     CDS             7310..7969
                     /locus_tag="U0308_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAP family protein"
                     /protein_id="HEM2317357.1"
                     /translation="MGSAFSAILSPAVGILISPFPIVGLILILLSNKARINSIFYTVG
                     WIVGNIAIFFIGLFLMSSAVSSSGDQSTLVKVVLIVLGALLILLGAHDFTKRPKNGEQ
                     AATPKWFEKMSNIKPGGAMMFAFVLSAVNPKNMLLSLTAGVSVGALNLSGGQETTATI
                     IFGIIACCSIYIPTIAFLLAGSKLNNALDSTRKWLIQNNSVIMAVLFLFIGLSVISKA
                     F"
BASE COUNT         2203 a         1423 c         2011 g         2457 t
ORIGIN      
        1 tgaaagattg gaactatgga ttaattgtta aagagatttg gaaagattag cttatagtta
       61 tgctagttga taagaggcaa tcttttgtta agaaattaat aaatttgtag tctgtttttt
      121 taattataat aaggaggttc cccatgccaa aactaatcat cgacgcagac gatttcggtc
      181 tatccaaagc catcaaccac ggcatcatcg aaagctacaa aaccggcatc acaacatcca
      241 ctttactcat gccaaaccta gaaactgccg agcacgcaat cgctctcgca aaagaccacc
      301 cagacctatt catcgggcaa cacacaaatt tcttactcgg aaaaccatgc acggacccgg
      361 cggaaatccc gtcacttgtc gacgaaaacg gggaattcca tcgttccaaa tattaccggg
      421 ctaaccctga actgaaattc caatacgaag atgtgcgcac ggaaaccatc gctcaaatgg
      481 aacgattcaa agcgctaact ggtcactacc cagaacacat tgactgccac tcaatcggtg
      541 atgaaacggt tgaccaagct ttctttgata ttgcgcgtga gttcgggatt cacaccactt
      601 taaaatacag cggtgataaa aaatggccag atcaggaagg ttatttacca attactaaac
      661 tattggaatc gggcgcactc ccatacacaa acggcggtgt ctcgattgag aacttcctta
      721 acgatgattt cggattatta aaattggcgc caaacgaaat cgctgagatg cattttgatg
      781 tcggtttttt ggatcaattt gtgctggata attcttctta tacgttgatg cggtgccgcg
      841 agcttgcgac gatttgtgat gtgcgggtgc gggattggct tcttgaaaat gggtttgagc
      901 ttattacatt tggggattta cagcggtaaa actctatgtt atgatgaacg caacttaata
      961 agaaaaacta ggggggccga ttctggctga gataggaagg taatgctttc tgaccctttg
     1021 aacctgtttg ttagtgcaag cgtagggaag tgaatgtgaa agtgaccgga aaatttatcg
     1081 cggctgctgt ttctttgctt atgctaaggg acagtgggcg ctttttttat tgttcaaaag
     1141 gaggagtttg agtgtttgtt cacggttttc aagaagaagt aggggattta tggcaagaaa
     1201 cgttgcagca tccatttgtg cagagtttgg cggatgggac gcttgagaag gaggcgtttt
     1261 actattattt gctccaggat gattattact tgtcgcattt tgagaaggtg attgagaaaa
     1321 gtgtagagca agctggaact gcggaaattg ctgcggaaat gagggaagta caaaggcggc
     1381 ttcagcaatc agagttgttg atgcgcgaac agttttatcc gcgggttggg ctaacggagc
     1441 gcgatttttc cgtgcgaaaa ccggcaccaa ctgcttatca ttatgcttct cacctttacc
     1501 ggatggcaga ttttggcagt tttggggtaa cgattgcggc gcttttgccg tgttatgcgc
     1561 tttatgctga tatggggaaa atgtacgaag gggcgcggag ttcggagcca ttttatcaag
     1621 agttgttgga tagttatgtg gatgaaaatt atcaaaaagt ggtgttgcag cagaagcggt
     1681 tggtggaaca ggcggcgagt atggcggatg cgcgggagct tgccctcatg aagcaggctt
     1741 ttcaaattag tgtggaaatg gaatgggcat tttttgatat ggcttataaa aaacaaaatt
     1801 ggcgtgggag tgtgaattat gtttgatttt atgacgttgg aaaaggtgtg ggaaaaaggg
     1861 ccgttggtac ataatattac gaatatcgtg gttgcgaatg actcggcgaa cgggttgctt
     1921 gcgattggtg cgtcaccgat tatggcttct gcgaaagagg aaatggatga acttgcgaaa
     1981 atggcggatg tgctcgtgat taatattggg acgctagacg gggagcttgt tacagcgatg
     2041 aaaattgctg gacgtgcggc aaatgttgct ggaacgccgg ttgtgcttga cccggtcggt
     2101 gttggtgcga cttcataccg tcgtaaagtg gtgcaagaat tattggctga aatccagttt
     2161 acggcgattc gtggaaatgc gggagagctt gcggcgattg ctggtgaagc ttgggaagcg
     2221 aaaggcgtgg atgcgggtgt tggttcggcg gatgtgctga gcattgctga aaaagtggcg
     2281 aatgaatgga gcacggttgt tattattagc ggcgaagtag atgtgatttc agacggaacg
     2341 cgttttgcaa aagtggctaa tggtagcgca ctgcttccaa gaattactgg ttctggttgt
     2401 ttgctcagtg cagtttgcgg tagttttatg gccgttcagg atgatgcttt tcgagctagt
     2461 gtcgaagcat gcgcgagtta tgcggtggct tctgagtacg cggaaatcga attagaaaga
     2521 aaacttccag gttcatttcg accacaattt ttagatgctc ttgctagttg gtcggtcgaa
     2581 aaaacgcgtg ccaaagctaa aatccaagaa agtggtgaac acaaatgatt ttcaaacaag
     2641 tattaacgat agctggttca gattctggcg gcggcgcggg gatacaagcg gatatcaaga
     2701 catttcaaga gcgtaaaacc tttggcatgt ccgtcatcac ggcaatcacg gcacaaaaca
     2761 cgctaggtgt aaaagcagtg cataaaatcc cggtagaaat gatccgcgaa cagtgcgacg
     2821 cgattgcaga ggattttcaa gtgagcgccg tgaaaactgg aatgctagca gatgcagaaa
     2881 ttatccggga agtggcgcgg aatatccgtt tgcacaactt cccaaatatc gtcattgatc
     2941 ctgtgatgat tgcaaaaggt ggaactgctt tgcttgaaaa cgaggcgacc caagtgttga
     3001 aagacgagct tttgccactt ggtacgatca ttacgccgaa tattccagaa gcggaagaaa
     3061 ttcttggtga aaaaatcaca accaaggcgg aaattgaaca agccgctaag aaaatttttg
     3121 atttaggtgt aaaagcggtt gttattaaag gtgggcatag cgaaatgagt gaggcggctg
     3181 atttttacta tgatggcgaa acgacaaaat ggctgacgag cgagcgcttt gatacgccgc
     3241 atacgcacgg gactggttgc actttttcgg catgtattgc agctgaactt gcgaaaggga
     3301 attcgctttt ggatagtgtc atggttgcga aagaatttat cacaagtgcg attaaatatc
     3361 cgcttggaat tggtcacggt catggtccaa ccaaccattt tgcctaccga ttggaggatg
     3421 ggaaatgaga gctgaactag ctgtatattt tatcgctgga acgcaagata ttgttcgtgg
     3481 aacgttgcca ggtgtgttag aagaagcact gaaagccgga attacttgtt tccaatatcg
     3541 cgaaaaagga gcaggctcac tccaaactgc ttccgaaaga aaagaaatgg cgctagaatg
     3601 ccaacaatta tgcgcaaaat atcaagtgcc attcattatt aacgatgatg tcgccctagc
     3661 cctcgaaatc ggcgcggacg gcatccatgt cgggcaaaac gacgaggaaa ttcgccaagt
     3721 tatcgcgagt tgcgctggaa aaatgaaaat cggactttcg gttcattcgg ttagtgaagc
     3781 ggaggaagca gaacgacttg gagcggtgga ttatatcggc gttgggccca tttttcccac
     3841 gatttcaaaa gcggatgcag agccagtgag tggaacgaca attttgaaag aaattcgccg
     3901 ggctggaatt aagctaccaa ttgtcgggat tggcggaatt aatgaaacaa attcagctga
     3961 ggttctcaca gcaggtgcgg acggggtatc ggttatttca gcgataactc ggtcggatga
     4021 ttgctactcc gttatcaagc aattaaaaaa cccaggttac ccttcttaaa aagggcaaac
     4081 ctgggtttct catttttata aatcttcacc attggtagca ataacgttct tgtaccaacc
     4141 aaaacttttc ttcttataac ggtttagcgt acctgtgccg tcgttgttgc gatcgacata
     4201 gataaagccg taacgttttt tcatttcagc agtggaggca cttacaaggt caatacagcc
     4261 ccatgaagtg taacccatca agtcaacgcc atctttaatc gcttctttca cttgcgataa
     4321 atgagcgctc aaataattaa tacggtagtc atcatttact gtgtagttgc cgttttcgtc
     4381 tttttctagt tgatcgatag cgccaagacc gttttctacg atgaaaagtg gtttttggta
     4441 tctatcccag aattcgttta ggacaacgcg caagccttga gggtcgattt gccagcccca
     4501 ttcggatgct tctaggtaag ggttttgtac gccgcctagg atgtttcctg cgccagcttt
     4561 gcgttttgac tcgtcagctg tttcggttgt gctcatgtaa tagctgaagg aaatgaaatc
     4621 tactgtgttt ttaaggattt ctaggtcttc ttctgttacg tctaattcaa tattattttc
     4681 tctgaaatag cgtttcatgt agcccggata agttccgcgg acatgaacat cggagaagaa
     4741 gtagtttttg cgctctgctt ccataacagc gataatatca tctgggttgg aagttagcgg
     4801 ataagttggc attgctagga ccatgcagcc gatttgggct tcgggcatga tttcgtgacc
     4861 aatttttgta gccagcgcgc tcgccacaag ttcgtggtgg acagcttgat ataagtcttt
     4921 ttgagataat ttatctgggc ttgtagaaat accgccgctc atgaatggtg cgtgtaaaat
     4981 ggagttgatt tcattgaaag tgagccaata ttttactttg cctttatagc gattaaatac
     5041 ggtgcggaca tagttttcat agaagtcgat catttttcta tttacccagc cgtcgtaagt
     5101 tttcgataaa tgaagtggtg tttcatagtg agataaagta atcagtggtt cgatattatg
     5161 tgctagaagt tcatcgaata aatcatcgta aaattgtaat cctgcttcgt ttggctcagt
     5221 ttcgtcacca tttgggaaga tacgggacca agcgatggaa gtacggaaaa ccttgaagcc
     5281 catttcggca aaaagtttca cgtcatcttt gtagcgatga tagaagtcaa ttccttctaa
     5341 ttttaagtta tctggtgttg gaccgtcagt aatgtgacca aatccgcctt ttggagtaac
     5401 atcttgaacg gaaagtcctt ttccatcgac gttgtaagcg ccttcgaatt ggtttgcagc
     5461 agcagctcca ccccataaaa agttggctgg aaatcctgta tttgtatgca tgttaaaaac
     5521 tccttttcta cattttaaag tatctatgaa aaaaaccaaa tacttttcta aatacatgca
     5581 aaaaaacacg gtacttagaa aaatatttgg ttatgcccgg ctttcgtcgg taacattccg
     5641 atttatagtt aaaatatagc aaaaataagg aagatagtca acgaaaacaa ataacaccga
     5701 ctctattttg agccggtgtt ttgactattt tttacgtcta aaaagggcaa gggaagcgag
     5761 cataagtgta ccgaataaaa tgctagatgt ggtttcagtg tcccctgttt taggaattgg
     5821 caaagtagtt gtttttgtta cgctggattt tgcttgtttt gttgcttgtt ttgttgctgt
     5881 ttttgttgct tgactagtaa tttgaatcgg gttgtttact atttttgaat cggcggattt
     5941 ttctggttca ttttcgctag aatcagattc tactaccgtt gattctggat tttctggagt
     6001 ggtgatttct ggtttttcag gtgttgctgg atctgttggt gtagatggtt cgtcaggtgt
     6061 tggggttgct ggatctgttg gtgtagatgg ttcgtcaggt gttggagttg ctggatctac
     6121 tggtgtgact ggctcttctg ggttatcagt ttctggatcg ttttttggtg gtgttacagg
     6181 tttggaacgt tcgtctagtt ctgtttgagc ttttacaatg ttggcctgaa gcgtatcttt
     6241 taactcggaa gcaggaagaa catcgacaag cgtttgagct tggtcaatca agtcttgcgt
     6301 agtttcagct ttaatcgagt ttgctggatt atcctctagg aaaagttggt tgacagcttg
     6361 tatggctgcc tgttcttgtg ctatgcgcgc atccagttgt tgttgagcat tattaagttg
     6421 ttcttggaaa gtttcttttt ctgaactagt tacagtatta atttgttcct gcacagcgtt
     6481 aatagcgttt tgatctgttg cagctaaaat agttcctgtt ggatcattat ttagaaacag
     6541 ctcattaatg gctgtttgga tatagttgta gttgatggtt actgttttga ttaaatcgct
     6601 attagtttct gtcattgaac gaaccatggc ccctttctct aaaattacat tgccactagc
     6661 ttcgtagcca agaggatcat aataagtgaa atcggataaa tcaacagcgt aggtaccagc
     6721 tgcattggta gtgccaaaga atgttccagt gagcctgcct tctggggtat aaattgctat
     6781 ggcaaaagat gataatgctg tggtttttcc agtgattttc gtgtcaccaa catggggcgc
     6841 atctaaaggg ctaatataaa tagttgaggc attatgtgtt tcttcatatg cggatgccat
     6901 cgcaggtaag gcagtaatag aagtagttaa aagggagaca gtaaataata cagttgctaa
     6961 gttcttaaaa tatttattca ttaagtggtc tttcctccaa tagaaataat cttgtgagct
     7021 tagcatacta ttatcaggat gctaaaaata gtagtgaaat gagttgtatt tccggtttat
     7081 gaagtgaaat tatgtctaat tcgccacatt tggctaataa ctacattgta tcccttagaa
     7141 taaagtcttt ttttagtcaa gcgctccgat aaaagcattt ttgttcttct gagaaaaaga
     7201 tataccgaca attgtttgtt agccgggatt agagggaact aggtaaaagg aacggtctaa
     7261 tgaagatgat tttttcatta gtaaagatat atacagagga ggagtcagcg tgggatcagc
     7321 gttttcagct attttgtcac cggcagtggg gattttgatt agcccatttc caattgtagg
     7381 acttattttg attttactta gcaacaaggc tcggattaac agtatttttt atacggtagg
     7441 ttggattgtt gggaatatag ctattttctt tattgggtta ttcttaatga gttcagcggt
     7501 tagttcgtcc ggagatcagt caaccttggt caaagtggta cttattgtgc tgggggcttt
     7561 acttatactt ctaggcgcac atgactttac aaaacgtcct aaaaacgggg agcaggctgc
     7621 aacaccaaaa tggtttgaaa aaatgagcaa tattaaaccg ggaggcgcga tgatgtttgc
     7681 gtttgtgctt tcagcagtga atccaaaaaa tatgttgctt tcacttacag cgggagtgag
     7741 cgttggggcg ctgaatttat ctggtgggca agaaacaacg gcaacgatta tttttggcat
     7801 tatcgcttgt tgttcgattt atattcctac cattgctttt ttattagctg ggagtaaact
     7861 taacaacgca ttggatagca cgcgtaaatg gcttatccaa aacaattcag tgattatggc
     7921 ggttcttttc ttatttattg gtttgagtgt tattagtaag gcgttttaaa aataaagctg
     7981 ttttttcctg gaacatagga gaaagacagc tttatttttt taataaatta aaagaaatct
     8041 gttctatttt tgataatact ttctaaataa ttagttgttc gaaaatgaca ctag
//
LOCUS       DASDYK010000110         7961 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.110, whole genome shotgun sequence.
ACCESSION   DASDYK010000110 DASDYK010000000
VERSION     DASDYK010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7961)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7961)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7961
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.110"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..404
                     /locus_tag="U0308_002398"
     CDS             <1..404
                     /locus_tag="U0308_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317358.1"
                     /translation="AQEDAAEDEQAEEPAQDDVSTPSKITSDSIELFNESIDRLISDS
                     SGVLIKVVPFENEYDMLIAYVSQDLKYQDEATKQKNVDYLGSEIQQRALGTLFGGDNN
                     LRPMVEFRYKDETKMAGSSAFDKTNMKLKGK"
     gene            426..1166
                     /locus_tag="U0308_002399"
     CDS             426..1166
                     /locus_tag="U0308_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317359.1"
                     /translation="MKKGMVLLTGFLLAFSIFLVGCGNEKNDIQVTNTNDKSNFKEKE
                     EAQMKLTETEITPNDKGDFSIMGVVDEGASVYIESEEAEVNSSGMFVASSNYTGSEEI
                     QYTVTAKEAGKTDNVQIVTILPPTLKEYSVGDTQEIGGIKVTLTSVEKTNERNQFDDT
                     KPKNVVKISYKVENNSGSEYFVDSDIDVYDSKGTMGERYPLDNTTGKIPNGKNMNADF
                     HAGVNESGNIEIIFNLFSDANLTFHAKI"
     gene            1232..2434
                     /locus_tag="U0308_002400"
     CDS             1232..2434
                     /locus_tag="U0308_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM2317360.1"
                     /translation="MVKKVKGRRYEGSIEQRSKNSWRMRVTVGYDYKGTPIRADRTTR
                     TKNERERERELRNFITELEQNGYTAPARMTFKAFVENEYMPKHAQNNLEVKTWTEYYK
                     SIVARAYPAFGGVQMDKITTLHIVNLVAKLQKPGARLDVKPTDSDEKKNKPLSPRSIR
                     NIYFAINSVFETAVEWKVIPINPAEGVRLPKTTKRPPTIYTPAEIELLNAALVKEPLR
                     LQVMIYIALISGCREAELAALEVKHVNLIEDELTFEQTLVAKAGEGLLLKESTKNDVA
                     GIVSIPAWLTNLIETYISNEVLDLKTEGKWTNHKFLFANMEGKPIRPDSIYQRWKRFL
                     ERHNLPVIRFHDLRHTSATLLLNKGRDIKIIQERLRHKSSVTTSNIYAHVLKDTHKDA
                     ASDFENPF"
     gene            complement(2541..2613)
                     /locus_tag="U0308_002401"
     tRNA            complement(2541..2613)
                     /locus_tag="U0308_002401"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2578..2580),aa:Lys,seq:ctt)
     gene            complement(2701..3657)
                     /locus_tag="U0308_002402"
     CDS             complement(2701..3657)
                     /locus_tag="U0308_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HEM2317361.1"
                     /translation="MTASVFVAGKLLPETMEALSEWDVKAFSGEENITEAELIKNVTE
                     VDAIICPLSSPISAKVLESAKNLKIVANIGAGFDNIDVKKAQELGIAVTNTPDVSTEA
                     TAELTLGLILDVARRISEGDRLCRETPEQFKGWAPTFFLGTELSGKTLGIIGLGRIGQ
                     AVAKRAAAFGMKIIYSGHHPKEAAKEWNAEFVSQEELLKRSDVVTIHAAYSPSLKYLL
                     NETTLKTMKSSAFLINAARGPVVEEAALIKALEAGVIAGAALDVFEFEPKIGEDLAKL
                     DNVVLTPHIGNATVETRTAMGKIAIANVEAVLAGKAPLHSVY"
     gene            3788..4426
                     /locus_tag="U0308_002403"
     CDS             3788..4426
                     /locus_tag="U0308_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEM2317362.1"
                     /translation="MKKITAPRIPDGDLTVYPNDTYFIEDIGEVSEQIFRKTTLTGEI
                     FEHFHLETIIFDGCVFDSVSLVSANLTDVVFKNCDLSNLDLMGAIIHRVRFENCKLIG
                     VNFSDATLRNCVFVDCYADYVAFRYANLKWVAFEAGAYTNSDFSGAQLVDTYLERLDL
                     NKAQFLNCALNGVDLSSCIFESITAMPQDLKGVSIDFSHAPALMPLFGIRVK"
     gene            complement(4448..5500)
                     /locus_tag="U0308_002404"
     CDS             complement(4448..5500)
                     /locus_tag="U0308_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional transcriptional activator/DNA
                     repair protein Ada"
                     /protein_id="HEM2317363.1"
                     /translation="MITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAK
                     KPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDK
                     DFDELSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQIESGYESG
                     NGFRDAFSKTMGEVPHKSNDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLET
                     EIKKLRVRLNAAITPEKTIIIQQIEAELAQYFNGALIDFKTPIRYIGSDFQQSVWNEL
                     RRIPIGETISYKSLAEKLGRPTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGG
                     LARKEWLIKHEKMVPR"
     gene            complement(5497..6270)
                     /locus_tag="U0308_002405"
     CDS             complement(5497..6270)
                     /locus_tag="U0308_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEM2317364.1"
                     /translation="MTKNFKKLKSLHELPTPLILYNCWDVASARAIQQGGAPVIATSS
                     YAIAESLGAVDGEHLTFDEMFLVISRIAKNVSLPLTVDIETGYARNLEELAQNVERLL
                     AIGVCGVNLEDQLIGVTNPGLCSTEEQCDKIETIKETAAKMSTEIFINARTDVFFQGR
                     DETVDLLEEAIDRAKAYKEAGADAIFIPGLLLPKLIRAFVEKSPLPVNVMRMDGMLSN
                     EDLQKIGVKRISYGPFSFFQANLAIQLEVERIFEGGKAL"
     gene            complement(6697..7020)
                     /locus_tag="U0308_002406"
                     /pseudo
     CDS             complement(6697..7020)
                     /locus_tag="U0308_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009927999.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(7136..7489)
                     /locus_tag="U0308_002407"
     CDS             complement(7136..7489)
                     /locus_tag="U0308_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317365.1"
                     /translation="MEKIYRGNGFAVIERNGEFQITFPKGVTGEPVFFPITKALMEKA
                     FKSSDDAYEVMIYAETGLWPEKNTEEEENERIRTFVRKFPELLIKVPDNQDLFTEEEL
                     KELLPLGKKKLSEEE"
BASE COUNT         2405 a         1616 c         1421 g         2519 t
ORIGIN      
        1 ccgctcaaga agacgctgcc gaggacgagc aagcagaaga acctgctcaa gatgatgtat
       61 ctacaccctc taaaattaca tcagatagta tagagttatt taatgagtca attgatcgct
      121 tgatttctga ttcgagcggg gtactaataa aagtggttcc atttgaaaat gaatatgata
      181 tgttaattgc gtacgtatct caagatttaa aatatcaaga tgaagcaact aaacaaaaaa
      241 atgttgatta tttaggaagc gaaatacagc aacgtgctct aggtacgctc tttggtggag
      301 ataacaatct aagaccaatg gttgagttca gatataaaga tgagacaaag atggctggaa
      361 gtagtgcttt tgataaaact aatatgaagc tcaaaggaaa ataaaatata aagggagcag
      421 ataagatgaa aaaagggatg gttttattaa cggggttttt attagctttt agtatttttt
      481 tagtaggttg tggaaatgaa aaaaatgata tacaagttac aaataccaat gataaaagta
      541 atttcaaaga aaaagaagaa gctcaaatga agttaacaga aacagaaatt acaccaaatg
      601 ataaaggcga ctttagcata atgggcgttg tcgatgaagg tgcatctgtt tatattgagt
      661 cagaagaagc agaagttaat tcatcgggga tgttcgttgc ttctagcaac tacaccggct
      721 cggaagaaat tcaatatact gttacagcta aagaagctgg aaaaactgat aatgtacaaa
      781 ttgtaactat acttccaccc actctgaaag aatacagcgt tggtgataca caagaaatcg
      841 gcgggataaa agtaacttta actagtgttg agaaaacgaa cgaaagaaat caatttgatg
      901 ataccaagcc taagaatgta gttaaaataa gttataaagt tgaaaataat tctggctctg
      961 agtactttgt cgattctgac attgatgtat acgattctaa aggtacaatg ggcgaaagat
     1021 acccattgga taacacaacc gggaaaatac caaacggaaa aaatatgaac gcagacttcc
     1081 atgcgggagt taatgaaagt ggaaatattg aaataatctt caacttattt tctgatgcaa
     1141 atttaacgtt ccatgcaaaa atttaaaaga gagcctctgg gcttttcttt ttaccgaaaa
     1201 aagaacgtat gtgcgaaagg aggacttatt tatggtaaaa aaagtaaaag gtaggcgtta
     1261 tgagggttct attgaacaac gtagcaaaaa ttcatggcgt atgcgcgtga ctgtaggcta
     1321 tgactacaaa ggtacgccga ttcgggctga cagaacgacg cgaacaaaaa atgagaggga
     1381 gcgagaaaga gagttaagaa atttcatcac agaattagag caaaatggat atacagctcc
     1441 tgcaagaatg acatttaaag catttgttga gaatgagtat atgccaaaac atgcacaaaa
     1501 taacctagaa gttaaaacct ggacagaata ctacaaatct atagtagcaa gagcttaccc
     1561 agcctttggc ggcgttcaaa tggataaaat aactacactt catatagtta atttagtcgc
     1621 aaaattacaa aagcccggcg caagattaga tgttaaacct acagattcag acgaaaagaa
     1681 aaataagcca ctttcgccac gatctatcag aaatatttat tttgcgataa attcagtatt
     1741 tgaaactgcg gttgagtgga aagtaatccc aattaacccc gcagagggtg taaggcttcc
     1801 aaaaacaact aaaagaccgc ctactattta tactcctgct gaaattgaat tgttaaatgc
     1861 agctctagtg aaagagccac ttagattgca agtaatgatt tatatagcgc tgatttcagg
     1921 ttgtagagaa gctgaattag cagcattaga agtaaaacac gtgaacttaa tagaagatga
     1981 gctaacattc gaacaaacgc tagttgcaaa agcaggagaa ggtttacttc ttaaagaatc
     2041 aactaagaat gatgtagctg ggatagtttc tatacccgct tggttaacta atttaataga
     2101 aacatatata agcaatgaag ttttagacct aaaaactgaa gggaaatgga ccaatcacaa
     2161 atttttattc gccaacatgg aaggcaaacc gattaggcct gattcgattt atcagcgttg
     2221 gaaacgattt ttagaaagac acaacttgcc ggtgattcgt tttcatgatt tgcgtcacac
     2281 atctgctaca cttttattga acaaaggtag agatataaaa attatccaag agcggcttag
     2341 acataaatct agtgtgacca cttcaaacat ttatgcacat gttttgaaag atacgcacaa
     2401 agatgcagct agcgattttg agaacccttt ttaagctttc tgccccacct ctgccccact
     2461 taataaaaaa aggcaatttt aaactaaaat ttcacaaaca aaaaaccgct taaacgcttt
     2521 gtttaggcgg tttttatata tgggttgtga gggtttcgaa cccccgaccc gctgattaag
     2581 agtcagctgc tctaccaact gagctaacaa cccgttgtcg tattccgaca aaaaatatta
     2641 taccataatt cagcgataaa acacagccgc agccactcgc tgcggctata tttttcggta
     2701 ttaataaaca gaatgtagtg gtgcttttcc tgctaagaca gcttcaacat ttgcaatggc
     2761 tattttgccc attgctgtgc gtgtttccac agttgcgttt ccgatatggg gtgttaatac
     2821 gacattatcc agtttagcca aatcctcgcc aatcttaggc tcgaactcaa acacatccag
     2881 cgcagcgccg gcgataacgc ctgcttctaa tgccttaatc agtgcagctt cctctacaac
     2941 aggaccgcga gcagcattga tcaaaaaggc acttgatttc atcgttttca gtgttgtttc
     3001 gttcaacaga tacttcaagc tgggactgta tgccgcatgg attgttacaa catcgctgcg
     3061 cttcaataat tcttcctgac tcacaaactc tgcattccac tctttcgctg cttctttcgg
     3121 atggtgccca gaataaataa ttttcattcc aaaagcagcc gcacgttttg caacagcttg
     3181 tccgattctt cctaatccaa taattccgag cgttttgcca cttaattcag tacctaaaaa
     3241 gaacgttggt gcccagcctt tgaattgctc gggtgtttcg cggcataatc ggtcgccttc
     3301 tgaaattctc cgtgctacgt ccaaaatcaa tccaagcgtt agttccgccg ttgcttccgt
     3361 tgacacatct ggcgtattgg tcactgcaat gcccaattct tgcgcttttt ttacatcgat
     3421 attgtcaaaa ccggcaccaa tattcgccac gattttaaga ttttttgccg attccaatac
     3481 ttttgccgaa attggggaag aaagcgggca aataatcgca tccacttccg ttacattttt
     3541 tattaactct gcttctgtaa tattttcctc acctgaaaaa gctttaacgt cccattcact
     3601 aagagcttcc atcgtttctg gtagtaattt tcctgccaca aatacgctcg ctgtcatcac
     3661 gttcactcct caactgccat ttttattcta cattcattgt aatccgtttt ttatgaaagg
     3721 taaacgattt tccgctcctt ttcctagcaa aatacggtat aatgaaagcg gaagtgaggt
     3781 cgatataatg aaaaaaatta ctgcgccgcg gattcctgat ggggatttga cggtttatcc
     3841 gaatgataca tattttattg aagatattgg agaagttagt gagcaaatct ttagaaaaac
     3901 aacgctaact ggggaaattt tcgagcattt tcatttagaa acgattattt ttgatggttg
     3961 tgtttttgat tcggtttctc ttgtaagtgc gaatttgact gatgttgtat ttaaaaattg
     4021 cgatttatcg aatttagatt taatgggcgc aattattcac cgagttcgtt ttgaaaattg
     4081 taaattaatt ggcgtgaatt ttagtgatgc tacgcttaga aattgcgttt tcgttgattg
     4141 ttatgcggat tatgttgcct ttcgttatgc taacttgaaa tgggtggcgt ttgaggcggg
     4201 cgcgtatacg aatagtgatt ttagcggggc tcaactggtc gatacctatt tggaacggct
     4261 tgatttgaat aaagcgcagt ttttaaattg cgcgctaaat ggtgttgatc ttagctcatg
     4321 tatttttgag tctatcactg caatgccgca agatttgaag ggcgtgagca ttgatttttc
     4381 gcatgctcct gctttgatgc cgttgtttgg gatacgggtt aaataattga aaaaagatgg
     4441 ttccgcgtta ccttggaacc atcttttcat gtttaattag ccattctttg cgcgcaagac
     4501 cgccaccgta gcctcctaat gctccgttag tattgattac acgatggcac gggacgatga
     4561 gggataattg gttagcccca tttgctcttg ccacagctcg acttgctgtt ggccgcccta
     4621 gtttttctgc caaacttttg tacgaaattg tttcgcctat cggaattcgt cgcagttcat
     4681 tccagacact ctgttgaaaa tctgacccga tatagcgaat cggtgtttta aaatcaatca
     4741 atgctccatt aaaatattgc gctaattcgg cttctatttg ttgaattatt attgtttttt
     4801 caggtgtaat agccgcgttt aagcgcactc gtaatttttt aatttctgtt tccaatcctt
     4861 ttcgatcaac aaattccaga agcaatagac tatcatcatc agaaattgcg agcattgatc
     4921 caagtttagt ttcaagccaa gcggaataca aaatggtgat atcgtttgat ttatgaggaa
     4981 cctcccccat cgtttttgaa aaagcatctc ggaacccatt tccagactca taaccacttt
     5041 caatttgtgc attaatgatc gaatttccac cccgaatatg cttaaaagca agaccgagac
     5101 gccgcgaacg cgcatactca ataaaagtca tcccaaactg cttcttaaac tggcgccgcg
     5161 ctgtatttgc gctaatggat aattcatcaa aatctttatc cgtccatttt ttctctggat
     5221 ttttctcaat tgcatcaaca agcaacttca cagctggcga caatttcgtc ggattggaga
     5281 gtggttcaca acgcttgcaa ggccggtaag atgcaagtag cgcctccttg gctgtactga
     5341 aaaactcaca attctctttt aaaggtttct tcgccggaca cgttgggcga caaagtattc
     5401 ccgtcgtttt cactccaaca aaaaatacgc cttcataatt cgaatttttc tccactaaca
     5461 tatcataata tttatcaata tcccgctgat tcgttatcac aaggctttcc ctccttcgaa
     5521 aatccgctca acttccagct gaatcgctaa attagcctga aaaaaactaa acggcccata
     5581 actaattctt ttcacaccga ttttttgtaa gtcctcgttt gagagcatcc catccatcct
     5641 catgacgttg accggaagcg gtgatttctc cacaaatgcg cgaattaatt ttggtaatag
     5701 cagacccgga ataaaaatag catctgcccc agcctccttg tatgcctttg ccctgtcaat
     5761 cgcttcttcc aacaagtcta ccgtctcatc ccgcccttgg aaaaagacat ctgtacgcgc
     5821 attgataaaa atttccgtgc tcattttcgc cgccgtttct ttgattgtct cgattttatc
     5881 acattgctcc tcagtactgc ataaccccgg atttgtaacg ccaataagct gatcttccaa
     5941 gttcacacca caaacaccaa tcgctagcaa ccgctccaca ttctgagcca gttcctctaa
     6001 atttctagca tacccagtct ctatatccac cgttagcggc aaactcacat tcttggcaat
     6061 gcgcgaaata actaaaaaca tttcgtcaaa agttaaatgc tccccatcca cagcgccgag
     6121 tgactctgca attgcataac tgcttgtcgc tattactggt gctccgcctt gttggattgc
     6181 tctggcagaa gcgacgtccc agcagttgta gaggattagt ggggtgggta gttcgtgtag
     6241 ggattttagt tttttaaagt tttttgtcat tggtttcaac tccatttgtt aggatggagt
     6301 tagtatagca ggtggggaga ttggaggtac caggaaaatt aacatggatg ttttttggta
     6361 gatgtatgta gaactgtaaa ctcttgcata cgctaagtag cctaaaattc tcttcctcat
     6421 cttaagctac ttgttcccgt atatagttaa tttcattctc tctttgaaat ttgttgtaga
     6481 attttgtcac ttgtcttttt attggttttt aatgctactt tagtttcttt ttctctataa
     6541 ttattaataa aaagcagcac tatctacaac catccttacc aatcccagtt ttccgtaaaa
     6601 gtttatttga atgacaataa tttaataaat ctattttcaa tatcactagt gagtttagca
     6661 attacaatcc tgtttactct tttgtactct aaattttcac ttcccccata gcgggcagga
     6721 gtattctggc ggttccccac ctttctctct tcgacgattc gataaaaccc tactttgcat
     6781 aatatttaaa aatttatcca tagcatcaaa aacattatta aactcatatt tccccactac
     6841 actagctcta tcagctgtca tataaacttc aaacttatct tcattcttct caactctaac
     6901 ttgatattat tgtcgattat ttttctcgcc ttcgaatata gcgtatctta attcctgata
     6961 acccaataaa taaatatctt cttctaaaat ttttttatat tccattaaat caaaattcat
     7021 ccattttatc tccttgttat ctattggcaa cttgattagt gagcttgctc ttactattca
     7081 tagctctgct ttccaatgcc aacccgaaga taaagtatct ttttatttta taaaattact
     7141 cttcttctga taattttttc tttcctaaag gcagcaattc tttcaattcc tcttctgtaa
     7201 ataaatcttg attatcagga acttttatca ataactctgg gaattttctt acaaatgttc
     7261 tgattcgttc attctcctct tcttctgtat ttttctctgg ccataaacct gtttcagcat
     7321 atatcattac ttcataggca tcgtctgatg acttgaacgc tttttccatc agcgcttttg
     7381 taatgggaaa aaatactggt tcaccagtta ctcctttagg gaaagttatt tgaaactctc
     7441 catttctttc tattactgcg aatccatttc ctctataaat tttttccatt acaatttatc
     7501 ccccaagcat ttaaatatat ttataacaat atattcatca cttttaattg catttacaac
     7561 agcttcagat attccaccac ttgcgaaccc tcatggttcc caaaaacctt gccaagctcc
     7621 tgattcatta ccactaggca ctctcatatt ggtggttttt tatatctact aacacagggt
     7681 tttctcctaa actcatagga tcaagtccta ataattcttc caaaattcta ggattttcgt
     7741 cagcagcaga tatagcttta tctgtatact gctcattaga ctcaccttta cttaagctct
     7801 aatttttaag gttcaacaaa ttacgtaaaa tagccttata atccacttga ttctgatcta
     7861 attctatgtc atattcttta atcatttgtt taaaatacat atatttccag gtgaaattag
     7921 ctagaacttt agctcccatt gtcaaactag agttatcatt a
//
LOCUS       DASDYK010000111         7845 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.111, whole genome shotgun sequence.
ACCESSION   DASDYK010000111 DASDYK010000000
VERSION     DASDYK010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7845
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.111"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            45..890
                     /locus_tag="U0308_002408"
     CDS             45..890
                     /locus_tag="U0308_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2317366.1"
                     /translation="MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSEEKGADLKA
                     AGFNIRVGDYSDAESMKQAFVGIDRVLFVSGAPGNRQVEHENVVNAAKAAGVSYIAYT
                     SFAGADKSTSALAEDHFFTEKVIEKSGIAHTFLRNNWYFENEMPMIGGALSAGKFVYA
                     AENGKVGWALKREYAEVAAKAVAGADFPEILELSGPLMTYEELTKALKEATGKDFDVI
                     SSDDKGFVENLVSAGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDAL
                     RELLK"
     gene            1046..1663
                     /locus_tag="U0308_002409"
     CDS             1046..1663
                     /locus_tag="U0308_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear targeted protein LntA"
                     /protein_id="HEM2317367.1"
                     /translation="MKKLVAWFNGLSKMWKVVVIIGAVFVVIIALTTGENEGEQTKTK
                     TNSDKIVKTTSKPKLSTKDLALIKADLAEFEGRELSSEKILKDTIKEESWSDLDFAND
                     NINQMIGTMKRYQQEILNIDAVKRSSEASADTEAFKKVFKEWSDFKIERIQVTIDLLN
                     GKKDSEAAFKKSYPNQIIFKKVRTNKLQTALNNLKVGYELLDSQK"
     gene            complement(1696..2964)
                     /locus_tag="U0308_002410"
     CDS             complement(1696..2964)
                     /locus_tag="U0308_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="module of peptide synthetase"
                     /protein_id="HEM2317368.1"
                     /translation="MVKITSYPAEPSDVKHYISGEKMKNDHHLHTVLTFDNHLNIDVL
                     KKAVMQSTKKLPLLLCHFKETKKGAFWQESVFSAEDLVFLVETQAPETEVDRALVTKL
                     STENGPQICFTVVRADTSDQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAAN
                     LSLGSRSLKQIFDQLSRKDIKSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKED
                     FSEIIHFAKEHEATVNDVLFAAMARTVQQTTGQQEMSIDCPVDLRKYLPSKTSSGITN
                     LTANITCQISADDDLTSFESTLQAVKNSLNPQKNSFAPLRIYYLLELIFKKKNYSVAK
                     KASEKMYSIPKTSFTNIGIIDEEKLVFEGSTLTDCFICGSLKYAPFFQVAATTFRGEL
                     TLSTNLHGTTQDHAWQKDFLEQMISEFPSK"
     gene            3102..3604
                     /locus_tag="U0308_002411"
                     /pseudo
     CDS             3102..3604
                     /locus_tag="U0308_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463969.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2004 domain-containing protein"
     gene            complement(3646..5682)
                     /locus_tag="U0308_002412"
     CDS             complement(3646..5682)
                     /locus_tag="U0308_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEM2317369.1"
                     /translation="MASYGGKKRNNKKAIIIGSIAAVVVLAGIAIYFFIQNQHKDEKN
                     ALAAAETFTSNIAKEKYDKLGSSVSSESLKKVEFTKKEMEDKYQAVYDGIGAKDIKVK
                     NLKSVYDDKENKFNLTYELEMRTSLGKLATQKYKTTISKQDDDWKIDWKPALIFPGMV
                     KTDKVRITEDEAERGQIVDRNGNPLATTGQFAEAGVVPSKLGEGDEKVKNIADISKKL
                     EVSTDYINKQLDQKWVQADSFVPLVTLNKDNLPEATGLTYAQKEMRTYPLNEATSHLI
                     GYVGEVSAEDIEKNPKLSVGDVIGKSGLERYYDKQLRGKNGGAIKIINDQTKQEDTLQ
                     KIDKKDGEEIKLTIDAAVQKKAFDSLGSETGAVTMINPTNGELLALVSTPSYDANQMV
                     LGITSEDYAKYNDDKRLPFLARYANRYAPGSTFKTITATIGLDTGITKPDKVREISGL
                     QWQKDASWGKYFVTRVHDVPKVNMTDALVHSDNIYFAQEGLEIGKDKLTAGLKKFDFD
                     KEYNLPFTMKPAQISNDGLNSEILLADTSYGQGELLMSPIQQAIAYSAIASDGKMPYP
                     KLDTKEKAGKETQATEAASANQVKAALVKTVSDPAGTAHALQIQGHSIAAKTGTAELK
                     EKQGEDGLENGFVYAFDADNPNYLMVGMIENVKGRGGSGLVIDKLKPVIESMYK"
     gene            5854..6168
                     /locus_tag="U0308_002413"
     CDS             5854..6168
                     /locus_tag="U0308_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317370.1"
                     /translation="MEEMEQPEKKVIIRGKGIHNKWKWSTIIVSILSVIIISVLSYQL
                     YSVSQNTPENNTNGTMQGPGGGEMPSGTPPSGEPGQAPNSSDDSSDSGTSDSTTSSDG
                     TL"
     gene            6305..7234
                     /locus_tag="U0308_002414"
     CDS             6305..7234
                     /locus_tag="U0308_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HEM2317371.1"
                     /translation="MARHAQKRKARKGRIFVTILVALLILVGVVAVIGYFQYQSSLKE
                     AQNESKLKDYKFNGAKAVGDEINVLLIGSDSRGEDQGRSDSLMIAHYNTKTNTPKLVS
                     IMRDTYVDIPGHGKNKINAAYSYGGPELVRQTIKENFGVDVQYYVVANFEGFPKIVDT
                     LAPEGIKINAEKDMSKNIDANIKKGEQVMDGKTLLQYARFRKDAEGDFGRIRRQQQVL
                     EALKEQAIDVGDVAKIPDVIGKLQGYSSTNIPTGTLMSIGADFLLGKTETMEKFAIPV
                     EGKWHNERIDGAGAVLRLDDMAANAKALQDFLK"
     gene            complement(7282..7830)
                     /locus_tag="U0308_002415"
     CDS             complement(7282..7830)
                     /locus_tag="U0308_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4240 domain-containing protein"
                     /protein_id="HEM2317372.1"
                     /translation="MKKVSSLLTQDQFWGIIDNSDKGSKLEELLEKLSEDELFGYDYW
                     WNYFHKKSYNQSLWAVAYVVLGGCSDDGFDYFRYWLITRGKAVFTSAVENADTLCGEF
                     DLLTEDEYPENEEVAYLVMDIFENKLGKDFDDAENEAESRIEFEEVSMPPIDFEWDED
                     DEDSIKKVCPNTFAKWWNNDKF"
BASE COUNT         2416 a         1432 c         1541 g         2456 t
ORIGIN      
        1 aatgtacagc tttaatatta aaaaaatttg aaggagtggt ttaaatgact tatttagtaa
       61 caggtgcaac aggtggactt ggaggctacg cattaaatta tttgaaagag ctcgttccaa
      121 tgtccgatat ttatgcttta gttcgtagcg aagaaaaagg tgcagacttg aaagcagcag
      181 gatttaacat ccgagttggt gattatagtg atgcagaatc aatgaagcaa gcattcgtag
      241 gaatcgaccg tgtattattt gtatcgggcg ctcctggtaa tcgccaagta gaacacgaaa
      301 acgtggtaaa tgcggcaaaa gcagcaggtg tttcttacat tgcttacaca agttttgcag
      361 gcgcagataa atccacaagc gctttagcag aagatcattt ctttaccgaa aaagtaatcg
      421 aaaaatccgg aatcgcgcac actttcttgc gtaacaactg gtacttcgaa aatgaaatgc
      481 caatgattgg tggcgcatta agtgctggaa aatttgtata cgctgctgaa aatggaaaag
      541 ttggctgggc attaaaacgc gaatacgcag aagtagccgc aaaagctgtt gcgggcgctg
      601 acttcccaga aatccttgaa ttatctggcc cactcatgac atacgaagaa cttacaaaag
      661 cattaaaaga agcaactgga aaagatttcg acgttatttc ttcagatgat aaaggatttg
      721 tagaaaattt agtttctgcc ggtttaccac aacctgtcgc agaaatgttc ttatccttcc
      781 aacacgacat taagaacgac caattagatg ttacttctga tgattttgaa aaagcattag
      841 gaaaaccatt aacgaatcgc gtagatgcac ttcgggaatt gttgaaataa aaagggacag
      901 cctaccttga tttgaggtag gctgtttttt tactgcgcat tttattatct tttcagtagt
      961 atttatacga ccttttaaac atttgataag aatgaggcta taattttata tgctctttat
     1021 ttattaaatg aaagaaggaa aacgagtgaa gaagttagtt gcttggttta acggattatc
     1081 aaaaatgtgg aaagtggtag taataatagg cgcagttttt gtagttataa tagccttaac
     1141 aacaggagag aatgaaggtg aacaaacgaa gacaaaaact aacagcgata aaattgtaaa
     1201 aacgacgagc aagcccaagc tttcaaccaa agatttagcc ttgattaaag ctgatttagc
     1261 agaatttgaa ggtcgggaac tttcttcaga aaaaattttg aaagatacaa ttaaagaaga
     1321 aagttggtcg gatttggatt ttgcgaatga taatattaac caaatgattg gcacgatgaa
     1381 acgatatcag caagaaattt taaatataga tgcggttaaa agaagttcag aagcctcggc
     1441 ggatacggag gcatttaaaa aggttttcaa agaatggagt gatttcaaaa tagagcggat
     1501 acaagtaact atcgatttac taaatggtaa aaaagatagt gaagctgcat ttaaaaaatc
     1561 atatccaaat caaattatct ttaaaaaagt gcgcacgaat aaattacaaa cagccttaaa
     1621 taacttgaaa gtaggctacg aattattgga tagtcagaaa taagaaaaag ccatcctgct
     1681 gaggatagct ttttcttatt tagaaggaaa ttccgaaatc atctgctcca aaaagtcttt
     1741 ctgccaagca tgatcttgcg tagtaccatg caaattagta ctcagtgtca gctcgccgcg
     1801 gaaagttgta gcagcgactt ggaaaaacgg cgcatacttt aaagaaccac aaataaaaca
     1861 atctgttaaa gtgctacctt caaaaacgag tttttcctca tcgataatac ctatattcgt
     1921 aaaacttgtt ttcggaatag aatacatttt ttcagaagct ttttttgcaa cagagtagtt
     1981 ctttttcttg aaaatcagtt ccaataaata ataaattcgt agaggtgcaa agctgttttt
     2041 ttgtggattg agtgaatttt tgacggcttg gagtgtactt tcaaatgacg ttaggtcatc
     2101 gtctgcgctg atttggcatg taatattggc ggtgagattg gtaattccgc tactggtctt
     2161 actcggcaaa tacttacgga gatccaccgg gcaatcaatt gacatttctt gttgccctgt
     2221 tgtttgctga acagtgcgcg ccattgcggc gaacagaaca tcattcacag ttgcctcgtg
     2281 ctcttttgca aagtggatga tttccgaaaa atcctctttt ggtagcttag tccaaataac
     2341 tttcggattt ttcgggtcac ctttaagagg gaaagttggg ttatggacag ctttttgctt
     2401 cgttttttcc gtaaaaatgg actttatatc tttacgcgaa agttgatcaa aaatttgctt
     2461 taaactccgg gaacctaagc tcaaattcgc cgcataatcc ggattttcaa gcagattaga
     2521 ataaagctca ctcaataaat aaagatattc cttaaatcca gcgccatctg ctaacatatg
     2581 attcataata accacaagct gatcagaagt atcagcccga acaacagtaa agcaaatttg
     2641 cggcccattt tctgtggaaa gcttcgttac aagtgctcgg tccacttcgg tttctggcgc
     2701 ttgcgtttcc actaagaaaa ccaaatcctc cgcagaaaaa acactttctt gccaaaaagc
     2761 accttttttc gtttctttaa aatgacaaag taatagcgga agttttttag tagactgcat
     2821 cactgctttt tttagaacgt ctatatttaa atgattatca aacgtaagta ccgtatgcaa
     2881 atggtggtca tttttcattt tttctccaga aatataatgt ttaacatcag aaggttcagc
     2941 gggataactc gtgattttta ccatgggact tccttctttc ttcggtttaa atagttgtta
     3001 atagtttccc tgaaagcagt gctgcgaaac aagttgcgga tcaaagtgag tttaagttat
     3061 actgagcgta tgcaagctac tatttctagg aggcaccgaa catgacaaac agaacattaa
     3121 caaccaagtt actaggaaca ctaagctata cgcaagaaaa tggaacgatg atggacgccg
     3181 taattccttt ggatggcaaa gaagtaaagg ttgattatag tatttttgaa aagcttactt
     3241 cagaagatta ttttaaagat atcgttactt taacggatca aattccggaa ctacacctag
     3301 aagcgaaaaa actattttag agcaatttga tggaaatgat acgcttacta tttattttaa
     3361 ttttcataca gatgaattgc ccgaagcggt tttagaagtt accgaatgtg atgcgctaga
     3421 aaatataaca aaggaaatct taatcgataa actagttttg tcaggcgttt ggttttcgga
     3481 aaatgccaat aatgagttgg atttaacatt cgatttcaaa ctattaccag aagttagcga
     3541 tgaactttta gttgttcgtt ttaatacaaa aggagaaatt actgaattaa cccatgaaag
     3601 ttaacaaaaa agagccattc tgttcgcgaa cagaatggct cttttttatt tatacatact
     3661 ttcaataact ggttttagct tatcaattac aagtccgcta ccaccgcgac ctttgacgtt
     3721 ttcaatcatt cctaccatga ggtaattggg attgtcggca tcgaaggcgt aaacaaaacc
     3781 attttcaagg ccatcttcgc cttgtttttc ttttagttcg gctgtaccgg ttttggctgc
     3841 gatactatga ccttggattt gtagggcgtg tgctgtacca gctggatcag aaacagtttt
     3901 gactaaagct gctttgactt ggttggcaga agcggcttcg gttgcttgtg tttccttgcc
     3961 agctttttct tttgtatcta gttttggata aggcattttt ccgtcgcttg caatggccga
     4021 gtatgcaatc gcttgttgaa ttggcgacat cagtaattca ccttgtccgt aagatgtgtc
     4081 agctagtaat atttccgagt tcagcccatc attcgaaatt tgtgctggtt tcattgtgaa
     4141 aggtaagtta tattccttat caaaatcgaa ttttttcaag ccagcagtta gtttatcttt
     4201 gccgatttct agaccttctt gagcgaagta aatgttatca gagtgcacaa gcgcatccgt
     4261 catatttact tttggaacat catggacacg agtgacaaaa tacttgcccc atgaagcatc
     4321 tttttgccac tgtaagccag aaatttcacg gactttatca ggttttgtaa taccagtgtc
     4381 cagcccaatt gtggctgtaa ttgttttaaa ggtagagcct ggtgcgtaac gatttgcgta
     4441 tcttgctagg aaaggtaggc gtttgtcgtc attatatttt gcgtaatctt cggaagtgat
     4501 cccgagcacc atttggttgg catcataaga aggggtgctc actaacgcta atagttcgcc
     4561 atttgtcgga ttaatcatgg tcacagcacc agtttcggaa ccgaggctat caaaagcttt
     4621 cttctgaacg gctgcatcaa tcgttagttt aatttcttcg ccatcttttt tatcgatttt
     4681 ttgtaaagta tcttcttgct tggtttggtc attgatgatt ttaattgcgc caccattttt
     4741 accgcgcagt tgtttgtcat agtaacgttc taagccactt ttcccaatga catcgccaac
     4801 gctgagtttt ggattttttt caatgtcttc ggcgctaact tcaccgacat aaccaatcaa
     4861 atgcgaggtt gcttcattta atgggtacgt ccgcatttct ttttgagcat acgtaagtcc
     4921 agtagcctca ggtagattat ctttattcaa tgtaactaaa ggaacgaagc tatctgcttg
     4981 gacccatttt tgatcgagct gtttgttgat gtaatcagtg gagacttcta gttttttgct
     5041 aatatccgca atgtttttca ctttctcgtc gccttcacca agcttcgaag gcactacacc
     5101 agcttcggca aattgaccag tagtcgcgag tggattacca tttctgtcca ctatttgacc
     5161 acgctctgct tcgtcttccg tgatgcgcac cttatctgtt ttcaccattc cggggaaaat
     5221 gagagctggt ttccagtcga ttttccagtc atcatcttgc ttggaaatag tcgttttgta
     5281 tttttgtgta gcgagtttcc cgaggctagt ccgcatttct agttcgtatg ttaagttgaa
     5341 tttgttttct ttgtcatcat agacagattt tagatttttt actttaatat cttttgcgcc
     5401 aatcccgtcg taaacagctt gatacttatc ttccatttct ttctttgtaa attcgacttt
     5461 tttcagggat tcacttgaga cgctacttcc caacttgtcg tacttttctt tagcgatatt
     5521 tgatgtaaaa gtttctgcgg ctgctaaagc atttttttca tctttgtgtt gattttgaat
     5581 gaaaaagtaa atggcaatgc ctgcgaggac gacaacagcg gcaatgcttc caatgataat
     5641 tgcttttttg ttattcctct ttttcccacc ataactagcc ataatacacc ccttaatttc
     5701 atgttatatt caattaatta taccaaacac ttctaaaaaa gttgaaaaaa ttaaagaaaa
     5761 ctttagattt gcccgacata tttttttcta attcatgtca taatttgttc ttatttgctt
     5821 ggtaaagtag tggtaacgaa aggatgatgt tggatggaag agatggaaca accagaaaag
     5881 aaggtcatta ttcgtgggaa aggcatccac aataaatgga agtggagcac gattattgtc
     5941 agtattcttt ctgtcataat tattagtgtt ttaagttatc agctgtattc agttagtcaa
     6001 aataccccgg aaaataatac taatggaacc atgcaaggtc ctggtggagg ggagatgccg
     6061 agtggaacgc cgccgtccgg tgaacctggc caagcgccaa atagttcaga tgatagttct
     6121 gactctggaa caagtgatag tactacaagc agcgacggaa ccctttaata tttgcgagcc
     6181 ctctagaaat catcatttta gggggctttt tccaatcttt aaaaaatctt atggaattat
     6241 cgctcctatt ttttgtcatt ttattgtaat atggaagtaa gttacaataa aagaggtgtg
     6301 aaatatggca agacatgcac aaaaaagaaa agcgcgcaaa ggtagaattt ttgttacgat
     6361 tcttgtagcc ctattaattt tagttggtgt agttgcagtt ataggttatt tccaatatca
     6421 atctagctta aaagaagcgc aaaatgaaag taaattaaaa gactacaaat tcaatggtgc
     6481 caaggcagtt ggcgatgaaa tcaatgtact acttatcggt agtgactctc gcggtgaaga
     6541 ccaaggccgt tcagacagct tgatgattgc tcattataat acgaaaacaa atacgccaaa
     6601 actggtatcg atcatgcgtg atacatacgt agatattcca ggacacggca aaaacaaaat
     6661 caatgcagca tattcatacg gcggaccaga acttgtacgc caaacgatta aagaaaattt
     6721 tggagtagac gtacaatatt atgtagtagc caattttgaa ggtttcccta agattgttga
     6781 tacacttgca ccagaaggaa tcaaaatcaa cgcagagaaa gatatgtcga aaaatattga
     6841 cgcaaacatt aaaaaaggcg aacaagtaat ggatggtaaa acattgttac aatatgctcg
     6901 cttccgtaaa gatgcagaag gagacttcgg tcgaattcgt cgtcaacaac aagtattaga
     6961 agctttgaaa gaacaggcga ttgatgttgg tgacgtggca aaaatccctg atgttatcgg
     7021 aaaactacaa ggttattctt ccactaatat cccaacagga acattaatgt ccattggcgc
     7081 agatttccta ctaggaaaaa cagaaacaat ggaaaaattc gcgattcctg ttgaagggaa
     7141 atggcacaat gagcgaattg atggagcggg agcagtgctt cgtttagatg atatggctgc
     7201 taacgcaaaa gctttacaag attttttgaa ataacaaaaa aacacggaag tcctcattaa
     7261 taggatttcc gtgtttttat attagaattt gtcgttattc caccattttg caaaagtgtt
     7321 tgggcatact tttttgatag aatcttcgtc gtcttcatcc cactcaaaat ctattggagg
     7381 catagatact tcttcaaact caattctact ctctgcttca ttttcagcat cgtcaaagtc
     7441 tttccctagt ttgttctcga aaatatccat cactaagtaa gctacctctt cattttcagg
     7501 atattcatcc tctgttaata aatcaaattc accgcaaagc gtatcggcat tttccacagc
     7561 agatgtgaat acagccttac ctcttgttat taaccaataa cggaaatagt caaatccatc
     7621 atcactacag ccacctaata ctacgtaagc aacagcccag agcgattggt tataagattt
     7681 tttatgaaag tagttccacc aataatcata accaaaaagt tcatcctcac tcaacttttc
     7741 tagtagttct tctaatttgc tgcctttgtc agagttatca ataattcccc aaaactgatc
     7801 ttgggttaat aaagatgata cttttttcat ttgattttcc tccag
//
LOCUS       DASDYK010000112         7790 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.112, whole genome shotgun sequence.
ACCESSION   DASDYK010000112 DASDYK010000000
VERSION     DASDYK010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7790
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.112"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..409
                     /locus_tag="U0308_002416"
     CDS             <1..409
                     /locus_tag="U0308_002416"
                     /inference="COORDINATES: protein motif:HMM:NF018914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DnaD domain protein"
                     /protein_id="HEM2317373.1"
                     /translation="SAAAEDSNNNLTSELEERERRAAAEIPIDLNVSPLITYEGSLGL
                     LNTFQREDLFHWESELSRPIVNFAIYHASMRGARGYPLIKDILCKWHQNNIKNLSEAV
                     AFEKEQKSKAQIKGGAYVRGGKRTNQQNQNFDW"
     gene            357..1178
                     /locus_tag="U0308_002417"
     CDS             357..1178
                     /locus_tag="U0308_002417"
                     /inference="COORDINATES: protein motif:HMM:NF013828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEM2317374.1"
                     /translation="MSVEENEPINKIKISTGDREPLTFGNIQFVENRTCRDCGNEYPV
                     YSRNGIEADFCINCDNNRVQKDMQKRYEETERQRPNRLMKEFSFVPDEIKSQSFKTFK
                     PETTEEHEALQQVLHFVKSFPNDQTLVLAGSVGTGKTHLAYSAAREIIKKGYIVIFVT
                     VPELLESIRSTFKNADLSETEVKRIYKEADLLILDDIGAEYIKDYGNGSWAAEIIFDI
                     VNARTTKSTIYTTNLAGKDIEEHYGGIQGKRIVSRMKKNSTAIKLTGKDRRTSEW"
     gene            1178..1369
                     /locus_tag="U0308_002418"
     CDS             1178..1369
                     /locus_tag="U0308_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317375.1"
                     /translation="MVEATQVEYIGFSGPEAAHVIIWKLLDKKIAKTMCYTAEEVEEQ
                     LKLHAWKFDGYEVLSDENF"
     gene            1356..1577
                     /locus_tag="U0308_002419"
     CDS             1356..1577
                     /locus_tag="U0308_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317376.1"
                     /translation="MKTFKIWLKIYWISGLCQNRSFEVEARTFKEAFDNAEKMVPRKK
                     VKKIKHLQGDIVGYIFEPPTKGANNFETN"
     gene            1534..1773
                     /locus_tag="U0308_002420"
     CDS             1534..1773
                     /locus_tag="U0308_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317377.1"
                     /translation="MSRQRKELIILKRIEYVEIIKKIPGTPFRLGGIYEIERMGSANA
                     RVRINNSIYQVPKEALQVVEQVERERWEENDKIHD"
     gene            1754..2191
                     /locus_tag="U0308_002421"
     CDS             1754..2191
                     /locus_tag="U0308_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HEM2317378.1"
                     /translation="MIKFTINIPPHPQERPRFRNAGNFVQTYDPPKSKEYKKKIANVA
                     KMYAPGTPISTPIKIKLIFFVPIPKSKSKAWKQRAVLGQEFPAVRPDIDNFTKAVLDA
                     LNGIMFSDDGKIVELIAYKRYSDLPRTEVSITELVSEVQTKLF"
     gene            2212..2832
                     /locus_tag="U0308_002422"
     CDS             2212..2832
                     /locus_tag="U0308_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317379.1"
                     /translation="MINCYAEVRNVQVKPNDTVEIKLVVGVEELSGQNEELMKLVGRE
                     VNTSLESNQISYREKVDPETREPVLKYIVHKDGTVAMYSQEKLDLELEELPEEERSSV
                     INKSEIDEYILACDSGPMTIPGGIFEGKEVLQKLSEGEDIEDLAKFYGTPVKEMQDTL
                     DEYRKFVAAKAKAWQEWKNNSEQTADSEEQESENDGQATLEFETEE"
     gene            2873..3253
                     /locus_tag="U0308_002423"
     CDS             2873..3253
                     /locus_tag="U0308_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317380.1"
                     /translation="MPSEELNLFDLMDYYPEQAAKKKRKEEALKPIKTHRNDRIDYPA
                     ARAEIERILGKKVTTVCGYYDHPINKELRWIFNFEIGFCYINDKCQLYEMQPGLEGFR
                     YRGKVHEEVFYNADDRKRATTTIE"
     gene            3213..3389
                     /locus_tag="U0308_002424"
     CDS             3213..3389
                     /locus_tag="U0308_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317381.1"
                     /translation="MQTIEKELLQRLSDRRIGVQHQIASLVHTEKCTLLEALKMTDKE
                     IDSTFNEMRMELDS"
     gene            3401..3823
                     /locus_tag="U0308_002425"
     CDS             3401..3823
                     /locus_tag="U0308_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317382.1"
                     /translation="MTTVEKLSIREQALNKMLTEMNEAHSGAEDVIHNWLCNQVEEAI
                     FEGIMKDDRSISGAVKYCSSRASKHQAEGVAMIDDKTVFSWVRKYFISEKVSKSIVKA
                     TVKATATKPEKTKVKAKKKPKKTTAQEGYEQLDLLDFL"
     gene            3820..5181
                     /locus_tag="U0308_002426"
     CDS             3820..5181
                     /locus_tag="U0308_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PcfJ domain-containing protein"
                     /protein_id="HEM2317383.1"
                     /translation="MKREAQNYIDNKLKPPKAFFEWCFSQIPTYKWSNKKETILASNR
                     KNCSVIEQKLRKNSRLTFFGKLNVFGIVLVTSKRIEIQSYAFWNRVVEGKEIIEFDLV
                     NFEQFAEGEHVKVASSDGKMWFGLIPVYGGMSGGPYSMIQLFENDWKEKIRSKSELKY
                     LEIPHLDFKEIETIYKYRVEIEFLQKIKARQLAKEVMYPVTQYTNGSFRKTVDMRTIN
                     AKWLKENKPFFKNSDRGFMEFELARRIQKRRGKVVSGIEKYLDYRAINKIPEGVGIVR
                     FQNWIIKNKVDFSYYLDYLNLMRDLNIAIDSENIIMPKNLVIAHDNAVKLLYQMKHEV
                     EEQQYKVRFEKIKDLEKTIDNYAFIVPKQASDLLTEGKALSHCVGGSNYIKQHIEGKT
                     TIIFVRDKQDLEKSFYTLEYKNGQIYQLRGKHNCDPTKDVQEAANKWAKLLKSKTKVL
                     QHS"
     gene            5198..5722
                     /locus_tag="U0308_002427"
     CDS             5198..5722
                     /locus_tag="U0308_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003769972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317384.1"
                     /translation="MRESEFRGKRIDNREWIYGNLMQFEDSATFIFADERKGASTLTY
                     AHFIINNMHAIDEKTLGSCIGREDEDEKTIFENDIVQVVLEHWPMGYYQEVEYIGVVK
                     YDTDICAYYLDLIKPPAVSGETIPDEIDGIKITREDPEDFDTRFYFDASVDSAAMTVI
                     GNIHENPELMEVAE"
     gene            5719..5928
                     /locus_tag="U0308_002428"
     CDS             5719..5928
                     /locus_tag="U0308_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317385.1"
                     /translation="MNDKKVRFYVSTGMHGSLETETFLLKADLNIEFDILTPEQLEKE
                     ITESYDDWLANNIDSGWSIEKEVEE"
     gene            5925..6113
                     /locus_tag="U0308_002429"
     CDS             5925..6113
                     /locus_tag="U0308_002429"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317386.1"
                     /translation="MKKYELIMTREEVYHLHRVLMQDIILSTWGVSTKDPEDEEAFLA
                     HIELSKGLARKVTRSEVK"
     gene            6113..6445
                     /locus_tag="U0308_002430"
     CDS             6113..6445
                     /locus_tag="U0308_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014930675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317387.1"
                     /translation="MPGLIAKQPNGLYCRISTVVEAQTHHDMTKEELEYYLINERSLD
                     INLVTLDDWLAFYEVDFNVAIKQLGSGSGNLTFEEAKAWLIEVGYQHADKFMEKIAYK
                     WDEWEEGK"
     gene            6442..6717
                     /locus_tag="U0308_002431"
     CDS             6442..6717
                     /locus_tag="U0308_002431"
                     /inference="COORDINATES: protein motif:HMM:NF019467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1642 domain-containing protein"
                     /protein_id="HEM2317388.1"
                     /translation="MKKITQEYVEGVKDYNGLTVIKAPVVSEAVADWFEANKDNLGLE
                     IWMYIYNFDKHKNDCDSFCMFMNDKSGKQLETLISMQYGYYVQKEES"
     gene            7037..7288
                     /locus_tag="U0308_002432"
     CDS             7037..7288
                     /locus_tag="U0308_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3850 domain-containing protein"
                     /protein_id="HEM2317389.1"
                     /translation="MTVHKLKILPEFFEKKRTLVKAFEIRKNDRNFEVGDTLVLQEFD
                     NGEYTGREYWEDVVYITDYLQKEGIVVMGTLPNEREYPF"
     gene            7300..>7790
                     /locus_tag="U0308_002433"
     CDS             7300..>7790
                     /locus_tag="U0308_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317390.1"
                     /translation="MYKTEKRTLRQNKMIHALISDIVKHTYNDFEATKPRSFSNDCRV
                     VKETLKVAYAAEANLPGDFSTAKLSKIQARDFISSIIEFCFQFDIPLSASGLQMTDDI
                     NRYLFLCIKYRKCAVTGRRGEIHHVDPVGAGRDRRNYDHSKSRLICLSREMHTEAHQI
                     GWLT"
BASE COUNT         2929 a         1130 c         1731 g         2000 t
ORIGIN      
        1 tagtgctgct gcagaagata gtaataataa cttaactagt gaactagaag aaagagagcg
       61 gcgagcagca gcagaaatcc ctattgattt aaatgtatct cccttaatca cctacgaagg
      121 tagtctaggt ctattaaata cttttcaaag agaggattta tttcactggg aatcggagtt
      181 aagtcgaccg atagtcaatt ttgctattta ccacgcaagt atgagaggcg cacgtgggta
      241 tccgttgata aaagacatcc tgtgcaaatg gcatcaaaat aatataaaaa atctttcaga
      301 ggctgtcgca tttgaaaagg aacaaaaaag taaagcacaa ataaaaggtg gtgcttatgt
      361 ccgtggagga aaacgaacca atcaacaaaa tcaaaatttc gactggtgat agagagccac
      421 tgactttcgg aaacatccaa tttgtagaaa ataggacttg tagggattgt ggaaatgaat
      481 accccgttta ctcaagaaat ggcattgaag cagatttttg catcaattgt gacaataatc
      541 gagttcaaaa agatatgcag aaacgctacg aagagacaga gagacagcga cctaacagac
      601 tgatgaaaga attttctttc gttcctgatg agatcaaatc gcaatctttt aaaacattta
      661 aaccagaaac gacagaggag catgaagctt tgcaacaagt tcttcatttt gtaaagtcat
      721 ttcctaatga tcagacttta gtgctagctg gttctgtagg aactggtaaa actcatttag
      781 catattctgc agcaagagaa atcataaaaa aaggttacat cgtcattttt gttaccgttc
      841 cagaattgtt ggaaagtatt cgttccactt ttaaaaacgc agacctttca gaaacggagg
      901 taaaacgaat ttataaagaa gctgatttac tgattttaga cgacattggg gctgaatata
      961 ttaaagacta cggaaacggt agctgggcag cagaaataat attcgatatt gtgaacgctc
     1021 ggacaacgaa gtcgacgatt tacactacaa atttggcagg aaaagatatt gaggaacatt
     1081 acggtggcat tcaaggaaaa cgaattgtat cccgtatgaa gaagaatagt acagcaataa
     1141 aattaactgg caaggatagg aggacaagtg aatggtaatg gttgaagcaa cacaagtaga
     1201 atatattggc ttttctggtc cggaagcggc gcacgttatt atctggaagc tattagacaa
     1261 gaaaatagcg aaaacgatgt gctacacggc cgaagaagtc gaagagcagc taaagctgca
     1321 cgcttggaaa tttgatggtt atgaggtctt gagtgatgaa aacttttaag atctggctga
     1381 aaatctactg gatttctggc ctttgtcaaa atagaagttt tgaggtagaa gctagaactt
     1441 tcaaagaagc atttgataat gcagaaaaaa tggttccacg gaaaaaagtg aagaaaataa
     1501 aacatctgca gggagatatt gtaggttaca tttttgagcc gccaacgaaa ggagctaata
     1561 attttgaaac gaattgagta cgttgaaatc attaaaaaaa ttcccgggac accttttaga
     1621 ttaggaggga tatacgaaat agaacgaatg ggttcagcaa atgcacgtgt gagaattaac
     1681 aacagtattt atcaggtgcc aaaagaagca ctacaagtag ttgaacaagt ggaacgtgaa
     1741 cggtgggaag aaaatgataa aattcacgat taatattcct ccacatccac aagaacgacc
     1801 gcgttttaga aatgcaggca atttcgtaca aacgtacgac ccgcctaagt caaaagagta
     1861 caaaaagaaa atagcaaatg tggcaaaaat gtatgcgcca ggaacgccaa taagcacgcc
     1921 tattaaaata aaattaattt tctttgtgcc aatccctaaa tcaaaatcta aagcctggaa
     1981 gcagcgagcg gtccttggcc aagagtttcc agctgtaagg ccagatattg ataatttcac
     2041 aaaggctgtg ctagacgcat taaacggcat catgtttagt gacgatggaa agattgttga
     2101 attaatcgct tataagagat attcagactt acctagaacg gaagttagca taacagaatt
     2161 agtttcagaa gttcaaacga aattatttta aaaaaattgg aggaacaaga aatgattaat
     2221 tgctacgcag aggttagaaa tgtacaggtg aaaccgaatg acacggttga aattaaacta
     2281 gttgttggtg tagaagaatt atctggccaa aacgaggaac ttatgaagct cgtaggtaga
     2341 gaagtaaata cttctctcga aagcaaccaa atatcttacc gtgaaaaggt tgatccagaa
     2401 acacgagagc ctgttcttaa gtatattgtt cacaaggacg ggactgtagc gatgtactcg
     2461 caggaaaagc ttgatttaga attagaagaa ttgcccgaag aagagcgttc tagcgtgata
     2521 aacaaatcag agattgatga atatattctc gcttgtgata gcggacctat gaccattcct
     2581 ggagggattt ttgaagggaa agaagtgctt caaaaattat cagagggtga agacatagag
     2641 gatttggcta agttttatgg aacgccggtt aaagaaatgc aagacacttt agatgaatat
     2701 cgtaaattcg tagctgccaa agcaaaagcg tggcaagaat ggaaaaataa ttctgaacaa
     2761 acagctgata gtgaagaaca agaatctgaa aatgatggtc aagcaacttt agagtttgaa
     2821 accgaagaat aaaatgctgg gcgggaaacc gcccttgtaa agaggtgagg aaatgccatc
     2881 agaagaatta aatttattcg atttaatgga ttactatcct gagcaggctg ctaaaaaaaa
     2941 gcgaaaggaa gaagccttaa aaccgattaa aactcataga aacgatagaa tagattatcc
     3001 tgcggcaaga gccgaaatag agcggatttt aggtaagaaa gtaactacgg tttgcggata
     3061 ttatgatcac cctattaata aagaacttcg ttggattttc aattttgaaa taggattttg
     3121 ctacatcaat gataaatgtc aactatacga aatgcaaccg ggtttagaag ggtttcgata
     3181 tcgcgggaaa gtacatgagg aggttttcta taatgcagac gatagaaaaa gagctactac
     3241 aacgattgag tgatagaaga ataggagttc aacatcagat tgcttcactt gtgcatacag
     3301 agaagtgcac gttgctagaa gctttaaaaa tgacagataa agaaatcgat tcaacattta
     3361 atgaaatgcg aatggagcta gatagttagg aggatgaata atgacaactg ttgaaaagtt
     3421 aagcataaga gagcaagcgc tcaataaaat gttaacggaa atgaatgaag cacattccgg
     3481 agccgaggat gtgatacata actggctctg taatcaagta gaagaagcga tttttgaagg
     3541 cattatgaaa gatgatagaa gtattagtgg ggcggttaaa tactgctcct caagggcttc
     3601 aaagcatcag gcggaaggtg tggccatgat tgatgacaaa actgtctttt cctgggtgag
     3661 aaagtatttt atatcagaaa aagtgtcgaa aagtattgta aaggctacag ttaaagcaac
     3721 tgcaacaaaa ccagaaaaaa cgaaagttaa agctaagaaa aaaccgaaaa aaacaactgc
     3781 gcaagaaggg tatgagcaat tagatttgct tgatttctta tgaagagaga agcgcaaaac
     3841 tatattgata ataaattaaa accaccaaaa gcgttctttg aatggtgttt ctcacaaatt
     3901 ccaacttaca agtggtccaa caaaaaagaa actattctag cttccaatcg aaaaaactgc
     3961 agtgttattg aacagaagtt aagaaaaaac tctagattga cattttttgg taaattgaac
     4021 gtgttcggta ttgtcttagt tacatcgaaa agaattgaga tacaaagtta cgcgttctgg
     4081 aatcgagtag tggaaggaaa agaaataatt gaatttgatc tagtcaattt tgaacaattt
     4141 gctgaagggg aacacgtaaa ggttgcaagt agcgacggca agatgtggtt tggtttaatt
     4201 ccagtatacg gtgggatgtc tggcggacct tactcaatga ttcagttgtt tgaaaatgac
     4261 tggaaagaaa aaattcgaag taaatcagag cttaagtacc tagaaatccc gcacttagac
     4321 tttaaagaaa ttgaaactat atataaatat agagttgaaa ttgaattttt gcagaaaatt
     4381 aaagcaagac aattggccaa ggaagttatg tatcccgtaa cacaatatac aaatggatcg
     4441 tttagaaaaa cggtagacat gcgaacaatt aatgcgaagt ggttgaaaga aaacaagccc
     4501 ttctttaaga attcggacag aggttttatg gaatttgaat tagcaagaag aatacagaag
     4561 cggcgaggaa aggtagtttc tggaattgaa aaatatcttg attaccgtgc tatcaacaaa
     4621 atcccagaag gagtaggaat agttcgcttt cagaattgga ttattaagaa taaagtggat
     4681 tttagctact acctagatta tctaaaccta atgcgagact taaatattgc aatcgatagc
     4741 gaaaacataa ttatgcctaa aaatttagta atagctcatg ataacgcggt caaattactg
     4801 taccaaatga aacatgaagt tgaagaacaa caatataaag tgcgatttga gaagataaaa
     4861 gacttagaaa aaacgataga taattacgct tttattgtac ctaagcaagc atcggactta
     4921 ttaacagaag gcaaagcatt aagccattgc gtaggcggta gtaattatat taaacaacac
     4981 attgaaggga aaacaacgat tatttttgtt cgtgataagc aggacttaga aaagtctttt
     5041 tatacgctcg aatataaaaa tggccaaatt taccaactgc gagggaagca taattgtgac
     5101 ccaactaagg acgtgcaaga ggctgcaaat aagtgggcta aattactaaa aagtaaaaca
     5161 aaagtattac agcatagttg aaataggagg gtgaagcatg agagagagtg agtttagagg
     5221 taaacgaata gacaacagag aatggattta cggtaattta atgcagtttg aggatagcgc
     5281 tactttcatt tttgcagatg aacgaaaagg cgctagcaca ttaacttatg cacattttat
     5341 tattaataac atgcacgcga tagacgaaaa aacacttgga agctgtatag gtcgcgaaga
     5401 tgaagacgaa aaaactattt ttgaaaatga cattgtgcaa gtagttttag aacactggcc
     5461 aatgggatac taccaagaag tagaatacat tggagtggtt aaatatgaca cggatatatg
     5521 tgcgtattat cttgatttga ttaagcctcc tgctgttagt ggcgaaacga taccggatga
     5581 aatcgacgga attaaaatta caagagaaga cccggaagat ttcgatacca gattctactt
     5641 tgatgctagc gttgattcag cagctatgac agttataggc aacatacacg aaaatccgga
     5701 attgatggag gtggcggaat gaacgataaa aaagtaagat tctacgtttc tactggtatg
     5761 cacggatcgc ttgaaacaga aacatttctt ttgaaagcgg acttgaatat tgagttcgat
     5821 atattaacac ctgaacaatt agaaaaagag attacagagt cttacgacga ctggttagca
     5881 aataatattg attctggctg gtctatcgag aaagaggtgg aggaatgaaa aaatacgaat
     5941 taatcatgac gagagaagaa gtttatcatc tccatcgtgt cttaatgcaa gatataatac
     6001 tcagcacgtg gggggtaagc actaaggacc cggaagatga agaagctttt ttagctcata
     6061 tagagttgag taagggtttg gcaagaaaag ttacgcgatc ggaggttaaa taatgccagg
     6121 attaattgct aaacaaccaa acggattata ttgtcgaata tcaactgtag tagaagcgca
     6181 aacgcatcac gacatgacga aagaggaatt agaatattat ttaattaatg aaaggtcatt
     6241 agatataaat cttgtaacgt tagatgattg gttagcattc tatgaagtcg atttcaatgt
     6301 agctattaaa caactcggtt caggttcagg gaatttaact tttgaagaag ctaaagcatg
     6361 gctgatagaa gttggttatc aacatgcaga caaatttatg gagaaaatag cgtataagtg
     6421 ggatgagtgg gaggaaggca aatgaaaaaa ataacacaag aatatgtaga aggcgtcaaa
     6481 gattataatg gattaacggt gattaaagcg ccagtggttt cggaagctgt agctgattgg
     6541 tttgaagcaa ataaggataa tttaggatta gaaatttgga tgtacattta caattttgat
     6601 aaacacaaaa atgattgtga tagcttttgt atgtttatga atgataaatc aggaaaacaa
     6661 ttggaaacac taatatctat gcaatacggc tattatgtgc agaaggagga aagttaaacg
     6721 gaaatggatt ctaaaaatag agataacaaa agtataggag gacgaatgta tgggcgaaac
     6781 aactgaaatg attttagagg gtattttgtg tgaaaattgc ggagtattca tagatgatgc
     6841 aaatccggga tatccgagaa catgtgaaga ttgcgaggaa gataataatg aaaaacggta
     6901 aaaagttaac cagaaaccaa gcaatgatgc taaaaaataa tggtcttaat ccggataatt
     6961 ggctcatagt aaaaaatctt aataatcgaa tggagatagt acaccgagaa accggaaata
     7021 caaaggtgat ttataaatga cagtacacaa attaaagatt ttacccgagt ttttcgagaa
     7081 aaaaagaaca cttgtaaaag cgttcgaaat aagaaagaat gatcgtaatt tcgaagtggg
     7141 tgacacgctg gtattacaag aatttgataa cggggaatat actgggcgag agtattggga
     7201 agatgttgtt tatattaccg actacttgca aaaagaagga attgtagtca tgggtacact
     7261 accaaatgag cgagaatatc cgttttaaag ggtgatgaca tgtataaaac agaaaaacga
     7321 acattacggc aaaacaaaat gattcatgct ttgattagtg acatagtaaa gcacacttat
     7381 aacgattttg aagctacaaa gccgagaagc ttcagcaatg attgccgagt agttaaagaa
     7441 acgttaaaag tagcgtatgc agctgaagcg aatttaccgg gtgatttcag tacagcgaag
     7501 ttatcaaaaa tacaagctcg cgacttcata agttctatta tagagttttg ttttcaattt
     7561 gatataccgt tatccgcatc aggactgcaa atgacggatg atatcaatag atacctgttc
     7621 ttatgtatca aatacagaaa atgcgctgta acaggtcgta gaggcgaaat acatcatgtt
     7681 gatcccgtag gtgctggaag agatagaaga aattatgatc acagtaaatc aagattaatc
     7741 tgtttatctc gagaaatgca cacagaagct caccaaatcg gatggctaac
//
LOCUS       DASDYK010000113         7488 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.113, whole genome shotgun sequence.
ACCESSION   DASDYK010000113 DASDYK010000000
VERSION     DASDYK010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7488
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.113"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..926)
                     /locus_tag="U0308_002434"
     CDS             complement(<1..926)
                     /locus_tag="U0308_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEM2317391.1"
                     /translation="MVFFQRTNWKEDGEFLIRVASLLEKGFSLDATISYLSITSPKYR
                     KRYEQIITSLANGNSFSYALSKNGFPEFICSQLHYASSHGYFLQTIHETGVHMKRKAE
                     EKNALMKTFQYPLVLFSTVILVFFLLRIFLLPKFELLFTQLSTNGTVGTKFTYFLLEK
                     IPVLLGIFLLSLFLIFSFLIRKQKQKNAYDRAYFYCRIPYIRQFSRIHYSQYLSRELG
                     YLLKSGLSITHIMHLFAQEESPAFFQAIARQILPTLEQGLSLTKALEKMPIFERELYY
                     IAIHGEKNGNLAEEFLFYYNLCHQKSLQKTEK"
     gene            complement(904..1926)
                     /locus_tag="U0308_002435"
     CDS             complement(904..1926)
                     /locus_tag="U0308_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HEM2317392.1"
                     /translation="MPQKMTEHIITQALRVHASDVHIHPLSNRYLLRLRVNGTLIPLL
                     YLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIAIRLSTMPSKDFHESM
                     VIRIFRYKYPIPFLKSSVFPRSTNQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLVSSI
                     ENKDELQIITIEDPVEHHSPGFLQIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDA
                     ETAKIVVRAALTGHLVLSTVHAGDAYGVLLRLLEFGISSEELAQCLLGISFQKLTHLV
                     CTFCGEKCHPLCTHLHRKRTAIYEVLTQQEIKAYFQSNKQQIKPKYPIKRTFEKGVAY
                     GFFSAH"
     regulatory      2290..2381
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            2465..3553
                     /gene="gcvT"
                     /locus_tag="U0308_002436"
     CDS             2465..3553
                     /gene="gcvT"
                     /locus_tag="U0308_002436"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEM2317393.1"
                     /translation="MTELLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEAVRT
                     DAGLFDVSHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVV
                     YKKSETEYILVVNAANTDKDFEWMVKNIRGDVSVTNVSSEYGQLALQGPSAEKILAKL
                     TDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGV
                     APIGLGARDTLRLEAVLALYGQELSKDITPLEAGLNFAVKLKKEADFIGKEALIKQKE
                     AGLNRKLVGIELIERGIPRHDYPVFLNEEEIGIVTSGTQSPTLGTNIGLALIDTAYTE
                     IGQEVEVGIRNKKIKAKIVPTPFYKRAK"
     gene            3569..4915
                     /gene="gcvPA"
                     /locus_tag="U0308_002437"
     CDS             3569..4915
                     /gene="gcvPA"
                     /locus_tag="U0308_002437"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HEM2317394.1"
                     /translation="MAKHRYLPMTEQDEKEMLDVIGVKSIDDLFQDIPEKIRFKRDYD
                     LKPAKSEPALLRELSKLASKNANTTEYASFLGAGVYSHYIPTVVDHVISRSEFYTAYT
                     PYQPEISQGELQAIFEFQTMIAELTGMDLANSSMYDGGTALAEAAMLASGHTKRKKIL
                     ISGAVHPESSNVLKTYATGQHIEVEVIPELDGKTDIEALKKALSDDIAGFVVQYPNFY
                     GQVEPLAELEKLVHENNSLLLVSSNPLSLGLLTPPGEFGADIVVGDSQVFGIPESFGG
                     PHCGFFAVTNKLMRKVPGRLVGETVDENGKRGYVLTLQAREQHIRRDKATSNICSNQA
                     LNALASSVAMATLGKTGLVEMAKQNLDKSHYAKQKFREKGFEVLFSDGFFNEFVVKLS
                     KPIKEVNESLLDEGIIGGYDLGFYEEKYENHMLVAVTEMRTKEEIDAFVASLEGAK"
     gene            4912..6378
                     /gene="gcvPB"
                     /locus_tag="U0308_002438"
     CDS             4912..6378
                     /gene="gcvPB"
                     /locus_tag="U0308_002438"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HEM2317395.1"
                     /translation="MNLEETMPLVFERSIPGRIGFSLPESDVPETKASDYFEQAYIRS
                     VPADLPELSELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANI
                     HPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNG
                     DTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVVGEDTAALMLT
                     NPNTLGLFEKDIVEMAEIVHEAGGKLYYDGANLNAIMAKVRPGDMGFDVVHLNLHKTF
                     TGPHGGGGPGSGPIGVKKELIPFLPTPVLTKKEEGYTFDYNYPDSIGRVKPYYGNFGI
                     NVRAYTYIRTMGPDGLKLVTEYAVLNANYMMRKLQEAYDLPFDQVCKHEFVLSGNRQK
                     KLGVRTVDIAKRLLDHNFHPPTVYFPLIVGEAIMIEPTETESKETLDSFIDTMLKIAK
                     EAEENPEIVQEAPHSTYVKRLDETRAARKPILRYQKEV"
     gene            complement(6419..6799)
                     /locus_tag="U0308_002439"
     CDS             complement(6419..6799)
                     /locus_tag="U0308_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEM2317396.1"
                     /translation="MISWIIAIIILVILLGYEIYQFVMRRKAVKVLTEEEFKKGYRKA
                     QLIDVREPNEFDAGHILGARNIPVTQMKNRTTEIRQDLPVYLYCQTAQRSNRAAIMLY
                     KRGYKQVYQLKGGYRKWTGKTKSK"
     gene            complement(6861..7133)
                     /locus_tag="U0308_002440"
     CDS             complement(6861..7133)
                     /locus_tag="U0308_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317397.1"
                     /translation="MKKYPLIVIILLALVGIGLLMGGFKSFFTLIISVLIGALIFTLL
                     LRFFTNRKTDSNYQKAVKQSKNLHDPKKKTKKKRKSSFKVIDGGKK"
     gene            complement(7146..>7488)
                     /locus_tag="U0308_002441"
     CDS             complement(7146..>7488)
                     /locus_tag="U0308_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1385 domain-containing protein"
                     /protein_id="HEM2317398.1"
                     /translation="GSSFILFTVIVGMFIYLLVPTDPLWLRVVDRILLIPVVLGVAFE
                     VLQLTNKCRNIPVLKYLGVPGLWLQLLTTKEPSDDQVEVAIASFNELLRVEKEGAPVD
                     VAEPENLELLE"
BASE COUNT         2479 a         1255 c         1519 g         2235 t
ORIGIN      
        1 aatttttcgg tcttttgaag tgatttctga tgacataagt tataataaaa taaaaattct
       61 tctgctaaat taccattttt ttcaccgtgg atagcaatgt aataaagttc tctttcaaat
      121 ataggcattt tttctagtgc ttttgttagt gataatcctt gttcaagcgt aggaaggatt
      181 tgcctggcga ttgcttgaaa gaatgcgggc gattcttctt gcgcgaagag gtgcataata
      241 tgcgttatag ataaaccgct tttcagcaga tatccaagtt cgcgcgaaag gtattgcgaa
      301 taatgaattc ttgaaaattg gcgaatatat ggaattcgac aataaaaata agctcggtcg
      361 taagcatttt tttgcttttg ttttcgaata aggaaactga agattagaaa aaggctaagt
      421 aaaaaaattc ctaataaaac tggaattttt tcaagcagga aataagtgaa tttagttccg
      481 actgtgccgt tagttgataa ttgtgtaaat aaaagttcga atttaggtaa gagaaaaatt
      541 cgaagcaaga agaacaccag aataacagta gagaataaga ctagtggata ttggaaggtc
      601 ttcattaatg cgtttttttc ctccgctttt cttttcatat ggacgccggt ttcgtgaatt
      661 gtttgcaaaa agtaaccgtg actagaagca taatgaagtt gtgaacaaat gaattcagga
      721 aatccgtttt ttgaaagagc ataggaaaaa gaatttccgt ttgcaagtga agtgataatt
      781 tgttcatatc ttttgcgata tttgggcgaa gtaatgctta aatagctaat ggtcgcatct
      841 aatgagaatc ccttttcgag taaactggca actctaatta aaaattctcc gtcctctttc
      901 caattagtgc gctgaaaaaa aaccataggc aactcctttc tcgaatgttc ttttaatagg
      961 gtatttaggc ttaatctgct gtttattaga ttggaaatag gcttttatct cttgttgcgt
     1021 aagaacttca tagatagctg ttctttttcg gtgcaaatgt gtacaaaggg gatggcattt
     1081 ttctccgcag aaggtgcaaa ctaggtgtgt cagcttctga aaactgattc ctagtaagca
     1141 ttgcgctaat tcttctgagc taataccgaa ttcaagtaat cttaataaaa ctccgtaagc
     1201 atctccggca tgaaccgtgc ttaaaactaa gtgaccggtt aatgcagcac gaacaactat
     1261 tttagcggtt tctgcatcgc gtatttcccc gataattaaa atatcaggat catggcgtaa
     1321 gacggagcga atgatgggtg cataggtaat gcttgctttt tcgttcactt cgatttggag
     1381 aaagccggga gaatgatgtt caacaggatc ttcaattgta atgatttgca gttcatcttt
     1441 attttctata gaagaaacaa ggctatacat agaactggac ttaccactac ctgtgctacc
     1501 ggaaaaaaga aacaagcctg tttggttttt acactgttgt tgaatttgat tagtggatct
     1561 aggaaaaaca ctagatttta aaaatgggat agggtacttg taacgaaaaa ttcgaatgac
     1621 catgctttca tgaaaatctt tgctaggcat agtagaaagc cgtatagcaa ttttttctgt
     1681 gtttgtattt ttttcaaagc taccagattg aggtcgtctt ttttcgctta tatccaaagc
     1741 tgcttggaat ttaagaaaag atattaactt ttcccctaca tctattggaa ggtaaagaag
     1801 cggaatcaat gtcccgttta cccgaagacg gagtaagtaa cggtttgaga gtggatgaat
     1861 atgaacatca cttgcatgga cacgtaatgc ttgagttatg atgtgttctg tcattttttg
     1921 cggcataaga acctccttac aagtcatatt cctcaaaagt aaacaaaatc ctttgtgtcc
     1981 caatctttca caaaaacgaa aatagtattt tctaaatgca aaagtagcat ttcaagctaa
     2041 aataatattg aaagtggtat tttagaagca aataagtgaa taaaaaattt ttttcgattt
     2101 tgatgatttt cacaatctat gtgcaatgaa taacaagcgt ataattaaac ggtaatatcg
     2161 caataaagcc cttacattcc gaaccaatat caaaaataaa gaaaatttaa gctttaaaac
     2221 taattatttg ccgaacaata caactcatga taagctatag aaaaggcaaa tacataatag
     2281 aattagcggg tgaatgtaag cagagagact gcgaaaagcg gcgccgacgg ggaaagcatg
     2341 tattatgtga aactctcagg caaaaggatg tttacgggac gcaactctgg agtcattttt
     2401 gtgttacgac agggcttatg aaccatataa gcctttttgt tatgtgaaaa aggaggatat
     2461 aattatgaca gagttactaa aaacaccgat tcatccactt tatgcaaaat atggtgcgaa
     2521 aaccattgat tttggtggat gggatttacc ggtacaattt gctggtataa aagcagaaca
     2581 tgaggccgtg cgaactgatg cagggctatt tgatgtgtct cacatgggag aaattctagt
     2641 aaaaggaccg gatagtactt cttatttaca gtatttgtta accaatgaca ttgaaaaaat
     2701 aaaaatcgga aaagcacaat ataatattat gtgctatgaa actggtggaa cagtggacga
     2761 tttagtagtt tacaagaaat cagaaacgga atacatactt gttgtcaatg cagcaaatac
     2821 ggacaaggat tttgaatgga tggttaaaaa tattcgcggg gatgtttctg ttaccaatgt
     2881 atcttcggaa tatggacaat tagcacttca agggccaagc gcagaaaaaa ttctcgcaaa
     2941 actaacggat gtagatttaa gttcgattag cttctttgga tttgtggagg atgcggatgt
     3001 agcaggagtg aaaacaatca tttcaagaag tggctatact ggagaagatg gatttgaaat
     3061 ttatatgcca agcgctgatg caggaaaagt ttttgaggca attttagctg aaggagtagc
     3121 tccaattggt ttaggtgcac gggatacatt gcgcttagag gcggtacttg cgctttatgg
     3181 gcaagaattg agcaaggaca ttacaccact tgaagcaggg cttaattttg ctgttaaatt
     3241 aaaaaaagaa gcagatttta taggtaaaga agcgcttatt aaacaaaaag aagcagggct
     3301 gaatagaaaa ctagttggta ttgaattaat tgaacgaggt attccgcgtc acgattatcc
     3361 agtatttcta aatgaggaag aaattggcat tgtgacttct ggtacccaat cacccacact
     3421 tggaacaaat attggtcttg ctctaattga tacagcttac acagaaatag gtcaagaagt
     3481 agaagtaggt ataagaaaca aaaaaataaa agcgaaaata gtaccaacac cattttataa
     3541 acgcgcaaag taaaaaggag gaagtaatat ggcaaaacat cgttatttac caatgacaga
     3601 gcaagatgaa aaggaaatgc ttgatgtaat aggggttaag tcaattgatg acttatttca
     3661 agatattcca gaaaaaatta gatttaaacg agattatgat ttaaaaccag caaaatctga
     3721 acctgcactt ttacgcgaat tatcgaaact tgcttctaaa aatgctaata ctactgaata
     3781 tgcgtctttt ttaggggctg gagtttatag tcattacatt ccaactgtag tcgatcatgt
     3841 tatttctcgc tcagaatttt atacagcata tacgccttat caacctgaaa tttctcaagg
     3901 agagttgcag gcaatctttg aattccaaac gatgattgcg gaacttactg gaatggactt
     3961 ggctaattcc tctatgtatg atggtggaac agcgcttgca gaagcagcga tgctagcaag
     4021 tggacataca aagcgcaaaa aaattctcat ttccggagct gttcacccgg aaagtagcaa
     4081 tgttttaaaa acctatgcaa ctggccaaca cattgaagta gaagttattc cagaactaga
     4141 tggaaaaaca gacattgagg cgctaaaaaa agctctttca gatgatattg cgggttttgt
     4201 tgtacaatat ccaaacttct atggacaagt ggaacctttg gctgaacttg aaaaattagt
     4261 gcatgaaaat aattctttat tacttgtatc gagcaatccg ttgtctctag gtttgttaac
     4321 accaccagga gaatttggtg cagatattgt tgtgggtgat tcgcaagtat ttggtatccc
     4381 agaatcattt ggtggaccgc attgtggatt ctttgcagta acaaataaat taatgcgtaa
     4441 agttcctgga cgtttagttg gggaaaccgt agacgagaac gggaagcgcg ggtatgtact
     4501 aacattacaa gcacgcgaac aacatattcg ccgtgataaa gcgacgtcta atatttgttc
     4561 caatcaagca ttgaatgcat tagcttcttc tgtcgcaatg gcaacccttg gaaaaacagg
     4621 tcttgtagaa atggcaaaac aaaacttaga taaatctcat tatgccaaac aaaaattccg
     4681 tgaaaaaggc tttgaagttc tattttcaga tggctttttc aatgaatttg ttgtaaaact
     4741 ttcgaaacca atcaaagaag tgaatgaatc acttttagat gaagggatta ttggtgggta
     4801 tgaccttggt ttttatgagg aaaaatatga aaaccatatg cttgtagctg ttactgaaat
     4861 gcggacaaaa gaggaaattg atgcctttgt ggcgagcttg gagggtgcaa aatgaattta
     4921 gaagaaacga tgccattagt gtttgaacgt tctattccag gaagaattgg ctttagttta
     4981 ccagaaagcg atgttccaga aacaaaagcc agtgattatt ttgaacaagc gtatattcgt
     5041 tctgtaccag cagatttgcc tgaattaagc gagcttgaaa tcatgcgtca ttataccaat
     5101 ttatccaatc ataactttgg tgttgattct ggtttttatc cgcttggctc ttgtacgatg
     5161 aaatataacc caaaaatcaa tgaaaaagtt gcacgctttc ctggtttcgc taatatccat
     5221 ccaaaccaac cagaaagctc tgtccaaggc gcgctagaac tactgtatga tttgcaaaca
     5281 agcttagttg aaattacagg aatggatgaa gtaacgctac aaccagctgc tggagcacac
     5341 ggagaatgga cgggattaat gctcattcgt gcattccatg aaaagaatgg ggatacaaaa
     5401 cgcacaaaag taatcatccc agactctgca catggaacaa accctgcatc tgcagcagta
     5461 gcgggcttcg atgttgtgac ggtgaaatcg aatgaaaaag gacttgtcga tgtagctgat
     5521 ttgaaaaaag tagtaggcga agacacggcc gcactaatgc tcacaaaccc aaatacactt
     5581 ggtctttttg aaaaagatat tgttgaaatg gcggaaattg ttcatgaagc tggcgggaaa
     5641 ttgtactatg atggtgccaa tttaaatgct attatggcga aagttagacc aggagacatg
     5701 ggctttgatg ttgttcattt gaatttacac aaaacattta ctggtcctca cggtggtggc
     5761 ggtcctggtt ctggcccaat tggcgtgaaa aaggaattaa taccattctt accaacacca
     5821 gtccttacga aaaaagaaga aggatacacg tttgattata actatcctga ctctattgga
     5881 cgagtgaaac cttattatgg caacttcggc atcaatgttc gcgcgtatac gtatattcgc
     5941 acaatgggtc cggatggctt gaaattggtg acagaatatg ccgttttaaa tgccaactat
     6001 atgatgcgta aactgcaaga agcctatgat ttaccatttg atcaagtttg taaacacgaa
     6061 tttgttttaa gtggtaatag acagaagaaa cttggcgtaa gaactgttga tattgcgaaa
     6121 cgattgctag atcacaattt ccatccgcca acagtttatt ttccgctaat tgttggtgaa
     6181 gcaatcatga ttgaaccgac tgaaacagaa tcgaaagaaa ctctagattc tttcattgat
     6241 acgatgttaa aaattgcgaa agaagcggaa gaaaatcctg aaatcgtcca agaagcgcca
     6301 catagcacct atgtgaaacg actagacgaa acacgcgctg ctagaaaacc gattttacgt
     6361 tatcaaaaag aagtataaaa agaagccttg ttgcgaaact tcgcagcaag gctttttctt
     6421 atttagattt agtttttcct gtccatttac ggtagccgcc tttaagctga taaacttgtt
     6481 tgtatccgcg tttataaagc ataattgctg cacggttact acgttgtgct gtttggcagt
     6541 ataagtaaac tggtaaatct tgacgaattt ctgttgtccg gtttttcatt tgtgtaactg
     6601 ggatatttct agctccaaga atatgtccag catcgaattc atttggctcg cgaacatcaa
     6661 ttaactgtgc tttacgataa ccttttttaa attcttcttc tgttaaaact tttactgctt
     6721 tgcgacgcat tacaaactgg taaatttcgt atcctagaag aataaccaga atgataattg
     6781 ctataatcca actaatcaat tgtgtaaacc cctttcatcc tgaaaactgc tttttttaaa
     6841 gcatcctttt ctattataac ttattttttg ccaccatcaa tcactttgaa agaagatttt
     6901 cgttttttct tcgttttttt cttcggatca tgtaaatttt tcgattgttt tactgctttt
     6961 tggtaattac tgtcagtttt tctatttgtg aaaaaccgca gtagaagggt gaaaataagt
     7021 gccccgatta atacggaaat aattaaggtg aaaaatgatt taaaaccacc cattaaaagc
     7081 ccaataccaa caagcgcaag taaaataata actatgaggg gatacttctt caaattaatc
     7141 cactcctatt ctaaaagttc cagattctcc ggttccgcta catctactgg tgcaccttct
     7201 ttttccactc gtaaaagctc attaaaggat gcaatggcaa cctcaacttg atcatcagac
     7261 ggttcttttg ttgtaagaag ttgtagccat aaacccggga cacctaaata tttaagaact
     7321 gggatattac ggcatttatt agttaattga agtacttcaa aagctacacc aagtacgaca
     7381 ggaataagta aaatccggtc gaccacacga agccaaagag gatcagttgg tactaacaaa
     7441 taaataaaca taccaacaat aactgtaaat aaaataaaac tactacca
//
LOCUS       DASDYK010000114         7423 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.114, whole genome shotgun sequence.
ACCESSION   DASDYK010000114 DASDYK010000000
VERSION     DASDYK010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7423
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.114"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1627
                     /gene="virA"
                     /locus_tag="U0308_002442"
     CDS             <1..1627
                     /gene="virA"
                     /locus_tag="U0308_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease VirA"
                     /protein_id="HEM2317399.1"
                     /translation="FGVLIGIFSSKLFAMVLFWIVGLAIDAEFIISFKAIIDTILVFF
                     GIMLFTSVYAVFLVLRYNLNQLFKNDDKEEKVAKGSLIFMLIGLALITFGYYLATRNI
                     EESPIWLAYDFFDLILVILACVILGTWLMVRFGTPYVIRQLYNNKRFFYKGTNMLGIT
                     SLRFRLKKNAGTIAMIAVLSATTLTIIGSMSSFYVRTINDISAENPSSYQVLNISAKN
                     EKEIIQTIRDDQDHKLKKLMQAEMLSAEVEYKDIPKYKMHMDTFIHTIVSESEYNRIG
                     ERQQSDFVESKKIAYGDAILLGKNTYYARSDIQEKWLTRKMVVQSNKSVAKKMPPIKV
                     VDFRENSIFNTGISYETLVVSDEYYDDLERLFPPESVTMFDITNPNHSESLDKKVQTI
                     VDGEPSLFSENVSSYYTNYHLISTVVGSLLFIGIFIGIVFFLATGSIIYFKLVTDAVS
                     EKAKFDILFKLGVTEKEIRKIISKQVWPIFVIPLFFGIAHSMAALWGISVNLMDNIKY
                     PVLIGTGIYILCYAAYYFLCINSFTKIVMANKK"
     gene            1690..2367
                     /gene="virR"
                     /locus_tag="U0308_002443"
     CDS             1690..2367
                     /gene="virR"
                     /locus_tag="U0308_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator VirR"
                     /protein_id="HEM2317400.1"
                     /translation="MVKVYIVEDDEVIRDTIRKHLSKWGFEIGVVEDFNNILQEFLAF
                     EPQLVILDVNLPFFDGFYWCNQIREVSNVPIIFLSSRNSRMDQIMGMNMGADYYIEKP
                     VDLDVLMARINALLRRTYSYADLEEANVMEHNNVFLHIDTNTLTHLEDKIELTKNEFL
                     ILYELMKQKGSIVSRDEIMRALWEDESFVDDNTLTVNVVRIRKKLAEIGLSEFIKTKK
                     GQGYMIE"
     gene            2437..3312
                     /locus_tag="U0308_002444"
     CDS             2437..3312
                     /locus_tag="U0308_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2317401.1"
                     /translation="MKILVFGGTRFFGKKLVERLVSEGHEVTIGTRGKTEDNFGDTVK
                     RVILNRESRDALFQLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVYS
                     QKGRALVEADFNPEHYEIVIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGL
                     DDYTKRLHFHINHIKNHQEIGISNGQAEIGFITSDEAAHFLEWVGVESDLTGPVNATS
                     NGTYALNGFIKMLEEKIGKLALVEEVTDDVDDSPFGIEKTYYLDNTKATEAGFVFNDL
                     KVWLPALVTAILKEN"
     gene            3333..3791
                     /locus_tag="U0308_002445"
     CDS             3333..3791
                     /locus_tag="U0308_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317402.1"
                     /translation="MLNFEEKKALIESIDGFELHEISMGRINVHYPASKRDKKIIVKH
                     LHPNGNAFVYAPFLEVEPLDKQGYVNVKDYSENEIRVLLLEAKEFMDSDEDGYKEGLT
                     KIYQDNSGEKLSLVYENKMWVIFTGENLEAVFPTLESAEGYLLDEGFFEA"
     gene            3808..5550
                     /gene="ade"
                     /locus_tag="U0308_002446"
     CDS             3808..5550
                     /gene="ade"
                     /locus_tag="U0308_002446"
                     /EC_number="3.5.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine deaminase"
                     /protein_id="HEM2317403.1"
                     /translation="MVENLEQLQERVAVSDGRAKADLVIKNGRIINVFSGEIMDGDIA
                     IKNGYIAGIGNFPDAEKIIDAAGAFIAPGFIDAHVHVESAMVTPAEFARVLLPNGVTT
                     IVTDPHEIANVAGEKGIEFMLEDAKGVPIDMFVMLPSSVPATEGEHNGETLHAEKLHP
                     LYRHEKVIGLAEVMDFPSVAKGSSDILTKIIDAKKEGGRIDGHGAGLTSADLNNYLAV
                     GIRTDHESTTAKEATDRLRAGMFVMLREGTVGRDLLQTIPAVSEKNSHRFCFCTDDKL
                     INDLITEGSINYNIRLAIKNGIDPITAIQMATINAANCHNLPYLGAVAAGYQADIVFL
                     TDIETVEISKVLKNGEVVVDNGVRHEAAFKQQAAVPFVSPPINHHVSLQDLALPLTKE
                     TCYVIGMQPNSLFTEKRIEQVAIQDGKFVPTVENDLLKMAVVERHHDTGCVGLGIVKG
                     FGLTEGAIATTVAHDSHNIVAVGISDEAMKAAIDHITQTGGGIAVVNGAGQVLHDLAL
                     PIAGLLSDKSYEEVENDLAGLLNAFKQISTADGFDPFLTLSFLTLPVIPELKLTDQGL
                     FDFATFQIISNEVN"
     gene            5572..6612
                     /locus_tag="U0308_002447"
     CDS             5572..6612
                     /locus_tag="U0308_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM2317404.1"
                     /translation="MNWWSYIKDKRFFLLFFCSIMFFVGVLISIDPNSKLTLGNFIYL
                     YVFVLVFLLSYLVLGYFFKYNYWREMKELVSGEIEENIIELLPKPRTREQAFFNQLMA
                     KKHKEELRTISKLQDKQQEYHDFILYWVHEVKTPVVASKMLINNPDLNDTETIFKQID
                     EELTTIDKLVMQALYFSRLDTFSKDYFIQEQNLGVVVRESVKRHSKLFIGKKMKLDLQ
                     NVDMDVRTDSKWLGFILDQILSNALKYTKSSGEVKIWCDTEASEKKVLHIKDNGRGIK
                     EEDLPRVFEQGFTGNIGRQEKKATGMGLYLAKQMAKKLGHEICIQSESGVGTEVKIYF
                     EQKDDYLLIAKD"
     misc_binding    6712..6952
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            7010..>7423
                     /locus_tag="U0308_002448"
     CDS             7010..>7423
                     /locus_tag="U0308_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465265.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEM2317405.1"
                     /translation="MDYITEILPALLDGAKTTLLVFAVTLVCSIPLGAVVAVGNISKI
                     APLKFILNIYIWIMRGTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEI
                     FRGGFLSIENGQYESAKVLGLTYGQTLQKIVLPQVV"
BASE COUNT         2415 a         1105 c         1568 g         2335 t
ORIGIN      
        1 ttttggcgtt ttaattggaa ttttctcttc taaattgttt gcaatggtct tattttggat
       61 tgtcggcctt gcgattgatg cagagtttat tatttcattt aaagcgatta tcgatacgat
      121 actggtcttt tttggtatta tgcttttcac atcggtttat gcagtttttc ttgtattacg
      181 ttataatttg aatcagctat tcaaaaatga tgacaaagaa gaaaaagtag ctaaaggttc
      241 actaattttt atgttaattg ggttagcttt aatcactttt ggatactatc tggcaacgag
      301 gaatattgaa gaatcgccta tttggctagc ctatgatttt tttgatttaa ttttagtgat
      361 actggcttgc gttattttag gaacctggct gatggttaga tttggcaccc cttatgtcat
      421 tcgacaacta tacaataata aacgtttctt ttataaaggg acgaatatgc tagggattac
      481 atcgcttcgt tttaggctaa agaaaaatgc tggtacgatt gcgatgattg ctgttcttag
      541 tgcgacaacg ttaacgatta tcggctccat gagtagtttt tatgtgcgta caattaatga
      601 tatttcagcg gagaatcctt ccagttatca agtgctcaat atttctgcta aaaatgaaaa
      661 agagattatt caaacgattc gcgatgatca agatcataaa ttgaaaaaat tgatgcaagc
      721 agagatgctt agtgctgaag tggaatataa agatattcct aaatataaaa tgcatatgga
      781 tacattcatt cataccattg tatcggaatc agaatataat cgtatcggtg aaaggcagca
      841 gagtgatttt gtcgaatcta aaaaaattgc ctatggtgat gcaatcttac ttggaaaaaa
      901 tacttattac gcaagatcgg acattcaaga aaaatggctt actcgtaaaa tggtcgtcca
      961 atcaaataaa tcagttgcaa agaaaatgcc accaataaaa gtagtggatt ttcgagaaaa
     1021 ttcaattttc aatacaggga tttcttatga aacgctggtt gtttccgatg aatattatga
     1081 tgatttggag cgacttttcc ctcctgaatc tgtgacaatg tttgatatta ctaatccgaa
     1141 tcatagtgaa agcttggata agaaagtgca aacaatcgtt gacggggagc cttcattatt
     1201 ctcggaaaat gtttcttctt attatacgaa ttaccactta atctccacag tggtaggttc
     1261 actattattt ataggtattt ttattggtat tgttttcttt ttagcaacgg gaagtatcat
     1321 ttacttcaaa ttagttacag atgcagtttc tgaaaaagcc aagtttgata ttttatttaa
     1381 attaggagtt acggaaaaag aaatccggaa aattatttcc aagcaggttt ggccaatttt
     1441 tgttattcca ttattttttg gaattgcgca ttccatggct gcactgtggg gtatttctgt
     1501 taatttaatg gataatataa aatatccggt attaattggt acaggtattt atattctttg
     1561 ttatgcagct tattactttt tgtgtatcaa ttcttttacc aaaattgtga tggccaataa
     1621 aaagtaattg gcttttgtgg ttatttcagc taaaatgaga agagagttcc accgagggag
     1681 gcactagaaa tggtaaaggt atatatcgta gaagatgatg aagtaattcg tgatacaatc
     1741 cgaaaacatt taagtaaatg gggatttgag attggtgtag tagaggattt taacaatatt
     1801 ttacaagagt ttttagcttt cgaacctcaa ttagttattt tagatgttaa tcttcctttc
     1861 tttgatggct tttattggtg taatcaaatt cgagaagttt cgaatgtacc cattatcttt
     1921 ttatcatcac gtaattcgcg aatggaccaa ataatgggca tgaatatggg tgcagactat
     1981 tatattgaaa aaccagttga tctggatgtt ttaatggcgc ggataaatgc tctattaagg
     2041 cggacatatt cttacgcaga tttagaagaa gccaatgtga tggagcataa taatgttttc
     2101 ctacacattg atacgaacac acttacacat ttagaagata aaattgagct aacgaaaaat
     2161 gaatttttga ttttatatga attaatgaaa caaaaaggta gcattgtaag tcgtgatgaa
     2221 attatgcgcg cactttggga agatgaaagt tttgttgatg ataatacatt gacagttaat
     2281 gttgttcgta ttcgtaaaaa actagcagaa attggtttga gcgaatttat caaaacgaaa
     2341 aaaggccaag gatatatgat tgaatgacga aaaaacagga agatagcgct aaaaaacgcg
     2401 aacttcctgt ttttcgtaaa tggaggagga gtctaaatga aaattttagt attcggtggt
     2461 actcgttttt ttggcaagaa attagtggaa agacttgttt cagaaggaca tgaggtcacc
     2521 attgggacaa ggggcaaaac agaagataat tttggtgata ctgtcaaacg ggttatttta
     2581 aatcgagaat caagagatgc tttattccaa ttagcaaaag aagactggga tgttatttac
     2641 gataatatat gtttctctcc gaaagaagca ctttatgccg tagatgcatt taaaggcaag
     2701 gtaaaacgat acatatatac atcatcactc tctgtttata gtcaaaaagg tcgagcttta
     2761 gttgaagctg actttaatcc agagcattat gaaattgtta ttggagataa agaagatttt
     2821 gattacggtg aagggaaacg acttgctgaa gccgtatttt tccaaaaagc ttcttttcca
     2881 gtagttgcag ttcgttttcc aatcgtgctt ggacttgacg attacacaaa acgccttcac
     2941 tttcatatta atcatattaa aaaccaccaa gaaattggga ttagtaatgg acaagctgag
     3001 attggcttta ttacttctga tgaagcggcg cattttttag agtgggttgg tgtggaatcg
     3061 gatctgacag gaccggtaaa cgctacctcc aatggcacat acgcattaaa tggtttcatc
     3121 aaaatgcttg aagaaaaaat cgggaaatta gcactagttg aagaggtgac ggatgacgtc
     3181 gatgattctc cgtttggcat tgaaaaaacc tattatttag ataatacgaa agctaccgaa
     3241 gctggttttg tgtttaatga tttaaaagta tggttaccag ctttagtgac agctatttta
     3301 aaagaaaatt aatttggggg aaaaataata ctatgttaaa ctttgaagaa aaaaaagcat
     3361 taatagaatc tatcgacggc tttgaattac acgaaatttc tatgggccgt attaatgtac
     3421 actatccagc aagtaaaaga gacaagaaaa tcatcgtcaa acatcttcat ccaaacggta
     3481 atgcttttgt ttatgcacca tttctagagg tagagccact cgacaaacaa ggctatgtga
     3541 atgtaaaaga ttactctgaa aatgaaatcc gcgtattact attagaagca aaagaattca
     3601 tggatagtga cgaggatggc tataaagaag gtctaactaa aatatatcaa gacaatagtg
     3661 gcgaaaaact ttcactagtg tatgaaaata aaatgtgggt tatttttacg ggggagaact
     3721 tggaagcagt tttcccaacc cttgaaagcg cagaaggtta tttgcttgat gaaggttttt
     3781 ttgaagctta attgacggag gcgagttttg gtggagaatt tagaacagct gcaagaacga
     3841 gttgcagtaa gtgatggacg agcaaaagca gatttagtaa taaaaaatgg acgaataata
     3901 aatgtgtttt caggagaaat aatggacgga gatattgcca tcaaaaatgg ttatattgct
     3961 ggtattggca attttccaga tgcagaaaag ataatagatg ctgctggtgc cttcattgca
     4021 cctggtttta ttgatgcaca tgtccacgtg gagagtgcga tggtcacacc tgctgagttt
     4081 gcccgtgtct tactcccaaa tggtgttaca acgattgtta cagacccgca tgaaattgcc
     4141 aatgtggctg gagaaaaagg aattgaattc atgctagaag atgccaaagg agtaccaata
     4201 gacatgtttg tcatgctccc atcttctgtt cctgcaacgg aaggcgaaca taatggcgaa
     4261 acattacatg ctgagaaact ccatccgctt tatagacatg aaaaagtaat cggccttgca
     4321 gaagtgatgg attttccatc tgtagcaaaa ggaagttcgg atattttaac caaaattatc
     4381 gatgctaaaa aagaaggcgg acgaattgat ggacatggag ctggcttaac gagcgctgat
     4441 ttgaataatt atttggctgt tggtattcgg acagatcatg aaagtactac tgctaaggaa
     4501 gcaacagacc gcttacgtgc cggaatgttt gttatgctac gcgagggaac tgtaggccgt
     4561 gatttacttc aaacaattcc tgcagtatct gaaaaaaata gccatcgttt ttgcttttgc
     4621 acagatgata aactaattaa tgatttaatt acggaaggat caattaacta taacattaga
     4681 ctggctatca aaaacggaat agacccaatt accgctatcc aaatggcaac tattaatgca
     4741 gctaattgtc ataatttgcc ataccttggt gcagttgctg caggatacca agcagatatt
     4801 gtttttctaa cagatataga aacagtagaa attagcaaag ttttgaaaaa tggagaagta
     4861 gtcgtggata atggtgttcg tcacgaagct gcatttaagc aacaagcggc agtaccattt
     4921 gtatctccac caattaatca tcatgtgagt ttacaagatt tagcattacc tttgaccaaa
     4981 gaaacgtgtt atgtaatcgg gatgcaaccc aatagtttat ttacagaaaa acgtatcgaa
     5041 caagtggcta ttcaagacgg taagtttgtt ccaaccgtgg aaaacgattt actcaaaatg
     5101 gcagttgtag agcgtcacca tgatactggt tgtgttggat taggcattgt aaaaggcttt
     5161 ggtttaacag aaggcgcaat tgctacgact gtcgcgcacg attctcataa tattgttgct
     5221 gttggcatta gtgatgaagc aatgaaagcg gctattgatc atattactca aacaggtggc
     5281 ggtattgctg tagtaaatgg agctggtcag gtacttcatg atttagccct tccaatcgct
     5341 ggattgctta gtgataaatc atacgaagaa gtggaaaacg atttagcggg tcttttaaat
     5401 gcctttaaac agattagtac ggctgatggt tttgatccat ttttaacatt gtcattctta
     5461 acattaccag tgattccaga attaaaatta accgatcaag ggttgtttga ttttgctacg
     5521 tttcaaatta tttcaaatga agtaaactaa ttagtagcga ggaggtgcgc catgaattgg
     5581 tggagttata taaaagataa gcgatttttc ttattgtttt tttgtagtat tatgtttttt
     5641 gtaggcgtgt tgatttcgat cgatccgaac agtaaattaa cgcttggaaa tttcatttac
     5701 ttgtatgttt ttgttttagt cttcttgctt tcctatctcg tgctgggcta tttctttaaa
     5761 tataattatt ggcgtgaaat gaaggaactt gttagcggag agattgaaga gaatatcatt
     5821 gaattactac caaaaccacg tactcgcgaa caagcctttt ttaatcaact aatggcaaaa
     5881 aaacataaag aagaattacg aactattagt aagctacaag ataaacagca agaatatcat
     5941 gattttattt tatattgggt gcatgaagtg aaaaccccgg ttgttgcaag taaaatgtta
     6001 attaacaatc ctgatttaaa tgatacagaa acgattttca aacaaatcga tgaagaatta
     6061 acaacaatag ataaattagt tatgcaggca ctttattttt cacgtctaga tactttctca
     6121 aaagactatt ttattcagga gcaaaatctt ggagtagtag tgcgcgaatc agtcaaacgg
     6181 cattctaaac ttttcattgg gaagaaaatg aagttggatt tgcaaaatgt ggacatggat
     6241 gtgcgtacgg atagcaagtg gcttggtttt attttggatc aaatcttgtc caatgcactc
     6301 aaatacacaa aaagcagtgg cgaagtaaaa atttggtgtg atacagaagc atctgagaag
     6361 aaagtgctac acataaaaga caatggacgt ggaattaagg aagaagattt gccacgtgtg
     6421 ttcgagcaag gtttcacggg taatattggt agacaagaga aaaaagctac gggtatgggt
     6481 ttatacctag ctaaacaaat ggcaaagaaa ctaggtcacg aaatttgtat tcaatctgaa
     6541 agcggcgtag gaacagaagt gaaaatctac tttgaacaga aagatgatta cttactgatt
     6601 gccaaagatt aataaaaagt ggtacaccaa ttatgattgg cgtatcactt tttttgtaaa
     6661 taaaatggtt gactctatcg ctttatcgtg gtagagtatt agcaagaaga agtaaaagcg
     6721 tcgaacagaa caagtagagc gtaattcttt aaaagagagt ccttggttgg tgtgaaagga
     6781 taaagatagc gttatcgaac acatctcgga gctggtttgc tgaagcataa gtgagtaggt
     6841 gaactcgggt taagcccgtt atagcttgtt agtctcgaac taacagaggt tggtactgcg
     6901 aagtatcagc aaattgaggt ggaaccacgt gaatattatt ctcgtcctct tggccaatta
     6961 gcgccaagtg cgacgggatt tttttatgtt aaaaaaggag cgaagaatga tggattatat
     7021 cacggagatt ttaccagcat tacttgatgg agcaaaaaca acactgctcg tttttgcagt
     7081 tacgttagtt tgttcgatac cactcggggc ggttgtggca gtcggaaata ttagcaaaat
     7141 agccccactt aaatttattt taaatattta catttggatt atgcgaggca cgccattact
     7201 tttacaatta atttttattt attatggctt accgattatc ggggttgttt ttgaccgaat
     7261 ggatgccgtt tttattgctt ttattttaaa ttatgcagct tattttgcag agattttccg
     7321 cgggggattt ctttccatcg aaaatgggca atatgagagc gccaaggttt taggtcttac
     7381 ttacggccag acactgcaga aaattgtctt accacaagtt gtc
//
LOCUS       DASDYK010000115         7338 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.115, whole genome shotgun sequence.
ACCESSION   DASDYK010000115 DASDYK010000000
VERSION     DASDYK010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7338
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.115"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            1..1826
                     /locus_tag="U0308_002449"
                     /pseudo
     CDS             1..1826
                     /locus_tag="U0308_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929206.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
     gene            1949..3307
                     /locus_tag="U0308_002450"
     CDS             1949..3307
                     /locus_tag="U0308_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HEM2317406.1"
                     /translation="MKKMLPESKVEAIRKEGFLNRAVEAYRFFYPTVSNVSNFKALND
                     LGITENHDFIIQLTTPDLNVLTQNSDTPYCLGTGNTENGPVVIELPQGAIVGVADDIN
                     FKFITNMGLTGDEQGKGAKYLYLPPNYDGDIPEGYIVRKPSSYRFLICLRAMVHQASD
                     YEKAFELLKKVKFYPLEEKDNNPTSTFHDFSHRKAISTPYYVEGKFDYWEVIKWALDN
                     DETDPEYYQMYGLLKAIGLAPNKEFNPDPDKKALLIEAAEKADKMMFVNSFNTDDPAA
                     IVWPGKNWEWAVYGENNDFYEKTYLNLPVRERWFYQATLETHMMFMHKVGFGSVYMLG
                     VKDKEGNYLDGGKSYTLKVPTPVPTSIFWSVTVYEMDTRSEIVTEQFMPALNSIKDTF
                     EVDADGNTTLYFGPNPPEDESLPWIQTVPDANWFTYFRIYGPTKPAFDSSWQLDDFEE
                     VK"
     gene            complement(3350..3943)
                     /locus_tag="U0308_002451"
     CDS             complement(3350..3943)
                     /locus_tag="U0308_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI family protein"
                     /protein_id="HEM2317407.1"
                     /translation="MAKTELNPKVDAFLSKPSTWQAEFKALREIAITFELEEEFKWGK
                     PCYAINGSNVFLIHGFKNYCALLFMKGALLRDPENILVQQTENVQAARQIRFTNLQEI
                     LDQKEFLKAYIQNAIEVEKAGLEVELKPREETPIPEELLAKFEEMPALQTAFEALTPG
                     RQKAYLLYFAAPKQSKTRVSRIEKYEATILDGLGLND"
     gene            complement(4080..4487)
                     /locus_tag="U0308_002452"
     CDS             complement(4080..4487)
                     /locus_tag="U0308_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/extradiol
                     dioxygenase family protein"
                     /protein_id="HEM2317408.1"
                     /translation="MTLNVYLNFRTQSRDAIAFYEEIFGTKCTDLMTYGEIESREEPI
                     EDSLKDLVMNASLVMDGVKVMFSDVPKSMPLTFGDNITLVIDTSDEIKLTKQFHQLAE
                     GGNIVMPLGKTFWSEKYGQVTDKFGVGWQLNLS"
     gene            4652..5251
                     /locus_tag="U0308_002453"
     CDS             4652..5251
                     /locus_tag="U0308_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM2317409.1"
                     /translation="MKKTLYLIRHGQTLFNQRKKIQGFCDAPLTELGIKQAKIAASYF
                     KENNITFDQAYSSTSERASDTLELITDKSYQRLKGLKEWNFGTFEGESEDLNPPLPYG
                     DFFAAYGGEREVDFRDRLVATMERIMSQDNHDTVLAVSHGAACAQFARYWEKTSKIGK
                     VTGLKNCCILKFEYENGRFTLVNFINHDFENGTHIESTK"
     gene            complement(5283..5543)
                     /locus_tag="U0308_002454"
     CDS             complement(5283..5543)
                     /locus_tag="U0308_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317410.1"
                     /translation="MNLDDLKNKVTESLPLENLGTLTEEATNKASELGEQASNVTENL
                     QNEATNLTENLQDKTSGLTENLQDTANELTGGFLDKIKNLFQ"
     gene            5667..7079
                     /gene="dbpA"
                     /locus_tag="U0308_002455"
     CDS             5667..7079
                     /gene="dbpA"
                     /locus_tag="U0308_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DbpA"
                     /protein_id="HEM2317411.1"
                     /translation="MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQ
                     TGSGKTAAFAIPIAEQIEWEENKPQALIIVPTRELAMQVKTECTNIGRFKRVKAAAIY
                     GQSPFAKQKLELSQKNHIVVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFID
                     QVEDILSRLPKQRQNLFFSATMPEEMQDLIKRYQDDPMVIEMASEKTNPIFHVEMQTD
                     NKEKTLKDVLITENPDSAIIFCNTKNQVDELTDLLDVKVSKIHGGLRQEDRFRAMDDF
                     KSGKSRFLIATDVAGRGIDVDNVSLVINYDLPIEKENYVHRIGRTGRAGKSGKAISFV
                     KTNENPLLRDIEEMLDVTIEKKRKPTVIEVKANEEAFRKKQQKRPTIKKARGEKLNKN
                     IMKLYFNGGKKKKIRAVDFVGTISKLEGITAEDIGIITIEDHVSFVEILNGKGPAVLE
                     MMRSRKVKGRRLKVNEARKR"
     gene            7104..>7338
                     /locus_tag="U0308_002456"
     CDS             7104..>7338
                     /locus_tag="U0308_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3116 family protein"
                     /protein_id="HEM2317412.1"
                     /translation="MERPDNQLILMVLEVVKNPLYNIKSLTINFLQGDIVGNSTRNEL
                     LYCTYWLEFHGFILRDEKGDNQKYYSMTKQGDFL"
BASE COUNT         2593 a         1240 c         1414 g         2091 t
ORIGIN      
        1 cttaaaacaa agatgccaaa actatcgaga attagtgcat taaatcaaac agttacttta
       61 gataaagcaa ttgtagtgga tgattccgat ttaattatta ataatgagat tagtaatttt
      121 ggaaagttaa ccgatccaag cccaatatca aattttggaa cttacgcaaa tgaaaaaata
      181 acttggtcgt ctgaaagaat taaaaattta acagaggtta gttttaagtt ttctgagcta
      241 attaatgtga ctggtataga tggaactttt tcaggaaaag taacacaacc atttaaaaaa
      301 tcaactacac cagtaattaa tgcagattcc gaaattcatt atccgcaagg gacaaaaaaa
      361 cagaagcaga gtttttaaag gatattcaag cgcaaacaac ggatgattta tccattaaaa
      421 gcgattttga aataatggtg aatctcaaga aagtaggaaa atacacagta atattaaacg
      481 tagagaatat ggatggaatt aaagctaatc caaaagaagt gactgtttat attgatgctg
      541 tacaaggtgc aaatataact gtgaaatatg aagacaaatc agggaataaa cttgcagaaa
      601 atagcatatt aactggaaat gtcggtgaag aatatagttc aagtgaaaaa gaaattttag
      661 gttatacact aactgaaatt ccaacaaatg cacaaggaga atttagttta gaagaacaga
      721 ctgtgacata tatctattcg aaaaatcccg ttccagctaa agacatcacg gtacaatata
      781 ccgataaaga tggaatagaa ctagcaccaa ccgaaacatt atcaggtaat gttgatgaaa
      841 attatgttac aacagcgaag aattttacag gatacgaatt aattgaaact ccgagcaatg
      901 cagaaggaaa gtttagcgaa aatgcacaaa cagtgaccta tgtgtatcgc gcgattaaag
      961 cagatccaat tttagcaaaa gaagttacgg tgaactacca ggacgaatta ggagctaaaa
     1021 ttagtgaaac ggaagtatta actggtgaaa ttggtgaaac atacacaaca gtggctaaaa
     1081 caatagatgg ctatacctta attaagagcc ctattaacgc tagcgggatt tttaacgaaa
     1141 atcctcaaac ggttacctat gtgtatcaat tacaaaacaa cccaataaca gcaaatatca
     1201 ctgttaaaca cttggatgaa aacaacaatg agctagcacc gagtgaggta ctaagtggaa
     1261 ttgtcgatga agcatataca actaatccaa aagaaataaa agactattcg ctagtaaaag
     1321 taccaactaa tgctagcgga aaattcacga cagaagcaca aacggtgatt tatcactata
     1381 aaaaaaacag tatacagaca tcatcttata ttactgtaaa atatgtagat gaaacaggga
     1441 aagagctggc cataagcgag gtattaaacg gaaacattaa tgattcctac gcaactacag
     1501 ctaaggaaat taaaggctac acgctagtgg aaaagcccgc taatgcaact ggtaaattta
     1561 cagatcagga tcaaactata aaatatgtat atcgtgctaa tacagatgaa gtaaatctag
     1621 acccagatgt accagcgaga aatcccaatg gagatattca accaatgaat ggtgcccaac
     1681 caccaattga ggttccaaaa tccctgccta aaacaggtag ccagccggca aatttgatct
     1741 ttggattagg agttttacta gtgtttctta gtacccaatg gctacatcga gataaaagaa
     1801 aaaaagataa atctcataac tgctgataac atttcttgac aaaactctcc ttatcctaag
     1861 gagagttttt tactttacgc ttgaacattc aaaaacaagg gtattagtta agtgttctaa
     1921 aaaaagctaa ttgaaggagg ttttttacat gaaaaaaatg ctacctgaga gtaaagtaga
     1981 ggcaattaga aaagaaggat ttttaaatcg agctgttgag gcatatcgat ttttctatcc
     2041 aactgtgtcc aatgtgtcta attttaaagc attgaatgac ttagggatta cagaaaatca
     2101 cgatttcatt attcaactca caacgcctga tttaaatgta ttgacgcaaa actcagatac
     2161 accatattgc cttggaacgg gaaacaccga gaatggtcca gttgttatcg agttgccaca
     2221 aggcgctatc gttggtgtgg ctgacgatat taattttaaa tttattacga atatgggatt
     2281 aacaggggac gagcaaggga aaggcgcgaa atatttgtac ttaccaccta attatgatgg
     2341 ggatatccca gaaggctaca tagtacgcaa accttcaagc tatcgtttcc tcatttgttt
     2401 acgagcgatg gttcaccaag caagtgatta tgaaaaagca tttgaactcc tgaaaaaagt
     2461 gaaattctat ccattagaag aaaaagataa taatccaacc agtacattcc atgatttttc
     2521 gcatcgaaaa gcgatttcga caccatatta tgtcgaagga aaatttgact attgggaagt
     2581 aattaaatgg gcgctggata atgatgaaac agatccagaa tattaccaaa tgtatggctt
     2641 actaaaagca attggtttag ctccaaataa agaatttaat cctgatccag ataaaaaagc
     2701 tttattaata gaagctgccg agaaagcaga caaaatgatg tttgtgaatt cctttaatac
     2761 agatgatcca gctgctattg tttggccagg aaagaactgg gaatgggctg tctatggtga
     2821 gaataatgac ttctatgaaa aaacgtattt aaatcttccg gtaagagagc gttggttcta
     2881 tcaagcgaca ctcgaaacac atatgatgtt tatgcataaa gtcggatttg gttccgttta
     2941 tatgcttgga gtgaaagata aagaaggaaa ctatctggat gggggcaaaa gttatacatt
     3001 aaaagtgcca acaccagtgc caacgagcat tttctggtcg gtaacggttt atgagatgga
     3061 tactcgttcg gaaattgtca cagagcaatt tatgcctgcg cttaactcca tcaaagatac
     3121 gtttgaagta gatgctgacg gtaatacaac actttacttt gggccaaatc ctccagaaga
     3181 tgagtcgctt ccatggattc aaactgttcc agatgccaat tggttcacgt atttccgtat
     3241 ttacggacca accaaaccag cctttgatag cagttggcaa ttagatgatt ttgaagaagt
     3301 aaaataaata aaaaagcgca accttcacgc agggtgcgct ttttttcgat taatcgttta
     3361 atcctaatcc atctaaaatc gttgcttcgt atttttcaat gcgcgaaaca cgcgtttttg
     3421 attgctttgg agccgcaaaa tagagcaagt aagctttttg acgaccagga gttaaggctt
     3481 caaaagctgt ttgtagcgca ggcatttctt caaatttagc gagtaattct tctggaatag
     3541 gcgtttcttc ccttggttta agttccactt ctaacccagc tttttctact tcaattgcat
     3601 tttgaatata cgcctttaga aattcttttt gatcaagaat ttcctgtaaa tttgtgaagc
     3661 ggatttgtct ggcagcttgc acattttctg tttgctgaac taaaatgttt tccggatcac
     3721 ggagtagtgc gcctttcata aagagtagtg cacagtagtt tttaaaacca tgaattaaga
     3781 aaacgttgct gccattaata gcgtaacaag gtttccccca tttgaattct tcttctagtt
     3841 caaacgtgat tgctatttct cttaatgctt tgaattcagc ttgccaagtg gatggtttac
     3901 ttagaaacgc atctacttta ggatttaatt cggtttttgc cataaagaat tcctcttttc
     3961 cacacttttt ctttgatacg tgttatttta acttaataag aaaggccttg caaatttggt
     4021 cggcctacta aaaatggact taaagaaaga acctgagttt tatcccagat tctcttaatt
     4081 taagataaat taagctgcca accgacgccg aatttatccg tcacttgccc atatttttcc
     4141 gaccagaatg ttttgccaag tggcatgaca atattgccac cttctgcaag ctgatggaat
     4201 tgtttggtta attttatttc gtcagatgta tcaattacta gtgttatatt gtctccgaat
     4261 gtgagcggca tagactttgg aacatctgaa aacataacct ttactccgtc cattactaaa
     4321 ctagcattca tcactaaatc tttgagcgaa tcttctatag gttcttctct ggactcgatt
     4381 tccccatatg tcatcaaatc tgtacacttt gttccaaaaa tttcttcata aaacgcgata
     4441 gcatctctgg attgtgttct aaaattcaag taaacattca acgtcatttg aattcctcct
     4501 cgatttttat tcgctaaagt tctattcatt ttggtgtttt tattatagca gatactgcgt
     4561 gaaagaggaa aaattaagaa gataaatact tgacttggag ctactccagg gtgataaact
     4621 aaggagaaga tatagattcg gaggaattta gatgaaaaag acattgtatt taatacgcca
     4681 tggtcaaaca ttatttaatc aacgtaaaaa aattcaaggt ttttgcgatg caccacttac
     4741 cgaactcggg attaaacaag caaaaatcgc tgctagttac tttaaagaaa acaatataac
     4801 attcgatcaa gcttacagtt ccacatcaga gcgcgcatct gacacgttag agctgattac
     4861 ggacaaaagc tatcaacggt tgaaaggttt gaaagaatgg aattttggta cttttgaagg
     4921 cgagagcgaa gacctaaatc caccgctacc atatggagat ttttttgctg cgtatggggg
     4981 agagcgagaa gtggatttca gagatcgttt agtagcaaca atggaacgta tcatgagcca
     5041 agataatcat gatactgtcc ttgccgtttc tcacggagct gcctgtgccc aatttgctag
     5101 atattgggaa aaaacaagca aaattggcaa agtaacagga ctgaagaatt gctgcatttt
     5161 aaagtttgaa tatgaaaatg gcagatttac tttagttaat tttattaatc atgattttga
     5221 gaatggaacg catatagaaa gcactaaata aaaaagcact cgtcattgag tgctttttcg
     5281 cttcattgaa acaaattctt tattttatcc aaaaatccac cagttaactc attcgcagta
     5341 tcttgcaagt tttccgtaag tccacttgtt ttatcttgta gattttctgt taggttcgtc
     5401 gcttcattct gtaaattttc tgtgacatta cttgcttgtt caccaagctc agatgctttg
     5461 tttgttgcct cttctgtcag tgttcctagg ttttccaggg gcagggactc ggtaacttta
     5521 ttcttcaaat catctaaatt catcttttcc tccttatttt gggggcttag agttcattct
     5581 aaaggaagga gggataaagt acaaacaatt cgttccatca tttgtgaaaa aatatggtat
     5641 gatgatatga ggaaatgagg actgacatga ataatttaaa attaagtgaa gaaattaaaa
     5701 gagcgattaa tgaactagga tatacagaag caacacccgt tcaaaaagcg gtaattccag
     5761 ttgccttaac aggagaagat attgttgcta aatcacaaac tggtagtggg aaaacagcag
     5821 cattcgctat tcccattgca gaacagattg aatgggaaga aaataagcca caagcactaa
     5881 tcatcgttcc aacacgagaa cttgcaatgc aagtcaagac agaatgtacg aatattggac
     5941 gatttaaacg tgtcaaagct gcagcaatat acggacaatc accatttgcg aaacaaaaat
     6001 tagaactaag ccaaaaaaat catatcgtcg ttgggacgcc tggtcgcctg ctggatcata
     6061 ttgaaaaagg atcactgaat gtcgacaagg ttgcccattt agttttagat gaagtagatg
     6121 aaatgttaag catgggattt attgatcaag tcgaagatat tcttagccgt ttaccaaaac
     6181 agcgccaaaa tctatttttc tcagcaacta tgccagaaga aatgcaagat ttgattaaac
     6241 gctaccaaga tgatccaatg gtaatcgaaa tggcatcgga aaaaacaaac cctatcttcc
     6301 acgtggagat gcaaacagat aataaagaaa aaacgctaaa agatgttttg attacagaaa
     6361 atccggatag cgcaataata ttttgcaata cgaaaaatca agtcgatgaa ctcaccgatt
     6421 tacttgatgt aaaagttagt aaaattcatg ggggtttaag acaagaagac cgtttccgag
     6481 caatggatga ttttaaaagt ggcaaatccc gtttcttaat tgcgacagat gtggcagggc
     6541 gcggaataga tgtggataat gtatcgttag tcattaacta cgatttacca attgaaaaag
     6601 aaaattatgt acatcgtatc ggtcgtactg gtcgcgctgg caaaagtggt aaagctatta
     6661 gtttcgtgaa aacaaatgaa aatccacttt tgcgtgacat agaagaaatg ctcgatgtta
     6721 caatcgaaaa aaaacgtaaa ccgacagtga tagaagtgaa agctaacgaa gaagctttcc
     6781 gcaaaaaaca acaaaagcgc ccaacaatca aaaaagctcg tggggaaaaa ttaaataaaa
     6841 acattatgaa actgtatttt aatggtggaa aaaagaaaaa aattcgtgca gtagattttg
     6901 ttggaactat ttctaaatta gaaggaatta cggccgaaga tatcggaatt attacgattg
     6961 aagaccatgt ttcttttgtt gaaattttaa atggaaaagg tccggcagta ctggaaatga
     7021 tgcgctctcg taaagtaaaa ggtagacgcc tgaaagtaaa cgaggccaga aaacgataaa
     7081 ttaaagaaaa gaaggtccaa acaatggaaa ggccagataa tcaacttatt ttaatggtgt
     7141 tagaagttgt taaaaatcca ctttacaata taaaatcact aacaattaat tttctgcaag
     7201 gtgacatcgt tgggaattca acaagaaatg agttgttata ctgcacttac tggcttgaat
     7261 ttcatggctt tattcttcgt gacgaaaaag gggataacca aaaatactat agcatgacca
     7321 aacaaggaga ttttctac
//
LOCUS       DASDYK010000116         7084 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.116, whole genome shotgun sequence.
ACCESSION   DASDYK010000116 DASDYK010000000
VERSION     DASDYK010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7084)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7084)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7084
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.116"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            130..1935
                     /locus_tag="U0308_002457"
     CDS             130..1935
                     /locus_tag="U0308_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HSP90 family protein"
                     /protein_id="HEM2317413.1"
                     /translation="MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAIRT
                     RKKIDSTLEGKIHASLTGDNNEKTLIVEDNGIGLTEDEVHAFLATIANSSKGEKNFDG
                     ESSNDFIGRFGIGLLSCFIVSDEIVMISTSKKDGGTTEWRGKADGTYSVRKIETETRE
                     PGTQVYLRLRADLDEHPECEDVEELINTLKKYGSSLESNIIVEINGLEEEINSWTKQF
                     SNKETLSKLSKDQIIQYGEYILGTRFQDYFLIENESGRTFGIAYMIPHAVQMNAIRKN
                     TVFLNNMYVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVADELGVA
                     LKKGIETLPEEALMKLLATHYLGFKALASEDAPFLKLIYPYLPVRTLNGEEKLGDIIA
                     KNDVIYYTYSVDDFRQIKDIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIEPE
                     EMTNKLRPMTVSEEQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPTIFIHSTATQEL
                     RELERAVEETNSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSGKTVKELSVI
                     VNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML"
     gene            1947..2915
                     /locus_tag="U0308_002458"
     CDS             1947..2915
                     /locus_tag="U0308_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317414.1"
                     /translation="MDYLNDLESVWGMDDTPEKIKVLERIIAGADLYNNIDDGIEARD
                     LLIDTCLTAGFPKKQLQAFSWLIKKWEDKDSDAYIDTEDLFWKYKWISEHVPTFDEVS
                     KAQIDGLLNDMKVKFEQENYSLRPYYKVCTLAAMRMGDVEKAKELFKKWSDTKADFLN
                     DCPACERNDQVHYYCFIKDYETAKKTAKPIIEGKQRCAEVPHLTYGNMALAYLALGDE
                     KMAQECFDKGYPLVEKQISLLPPLGQLLKYLVLTKQTEKAREVIDTNLETVLKAEGGL
                     DRLIFLQAAYPLFDREKEADLVEMTEALTAKFDARNGNSYYQDLLK"
     gene            3011..3757
                     /locus_tag="U0308_002459"
     CDS             3011..3757
                     /locus_tag="U0308_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEM2317415.1"
                     /translation="MTIWVKNEKNGATEQVIREKEIALGVTLPFEYKQLLSEQNGGLI
                     RKNHFKTTEPTSYGLDFGEIYYLASLDEILTDIPEQKDVDLAGKQVYFHRDESRYIGF
                     SYIDNTSEPSIIYVDFETLQTLIVAETFATFIEELYFSPFPTDFAEHFPIKKLNQILA
                     SSNVQKTKQLLELLEDYPDKKWYLATFLGLLEKQEIPYNLVVYRLFENQLLYFRRKLA
                     PELVEQIFVRLEACDGINKAALAELYKEWK"
     gene            3770..4228
                     /locus_tag="U0308_002460"
     CDS             3770..4228
                     /locus_tag="U0308_002460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEM2317416.1"
                     /translation="MLKVVFVCLGNICRSPMAEGLFRKEVAEAGLTNEIKIDSAATGT
                     WNLGKPPHRGTQAVLKKHGVDYQEMRARKISDVDFNEADFIIGMDQQNLADLNALNNN
                     PDVIVRSLMSFVPGQEDKDIPDPYYTGDFDETERMVTEGVKALLAYITKK"
     gene            4316..4477
                     /locus_tag="U0308_002461"
     CDS             4316..4477
                     /locus_tag="U0308_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HEM2317417.1"
                     /translation="MLGIIWGIIVVLLAVWLLGIIFHIAGGLINILLVIVLILVIWNL
                     IQMARNKRK"
     gene            complement(4527..5267)
                     /gene="nfsA"
                     /locus_tag="U0308_002462"
     CDS             complement(4527..5267)
                     /gene="nfsA"
                     /locus_tag="U0308_002462"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NADPH nitroreductase"
                     /protein_id="HEM2317418.1"
                     /translation="MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQ
                     AYSIIGITDKGVREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEEHQVDTTALET
                     SEKWLVSVIDAALAAQNMAVAAESLGLGICFIGGIRNDVEQISEILDLPPYTMPLFGL
                     TIGYPVANKEKAKPRLPQDLVYHENTYQKMNPTILTEYDEQIKNYYDERTAGKRVEGW
                     SEQIARGLGRPSRLDLKAFMEKQHLNQK"
     gene            complement(5280..5789)
                     /gene="trmL"
                     /locus_tag="U0308_002463"
     CDS             complement(5280..5789)
                     /gene="trmL"
                     /locus_tag="U0308_002463"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HEM2317419.1"
                     /translation="MPNHIVLYQPEIPANTGNISRTCAGTDTYLHLIRPLGFSTDDKM
                     LKRAGLDYWDNVKLSYYDSLDEFFEKNEGGEFYYITKFGRHVYSDIDYSDPNKDYFFV
                     FGKETTGLPDALLQKNEENCLRIPMTDHIRSLNLSNTAAILAYEALRQQNFGALLQEP
                     NYDRKIFQD"
     gene            complement(5810..6949)
                     /gene="queG"
                     /locus_tag="U0308_002464"
     CDS             complement(5810..6949)
                     /gene="queG"
                     /locus_tag="U0308_002464"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEM2317420.1"
                     /translation="MIVKSTSDYAALKEELIAYAHEIGIQKIGFTTADPFLFLKERLL
                     EAEALDLFTGFEHPVIDERVYPELIFKEPQSIIAIALAYPSKLKEAPISKKGARRGVF
                     ARASWGIDYHTVLREKLALLETFLSERLPDVRMKSMVDTGELSDVAVAERAGIGWRGK
                     NTLLITPEYGSWVYLGEMITNIPFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPK
                     ICLSYLTQTKDFLDEKYREVLHNRLYGCDTCQVVCPYNRGHDFHFHDEMEPDPELVRP
                     ELKPLLHISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDKTAVPDLIDCLQNDP
                     RPVIRGTAGWALRKIGGSDAEKAVEQALQTEQDEQVLQELTAITN"
BASE COUNT         2211 a         1244 c         1418 g         2211 t
ORIGIN      
        1 tgtggaaacc atcacaaagt atttaccact gatataaatt cttaaacatc tattattgtt
       61 ttctcattat ttatctcttc ttttatgata gaataaaaag gacttttgta caactaggag
      121 gaccaagcta tggaaaatta ttctcaccgc tttcaggtga acttggctgg tatgattgac
      181 attctctcaa accaccttta tgacgaaaaa gatgtttata ttcgcgaatt actgcaaaat
      241 gcaaccgatg ccattcgcac caggaaaaaa atcgattcaa ctttagaagg taaaatccat
      301 gcatctctaa ctggagataa taatgaaaaa acattaattg tagaagacaa cggaattggt
      361 ttaacggaag atgaggttca cgcttttcta gctactattg ctaattcatc aaaaggcgaa
      421 aaaaactttg atggagaaag ttccaatgac tttattggtc gttttgggat tggtttactt
      481 tcttgtttta ttgttagtga tgaaattgta atgatttcta cttccaaaaa agatggtggc
      541 acaacagaat ggcgcggaaa agcggacgga acttattcgg ttcggaaaat agaaacggaa
      601 actcgcgaac caggtacaca agtgtatttg cgcttacgag ctgatttaga cgagcaccct
      661 gaatgcgagg acgtagaaga attaatcaat acactcaaaa aatatggttc ctctttggaa
      721 agtaatataa tagtagaaat taatggttta gaagaagaaa ttaatagttg gaccaaacag
      781 ttttccaata aagaaacctt gtctaaacta tcaaaagatc aaattattca gtacggcgaa
      841 tatatccttg gaacgcgttt ccaagattat ttcttaattg aaaatgagtc aggaagaacg
      901 tttgggattg cttatatgat tcctcatgct gttcaaatga atgctatccg gaagaacacg
      961 gtatttttaa ataatatgta tgtcacaagt gaagcaaata atattttgcc tgattggtcg
     1021 ttttttgcta aatgcgtgat ttggacggat gagcttcaac ctgttgcttc tcgtgaggcg
     1081 ttttataaaa atgagcgatt aactagtgtt gccgacgagc ttggcgttgc tttgaaaaaa
     1141 ggaattgaaa ctcttccaga agaagcattg atgaaattat tagctacaca ttatcttggt
     1201 tttaaagcac ttgcgagtga agatgcacca tttttaaaat taatctatcc ttatcttcca
     1261 gttcggactt tgaatggcga ggaaaaatta ggtgatatta tcgctaaaaa tgatgtcatt
     1321 tattacacct actcggtcga tgactttaga caaattaagg atattgctag atcaagcggt
     1381 atgacgctta ttaacggcgg ctattcctat gattcgccaa tcttagcgca attaagttac
     1441 tttgttgagg ggacagaatt tgttttaatc gaaccggaag aaatgactaa taaattacgg
     1501 cctatgacag tgagcgaaga acaggcttac caacctattt tgacagaaat gaatagtatg
     1561 atggctgaat ttgatacaga tgtattaatt aaacattttg aaccgaaaga tttaccgact
     1621 attttcatcc actctacagc aacacaagaa ttacgcgaac tagaacgtgc tgtcgaagaa
     1681 acaaattctg tttttagtga tattttagag agcatccaaa aagaacaaga acctgcaccg
     1741 cttgctcact tgtatttaaa tttggataac gagctgatta aaagactttt cacttctgga
     1801 aaaacagtga aagaattgtc cgtaattgtg aatgtacttt atatccaagc cttactatta
     1861 gggcattatc cgcttaaacg gaaagaaatg gtattaatga atcaaaatat gttacgaatc
     1921 ttagagatgc tataggagga agaaaaatgg attatttgaa tgatttagaa tcagtttggg
     1981 gaatggatga cacgcctgaa aaaataaaag tattagaacg aattattgct ggtgcagatt
     2041 tgtataacaa tatagatgat ggcattgaag cacgtgatct gttgattgac acatgcttaa
     2101 cagctgggtt tccgaaaaag caattacagg cttttagctg gttaatcaaa aaatgggaag
     2161 acaaagatag tgatgcttac attgacacgg aagatctttt ttggaaatat aaatggatta
     2221 gtgaacatgt cccgactttt gatgaagtat cgaaagcgca aattgacgga cttttgaatg
     2281 atatgaaggt gaaattcgaa caagaaaatt attcgctaag accttattat aaagtgtgca
     2341 cgcttgcagc catgcgtatg ggcgatgttg aaaaagccaa agagctattt aaaaaatgga
     2401 gtgatacgaa agcagacttt ttaaatgact gtcctgcttg cgaaagaaat gatcaagtac
     2461 attattattg cttcattaaa gactatgaaa cagctaagaa aacagcaaaa ccgattattg
     2521 aaggaaaaca acgctgtgcg gaagttcctc atttaacgta tggaaatatg gcgcttgcat
     2581 atttagcgct tggagatgaa aaaatggcgc aagaatgctt tgataaaggt tatccccttg
     2641 tggagaaaca aatctcctta ctaccaccac ttgggcaatt acttaaatat ttagtcctta
     2701 ccaagcaaac ggaaaaagcg cgagaagtga ttgataccaa cttagaaact gttcttaaag
     2761 ctgagggtgg tttagaccga cttattttct tacaagcagc ctaccctctt ttcgaccgag
     2821 aaaaagaagc tgatttggta gaaatgacgg aagctttaac ggcgaagttt gatgcgcgga
     2881 atggaaatag ttattatcaa gatcttttga agtaaaattt tggaacatag ttaggaatta
     2941 tttctagcta tgttcttttg tttgcgctat tttgcttttt ttaggataat acagggagga
     3001 gttgaagagg atgacgattt gggttaaaaa cgaaaagaat ggcgcaactg aacaagtaat
     3061 tcgtgaaaaa gaaatagcgt taggcgtcac tttaccattt gaatacaaac agcttttatc
     3121 agagcaaaat ggtggattga ttcgcaaaaa tcattttaag acgacggaac cgacttctta
     3181 tggactagat tttggtgaaa tctattatct ggctagtttg gatgaaattt taacggatat
     3241 tccggaacaa aaggatgttg atctcgcagg gaagcaagtt tatttccacc gggatgaatc
     3301 gcgctatatt ggtttttctt atatagataa tacgtccgaa cccagtatta tttatgttga
     3361 ttttgaaacg ttacaaacac ttattgttgc tgaaacgttt gctacattta tagaggaatt
     3421 gtactttagt ccctttccta ccgatttcgc ggaacatttt cccataaaaa aattaaatca
     3481 aattctcgct tccagcaatg tgcaaaaaac aaaacaatta ctggaactat tagaagatta
     3541 tccagataaa aagtggtatt tagcgacatt tttaggatta cttgaaaaac aagaaatccc
     3601 gtataattta gttgtctatc gtttgtttga aaatcaattg ctttatttcc ggagaaaact
     3661 cgcgcctgaa cttgtggagc aaattttcgt ccgactggaa gcatgtgatg ggataaataa
     3721 agcggctctg gccgaattat ataaggaatg gaaataagga ggaattcaat tgttaaaagt
     3781 agtttttgtc tgtttaggga atatttgtcg ttcaccaatg gctgaggggt tatttcggaa
     3841 agaagttgca gaagctgggt taacgaatga aataaaaatt gattctgctg caactggtac
     3901 ttggaattta gggaaaccgc cacaccgcgg gacgcaagca gtgttgaaaa agcatggtgt
     3961 tgattatcaa gagatgcgag ctcgaaaaat ttctgatgtt gattttaacg aagctgattt
     4021 tattatcggg atggatcagc aaaatttagc agatttaaat gcacttaata ataatccaga
     4081 tgtcatcgtt cgctcgctta tgtcctttgt gcctggtcaa gaggataaag atattccaga
     4141 cccatattat acaggggatt ttgatgaaac cgaacgcatg gtaactgagg gagtaaaggc
     4201 ccttttagct tatatcacaa aaaaatagtc tgtttttagc cctaatatgt ttaaagactg
     4261 acctcacggg aatatataag agtacaatca aaagtgcaga aagaggtttt tatacatgtt
     4321 aggaattatt tggggaatca tcgtagtttt attagcagtg tggttacttg gaattatttt
     4381 ccatattgcg ggtggattaa ttaatatctt gttagtaatc gttttaatac tcgttatttg
     4441 gaacttaatt caaatggcta gaaataaacg gaaataaccg aaaaagaacg gtacggcgca
     4501 ttaagataat gcgccgtacc gttcttttat ttttgattta aatgttgttt ttccataaat
     4561 gcttttaagt ctagccggct tggtcttcca agcccacgcg caatttgttc ggaccaacct
     4621 tctactcgtt ttcctgctgt tctttcgtcg tagtaatttt ttatttgttc atcatattca
     4681 gttagaatag ttgggttcat tttttggtag gtgttttcgt ggtataccaa atcttgaggc
     4741 aatctcggtt tcgctttttc tttgttagca accggataac caattgtcaa gccgaataat
     4801 ggcatcgtat atggtggtaa atcaagtatt tccgagattt gttcgacatc gttacgaatc
     4861 ccgccaataa agcaaatgcc aagtcctaat gattctgcgg caacggccat attttgtgca
     4921 gcaagtgcgg catcaatcac agaaacaagc catttttctg acgtttccag tgcagttgta
     4981 tccacttgat gttcttctaa gatggcgtga tgacgagcta aatcagcaac gaaaataaat
     5041 agttgaccgg tttgtactgt atatggttga tttcctgcaa tggctgagat ttgttcacga
     5101 acgcctttat ctgttattcc gatgatggag tatgcttgaa caaaactgga tgtagatgcg
     5161 gcttgtgcac tcttgataag taaggtcaac gcttcttccg ttaagtcctt atcttcaaat
     5221 tttcgcactg agtaatgtcc tagaatagca tctatcgcct gattcatcct aactccccct
     5281 tagtcttgaa aaatttttcg atcgtaattc ggttcttgta aaagtgcgcc aaaattctgc
     5341 tgacgtaacg cttcataagc taaaattgcc gctgtgttcg ataaattcaa cgaacgaata
     5401 tgatctgtca ttggaatacg caaacaattt tcttcattct tttgtaaaag cgcatctggc
     5461 aatccggtcg tttcttttcc aaaaacgaag aaataatctt tgtttgggtc actataatcg
     5521 atatcactat aaacatgacg accaaatttg gtaatgtagt aaaattctcc gccttcattt
     5581 ttctcgaaga attcatctag agaatcgtaa taggaaagtt ttacgttatc ccagtaatca
     5641 agtccagcac gttttaacat tttatcatct gtcgaaaaac caagtggacg gattaaatgt
     5701 aagtaagtat ccgtcccggc acatgttctg gagatatttc cggtattcgc tgggatttct
     5761 ggttgatata gtacgatatg gtttggcatt gcttttcacc tggtttctat taatttgtta
     5821 tggctgttaa ttcttgtaat acttgttcat cttgttcggt ttgaagtgct tgctcgacag
     5881 ctttttcggc atcgcttcca ccgatttttc ttagcgccca gccagccgtt cctcgaatga
     5941 ctggtcttgg atcgttttgt aaacagtcaa ttaagtctgg tacagctgtt ttatctttat
     6001 accgcgctag aataatgatg gcatttcgct gaatgggctt cttcccacgc cacgaacccg
     6061 ccatatcgcc aaattgttct ttaaaagcgc gattggaaat gtgtaatagt ggttttaatt
     6121 ctggtcgaac aagctctgga tccggctcca tctcatcatg aaagtggaaa tcatgcccac
     6181 gattatacgg acaaactacc tgacaagtat cacaaccata caaacgatta tgcaacactt
     6241 cgcgatattt ttcatctaga aagtcttttg tttgtgtcaa ataacttaaa catattttcg
     6301 gattcatctt cccttcaccc agtaaggaac ctgtcgggca ggctttcaca cattgattgc
     6361 aactaccaca caagtcgcta gccggcgtat ctggttcgaa tggtatattg gttatcattt
     6421 cgcctaaata gacccacgag ccgtattctg gcgttatgag cagcgtgttt ttcccgcgcc
     6481 agccaatgcc cgctcgttct gctacagcta catctgataa ttccccagta tccaccattg
     6541 atttcattcg tacatctggc aaacgttcac ttaaaaaagt ttcgagtagc gctaattttt
     6601 ctcgtaaaac ggtatgataa tcaattcccc aagaagctct ggcaaataca cctcgtctag
     6661 ctcctttttt acttataggt gcttctttta atttagacgg ataagcaagt gcaatggcga
     6721 taatcgactg cggttccttg aaaataagct ctggataaac ccgttcatca attaccggat
     6781 gttcaaatcc tgtaaaaagg tccagcgctt ccgcttctag taatcgttct tttaaaaata
     6841 aaaaagggtc tgctgttgtg aaaccaattt tttgaatacc tatttcatgc gcataagcaa
     6901 tgagttcttc tttcaatgcg gcgtaatctg atgtcgactt cactatcatc atcccctctc
     6961 tccttatttt caggcaataa aataaacgca atgcttcgct taaaaaggtc gaaacactgc
     7021 gttgataaca ggatttataa aaaaatataa agcgggtgat gggaatcgaa cccacgacaa
     7081 cagc
//
LOCUS       DASDYK010000117         6997 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.117, whole genome shotgun sequence.
ACCESSION   DASDYK010000117 DASDYK010000000
VERSION     DASDYK010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6997)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6997)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6997
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.117"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..2039
                     /locus_tag="U0308_002465"
     CDS             <1..2039
                     /locus_tag="U0308_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014589031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEM2317421.1"
                     /translation="LDFYFVGIIVIAIFFNFYGIWNDDTVNPYYTAAVTSMVQNIHNF
                     FYGAFDPAGFITVDKPPVALWLQAISALIFGIHGWSVILPQALAGVGSVILLYVLVKP
                     RFGAWAARITALIMALTPIAVAVTRTNNMDAILVFVLLLATFFLFKAVHRAKIGWLLL
                     SFALIGVGFNVKMLQAFMVVPAFLLFYFIATKLSWRKKLVQLVIALVLMLGVSVSWAV
                     VVDQTAASERPYIGSSQTNSVLELAFGYNGMERLLGQETGTGSNGNVEMGTPPSTNST
                     DSSNATPPTPPSGSMQDGANGGTPPQGNNGAPPTGAPSNAANGGGNGSKMTGSTGMFG
                     TGNAGPLRLFQTALGDQISWFLPLAIIGMLAIFLVYRNENKRIYQLTSRQKEIVFWAA
                     WLIPVAGFFSIAGFFHHYYLIMLAPPIALLSGVGLVALFRLYQDKENWQRFLLPAAVT
                     LTGGLQAFFVAAYLPVLAVVIGIAALITSIILIVLRPQPSKLTAKITALALAILLIAP
                     TYWSLTPILYGGNSSLPEAGPQLKQSSGGGFADASVDSDLISYLQKNNTGETYLFGTT
                     DATTAGPYIIKTKEAVMALGGFNGTDPTLTVKQLKQMIQAGEIKYFYLPSNSKASDSD
                     VVKWIQENGTEIDSSKWSSSGSTDDDTTSSASFNMQGGAQGMNGTGTGTLYQLK"
     gene            2166..2771
                     /locus_tag="U0308_002466"
     CDS             2166..2771
                     /locus_tag="U0308_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HEM2317422.1"
                     /translation="MTFWQDMMNFFSYDNLMYWLSEYRNLGPLLAFLLPFIEAFLPFL
                     PFIVFVVVNVNAYGLLGGFLISVTAAIAGSLCVFLLARKFGQTRFLRFISGHKQIKRV
                     MEWIDRHGFSPIFILLVMPFTPSSAVNIVAGLSKIKVYQFILALVGGKLIKVFAISYI
                     GYDFVDLIHQPLKLAILAVSVVILWFVGKRLEHWMSGKNLK"
     gene            complement(2811..3806)
                     /gene="lplA1"
                     /locus_tag="U0308_002467"
     CDS             complement(2811..3806)
                     /gene="lplA1"
                     /locus_tag="U0308_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate protein ligase LplA1"
                     /protein_id="HEM2317423.1"
                     /translation="MYFIDNNNEKDPRINLAVEEFILTELNLDEPVLLFYINKPSIII
                     GRNQNTVEEIDTEYVEKNDVIVVRRLSGGGAVYHDEGNLNFSFITEDDGESFHNFAKF
                     TQPIVEALKRLGVNAELKGRNDLLIDGLKVSGNAQFATKGKMFSHGTLMYDLNLDNVA
                     ASLKPRKDKIESKGIKSVRSRVANISDFMDQEMTTEEFRDLLLLYIFNVEKVEDVKEY
                     KLTAADWEKIHEISAKRYGNWDWNYGKSPKFDLTRTKRFPVGAVDVRLNVQKGIITDI
                     KIFGDFFGVKNVADIEEKLVNTTYKREALDEALADIDVKEYFGNITKDEFLDLLY"
     gene            complement(3830..4561)
                     /locus_tag="U0308_002468"
     CDS             complement(3830..4561)
                     /locus_tag="U0308_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2317424.1"
                     /translation="MKLTVFGHWGGYPLANEGTSSYLLEEAGFKLLIDVGASAVSIMQ
                     NYIDPDDIDAAIISHYHPDHVADVGILQHIRLLSQKKEKPPVLPIYGHKEDERGYSYL
                     EMANVTKAIEYKPDDRLEIGPFKVTFLKTIHPVPCYAMRIEAGDKVFVYTADSAYQDS
                     FIPFSEGADLLVTDTNFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLE
                     VLKQEAAAIYKGEIALASKGFTKTF"
     gene            complement(4674..5342)
                     /locus_tag="U0308_002469"
     CDS             complement(4674..5342)
                     /locus_tag="U0308_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A sortase"
                     /protein_id="HEM2317425.1"
                     /translation="MLKKTIAIIILIIGLLLIFSPFIKNGIVKYMSGHETIEQYKASD
                     IKKNNEKDATFDFESVQLPSMTSVIKGAANYDKDAVVGSIAVPSVDVNLLVFKGTNTA
                     NLLAGATTMRSDQVMGKGNYPLAGHHMRDESMLFGPIMKVKKGDKIYLTDLENLYEYT
                     VTETKTIDETEVSVIDDTKDARITLITCDKPTETTKRFVAVGELEKTEKLTKELENKY
                     FPSK"
     gene            complement(5451..6074)
                     /locus_tag="U0308_002470"
     CDS             complement(5451..6074)
                     /locus_tag="U0308_002470"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HEM2317426.1"
                     /translation="MEAIITKEFFEDKTTIELARDILGMRLVHQTDEGILSGLIVETE
                     AYLGATDMAAHSFQNLRTKRTEVMFSSPGRIYMYQMHRQVLLNFITMPKGIPEAILIR
                     AIEPDEQAKQQMVQNRHGKTGYELTNGPGKLTQALGLSMQDYGKTLFDSNIWLEEAKL
                     PHLIEATNRIGVPNKGIATHFPLRFTVKGSPYISAQRKSRILTDIWK"
     gene            6333..>6997
                     /gene="ltaS"
                     /locus_tag="U0308_002471"
     CDS             6333..>6997
                     /gene="ltaS"
                     /locus_tag="U0308_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoteichoic acid synthase LtaS"
                     /protein_id="HEM2317427.1"
                     /translation="MKDWKIKIQTFLSKNYGFFVLAVILYWLKTYIAYQLEFKLGIEN
                     LMQQILLFINPLSGAIFFMGLALFAKGRRSFIWIIVIDFLMSFILYANIVYYRFFSDF
                     ITLPNLNAKQMQNMGDMGSSITALLSWHDIIYFADIIILIALLAFRFVKPNKTARIRA
                     RKVVGVLTLGIAMFFGNLGLAEIDRPQLLTRTFDRNYIVKYLGMTNYQIYDAVKSTES
                     STQR"
BASE COUNT         1950 a         1334 c         1273 g         2440 t
ORIGIN      
        1 atttagattt ttattttgtt ggaattattg ttattgccat cttttttaat ttttatggta
       61 tttggaatga tgatacggta aatccttatt atacagctgc tgtgacaagt atggtgcaaa
      121 atattcataa ttttttctac ggagcttttg atcctgctgg ttttattacg gtagataagc
      181 cacctgttgc actttggttg caagcgatca gtgcccttat tttcggcata catggttgga
      241 gtgttatctt accacaagcg ttggctggtg ttggttcggt gattttgctt tatgtgctcg
      301 tcaaacctag atttggcgca tgggctgcaa gaattactgc tttgattatg gcgctgactc
      361 ctattgcggt agccgtgacg cgtactaata atatggatgc tattcttgta tttgtgttat
      421 tactagcaac ctttttcctt tttaaagctg ttcatcgtgc aaaaatcggc tggcttttac
      481 tttcttttgc gttgattggt gtcggtttta atgtaaaaat gctccaagct ttcatggtcg
      541 tgcccgcatt tttgctcttc tattttattg ctacaaaact aagttggaga aaaaagctag
      601 ttcaattagt aatcgcactt gtcttaatgc taggtgtctc tgtttcttgg gcagtcgtag
      661 ttgatcaaac agctgcttca gagcgacctt atatcggtag tagtcaaacc aattcggtgc
      721 ttgagttggc atttggctat aatggtatgg aacggcttct tggtcaagaa actggaacag
      781 gtagtaatgg taatgtggaa atggggactc ctcctagcac taactcaaca gattcaagta
      841 acgcaacccc accgactcct ccaagtggaa gtatgcagga cggtgctaac ggcggaactc
      901 ctcctcaagg aaataatggc gctcctccaa ctggagctcc cagtaatgcg gcaaacggcg
      961 gcgggaatgg atcaaaaatg actggtagca caggcatgtt tggaacaggg aacgctggac
     1021 cacttcgtct attccaaacc gcacttggtg atcaaattag ttggttctta ccacttgcta
     1081 ttatcggtat gctagccatt ttcctggtgt atcgaaatga aaataaacga atttatcaat
     1141 tgacctccag acaaaaggaa atagttttct gggcagcttg gcttatccct gtcgccggat
     1201 tctttagtat cgctggcttt ttccatcatt attatttgat tatgctagct ccgccaattg
     1261 ctttacttag tggcgtaggt ctagtggcgc tctttcggtt ataccaagac aaagagaatt
     1321 ggcaaaggtt cctgctacct gctgcagtta cgctaactgg aggtctacaa gcattctttg
     1381 ttgctgctta cttgcctgtt ttagcggtag ttattggtat tgctgcacta attacgtcta
     1441 ttatcttaat tgtacttaga ccacaacctt ccaaactcac cgcgaaaata acagcgctcg
     1501 ctttagcgat tttgctcatt gctccaacat attggtcttt aacacctatt ttatatggtg
     1561 ggaatagttc cttacccgaa gctggaccac aattaaaaca atctagtggt ggtggattcg
     1621 ccgatgcatc tgttgatagt gatttaatta gctatttaca gaaaaacaat accggagaaa
     1681 cctacttatt tgggacaaca gatgcaacaa cagcaggtcc ttatattatt aaaacgaaag
     1741 aagctgttat ggcacttggt ggtttcaatg gaacagatcc aactctaact gtaaaacaat
     1801 taaaacaaat gattcaagcc ggtgaaataa aatatttcta tctcccatca aatagtaaag
     1861 cttctgactc agatgtggta aaatggattc aagaaaacgg tacagaaatt gatagttcga
     1921 agtggagtag ctccggttct acggatgatg acaccacttc tagcgcttct tttaatatgc
     1981 aaggtggcgc tcaaggaatg aatggcactg gtacaggaac actatatcaa ttaaaataaa
     2041 gaagaaatgt taaaatcctg gttaaaatac taggatttta actatattca agctgtttta
     2101 ttagcgcttt atcattttga tgtgagaaaa taagtatgtt gttaaagact actggaggct
     2161 tgcttatgac attttggcag gatatgatga atttcttttc ttatgataat ttaatgtact
     2221 ggctaagtga gtatcggaat ttaggtccac ttttagcttt tctcttacct tttattgaag
     2281 cgtttttacc atttttacca tttatagttt tcgttgtagt gaacgtaaat gcatacggac
     2341 tacttggtgg ttttttaatt tcggtgacag cagcaattgc tggtagtttg tgcgtatttt
     2401 tgttagcacg gaaatttggt caaactcgtt ttttacgttt tatttcgggc cataaacaaa
     2461 ttaaacgagt aatggaatgg attgatagac atggttttag tccgattttc attttacttg
     2521 taatgccatt taccccatct tcggcggtaa atattgttgc aggtctctct aaaataaaag
     2581 tatatcaatt tatattagcg cttgtaggtg gcaaactaat caaagtcttc gccattagct
     2641 atattggcta tgactttgtc gacttgattc accagccgct caaactggct atattagctg
     2701 tttctgtcgt tattttatgg tttgttggaa aacggctgga acattggatg tcaggaaaaa
     2761 atctcaaata aaaaaatgga aagcacgcgg gatgcgtact ttccattttt ttaataaagt
     2821 aaatctaaaa attcatcttt cgtaatgtta ccaaagtatt cttttacgtc tatatctgct
     2881 aaagcctcgt ccaatgcttc gcgcttataa gttgtattga ctaatttctc ctcaatatcc
     2941 gccacatttt ttacgccgaa gaagtctccg aaaatcttga tatctgtaat aatccctttt
     3001 tgtacattta agcgaacatc gactgctcct actggaaaac gttttgttcg tgttaaatcg
     3061 aattttggag attttccgta gttccagtcc caattaccat aacgtttagc agagatttcg
     3121 tggatttttt cccaatctgc agcagttaat ttatattctt ttacgtcttc tactttttca
     3181 acattgaaaa tataaagtaa tagcaaatcg cgaaactctt ccgttgtcat ttcttgatcc
     3241 atgaaatcag aaatattcgc tacacgacta cgaacagact taattccttt tgattcgatt
     3301 ttatctttac gtggttttag cgatgcagca acattatcta ggttcaaatc atacattaat
     3361 gtcccgtgtg agaacatttt ccctttcgtt gcaaattgcg catttccaga aacttttaaa
     3421 ccatcaatca ataagtcgtt acgccctttt agttccgcat tgacgcctaa acgtttcagc
     3481 gcttccacga ttggttgcgt gaatttcgca aaattatgga aagactcgcc atcatcttcc
     3541 gtgataaaac tgaaatttaa gtttccttca tcatgataaa cagcgccgcc gccagaaagt
     3601 ctgcgcacta cgatgacatc atttttctcc acatactctg tatcaatttc ttctactgta
     3661 ttttggttgc gtccaatgat aatcgatggc ttattaatat aaaataacag cacaggctca
     3721 tctagattta attcagttaa aataaattcc tccaccgcta aattaatacg aggatctttc
     3781 tcattattat tatctataaa gtacatactc ctaccccttt tcttctatat taaaatgttt
     3841 tcgtgaatcc ttttgaagca agtgcaattt ctcctttgta aatagccgct gcttcttgtt
     3901 ttagaacttc taaatcgcca acttcgggta aatgactgag gagtaatgat ttcacattgg
     3961 cttctttggc aatttttgca acttccgtgc tagccatatg cacttttgtt tttccggcta
     4021 ggtcatggaa aaaattggtg tctgttacta ataaatctgc cccctctgaa aaagggataa
     4081 aactatcttg ataagcgcta tctgcggtgt atacgaaaac tttgtcacct gcttctattc
     4141 tcatagcata gcaaggtacc ggatggatcg tctttaagaa agttacttta aacggtccga
     4201 tttcaagtct atcatctggt ttatattcga ttgcttttgt tacatttgcc atttctaaat
     4261 aagaataacc gcgttcatct tctttatgtc catatatcgg caatactggc ggtttttcct
     4321 ttttttgtga taataggcga atgtgctgca aaatccctac atctgctaca tggtctggat
     4381 ggtaatgaga aattattgcc gcatcaatat catcaggatc aatatagttt tgcataatag
     4441 aaacagcact tgcgccaaca tcaattaata gcttaaatcc agcttcttcc agcaaataac
     4501 tagatgtgcc ttcatttgct aatggatagc caccccaatg tccaaaaacg gttagtttca
     4561 tcactgcact tcctttctca aaataaacct cctttatatg atacaacatt tataataaaa
     4621 ggagaaatta tccagaaaaa aagacagctt agaaaatccg ctgtcttttc tcattattta
     4681 ctagggaaat atttattctc tagttctttt gttagctttt ccgttttttc tagttcacca
     4741 accgcgacaa accgttttgt tgtttcagtt ggtttatcac atgtaataag tgtaattcta
     4801 gcgtctttcg tatcgtcaat cacacttact tctgtttcat caatcgtttt tgtttccgta
     4861 acagtgtatt cgtataaatt ctcaagatct gttagataaa tcttgtcgcc ttttttgact
     4921 ttcattatag gaccaaacaa catagattca tcacgcatat ggtgacctgc cagcggatag
     4981 ttacccttac ccatgacttg atcagaacgc atggttgttg cacccgccag taaattagct
     5041 gtatttgttc ctttgaaaac taagaggtta acgtctacag atggaactgc gatagaacca
     5101 acgactgcat ctttgtcgta atttgctgct cctttaataa cagatgtcat agagggtagc
     5161 tgaacacttt caaaatcaaa tgtagcgtct ttttcattat ttttctttat atctgatgct
     5221 ttatattgct cgattgtttc atgaccactc atgtatttca caatgccgtt tttgatgaat
     5281 ggggaaaaaa ttaatagtag cccaatgatt aaaataatta ttgcaattgt tttctttaac
     5341 atataattcc tccttgtaac tatttcatta tatagtagct cttcttatga agcaaagaaa
     5401 atcagtgtct ggataaaact attttctcta cctgtgacaa aattgtaaag tcacttccaa
     5461 atatcggtaa gaatccgact ttttcgttga gctgaaatat atgggctgcc tttaacagta
     5521 aatctgagtg gaaaatgagt tgcaattcct ttgtttggca cccctattcg attagttgct
     5581 tctattaaat gcggcaattt tgcctcttct aaccaaatgt tactatcaaa aagagttttc
     5641 ccgtaatctt gcatacttaa tcctaaagct tgcgttaatt ttccggggcc attggtaagt
     5701 tcgtaaccag tttttccgtg acgattttgt accatttgtt gtttagcttg ttcgtcaggt
     5761 tcgatggctc gtattagaat ggcttctggg attccttttg gcatggttat aaaattaagc
     5821 aacacttggc gatgcatttg gtacatgtag attcttcccg gcgatgaaaa catgacttct
     5881 gttcgtttcg ttcggaggtt ttgaaaacta tgtgcagcca tatctgttgc cccgaggtac
     5941 gcttctgttt ccactattag cccagataga attccctcat ccgtttgatg tactagacgc
     6001 atacccaaga tatctctcgc taattcgatt gttgtcttat cttcaaaaaa ttctttcgta
     6061 ataatcgctt ccatttcata cctcaatgtt ttctttttat tctagcagaa ttctattcca
     6121 aatggttctt ttttgactag ttatatcagc ctatttcccc taaaatccta cttcagacgt
     6181 ataggttata acttgccttt tattaatctt gtgttagaat tatgttaaag tgggtgctgt
     6241 atgaaaatgt ttcttgttac ataatacagc ttcttttttt catttcaaaa taacaattaa
     6301 aacgagtaaa tagtgtgtag gagaggtgtt tcatgaagga ttggaaaata aaaatccaaa
     6361 cgtttttaag caagaattat ggattttttg ttctagccgt cattctttat tggctaaaaa
     6421 cgtatattgc atatcaactt gaatttaaac ttggcataga aaatctgatg cagcaaattt
     6481 tgctgttcat taatccatta agtggggcca ttttctttat gggtcttgcg ctctttgcta
     6541 agggacgtcg ttcattcatt tggattatcg tcattgactt tttaatgagt tttattcttt
     6601 acgcaaatat tgtatattat cgattcttta gtgatttcat tacacttccg aatctaaacg
     6661 caaaacaaat gcaaaacatg ggcgacatgg gaagtagtat cacagcgtta ctcagctggc
     6721 acgatattat ttacttcgcg gatattatca ttttaattgc actacttgct ttccgctttg
     6781 taaaaccaaa caaaacagcc cgtattcgtg caagaaaagt agttggggtt ctgacgcttg
     6841 gtatcgcaat gttctttgga aacttgggac ttgcagaaat tgatcgtcca caacttctaa
     6901 caagaacgtt tgatagaaat tatattgtta aatatcttgg tatgactaac tatcaaatct
     6961 atgacgcagt gaaaagtacc gaatcatcca cacagcg
//
LOCUS       DASDYK010000118         6838 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.118, whole genome shotgun sequence.
ACCESSION   DASDYK010000118 DASDYK010000000
VERSION     DASDYK010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6838
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.118"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            62..343
                     /locus_tag="U0308_002472"
     CDS             62..343
                     /locus_tag="U0308_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317428.1"
                     /translation="MNNIKQAIIKLETILENGNEKENRLFVKYNTIKNILDLLEKDQE
                     LKIIEMEVELNGVEDSIENAALLEKRLSEAKSLVEDLANTINSLEIKVK"
     gene            375..536
                     /locus_tag="U0308_002473"
     CDS             375..536
                     /locus_tag="U0308_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003735005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317429.1"
                     /translation="MKDFEMMEAIKQKRLECKLVILENFESSFKEALNKGDSAMVSAL
                     AESLETVIK"
     gene            complement(529..771)
                     /locus_tag="U0308_002474"
     CDS             complement(529..771)
                     /locus_tag="U0308_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317430.1"
                     /translation="MKNRMDIMFKGISDDQPIALMGVISITSFPDNKSFDLNDFYLEA
                     DKTYKIIYKGANELENDLSKVFLMNSNDVLYIEFTI"
     gene            835..1614
                     /locus_tag="U0308_002475"
     CDS             835..1614
                     /locus_tag="U0308_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HEM2317431.1"
                     /translation="MSNLQVIANDMLPVLENEKGEKFVNARELHQSLQVGKKFTTWIT
                     DKLSNYGFSKDEDYFPILGESTFGRPRTEYLLTLDTAKELAMVQNNEMGRAIRKYFIE
                     VEKQARKLATEYPTFSYMIDDPVARAKKWIEEQQEKQEALKQIDEQKPKVIFADAVQT
                     SENTVLVKDLATILKQNGLDIGQNRLFEWLRGSGYLLNKGAYYNKPSQKAMNLGLFEQ
                     KTHIHTDRNGLMITTYTPRVTGKGQIYLLNKLLEEHNQVII"
     gene            1736..2260
                     /locus_tag="U0308_002476"
     CDS             1736..2260
                     /locus_tag="U0308_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317432.1"
                     /translation="MFQKSTSAPTAMQVLAETRTQKELAIDSYVTPALISNQLKGKRT
                     VSLEQAEQLIDSYNEPESTYLFAHEFSNGMIPPLLDGLDSHHAALTCRFELEVTEAVN
                     ALKSGLETMTFNLRKGDMLQREAAKQAISEITDVIATALTLNTSIAKAFNINLQQILE
                     SRDKFYQKNGLVKE"
     gene            2267..2452
                     /locus_tag="U0308_002477"
     CDS             2267..2452
                     /locus_tag="U0308_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2317433.1"
                     /translation="METMEKDILTAEEAAEMLGMKKRTIQSWARNAGLPGKKINGKTW
                     IFSKRELEAWVAQGGEK"
     gene            2468..2656
                     /locus_tag="U0308_002478"
     CDS             2468..2656
                     /locus_tag="U0308_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317434.1"
                     /translation="MTERVFRKTTNFGDSEIHTNSRTKMIANPAFQQKIPLNETGCDN
                     MTDYIEELKLKGYEEVTR"
     gene            2889..3848
                     /locus_tag="U0308_002479"
     CDS             2889..3848
                     /locus_tag="U0308_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HEM2317435.1"
                     /translation="MAIAKEKTMNILASVKDMDRTQWLLTRRLGIGGSDAGIIMGLNQ
                     YKTAFELWLDKTDQVPPGEMAGEAAYWGTQMEEVVAKEFEKRTGKKVRRSNMMYQHPE
                     HDFMLANVDRFVVGEDAILECKTASAYLAKEWEADEVPATYLVQIQHYLAVTGKSKAY
                     VAVLIGGNKFIWKEVERDDELINQIIAFELDFWETNVKGHVAPALDGSSAAEKYLKDR
                     FAKSEAKQVNLSKEYNEFLAERANLGRDITLLETRKKEIDNNIKNELKEAETGITDDF
                     TITWKPVTTSRVDTKRLKEEHLDIYKKLQKESSYRKFAVKENE"
     gene            3848..4663
                     /locus_tag="U0308_002480"
     CDS             3848..4663
                     /locus_tag="U0308_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HEM2317436.1"
                     /translation="MATNDELKNQLANKQNGGQVASAQSLDLKGLLEAPTMRKKFEKV
                     LDKKAPQFLTSLLNLYNGDDYLQKTDPMTVVTSAMVAATLDLPIDKNLGYAWIVPYKG
                     RAQFQLGYKGYIQLALRTGQYKSINVIEVREGELLKWNRLTEEIELDLDNNTSEKVVG
                     YCGYFQLINGFEKTVYWTRKEIEAHKQKFSKSDFGWKKDYDAMAKKTVLRNMLSKWGI
                     LSIDMQTAVTEDEAEPRERKDVTDDESIPDIIDAPITPSDTLEAGSVVQGSMI"
     gene            4693..5619
                     /locus_tag="U0308_002481"
     CDS             4693..5619
                     /locus_tag="U0308_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317437.1"
                     /translation="MDGYIALHRKIIDSWIWQDPEFYRLWSYCLIKASFKEREIFLGQ
                     QIVKLNPGQFVIGREKLEEAMNIGLKNKRTALTWWRRLQKLEKAQMLNIKSYNKFSIV
                     TIENWGLYQGSDIENEQQNEQQTNNKRTTDEQQTNTNNKDNKDNKEKNDNKDNNKRQN
                     KFDEVHLSLANLLFEMIKSNNPEEKVPDVEKWAHDIRIMIEQDKRDAEKVKNAIIWSQ
                     KNDFWCGVIKSPKSLRKNYDQMATQRNKPVANKPFNKYSKQTKPEILPDWFNKEQKQT
                     KQETSTTESSEDLEKKVAEIKAKLAARSEVQA"
     gene            5616..5783
                     /locus_tag="U0308_002482"
     CDS             5616..5783
                     /locus_tag="U0308_002482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317438.1"
                     /translation="MTEYALYKADELLIIGTVDKLAEFQKVKRETILFYATPTYQKRT
                     TDKGLRVIRVV"
     gene            5799..6080
                     /locus_tag="U0308_002483"
     CDS             5799..6080
                     /locus_tag="U0308_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014589141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317439.1"
                     /translation="MGKYYWHVSRFGGKPTEIRHYNHITKMYKFILRNPAMFKDKTLT
                     IYDDAKAVTNMTFNEIKYRASLNLCETVERKYVLSLTQRLKEEQKEAKK"
     gene            6077..>6838
                     /locus_tag="U0308_002484"
     CDS             6077..>6838
                     /locus_tag="U0308_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEM2317440.1"
                     /translation="MKRILNYPGSKWGLADLIIENMPEHKSYLEPFCGSCAVFMNKQK
                     ATLETINDLDGRLVNLFKTMRDNPEELQYLIMHTLYSREEYMLSHEISSDSLEDARRM
                     AVRLWFAVGGKTNANVGFRKNVSWNGPYNAYEWNDMYNRIGIAAARLKDAQIENVDAI
                     KLIEQHNDKDTLIYCDPPYVATSLASSHYQHDFSLEQHKELLKVLKKHEGKVMLSGYE
                     SELYKQELSDWPALKTMTKVGITSEKKSDRQEIIWC"
BASE COUNT         2666 a         1045 c         1448 g         1679 t
ORIGIN      
        1 gaaatgcgaa gactgttatg gtctggaaaa tactaaaaac cataatttag gaggaagaaa
       61 aatgaataac atcaaacaag caattattaa attagaaaca attttagaaa atggtaatga
      121 aaaagagaat agattattcg ttaagtacaa cactataaaa aacattttag atttacttga
      181 aaaagatcaa gagctaaaaa ttatcgaaat ggaagtagag ctgaatggag tagaggattc
      241 catagaaaac gccgctttgt tagaaaagag attaagtgaa gctaaatctt tggtggaaga
      301 cttggctaac actataaact cgttagaaat taaggtgaag tgaagctttt ccaaaaagaa
      361 taggaggtta aaaaatgaag gactttgaaa tgatggaagc aattaaacaa aaacggcttg
      421 aatgtaaatt agtaattttg gaaaattttg aatcgagttt taaagaagcc ctcaataagg
      481 gagattccgc catggtgtcg gctttagcgg aatcattgga aacagttatt aaatagtgaa
      541 ctcaatgtaa aggacatcat ttgagttcat tagaaaaact ttcgataaat cgttttctaa
      601 ctcgtttgca cccttataaa tgattttgta agttttatcg gcttctaaat aaaaatcatt
      661 taaatcaaaa cttttgttat ctggaaaaga tgtaatgctt ataacgccca ttagagcaat
      721 gggctggtca tcagagatac ctttgaacat tatatccatg cgatttttca caaattccac
      781 ctcccttcac aaaaactata gcactgtgaa agggcgaaca gaaaggagaa caaaatgtca
      841 aatttacaag taattgcaaa tgatatgttg ccagttttag aaaatgaaaa aggcgagaaa
      901 tttgtaaatg cacgggaact acatcaaagc ttgcaagttg gaaaaaaatt cactacttgg
      961 attactgaca agcttagtaa ttatggattt tcaaaggatg aagactattt cccaattttg
     1021 ggagaaagta cattcggtag acccagaaca gaatacttat taactttaga cactgctaaa
     1081 gaattagcaa tggtacaaaa caatgaaatg ggtcgagcaa ttagaaaata ctttattgaa
     1141 gtagaaaaac aagcgaggaa attagcaact gaatatccaa cattttcata catgatagac
     1201 gacccagtcg ctagggctaa aaaatggatt gaggagcaac aagagaagca agaagcatta
     1261 aagcaaattg atgaacaaaa accgaaagtg atttttgcag atgctgtaca aacgagcgag
     1321 aatacagttt tagtaaaaga cttagcgaca atccttaaac aaaatggctt agatattggg
     1381 caaaacaggc tttttgaatg gctaagagga agcggatatt tgctaaataa aggggcttat
     1441 tataataaac catcgcaaaa ggcgatgaat ttaggattgt ttgaacaaaa aacacatatt
     1501 catacagata gaaacggctt aatgataact acctatacac ctcgagttac tggcaaaggt
     1561 caaatatacc tattaaacaa attattagaa gaacacaatc aagtcataat ttaagcgtcg
     1621 cctaccacaa cgacgcttat gcagacaact tagtcacggg gagcgactaa caatagtata
     1681 taacgataag ttgttaatta gtggttaaaa aataaacaaa aaggattgag atattatgtt
     1741 tcaaaaatca acatcagcgc caaccgcgat gcaagtttta gcagaaactc gcacgcaaaa
     1801 agagctagcg attgatagtt atgtaacacc agcactaata agcaaccagt taaaaggaaa
     1861 gcgaacagtt tcacttgaac aagcagaaca gttaattgat agctacaacg aaccagaaag
     1921 cacatattta ttcgcacatg aattttcaaa cggaatgata ccgcctctac tggacgggct
     1981 agacagtcac catgcggctt taacttgtcg ctttgaacta gaagtaacag aagcagtaaa
     2041 tgcgttaaaa agcggattag aaacgatgac attcaattta agaaaaggcg acatgctaca
     2101 acgagaagcc gcaaaacaag caatttcaga aataacagat gtaatcgcaa cagcattaac
     2161 gcttaacaca agtatagcga aggcattcaa cattaattta caacaaattt tagaaagtcg
     2221 agataaattc tatcaaaaaa atggtttggt gaaggagtga gaaacaatgg aaacaatgga
     2281 aaaggatatt ttgacagctg aggaagcggc ggaaatgtta ggaatgaaaa agaggactat
     2341 tcaatcttgg gctagaaatg cgggattacc cggcaaaaaa ataaacggca agacatggat
     2401 ttttagcaaa agagaacttg aagcgtgggt agcgcaaggt ggagaaaaat aaaggagggc
     2461 tacaacaatg acagaaagag ttttcagaaa gactacaaac ttcggtgata gcgaaattca
     2521 tacaaatagc agaacaaaaa tgattgctaa tccggcattt cagcagaaaa tcccgttaaa
     2581 cgaaacaggt tgcgacaaca tgacggacta tatcgaagag ttgaagttaa aaggctatga
     2641 ggaggtcacg cgctgatgga tgtatttatg gtaatgattt tcgtgtcgtt tatgtctgta
     2701 atcgcaggtt tttggctgag aggaagtgat aaacgtggtt gagaatccga tggttgttga
     2761 tgatctttgg gacgatggtt ttagacatta aaaaagcacg catagcagtg cgcgctttaa
     2821 ggatttgaga tattacctta agaaaattat acctcaaatt cacatattaa tcaatggagg
     2881 tagcatatat ggctattgca aaagaaaaga caatgaacat tttagcaagc gtgaaagaca
     2941 tggatagaac acaatggttg ctgactcggc gcttaggtat cggcggaagc gatgcgggaa
     3001 tcatcatggg tttaaatcaa tacaaaacag ctttcgagtt gtggttagac aagaccgacc
     3061 aggttccgcc cggtgaaatg gcaggagaag cagcatactg gggaactcaa atggaagaag
     3121 ttgtcgcaaa agaattcgaa aagcgaactg gcaagaaagt aagacgtagc aacatgatgt
     3181 atcaacatcc agagcatgat tttatgttgg cgaacgttga taggtttgtg gttggtgaag
     3241 acgctatttt ggaatgtaaa acagcatcgg catacctagc aaaagaatgg gaagctgacg
     3301 aagtaccagc gacttaccta gtgcaaatac aacactattt agcggtcaca ggcaaaagta
     3361 aagcgtatgt agcagttcta atcggaggaa ataaattcat ttggaaagaa gtagaacgcg
     3421 atgacgagtt aatcaatcaa ataatcgctt ttgagttaga tttttgggaa acgaacgtaa
     3481 aaggacatgt ggcacctgcg ttggatggtt caagcgccgc agaaaaatat ttaaaagatc
     3541 gttttgctaa gtcagaagct aaacaagtta atttatcaaa agaatacaat gaatttttgg
     3601 ctgaaagagc aaatttagga cgcgatataa cgctcttaga aacacgaaaa aaagaaattg
     3661 ataataatat caagaatgag ttaaaagaag ctgaaacggg catcacagat gattttacga
     3721 ttacttggaa gcctgttaca acttcaagag tagatacaaa acgtttaaaa gaagaacatc
     3781 tagatattta taaaaaatta cagaaagaaa gtagctatag aaaatttgca gtgaaggaga
     3841 atgaataatg gcaactaacg atgaattaaa aaatcaatta gcaaataaac aaaatggagg
     3901 gcaagtagca agcgcacagt cattagactt aaaaggtttg ctagaagcac cgacaatgcg
     3961 caagaaattc gaaaaggtac tagataaaaa agcgcctcaa tttttaactt cccttttaaa
     4021 tctttataat ggcgacgact atttacaaaa aactgacccg atgacagttg ttacttccgc
     4081 catggttgct gcaacactag atttaccaat cgacaaaaat ttaggttatg cgtggattgt
     4141 tccttataaa ggcagagcac agtttcaact tggttataaa ggatacatcc agttagcact
     4201 acgcacagga caatataaaa gcattaatgt tatcgaagtg cgcgaaggtg agctactgaa
     4261 atggaaccga cttaccgaag aaatcgaact agatttagac aacaatacaa gtgaaaaagt
     4321 cgttggttac tgtggctatt tccagttaat taatggcttt gaaaaaacgg tctattggac
     4381 tcgtaaagaa atagaagcgc ataaacagaa atttagtaaa tcggattttg gatggaaaaa
     4441 agattacgat gcaatggcta aaaagactgt tcttagaaac atgttaagca agtgggggat
     4501 tttatccatc gacatgcaaa cagcggttac agaggacgaa gcagagccta gagaacgaaa
     4561 agacgttaca gacgatgagt cgatacccga tattatagat gcgcctataa cgccgtctga
     4621 cacgttagaa gctggctcgg tagttcaagg gtcaatgatc taagtgaaaa ttgataaggc
     4681 aggggaattg cgatggatgg ttatatagct ttacacagaa aaattattga tagctggata
     4741 tggcaagacc ctgagtttta tcggctttgg tcatactgcc ttatcaaagc gtcatttaaa
     4801 gaaagagaaa tatttttagg tcaacaaata gtcaaattaa atccgggtca atttgtaatc
     4861 ggaagagaaa aattagaaga ggcaatgaac ataggactca aaaataaacg aacagcactt
     4921 acgtggtggc gacgattaca gaagctagaa aaagcccaaa tgttgaacat caaatcgtac
     4981 aacaaatttt ctattgtaac tattgaaaac tgggggttat atcaaggtag cgatatagaa
     5041 aacgaacagc aaaatgaaca acagacgaac aacaaacgaa caacagacga acaacagacg
     5101 aacacaaaca ataaagataa taaagataat aaagagaaga atgataataa agataataat
     5161 aaacgtcaaa acaagtttga cgaggttcat ttatctttag ctaatttatt atttgaaatg
     5221 attaagtcaa ataacccaga agaaaaagtt ccagatgttg aaaaatgggc tcatgacatc
     5281 agaattatga ttgaacaaga taagcgagat gctgaaaaag ttaaaaacgc tattatatgg
     5341 tcacagaaaa atgatttctg gtgcggtgtc ataaaatctc cgaaatcttt aaggaaaaat
     5401 tatgatcaga tggcgacgca acgtaataag ccagttgcta acaagccgtt caacaaatac
     5461 agcaaacaaa cgaaaccaga aatattgcca gattggttca acaaagagca gaaacaaaca
     5521 aaacaagaaa cttcaacaac agaatcaagc gaagacttag aaaagaaagt cgctgaaatt
     5581 aaagcgaaat tagcggctag aagcgaggtg caggcgtgac agaatacgca ctttataaag
     5641 cagacgaact actaataatc ggcacagtag acaaactagc ggagtttcag aaagtgaagc
     5701 gtgagacgat tttgttttat gctacgccta cgtatcaaaa gaggacgact gataaggggt
     5761 taagagtaat tagagtggtt tagaaaggat gaaatttctt gggaaaatat tactggcacg
     5821 tgtcaagatt tggtggaaag ccgacagaaa ttcgacacta taaccacatt acaaaaatgt
     5881 ataaatttat tttgcgaaat ccggcaatgt tcaaagataa aactttaacg atttatgatg
     5941 acgcaaaagc agttacaaac atgacgttta acgaaattaa gtatagagct agtttgaatt
     6001 tatgtgaaac ggtagaaaga aagtatgtgt tgtcacttac tcaaaggctt aaggaggaac
     6061 agaaggaggc taaaaagtga aacgaatact taattatccc ggcagtaaat ggggtttggc
     6121 agatttaata attgaaaata tgccggagca taaaagttat ttagaaccat tctgcggatc
     6181 atgtgcggtc tttatgaaca agcaaaaagc tactttagag acgataaacg atttagacgg
     6241 tcgactagtt aatcttttta aaacaatgcg tgataatcca gaagaactgc agtatttaat
     6301 catgcacacg ctgtattctc gtgaagagta tatgctttcg catgaaatat caagtgattc
     6361 attagaagac gctagacgca tggctgtgag gctctggttt gccgtcggag gcaagactaa
     6421 tgcaaatgtt ggatttagaa aaaacgtgtc ttggaatggt ccttacaatg catatgagtg
     6481 gaatgacatg tataaccgaa tcggaatagc tgcagcaaga ctgaaagacg ctcaaatcga
     6541 aaatgtagat gcaattaaac tgattgaaca gcataacgat aaagatacac tgatatattg
     6601 tgacccgcca tatgttgcaa cttctttagc aagttcacat tatcagcatg actttagttt
     6661 agagcaacac aaagagttac taaaagtgct taaaaagcat gagggcaaag taatgttaag
     6721 cggctatgaa tcagaactat ataaacaaga gttatcagac tggccagctc ttaaaacaat
     6781 gacaaaagta ggcattacat cagaaaagaa atcagatagg caagaaatta tttggtgc
//
LOCUS       DASDYK010000119         6814 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.119, whole genome shotgun sequence.
ACCESSION   DASDYK010000119 DASDYK010000000
VERSION     DASDYK010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6814
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.119"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(127..978)
                     /gene="prmC"
                     /locus_tag="U0308_002485"
     CDS             complement(127..978)
                     /gene="prmC"
                     /locus_tag="U0308_002485"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEM2317441.1"
                     /translation="MTQISQLLKNAEAILLEKGLDQNAAEILLETRMGLSRSELWMEI
                     SRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPRPETEELVAC
                     AEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPDISMTASDISAPALAVAKKNALLLNA
                     DVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEPSLALFAENDGL
                     AIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHKDINSKDRYV
                     TCSNILV"
     gene            complement(965..2041)
                     /gene="prfA"
                     /locus_tag="U0308_002486"
     CDS             complement(965..2041)
                     /gene="prfA"
                     /locus_tag="U0308_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEM2317442.1"
                     /translation="MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITAT
                     VETYREYKNVNEQINETKELLGEKLDDEMREMAKEEFAELQKEKADLEERLKLLLVPK
                     DPNDDKNVILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKE
                     IIAMMNGNDAFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDK
                     DIRTDTFASTGAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARV
                     YDKFEREAREEYDANRKSAVGTGDRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGK
                     LDEIIDALILEDQTSKLEHLNDAN"
     gene            complement(2064..2639)
                     /locus_tag="U0308_002487"
     CDS             complement(2064..2639)
                     /locus_tag="U0308_002487"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HEM2317443.1"
                     /translation="MAQLFFRYGSMNSGKTIEILKVAHNYEEQNKTVAIFTSGIDDRD
                     QVGFISSRIGLKREATPIFSDTNIFEIVANIKPKPNCVLLDESQFLEKEHVFQLAKIV
                     DELNIPVIAYGLKNDFRNELFEGSKYLLLYADKLEEMKTICWFCAKKATMVLRVDDKG
                     KPVYTGEQIMIGGNDHYYPVCRKCHANPPIK"
     gene            complement(2751..3617)
                     /locus_tag="U0308_002488"
     CDS             complement(2751..3617)
                     /locus_tag="U0308_002488"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEM2317444.1"
                     /translation="MRIRVPATTANLGPGFDSCGLALTLYLTLDIGAEADSWYIEHNI
                     GGGIPHDETNVIIETALNLAPNLTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLA
                     ELNLSKEEKVRIAAEIEGHPDNVAPAVLGNWVVGAKLDGEDFYVRHLFPDCALIAFIP
                     KAELLTSESRGVLPDTLPFKEAVQASSIANVMIAAILRNDMALAGEMMERDLWHEKYR
                     SQLVPHLTQIRDVAKSQGAYAACLSGAGPTVLVFAPRNLANTLQTSLQTLEIDADVLL
                     LDVEGSGAEVFR"
     gene            complement(3617..4672)
                     /locus_tag="U0308_002489"
     CDS             complement(3617..4672)
                     /locus_tag="U0308_002489"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEM2317445.1"
                     /translation="MYKGLLEKYKEYLPVTDKTPMISLAEGNTPLIPLPNLSKELGVT
                     LYGKYEGLNPTGSFKDRGMVMAVAKAKEEGAEAVICASTGNTSAAAAAYATRAGLKAY
                     IVIPEGKVALGKLAQAVMYGADIISIQGNFDEALKSVRELAETEAVTLVNSVNPYRLE
                     GQKTAAFEICEQLGSAPDVLAIPVGNAGNISAYWKGFKEWNEAKASGLPRMHGFEAEG
                     AAAIVQGKPIDNPETIATAIRIGNPASWELAEAARDESGGYIHSVTDDEIVNAYKKIA
                     AQDGVFIEPGSAASLAGVIQHVANGTIKKGETVVCVFTGNGLKDPDTAMSVHEIPISH
                     VDDIEAMRTHLRSGVKA"
     gene            complement(4675..5961)
                     /locus_tag="U0308_002490"
     CDS             complement(4675..5961)
                     /locus_tag="U0308_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEM2317446.1"
                     /translation="MEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYHISVKKVL
                     VRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVV
                     TANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVN
                     GTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMN
                     VNLDNVETNGIRGISPEDIDVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLA
                     GVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSY
                     KHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATV
                     VIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG"
     gene            complement(6183..6428)
                     /locus_tag="U0308_002491"
     CDS             complement(6183..6428)
                     /locus_tag="U0308_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HEM2317447.1"
                     /translation="MKTGIHPEYRPVVFVDTSTDFKFLSGSTKSSSETIKWEDGNEYP
                     LLRVEISSDSHPFYTGKQKHATADGRVDRFNKKYGLK"
     gene            complement(6530..>6814)
                     /gene="gtcA"
                     /locus_tag="U0308_002492"
     CDS             complement(6530..>6814)
                     /gene="gtcA"
                     /locus_tag="U0308_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall teichoic acid glycosylation protein
                     GtcA"
                     /protein_id="HEM2317448.1"
                     /translation="IANTIAFIASVLFAYFSNKKFVFDSYTPTWKDRLREASSFFGFR
                     CLTYIIDILVMILLISYLSVDELWAKIWTNIIVLVLNYVFSKWIIFKVKK"
BASE COUNT         1898 a         1492 c         1208 g         2216 t
ORIGIN      
        1 aaagctaagt aaaaaagcca ttttctttat taagatttga ttaaaaaaat tttttgcaca
       61 acattttatc cacagttttg tggataactt tccaaagaaa aagacgcttc ttttatagaa
      121 acgcctttat accaatatat tagaacatgt tacgtagcga tcttttgaat tgatatcttt
      181 gtggataata actgtagaat gtggataact tttttcgaat aattgtttta cacgctcgcc
      241 ttgtgtataa cctatctcca cccctaccca aaaagaggaa tttaggacat attgtaagtt
      301 atccacaaat cgttcataaa tagcaagtcc atcattttca gcaaataatg ctaatgaagg
      361 ttcgtttttt agcacataat ccgacatttc tgctttttct gcttcagaaa tatagggcgg
      421 attggcgaca atcatatcga atcgttcttc gttttgttta aatgcttcaa gtaaatctgt
      481 ttcgacaaaa cgcacatccg catttaataa caatgcattc tttttcgcca cggcaagtgc
      541 tggagcagaa atatcagaag ccgtcatcga aatatcagga aatgcttttt tgagcgcaat
      601 cgcgataatc ccgcttccgg tgcatacatc tagtacgttt ttaactggat gttttttcaa
      661 aaaatcctcc gcacaagcga ctaactcttc tgtttcggga cgcggaataa ggacatcttc
      721 tgtcactaaa aaatcatagc cataaaaagg tgctgttttt aaaatatact gcaccggctc
      781 accagctaag tatctagcaa aatcttcctc gaattgcttt tcatgatttg gttcaagttc
      841 acgacttatt tccatccaaa gctcagaacg cgaaagtccc attctggttt ctagtaaaat
      901 ttctgctgca ttttggtcta gccctttttc aagaaggatg gcttcagcat tttttagcaa
      961 ctgactaatt tgcgtcattt aaatgctcca atttacttgt ttgatcttct aggataagcg
     1021 catcaatgat ttcatcgagt ttaccttcca taatttgatc tagcttttga atggttaagc
     1081 cgatgcgatg gtcggttacg cggttttgcg gatagttgta agtccggata cgttcggagc
     1141 ggtcacccgt acctacagct gatttacggt tggcatcata ttcttcgcga gcttcacgtt
     1201 caaatttatc atatacacgt gcgcgtaata ctttcatcgc tttgtcttta ttttttagct
     1261 gggaacgttc atcttgcatc gatacgacaa tcccggttgg aatatgcgtt agacgtacag
     1321 ctgacatcgt cgtattgaca ctttgtccac cggcaccagt agacgcaaat gtatcagtgc
     1381 ggatatcttt atcgtgcagt tcaatttcta cttcttccgc ttctggcaaa atggctactg
     1441 tcgctgttga tgtatggatt cgaccgcctg attctgtttc tggtactcgt tgaacacggt
     1501 gcgccccgtt ctcatatttc attcgggaaa aggcatcatt tccgttcatc atcgcaataa
     1561 tttctttgta accgccaata ccggtcgggt tcgcgtccat gatttctact ttccagccgc
     1621 gtgattccgc atatttgctg tacatacgga ataaatcgcc ggcaaataaa gctgcttcat
     1681 ctcctccagc tgctccacgg atttctaaaa taacgttttt gtcatcatta ggatcttttg
     1741 gaacgagtaa tagttttagt cgttcttcta agtctgcctt ttctttttga agttccgcga
     1801 attcttcttt ggccatttcg cgcatttcat cgtctagttt ttctcctagg agttcctttg
     1861 tttcgttaat ttgttcgttc acatttttgt attcgcggta cgtttcgact gtcgccgtaa
     1921 tgccggattg ttctttggaa aggtcgcgta gtcgttttgg atccgatact acatctggat
     1981 cacttaataa ctcatttagt tcatcataac ggtcttccac cgcctgtaat cgatcataca
     2041 ttgtatttca acacctcttt taattatttt attggtggat tggcatgaca tttgcgacac
     2101 acagggtaat agtggtcatt tccgccaatc ataatttgtt cacctgtata aactggtttt
     2161 cctttgtcat ccacgcgcag aaccatcgtt gcctttttag cacaaaacca gcaaattgtt
     2221 ttcatttctt ctagtttatc tgcatataat agcaagtatt tcgagccttc gaataattca
     2281 tttcgaaaat cattttttaa accataagca ataactggga tatttaattc atccacaatt
     2341 ttcgctaact gaaatacgtg ttctttttct agaaattgcg attcatctaa aagaacgcaa
     2401 tttggttttg gtttaatatt cgctacgatt tcaaaaatat ttgtgtcact aaaaatagga
     2461 gttgcttctc gtttcagtcc aattcgactt gaaatgaagc caacttggtc tctatcgtca
     2521 atacctgaag taaagatagc cactgtttta ttttgttctt cataattatg tgcgactttt
     2581 agaatttcaa tggttttccc actattcatg gaaccataac ggaaaaataa ttgtgccatt
     2641 aagaccgctc cctttaactt tataaactct tttcctattt tatcatagag cggcacaaat
     2701 tgggacatat agttaaaaaa agctacgccg cataggggca tagcttgatt ttaacgaaaa
     2761 acttctgcgc cgctcccttc gacatcaaga agaagaacgt ctgcatcgat ttccagtgtt
     2821 tgtaaagatg tttgcagtgt gttagcgagg tttcttggag cgaatactaa gacagttggg
     2881 cccgcaccgc tcaaacaagc agcataggct ccttggcttt ttgcaacatc gcgaatttgt
     2941 gttaagtgtg gcactaattg actgcgatat ttttcatgcc ataaatcacg ttccatcatt
     3001 tcaccagcta gcgccatatc attgcgtaaa attgctgcaa tcattacatt ggcgatactg
     3061 ctcgcttgga cagcttcttt gaatggaagc gtatcaggca aaacaccgcg actttccgaa
     3121 gtaagaagtt ctgcctttgg aataaaagca attaaagcac aatccggaaa aaggtggcgt
     3181 acatagaaat cttctccatc taatttcgct cctacgaccc agtttccaag aacagcaggc
     3241 gcaacattat cgggatgccc ttctatttca gcagctatcc gaactttttc ctcttttgaa
     3301 aggttaagtt cagcaagtgt attggctaat tcaatccccg caacaaccgc tgcagaacta
     3361 ctaccgagtc cacgagctgg cggtatatca caggtcatca ctaaatgatg cggcgttaaa
     3421 ttaggcgcca ggtttaaggc cgtttcgata attacattgg tttcatcatg cggaatcccg
     3481 ccgccaatat tatgttcgat ataccaagag tctgcttccg ctccaatatc aagcgttaaa
     3541 tataacgtta acgctaaacc acacgaatca aagccagggc caagattggc cgttgttgcc
     3601 ggtacacgaa tacgcattaa gctttcactc ctgaacgtaa atgtgtgcgc attgcttcga
     3661 tatcatccac atgagaaatt ggaatttcat gcacactcat cgcagtatcc ggatctttca
     3721 agccgtttcc agtaaagaca caaactactg tttcgccttt tttaattgtt ccatttgcta
     3781 catgttggat gacaccagct aatgaagcgg ctgaacctgg ctcgataaag acaccatctt
     3841 gtgctgcaat ttttttatac gcatttacaa tttcatcatc tgttacagaa tggatatatc
     3901 cgccagattc atcgcgagct gcttctgcaa gctcccaact agctggattt ccgatacgaa
     3961 tcgccgttgc aattgtttcc ggattatcaa tcggtttacc ttgaacaatc gcagccgcac
     4021 cttccgcttc aaaaccatgc atccgtggaa gtccagaagc cttggcctca ttccactctt
     4081 taaacccttt ccagtaggca gaaatgtttc cggcattacc tactgggatt gcaaggacat
     4141 ctggagcaga acctaattgc tcacaaattt cgaatgcagc tgttttttga ccttctaaac
     4201 gataaggatt taccgagttt acaagagtta ctgcttctgt ttcagccagt tcacgaaccg
     4261 attttaacgc ttcgtcaaaa ttaccttgaa ttgagataat atctgcgccg tacataactg
     4321 cttgcgctaa ttttcctaga gcgactttgc cttctggaat aacaatgtac gcttttaatc
     4381 ccgcacgtgt tgcgtatgcc gcagccgcag cagaagtatt cccagtggat gcacaaataa
     4441 ccgcttcggc accttcttct ttcgctttag caacagccat aaccattcca cggtctttaa
     4501 aagaaccggt tggatttaag ccttcatatt ttccgtataa agtaacaccc agttctttgg
     4561 acaaattcgg taatggaata agtggtgtat ttccttccgc aagtgagatc attggtgttt
     4621 tatcagttac tggtagatat tctttatatt tttctagtaa acctttatac atatttaacc
     4681 ctccacaacg gaatattttg cgagcatttg catttctggc tcatctttga ccctagcgat
     4741 tgcttgttct aattgtgctt gactagttga atgtgtcacg ataacaacgg tcgccgtaaa
     4801 atcatcatac ggttgttgca aaattttatc aaaaccaaca ccggcttctg caaaaatttg
     4861 cgtcaactta aggaaggttc ctgttttatc gtccattgtt agacgaagat agtatttcga
     4921 gaaaacttgt tctttcggtg tatgcttcgt ttcgtgtttg tagctgttaa aagcattccc
     4981 attagtacca agacggctat ttttagcaac ggtaattaaa tcactaacca cactggtcgc
     5041 agttggtaat tcgccagcac caggtccgta aaacattgtt tctccgactg ctgcaccagt
     5101 tacaaatacg gcattatttt catagttaac acctgcaagc ggatgagcct ttggtaataa
     5161 aaccggcccc acgttgacat taactgtgcc gtttgtttct tccgccgtac ctactagttt
     5221 aattttataa cctaattggt aagctacatc gatatcttca ggcgaaatcc cgcgaatacc
     5281 atttgtttct acattatcta aattcacatt cataccaaat gcgagtcttg tcataataac
     5341 catttttctt gcggcatcga ttccgtctac atcatttgtt ggatcagatt cggcaaaacc
     5401 cagcgcttgt gcttctgcta aaacatcttc atatgacttt ttctctgtcg tcatttttgt
     5461 tagcatgaaa ttggttgtcc cgttgacgat tcccattact ttttgaattt tatctgctgc
     5521 aaggctgttt acgatcgtac gtaaaattgg aattccacct gcaacacttg cttcataaaa
     5581 caaatcacag ttattagctt gtgcaactgc cactaattcg tcgccgtgta gcgcaatcaa
     5641 atccttattc gcagttacta catgctttcc agctttcaag gcctgcaaaa tgtattcccg
     5701 cgcagttgtg atgctgccca taacctcgac aacaacagca atttctggat catccagtac
     5761 atcagacgga ttggtggtta gttcaaaacc ttttgtttca taacggcgat ttttttctaa
     5821 gtcacgaact agcactttct taacagaaat atggtatcca gttacttgac taattttttc
     5881 ttgatgctct tctaaaatat gaataacacc gctacctacc gttccaaatc ctaacacacc
     5941 tacttgtaac tttgcttcca cttgaaaacc tccttattat tgtttaacaa aacagaaaat
     6001 ttaacttttt taatacctac tcataaaaaa agtaattagt gatattatac gcaacttcac
     6061 agggaaaagt aaacccttga aaggaaagtt tttattttta gtagttctga gaaataattc
     6121 cataaaaaaa cacacccagc aaaagctgag tgcgcaaatt atttcgttcg ttacatacag
     6181 tcttatttga gaccgtattt tttgttgaag cggtccacac ggccgtctgc agtcgcatgt
     6241 ttttgtttac cagtatagaa cgggtgcgaa tcagaagaga tttcgacacg tagtaatgga
     6301 tactcgttgc catcttccca tttaattgtt tcgcttgagc tcttagtaga acctgacaaa
     6361 aatttgaaat cagtactagt atcaacaaat accactggac ggtactcagg atgaattcca
     6421 gttttcattt cttttcaact ccttcgccct gaatcatctg aaacagagta attaagtgct
     6481 tttacacaca gtatagatat tataacaatg ttgaagcaaa caagcaagat tattttttca
     6541 ctttaaagat tatccatttg ctaaacacgt agttcagtac aagcacaata atattggtcc
     6601 agattttcgc ccataattcg tctacagata aataactgat taacagaatc atgactaaaa
     6661 tatctattat ataggttaaa caacgaaaac caaaaaatga actcgcttca cggaggcggt
     6721 ctttccaagt tggtgtataa ctatcaaaaa caaatttttt attcgaaaag taggcaaaaa
     6781 gtactgatgc gataaaagca atggtatttg caat
//
LOCUS       DASDYK010000120         6787 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.120, whole genome shotgun sequence.
ACCESSION   DASDYK010000120 DASDYK010000000
VERSION     DASDYK010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6787)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6787)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6787
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.120"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..488
                     /gene="inlC"
                     /locus_tag="U0308_002493"
     CDS             <1..488
                     /gene="inlC"
                     /locus_tag="U0308_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class 3 internalin InlC"
                     /protein_id="HEM2317449.1"
                     /translation="IPSACLSRLFVDNNELRDTDSLIHLKNLEILSIRNNKLKSIVML
                     GFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVKDP
                     DGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEYINVGETEAIFDGTVIQPIQ
                     N"
     misc_feature    709..847
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00558"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L20 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00558"
     gene            930..1445
                     /gene="infC"
                     /locus_tag="U0308_002494"
     CDS             930..1445
                     /gene="infC"
                     /locus_tag="U0308_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEM2317450.1"
                     /translation="MSKDMLVNDGIRAREVRLIDQDGEQLGVKSKIDALQIAEKANLD
                     LVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTIDEHDFDTK
                     LRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRS
                     MFLVLAPLHEK"
     gene            1467..1667
                     /gene="rpmI"
                     /locus_tag="U0308_002495"
     CDS             1467..1667
                     /gene="rpmI"
                     /locus_tag="U0308_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEM2317451.1"
                     /translation="MPKMKTHRGSAKRFKRTGSGKLKRRHGFTSHMFANKSQKQKRKL
                     RKSAMVSAGDFKRIRQMVAKMK"
     gene            1707..2066
                     /gene="rplT"
                     /locus_tag="U0308_002496"
     CDS             1707..2066
                     /gene="rplT"
                     /locus_tag="U0308_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEM2317452.1"
                     /translation="MPRVKGGTVTRKRRKKIVKLAKGYYGSKHLLFKVANQAVMKSYQ
                     YAYRDRRQKKRDFRRLWIARINAAARMQDLSYSKLMHGLKLAGIDINRKMLADLAVND
                     IASFNTLADSAKKALAK"
     gene            complement(2107..2862)
                     /gene="xth"
                     /locus_tag="U0308_002497"
     CDS             complement(2107..2862)
                     /gene="xth"
                     /locus_tag="U0308_002497"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEM2317453.1"
                     /translation="MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIE
                     LDLPAYKDYWNYAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEEFFMV
                     TVYTPNSQAELKRLDYRMTFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTN
                     RKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYF
                     VVSERLKDKLVDAKIHADVLGSDHCPVELELNL"
     gene            2946..3476
                     /locus_tag="U0308_002498"
     CDS             2946..3476
                     /locus_tag="U0308_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HEM2317454.1"
                     /translation="MGNYVVLLRAVNVAGKNKVNMKNLQAALQEVGFQNVITYIQSGN
                     LVLSSMLQTELEVATKITEVMKATFDLTIDVFVFSEQNYSQIIANNPFPPETIGEEER
                     WMAAFYNENIAIARQKNEQAEVIAIGRVLYIHIFSNQIHTLKLPVFLGEYKKTITTTR
                     NWRTTLQLQTLLDSQE"
     gene            3534..4766
                     /gene="pepT"
                     /locus_tag="U0308_002499"
     CDS             3534..4766
                     /gene="pepT"
                     /locus_tag="U0308_002499"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HEM2317455.1"
                     /translation="MKEELLKRFTKYVKVDTQSNEESKACPTTPGQMELANILVTELK
                     EIGMQEVTVDEFGYVMATLPSNTTKEVPVIGFLAHLDTATDLTGKNVQPQVHENYDGK
                     DIVLNKDLNVVLSPKQFPELADYKGKTLITTDGTTLLGADDKAGITEIMVAMNHLINH
                     PEIKHGKIRVAFTPDEEIGRGPERFDVEAFGAKYAYTMDGGPLGELEYESFNAAGAKI
                     TFNGNSVHPGTAKNKMVNAVKMAMEFNAHIPKDEAPEYTEGYEGFYHLISLNGDVEQA
                     KAYYIIRDFDHLKFVERKTHIASIAKELEEKYGEGSVELKLNDQYYNMREKIEPVKEI
                     VDIVSAAMRNLDIEPKISPIRGGTDGAQLSYKGLPTPNIFGGGENFHGKFEYVALESM
                     VKATEVIIEVARLFEEKE"
     gene            complement(4785..5147)
                     /locus_tag="U0308_002500"
     CDS             complement(4785..5147)
                     /locus_tag="U0308_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317456.1"
                     /translation="MYETMIAKAGVRELLGMDTSLIYGSFAYKMEGEWMDLTGLWISN
                     ADALIFYLENEDVYLLKKFDYERIEKVEQKVSILSMTKKLILHLNNKESYTLLVANGE
                     AKVFTARVNERIEKVSLG"
     gene            complement(5197..5970)
                     /locus_tag="U0308_002501"
     CDS             complement(5197..5970)
                     /locus_tag="U0308_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317457.1"
                     /translation="MFAFENVCLKRDNKMILSDINWVVNDKENWAILGLNGSGKTTLL
                     QLLNGYLWPSSGNLQVLGHVFGQTSLPELRKSIGWVSNALDHQLKEYEFSEQIVLSGK
                     FASIGIYEKVTTAEIDQAKKLLTDCGGSTLIGKPYKILSQGERQIVLIARALMASPKL
                     LILDEPCNGLDLFAKERLLERIKKIAELPESPTMLFVTHHTEEILPCFDNIILLRDGE
                     ITHHGKTENLLTEEVLQDFYQKPVELIRIKDGSIAVYPK"
     gene            6039..6644
                     /locus_tag="U0308_002502"
     CDS             6039..6644
                     /locus_tag="U0308_002502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEM2317458.1"
                     /translation="MKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQATE
                     GGDKFAIELAALFHDYNDSKLTSDPAQATEVITHWMKGKEIPEEVISKIIRIIQSVSF
                     KNGKNPTQASTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANRDHPENTTLQH
                     FYDKLLLIQKQLKTKTGRELAGEKQKIMQEFIHALEKELKI"
BASE COUNT         2406 a         1301 c         1216 g         1864 t
ORIGIN      
        1 gaattccaag tgcttgttta tctcgtttgt ttgtagataa caacgaactc cgagatactg
       61 actcgcttat tcatttgaaa aatctagaaa tcttatctat tcgtaataat aagctaaaaa
      121 gtattgtgat gcttggcttt ttatctaaac tagaggtatt agatttgcat ggtaatgaaa
      181 taacaaatac aggtggacta actagattga agaaagttaa ctggatagat ttaactggtc
      241 agaaatgtgt gaatgaacca gtaagatacc aaccagaatt gtatataaca aatactgtca
      301 aagacccaga tggaagatgg atatctccat attacatcag taatggaggg aattatgtag
      361 atggttgtgt cctgtgggaa ttgcctgttt atacaaatga agtaagctat aagtttagcg
      421 aatatataaa cgttggggag actgaggcta tatttgatgg aacagttata caacctattc
      481 agaattagga cttatgcata catgtttgat gttttgaatg gatatgcaca ctgtatactt
      541 ttagctctcg tatagtcacg agagcttttt caatatgaaa gttttaactg ccttttgaca
      601 gaaagaacgt ttattcgtat aagattgccc agaggtaaag aaactatttt atttacaatt
      661 caccttgaca ccaaaaatcc catatgatat agtaagtaag gttattaaac aagaaagaag
      721 aagcaacccg cttctcgcct cgttaacacg aacgttttca ggcaaaaaat tcaaactttc
      781 gtcgcgtaac ttacgcgatt ttgaatgtgc gggattgctg aaaagcagcc cgttttttta
      841 tggcctccga acgaatgagt tagcaggccg cagatttgaa cagctatttt ctatcttgtt
      901 gtaacaaaat taagtggagg tggctcacca ttagcaaaga catgttggta aacgatggga
      961 ttcgtgcacg tgaagtaaga ttgatcgacc aagacggtga acaattaggc gtgaagagta
     1021 aaatcgatgc gcttcaaatt gctgaaaagg ctaatcttga tctagtgctt gttgctccaa
     1081 cagcgaaacc gccagtagct cgtatcatgg actacggtaa attccgtttt gaacaacaga
     1141 agaaagataa agaagcccgt aagaaccaaa aagtcatcgt gatgaaagaa gttcgtttaa
     1201 gtccaacgat tgacgaacat gacttcgata cgaagctacg taatgcacgt aaattccttg
     1261 aaaaaggcga taaagtaaaa tgctctatcc gttttaaagg tcgtgccatt acacacaaag
     1321 aaatcggtca gaaggtgctt gaccgttttg caaaagcgtg cgaagacctt tgtacaattg
     1381 agcaaagacc aaaaatggac ggacgttcca tgttcttagt cctagcacca cttcatgaaa
     1441 agtaaagttt tgaggaggaa aaattcatgc caaaaatgaa aacccaccgc ggttccgcta
     1501 aacgtttcaa gagaacagga tctggaaaat taaaacgcag acacggcttc actagccata
     1561 tgttcgctaa caaatcccaa aaacaaaaac gtaaattgcg taaatctgca atggtatcag
     1621 ctggcgactt caaacgtatt cgtcaaatgg tcgctaaaat gaaataagag aaacaacatt
     1681 tttgtaaatt ctaggaggta gacaatatgc cacgcgtaaa aggcggaaca gtaacacgca
     1741 aacgtcgtaa aaagatagtt aaattagcca aagggtatta tggctctaaa catttattat
     1801 tcaaagtagc taaccaagcg gtaatgaaat cttaccaata tgcttataga gatcgtcgtc
     1861 aaaagaaacg tgatttccgt agattatgga tcgcacgtat caatgcggca gctcgtatgc
     1921 aagatctttc ttacagcaaa ttaatgcacg gcttaaaatt agctggtatt gatattaacc
     1981 gtaaaatgct tgcagactta gcagttaatg atatcgcatc attcaacaca cttgctgatt
     2041 cagcaaaaaa agcattagct aaataattca aaaatcctca ctctttggag tgaggatttt
     2101 tttaggttat aaattaagtt ctagctcgac aggacaatga tccgaaccaa gcacatccgc
     2161 atgaattttg gcatccacta acttatcttt caaacgttcc gatacaacaa aataatcaat
     2221 ccgccaacca gtattcctag cacgcgcgtt cattcggtaa gaccaccaag aataagcatc
     2281 ggtcaaatct gggtaaaaat aacggaaact atcaataaat ccagcatcta aaaatgcaga
     2341 aaatttcgcg cgttcctcat ccgagaagcc agcattttta cgatttgtct tcggattttt
     2401 taaatcaatt tcttcgtgcg caacattcaa atcgccacaa agcacaaccg gcttcgtttt
     2461 atccaagttt tttacatatt ccaaaatcgc atcctcaaac gtcatccggt aatctaatcg
     2521 ttttaattca gcttgcgaat tcggcgtata aaccgtcacc ataaaaaatt cctcaaattc
     2581 aagtgtgata acacgacctt ctgtatcatg ttcaggaacc cctaaaccat attgaactga
     2641 taacggctcc acttttgtaa aaatcgcggt accagaataa ccttttttca ccgcataatt
     2701 ccagtaatct ttatatgctg gcaaatcaag ttcaatttga ccttcttgta atttagtttc
     2761 ctgcaaacaa aaaatatccg catctacttc ttcaaaatac tccaaaaagc ctttttttac
     2821 agctgctcga agcccgttta cattccaaga aattaatttc acctaaaaaa cctcccatcg
     2881 ctaatagcct tattataacg taagtcacat gctataatgt agttaaacga ttgggaggga
     2941 gatagatggg gaattatgta gtgttattaa gagcagtaaa tgttgctgga aagaataaag
     3001 taaatatgaa aaatctacaa gctgctttgc aagaagtagg tttccaaaat gtcattactt
     3061 atatccaaag cggcaacctc gttctaagct ccatgttaca aacggaacta gaagtagcga
     3121 caaaaataac cgaggtaatg aaagcaacgt tcgatttaac tattgatgta ttcgtatttt
     3181 cggaacaaaa ttatagccaa atcatcgcaa acaatccatt tccaccagaa acaattggcg
     3241 aggaggaacg ctggatggcc gctttctata atgaaaatat cgctattgcg agacaaaaaa
     3301 acgagcaagc cgaagtaatc gcgattggtc gcgttcttta tatccacatt ttctccaacc
     3361 aaatccacac cttaaaatta ccagttttcc ttggcgaata taaaaagaca ataacaacaa
     3421 cgcgcaattg gcgaacaacc ctccaattac aaacactact cgacagtcag gaatagaatt
     3481 tttcgaaaat caagtttata atgaaaaaga atcaatttaa gggagtggtc ggaatgaaag
     3541 aagaactatt aaaacgattt acgaaatatg taaaagtaga tacacagtca aatgaagaaa
     3601 gtaaagcttg tccaacaaca ccaggtcaaa tggaactggc aaacattctc gttacagaac
     3661 taaaagaaat cggtatgcaa gaagttactg ttgacgaatt tggttatgtt atggcaacac
     3721 ttccttctaa tacaacgaaa gaagttccag taatcggatt tttagctcat ttagatacag
     3781 cgacggactt aacaggcaaa aacgtccaac cacaagtcca cgaaaattat gatggtaaag
     3841 atatcgttct aaacaaagac ttaaacgtgg tactttcacc aaaacaattt ccagaactag
     3901 ctgattataa agggaaaaca ctgattacaa cagatggaac aacgctactc ggtgcagacg
     3961 ataaagcggg cattaccgaa attatggtgg caatgaacca tttaattaac catcccgaaa
     4021 tcaaacacgg taaaattcgt gttgctttca caccagatga agaaattggc cgaggaccag
     4081 aacgttttga tgtagaagca tttggcgcaa aatatgctta tacaatggac gggggcccac
     4141 ttggagaact agaatatgaa agttttaacg ctgcaggtgc caaaatcact tttaatggta
     4201 atagtgttca ccctggtaca gcaaaaaaca aaatggttaa tgctgtcaaa atggcaatgg
     4261 aattcaatgc acacattcca aaagacgaag cgcctgagta cacagaaggt tacgaagggt
     4321 tttatcattt aatttcctta aacggtgatg tagagcaagc caaagcctac tatattatcc
     4381 gcgatttcga tcatttgaaa tttgtggaaa gaaaaacaca tattgctagt atcgccaaag
     4441 agttagaaga aaaatacggc gaaggatcgg tagaattaaa actgaacgat caatattaca
     4501 atatgcgcga aaaaatcgaa ccagtaaaag aaattgtgga tatcgtcagc gcggcgatga
     4561 gaaatctaga cattgaaccg aaaatcagcc caattcgtgg cggaacagac ggcgctcaac
     4621 tttcctacaa aggactacca acacctaata tttttggtgg aggagagaac ttccacggta
     4681 aatttgaata tgttgcatta gaaagtatgg ttaaagcaac agaagtaatc attgaagtgg
     4741 ctcgtttatt tgaagaaaaa gaataataaa aaagtgagtc tagttcatcc tagactcact
     4801 ttttctatgc gctcatttac tctagcagta aagacctttg cttcgccgtt tgcaacaagt
     4861 aacgtatagc tttctttatt attaagatgt aaaatcaatt ttttcgtcat ggaaaggata
     4921 cttacttttt gttctacttt ttctattctt tcataatcga atttcttcag taagtagaca
     4981 tcttcatttt ctaaataaaa aatcaacgca tctgcatttg aaatccaaag tcccgttaaa
     5041 tccatccatt cgccttccat tttataagca aatgaaccat aaatcagact agtatccatc
     5101 ccgagaagct cacgtacacc tgcttttgca atcatcgttt catacaaaac atttcgcccc
     5161 tctacatacg catttttcgt attctaacta taccatttac ttcggataga ctgcaatgga
     5221 gccgtctttt atccgaatta attctactgg cttttgataa aaatcttgaa gaacttcctc
     5281 tgtcaaaaga ttttctgttt ttccgtgatg agttatttcc ccgtcacgca gtaaaatgat
     5341 attatcgaag cagggaagaa tttcttccgt atggtgagta acaaaaagca tcgttgggga
     5401 ttctggcagt tccgctatct tcttaattct ttctaataag cgctcctttg caaatagatc
     5461 aagcccatta caaggttcat ctaaaataag taacttagga cttgccatta aagcacgtgc
     5521 aattaaaaca atttgacgct ctccttgcga taaaatttta tacggctttc caataagtgt
     5581 gctaccgcca caatcggtaa gcagcttttt cgcttggtca atctccgcag tagtgacttt
     5641 ctcataaatg ccaatacttg caaatttccc actaagtaca atttgctcgc tgaactcata
     5701 ctctttcagc tgatgatcaa gcgcattact aacccaacca atcgatttac gtaactctgg
     5761 caaagaggtc tgtccaaaaa catgcccaag tacttgaaga tttccactgc taggccaaag
     5821 atacccattt aaaagttgca acaaagttgt ttttccagaa ccgtttagtc cgagtattgc
     5881 ccagttttcc ttatcattaa ccacccaatt aatatccgat aaaatcattt tattatcacg
     5941 ctttaaacaa acattctcaa aagcaaacat cgaatacccc atttccattt tctactattg
     6001 tacatgaaaa taacgtaaaa aaggagccaa tactaatgat gaagcaagaa gaaataataa
     6061 ttgcagcgca aaaatggatg caatcccatt tcgaaaagga aactactgga cacgactggg
     6121 aacatattaa acgagtctgg catttaagta aacaaatcca agcaacagaa ggcggagata
     6181 aatttgcaat cgaattagca gcattgtttc acgactataa tgatagcaaa ctaacatcag
     6241 atccagcaca agcaacagaa gtaatcacgc attggatgaa aggaaaagaa attcctgaag
     6301 aggtaatcag taaaatcatc cgaatcatcc aatcagtctc atttaaaaat gggaaaaatc
     6361 ctacccaagc ttctacaata gaagaaaaaa tagttcaaga tgcagaccgc ttagatgcaa
     6421 ttggtgcaat tggtatagct agaacattta catacggagg ggcgcacaat agagaaatcg
     6481 ctaatcgaga tcatccggaa aataccacat tacaacactt ttacgataaa ttgctcctaa
     6541 ttcaaaaaca gctaaaaaca aagactggtc gggaacttgc aggagaaaaa caaaaaatta
     6601 tgcaggaatt tatacatgca ctagagaaag aattaaaaat ataacttaaa aggcttgtat
     6661 ttaatataaa gctgttatat aatgataaag ctgaattgat acaaattaat tcatcaaaaa
     6721 cattttaaaa atagttgttg acgtgatttc aactttatgg taagatttaa aagttgcgtt
     6781 aacaaag
//
LOCUS       DASDYK010000121         6777 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.121, whole genome shotgun sequence.
ACCESSION   DASDYK010000121 DASDYK010000000
VERSION     DASDYK010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6777)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6777)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6777
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.121"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            74..1483
                     /locus_tag="U0308_002503"
     CDS             74..1483
                     /locus_tag="U0308_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated endopeptidase"
                     /protein_id="HEM2317459.1"
                     /translation="MKKATIAATAGIAVTAFAAPTIASASTVVVEAGDTLWGIAQSKG
                     TTVDAIKKANNLTTDKIVPGQKLQVNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITS
                     IKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTDKVASTPVAPTQEVKKETTTQQ
                     AAPAAETKTEVKQTTQATTPAPKVAETKETPVVDQNATTHAVKSGDTIWALSVKYGVS
                     VQDIMSWNNLSSSSIYVGQKLAIKQTANTATPKAEVKKEAPAAEKQAAPVVKENTNTN
                     TNTTTEKKETTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNNTNTSTPSKNTNTN
                     TNSNTNANQGSSNNNSNSSASAIIAEAQKHLGKAYSWGGNGPTTFDCSGYTKYVFAKA
                     GISLPRTSGAQYASTTRISESQAKPGDLVFFDYGSGISHVGIYVGNGQMINAQDNGVK
                     YDNIHGSGWGKYLVGFGRV"
     gene            1571..2755
                     /locus_tag="U0308_002504"
     CDS             1571..2755
                     /locus_tag="U0308_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HEM2317460.1"
                     /translation="MKNLVKVKVFPKFTKGYKEGYPLILKERMEKWPKELQEGDVLEL
                     TDTNGQFIARGYHGEQNKGSGWLFTWDKKQQLDEDFLTNLITTAIEKRQFLFADDSTT
                     AFRIFNGEGDGLGGFTVDFYDGYLVIQWYSLGIYAFQKMIIDIFLSFPEIKGIYEKRR
                     FQEDTKDDFVAGQKATFPLIIKENGINYATYLDDGWMTGIFLDQRDVRRRISEDYSVS
                     KNVLNTFSYTGAFSVAALFGGASKTTSVDVAGRSLSKTKEQLEVNGLDPNEQAIIVED
                     VFHYFKYAARKQLTFDLVVVDPPSFARTKKVTFRAAKDYPAMLREIIDITAPNGTIIA
                     STNYAGFGMKAFKKLIAEAFQTSDRTYKIVETHSLPADFTVNKNFPEGNYLKVLFLTL
                     DI"
     gene            complement(2786..3442)
                     /locus_tag="U0308_002505"
     CDS             complement(2786..3442)
                     /locus_tag="U0308_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2317461.1"
                     /translation="MFAYDIYEPIGRKDEDTFPVIFALHGFGGDELEMAGRLELLMDR
                     FVVVSMRGDVEYGPAYGFYHMVTEGDPNPQEVDYISLRVAQFIDKICTDYISIDKEQV
                     FLAGFDQGAVLTISIMQSYGGQYKAAALLSGRLPYYMEERPANLMLKDKRIFIGHGIE
                     DAVIQISEADDIARLFEKMGCHVEKHRYFIGHNVNEAEEDDLYRWFESFLPNQPVKNK
                     "
     gene            complement(3464..3673)
                     /locus_tag="U0308_002506"
     CDS             complement(3464..3673)
                     /locus_tag="U0308_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317462.1"
                     /translation="MANIEYEIIEEIGVLSENARGWRKELNKISWNGRPPKYDIRDWS
                     ENHEKMGKGITLTDEEAEVLKKLLD"
     gene            3838..4590
                     /locus_tag="U0308_002507"
     CDS             3838..4590
                     /locus_tag="U0308_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HEM2317463.1"
                     /translation="MSTETTDYLLETCLMAGKIMMESGAEMYRVEDTMNRIATIASNK
                     KGISFVTPTGLFMSLEGERNVQLQQIPTRTINLEKVSMVNEFSRDFAEKRISLKELHT
                     KLVNLDKDVRYFPIWLQIIAASLVSGSLMVIFGGGWFDFIPTCIIGAIGFIIFYYTQI
                     FMKVKFLAEFLASLSVGLLAVLTISIGWGINLDTMIIGGVMPLVPGVPITNAVRDLIA
                     GHLLSGMARGTEALLTSCAIGIGIAVVFRFFL"
     gene            4604..5062
                     /locus_tag="U0308_002508"
     CDS             4604..5062
                     /locus_tag="U0308_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEM2317464.1"
                     /translation="MDLVWTIIIQLVLSYVATVTFAIITNVPKRALNACGITGTFGWM
                     AYWTLMQMDSGTGASSLAGAFVVAVLSHFFAKYKKLPITIFNVPGIVPLVPGGLAYQA
                     VRNFVLGDYTEAIGFSVQVTVVAGAIAAGLMLSEVFNHSIRTFRERKERI"
     gene            complement(5117..6580)
                     /locus_tag="U0308_002509"
     CDS             complement(5117..6580)
                     /locus_tag="U0308_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2317465.1"
                     /translation="MKKKYILCLFAVMLFCTGFLFGNSQVDAAETDTSNVTYKYIDIS
                     TLTETQKNSIIKGKPNETLTNDYENYSFVYQKNTSGPTTNTDNTSDNNKDQNGTLLKA
                     GDVGPNIYLVILGFILLGSGIGLLTLKKRHAKQLLVFLLVLGGSSLLVGSIVQATENS
                     NLKTQESQTVVKGTKETKQPESIAGYTYVGYIHTSKNNTAPPVEKGIVTVNYQDEQGN
                     SVAATETLEGDIGKPYQTSMKNIEGYTWKEVKGEATGTFTEKAQVVTYVYQKVSVATV
                     TVRYLDQDGKPIHEPQTISGNVGEPYDASTDKYKLQIDGYVLDTTKLPNNANGTFTNQ
                     ATQVTYIYTKEAQDVTITIKFVDNNGNPFVLTDLTTYKNGDLVPVYPNLDQYHMRLNY
                     NQQIYSQGEAVSDIVLSAKEGETYSLPERMTFNIIDDKGNEIPYVISQNPDFSSSGIE
                     KWENYRSIPANHEGTLTGENVVVTYQIFVYGVMIPAP"
BASE COUNT         2098 a         1299 c         1259 g         2121 t
ORIGIN      
        1 caatataaaa ttaattctca aatacttaat tacgtactgg gattttctga aaaaagagag
       61 gagttttatg aatatgaaaa aagcaactat cgcggctaca gctgggattg cggtaacagc
      121 atttgctgct ccaacaatcg catccgcaag cactgtagta gtcgaagctg gtgatactct
      181 ttggggtatc gcacaaagta aagggactac tgttgacgca attaaaaaag caaacaattt
      241 aacaacagat aaaatcgtac caggtcaaaa attacaagta aatgaggttg ctgctgctga
      301 aaaaacagag aaatctgtta gcgcaacttg gttaaacgtt cgtagtggcg ctggtgttga
      361 taacagtatt attacgtcaa tcaaaggcgg aacaaaagta actgttgaat caaccgaatc
      421 taatggctgg aacaaaatta cttacaacga cggggaaact ggtttcgtta acggtaaata
      481 cttaactgac aaagtagcaa gcactcctgt tgcaccaaca caagaagtga aaaaagaaac
      541 tactactcaa caagctgcac ctgctgcaga aacaaaaact gaagtaaaac aaactacaca
      601 agcaactaca cctgcaccta aagtagcaga aacgaaagaa actccagtgg tagatcaaaa
      661 tgctactaca cacgctgtta aaagcggtga cactatttgg gctttatccg taaaatacgg
      721 tgtttccgtt caagacatta tgtcatggaa taatttatct tcttcttcta tttatgtagg
      781 tcaaaaactt gctattaaac aaacagccaa cacagctact ccaaaagcag aagtgaaaaa
      841 agaagctcca gcagctgaaa aacaagctgc accagtagtt aaagaaaata ctaacactaa
      901 cacaaatact actacagaga aaaaagaaac aacacaacaa caaacagcac ctaaagcacc
      961 aacagaagct gcaaaaccag ctcccgcacc atctacaaac acaaatgcta ataaaacgaa
     1021 tacgaataca aacaatacta atacaagtac accatctaaa aataccaata ctaatacaaa
     1081 ctccaatacg aatgctaatc aaggttcttc taacaataac agcaattcaa gtgcaagtgc
     1141 cattattgct gaagctcaaa aacaccttgg aaaagcttat tcatggggtg gtaacggacc
     1201 aactacattt gattgctctg gttacactaa atatgtattt gctaaagcgg gaatctccct
     1261 tccacgtact tctggcgcac aatacgctag cactacaaga atctctgaat ctcaagcaaa
     1321 acctggtgat ttagtattct ttgactatgg tagcggaatt tctcacgttg gtatctacgt
     1381 tggtaatggt caaatgatta acgcgcaaga caatggcgtt aaatacgata acatccacgg
     1441 ctctggctgg ggtaaatatc tagttggctt cggtcgcgta taattaataa cttaaagtaa
     1501 cctgtggagc aagcagttcg cttcacaggt tttttgttgg aaattttatc ttaatgaaag
     1561 acggtgcatg atgaagaatc tagtaaaagt aaaagttttt cctaagttca caaaaggcta
     1621 taaggaaggt tatcccctta ttcttaaaga gcgtatggaa aaatggccaa aagaattaca
     1681 agaaggcgac gtattagaat taacagatac gaatggtcaa tttattgcaa gaggctacca
     1741 cggagaacaa aacaaaggca gcggctggct tttcacttgg gacaagaaac agcaactcga
     1801 tgaagacttt ttaacgaacc taattacgac agcaatcgaa aaacgtcaat ttctatttgc
     1861 agatgactct actactgctt ttcggatttt taatggcgaa ggagatggac ttggtggttt
     1921 cactgttgat ttttatgatg gttatctcgt aattcaatgg tacagtctag gcatctacgc
     1981 tttccaaaaa atgattattg atattttctt atcttttcca gaaataaaag gtatttatga
     2041 aaaaagacgt tttcaagaag atacaaaaga cgatttcgtc gccggtcaaa aagcaacttt
     2101 cccacttatt attaaagaaa atggcattaa ttatgcaact tatttagatg atggttggat
     2161 gacaggtatc tttctagatc aacgggatgt gcggagaaga attagtgagg attattctgt
     2221 ttcaaaaaat gtcttaaata cattttcgta tacaggggca ttctcggtag cagctttatt
     2281 tggtggcgcg agtaaaacga caagcgtaga tgtggctggt cgttcgctca gcaagacaaa
     2341 agaacaatta gaagtaaatg gtcttgatcc aaacgagcaa gcgattatcg tagaagatgt
     2401 tttccattat tttaaatatg cagcgcgcaa acaattaact tttgatttag ttgttgttga
     2461 tcccccaagc tttgcacgca caaaaaaagt aactttccga gcggcgaaag attaccctgc
     2521 tatgcttcgt gaaatcattg acatcactgc tccaaacggc accatcattg cttcaacaaa
     2581 ttatgcagga ttcggtatga aagcatttaa aaaattaatt gcggaggcct tccaaacaag
     2641 cgaccgtact tataaaattg ttgaaactca ttccttaccc gcagatttca cggtaaataa
     2701 aaactttcct gaggggaatt atttaaaagt gctctttctt actttagata tctaaaaaac
     2761 agcgaccgag tgcggtcgct gttttttatt tatttttcac tggttggttt ggcaaaaagc
     2821 tttcaaacca tctatataag tcatcttctt ccgcttcgtt tacattgtga ccgataaaat
     2881 aacgatgctt ctccacgtga caacccattt tctcgaaaag tcgggcgatg tcatctgctt
     2941 cagaaatttg gataacagca tcttctatac cgtgaccgat aaaaattcgc ttgtctttca
     3001 acattaagtt agcgggtctt tcttccatat aatacggcaa acgcccgctt aacaaggctg
     3061 ctgctttata ttgaccacca tagctttgca taatggatat tgttagaact gcgccttgat
     3121 caaatcctgc aagaaaaact tgttctttat caattgaaat gtaatccgta caaattttat
     3181 caataaattg tgcgacacgc aggcttatat aatctacctc ttgcgggttg ggatcacctt
     3241 ctgtcaccat atgataaaaa ccgtaagccg gaccatattc tacgtctcca cgcatggaaa
     3301 caacaacgaa acgatccatt aataattcta gtcgtcccgc catttctagc tcgtccccac
     3361 caaaaccatg aagagcaaaa atcactggaa aagtatcttc atcttttcta ccaattggtt
     3421 cgtaaatatc ataagcaaac attctcattc tttacaccag ccctcaatct aacagttttt
     3481 ttagtacttc tgcttcttca tcagttagtg taatcccttt tcccattttc tcatgatttt
     3541 ctgaccagtc gcggatatcg tatttaggtg ggcggccgtt ccagctgatt ttgtttaatt
     3601 ccttccgcca accacgcgca ttttcagata atacgccaat ttcttcgatg atttcatatt
     3661 caatattcgc caaaataatc cttatccttt ctgattctat atctaccata ctatcaaata
     3721 tttaccccaa atcacatcga aacaatcaca aattcaaaaa atgcaccctt cccactagaa
     3781 tttttgattt gattgcgtta cgattgagaa ggaataaagg gttggaggtg cttagttatg
     3841 tcgactgaaa caacagatta tttgctagaa acatgcttaa tggcaggcaa aataatgatg
     3901 gaaagtggcg ctgaaatgta tcgcgtggaa gatacaatga accgcattgc aaccatcgct
     3961 agtaataaaa aagggattag tttcgtgacg ccaactgggc tttttatgtc acttgaaggt
     4021 gagcgtaatg tacaattaca gcaaattccc acaagaacca ttaatttaga aaaagtatct
     4081 atggtcaatg aattttccag ggatttcgcg gaaaagagaa tttccttaaa agaattacat
     4141 acaaagctcg ttaatttaga taaagatgtt cgctactttc ctatttggtt gcagattatt
     4201 gcggcatcac tcgttagtgg atcgttgatg gttatttttg gcgggggttg gtttgatttt
     4261 attccgactt gtatcattgg cgctattggt tttattattt tttactacac gcagattttt
     4321 atgaaggtga agtttctagc agaattttta gcttcattaa gtgtcgggct cttagctgtt
     4381 ttgacgattt cgattggttg gggtattaat ctggacacga tgattatcgg tggcgtgatg
     4441 ccgcttgttc ccggggtgcc gattacgaat gcggttcggg atttgattgc tgggcatttg
     4501 cttagtggaa tggcacgtgg aacagaagcg ctacttactt cttgtgcaat aggaattgga
     4561 atcgcggttg ttttccgctt tttcttataa aggaggcgct ataatggatt tagtttggac
     4621 tattattatt caattagtgc taagttacgt tgcgacggtg acgtttgcga ttattacaaa
     4681 cgttccgaaa agagcgttga atgcttgtgg tattaccgga acatttggct ggatggctta
     4741 ttggacttta atgcaaatgg actctggaac aggcgcatcc tctctagcag gggctttcgt
     4801 cgtcgctgta ctcagtcact tttttgcgaa atataagaaa ttgccaatta cgatttttaa
     4861 tgttccggga attgtcccgc tcgttcctgg gggacttgct taccaagctg tgcgtaattt
     4921 tgtattaggt gattatacgg aagcaattgg cttttctgtg caagtaacag tcgttgctgg
     4981 cgcgattgcc gctggattaa tgttatcaga ggttttcaat catagtatta gaacattccg
     5041 tgagcgtaaa gaacgtattt gaaaaaaacc aatctctaat agagattggt ttttttcaaa
     5101 tacacggctt ctcactttat ggcgcaggaa tcattactcc ataaacaaat atctgatacg
     5161 taaccactac attttctcca gtaagtgtcc cttcatggtt ggctggtata cttcggtagt
     5221 tttcccactt ctcaatcccg ctactactaa agtcaggatt ttgcgaaatc acatagggga
     5281 tttcattgcc tttgtcatct attatattga aggtcattct ttctggtaag gaatacgttt
     5341 ctccttcttt agcagaaaga acaatatcag atactgcttc tccttggcta tagatttgtt
     5401 gattataatt taatctcata tggtattggt ctaaattagg ataaacaggt actaaatcac
     5461 catttttata ggttgttaaa tccgttaaaa caaatggatt tccattgtta tcaacaaact
     5521 taattgttat ggtaacatct tgtgcttctt tcgtataaat ataagttact tgcgtggctt
     5581 gatttgtgaa cgttccattc gcattgttcg gtagttttgt tgtatctaaa acataaccat
     5641 caatttgtaa tttgtattta tctgttgaag catcgtaagg ttcgccaaca tttccgctaa
     5701 ttgtttgtgg ctcgtggatt ggttttccat cttgatcgag gtatctaaca gttacagtag
     5761 ctacggacac tttttgataa acataagtaa cgacttgtgc tttttctgta aaagtcccgg
     5821 ttgcttctcc tttgacttct ttccacgtat agccctcgat atttttcata gaagtctgat
     5881 atggtttgcc gatgtcgcct tctaatgttt cagtggccgc aactgaattt ccttgttcgt
     5941 cttgatagtt taccgttaca atcccttttt caaccggggg cgctgtatta tttttacttg
     6001 tatgtatata tcctacgtat gtataccctg caattgattc gggttgtttc gtttcttttg
     6061 ttccttttac gacggtttga gattcttggg tttttaagtt actattctct gttgcttgaa
     6121 caatcgaccc aactaacaaa ctactaccgc caaggacaag aagaaatact aacagctgct
     6181 tagcgtgtct ttttttcaat gtaagaagcc caatgccact tcctaataaa ataaacccta
     6241 gaatgactaa ataaatattt gggccaacat ctccagcttt taatagtgtt ccattttgat
     6301 ctttattatt gtcagaagta ttatctgtat ttgtagttgg tcctgaagta tttttttgat
     6361 acacaaagga atagttttca taatcatttg taagtgtctc gtttggcttc cctttgataa
     6421 tactattttt ttgtgtttcc gttaatgtgc tgatatcaat gtatttatac gtgacattgc
     6481 ttgtatccgt ttcagcagca tcaacttgcg aatttccaaa aaggaaaccc gtacaaaata
     6541 acatcactgc gaataagcaa agaatgtatt ttttcttcat agtgcaatcc ctcccccata
     6601 taattaaatt ctcattttaa ctgctcactc ttcctatcaa aaagagagca aaactagcgc
     6661 ttaattaagc taaacaatta tatattaggc aaaaaacatt atcaatgagt tagaatgtgt
     6721 ctattttatg aacaaacaaa ttttcaaacc aattaaataa tcttttacta gaagtaa
//
LOCUS       DASDYK010000122         6670 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.122, whole genome shotgun sequence.
ACCESSION   DASDYK010000122 DASDYK010000000
VERSION     DASDYK010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6670
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.122"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(112..1398)
                     /locus_tag="U0308_002510"
     CDS             complement(112..1398)
                     /locus_tag="U0308_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEM2317466.1"
                     /translation="MEKITFEQVKEAVFHEKMANGLQVYLLPKQGFSKTYAVFTTNYG
                     AIDNNFVPIGETEFTKVPDGIAHFLEHKMFEKEDGDVFFKFGEKGAFTNAFTSFTKTA
                     YLFSSTSRVEENLETLIDFVQEPYFTEETVEKEKGIIGQEIRMYDDDPDFRAYFGVIE
                     NMYHNHPVKIDIAGTVESIAEINKDLLYLCYNTFYHPSNMVLFVVGNLEPEQMMDLIR
                     ANQAKKEFAEAAPIKRHFPEEPKTVAVKERKIHFPVQIAKNLVGIKEDIGSLEGQAAL
                     KQEIIGDVALEMLFGTTSDTYLKLYNEGIIDDTFGYDYTLQDSFSFVLVGGDAKDPDK
                     QTEKIKEAMKEAAKNGLNESDLALVKRKRIGQFLRSLNSPEFIANQFSQYVMKSASLF
                     DILPLLEEVTLEEVNAFVKNLDQEERTTSFQLLPEQ"
     gene            complement(1379..2671)
                     /locus_tag="U0308_002511"
     CDS             complement(1379..2671)
                     /locus_tag="U0308_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEM2317467.1"
                     /translation="MTDKIFQEKVGPVALTIVPTQKYKSNKIVFKFRAPLERETVTKR
                     ALLSILLETNSEKYPTQTAFRKQLANLYGANFYTTTAKKGNEHVLTVIFDMIDGQYVS
                     DGIHILEDAFAFIEQALFHPNVTNGAFNDETLAREKENLKSSLEGIYDDKIRFASKRL
                     VEEMFRDDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAEDAIEIFICGDVTKEEVLPL
                     IEKMAFAPRAERKGVFYTKEAPNVVRTIHEQQAINQGKLVLGYQTETLFGDDDFVALQ
                     LANGLLGGFANSKIFINVREKASLAYYASSRIDSFKGYMIISAGIDEVNYEQALKIIE
                     EQVVAMKQGNFTEDELNQTKEMLINQLLETNDQAQGLIELVYNNVLRKANLDLENWIA
                     KIKQATKEEVVAVINKIKPDTIYFLSKGGEELHGKNHI"
     gene            complement(2788..3738)
                     /locus_tag="U0308_002512"
     CDS             complement(2788..3738)
                     /locus_tag="U0308_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317468.1"
                     /translation="MTAILATIISSTLLMAGPLIFTALGGVYSERGGVVNIGLEGMMV
                     MGAFSAIVFNLTFQDTFGNLTPWISLIAAMVVGGLFSLVHAVATINFRADHVISGVAI
                     NFLATGLSLFLVKVIYDKGQTDQIKYYFGKPDIPVLSDIPVIGDIFFKNIPVMSYVAI
                     LFAIASWFIIYKTRFGLRLRSVGEHPLAADTMGIKVRWMRYQGVIISGILGGLGGAVY
                     AQSFTLDFGHATISGQGYMALAAMIFGKWNPLGAMGAAIFFGFAQCLAITGGSLPFFK
                     DIPDVYLQIAPYVLTILALVGFIGKSEAPKADGVNYIKGK"
     gene            complement(3735..4787)
                     /locus_tag="U0308_002513"
     CDS             complement(3735..4787)
                     /locus_tag="U0308_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317469.1"
                     /translation="MSKRLQALVIPVTAVILGLICGAIIMLIFGYDPIAGYSALIQGV
                     IGENFYIGETIRQATPYILVGLSVAVAFKAGLFNIGAEGQMLMGWLGSIIIAVNFDGL
                     TKWIHLPLAIITGMVFGALWAFIPGILKATLRVNEVIVTIMLNYTALYIFNYVVQNLL
                     TDGLDKTQEIHASASLQSELLQSLTDYSSLHWGILIALGFALIIWLMLNKTTFGYEIE
                     AVGFNENASQYAGMSVKKTIIFSMVIAGALAGLGGVMEGLGTYGTAYVLTSSPGIGFD
                     GIAVALLGGSSPIGIVFSAILFGALKVGALNMPAVAGVPNELVNVIIALIIFFVASSY
                     IIRWAMAKFKKGAKAE"
     gene            complement(4780..6321)
                     /locus_tag="U0308_002514"
     CDS             complement(4780..6321)
                     /locus_tag="U0308_002514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317470.1"
                     /translation="MDFVIEMLGIRKEFSGFVANDNITLQLKQGEIHALLGENGAGKS
                     TLMNVLFGLYEPDGGEIRVRGTKENINSPNKANELGIGMVHQHFMLVDKFTVAENIIL
                     GKEPSKLGVIEKKKAIEEIKEISDRYGLRVDPNAVVRDISIGMQQRVEILKTLYRGAD
                     ILIFDEPTAVLTPQEIKELIQIMRSLIKEGKSIILITHKLKEIMDVCDRVTVIRRGKG
                     MGTVNVPETTPQDLANLMVGREVVFTTEKIDAKPGKDVLEVKDLVVKESRGVESVRGL
                     NLTVRAGEIVGIAGVDGNGQSELISAIAGLSKVTSGSILLNGEHIENKKPRKITEAGL
                     GHIPEDRHKHGLVLEMSLGENIALQTYYKKPISSKGFLNHKAMYDFARELIEEYDVRA
                     SSEYVAAKSLSGGNQQKAIIAREIHRNPDFLIAAQPTRGLDVGAIEFIHRRLIEQRDN
                     GKAVLLMSFELDEIMNVSDRIAVIYEGKIVAIVDPKETTEQELGLMMAGSSKQEAEMG
                     EKEHV"
BASE COUNT         1994 a         1381 c         1117 g         2178 t
ORIGIN      
        1 tattttatct ctttatccaa aaaaaggcaa ccctttccag tctatttctt ttatgatagc
       61 atgactcagc aatttatgct attttttcta ctaaaaaaag acataatttg tttattgttc
      121 tggaagtaat tggaaacttg ttgttcgctc ttcttgatcc aaatttttaa caaatgcatt
      181 tacttcttct agggtaactt cctccaataa aggtaaaata tcgaataaag aagctgattt
      241 cataacgtat tggctaaatt ggttcgcaat aaactccgga gaattcagcg aacgcaaaaa
      301 ttgaccaatt cgtttgcgtt ttactaatgc taaatcagat tcatttaagc cgtttttggc
      361 agcttctttc attgcttctt tgattttttc ggtttgttta tctggatctt tggcatctcc
      421 accaactaat acgaacgaga agctatcttg taaggtgtaa tcatagccaa atgtgtcgtc
      481 aatgattcct tcgttgtata acttcaagta agtgtcagag gttgtgccaa agagcatttc
      541 caaggctaca tctccaataa tttcttgttt taaagcagct tggccttcta aagagccaat
      601 atcttcttta atccctacaa ggttcttagc aatttgaaca gggaaatgaa ttttacgctc
      661 tttcactgca actgtttttg gttcttcagg gaaatgacgt ttgatcggtg cagcttcagc
      721 gaattctttt ttcgcttgat tggcgcgaat caggtccatc atttgttctg gttctaaatt
      781 ccctacaaca aaaaggacca tgttgctagg gtgatagaat gtgttatagc aaagatacag
      841 taaatctttg ttaatttcgg caatcgattc aacggttcca gcaatatcga tttttactgg
      901 atgattatga tacatatttt cgattacgcc aaaataagcg cgaaaatcag gatcatcatc
      961 atacattctg atttcttggc cgataatacc tttctctttt tcaacagttt cttctgtgaa
     1021 atacggctct tgtacaaagt caatcagcgt ttccaagttt tcttccactc gagaagtact
     1081 cgagaaaaga taagctgttt ttgtgaaaga ggtaaatgca ttcgtaaacg cgcctttttc
     1141 gccaaatttg aagaatacat cgccgtcttc tttttcaaac attttatgtt ctaagaaatg
     1201 ggcaatacca tctggtactt tcgtgaattc tgtttcacca attgggacga agttattatc
     1261 aattgcaccg taatttgttg tgaatacagc ataagtctta ctaaaacctt gttttggaag
     1321 aagatacact tgtaagccat ttgccatttt ttcatgaaag actgcttctt ttacttgctc
     1381 aaatgtgatt ttttccatga agttcttctc ctcccttact taagaaataa atggtatctg
     1441 gtttaatttt attgataaca gcaactactt cttctttggt tgcttgtttg attttcgcaa
     1501 tccaattttc taagtctaag tttgctttac gcagaacatt gttatataca agttcgatta
     1561 acccttgcgc ttgatcattt gtttcaagca attgattaat aagcatttct tttgtttggt
     1621 ttaattcatc ttctgtaaaa ttgccttgtt tcattgctac tacttgttct tcaataattt
     1681 ttaaggcttg ttcgtaattt acttcatcaa ttccagctga aataatcata taacctttga
     1741 aagaatcaat tcggcttgaa gcataataag ccagactcgc tttttcgcga acgttgataa
     1801 agattttcga attagcaaat ccgccaagaa gcccatttgc aagttgaagt gcaacgaaat
     1861 catcatctcc aaataaggtt tctgtttgat aaccaagtac aagtttccct tgattaatcg
     1921 cttgttgctc atgaatagtg cgcactacat ttggagcttc ttttgtataa aaaacacctt
     1981 ttcgttcagc acgtggcgca aaagccattt tttcgataag aggcaatact tcttcttttg
     2041 ttacatctcc acaaataaat atttcgatag catcttctgc aataaattgt aagtagtatt
     2101 catataaatc tttcgctgtg atagcatcaa tgtcttctaa aacgccagct gagccaaaac
     2161 gaaactcatc atcgcggaac atttcttcta ctagtcgttt agaagcaaaa cgaattttgt
     2221 catcgtaaat accttctaaa ctacttttca agttctcttt ttcgcgagca agtgtttcat
     2281 cattgaaagc gccgtttgtc acatttggat ggaataatgc ttgttctata aaagcaaaag
     2341 catcttccaa aatatgaatt ccgtccgata catattgccc atcaatcata tcgaaaataa
     2401 cagttaatac gtgttcatta ccttttttag ctgttgttgt ataaaaatta gcaccgtaaa
     2461 gattcgctaa ttgctttctg aaagctgttt gagttgggta tttttcacta tttgtttcta
     2521 ataatattga aagtaaagcc cgtttagtta ctgtttctct ttctaatgga gcgcgaaatt
     2581 tgaaaacaat tttattggat ttatattttt gggttggaac aattgttagt gcaaccggac
     2641 caactttttc ttgaaatatt ttgtctgtca ttataatgct cctttcaagc aatgatctca
     2701 ctttcctatt gtatcttaag ttgttgccac gcacaatttt ctagcataaa aaacagccta
     2761 gaatttaatc taggctgttt actcgtatta tttaccttta atgtagttca caccatctgc
     2821 ttttggtgct tcggatttac cgataaagcc aacaagcgct aagatagtta atacataagg
     2881 cgcaatttgt aagtaaacgt ctggaatgtc tttgaagaat ggtagcgatc cgccggtaat
     2941 tgccaaacat tgcgcaaatc cgaagaaaat agctgccccc attgctccaa gtgggttcca
     3001 tttaccaaaa atcatcgctg caagggccat ataaccttga ccggaaatag ttgcgtgtcc
     3061 gaaatcaagt gtaaaggatt gggcgtaaac cgcgccacct agaccgccaa ggataccaga
     3121 aatgataacc ccttggtatc tcatccagcg aactttgatt cccatcgtat ctgctgcaag
     3181 aggatgttcc cctacagaac gaagacgaag accaaaacgc gttttataaa taataaacca
     3241 agatgcgatt gcaaatagaa tcgccacata actcattacc ggaatgtttt tgaagaaaat
     3301 atcaccaata actggaatat cacttaaaac aggaatatcc ggtttaccaa agtagtactt
     3361 aatttgatct gtttggcctt tatcataaat tacttttaca aggaataaag atagaccggt
     3421 tgctaaaaag ttaatcgcta caccactgat tacgtggtca gcgcggaagt taatagttgc
     3481 aacagcatgt acaagagaga ataatccccc aacgaccatc gccgcaataa gtgaaatcca
     3541 aggagttaaa ttgccgaaag tgtcttggaa agtaaggtta aagacgatag cagagaatgc
     3601 tcccataacc atcatacctt ctagtccaat attaaccaca ccgcctcgtt ctgaataaac
     3661 gcccccgaga gcagtaaaaa ttagtgggcc tgccataagc agtgtactag aaataattgt
     3721 cgctaaaatg gctgtcattc tgctttcgcc cccttcttaa attttgccat cgcccagcgg
     3781 ataatgtagc tggatgccac aaagaagata atcagagcga taattacatt gaccaattcg
     3841 tttggaacgc ctgcaactgc tggcatgttt agtgctccta cttttagagc gccgaacaag
     3901 atggcagaga agacaatccc aattggagaa cttcctccga gtaatgcaac ggcaataccg
     3961 tcaaaaccaa tccctggaga agaagttaat acataagccg ttccgtatgt tccaagacct
     4021 tccattacac caccaagacc agcaagcgct ccggcaataa ccatggaaaa gataattgtt
     4081 ttctttacac tcataccggc atattgcgat gcattttcgt taaatccaac tgcttcgatt
     4141 tcgtaaccaa aagtagtttt gtttaacatt aaccaaataa taagtgcaaa acctagggct
     4201 attaaaatcc cccaatgtag agacgaataa tctgtaagtg attgtaataa ttcagattgt
     4261 aaggaagcgg acgcatgaat ttcttgcgtt ttgtccaaac catctgtaag taaattttgt
     4321 acgacatagt tgaaaatata aagtgccgtg taattaagca tgattgttac gataacttca
     4381 ttcacacgta aagttgcttt taatatacct gggatgaatg cccaaagtgc accaaaaacc
     4441 ataccagtaa taatcgcaag tggtaaatga atccatttag ttaaaccgtc aaagtttaca
     4501 gcgatgataa tggaacctaa ccatcccatc agcatttgac cttccgcacc aatattgaaa
     4561 agtccggctt taaatgcaac tgcaacagat agaccaacta aaatgtacgg tgtagcttgg
     4621 cggattgttt caccaatata gaaattttct ccgataacac cttgaatcag agccgaataa
     4681 ccagcaattg ggtcatatcc aaaaataagc atgataatcg caccgcagat aagtccaagg
     4741 ataacggctg taactgggat aactaatgct tgtagtcgtt tagacatgct ctttctcccc
     4801 catttccgct tcctgtttgg atgaaccagc catcatcaga ccaagttctt gctccgttgt
     4861 ttctttcgga tcaacaatag caacgatttt cccttcgtat ataaccgcaa tacggtcact
     4921 tacattcatg atttcatcta attcgaacga cataagtaaa acagcttttc cattatctcg
     4981 ttgttcaatc aagcgtctat gaatgaattc aattgctcca acatctagtc cacgtgttgg
     5041 ctgagccgca attaagaaat ctggattacg gtgtatctcc cttgcaataa ttgctttttg
     5101 ttggttacca ccagaaagcg attttgctgc tacgtattcg ctacttgcac gaacatcgta
     5161 ttcttcaatt aactcacgcg caaagtcgta cattgcttta tgatttaaga agcctttgct
     5221 agaaataggt tttttataat atgtttgtaa agcaatattt tctcctagag acatttcgag
     5281 tactaaacca tgtttatgac ggtcttctgg aatatgtcct aaaccagctt ccgtaatttt
     5341 acgaggtttt ttgttttcga tatgctcgcc attaagaaga atactaccac tagttacttt
     5401 agaaagacct gcaatcgctg aaataagttc actctgacca ttaccatcga ctccagctat
     5461 tccgacgatt tcgccagctc tgacagtcaa attaagtcca cgaacacttt caactccgcg
     5521 gctttctttc acaactaaat cttttacttc taaaacatct ttgccaggtt tggcatctat
     5581 tttctctgtt gtaaagacca cttcacgacc aaccattaaa ttagccaaat cttgtggtgt
     5641 tgtttccgga acattaacag tacccatacc tttaccacgg cgaataacag ttacacggtc
     5701 acaaacatcc atgatttctt ttagtttatg tgtgattaaa atgatggatt tgccttcttt
     5761 aataagggaa cgcataattt ggattaattc tttgatttct tggggtgtca aaacagctgt
     5821 tggttcatca aaaatcaaga tatctgcacc acggtaaagc gtttttagaa tttccacacg
     5881 ctgttgcata ccgattgaaa tatctcgtac aactgcattt ggatcaacgc gtaagccgta
     5941 acgatcagaa atttctttaa tttcttcaat cgcttttttc ttttcgataa caccgagttt
     6001 gcttggctct ttaccaagga tgatgttttc tgcaaccgtg aatttatcca ctaacatgaa
     6061 atgttgatgg accattccga ttccaagctc atttgctttg ttcgggctat tgatattttc
     6121 tttcgtacca cgaacacgaa tttcgccacc atctggttca tataaaccaa acaagacatt
     6181 cattagcgta gatttacctg cgccattctc acctaacaaa gcatgaattt ctccctgctt
     6241 taactgtaag gtaatgttat catttgctac aaatccagag aattccttcc tgattcctaa
     6301 catttcaata acaaagtcca cttcttcact ccccttgtcg tctggttcaa actggaaaaa
     6361 cagccacacg cgcgattctc tcgaaggacg ccgcctctcc ccgtacttcc tcccgaagaa
     6421 ggttccgagt tttttatccg tttgttgttc aatgactttt cagcttaaat actttggtat
     6481 gttgtaaaat gcgatttata ataccatcta tgtacgaaag tttactttgc atttttaagc
     6541 tattaaaaaa gccatctcct tattttattt ctaaatggca ttcattgcaa tcataaattc
     6601 caatataccg attattttct tttagtaaaa gggtttacct atcaaattaa aacgcttaca
     6661 aattattttt
//
LOCUS       DASDYK010000123         6665 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.123, whole genome shotgun sequence.
ACCESSION   DASDYK010000123 DASDYK010000000
VERSION     DASDYK010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6665)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6665)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6665
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.123"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            191..1045
                     /locus_tag="U0308_002515"
     CDS             191..1045
                     /locus_tag="U0308_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEM2317471.1"
                     /translation="MTNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLR
                     AENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMA
                     RLFGVKHINCGLLEKIPEEQIIVALGELCDRAEELIIGLEFMPYSGVADLQAAWRVAE
                     ACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDR
                     LAPGEGYGDTVGFAKILKEHGVNPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDE
                     AWPEISPR"
     gene            1114..3039
                     /locus_tag="U0308_002516"
     CDS             1114..3039
                     /locus_tag="U0308_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEM2317472.1"
                     /translation="MKFNSMFSPIDIGPMKVPNRFVVSPMCNNYANTDGTLSDTSLAY
                     YKERALGGFGLITFEATVVDVRAKGGANKACLYSDHQIASFKRVIDVCHDAGAKISVQ
                     LQHAGPEGNSKVSGYPLRAASAIASAAGRNTPEAISREELYELIELYGEAALRAKKAG
                     ADAVEVHCAHGYLVSSFLSARTNKRVDEFGGCFENRMRLPRLIIESIRKRVGHSIAIL
                     CRINSTDGVEGGLSVQDSATVAAYLEDCGLDGLHVSRSVHIRDEYMWAPTVLHAGFSS
                     DLVTQIKRAVSIPVITVGRFTEPHYAELMVREGRADLVAFGRQSLADPETPNKAAAGK
                     LDELLPCIACLQGCVANMYAGKPITCLVNPLLGRESEAYSPKTPSKKVVVIGGGVGGL
                     YAGWMAGSRGHDVTVYEASDMIGGQMRLAAYPPGKGDLTNMVRSYIKKCEQFDVEIKT
                     NTPVTPELIQEVAPDAVIIATGATPLVLPIPGIEDAGLIHAVDLLDGKEKCGQKVLVV
                     GGGMVGSETAAFLGEAGHDVTVVELRDEVGADVISEHRKFLMRDFDEYKIKSVTNAKV
                     TSFFEDGVTYSLADNKEHRIDGFDSVVLAMGSRAYNPLEEAIKKMVPETYVIGDAIRA
                     RRALDATKEALDAVLQL"
     gene            3098..3967
                     /gene="aroE"
                     /locus_tag="U0308_002517"
     CDS             3098..3967
                     /gene="aroE"
                     /locus_tag="U0308_002517"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEM2317473.1"
                     /translation="MENRISGTTRLLGLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAF
                     DTPIEKVADTIKAIKTFNLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNEDGK
                     LTGHITDGLGFIANLRDASVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKD
                     AFYDKAKQTAASIKQEVPNCIVHIYDLNDTEKLTAEIATSDILVNATLVGMHPNEHET
                     PISDTSVFRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGK
                     DMPVSEVKNLYFN"
     gene            4000..5208
                     /locus_tag="U0308_002518"
     CDS             4000..5208
                     /locus_tag="U0308_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2317474.1"
                     /translation="MNAKRFYPTAIALYFTYFIHGIGVSILGQYKQDFAGVWGADKLS
                     DGTFDVSMVIAVIAALGLGRLLTLPISGPFSDKFGRKPSALIGVALYAVYFIGLAFAP
                     NMYIAYAFAFVGGAANSFLDTAVTPSVLEIFTKNGAIANMFTKFSISIGQFVLPFAIG
                     MVAAANMSFRTLFVITMVLIVIDGLIIAFMPFPPMNNNVGGEKAKPEKMKFNATSWAI
                     IGIGFTCTSTFQLWLNCNQELGKLYGMADPSKIQSFYSLGTMCAILITAVLVKKFILP
                     VRILILYPAIATLMLLIIYIVQTPTICLIGGFVIGYAAAGGVLQLAVSTANEFFPTNK
                     GKITSIVMISSSLANYIVLNVASYITKAGGIEGPKYVLLFNVAITVIGILLAIFVNMR
                     YKNESKIATK"
     gene            5368..6558
                     /locus_tag="U0308_002519"
     CDS             5368..6558
                     /locus_tag="U0308_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2317475.1"
                     /translation="MKNKYLSTSLGLYMNYFVHGMALIIIAQNIDFLSQKWHTDLAGA
                     AGVVSSFGIGKLLAVFISGRLSDKFGRKLSVILGVFFYIIFLGGILLSPNTIIAYMFG
                     ISAGIANSFLDTGTYPALMEAYPKKAASANIIVKAFVQSGQFLLPFMIAFILANNLWY
                     GWSFIVLIVILLINLLYTLTRTFPPMTVGKPLDAAELAEEKKQKFHFSIDEICLILFG
                     FVAQTLLYIMSQWIAKYGSEVIHMTDDASRLLVSYASVGAIICVCVTFILGNRGVRTL
                     HILITYVTMTMLISFTLFAFPSEIVCIVGAFLLGYFSAGGIIQLGLTLLAEVSARGKG
                     FVTSLYTIAEGIAVFIIPLIAAAISRIDIAAIFLLNAGIALFGLALLMIVFTRKKKFA
                     RDHI"
BASE COUNT         1987 a         1247 c         1401 g         2030 t
ORIGIN      
        1 agtgaaataa actattcctt aaaaaccaat atacggtaga ataggttaac tgtccagttc
       61 cattttcaac tattgaaggc gttatcacat cagaggtttt taattaagcg gaattaattt
      121 ttttactggt gtttgtgaaa atattatcaa agtttcttgt aatttttatt atggagagga
      181 gataattttt atgacaaatg caaatggcaa cctaaaaaaa tgccccatca cgattagctc
      241 ttatacgctt ggaacagagg tatcttttcc taaacgagta aaagtcgctg cggaaaacgg
      301 ttttgacgga attggcttgc gtgcagaaaa ctatgtagat gcactagctg ccggattaac
      361 ggatgaagac atgttgcgga ttttagacga gcataacatg aaagtaacag aagtggagta
      421 cataactcag tggggaactg ccgaagatcg tacagcagaa caacaaaaga aagagcaaac
      481 aactttccac atggcgcgat tatttggcgt caaacatatt aattgtggtt tgcttgaaaa
      541 aatccctgag gaacaaatca tcgtcgcgct tggtgaatta tgtgaccgcg cagaagaatt
      601 aattattggt ttagaattta tgccatatag cggtgtagca gacttacaag cagcttggcg
      661 agtagcagaa gcatgcggcc gagataatgc gcaacttatt tgtgacacgt ggcactgggc
      721 tagagcaaac caaacagcag aatctatcaa aaacgttccc gctgatcgga ttgtttccat
      781 ccaactatgc gatgtccacg aaacgcctta caaagaactt cgtgaggaat cacttcatga
      841 tcgtctagct cctggagaag gctacggaga tacggtcggt tttgcaaaaa ttttaaaaga
      901 acatggtgta aatccacgtg tgatgggagt cgaagttatt tcagactcta tggtagcaac
      961 tggtttagag tatgccgccc ttaaagtata caatgccacg aaaaaagtat tagacgaagc
     1021 atggccagaa atttctccac gctaaacacc tactcgctta tgtgaaaata ataacgtagt
     1081 aggaagactc cctgtgaaag gaatgtgtta tttttgaaat ttaattcgat gttttcacct
     1141 attgatatcg ggccgatgaa ggtgcctaac agatttgtcg tatcgccaat gtgtaacaac
     1201 tatgcaaata cagatggaac tttatcagat acttcccttg cttattacaa agaacgagcg
     1261 cttgggggtt ttgggcttat tacttttgaa gcaacggttg tagatgtacg cgcaaaaggt
     1321 ggcgcaaata aagcatgcct atatagtgat catcaaattg ctagttttaa acgagtgatt
     1381 gatgtatgtc acgatgctgg agcaaaaatt tctgttcagt tacagcacgc tggaccagaa
     1441 ggaaattcca aagtatctgg ttatccttta agagcagcct cagcaatcgc ctctgctgca
     1501 gggcgtaata ctccggaagc catttcgcgt gaagaacttt atgagttgat tgaactttac
     1561 ggagaagctg ctttacgagc aaaaaaagcg ggcgccgatg cggttgaagt tcactgcgca
     1621 catggttatc tagtaagtag tttcttatct gcacggacga acaaacgtgt ggacgagttt
     1681 ggtggctgtt ttgaaaaccg aatgcgatta cctcggctta ttattgaaag tattcgtaaa
     1741 cgtgtcggtc attccatcgc aattctttgc cgaattaata gcacggatgg tgtggaaggc
     1801 ggactaagtg ttcaagatag cgcaacagtt gcagcttatt tagaagattg tggtttggat
     1861 ggtttgcatg tttctcgtag cgtccatatt cgtgatgaat acatgtgggc gccaaccgta
     1921 ttgcatgcag gatttagctc tgatcttgta acacaaatca aacgcgctgt ttctattcct
     1981 gtaattactg tgggtcgttt cacagagccg cattacgcgg aattaatggt tcgtgaaggc
     2041 cgcgctgact tggttgcttt cgggcgtcag tctttagcag atccagaaac accaaacaaa
     2101 gctgctgctg gaaaactaga cgaattactt ccttgcatcg cttgtcttca aggttgcgtt
     2161 gctaatatgt atgccggaaa acccattact tgtttagtaa atccgttact tggacgtgaa
     2221 tccgaagctt attcacctaa aactccaagt aaaaaagtag ttgtcattgg cggtggtgtc
     2281 ggcgggcttt atgctggatg gatggctgga tcccgtggtc atgatgtgac agtttatgaa
     2341 gcatcagata tgattggtgg tcaaatgcgc ttagctgcct atcctcctgg taaaggcgac
     2401 ttaacaaaca tggttcgaag ttacatcaaa aagtgtgaac agttcgatgt cgaaattaaa
     2461 acaaacacac ctgtaacacc agaacttatt caagaagttg ccccagatgc cgtcattatt
     2521 gcaactggcg ccactccact tgttttgccg ataccaggta ttgaggatgc tggacttatc
     2581 cacgcagttg acttacttga tgggaaagag aaatgtggtc aaaaagtgct cgtagttggc
     2641 ggaggtatgg ttggtagtga aacagctgca tttttaggtg aagctggtca tgacgtcacc
     2701 gttgtagaac ttcgcgatga agtcggagca gacgttattt ctgaacatcg taaattcctg
     2761 atgcgtgatt tcgatgaata taaaatcaaa agtgttacga atgcaaaagt aacgagtttc
     2821 tttgaagacg gggtaaccta ttccctagcg gataacaaag aacaccgaat cgacggattt
     2881 gactctgttg ttctagcaat gggatcaaga gcctataacc cactggaaga agctataaaa
     2941 aaaatggtac ccgaaaccta tgtcatcggt gatgctattc gtgcgcgccg ggcattggat
     3001 gcaacaaaag aagcactaga cgctgtatta caattataat ttatcattct actcgctgta
     3061 atgtgcagcg agtaggattc attcggagga aaacaaaatg gaaaatagaa tttcaggaac
     3121 gactaggctt cttggcttaa ttgggacacc cgtagaccat tcaaaatctc caatcatgta
     3181 taattacagt tttcaaaaag cggggttgga ttatgcttac ctagcttttg acacacctat
     3241 tgaaaaagtt gctgatacta taaaagcaat caagacattt aatctgcgtg gcgcaaacgt
     3301 gaccatgcct tgtaaaagtg aagttttaaa acacatggat gacctttccc ctgctgctcg
     3361 gatgattggc gctgttaaca ctatcgtaaa tgaagacggg aagctaactg ggcatataac
     3421 agatggcctt ggttttattg caaatttacg agatgctagt gtagatgtca ccggcaaaaa
     3481 aatgactata attggtgctg gtggtgcagc tacagcaatc caagtccagt gtgcacttga
     3541 tggggccaag gaaatcacca tttttaatat taaagacgct ttttatgaca aagcaaaaca
     3601 aactgctgct tccattaaac aagaagtgcc aaattgcatc gtacatattt atgatttgaa
     3661 cgatacagaa aaactaactg cggaaattgc cactagcgat atccttgtta atgcgacact
     3721 cgttggcatg catccgaatg aacacgaaac acctattagc gatacatccg tttttagaaa
     3781 agaacttatc gttgcagata ttatttataa ccctaaaaaa acgcaacttc tactagatgc
     3841 tgaagctgct ggttgtaaga ctgtaggcgg gttaggaatg cttttgtggc aaggcgctga
     3901 agcatacaaa ttgtttactg gtaaagatat gccagtttca gaagtaaaga atctatattt
     3961 caactaataa attcatcagg atttcgagag gagaaaaaaa tgaacgcaaa aagattttat
     4021 ccaacagcaa tagcacttta ttttacttat tttattcacg gtattggggt atccattctt
     4081 ggccaataca aacaagattt cgccggagta tggggagcag ataagctttc tgatggcaca
     4141 tttgacgtaa gcatggttat cgcagttatc gcagcacttg gtttaggtcg cttgctgaca
     4201 ttaccaattt ctggaccctt ctcagataaa tttgggcgta aaccgtccgc attaatcggt
     4261 gttgcgttat acgcagttta tttcatcggt cttgcttttg caccgaatat gtatatcgct
     4321 tacgctttcg cttttgtagg aggagcggcg aactcattct tagacacagc cgtaacacca
     4381 tcagttctag aaattttcac aaaaaatggc gccattgcca atatgtttac taaattctct
     4441 atctctatcg gacaatttgt attacctttc gcaatcggta tggttgcggc ggcaaatatg
     4501 tcattccgca cactattcgt tattacaatg gtcttaatcg ttattgatgg cttaatcatc
     4561 gcatttatgc cattccctcc aatgaacaat aatgttggcg gcgaaaaagc aaaaccagaa
     4621 aaaatgaaat tcaatgcaac tagttgggct ataatcggta ttggttttac gtgtacatcc
     4681 actttccaac tatggctaaa ctgcaaccaa gaacttggaa aattatacgg tatggctgat
     4741 ccaagtaaaa ttcaatcatt ctactcacta ggaacaatgt gcgcaattct aattaccgct
     4801 gttctcgtga aaaaatttat tttgccagtc cgaattctaa tcctatatcc agcaattgcc
     4861 actttaatgt tgctaattat ttatatcgta caaacaccaa ccatttgctt aattggtgga
     4921 tttgttatcg gatacgctgc tgctggggga gttctacaac tagctgtatc aactgccaat
     4981 gagtttttcc caacaaacaa agggaaaatc acttcaattg tcatgatttc ttccagtcta
     5041 gcaaactata ttgttttaaa cgttgcaagt tatattacta aagctggtgg tatcgaaggt
     5101 ccgaaatatg tgttattatt caatgtagcg ataactgtta ttggtatcct actagcaatc
     5161 tttgtcaata tgcgttacaa aaacgaatct aaaattgcta ctaaataatt tattgttcaa
     5221 ctgagcattt atgatgctca gttgaactta catatcattt gtgaagtaaa gcacaaactt
     5281 atgtatttta tctatatgaa ctcactgaaa aagagggtat ttttaataaa aagtcctcat
     5341 aagtcattac ataaaggaga gcagactatg aaaaacaaat atttatctac atcacttggt
     5401 ctttatatga actactttgt tcatggtatg gcgttaatca tcattgcaca aaatattgat
     5461 tttttatctc aaaaatggca tacagatttg gctggtgctg ccggcgttgt atcttccttt
     5521 gggattggta aattattagc tgtatttatt tcgggaagac tatccgataa attcggtaga
     5581 aagttgtctg ttattctcgg cgtgtttttc tatattatct ttttaggcgg tatattactc
     5641 agtcccaata cgattatcgc atacatgttt ggtatttctg ctgggatagc aaattccttc
     5701 ttagatacag gaacctaccc cgcccttatg gaagcttatc caaaaaaagc tgcttctgct
     5761 aatatcattg ttaaagcttt cgttcaatct ggtcaattcc ttttaccatt catgattgca
     5821 tttattttag caaataactt atggtatggc tggagcttta ttgtattgat cgttatttta
     5881 ctaattaact tactctatac attaacgcga actttcccgc cgatgactgt tggaaaacca
     5941 ctagatgcag cagaacttgc cgaagagaaa aagcaaaagt ttcattttag tatagatgaa
     6001 atttgtttga ttttatttgg ttttgtggcc caaacgcttc tttatattat gagccaatgg
     6061 atcgctaagt atggttcaga agttattcat atgacagacg atgcttctag actacttgta
     6121 agttatgcta gtgtcggagc gattatttgt gtgtgtgtga cgtttatttt aggaaatcgc
     6181 ggcgtgcgaa cgctccatat cttaattact tatgtaacca tgacgatgct catctccttt
     6241 acactgtttg ctttcccaag cgaaatcgta tgtattgttg gggctttctt attgggctat
     6301 ttctctgctg gaggaattat ccaattaggt ttaacactac ttgcggaggt ttctgctcga
     6361 ggaaagggtt ttgtcactag cctttatact attgcagaag ggatagctgt tttcattatc
     6421 cccttgattg ctgctgcgat ttcccgaatt gatattgccg ctatcttctt actaaatgct
     6481 ggtattgcgc ttttcggcct cgctctctta atgattgtat ttacaagaaa gaaaaaattt
     6541 gctcgagatc atatttaaaa aagaccgaga attgattcct caattctcgg tcttttttaa
     6601 tgtttccgta acgtcttcca tttgtacatg agcatccaaa aagcaataac agatgcaact
     6661 aaaat
//
LOCUS       DASDYK010000124         6516 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.124, whole genome shotgun sequence.
ACCESSION   DASDYK010000124 DASDYK010000000
VERSION     DASDYK010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6516)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6516)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6516
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.124"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            16..1182
                     /locus_tag="U0308_002520"
     CDS             16..1182
                     /locus_tag="U0308_002520"
                     /EC_number="2.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase"
                     /protein_id="HEM2317476.1"
                     /translation="MKIGIDKIGFYTPAFYVDMVELAEARNIDPNKFTIGIGQDKMAF
                     APITQDSVTMGANAALQILDEEDLKKIDLVILATESGIDESKAGAVYIHRLLGIQPFS
                     RAIEIKEACYGATAGINLAKDYVAKHPDSKVLVIGSDIARYGLATGGEATQGAGAVAM
                     VIAADPRCITLEDDNVFYTEDIMDFWRPVYSEYACVEGKYSTEQYIHFFQTIWEKYSA
                     KFGKNLEDFAAICFHLPYTKMGKKALDTIIETAPTEVQERLLENYRLSTLYSRNVGNI
                     YTGSLYLSFISLLDNQADLQAEDKIGFFSYGSGAVGEFFHGVLQPDYKKYIRKDEHAE
                     LLANRTKLAIPDYETKFKQQLPKDGSTFEVDPASDPATIVLTGIQEHKRQYIKK"
     gene            complement(1205..1804)
                     /locus_tag="U0308_002521"
     CDS             complement(1205..1804)
                     /locus_tag="U0308_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEM2317477.1"
                     /translation="MKRYFIILILPILSIFAAVTMYFSWFQGWLYFYLKHVMATVSHM
                     GYITVGITAILLYFVTVQLVNWKTNKALLVFCYIIYFSILLCLLFGKASDTQGFSSDT
                     FGFVDTFLSGNLRVIIIGNVLAFIPIGFLLKKLGFFTALLSAGMLIFAVEGAQYMLHV
                     GFFDTGDVFLNVCGIMLGYIVIRFLSPRKYKELKVKPTS"
     gene            complement(1874..3118)
                     /locus_tag="U0308_002522"
     CDS             complement(1874..3118)
                     /locus_tag="U0308_002522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2317478.1"
                     /translation="MAYTKEEKSWIFQDWANSAYSIMITTAILPIYFKGVAASAGIAD
                     STSTAYWGYANSIGTLLISLLAPILGTIADYQFFKKRFFGIFTAIGIGFTFLLVFIPT
                     DAWLLLLGFYVLSLIGFSGANIFYDAFLIDVTTNDRMDRVSSAGYAYGYLGSCIPFII
                     FIIFQATGILPISDVALVNIGFVMTALWWLFFTIPMWKNVHQIHYIPAVKRPVRTSFK
                     RLFHTISHISEHKNIVIFLIAYFFYIDGVDTIFRMATSYGIDLGISQTTLILILLMTQ
                     LVAFPFTLLYGYLAKRFSAKPLIFTAIFVYIIICIYAVFMKSALDFWILAMLVGTSQG
                     GIQALSRSFFGKIIPKKRSNEFYGFYNIFGKFSAIMGPALMGVITQITGKTQYGVASL
                     IVLFLVGGILFVFVKEKNLENL"
     gene            complement(3137..4405)
                     /locus_tag="U0308_002523"
     CDS             complement(3137..4405)
                     /locus_tag="U0308_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEM2317479.1"
                     /translation="MEKHLFVISLDALGALDLKDTTDLPVLRELIKTGTHIQEVETIY
                     PSLTYPAHTSIITGHYPATHGIINNTKVQPEKDSPDWYWYKKAIQVPTLYDLAKEKGM
                     TTAAFLWPVAAKSGIDYNIAEIFPNRFWLTQMMVSLHASSPLFLIDMDRKFGHLRKGI
                     NQPDLDIFLTASVVDTIKAKRPRLLLTHLVDMDSMRHAHGVDSPEAKAALKRHDERLA
                     AIIQATKEAGIYENTVFAILGDHYQINVTHAIRLNVLFAEQGWMTVVDDKITEWDVYA
                     KSCDGSSYIYTKNNQHNQEIQHLLQNMAEIEEILPKEEIALRGAAPNATFMVEGRAGF
                     YFMDDLDGPVYEKVTDEMLGKPGYYKAVHGYSPKKPDYKTTIIFNGPGIKKGDKISNA
                     HLVDEAPTFAHILDLQFPNTAGSVIEAIFE"
     gene            complement(4469..5506)
                     /locus_tag="U0308_002524"
     CDS             complement(4469..5506)
                     /locus_tag="U0308_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM2317480.1"
                     /translation="MKELSSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSY
                     LITRLENFILRRISIYRQIIVLLLYVLIAAVIIFVFVKYIPVLADQINQLVKFGNTFL
                     TTDSNNDFINYIVSLANQFDIMKYTEQGVSMILTYLTNVGTVLMNVFIALMLSLFFSL
                     GKEHLVSFTNQFSTSKIGFIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALW
                     ILGFPQLMTLSIMVFLLGLIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHAL
                     ESYVLNPKLMSAKTNLPVFYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEE
                     IEQPKDTISHT"
     gene            complement(5523..6419)
                     /gene="murB"
                     /locus_tag="U0308_002525"
     CDS             complement(5523..6419)
                     /gene="murB"
                     /locus_tag="U0308_002525"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEM2317481.1"
                     /translation="MNNLQTQFPHIAIKLNEPLSKYTYTKTGGAADVFVMPKTIEETQ
                     EVVAYCHQNKIPLTILGNGSNLIIKDGGIRGVILHLDLLQTIERNNTQIIAMSGAKLI
                     DTAKFALDESLSGLEFACGIPGSIGGALHMNAGAYGGEISDVLEAATVLTQTGELKKL
                     KRSELKAAYRFSTIAEKNYIVLDATFSLALEEKNLIQAKMDELTAAREAKQPLEYPSC
                     GSVFKRPPGHFAGKLIQDSGLQGHIIGGAQVSLKHAGFIVNIGGATATDYMNLIAYVQ
                     QTVREKFDVELETEVKIIGEDK"
BASE COUNT         2137 a         1224 c         1156 g         1999 t
ORIGIN      
        1 gacttgagct tacatatgaa aattggaatt gataaaatag gtttttatac tcctgcattt
       61 tatgttgata tggtagaact tgctgaagct agaaatattg atcctaacaa gtttactatt
      121 ggtattggcc aagataaaat ggcttttgct ccgattacgc aagattcagt aacaatgggc
      181 gcaaatgcag ctttacagat tttagatgaa gaagatttga aaaaaattga tttagttatt
      241 ttggcgacag aatcaggaat tgatgagtca aaggctggcg cggtttatat tcaccgtttg
      301 ctaggtattc agccgttctc tcgtgcaatt gaaataaaag aagcttgcta cggagccact
      361 gcaggaatta atttagcgaa agattatgtt gcgaaacatc ctgatagtaa agtactggtt
      421 atcggatcgg atattgctcg ttacggcttg gcaactggcg gcgaagcaac tcaaggagct
      481 ggagctgttg cgatggttat tgctgctgat ccacgttgta tcacacttga agacgataat
      541 gtgttttata cagaagatat tatggacttc tggcgccctg tttactctga gtatgcatgt
      601 gtagaaggta aatattcgac ggagcagtac attcactttt tccaaaccat ttgggaaaag
      661 tattcagcaa aatttggcaa gaacttagaa gattttgcag ctatttgttt ccacttacca
      721 tatacaaaaa tgggtaaaaa agcgttagat actattattg aaacagctcc aactgaggtt
      781 caagaaagat tgctagaaaa ttatcgtcta agtacgcttt atagccgcaa tgtcggtaat
      841 atttacactg gttccctcta tttaagcttt atttccttgt tagacaatca agcagattta
      901 caagcagagg ataaaattgg cttctttagt tacgggtctg gtgctgttgg cgagttcttc
      961 catggagtgc tacaacctga ctataaaaaa tatatccgta aagatgaaca tgcggaattg
     1021 ttagcaaacc gtacgaaact tgctattcca gattatgaaa cgaaattcaa acaacaatta
     1081 cctaaagatg gttcgacgtt tgaagtggat cctgctagtg acccagcaac cattgtatta
     1141 actggtattc aagagcataa acgtcaatat attaaaaaat aatcaaaaaa ccgactaggc
     1201 taaatcagct agtcggtttt actttgagct ctttatattt tcttggggat aaaaaacgaa
     1261 tcacaatgta gccaagcatg ataccacaaa cattcaggaa tacatctccg gtgtcaaaga
     1321 atcctacatg tagcatgtac tgcgcccctt ctacagcgaa tatcaacatt ccagctgata
     1381 gtaatgcggt gaaaaaacct aattttttga gtaaaaaacc aattggtata aaggctaata
     1441 catttcctat gataatgacg cgtaaattac ctgataaaaa tgtatcaaca aacccaaaag
     1501 tatcacttga aaatccttgc gtgtcggaag cctttccgaa taacaaacag agtagaatac
     1561 tgaaataaat aatgtagcaa aaaacaagta atgctttatt tgttttccag tttactaatt
     1621 gtactgtgac aaaatagagt aatatcgccg tgatgccaac cgtaatgtag cccatatgac
     1681 taactgtggc cattacgtgc tttaagtaaa aataaagcca tccctgaaac caggaaaaat
     1741 acatcgtcac tgcagcaaat atagaaagga ttggtaaaat aagaattata aagtatcttt
     1801 tcatcctggc gtcctccttt tcaaaggcta cctcaaggat aacatgtgaa aataaggact
     1861 ttcttaaaag ggtttaaaga ttttctaagt ttttctcttt tacgaacaca aataaaatac
     1921 cgccaacgag gaaaagtaca attaaactag ccacaccgta ttgcgttttt ccagtaattt
     1981 gtgtgattac acccataagt gcgggcccca tgattgctga aaatttcccg aaaatattat
     2041 aaaatccgta aaactcattc gaacgctttt taggaataat ttttccgaag aatgatctac
     2101 ttaatgcttg aataccacct tgcgaagttc caactaacat cgctaatatc caaaaatcaa
     2161 gtgcagattt catgaaaacc gcataaatac aaataataat ataaacaaaa atcgcggtaa
     2221 agataagcgg ttttgcactg aaacgtttgg ctaagtatcc gtataataaa gtgaacggaa
     2281 atgcaacgag ttgtgtcatt aaaagaatta aaattaatgt cgtctgagaa atcccaagat
     2341 caatcccgta tgatgtcgcc atgcggaaaa ttgtatcaac cccatctatg tagaaaaaat
     2401 aagcaattaa aaagataaca atatttttat gttcactaat gtggctaatt gtatgaaaca
     2461 atcttttaaa actagttctg actggacgtt tcaccgctgg aatatagtga atttgatgaa
     2521 cgtttttcca catgggaatc gtgaaaaata gccaccaaag cgccgtcatc acaaaaccaa
     2581 tattgacgag tgcaacatca ctgattggca agatacctgt cgcttggaaa ataataaaga
     2641 taataaaagg aatacaactt cctaaataac catacgcata tccggcagat gacactctat
     2701 ccatccggtc gttcgttgtt acatcaatta aaaaggcatc ataaaaaata tttgcgccag
     2761 aaaagccaat taatgagagt acatagaacc ccagtaacaa tagccaggca tctgtgggta
     2821 tgaaaactaa taagaaagta aagccaatcc cgatggcagt aaaaattccg aaaaatcgct
     2881 ttttaaaaaa ttgataatct gcaatggttc cgagtatcgg agctaataat gaaataagta
     2941 atgttccaat cgagttcgcg tatccccagt acgcggtcga tgtactgtca gcaatcccgg
     3001 cactcgctgc taccccttta aaataaattg gtaaaatcgc agttgttatc atgattgagt
     3061 aggcggaatt cgcccaatct tgaaaaatcc aacttttctc ctcttttgta tatgccaagt
     3121 gtgtttctcc ccttttctat tcaaatatcg cttctatgac agagccagca gtatttggaa
     3181 attgtaagtc caaaatgtgt gcaaatgtag gcgcttcgtc aactaaatga gcattgctga
     3241 ttttgtctcc ttttttaatg ccaggtccat taaaaataat cgtggttttg taatctggct
     3301 ttttaggaga ataaccgtga actgctttat agtaacctgg ttttccaagc atttcatcag
     3361 tgactttctc gtaaaccggt ccatctaaat catccataaa ataaaaacca gccctccctt
     3421 caaccataaa agtagcatta ggagcagcac cacgaagtgc tatttcttct ttcggcaaaa
     3481 tttcttctat ttcagccatg ttttgaagta aatgctggat ttcttgatta tgttgattgt
     3541 tttttgtgta aatataactg gaaccgtcac aacttttagc gtagacatcc cattccgtaa
     3601 tcttatcgtc cactacggtc atccagccct gttcggcaaa aaggacattt aggcgtatgg
     3661 cgtgtgttac attaatttga taatgatcac ctagaatagc aaagacagta ttttcataaa
     3721 ttccagcttc ttttgtagct tggataatcg cagctaaccg ctcatcgtgt cgttttaagg
     3781 ccgcttttgc ttcaggggaa tctactccgt gcgcatgtcg catactatcc atatcaacca
     3841 aatgtgttaa aagtaatctt ggccttttcg ctttaattgt atcaactacg ctagctgtca
     3901 aaaatatatc taagtctggt tggttgattc cctttcgcag atgaccaaat tttcggtcca
     3961 tatctattaa aaataatggt gagctagcat gtaatgacac catcatttgc gttaaccaaa
     4021 agcgatttgg aaaaatttca gcaatattat aatcaattcc actttttgct gcaaccggcc
     4081 ataaaaaagc agcggtcgtc atccctttct ctttggctaa atcataaagt gttggtactt
     4141 gaatggcttt tttataccaa taccaatcag gagaatcttt ttcaggttga acttttgtgt
     4201 tattaataat cccatgagtt gcgggataat gccccgtgat aatacttgtg tgcgctggat
     4261 atgtcagtga tggataaatg gtttcaactt cttggatgtg agttcctgtc ttaattaatt
     4321 cccgtaaaac gggcaaatct gtcgtatctt ttaaatcaag tgctccaagt gcgtctaatg
     4381 aaatcacaaa aagatgtttt tccattattt tctccccctt caaaaaaaca gggattttcc
     4441 agaaaatctg gaagaacccc cgtgtgaatt acgtatgact gattgtgtcc tttggttgtt
     4501 cgatttcttc ttgattcgta acgccgagca catctaagaa gaacatcaca actggaatac
     4561 caacgattaa tccccaaata ccgaagaaat gctctccgaa aataagaata atgaaagtat
     4621 aaaaaactgg taaatttgtt ttcgctgaca taagttttgg attaaggaca taagattcga
     4681 gtgcatggat aataataaca acgactaaaa tgtagaaaat gtattccacg ccgccgatag
     4741 aataaccaat gatagttaac gggacaagag aaataatcac ccctgccact ggaatcaaac
     4801 caagcaaaaa caccattatg gataaagtca tcaattgcgg gaaacctaaa atccaaagtg
     4861 ctatcgtcgt taaaatggca ttcacaagcg caatgataaa ttgtgcttca ataactttac
     4921 caaaagtagc aacaaatttg gatccaaaga acttcacttc ttcatagata aaaccaattt
     4981 tactagtaga aaattgattc gtgaatgaaa ctaaatgttc ttttcctagt gagaaaaata
     5041 gacttaacat tagtgcgata aagacgttca tcaatacagt tcccacatta gttaaataag
     5101 ttaatatcat tgaaacaccc tgttctgtgt atttcataat atcaaattga ttcgctaaac
     5161 taacaatgta attaatgaag tcattgttgc tatctgtcgt taagaaagta tttccgaatt
     5221 tcactagttg atttatttga tccgctaaga caggaatgta cttaacaaat acgaagatga
     5281 taactgcggc gattaaaaca taaagtaaca acacaataat ttgccgataa atggagattc
     5341 tccgtaaaat aaaattctct aaacgtgtaa taaggtaaga aaaaatgaat gttagtaaaa
     5401 taatattcat ttggcttctt aataagtata aaacgaaggc aattaatata aatacgccaa
     5461 ctcgccgcac actacgattt tgtaaaaatg aactaagctc tttcaaaaat ggatgccctc
     5521 ctctatttat cttcgcctat gattttaact tctgtttcta actctacatc aaatttctcg
     5581 cgaaccgttt gttggacgta agcaattaaa ttcatgtagt cagtcgcagt tgccccaccg
     5641 atattaacga taaatccagc atgttttaaa gaaacttgcg cgccgccaat aatatggcct
     5701 tgcaagccac tatcttgaat taatttaccc gcaaagtgac ctggtggacg tttgaataca
     5761 ctaccacaag atggatactc taatggttgt ttagcttcac gtgctgcagt aagttcatcc
     5821 atttttgctt gaattaggtt tttttcttct aaggccaaag aaaaagtagc atctaatacg
     5881 atgtaatttt tttctgcaat agtactaaag cgataagctg cttttagttc tgaacgtttt
     5941 agttttttta attcacctgt ttgtgtcagc acggttgcag cttctaaaac atcactaatt
     6001 tcgcctccgt atgctcctgc attcatatgt agtgctcccc caatagatcc gggaatacca
     6061 caagcaaatt caagtccgct taagctttca tctaaagcga attttgctgt atcaatgagt
     6121 ttggcaccac tcatggcgat aatttgggta ttgtttcttt caatggtttg tagtaaatca
     6181 agatgtaaaa taacgccgcg aattccgccg tctttaatga ttagattgga accatttccg
     6241 agaatagtaa gagggatttt attttggtga cagtaggcca ccacttcttg cgtctcttct
     6301 attgtttttg gcataacgaa tacgtctgcc gcgccgcctg tttttgtata ggtatactta
     6361 gacaacggtt catttaattt aatcgctata tgcggaaact gtgtttgtaa gttattcatt
     6421 atttatttca aacctttcat ggttgtagtt taaaaatcac ttcctttatt ttatcatgga
     6481 acctctcttt tacaaagaat tccatagttt ttttct
//
LOCUS       DASDYK010000125         6474 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.125, whole genome shotgun sequence.
ACCESSION   DASDYK010000125 DASDYK010000000
VERSION     DASDYK010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6474)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6474)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6474
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.125"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..1631)
                     /locus_tag="U0308_002526"
     CDS             complement(<1..1631)
                     /locus_tag="U0308_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BspA family leucine-rich repeat surface protein"
                     /protein_id="HEM2317482.1"
                     /translation="MKKFSMRVVLIISVLFIAFGSANVSIAQERDTTNKLPEEELGSL
                     DTSNIIAEEVAQEKPAEVEQLEEIPITDELMQNPDVLEQPVADSDDTDLTVVSSGDFW
                     TIYRNTVNNEYSLCMFGNVPSSRPTAWNSYLKSIKHIEIEEATLTGSFEAYFRGTVFT
                     VLESVRIEQCNLSGVTSFDMAFYNSGIEKVIIRDNDYPTAPSLLATTYMFSLCRNLSE
                     LDLSGLDTSAVTNIYGMFQNCISLEELDLSNFDTSSVTNMYSTFSGCRSLEKLDVSNF
                     DTSSVTNMQFMFEKCSSLEELDLSNFDTSSVTTMSYMFQLCPALKSLYLDNFTDAAIM
                     TGMFGGTTSLTYLFVSHNLSTFNNLENTSWYDEKNWVQFSNLSQLQTYHRQQSEPTGY
                     RKGAFLSLTMDAMGGQFEDAEEQKVQNKVSGEYWDEIVPVKEGHYFDGWYLNQDCTNK
                     FDFSLPADASITIYAKWIENYTVIIPASISLNETSELKVEGINRGDKNLSVGLNRTAM
                     SVSESNKLTLANTADTTVQCLAPLSWDGSETNPEKA"
     gene            complement(1767..3836)
                     /locus_tag="U0308_002527"
     CDS             complement(1767..3836)
                     /locus_tag="U0308_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BspA family leucine-rich repeat surface protein"
                     /protein_id="HEM2317483.1"
                     /translation="MKKLSIRVILIVTIIFIACGSANVSIAQERDIINKLPEVELGSL
                     YTSNLITEEVAQDKPAEVENLEQAPTTDDLVQNPDVLEQPIADSDDSDLTVVNSGDFW
                     TIYRNTVNGEYSLHMFGNVPSSKPTAWNSYLNRIKHIEIEEATLTGNFSSYFRNNVFT
                     VLESVRIERSNLSRVTSFALAFYGSGIEKVIIRDNNYPTAPSLLTTEGMFKNCSNLME
                     VDLSGLDTSAVTTMWDMFNSCRALEELDVSHFDTSSVTNMSYMFYDNRNLEVLDVSNL
                     DTGSVTNMYAMFEDCTSLEELDVSHFDTSSVTDMYRVFNGCEKLKKLDVSNFDTSSAT
                     AMVQMFRNCSALEKLDVSNFNTSLVTDMRAMFAGCTSLEALDVSNFDTSSVTNMAAMF
                     SDNEKLEKLDLSTFDTSSVTNMGTMFKNCTALKSLFLDNFTHAASSTDMFTGTTSLSY
                     LFVSHNVSNFNGLENTSWYDEKNWVQFSNLSQLQTYHRKQSEPTGYRKGAFLSLTMDA
                     MGGEFEDAEEQKVQNKISGEYWEEVIPVKEGHYFDGWYLDQNFTNKFDFSLPATVSAT
                     LYAKWVENYTVVIPASISLNEATELKVEGINRGSKTLSVGLNYEETTISESNKLTLAN
                     TADTTVQCLAPLSWDGSETNPKKAILTLAPGSEITEGDAVMEIESPENIQAGKYTGNL
                     VFSINYE"
     gene            complement(3972..6125)
                     /locus_tag="U0308_002528"
     CDS             complement(3972..6125)
                     /locus_tag="U0308_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BspA family leucine-rich repeat surface protein"
                     /protein_id="HEM2317484.1"
                     /translation="MKKFSMRVVLIISVLFIALGNANVSIAQERDTTNKLPEEELSSL
                     DTSNIIAEEVAQEKPAEVENLEEIPTTDELMQNPDVREQPVADSDNPDLTVVSSGAYW
                     TIYRNTVNGEYSLHMFGNVPSSIPSAWKSYLSNIKHIEIEEATLTGSFETYFKSKIGG
                     FLALESVRIERSNLSGVTSFREAFFNPILQKVIIRDNDYPTVPSLLTMESMFENSYNL
                     TELDVSGLDTSAVTNMKNMFYKCSVLKELDLSNWDTSAVNNMNSMFGYCESLEKLNVS
                     NFDTSSVNDMHYMFRDCKALEKLDVSDFDTSSVTTMYGMFVNSTSLKELDVSNFNTSS
                     VTTMQGMFSTCRALEKLDVSNFDTSSVTTMLGMFAACNSLEELDVSNFDTSSVTNMYS
                     MFADCELLEKLDVSHFDTSSVTDMRTMFNNCQSLEKLDVSNFDTSLVTNMQGMFQNCT
                     ALKSLYLDNFTTAKTMTDMFTGTTSLTYLFVSHNLQSFYGLANTNWYDEKNWVQFSNL
                     SQLQTYHRNQSEPTGYRKGAFLSLTMDAMGGEFEDAEEQKVQNKISGEYWEEVIPVKE
                     GHYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVVIPASISLNETSELKVEGI
                     NRGSKTLSVGLNQLATSISESNKLTLANTADTTVQCLAPLSWDGSENNPENAILTLAP
                     GSEITEGDAVVEIESPENIQAGKYTGNLVFSINYE"
BASE COUNT         1956 a         1391 c         1024 g         2103 t
ORIGIN      
        1 gctttttctg gattagtttc tgacccgtcc caactcagtg gtgccaaaca ttggactgtt
       61 gtgtctgccg tattggctaa agttagcttg ttgctttcag aaacagacat tgctgttcga
      121 tttaatccca cggacaaatt tttatctcct cgattaatcc cttccacttt caattcagaa
      181 gtttcattta aagaaataga agctggaata atcactgtat agttttctat ccattttgcg
      241 tagatagtta ttgatgcatc agcgggcaat gaaaagtcaa acttattggt acaatcttga
      301 ttaaggtacc acccgtcaaa ataatgtcct tctttcacag gaactatctc atcccagtac
      361 tccccagaaa ctttattttg tactttttgt tcttccgcgt cttcaaactg cccacccatc
      421 gcatccatcg ttaaggaaag gaaggcacct tttctgtagc ctgtaggttc gctttgttgc
      481 ctgtgatatg tctgtagttg cgagagattc gaaaactgca cccaattctt ttcatcatac
      541 cagcttgtat tttctaagtt attaaaagta cttaaattgt gactgacaaa caagtaggtt
      601 agggaggtgg ttccaccaaa catacctgtc ataattgctg catccgtaaa attatccaga
      661 tataaagatt ttaacgctgg acaaagttga aacatgtaag acatagtagt cactgaactt
      721 gtatcaaaat tacttagatc taattcttca aggctactac atttttcaaa catgaactgc
      781 atatttgtaa ctgaactcgt atcaaagttg cttacatcca atttctcaag tgatctacaa
      841 cccgaaaacg tggaatacat attagtaacg gaactggtat caaaattact tagatctaac
      901 tcctcaaggc taatacaatt ttgaaacatg ccatatatat tagttacagc actcgtatca
      961 aggccactca aatcaagctc actaagatta cgacataagg aaaacatata cgtagtagcg
     1021 agtaaagatg gtgctgtcgg ataatcatta tccctaataa taactttttc aattcctgaa
     1081 ttataaaatg ccatgtcaaa agacgtcact ccagacaaat tacactgttc aattctcaca
     1141 ctttcaagta ctgtaaaaac agtacctcta aaatacgctt caaaacttcc tgtcagcgta
     1201 gcttcttcaa tctctatatg tttaatgctt ttcaaataac tattccaagc ggttggtcta
     1261 ctgcttggca cgttaccaaa catacacaag ctatattcat tgttcacagt attacgataa
     1321 atcgtccaaa aatcacctga gctgaccact gttaaatccg tatcatcgga atcagcaaca
     1381 ggctgctcca gaacatctgg attttgcatc aactcatccg taattgggat ttcttctagt
     1441 tgctccacct cggctggttt ctcttgcgcg acttcttctg caatgatatt agaggtatcc
     1501 agagaaccta gctcctcttc tggaagctta ttcgttgtgt ccctttcttg tgcgatagaa
     1561 acattagcgc tcccaaaagc aataaaaagc acagaaataa taaggaccac tcgcatggaa
     1621 aactttttca tcagctcccc tccttctttc ctaattagtt tctagatgcc gaactttcta
     1681 gctgcaattt aattatagag gagtcgaaaa gcttttccgg ccataaaatt ttaacttctt
     1741 aaaattctat ggcttgctta gcaaagttat tcataattaa tcgaaaatac taagttcccc
     1801 gtatattttc cagcctggat attttctggg gattctattt ccatgactgc atcgccttct
     1861 gttatttccg aacctggagc gagggttaaa atcgcttttt tcggattagt ttctgacccg
     1921 tcccaactca gtggcgccaa acattggact gttgtgtctg ccgtattggc caaggttagc
     1981 ttgttgctct cagaaatggt tgtttcctca taattcaaac ctacggataa agttttactt
     2041 ccacgattaa tcccttctac cttcaattca gtagcttcat ttaaggaaat agacgctgga
     2101 ataaccaccg tataattttc tacccatttg gcgtagaggg ttgctgaaac agttgctggc
     2161 aatgagaagt caaacttgtt agtgaaattt tgatcaagat accacccgtc aaagtaatgt
     2221 ccttctttta ctggaatcac ttcttcccag tactccccag aaattttatt ttgtactttt
     2281 tgttcttccg catcttcaaa ttctccaccc atcgcatcca ttgttaagga aaggaaggca
     2341 ccttttctgt agcctgtagg ttcactttgt ttccggtgat atgtctgtag ttgcgagaga
     2401 ttagaaaact gtacccaatt cttttcgtca taccagcttg tattttctaa cccattaaaa
     2461 ttgcttacat tgtgactgac aaacaagtaa gataaagagg ttgttccagt aaacatatct
     2521 gtcgagcttg ctgcatgtgt aaaattatct agaaataaag attttaacgc tgtacaattt
     2581 ttaaacatgg tacccatgtt agtcactgaa ctggtatcaa aggtacttaa atcaagcttc
     2641 tccagttttt cattatcaga aaacatggca gccatattag ttactgaact cgtatcaaaa
     2701 ttacttacat ctaacgcttc aagactagta caaccagcaa acatggcacg catatcagtt
     2761 actaagctcg tattaaaatt acttacatcc aacttctcaa gggcgctaca atttctaaac
     2821 atttgaacca ttgcagtagc ggaactggta tcgaaattac ttacatctag tttcttcagt
     2881 ttttcacagc cattaaacac tctatacata tcagttactg aactcgtatc aaaatgactt
     2941 acatccagct cttcaagact agtacaatct tcaaacatgg catacatatt agttactgaa
     3001 ccggtatcaa ggttgcttac atccagcacc tcaaggtttc tattatcata aaacatgtaa
     3061 gacatattag ttactgaact cgtatcaaaa tgacttacat ccagttcctc aagtgcccta
     3121 cagctgttaa acatatccca catagtagtt accgcactag tatcaagacc actcaaatca
     3181 acctccataa ggttggaaca atttttaaac ataccttccg tagtgagtaa agatggtgct
     3241 gtcggataat tattatctct aatgataact ttttcaattc ctgaaccata aaatgcgagt
     3301 gcaaaagacg tcactctaga tagattcgaa cgttcaattc tcacactctc aagtactgtg
     3361 aaaacattat ttctaaaata cgatgagaaa tttcctgtca aagtagcttc ttcaatctct
     3421 atatgtttaa ttctgttcaa ataactattc caagcggttg gtttactact tggcacgtta
     3481 ccaaacatat gcaagctata ttcaccgttc acagtattac gataaattgt ccaaaaatca
     3541 cctgagttta ctactgttaa atccgaatca tccgaatcgg caataggctg ctcaagaaca
     3601 tctggatttt gcaccaaatc atccgtagtt ggggcttgtt ctagattctc gacctctgcc
     3661 ggtttgtctt gcgcgacttc ttctgtaatg agattagagg tataaagaga acccagctca
     3721 acctctggaa gtttatttat tatatccctt tcttgtgcga tagaaacatt agcgctccca
     3781 caagcaatga aaataatggt aacgattagg atgactcgta tggaaagctt cttcatcagc
     3841 tcccctcctt cttccgtaat tagtttctag ttgctaaaca ttctagctgt tattttatta
     3901 tagaggagta agggggtacc tcgagccata aaattttaac ttcttaaaat tttatggctt
     3961 gcttagcaaa gttattcata attaatcgaa aatactagat ttcccgtata ttttccagcc
     4021 tggatatttt ctggggattc tatttccacg actgcatcgc cttctgttat ttccgaacct
     4081 ggggctaggg ttaaaatggc attttccgga ttattttcgg aaccatccca actcagcggt
     4141 gccaagcatt ggactgttgt gtctgccgta ttggccaagg ttagcttgtt gctctcagaa
     4201 atagatgttg ctaattggtt taatcccacg gacaaagttt tacttccacg attaatccct
     4261 tctactttca attcagaagt ttcatttaaa gaaatagaag ccggaatgac cactgtatag
     4321 ttttctaccc atttggcgta gatagttgta gatacagcag ctggcaatga aaagtcaaac
     4381 ttattagtga aattttgatc aagataccac ccgtcaaagt aatgtccttc ttttactgga
     4441 atcacttctt cccagtactc cccagaaatt ttattttgta ccttttgttc ctccgcgtct
     4501 tcaaattctc cacccatcgc atccattgtt agagaaagga aagcgccttt tctatagcca
     4561 gtaggttcac tttgatttcg atgataggtc tgtagttgcg agagattaga aaactgtacc
     4621 caattctttt cgtcatacca gtttgtattt gccaacccat aaaaagattg taaattgtga
     4681 ctgacaaaca agtaggttag ggaggtggtt ccagtaaaca tatctgtcat agtctttgcg
     4741 gtagtaaaat tatccagata taaagatttt aacgctgtac aattttgaaa catgccctgc
     4801 atattagtaa ccagactagt atcaaaatta cttacatcta atttctcaag tgattgacag
     4861 ttattaaaca tggtacgcat atcagtaaca gaactcgtat caaaatgact tacatctaat
     4921 ttctcaagta attcacaatc agcaaacatg ctatacatat tagtaacgga actcgtatca
     4981 aaattactta catctaactc ttcaaggcta ttacaagcag caaacatgcc cagcatagta
     5041 gtaacggaac tcgtatcaaa attacttaca tccaatttct caagtgctct acaggtacta
     5101 aacatgccct gcattgtagt tactgaacta gtattaaaat tacttacatc taattcttta
     5161 agactggtac tattaacaaa catgccatac atagtagtaa cggaactcgt atcaaaatca
     5221 cttacatcca atttttcaag tgctttacag tccctaaaca tataatgcat atcattcaca
     5281 gaactcgtat caaaattact tacattcaat ttctcaagtg attcacagta tccaaacatg
     5341 ctattcatat tattaacggc actcgtatcc cagttgctta aatccagttc cttaagtacg
     5401 ctacatttat aaaacatgtt cttcatatta gttactgcac tagtatcaag accactcaca
     5461 tcaagctccg taaggttgta actattttca aacatacttt ccatagtgag taaagatggt
     5521 actgtcggat aatcattatc tctgatgatc actttttgaa gtattggatt aaaaaacgct
     5581 tctctaaaag acgttactcc agacaaatta gaacgttcaa ttctcacgct ctcaagcgct
     5641 aagaaaccac caattttact tttaaaataa gtttcaaaac ttcctgtcaa agtagcttct
     5701 tcaatctcta tatgtttaat gttactcaaa taactcttcc aagcacttgg tatactgctt
     5761 ggcacgttgc caaacatatg caagctatat tcaccgttca cagtattgcg ataaatcgtc
     5821 cagtaagcac ctgagcttac cactgttaaa tccggattat ctgaatcagc aacaggctgc
     5881 tctcgaacat ctggattttg catcaactca tccgtagttg ggatttcttc tagattctcg
     5941 acctcggctg gcttctcttg cgcgacttct tctgcaatga tattagaggt atccagagaa
     6001 cttagctcct cttctggaag cttattcgtt gtgtcccttt cttgtgcgat agaaacatta
     6061 gcgttcccca gtgcaataaa aagcacagaa ataataagca ccactcgcat ggaaaacttc
     6121 ttcatcagct cccctccttc tttcgtagtt aatttctaga tgcaaacttt ctagctgcaa
     6181 cttaattata gaggagtcga gaagcatttc tggccataaa attttaactt cttaaaattt
     6241 tacggcttag ttggtgtgtt tgctttttcc attagtattg tacaaatgaa aaatagaaat
     6301 aaaaaaatcc gagtaacgat cattactcgg ataagacttt agttttccat ttaaacattt
     6361 tccatatcca ttccaacaag tgtttcccta atctttttta ttagcgataa atttttttct
     6421 cgctattttc gccagattat cattaatttt gacataatca gattctagcc atct
//
LOCUS       DASDYK010000126         6421 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.126, whole genome shotgun sequence.
ACCESSION   DASDYK010000126 DASDYK010000000
VERSION     DASDYK010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6421
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.126"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1195
                     /locus_tag="U0308_002529"
     CDS             <1..1195
                     /locus_tag="U0308_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycoside hydrolase family 125 protein"
                     /protein_id="HEM2317485.1"
                     /translation="TLDTTIKIRDSGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENE
                     EIESMLIGLSKEQVSLVEIDPYANAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCY
                     PIQLAYFIWKITGRTEQFDSAFFKMLQTIFALWEVEQHHETKSPYRFERMDCVPSDTL
                     KRNGLGTETAYTGMLWSGFRPSDDACEYGYLIPSNMFAVVVLGYAKEIIEAFYPREIE
                     TIKQAVTLQNDIQLGIEKFGTYNHPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPII
                     EYLEKESPIYQNTRKFILSKSNPYYFEGKLAKGIGSPHTPAGYIWPIGLAIQGLTASD
                     KSEKLEILQMLLRTDAGTGLMHESFHPDYPEDFTREWFSWANMMFCELVLDVAGFRMA
                     NVLKN"
     gene            1212..2102
                     /locus_tag="U0308_002530"
     CDS             1212..2102
                     /locus_tag="U0308_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2317486.1"
                     /translation="MATIRNKSAQIHQQRMAYLFIALPVLLLAIFMILPIGMALFVSF
                     TDYDIVNSPNWIGFDNYIKMFRDPYFLISLKNTIIYTALFVPLGLAASLGAAILINMN
                     KKGAGLFRTFFYVPVLCSTVATATIWYWLLNPQYGLINRVLGWFGINGPAWLYDSNWA
                     MFAIVMMSVWMTFGTNMMIFLAGLQGIPANLYEASKIEGASRWKTFRYVTWPSLSRTT
                     FLVTTMLIINAFQVFDQAYVLTKGGPGNSTITLVYYIYNEGFGGLKMGYASAISFVLF
                     LIILVFSIINMRVNKEDRTA"
     gene            2114..2989
                     /locus_tag="U0308_002531"
     CDS             2114..2989
                     /locus_tag="U0308_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM2317487.1"
                     /translation="MNTIKLKKGSKSFIWYIAVLLISLVTVFPLIWTVSTSFKPTSEI
                     LSNSMNLIPKMFTWDNYKDVFSTTPFARYLVNSLILAVGGVLTNLFFGSLAGYAFAKL
                     PFKGKKGLFMTFLGSMMIPAVVTMIPSFLVLKNFPLMGGNDITGHGGMGFINTYWAIL
                     IPGAAGAFSIFFMKQFFETLPDELSEAARIDGCSEFKIFWKIYMPLAKTALATLGIMT
                     FQAGWNQFMWPLIVLNSQKMMTVQVGLASFQYNESANYGALMAGTIVSTIPVLFVFIF
                     AQKYFVEGIAHNGGK"
     gene            3011..4264
                     /locus_tag="U0308_002532"
     CDS             3011..4264
                     /locus_tag="U0308_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM2317488.1"
                     /translation="MKKVLLAILSMVLLLSLAACGGSSDSSKDKDGKEEIVMWGSWSG
                     DQIKQLEKQIDSYNKSQDKYKVKYVMQENVEEKLLTGIAGGELPDIIMWDRYQTALYA
                     PKGVLEPLDKLVKEDNVKMDDFYEESVKEMTYSDKLYGLPLLNDNRILFYNKKLLQEA
                     GVKPPTTWDELATAAQKTTKWDGNKMTQAGMSLQDVGLFNLYLMQAGGELVTSDNKET
                     AFNSEQGLEVLNYWDKMQNDLKVYQRGFDDGSDAFAAGKEAMTYNGPWALADYNKVED
                     LDYGVVEPPKGPNGDKGAIMGGFGLVMPKQAEHKDGAWDFMKWWTTKPENGVEFAKIS
                     GWLPANKIAAEDEYFTKDPNYSVFVNTMKYAEIRPTVAGYADVEGLAMKPQFEKFMNG
                     NISAEKALSQAEKEGNQILKEERDK"
     gene            4268..5296
                     /locus_tag="U0308_002533"
     CDS             4268..5296
                     /locus_tag="U0308_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase"
                     /protein_id="HEM2317489.1"
                     /translation="MKWSEYANLAQLSLEKFYLADTKEQFLNNFYPTENPEEDNKVFN
                     YWWLAHLVEVRLDAYLRTKKQADLEIAENTYLHNKNRNGGTLIHDFYDDMLWNALAAY
                     RLYKETGKPIYLEDAQLVWQDLVDTGWNNIMGGGFAWRRPQMYYKNTPVNAPFIILSC
                     WLYNEFNETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGAIDYEWKFTYNQGVY
                     IGANLELYRITKDAKYLDTANKTADISLKELTEDGIFKDEGSGGDEGLFKGIFYRYFT
                     DLMEETANKTYRNFVFNSCQVLVDNAKLDGYLLMGMNWKENPSGKIPYSAELSGMIAL
                     EMAAKLER"
     gene            complement(5308..>6421)
                     /locus_tag="U0308_002534"
     CDS             complement(5308..>6421)
                     /locus_tag="U0308_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2317490.1"
                     /translation="KLLYQKVYDQLKLSIQEGKIPVGSKMPAENELMAQFDVSSITLK
                     KALELLKKDGYISRRPRVGTFVLNASPVSEQIETRMFDKPLFGCIMTNFDDTFGTTLL
                     SGMLEHSDSKAHIIVKKSLGDTEREEEILQEFIEMNVAGILILPASSKFVSPTLLELA
                     SQKFPLVVIDRTLEGLPISSISSDNTEAGRIITEKLFELGHKHIGMITSTSPVSTLDS
                     RVNGFIRGHASFHTAFHSDYVFREIESVMPNSTVSIQTDIDKIAHFLNTHSEITALVA
                     TEYNIALLIKQACNKLGKSIPGDLSVVSFDHPDNFFDNSAFQFTHIKQAQYEIGVKAV
                     DMLLNQVLKPDTINKETLPPMLIEGDSVKMLKSTSK"
BASE COUNT         2135 a          979 c         1297 g         2010 t
ORIGIN      
        1 cacattagac accaccataa aaattcgaga tagtggactc acatttattt taacaggtga
       61 tattccagca atgtggctac gtgattcagt atgccaagta cgaccttttc taatttttgc
      121 taaagaaaat gaagaaattg agtcgatgtt gattggcctt agcaaagaac aagtgagttt
      181 agttgaaatt gatccttatg ctaacgcttt taatgaaaca ccaaatggag ctggacatca
      241 agctgataaa acagaaatgc atccacaagt atgggaacga aaatatgaga ttgattcatt
      301 atgctatccg attcaattag cgtactttat ttggaaaatt actggaagaa cagaacaatt
      361 tgactcagca tttttcaaga tgttacaaac gatttttgct ttatgggaag tagaacaaca
      421 tcatgaaaca aaatcgccgt atcgttttga acggatggac tgtgttcctt ctgatactct
      481 aaaaagaaac ggactaggaa cagaaacagc atacacagga atgctttggt caggatttag
      541 accaagtgat gatgcttgtg aatatgggta ccttatccct tcaaatatgt ttgcagtagt
      601 agttttaggt tatgctaaag aaattataga agctttttat ccaagagaaa tagaaacgat
      661 aaaacaagca gttactttac aaaatgatat tcaattaggg attgaaaagt ttggtacata
      721 taatcatccg acttttggtg aaatatttgc ttttgaagta gatggtcttg gaaatcaatt
      781 attgatggat gatgcaaatg ttccaagttt actctctatg ccaatcatcg aatatcttga
      841 aaaggaatct cccatttatc agaatacgcg gaagtttatt ttaagtaagt caaatccgta
      901 ttattttgaa ggtaaactag caaaaggaat tggtagtccg catacaccag caggatatat
      961 ttggccaatt ggactggcaa ttcaaggatt gacagcaagt gataaatcag aaaaactgga
     1021 aattttgcaa atgttgttaa gaacggatgc cggaactgga ttaatgcatg aatcgtttca
     1081 tccagattac ccggaagact ttacgcgcga atggttttct tgggctaata tgatgttttg
     1141 tgaattagta cttgatgtag ctgggtttcg aatggcaaat gttttgaaga actaacgaag
     1201 gaggcttatt gatggcaaca attagaaata aatctgccca aatacaccaa caacgaatgg
     1261 cttacctttt tattgcactt ccagttttat tactagcgat ttttatgatt ttaccaattg
     1321 gaatggcgct atttgtcagt tttacagatt atgatattgt taattctccc aattggattg
     1381 gctttgacaa ttacataaaa atgtttagag atccttattt tctcatttca ttaaagaata
     1441 ctattatata caccgctttg tttgtaccac ttggtcttgc agcatcgctt ggggctgcta
     1501 tcttgattaa tatgaataaa aaaggggctg gcttgtttcg gacatttttt tatgtgccgg
     1561 tattatgctc tacggtagca actgcgacaa tatggtattg gttgcttaat cctcagtatg
     1621 gtttgattaa tcgtgtttta ggatggtttg gaattaatgg cccagcatgg ctctatgatt
     1681 cgaactgggc gatgtttgcg attgtgatga tgagtgtttg gatgacattt ggaacaaata
     1741 tgatgatttt tcttgccggt cttcagggta tcccggctaa cttatatgaa gcttctaaaa
     1801 tagaaggagc ttcaagatgg aagacatttc gttatgtcac ttggccatcc ctttcacgga
     1861 ccactttcct cgtaacaaca atgctaatta tcaacgcttt tcaggtgttc gatcaagcat
     1921 atgttttaac aaaaggcggt ccaggaaact caactattac gcttgtctac tacatttaca
     1981 atgaaggatt cggaggatta aaaatgggct atgcttccgc aatttctttt gtgttatttt
     2041 taatcatact agtattttcg attatcaata tgcgtgtaaa taaagaagat aggacagctt
     2101 aaggagggtt gatatgaata ccataaaatt aaaaaaaggg agcaagtcgt tcatttggta
     2161 tattgctgta cttctaatta gtttagtgac tgtttttcca cttatttgga cagtatctac
     2221 ttcctttaaa ccaacaagtg aaattttaag taatagtatg aatttaattc ctaaaatgtt
     2281 tacttgggat aattacaaag atgtttttag tacaacccca tttgcccgct acctagtcaa
     2341 ctctttaata cttgcagttg gtggtgtgct cactaattta ttcttcgggt cattagcagg
     2401 ttatgctttt gctaagctac cttttaaagg gaaaaaaggt ctttttatga catttttagg
     2461 aagcatgatg attccagcag tagtaacaat gattccatct ttcttagtat taaagaattt
     2521 cccgttgatg ggcggtaatg atattactgg tcatggtggt atgggtttta taaatactta
     2581 ctgggcaatt ttgattccag gagccgctgg ggcattttcg atctttttca tgaaacagtt
     2641 ttttgaaacg ttaccagatg aactttctga agctgcaaga atagacggtt gttcggagtt
     2701 taaaatcttt tggaaaatct atatgccgct tgctaaaact gcattagcta ctcttggaat
     2761 aatgacattc caggctggct ggaaccagtt catgtggcca ttaattgttc ttaattcaca
     2821 aaaaatgatg acagttcaag taggacttgc ttcttttcaa tataatgaga gcgccaatta
     2881 tggggcttta atggctggga caattgtttc taccattcca gtattatttg tatttatttt
     2941 tgcacaaaaa tattttgtag aaggtatcgc gcataatggc ggtaaataaa ccaaaaaagg
     3001 agtgtatagg atgaaaaaag tattgttagc aattcttagt atggtgttgt tgctcagttt
     3061 agcggcttgt ggtggaagtt cagacagtag taaggataag gacggaaaag aagaaattgt
     3121 tatgtggggc tcttggtcag gagatcaaat taaacagtta gaaaaacaaa tcgatagcta
     3181 taataagtca caagataaat ataaagtaaa atatgtaatg caagaaaatg tagaagaaaa
     3241 attattaaca ggaattgcag gtggcgaact ccctgatatt attatgtggg atcgctatca
     3301 aacagctctt tatgcaccaa aaggagtgct tgaaccgcta gataaacttg tcaaagaaga
     3361 caacgtgaag atggatgatt tttatgaaga atcagtgaaa gaaatgacct atagtgataa
     3421 attatatggt ttaccgttat tgaatgataa tcgaattctg ttttacaata aaaaattatt
     3481 acaagaagct ggcgtaaaac caccaactac gtgggatgaa ttagcaactg ctgcgcaaaa
     3541 aacaacgaaa tgggatggaa ataaaatgac gcaggcagga atgtcacttc aagatgttgg
     3601 cttgtttaac ttgtatttaa tgcaagcagg tggcgaacta gtaacttctg acaataaaga
     3661 aacggcattc aattcagaac aaggcttaga agtactaaat tattgggata aaatgcaaaa
     3721 tgatttaaaa gtgtaccaac gcggttttga tgatggctcc gatgcttttg cagccggaaa
     3781 agaagcaatg acatacaacg gtccgtgggc tttagcagat tataataaag tagaagacct
     3841 tgattatggt gtagtagaac cacctaaagg accaaatggc gataaaggcg ctattatggg
     3901 cggatttgga ttagtaatgc ctaaacaagc cgaacataaa gacggcgcat gggactttat
     3961 gaagtggtgg acaacgaaac cagaaaatgg cgtagaattt gccaaaatta gtggttggtt
     4021 accagcaaac aaaattgctg ctgaagatga atattttacg aaagacccaa attattctgt
     4081 ttttgtaaat acaatgaaat atgctgaaat tcgtccaact gtggcaggct atgcagacgt
     4141 agaaggttta gcaatgaaac ctcaatttga gaaattcatg aatggtaata tttcagctga
     4201 aaaagcttta tcacaagctg aaaaagaagg aaaccaaatt ttaaaagaag agagagataa
     4261 ataaacgatg aaatggtccg aatatgcaaa tttagctcaa ctaagtttag aaaagtttta
     4321 tcttgccgat acaaaagaac aatttttaaa taacttttat ccgacagaaa atcctgagga
     4381 agataataaa gtttttaatt attggtggct agctcacttg gtggaagtac gattagatgc
     4441 atacttacgt acaaaaaaac aagcagattt ggagatagcg gaaaacacat atttgcataa
     4501 taaaaataga aatggtggaa cgcttattca tgatttttat gatgatatgc tttggaatgc
     4561 acttgcggct tatcgtctat ataaagagac tggaaaacca atttatctag aagatgcaca
     4621 gttggtttgg caggatttag tggatactgg ttggaataac ataatgggag gtggctttgc
     4681 ttggcgtcga ccacaaatgt attataaaaa cacgcctgta aatgcaccgt tcattattct
     4741 ttcttgttgg ctatataatg aatttaatga aacgaaatat ttagagtggg caatgaagac
     4801 ctatgaatgg caaactaaag tccttgtacg tgaagatggt tttgtagaag atggcattaa
     4861 tcgtttagaa gacggagcca ttgattatga atggaaattc acttataacc aaggtgtata
     4921 tattggagct aatttagaat tatatcgtat tactaaagac gcaaaatatt tagatactgc
     4981 gaataaaact gcagatatat cattaaaaga attaacggaa gatggtatat ttaaggatga
     5041 aggcagcggc ggagatgaag gactattcaa agggattttt tacagatatt ttactgattt
     5101 aatggaagaa accgcaaata aaacttatcg gaattttgta tttaatagct gccaagtgct
     5161 agttgataat gcaaaattag atggatattt gttaatggga atgaattgga aagaaaatcc
     5221 ctctgggaaa attccttatt cagcagaatt aagtggaatg atcgcacttg aaatggcggc
     5281 aaaactagaa cgataaaaaa gcacctccta cttggaggtg ctttttagca ttttgaccga
     5341 atctccttct ataagcattg gaggtagagt ttctttgttt atagtatctg gttttagcac
     5401 ttgatttaaa agcatgtcaa ctgctttcac gcctatttcg tattgggctt gtttaatatg
     5461 tgtaaactgg aaggcagagt tatcaaaaaa attatctgga tgatcaaaac taacaacgga
     5521 taaatcacca ggaatggatt tccctaactt gttgcatgct tgttttatca aaagagcaat
     5581 attgtattca gttgctacaa gtgccgtgat ttcagaatgt gtattcaaaa aatgtgcaat
     5641 tttatcaata tctgtttgga tggaaacggt tgaatttggc attactgatt ctatttcgcg
     5701 aaaaacataa tcagagtgaa aagctgtgtg aaaagatgca tgccctcgaa taaatccgtt
     5761 tactcgacta tcaagcgtag agactggact agtagatgtt atcattccaa tatgcttatg
     5821 cccaagttca aataattttt ctgtaataat tcgaccagct tctgtattat ctgaactaat
     5881 agaagatatt ggtaagcctt ctaatgtacg atctatgaca actaaaggaa atttttgaga
     5941 agcaagttct agtaaggtcg gtgaaacaaa cttcgaacta gcaggtaaaa tcagtatccc
     6001 tgcaacattc atttcaataa actcttgcaa aatttcttct tctcgctctg tatcgccaag
     6061 tgattttttt acaataatat gagctttaga gtcactgtgc tctaacatcc cagataataa
     6121 agtagtacca aaagtatcgt caaaatttgt cataatacaa ccaaaaaggg gtttatcaaa
     6181 cattctagtt tctatttgtt cgctaactgg cgaagcatta agtacaaaag taccaacccg
     6241 agggcgtctt gaaatataac catctttctt taataattct agcgcctttt ttaacgtaat
     6301 actgctcaca tcaaattgag ccatcaattc attttctgca ggcattttgc tgccaacagg
     6361 aatcttacct tcttgaatcg acagtttaag ctgatcatag actttttgat atagtagttt
     6421 t
//
LOCUS       DASDYK010000127         6392 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.127, whole genome shotgun sequence.
ACCESSION   DASDYK010000127 DASDYK010000000
VERSION     DASDYK010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6392
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.127"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..815)
                     /locus_tag="U0308_002535"
     CDS             complement(<1..815)
                     /locus_tag="U0308_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1963 domain-containing protein"
                     /protein_id="HEM2317491.1"
                     /translation="MEQLFDILPSEWAERFLETEKERIELHFKDVGKLSLLQSKAGGR
                     GYLPREQGYPVTEEGKPLSLLTQINFSEMPQMENYPEFGLLAFYVDYQDDLYGLNFEN
                     PTSQEGFRVFFFDDLGSESLTAEEQDAFFEDVAKSDFYPVVNGEFKIAGQVSDQILLQ
                     DSFDFENEFGSNFYELADQIFAEDEDKSEALYQLGKECSQIGGYPFFTQEDPRMYTEN
                     PHHDTLLFQLASEDFDESRMAIMWGDCGVGNFFINKQDLINRDFSNIMYNWDCS"
     gene            complement(900..2111)
                     /locus_tag="U0308_002536"
     CDS             complement(900..2111)
                     /locus_tag="U0308_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM2317492.1"
                     /translation="MSKPKIVILGAGYGGLKTLRKLQQRNLEAEIVLVNKNDYHHETT
                     WLHEAAAGTIEPEKLMYPLDKVVNNTKTTFIQDTVVKINKDEKTVTLDANGDISYDYL
                     LIALGSEAETFGISGLKEYAFTITSVESVKKIRAHIEAQFAKWKTDPRDELLTIIVGG
                     AGFTGIEFLGELTNRIPELVKEYDVPREKVRIYCMEAAPKVLPQFDAKLVDYGVGVLE
                     DRGVEFHVGKPVKEATADGVKYAESENEVREIKAATIIWAAGVRGNSVIEASGFEAGR
                     GRVKVNNNLTVPGNEEILIVGDCSLIINPANDRPFPPTAQIAMQQADVAAVNLAKLVK
                     GETDLQDFVYHEKGTVCSLGDNDAIGVVFGKNLKGYPASVMKKVIDDRALLLIGGSGV
                     LASKGKFKFYK"
     gene            2561..3556
                     /locus_tag="U0308_002537"
     CDS             2561..3556
                     /locus_tag="U0308_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM2317493.1"
                     /translation="MDEKTKIYDITIIGGGPVGLFAAFYAGMRNASVKIIESLPQLGG
                     QLSTLYPEKYIYDIPGYPAVRAQELVNNLIQQMKPFDPTIALEEAVQSVEKQVDGTFE
                     IITKKDTHYSKAVIITAGNGAFEPRRLDLPEAEQYEGKNIHYFINDLSRFSGRRVAVC
                     GGGDSAVDWALMLEKVASSVAIVHRRNAFRAHEHSVNNLEKSSIAIKTPFIPTEVLGN
                     GDKLTHITLQEVKGDTRETLEIDDFIINYGFVSSLGPIKNWGLELERNSIVVNSKMET
                     SIPGIYCAGDICTYDGKVKLIATGFGEAPTAVNNAMNFIDPKTRVQPMHSTSLFE"
     gene            3644..4273
                     /locus_tag="U0308_002538"
     CDS             3644..4273
                     /locus_tag="U0308_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2317494.1"
                     /translation="MNVLVIGANGKIGRLLVEKLAMEKGFFVRAMVRKAEQVSELEKL
                     GAKPIIADLKKDFHYAYDEIEAVIFTAGSGGHTPASETINIDQNGAIKAIETAKEKGV
                     RRFIIVSSYGADNPENGPESLIHYLKAKQAADEELKRSGLDYTIVRPVGLSDDPATGK
                     IAEVSEKPTTTIPRADVADFISEALSEKSSFYKTYTIESGDTPIKHFFD"
     gene            complement(4319..4552)
                     /locus_tag="U0308_002539"
     CDS             complement(4319..4552)
                     /locus_tag="U0308_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YuzB family protein"
                     /protein_id="HEM2317495.1"
                     /translation="MNPIVEFCVNNLASGADAAFAKLDADDSLDVIEYDCLTYCDLCA
                     TSLFALVDGEVVRGETAEELVANIYTFLEENPF"
     gene            complement(4574..4900)
                     /locus_tag="U0308_002540"
     CDS             complement(4574..4900)
                     /locus_tag="U0308_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YuzD family protein"
                     /protein_id="HEM2317496.1"
                     /translation="MVNEAKLYVYGSTTICASCVGAPSSKETEEWLRAAIGRKFSGQP
                     FVVEYVDIFNPPNEKALADMANKIVEEDYMYPVIVVDGEIIAEGNPRLKDIYQVMTDR
                     GYLATM"
     gene            complement(5141..5323)
                     /locus_tag="U0308_002541"
     CDS             complement(5141..5323)
                     /locus_tag="U0308_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317497.1"
                     /translation="MCGGRILREGLHARFTRMHIWPVTRFASNGPNKNTFLRLRKERA
                     LSTGKVERQLGCAPNC"
     gene            5972..>6392
                     /locus_tag="U0308_002542"
     CDS             5972..>6392
                     /locus_tag="U0308_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317498.1"
                     /translation="MQKAIKIMLVLFLMTTVFLPFSNVRAASTDVVNIPDPYLNEGLK
                     SIVGNPFLTELTEANLETISVADISYMNGVPGYAVTGLISDLTGLEKAVNMTKLYFSN
                     QTEIKNLNQIKDLPNLKKIVGVTTGLNDIKALGEMPAL"
BASE COUNT         1990 a         1395 c         1067 g         1940 t
ORIGIN      
        1 gagcaatccc agttatacat aatgttagaa aaatcacgat tgattaaatc ttgcttgttg
       61 atgaaaaagt taccgacacc gcagtccccc cacataattg ccattctact ctcatcaaaa
      121 tcctcagatg ctaattgaaa caaaagcgtg tcatgatgcg ggttttctgt atacatacgc
      181 ggatcttctt gtgtaaaaaa aggatatccg ccaatttgac tacattcttt acccagttga
      241 tataatgctt cagatttatc ttcatcctcc gcgaaaattt ggtcagccag ctcataaaaa
      301 ttacttccaa attcattttc aaaatcaaag ctatcttgta atagaatctg atctgaaact
      361 tgcccagcta ttttaaactc accattaaca acggggtaaa agtccgactt tgctacatct
      421 tcaaaaaatg catcttgttc ttcagcagtt aagctctcac ttcccaagtc atcaaagaaa
      481 aacactcgaa aaccttcttg gctcgttgga ttttcaaaat taagtccgta caaatcatct
      541 tgataatcca cataaaaagc gagtaagcca aattccggat aattttccat ttgtggcatt
      601 tctgaaaaat taatttgtgt taataaagac agcggtttac cttcttcggt cactggatag
      661 ccttgctctc tcggcaagta accacgccca ccagctttac tttgcaacaa tgaaagctta
      721 ccaacatcct taaaatgcag ttctatacgc tctttctctg tttctaaaaa tcgttcggcc
      781 cattcactag gaagtatatc aaaaagttgt tccatgactt accttctttc tttttttcta
      841 attataacat gaaaaaagcg ccatatctga caaaagcaga tacagcgctt cttgaatttt
      901 tatttataga atttgaattt ccctttactt gccaagacgc ctgaaccacc aattagtaat
      961 agcgcgcggt catcaatgac ttttttcata acggaagctg gatagccttt caagttttta
     1021 ccgaaaacga caccaattgc atcgttatcg cctagagagc aaactgttcc tttttcatga
     1081 taaacaaagt cttgtagatc tgtttcgcct ttaactaatt tagctaagtt cactgcagcc
     1141 acatcggctt gttgcattgc gatttgggca gttggtggga atggacggtc gtttgctggg
     1201 ttgatgatta gtgagcagtc accaacaatt aaaatttcct cgttaccagg aacagttaaa
     1261 ttgttgttta ctttcacacg accacgacca gcttcaaagc cagatgcttc aattacgcta
     1321 ttgccacgaa cacctgcagc ccaaataatg gttgctgctt tgatttcacg aacttcattt
     1381 tcactttccg catattttac gccatcagcg gtagcttctt tgactggttt accgacatgg
     1441 aattctacgc cgcgatcttc cagtacacca acaccataat caaccagttt cgcatcaaat
     1501 tgtggtaata cttttggagc tgcttccata caataaatgc gcactttttc gcgaggcaca
     1561 tcgtactctt tcactagttc tggaatgcga ttagttaatt ccccaagaaa ctcaattcca
     1621 gtaaagccag cgccaccaac gataattgtt aataattcat cgcgtggatc tgttttccat
     1681 ttagcaaatt gcgcttcaat gtgcgcacgg atttttttga cggattctac acttgtaata
     1741 gtgaaggcat attctttcaa accactgatt ccaaatgttt ctgcttctga cccaagagca
     1801 attaataaat agtcatagct gatatcgcca tttgcatcta gtgtgactgt cttttcgtct
     1861 ttattaattt ttactacagt atcttggata aatgtagttt tcgtattgtt tacgacttta
     1921 tcaagtggat acattagttt ttctggctca attgttccag ctgctgcctc gtgtaaccaa
     1981 gtcgtttcgt ggtgatagtc attcttattc actagaacga tttcggcttc caagtttctt
     2041 tgttgtaact tgcgtaaagt ttttagtccc ccgtatcctg ctccgagaat gacaattttt
     2101 ggtttactca tctgttatca catctacttt cccttatatt tttcttcaca aaaaaaattg
     2161 cattaagaat ttcttactgc acctatgtag attgcgctaa aaatctactg caaacaatga
     2221 ataaagtgaa aatggtaagt accaatatat tccctatttc acagcttaca aactatatca
     2281 tagacttttt cacattcatt ttcaagaaag cgaactcaag ggtttaagct tctttgtagc
     2341 atggttcgag tggtatacga tttttttcac aataaagctt tgagatggct tgattttcgt
     2401 aaatatcttt tatttgatgg ataattggtc tagttcatta ttatactatt tttattgcag
     2461 caatcccgta aacattcttt tttcataatc tatgctaaaa tatgcttatt gcaactttag
     2521 cgatttcata gggaaattac gaactagggg gtgatgtatt ttggatgaaa aaacaaaaat
     2581 ttatgatatc acgatcattg gtggtggacc ggttgggcta tttgctgcgt tttatgccgg
     2641 aatgcgcaat gcgagtgtga aaataataga aagtttaccg caattaggtg gacaactttc
     2701 cacgctttat cccgagaaat atatttatga tattccgggc tatcctgctg tacgcgcaca
     2761 ggaacttgtt aataacttga ttcaacaaat gaaaccattt gatccaacca ttgcgctaga
     2821 ggaagcggtt caaagcgtag aaaaacaagt tgatggcaca tttgaaatca tcacgaagaa
     2881 agatacacat tacagtaaag ctgttattat taccgctgga aatggcgcat ttgaaccaag
     2941 acgtttggat cttccagaag cagagcaata cgaagggaaa aacattcatt atttcatcaa
     3001 tgatttaagt cgcttttcgg ggcgtcgcgt tgccgtttgt ggtggtgggg attccgcagt
     3061 ggactgggca ctcatgcttg aaaaagttgc cagttctgtc gcgatcgttc atcgtcgtaa
     3121 tgcttttcgt gcgcacgaac atagcgtgaa caatttagaa aaatcttcca ttgccatcaa
     3181 aacaccattt atcccaactg aagtactcgg taacggcgat aaattaacgc atattacttt
     3241 gcaagaagtc aaaggtgata caagggaaac actggagatt gacgatttca tcattaacta
     3301 tggtttcgtt tcttcgcttg gtccaattaa aaattggggc ctagagctag aacgcaattc
     3361 gattgtcgtt aattcaaaaa tggaaacgag tatcccagga atttattgtg caggtgatat
     3421 ttgcacgtat gacggtaaag taaaactaat cgcgaccgga ttcggtgaag ctccaacagc
     3481 tgttaataac gcgatgaatt tcattgatcc aaaaacacgc gtgcaaccaa tgcactccac
     3541 atctttattc gaataacaac cgaaaccacg aggcgacttg tggttttatt ttttactcac
     3601 cgggaaaagt tctttgtaga tattttttag gaggagatta gcaatgaatg tactcgtaat
     3661 tggcgcaaat ggcaaaatcg gccgtctttt agtagaaaaa cttgccatgg aaaaaggctt
     3721 tttcgtccga gcaatggttc gaaaagccga acaagtaagc gaacttgaaa aacttggcgc
     3781 taagccgatt atcgccgatt taaaaaaaga tttccactat gcctatgatg aaattgaagc
     3841 tgttattttc acagcaggat ccggtggtca tacgcccgct tccgaaacta tcaacattga
     3901 ccaaaacggc gccatcaaag ccatcgaaac tgctaaagaa aaaggtgtac gtcggttcat
     3961 cattgttagc tcttatggcg ccgacaatcc agaaaacggt cccgaatccc tcatccatta
     4021 tttaaaagcc aaacaagcag ccgatgaaga actaaaaaga agcggtctcg actacaccat
     4081 cgtccgccca gttggccttt cagatgatcc agctactggc aaaatcgctg aagtttccga
     4141 aaaacctaca acgactatcc cgcgcgctga tgttgcagat tttattagtg aagctttatc
     4201 cgaaaaatct agtttctata aaacctatac catcgaaagt ggcgacacac ccattaaaca
     4261 tttttttgat taataaaaag cgatgagcca aattacgcgc tcatcgcttt tttctatatt
     4321 aaaacggatt ctcttccaaa aatgtatata tattcgcaac caattcttct gctgtttctc
     4381 cgcggaccac ttccccgtcc actaaagcaa acaaactcgt cgcgcataaa tcacaatatg
     4441 tcagacaatc atattcaatc acgtctaaac tatcatccgc atctaatttc gcaaaagctg
     4501 catctgcccc gctcgccaaa ttattcacgc aaaattccac aatcggattc atttccactt
     4561 gcctcctaga ctgttacatc gttgccaagt aaccacggtc ggtcattact tgataaatat
     4621 ctttcaaccg aggattgcct tccgcgataa tttcaccatc aaccacaatg actgggtaca
     4681 tataatcttc ctcgacaatt ttattcgcca tatccgctaa agccttctca ttcggcggat
     4741 taaaaatatc cacatactcc accacaaacg gctgccctga aaacttccga ccaattgcag
     4801 ctcgaagcca ttcctctgtt tccttcgagg atggcgctcc gacacaactc gcacaaatag
     4861 tcgttgaacc ataaacatat aatttcgctt catttaccat cacgcttcac ctcactatta
     4921 ttgtacaaaa acccaccaaa aaaagcgact aagctgtttc acgaagcata actattaaat
     4981 tttatgaatt tttataaaga tatgaattga cacgaattta cagatatatt ataatatttc
     5041 caatacattg ctaatcttta aagcagtagt gtattaatat gataaattat ctctaggttg
     5101 tacccgtgat ttcacggtca acatataagt aacactccct ttaacaattg ggcgcgcaac
     5161 ccaattgtct ttcaacctta ccagttgaaa gagcacgttc ctttctgagc cttaggaacg
     5221 tgtttttgtt tggcccgttc gaagcaaagc gagttacggg ccaaatatgc atgcgagtga
     5281 aacgagcatg taatccttcc cgtaaaatgc gccctccaca caacctttca cccagcatca
     5341 aaatccttcc accatctatc gaaaacccac actcccattc acccgttcga agcaaagcga
     5401 gttacgggcc aaatatgcat gcgagtgaaa tgagcatgta atccttcccg taaaatgcgc
     5461 cctccacaca acctttcacc cagcatcaaa atccttccac catctatcga aaacccacac
     5521 tcccattcac ccgttcgaag caaaacgaat tacggcccaa atatgcatgc gagcatgtaa
     5581 ttcttcccga aaaatatatc ctccaaacaa atacttttca atactttcag aataatataa
     5641 aatcattgcc caatttatat gttatatata tccatctaca tccttttaac gtctgtctat
     5701 tgaagaaaaa cctagctcta tcaacacatt cccatcgtaa aacagtacta aaaacaatta
     5761 tgtcgaaacc ttgaacctca ctctatttta agtaaatccc atcaaaaaaa ccatgcttaa
     5821 taaagattcc tcatgatatt ataactttgc ttagaaatgt attcggttgg aaatactact
     5881 ttaatcaatt aattttgttg ttgaaatagt taattttaac gaataaataa ttacgaatac
     5941 atttcaaaaa aacaaggagg aaattaaaca tatgcaaaaa gcaatcaaaa taatgttagt
     6001 tttattttta atgacaaccg tatttttacc ttttagtaat gttcgggcag catcaactga
     6061 tgtagtaaat ataccagatc cgtatttaaa cgaaggtctt aagagcatcg taggaaatcc
     6121 attcttaacc gaattgactg aagcgaatct tgaaaccatt agtgtcgctg atatctctta
     6181 tatgaatgga gtacctggtt atgctgtcac tggtttaatt agtgatttaa ccggactcga
     6241 aaaagcagtt aatatgacca aattatattt ttcaaaccaa acagaaatta aaaatttaaa
     6301 tcaaataaaa gatttaccta atctgaagaa aattgttggt gttactacag gtttaaatga
     6361 tattaaagcc cttggtgaaa tgcccgcact cg
//
LOCUS       DASDYK010000128         6320 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.128, whole genome shotgun sequence.
ACCESSION   DASDYK010000128 DASDYK010000000
VERSION     DASDYK010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6320
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.128"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            139..597
                     /locus_tag="U0308_002543"
     CDS             139..597
                     /locus_tag="U0308_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CtsR family transcriptional regulator"
                     /protein_id="HEM2317499.1"
                     /translation="MKNISDVIEAYLKQVLESSEAVEIKRSEIADKFECVPSQINYVI
                     NTRFTMERGYIVESKRGGGGYIRIIKVKMNDKLQLLEAIISMVHDKKVSQSFSEDVIL
                     RLLEEEVITKKEARLMVAALDREVLILPLPDRDILRSRILEAMLVALKYD"
     gene            610..1128
                     /locus_tag="U0308_002544"
     CDS             610..1128
                     /locus_tag="U0308_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HEM2317500.1"
                     /translation="MICQRCGENKAVIALQQLNELGKVESLYLCENCATDEALSSEKD
                     LVKAMDTFSEVALDFLTLLQKEENAQKEIVCENCQLSFEEFLKTNRVGCPECYSAFEA
                     QLVPIIGRVQNGYKKHVGKVPAEVERAEGVQNEISRLQEKLAQLVENEEFEEAAVVRD
                     EIKALKAGGEDK"
     gene            1125..2147
                     /locus_tag="U0308_002545"
     CDS             1125..2147
                     /locus_tag="U0308_002545"
                     /EC_number="2.7.14.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein arginine kinase"
                     /protein_id="HEM2317501.1"
                     /translation="MNVFEPRLSSWLENAGDDDDVVLSSRIRLARNLKDEQFPVYEQK
                     EEIVDNIAEVFDDNFTLIKMNQISLLQKALLVEKHLISPYMMNKSEYGAVLLNEEENV
                     SIMLNEEDHLRIQCMTPGLRLFDALEAALQIDGYVEEKLSYAFDKEFGYLTSCVTNIG
                     TGMRASVMVHLPGLVTTKRIKSVIEAIRSLGFVVRGIYGEGSMPASNIFQVSNQVTLG
                     KTETEIVEDLTQVMEQIIMQERVARTTLKQKFHIALEDRVFRSYGLLMNCRIISMKEA
                     SDAISDIRLGVELGFFEHISRQKMNELVLFSQPAFLRREAGRDMDELEEKVIRAKVIR
                     EILGDK"
     gene            2176..4638
                     /locus_tag="U0308_002546"
     CDS             2176..4638
                     /locus_tag="U0308_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEM2317502.1"
                     /translation="MMFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEG
                     IAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQYTPRAKKVIELSMDEARKLGHTY
                     VGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGDATGAGRQTNTQATP
                     TLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAE
                     GLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILF
                     IDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKDAALERRFQ
                     PIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFLPDKAID
                     VIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEFEKAASLRDKEQKLKK
                     SLEETKANWQEKQGLDHSEVTEEIVAEVVASWTGIPVAKLAETETNKLLNMEKLLHER
                     VIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDED
                     SMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPD
                     VFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHK
                     AMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHV
                     KLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGVKDG
                     KLEVRKKDAPKKKTTAKKVKTK"
     gene            4785..6158
                     /gene="radA"
                     /locus_tag="U0308_002547"
     CDS             4785..6158
                     /gene="radA"
                     /locus_tag="U0308_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEM2317503.1"
                     /translation="MAKAKRTTKFVCQACGYESAKWMGKCPNCNEWNQMVEALEPSKK
                     SRSAFNHTGEPSKATPITQIASETEKRVETNMPELNRVLGGGVVPGSMVLVGGDPGIG
                     KSTLLLQVSAQLTLTNKKVLYISGEESIKQTKLRAERLQVSGDNLYVYAETNLEAVQE
                     TIDFVKPDFVVIDSIQTVYHPDVTSAAGSVSQVRECTATLMRIAKMQNIAIFIVGHVT
                     KEGAIAGPRLLEHMVDTVLYFEGERHHAYRILRAVKNRFGSTNEMGIFEMRDVGLVEV
                     ANPSEVFLEERLEGASGSTVVASMEGTRPVLVEIQALVSPTMFGNAKRMATGIDYNKV
                     SLIMAVLEKRVGLMLQNQDAYLKAAGGVKLDEPAVDLAVAVSVASSYRDKPTRSTDCF
                     IGELGLTGEIRRVARIEQRVQEAAKLGFKRIFIPKNNEGNWKIPKDVQVVGVETIGEA
                     LKKALPD"
BASE COUNT         2060 a          892 c         1566 g         1802 t
ORIGIN      
        1 aaaagtccta attatttagg gctttttttg tttgtaaaag ataaataaat tgctaatagg
       61 tagggatatc tagtataatt aaagtcaaaa atagtcaaag tcaatgattt gcaaaaaaca
      121 gaaaggagat tccttataat gaaaaacatt tctgatgtta tagaagctta tttgaaacaa
      181 gtattggaat caagtgaagc agtcgaaatt aaaagaagtg aaattgcaga taagtttgaa
      241 tgtgtacctt cacaaattaa ttatgtaata aacactagat ttacaatgga acgagggtat
      301 atcgttgaaa gtaaacgtgg tggtggtggc tatattagga ttattaaagt gaaaatgaat
      361 gataaacttc aattgttaga agcaatcatt tcaatggttc atgataaaaa ggtctctcaa
      421 tcattttctg aagatgttat tttgagattg cttgaagaag aagtaataac gaagaaagaa
      481 gcaagattaa tggtggcggc attggacagg gaagttttaa ttttaccttt acccgataga
      541 gatattttga gaagtaggat tttagaggcg atgttagttg ctttgaaata tgattaaggt
      601 gtgatgacga tgatttgtca aagatgtgga gaaaataaag cagttattgc cttgcaacaa
      661 ttaaatgagc ttgggaaagt ggagtcattg tacctatgtg agaattgtgc tacggacgaa
      721 gctctctctt cggaaaaaga tttggttaaa gcgatggata cttttagtga ggttgctctt
      781 gacttcttaa cgcttttgca aaaagaagaa aatgcgcaga aagagattgt ttgtgagaat
      841 tgccagctta gttttgaaga gtttttaaag actaatcgag ttgggtgccc ggagtgttat
      901 tcggcttttg aggcacagtt agtaccgatt attggtcgag tgcaaaatgg atataaaaaa
      961 catgttggta aggttcctgc agaagttgaa cgtgcggaag gtgttcaaaa tgaaattagt
     1021 cgcttacaag aaaagctagc acagctagtt gaaaatgagg agtttgagga agctgctgtt
     1081 gtccgtgatg aaatcaaggc tttgaaagct ggaggtgagg ataaatgaat gtatttgaac
     1141 cgcggctgag ttcttggtta gaaaatgctg gtgatgacga tgatgttgtt ttaagctcac
     1201 gtattaggct tgctaggaat ttgaaggatg aacagtttcc agtttatgag cagaaggaag
     1261 agattgttga taatattgcc gaagtttttg atgataattt tactttgatt aaaatgaatc
     1321 aaatttcttt gttacaaaag gcgcttttgg tggaaaaaca tttaattagt ccttatatga
     1381 tgaataaaag tgaatatggt gcggttcttt taaatgagga agaaaatgtg agtattatgt
     1441 tgaatgagga agatcatttg cggatacagt gcatgacgcc gggtttgaga ttatttgatg
     1501 cgttagaggc agcgttgcaa attgatggtt atgtggaaga gaagcttagt tatgcttttg
     1561 ataaagagtt tggatatttg acgagttgtg tgactaatat cgggactggt atgcgcgctt
     1621 ctgtaatggt gcatttaccg ggactcgtga caacaaaaag gattaaaagt gtgattgaag
     1681 cgattaggag cctaggtttt gtggtaagag gtatatacgg agaaggtagc atgcctgcaa
     1741 gtaatatttt ccaggtctca aatcaagtaa ctctcggtaa aacggaaaca gaaattgtgg
     1801 aagatttaac gcaagtcatg gaacaaatta tcatgcaaga gcgtgttgct agaactacat
     1861 taaagcaaaa atttcatatt gcacttgagg atagagtttt tagatcatat ggtttattga
     1921 tgaattgtcg aattatttct atgaaagaag cttcagatgc tatatcggat atacggcttg
     1981 gtgtagaatt aggatttttc gagcatattt ctcgccaaaa aatgaatgaa ttggtactat
     2041 tctcgcaacc agcttttttg agaagagaag caggacgaga tatggatgaa ttagaagaga
     2101 aagtaatacg ggccaaagtg attcgcgaga ttttgggcga taaatgatga ggcttacgat
     2161 aaggaggaaa caacaatgat gtttggacga tttacgcaaa gagctcagaa agtactcgcg
     2221 ttgtcacaag aagaggcgat gcgtttgaat catagtaatt taggaacaga acatatttta
     2281 ttagggcttg taagagaagg cgaaggaatt gcggcgaaag ctctctatga actgggaatt
     2341 agttctgaaa aagtgcagca agaggtggaa ggattaattg gtcatgggga aaaagctgtg
     2401 acgacgatcc aatatacacc tcgtgcgaaa aaagtaattg aactgtccat ggatgaggct
     2461 cgtaaattag ggcatactta tgttggaaca gaacatatct tactggggct tattcgtgaa
     2521 ggcgaaggag ttgcggctcg cgttttaagt aatcttggta ttagtttgaa taaagctcgt
     2581 cagcaagttt tacagctctt aggcggcggg gatgctactg gggcaggaag acaaacaaat
     2641 acacaggcta caccgacttt agatagtttg gcacgtgatt taacagttat tgctcgggaa
     2701 gataatttgg atccggttat tggccgttct aaagaaatcc aacgtgtgat tgaagtgctt
     2761 agtcgtcgta cgaagaataa cccagtactt attggagaac ctggtgttgg taaaacagcg
     2821 attgcagaag gactagcgca acaaattgtt cgtaatgaag tgcctgagac tttacgtgga
     2881 aaacgtgtaa tgacactgga tatggggact gttgtggcag ggacaaaata tcgtggtgaa
     2941 tttgaagacc gtttgaaaaa agtaatggat gagattcgtc aagccggcaa tgttattcta
     3001 tttattgatg aattgcatac cttaattggt gctggtggag cggaaggtgc gattgatgcc
     3061 tcgaatatct tgaagccgcc tctagctcgt ggtgagttgc aatgtattgg tgcaacaaca
     3121 ctggatgagt accgtaaata tattgaaaaa gatgctgcac ttgagagacg tttccaaccg
     3181 attaaagtag atgagccaac tgtagaagaa tccattcaaa ttttacatgg gttgcgtgat
     3241 cgttatgagg cgcatcaccg tgttgcgatt actgatgaag cgcttgaggc tgctgttcgt
     3301 ctatctgatc ggtacatttc agaccgtttc ttaccggata aagcgattga tgttattgat
     3361 gaatctggtt ctaaagtacg tttgaaatct tttacaacgc caaaaaatgt aaaagaaatg
     3421 gaaaacaatt tatccgattt gaaaaaagaa aaagatgcgg ctgttcaagg gcaagaattt
     3481 gaaaaagcag cgtcattacg cgataaagaa caaaaactta aaaaatcatt agaagaaaca
     3541 aaagcgaatt ggcaagaaaa gcaagggctt gaccatagtg aagtaacaga agagattgtt
     3601 gctgaagttg ttgcaagttg gactgggatt ccagttgcaa aacttgcgga aacagagaca
     3661 aataaacttt taaatatgga gaaactttta catgagcgtg tgattgggca agatgctgcg
     3721 gtgaaagctg tttcgctagc tgtacgtcga gctcgtgcgg gacttaaaga tccgaaacgt
     3781 ccgattggtt cctttatttt ccttggacct actggtgttg ggaaaacaga acttgctcgc
     3841 gcgcttgctg agtctatgtt tggtgatgag gattcgatga ttcgaattga catgtctgag
     3901 tacatggaga aattttccac tgctcgttta gttggggctc ctccaggtta tgtaggctat
     3961 gaagaaggtg ggcaactgac agaaaaagtt cgtcaaaaac cttattcagt agttctttta
     4021 gatgaaattg aaaaagcgca tccggatgta tttaatatgt tgctacaagt gcttgacgat
     4081 ggtcgtttga ctgattctaa aggacgggtg gttgatttta gaaatacggt catcattatg
     4141 acttccaata ttggggctca agaaatgaaa caagataaat caatgggctt taatgttatt
     4201 gatccgctta aagaccataa agctatggag caccgtgttt tacaagattt aaaacaggcg
     4261 ttccggccag agtttatcaa ccgaattgat gaaacaattg tattccattc gctacaagaa
     4321 aaagaattga aacaaattgt tactttgctg actgctcaat taacaaaacg attagccgaa
     4381 cgcgatattc atgtgaaatt aactgaaggt gcgaaatcca aaattgctaa agacggatac
     4441 gatccagaat acggagcccg tcctttgaaa cgagctattc aaaaagaagt ggaagatatg
     4501 ctttctgaag aattacttcg tggtaacatt aaagtaggcg attacgtgga aattggtgta
     4561 aaagatggca agttagaggt tagaaaaaaa gacgcaccaa aaaagaaaac aactgcaaaa
     4621 aaggtaaaaa ctaaataaca aacacgcctc ccttaatcaa ttttgaaggg aggtttttta
     4681 tggaaaaatc aggattcgtg tcaaaaaaac gaatttgatg aaaaggatta acgcgaacag
     4741 atgatctgtg gtaaaatgga gcatatgtat ggagggatgt agaaatggct aaagcaaaaa
     4801 ggacaaccaa atttgtgtgt caggcatgtg gatatgaatc ggcaaaatgg atgggaaaat
     4861 gtccgaattg caacgagtgg aatcagatgg tagaagcttt ggagccgtca aaaaaatcac
     4921 gctcagcttt taatcatacg ggagaacctt cgaaagcgac tccaattact caaatagcaa
     4981 gtgaaacaga aaaacgtgtc gaaaccaata tgccggagtt aaatagagtt cttggcggag
     5041 gtgtggttcc aggatctatg gtacttgtcg gtggggatcc tggtatcggg aagtcgactt
     5101 tattactgca agtttcagct caactgacgc tcacaaataa aaaagtattg tatatatcag
     5161 gagaagaatc tatcaaacaa acgaagctgc gggcggaacg cttgcaagtt tcgggagata
     5221 atttatatgt gtatgcagaa acaaatttag aagcagttca agaaacgatt gattttgtga
     5281 agcctgattt tgtagtcatt gactccattc agactgttta tcatcccgat gttacaagtg
     5341 cagcggggag tgtttcgcaa gttagggaat gtacagcgac attgatgcga attgctaaaa
     5401 tgcaaaacat tgctatcttt attgttggac atgtaacgaa ggaaggtgct attgcggggc
     5461 cgcgcctact tgaacatatg gttgatactg tgctttattt tgaaggggag cgtcatcatg
     5521 cttaccggat tttgcgtgca gtgaaaaacc gttttggttc cactaatgaa atgggtatat
     5581 ttgaaatgcg agatgttgga cttgtagaag ttgctaatcc ttccgaagtg ttcttggaag
     5641 aacgtcttga aggcgcttca ggttcaacgg ttgtagcttc tatggaagga actcgccccg
     5701 tccttgtgga aatacaagcg cttgtttcgc ctacgatgtt tggtaatgct aagcgaatgg
     5761 cgacaggaat agactataat aaagtttcgc taattatggc tgttttagaa aagcgagtag
     5821 gtttaatgtt gcaaaaccaa gatgcttatt tgaaagcagc tggtggggtt aaattggatg
     5881 aacctgcagt ggatttggcg gttgcagtca gtgttgcatc tagctatcgt gataaaccaa
     5941 caagaagtac ggattgcttt attggagaac ttggacttac aggtgagatt cgtcgtgttg
     6001 caagaattga acaacgcgta caagaagccg caaaacttgg ctttaagcga atttttattc
     6061 ctaaaaataa cgaaggtaat tggaaaatac cgaaagacgt gcaagtggtt ggggtggaaa
     6121 cgattggaga agctttgaag aaagctttac cagattaaaa ctaaatactt cgttgattcc
     6181 gtgagtacta tttgcggtat agtcttttaa tagtgtaaaa tagtgctata tgtatatttg
     6241 gtaatagccc aattatatat ataaattaaa aatggaaagg aggaaactaa atgcttacat
     6301 gggtaattcg agtgtgtttt
//
LOCUS       DASDYK010000129         6302 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.129, whole genome shotgun sequence.
ACCESSION   DASDYK010000129 DASDYK010000000
VERSION     DASDYK010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6302
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.129"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..480
                     /locus_tag="U0308_002548"
     CDS             <1..480
                     /locus_tag="U0308_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2317504.1"
                     /translation="IQGKGTFLNYFTLLDRSNNHFNFKTLSGCSLYKYSKADMEYFLS
                     MFPENFGFQFFIMKNQTTHIYFKSLMASSPASEKLKTTFSNMALLHGVLSDDDTVILP
                     QAIKTSHLLSYSNLSKSCFYKDLQHLKTTNQIEKKEKSWIIHDQELYAMIQNGQTSF"
     gene            complement(484..1290)
                     /locus_tag="U0308_002549"
     CDS             complement(484..1290)
                     /locus_tag="U0308_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEM2317505.1"
                     /translation="MEMFLYGFMQRAFQASMIIAIIAPLLGVFLIIRRQSLMADTLSH
                     VSLAGVAFGLVLNVNPSVTTLIVVVIAALGIEYLRGVYATYSELSIAILMAGGLAVAL
                     VLMSLDQGGITTSVQQYLFGSIVTISKAQVQLLVILGIAIVVLFLVFKRFMFVLTFSE
                     DVAVAEGVPVRLISLLFSVVTGIAIAVIMPIAGALLVSALIILPAAIGMRISKGFLMC
                     VISAILIGLVGMFSGLVSSYQLGTPPGATITLMFIILFIISTVVLKMARK"
     gene            complement(1239..1943)
                     /locus_tag="U0308_002550"
     CDS             complement(1239..1943)
                     /locus_tag="U0308_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEM2317506.1"
                     /translation="MKYIDIANIGFKYESEPVLENISFQVSAGEFIILTGENGAAKST
                     LLRIILGILQPDKGSVTFAKKNADGGRLLTGYVPQQIASFNAGFPSTVLELVRSGRFP
                     NGKWFKRLTTKDHAHVEKALKSVEMWDYRHKRIGELSGGQKQRICLARMFATDPDILI
                     LDEPQTAMDKQSKIRFYDLLRHEAQVHGKAILMVTHDSEEMEDFVDKHIRLIRKEDVS
                     WKCFSMDLCKEPSKHQ"
     gene            complement(1956..2897)
                     /locus_tag="U0308_002551"
     CDS             complement(1956..2897)
                     /locus_tag="U0308_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEM2317507.1"
                     /translation="MKKWSFLVVTVLAFVLVLAGCGASNNKVSGDKDKLKVVTTFYPM
                     YDFTKNVAGDNASIEMLIDAGTEPHDYEPSAKDIAKIEAADVFVYNSEDMETWVPSVL
                     KSLDSKKLTVIYASKGIELVEGTEEEDHDHEHEEGHHHEHDPHVWLSPVLAEQEVTNI
                     QNGLTKADKTNADTYKKNAETYKEKLKTLDNKFKTAFEGAKQRDFVTQHAAFQYLAKE
                     YDLHQVAIAGLSPDQEPSPARLAELQKYVKENNISTIYFEEVASPKVAETLANETGAK
                     LEVLSPIEGITDKEQKKGMDYIAYMEQNLQALQKTIK"
     gene            3120..4775
                     /locus_tag="U0308_002552"
     CDS             3120..4775
                     /locus_tag="U0308_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2317508.1"
                     /translation="MHFLKKTLPIFAILTVLLLTACGNDNEKSTTKTSPDKIKFLETS
                     ELLTLNTTAEEDFASFTAQNQVFEGLYTLDQKDNFVPGVADGMPEISADQTKYTIKLK
                     KNAKWSDGSQVTADDFVYAWRRAVDPKTAPGYSALFKDSIKNATEINEGKLPVTDLGV
                     VATDPTTLEITLKKPVPYFISLLSFETFFPQKESFVKKQGDKYGTDSAHTLYNGPFVM
                     KDWGGNITNKWTYAKNDQYWDKDNVKVNEIDVQVAKDINAGVNLYNTNEADRVPLSGD
                     FAKQYKDKKDFQTEKDALISYLRMNQKRDGKATPLANNSLRHALNLAVDKKQLTDRIL
                     GDGSFPANGLLPKDFVQNPTTGADFRTDSGDHLVYNKEEALKYWKQAQKELGTDKVTI
                     ELLGDDQETTKTIFAYLKAQFEDNLPGVTIKVKNMPSKSATQLTSDGNYDLSLAAWMP
                     DFKDPWTYSSLFLSDYFNNHMSYNSPAYDKLVKSTDTTLATKPEERWNAFVASEKVLL
                     DDDAAILPLYQHQTAVLQRTDITGVQKHAFGSPYSYKFIRVEK"
     gene            complement(5053..5409)
                     /locus_tag="U0308_002553"
     CDS             complement(5053..5409)
                     /locus_tag="U0308_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317509.1"
                     /translation="MINSRFYEGFEGEAEISFVAGDNKLVIWNGYFETILDNLLDCNV
                     EREGVLKEFFNHEGWYDDSPWMIEDNSLTITQLKCFDISKINQTSMKDDLEEVVKTII
                     SFFENNRFSKIYIEYE"
     gene            complement(5415..6209)
                     /locus_tag="U0308_002554"
                     /pseudo
     CDS             complement(5415..6209)
                     /locus_tag="U0308_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917489.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         1905 a         1305 c         1074 g         2018 t
ORIGIN      
        1 attcaaggta aaggaacatt tttgaactat tttacattac tcgaccgaag taataatcat
       61 ttcaatttta agactctctc tggatgttca ttatataagt attcgaaagc agatatggag
      121 tattttcttt caatgtttcc cgaaaatttc ggattccaat ttttcataat gaaaaaccag
      181 actactcaca tttactttaa aagcttaatg gcaagtagtc cggcttctga aaaacttaaa
      241 acgacctttt cgaatatggc tttgttacac ggggttctga gtgatgatga cacagtaatt
      301 cttcctcaag caattaaaac aagtcatcta ctttcttata gtaatctttc gaaaagctgt
      361 ttttacaaag atttgcagca tctcaaaaca accaatcaga ttgaaaagaa agaaaaaagt
      421 tggattattc atgaccaaga gctttatgca atgatacaaa atggtcaaac atcgttctaa
      481 aaatcatttc cgtgccattt ttaaaacaac ggtcgaaata atgaaaagaa tgataaacat
      541 taaggtaatt gttgcgccag gtggggttcc tagttggtag gaagacacaa ggccggaaaa
      601 cattccgact aagccaatca gaattgcact aataacacac atcaggaacc cttttgaaat
      661 tcgcataccg attgcagctg gtaatataat aagtgctgaa acgagtaacg ctccggctat
      721 tggcataata acagcaatcg caatcccagt aaccacactg aataaaagcg aaatcaaacg
      781 cacagggact ccttctgcaa ctgcaacatc ttcactaaaa gtaagtacaa acataaacct
      841 tttaaacact aagaacaata ctacgatagc tattcctaaa attaccaaca gctgcacttg
      901 cgccttactg attgttacaa tcgaaccaaa taagtattgc tgcacgcttg ttgtaattcc
      961 accctgatcc aaactcatca acactaacgc cacagcaagt ccaccagcca ttagtatcgc
     1021 aatggacaac tctgaataag ttgcataaac cccgcgcaaa tactcaatcc cgagcgccgc
     1081 aataactact acaataagcg ttgtcacact gggattcaca tttaaaacca acccaaaggc
     1141 cacacctgca agcgacacat gcgaaagcgt atccgccata agtgactgtc ttcgaataat
     1201 caagaaaact cctaaaagag gagcaattat agcaattatc attgatgctt ggaaggctct
     1261 ttgcataaat ccatagagaa acatttccat gacacatcct cctttctaat aaggcgaata
     1321 tgcttatcga caaaatcttc catttcttca ctatcgtgcg ttaccattaa aatcgcttta
     1381 ccatgtactt gtgcttcatg ccttaataaa tcataaaaac ggattttact ttgtttatcc
     1441 attgccgttt gcggttcatc caaaattaat atatctgggt cggttgcaaa cattcgggcc
     1501 aggcaaatcc gttgtttttg accacctgat agctcaccga tacgtttatg ccgataatcc
     1561 cacatttcta cagatttcaa tgctttttca acatgcgcat gatcttttgt agtcagccgt
     1621 ttgaaccatt taccatttgg aaaacgacct gaccgtacta gttcgagaac tgtacttgga
     1681 aaacccgcat taaatgatgc tatttgttgt ggtacataac ctgtcaaaag tcgcccgcca
     1741 tctgcgttct ttttggcgaa agtaacggaa cctttatcgg gttgtaaaat gcccaaaata
     1801 atacggagca gtgttgattt agctgctccg ttttctcctg ttagtataat aaattctccc
     1861 gcactcactt gaaaagaaat gttttcaagc actggttcgg attcgtattt aaaaccaata
     1921 ttggctatat cgatgtattt catttgatcg cttccttatt ttattgtttt ttgcaaggct
     1981 tgtaagtttt gttccatata agcaatataa tccatgcctt ttttctgttc tttatccgta
     2041 attccttcga tagggcttag tacttctagt tttgctcccg tttcgtttgc aagtgtttct
     2101 gcaacttttg gtgaagctac ttcttcaaaa taaatggtgc tgatattatt ttctttcacg
     2161 tatttttgta attccgctaa tcgtgctggg cttggttctt ggtcaggtga aaggccggcg
     2221 attgccactt gatgcaagtc atactctttt gctaaatatt ggaaggctgc atgttgggtt
     2281 acgaaatcgc gttgttttgc tccttcaaaa gctgttttaa atttgttgtc gagtgttttt
     2341 aatttctctt tatatgtttc tgcgttcttt ttgtatgtat ctgcatttgt tttatctgct
     2401 tttgtaagac cgttctggat attagtcact tcttgttcgg caaggactgg gcttagccat
     2461 acgtgaggat catgttcatg gtggtgtcct tcttcgtgct catgatcatg gtcttcttct
     2521 tcggttcctt ctactagctc gattccttta ctcgcgtaaa tcacggttaa ttttttcgaa
     2581 tctaagcttt taagtacgct cggcacccaa gtttccatgt cttcactgtt ataaacgaaa
     2641 acatcagccg cttcgatttt ggcaatatcc tttgcgcttg gctcgtaatc atgcggttct
     2701 gtccccgcat caatcaacat ttcaatggaa gcattatctc ccgcaacatt tttcgtaaaa
     2761 tcgtacattg gataaaaagt tgtcactacc ttgagcttgt ccttatctcc acttacttta
     2821 ttgttgctag caccgcatcc ggccaaaact aaaacgaacg ccaacactgt tacaactaaa
     2881 aatgaccatt ttttcatatt acctctcctt tttcgtaatg attacgattt aaaacttaaa
     2941 gttacactat gtaaattatg attgcgtatc gcaaaacgta atcattctta tttgcacaaa
     3001 atatcttatc acgggattat ttttgcgtca agcagttttt ttgccaaatc attaacttga
     3061 cttatcttat cggaatactt ataataacga taaatacaca gatagaaggg gagaaaacca
     3121 tgcatttttt aaagaaaaca ttgcctattt ttgccatttt gacagtactt ttacttacag
     3181 cttgcggaaa tgacaatgaa aaatctacga caaaaacttc cccggacaaa attaaatttc
     3241 ttgaaaccag tgaattactg actttaaata cgacagctga ggaagacttt gctagcttca
     3301 ccgcgcaaaa ccaagtcttc gagggattat acacacttga tcaaaaagat aactttgttc
     3361 ctggggttgc tgatggaatg ccagaaatca gcgctgacca aacgaaatac accattaaat
     3421 taaagaaaaa tgcgaaatgg tccgatggtt ctcaagtaac cgctgatgat ttcgtctacg
     3481 cgtggcgccg tgccgttgat ccaaaaaccg cacctggata ctccgcgctc ttcaaagatt
     3541 cgattaaaaa cgccactgaa atcaatgaag gcaaactacc tgtaactgac cttggtgtcg
     3601 ttgctactga cccaacaacg cttgaaatca cactaaaaaa accagttccc tacttcattt
     3661 cacttctttc ttttgaaaca tttttcccac aaaaagaaag ctttgtgaaa aaacaaggcg
     3721 acaaatacgg gacagatagt gcgcacactt tgtacaatgg tccttttgtt atgaaggatt
     3781 ggggcggcaa cattacgaat aaatggactt acgcgaaaaa cgaccaatat tgggacaaag
     3841 ataatgtcaa agtaaatgaa attgatgtgc aagtcgcgaa agatattaat gccggcgtga
     3901 acctttataa tacaaacgaa gctgaccgcg tgccactttc aggcgatttt gcgaaacaat
     3961 acaaagacaa gaaagatttc caaacggaaa aagatgcgct catcagttat ttgcgcatga
     4021 atcaaaaacg cgacggtaaa gcgactccac ttgcgaacaa ttccttgcgt cacgcgctta
     4081 atttagctgt cgataagaaa caattaacgg atcggattct cggggacggc tcattcccgg
     4141 cgaatggact gcttccaaaa gatttcgtcc aaaacccaac aacgggcgct gatttccgta
     4201 cagatagcgg cgaccattta gtttataaca aagaagaagc tttaaaatat tggaaacaag
     4261 cacaaaaaga acttggcact gacaaagtaa caatcgaact tctcggcgat gaccaagaaa
     4321 caacgaaaac cattttcgct tatttgaaag cgcagtttga agataatttg cctggtgtga
     4381 cgattaaagt gaaaaatatg ccttcgaaga gcgcgacaca gctaacttct gatggtaatt
     4441 atgacttgtc actggctgct tggatgcctg attttaaaga tccgtggacg tatagcagct
     4501 tattcttatc cgattacttt aataaccata tgagttacaa cagccccgct tatgataaac
     4561 ttgtaaaatc aactgataca acacttgcga cgaagcctga agaacgttgg aatgcgttcg
     4621 tagcttctga gaaagttctg cttgatgatg acgcggcgat cttaccactt tatcaacatc
     4681 aaacagcagt gttgcaacgt acggatatta ccggcgtgca gaaacatgct tttggttcgc
     4741 cttatagtta taagtttatt cgggtggaga agtaattcgc cagtttggaa aaagccagca
     4801 attttaaaaa ttgctggctt tttgatttat aaattctatc tttgcaagta agcgtgtatc
     4861 ttatttacta acgacaccaa tcagataaat gaacttaatt tatatattaa aaagtatcgc
     4921 aaatataaca ataggctgga acatatagga ttctgaaaag cctcaagtgt tccaacctat
     4981 tatttaatca ttaatattta acggaatttc ttctttctta ttttcggata agtcgtggta
     5041 tgccttttat tcttattcgt attcaatata gattttacta aatcgattat tttcaaaaaa
     5101 tgaaataatt gttttaacta cttcctctaa atcatctttc attgaagtct gattgatttt
     5161 gctaatatca aaacatttta attgagtaat ggtaagagag ttatcttcaa tcatccacgg
     5221 tgaatcatca taccatccct catgattaaa gaattctttc agaactccct ctctttctac
     5281 attacaatct aataagttat ctaaaatagt ctcaaaataa ccgttccaaa ttacaagttt
     5341 attatcacca gcaacgaagg aaatctctgc ttctccttca aaaccttcat aaaacctact
     5401 attaatcatt tagttcattc cttccaatga cctttatcta aaatttttat ttgttctgga
     5461 gtagcatttc ctgcttttct tgcgtttata gcatcatacc atttatatcc ttctacccac
     5521 tcatcatcac caattttgaa gaatgtttgt ggcttgtccc ctccatttcc aggaactgtt
     5581 ctttggacaa cccatgtatt cccctgctct aaaggtgctt ctggagttct tgtatgccat
     5641 cgcacttcat acttaaattg accatcattc catttataag taatttgttc atagccagct
     5701 ttttttgtct gggcttttat tttagcgtta tctggaattg cgattggtgc ttttttcttg
     5761 tatttatttg ctagtttcaa ttgttccttt tcggataaag tagatagttt gggtgctttc
     5821 gaacgcctat tcttaatatt gtttaataat tttttaggaa tcttcaattt ttttccttta
     5881 tacccaccag aagtgtagta aaagataaag ccacttataa tactaaaccc ttgcgcttta
     5941 cttatctctt gcccagtaac cgggtctatt ccttctttca ccgattgaat aactgcctgc
     6001 aacaactcgg cttcttcttg cgcttcattg ctttcatgtg gtaattcccc gttaagcacg
     6061 gcggcattgt acgcgttcgt tgcttcaaca tctactatac catttttcat tagcacccac
     6121 atttgaccac ggtacgtttt ttgatattcg tcaaaattga atgttgtttc gttgtttttt
     6181 agcgcttttc ctaaggcgtt ttgcatccga ggctatgagg aaggttttga aagtgaagta
     6241 aataaagaat atatactgct acatagagaa tgattggaat gagttaactt taaatgtcaa
     6301 aa
//
LOCUS       DASDYK010000130         6129 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.130, whole genome shotgun sequence.
ACCESSION   DASDYK010000130 DASDYK010000000
VERSION     DASDYK010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6129
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.130"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            164..790
                     /gene="isdC"
                     /locus_tag="U0308_002555"
     CDS             164..790
                     /gene="isdC"
                     /locus_tag="U0308_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme uptake protein IsdC"
                     /protein_id="HEM2317510.1"
                     /translation="MKKVLVLAAFIALFSFSFLSTGLTAQAALKDGTYSVDYTVLQGD
                     SDSVSMANDYFDKPATVTVNGGKSTVSLQVNHSKWITGLWVEGSAVSVTSKNTANDTR
                     KVSFPVSTLSSPVNAKIKVDIDDDDLNYHHEYQIKLRFDEGSAKALAGAVKSSDNNDT
                     ATPATKSDSSNKVANPKSSDSSQMFLYGIIFVAAGTGLVLLKRRAIFK"
     gene            803..2512
                     /gene="hbp2"
                     /locus_tag="U0308_002556"
     CDS             803..2512
                     /gene="hbp2"
                     /locus_tag="U0308_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin/hemoglobin-binding protein Hbp2"
                     /protein_id="HEM2317511.1"
                     /translation="MKKLWKKGLVAFLALTLIFQLIPGFANAADSRLKDGGEYQVQVN
                     FYKDNTGKTTKESSEADKYIDHTATIKVENGQPYMYLTITNSTWWQTMAVSKNGARPE
                     KPAQADVYQDRYEDVQTVSTDAAKDTRVEKFKLSSLDDVIFSYMHIKVDAISYDHWYQ
                     VDLTIDPSTFKVISEPAITTPVTLSDGIYTIPFVAKKANDDSNSSMQNYFNNPAWLKV
                     KNGKKTVAMTVNDNKTVTALKTNLAGALQDVKVVSEDKDANTRIVEFEVEDLNQPLAA
                     HVNYEAPFNGSVYKGQADFRYVFDTTKATAASSYPGSDETPPVVDPGETKPPVTKPDP
                     GTTNPPVTTPPTTPSKPAVVDPKNLLNNHTYSIDFDVFKDGTTETSMMESYVMKPALI
                     KVENNQPYVYLTLTNSSWIKTFQYKANGVWKDMEVVSGDINKNTRTVKYPVKDGRANT
                     DVKTHVLIEDMPGFSYDHEYTVQVKLNAATIKDITGEDVTLKEPVKKDILNTGNVANN
                     NNAGPKLAKPDFDDTNSVQKTASSTEKNAKTNDSSSMAWYVTLFGASFLYLAYRLKRK
                     RLS"
     gene            2599..3471
                     /gene="isdE"
                     /locus_tag="U0308_002557"
     CDS             2599..3471
                     /gene="isdE"
                     /locus_tag="U0308_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     IsdE"
                     /protein_id="HEM2317512.1"
                     /translation="MRKMAVISLMLLLFLVGCGKEEAAQKPEQKSEKEPKIVATTVAI
                     TEIMDKLDLPLVGIPTSSKKLPERYADVKETGSPMGPDLEIIRMLKPDMVLSTKTLEA
                     DLKAGFEGADLKADFLDFTSIASMQTEIKKLGAEFDRKEEAAKLNGDLTNEIDKVKSS
                     VAKKKKPTVLILMGVPGSYLVVTEHAYIGDLVKLAGGENVIKDQKVEYLASNTEYLQS
                     ANPDIILRAAHGMPAEVVKMFDEEFKTNDIWKHFDAVKNNRVYDLDENLFGMTASLNA
                     PEALQEMEKMLYDN"
     gene            3461..4450
                     /locus_tag="U0308_002558"
     CDS             3461..4450
                     /locus_tag="U0308_002558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEM2317513.1"
                     /translation="MTIKQKSSFGAVIILLIGTILWAVQAGSLSMSIPAFLSGVFSGG
                     NEMVNVVIDLRFPRIIIALLAGAALSVSGLLLQAVMRNPLADAGVIGISAGAKFFSFV
                     IILFLPELYFWLPLFSFIGGALAFFLVFLFSYRSDFNPLRFIIIGIAINAVFTGLSDA
                     LSSQVALVSSQSASSAASLAMKKWSDVETLLIYVTIGLICALLLAKWCNVLGLENKMA
                     RGFGVPVNKTRIWLALIAVLLASITTAVVGVIAFVGLLVPHIARKLVGGNYQILVPFS
                     ILFGALLLLFADTLGRTLFQQMEIPASVIMLIIGGPFLIFLMRKGDFYGSKGR"
     gene            4431..5210
                     /locus_tag="U0308_002559"
     CDS             4431..5210
                     /locus_tag="U0308_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317514.1"
                     /translation="MEVRDVNFSYNGTESTLKNVSFTIQKNKINTIVGPNGSGKSTLL
                     EILARLLSPDSGDVLLEGKSIFEWKAKEFAQNVAIVHQNNVLPNELTVKELLYFGRLP
                     YKNWRMTRTKADDLAVEQALMQTELTEKAEKFVDSLSGGERQRVFIATALVQDTPILL
                     LDEPTTFLDMYFQLEILELVKRLNQEKNLTIVMILHDLNQALMYSDHLIVMKNGKVVA
                     KGVPGELLTTELIAETYGVVAKVLNDANTGKYIVPQKRKEF"
     gene            5214..5954
                     /gene="srtB"
                     /locus_tag="U0308_002560"
     CDS             5214..5954
                     /gene="srtB"
                     /locus_tag="U0308_002560"
                     /EC_number="3.4.22.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class B sortase"
                     /protein_id="HEM2317515.1"
                     /translation="MKIKSFLGKSLTLVVLVVFLFSGWKIGMELYENKHNQTILDDAK
                     AVYTKDVATTNVNGEVRDELRDLQKLNKDMVGWLTIADTEIDYPILQSTDNDYYLHHN
                     YKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLAAHPTFS
                     YESGLANYEVEIFAVYETTTDFYYIETEFPETTDFEDYLQKVKQQSMYKLNVKVSGKD
                     RIITLSTCDTEKDYEKGRMVIQGKLVTK"
     gene            6015..>6129
                     /locus_tag="U0308_002561"
     CDS             6015..>6129
                     /locus_tag="U0308_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siphovirus Gp157 family protein"
                     /protein_id="HEM2317516.1"
                     /translation="MKLYELTDNYLKVQEFLEENNTDAVKDTLDALTDSFHD"
BASE COUNT         1968 a          887 c         1390 g         1884 t
ORIGIN      
        1 tttgcgtttt taatttgtga aaaagcaatc tgttgttgac aatgataatc attatcaatt
       61 aaaatgataa ttaacgtatc cttttacata aacttttact ccacttttat tagtgggggt
      121 tttttataaa tagtagtttt tattaaagaa gggagattta agtatgaaga aagttttagt
      181 tttggctgct tttattgcct tattcagttt ttcgtttctt tctacgggat taacggcaca
      241 agctgctctt aaggatggca cctattcggt tgattatacg gtactacaag gggatagtga
      301 ttccgtatct atggcgaatg actattttga taagcctgca acggtaactg taaatggagg
      361 caaatctact gttagtttgc aagtgaacca tagtaagtgg attactggtt tatgggtcga
      421 aggtagtgcg gttagcgtga cttcgaaaaa tacagcgaat gatactcgaa aagtgtcgtt
      481 tcctgtgtcg actttaagta gtcctgttaa tgcaaaaatc aaagtagata ttgatgatga
      541 cgatttaaat tatcatcatg agtatcaaat caagttacgt tttgatgaag gttctgctaa
      601 agcattagct ggcgcggtaa agtcttctga taataacgat acagcaaccc cagcaacaaa
      661 aagtgactca agtaataaag tagcaaatcc gaagtctagt gattctagcc aaatgttttt
      721 atatggaatt atttttgttg cagcagggac agggttagtt ttacttaaaa gacgtgcgat
      781 ttttaaataa agggggatta tgatgaagaa attatggaaa aaaggtttag tagctttctt
      841 ggctttgaca cttatttttc aattgatacc tggttttgct aatgcggctg attctcgtct
      901 gaaagatggc ggggaatacc aagttcaagt gaatttttat aaagataata cagggaaaac
      961 aacgaaagaa tcttcagagg cagataaata tattgaccat acagcaacga ttaaagtaga
     1021 aaatggtcaa ccttatatgt acttaacaat tacaaatagt acttggtggc aaacaatggc
     1081 ggtttcaaaa aatggggctc gtccagaaaa gccagcacaa gcggatgttt atcaagatcg
     1141 ttatgaagat gttcaaacag tgagcacaga cgcagcgaaa gatacgcgtg tagagaaatt
     1201 caagcttagt tctttagatg atgttatttt ctcttatatg catattaaag tagatgcaat
     1261 tagttatgat cactggtatc aagtggattt aaccattgat ccaagtactt tcaaagttat
     1321 ttcagaaccg gctattacaa cacctgtgac tctttcggac ggaatttaca cgattccttt
     1381 tgtagcgaaa aaagcaaatg atgatagcaa ctcaagcatg caaaattatt ttaataatcc
     1441 tgcttggctg aaagtgaaaa atgggaagaa aactgttgca atgacagtaa atgataataa
     1501 aacagtaaca gctttaaaaa caaatcttgc tggagctttg caagatgtca aagtagtttc
     1561 tgaagataaa gatgcaaaca cgcgtattgt ggaatttgaa gtggaggatt taaatcaacc
     1621 acttgcggct catgttaatt atgaagcgcc gttcaatggt tctgtataca aaggacaagc
     1681 agacttccgt tatgtgtttg atacaacgaa agcaactgcg gctagttcgt accctggtag
     1741 tgatgagacg cctcctgtag tagatccagg cgaaacaaaa ccaccagtaa caaaacctga
     1801 tccaggtaca acgaatccac cagtgactac gccgccaaca acaccaagta aaccggcagt
     1861 agttgatcct aaaaatttac tgaataacca tacgtactcc attgattttg atgtatttaa
     1921 agacggaaca acggaaactt ctatgatgga aagctatgtg atgaaaccgg ctttaatcaa
     1981 agtagaaaat aaccaacctt atgtttattt aactttaaca aacagtagct ggattaaaac
     2041 tttccagtat aaagcaaatg gtgtttggaa agatatggaa gttgtttccg gagatatcaa
     2101 caaaaatacg agaaccgtca agtatcctgt aaaagatggc agggctaata cagatgtaaa
     2161 aacgcatgta ttaattgaag atatgccagg cttctcttac gaccatgagt atacggttca
     2221 agtaaaactt aatgcagcaa caattaaaga tattaccggg gaagatgtaa cgttaaaaga
     2281 accggtgaaa aaggatattt taaatactgg caatgtagcg aataacaata atgctgggcc
     2341 aaaattggca aaacccgatt ttgatgacac aaattctgtt caaaaaacgg caagtagcac
     2401 agaaaaaaat gcgaaaacga atgattcatc aagtatggca tggtacgtta cgttatttgg
     2461 agcttccttc ctttatttag cttatcgatt aaaacgtaaa agattgagtt aataaaacta
     2521 gtaaaagcga gttaggttgg gggtttcctt tgcttaactc gctttaccga ttttatttta
     2581 taaatggggg aattagtgat gaggaaaatg gctgtcatat ctttgatgtt attacttttt
     2641 ttagttggct gtggaaagga agaggcggct caaaagcctg aacaaaaatc ggagaaggag
     2701 ccaaaaattg tggcgactac ggtagcgatt acggaaatta tggataaact tgatttgcca
     2761 ctcgttggaa ttccgactag ttctaaaaaa cttccggagc gttatgcaga tgtaaaggaa
     2821 actgggtcgc ctatggggcc tgatttggaa attattcgga tgttgaagcc agacatggtc
     2881 ctttcaacga aaacgctaga agcggactta aaggctgggt ttgaaggggc cgatttaaaa
     2941 gcggactttc tagactttac gagtattgcc tcgatgcaaa cagaaattaa aaaacttgga
     3001 gcagaattcg atcgtaaaga ggaagcagct aaattaaatg gtgatttaac gaatgagatt
     3061 gataaggtga agtcgagcgt ggcgaaaaag aaaaagccaa ctgttcttat tctgatgggg
     3121 gttccgggca gctacttagt tgtaacggaa catgcgtata ttggtgattt ggtcaaactt
     3181 gctggtggag aaaatgtcat taaggaccaa aaagtagaat atttagcttc taatacagaa
     3241 tacttacaaa gtgccaatcc tgatattatt ttgcgggcgg ctcatggtat gcctgctgaa
     3301 gtggttaaaa tgtttgacga ggaatttaaa acaaatgata tttggaaaca ttttgatgcg
     3361 gtgaaaaata atcgggtgta tgatttggat gaaaatttat ttggtatgac agcgagtttg
     3421 aatgcaccag aagcactaca ggaaatggaa aagatgcttt atgacaatta agcaaaaaag
     3481 ttcttttggg gctgtaatta ttttattgat tgggactatt ttgtgggcag ttcaggcggg
     3541 aagtttgtcg atgtcgattc cagctttttt gagtggggtt tttagtggcg gaaatgagat
     3601 ggtgaatgtc gtgattgatt tgcgatttcc gcgaattatt attgccctgc tagctggtgc
     3661 ggcgctatcg gtttcagggt tgttacttca agctgtgatg cggaatccgc ttgctgatgc
     3721 tggggtgatt gggatttctg cgggtgcgaa attttttagt tttgtgatta ttttattttt
     3781 accggaatta tatttttggt tgccactttt ttcttttatt gggggagcac tggctttttt
     3841 tctagtcttt ttgtttagtt atcgttctga ttttaatccg cttcgtttta ttattattgg
     3901 gattgcgatt aatgcggttt ttacagggct gagtgatgcg ttatcttcgc aagtggcgct
     3961 tgtttctagt cagtcggcca gtagtgctgc aagtttggca atgaaaaaat ggtccgacgt
     4021 ggaaacttta ttgatatatg taacgattgg actgatttgc gcgcttttac ttgctaaatg
     4081 gtgcaatgtg ttggggcttg agaataagat ggctagaggc tttggtgtgc cggttaataa
     4141 gacacgtatt tggctggcat tgattgctgt actccttgcg tcaattacca cggcggtagt
     4201 tggtgttatt gcgtttgttg gtttacttgt accacatatt gccagaaaac tagttggcgg
     4261 aaattatcaa atacttgtgc cgttttcaat attatttggg gctttattgc tacttttcgc
     4321 ggatacgcta ggcagaacgt tatttcagca aatggaaatc ccggcatctg tgattatgct
     4381 tattattggt ggtccattct taatcttttt aatgcgaaag ggtgattttt atggaagtaa
     4441 gggacgttaa ttttagttat aatggaacag agtctacctt aaaaaatgtc tcatttacga
     4501 tccagaaaaa taaaatcaat acgattgttg ggccaaatgg tagtgggaaa tctactttat
     4561 tagaaatttt ggctagactt ctttcgcctg attctgggga tgttttactg gaagggaaat
     4621 cgatttttga atggaaagca aaagaatttg cgcaaaatgt agcgattgtt catcaaaata
     4681 acgttcttcc gaatgaacta acggtgaagg aattgcttta ctttggtcgt ctaccttata
     4741 aaaattggcg aatgactcgg acgaaggcgg atgatctggc tgttgagcag gctttgatgc
     4801 aaacggagct aactgaaaaa gcggagaaat ttgttgatag tctttctgga ggagagcggc
     4861 agcgtgtttt tatagcaaca gcattggttc aagatacacc tattttgctg ttggacgagc
     4921 cgacgacatt tctggacatg tattttcaac tagaaatttt agagttagta aaacggttaa
     4981 atcaagaaaa aaatttgact attgtaatga ttttgcatga cttaaaccaa gcgttgatgt
     5041 atagtgacca tttgattgtg atgaaaaatg ggaaagtggt tgcaaaagga gtaccaggag
     5101 aattactaac aacggagctg attgctgaaa cttatggtgt agttgcgaag gttttaaacg
     5161 atgcgaacac tgggaaatac attgttcctc aaaagcgaaa ggagttttaa agagtgaaaa
     5221 taaaatcgtt tttggggaaa agtttgacct tggttgtgtt agtggttttt cttttttctg
     5281 gatggaaaat tggaatggaa ctgtatgaaa ataagcataa ccagacaatc ctagatgatg
     5341 cgaaagctgt ttacacaaaa gatgttgcta ctacaaatgt gaatggtgaa gtacgtgatg
     5401 agcttagaga tttgcaaaaa ttaaataaag atatggttgg gtggctgacg attgcagata
     5461 cggaaataga ttatccaatt ttgcaaagta cggataatga ttactattta catcacaatt
     5521 ataaaaatga aaaagcacga gcgggcagta tttttaaaga ttatcggaat acgaatgagt
     5581 ttttggataa aaatacgatc atttatgggc ataatatgaa agacggatcc atgtttgcgg
     5641 atttacgtaa atacttggac aaagattttt tggcggctca tccaacgttt tcctatgaat
     5701 cgggcttggc gaattatgaa gtggaaatct ttgctgtgta tgaaacgacg actgattttt
     5761 attacattga aacagaattt ccggaaacaa ctgattttga ggattattta caaaaagtga
     5821 aacaacaatc tatgtataaa ttaaatgtaa aagttagtgg aaaggaccga attataacac
     5881 tttcaacttg cgatacagaa aaagattatg aaaaaggacg gatggttatt caaggaaaat
     5941 tagtaacaaa atgagaaagc accaaaatat aataacattt ggcgcttttt ccttttttgg
     6001 aaagggtgcg aacgatgaaa ctatatgaac taaccgataa ttatttaaaa gtacaagaat
     6061 ttttggaaga aaataatact gatgctgtga aagatacgtt agatgcgctt actgatagtt
     6121 ttcatgata
//
LOCUS       DASDYK010000131         6128 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.131, whole genome shotgun sequence.
ACCESSION   DASDYK010000131 DASDYK010000000
VERSION     DASDYK010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6128
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.131"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(23..952)
                     /gene="hemH"
                     /locus_tag="U0308_002562"
     CDS             complement(23..952)
                     /gene="hemH"
                     /locus_tag="U0308_002562"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEM2317517.1"
                     /translation="MTKKVGLLVMAYGTPYKDEDIERYYTDIRHGHKPSEEMIADLRG
                     RYHAIGGLSPLAKITEAQAYGLEKALNESQDEVEFKAYIGLKHIEPFIEDAVEAMHKD
                     GIEEAISIVLAPHYSSFSVEAYNKRAKDAADKLGGLRIKAINDWYKQPKFIQMWADRI
                     NETAKQIPADELLDTVLIVSAHSLPEKIKQHNDPYPDQLQETADFIFEKVVVPHYALG
                     WQSEGKTGEPWLGPDVQDLTRELYGREKYKHFIYTPVGFVAEHLEVLYDNDYECKVVT
                     DEVGAIYHRPPMPNSDPEFLEVLRTVVWEKYSN"
     gene            complement(949..2010)
                     /gene="hemE"
                     /locus_tag="U0308_002563"
     CDS             complement(949..2010)
                     /gene="hemE"
                     /locus_tag="U0308_002563"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEM2317518.1"
                     /translation="MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKYS
                     LFEITHQPEICAYVTKLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPI
                     RSFQDVEKLTMFKPEIEVPYVLDTIKLLADDMLDVPLIGFAGAPFTLASYMIEGGPSK
                     NYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYA
                     EYIRPVIEMIVREVKAVHPTTPIIMQAVGASHLLAEWETMPLDVVGVDWRETITSARK
                     KVPTKAIQGNLDPSTLLAPEKCLKEANRILQEGVLEPGYIFNLGHGVFPEVPPEMLKK
                     LTNYIHERSEILLKKDDIK"
     gene            2207..2710
                     /locus_tag="U0308_002564"
     CDS             2207..2710
                     /locus_tag="U0308_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEM2317519.1"
                     /translation="MKKVFITTGTEHYLRQLMANYIGGNVTLLQNFSQSLLYQESTGE
                     KLFQEGAEYRVLQSSGSLKGFGVVVFEYIHLRDEEIPIFLQMYQRASLHFSETPGLQS
                     TKLTKAMNMNKFLIISFWDSEVFFHDWKKTPLSKEITNIMKKNNTQSGFSHEDIYHYP
                     EFSHDAK"
     gene            complement(2749..3972)
                     /locus_tag="U0308_002565"
     CDS             complement(2749..3972)
                     /locus_tag="U0308_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317520.1"
                     /translation="MKMIFDSKALWKERFSAYTTEVMRYLRYMFNDHLLFVLVIGLGA
                     GIFYYAGWVKTLEPTFPVIPLMVILLTASIAISPVATLLKKPDIVYLIVQEKAMDSYF
                     TQAKIASFFMQLYVFVIVLGVCMPMYVEVTKVPYSQFFTLFIVLSMLKVWNIYFGWES
                     MKLEEADTTWMFIRVILNAILIYIALVAAPYISIPLVLVVLVASYYWLRTKTAKVTLR
                     WEYLVDKEEARMNRFYRLVNLFTDVPHLRGTVRRRSYLDFLYQPIPYAKRKTFAYLFS
                     RTFIRTNEYAGLYIRLTVIAVILLVFVQGFYLNIIFSLLFLYLTGFQFIPMLKHYDAQ
                     IMLRLYPINDRYRHRSFIHFLRILLLAQALLFSVIGIAQNGTISGMIILGINLAFVVI
                     FTFLYAPARMKKMYE"
     gene            complement(3956..4708)
                     /locus_tag="U0308_002566"
     CDS             complement(3956..4708)
                     /locus_tag="U0308_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317521.1"
                     /translation="MALVEVEHLTGGYTKRPVLKDISFAIEEKQIVGLIGLNGAGKST
                     TIKHITGLMHPKQGTIKINNHQLVEDTETYRKQFSYIPETPVLYEELTLKEHLELTGM
                     AYGISEEELQARMKPLLKEFRLEKKLNWFPAHFSKGMKQKVMIMSAFLIEPKLYIIDE
                     PFVGLDPLGIQSLLNWMDEMRSKGASILMSTHILATAEKYCDTFIIIHQGEIRAEGTL
                     KDLQTNFEMPGASLDEIYIQLTKEEEADEDDI"
     gene            4869..5291
                     /locus_tag="U0308_002567"
     CDS             4869..5291
                     /locus_tag="U0308_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEM2317522.1"
                     /translation="MDDCIFCKIVRGEIPSAKVYEDDEVYAFLDLGQVTEGHTLVIPK
                     KHARNTFDLPDETAAELFRRVPKIARALKEALPIQGLNILNNNEEVAFQSVFHCHIHL
                     IPRYSKSDDFGLKWKDNADWYTQERYQEIAELIAAKVD"
     gene            5321..5683
                     /locus_tag="U0308_002568"
     CDS             5321..5683
                     /locus_tag="U0308_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEM2317523.1"
                     /translation="MNKKSLIFGILAGGAIGAAASVLFAPKSGNELRKDIVAKSGEAS
                     VILKELAYNANELIQSVQVLGTEGSTLLKDVSSDIMESVSKWNEEMEPEKKRLKDEIK
                     DMQKTISDLEKTLKKDNK"
     gene            5866..>6128
                     /locus_tag="U0308_002569"
     CDS             5866..>6128
                     /locus_tag="U0308_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HEM2317524.1"
                     /translation="MRCLKSINTERRDEFNRLFLKGILVWLAAVCICFLTQHLIYPDQ
                     LTNDYQLASFLGIILIYPIHKLLHILGCFKYREGTVIQWRIHF"
BASE COUNT         1940 a         1199 c         1028 g         1961 t
ORIGIN      
        1 aatatcccgg caagtacttt atttaattgc tatatttttc ccaaacaacc gtccttaata
       61 cttctaagaa ttctgggtcc gagtttggca ttggtggtcg gtgataaatc gcgcccactt
      121 catcggtaac tactttacat tcataatcat tatcatataa aacctctaaa tgttcagcca
      181 caaatccaac tggtgtatag ataaagtgtt tatatttttc tcgaccgtaa agttctcttg
      241 ttaaatcttg tacatcaggt ccgagccacg gctccccagt tttcccttca ctttgccaac
      301 ctaacgcgta atgaggtact actacttttt cgaaaatgaa atctgctgtt tcttgcagtt
      361 gatctgggta cgggtcatta tgttgtttaa ttttctccgg taaactgtgt gcggaaacaa
      421 ttaaaacagt atccaataat tcatcagctg gaatttgttt tgctgtttcg ttaattctat
      481 cagcccacat ttgaataaat ttgggttgtt tgtaccaatc attgattgct ttgatacgaa
      541 ggccacctag tttatcagct gcatcttttg ctcttttgtt gtaagcttcg acgctaaagc
      601 tagagtagtg tggcgctaaa acaatcgaga ttgcttcttc tattccatct ttatgcatag
      661 cttctacagc gtcttcaata aaaggttcaa tatgttttaa accgatatat gccttgaatt
      721 ctacttcgtc ttgcgattca tttaacgctt tttctaatcc ataggcttgt gcttcagtaa
      781 tttttgcgag tggagataat ccaccaattg catggtatct tccgcgcaaa tccgcaatca
      841 tttcttcact tggcttatga ccatgacgaa tatctgtata gtaacgttca atatcttcat
      901 ctttgtacgg tgtcccgtat gccattacaa gtagacctac ttttttagtc attttatatc
      961 atcctttttt aatagaattt cgctacgttc atggatgtaa ttagttagtt tcttcaacat
     1021 ttctggtggt acttccggga aaacgccatg tcctaaatta aaaatataac ctggttctag
     1081 tacgccttct tgcaaaatac gatttgcttc ttttaaacat ttctctggtg caagaagtgt
     1141 ggacggatcc agatttcctt gaattgcttt tgttggaact tttttccgag cacttgtgat
     1201 ggtttcacgc caatcgacgc caacaacatc aagcggcatt gtttcccatt ctgctaaaag
     1261 atgactcgcg ccaactgctt gcataataat tggggttgtt ggatgaactg ctttcacttc
     1321 tctaacaatc atttcgatta ctggtcgaat gtattcagca tagtcagctc gactaagtgc
     1381 ccctacccaa gaatcaaaca attgcaccgc agaagcgccc gcattaattt gcgcaattaa
     1441 ataattcgca gtcattcgac caagtttttc cattagtatt gcccaaactt ctggctcgcg
     1501 atacataaaa ctttttgttt ggtgataatt tttcgatgga ccaccttcta tcatatagct
     1561 agccaaagta aatggtgcac ctgcaaagcc aattaaaggt acatctagca tatcatctgc
     1621 caataatttt atcgtatcta ggacataagg aacttctatt tctggtttga acattgtcag
     1681 tttttctaca tcttggaaag atctaatagg attatgtatg actggaccaa taccagattt
     1741 gatttcaacg tctactccca tccccggaag tggtgtcata atatctttgt ataaaatggc
     1801 tgcatcaaca ccatattgat ctactggtaa tttggttacg taagcacata tttctggctg
     1861 atgagtaatt tcaaatagag agtatttttc ttttaatttg cggtattctg gttgagatct
     1921 ccctgcttgt ctcatatacc aaaccggaat tcggtcaact tgttcttttc gcgctgcttt
     1981 taaaaataaa tcattcgtta tttttgtcat tgagtcgctt cccttctttg ttcatttaca
     2041 cacaatgggc aacagaacaa taaataactt ctccagataa aaggatacta gaaaatttgt
     2101 ataaaaccaa acaaattgcc tatcagctgt ttcaattatg aaaaacgtgg aaaataaagg
     2161 tgtaatcatt tttcttaatg gaataaaact gaaagaagga cttattatga aaaaagtatt
     2221 tatcacgact ggaacggagc actatcttcg tcaattaatg gcaaattata ttggcggaaa
     2281 tgtgacactt ctacaaaact tttcccaatc acttttgtat caagagtcga ctggtgaaaa
     2341 acttttccaa gaaggcgctg agtatcgagt attgcaaagc agtggttcct taaaaggttt
     2401 tggagtagtc gtctttgaat atatccacct ccgcgatgaa gaaatcccta ttttcttgca
     2461 aatgtatcaa cgagcgagtc tgcattttag tgaaacgcct ggcttgcaaa gtacaaaact
     2521 cacaaaagcg atgaatatga ataaattttt aattatttcc ttttgggatt ctgaagtatt
     2581 ttttcatgac tggaaaaaaa cacctttatc caaagaaatt accaatatca tgaaaaaaaa
     2641 taatactcaa tctggattct cacatgaaga tatttatcat tatccagaat tttcccatga
     2701 tgctaaatag gaaaaagcga tttggaccac tcatccaaat cgcttttttt attcgtacat
     2761 ttttttcatt ctggctggtg cataaaggaa cgtaaagata actacaaaag ccaaattaat
     2821 tcctaaaatg atcatcccac tgatggtccc attttgtgca atgccaatca cactaaagag
     2881 tagtgcttga gcgagtaaca aaatccgtag aaagtgaata aaactgcgat gacgataacg
     2941 atcattaatc ggataaagtc gtagcataat ttgtgcatca taatgtttta acatcgggat
     3001 gaattgaaaa ccagttaaat acaaaaatag tagtgagaaa atgatattta aataaaaacc
     3061 ttgaacaaac acgagtaaaa tcacggcaat tacggtaagt ctaatgtaaa gaccggcata
     3121 ttcatttgtt ctaataaatg tccgactgaa caaataagca aatgtttttc ttttcgcata
     3181 aggaattggt tgataaagaa aatcgagata actccgtctc cgaaccgttc ctcgcaaatg
     3241 aggtacatcc gtaaatagat tcactaaacg atagaaccga ttcatccgcg cttcttcttt
     3301 atccactaaa tattcccagc gtaaagttac ttttgccgtt ttagttcgaa gccagtagta
     3361 actcgccaca agtactacca aaaccaaagg aatagaaatg taaggtgcgg cgactaacgc
     3421 aatataaatt aaaatagcat taaggataac acgaataaac atccacgttg tatccgcctc
     3481 ttctaatttc atactttccc aaccaaaata aatgttccac acttttagca tactgaggac
     3541 aataaacaaa gtgaaaaact ggctgtacgg aacctttgtc acttccacat acatcggcat
     3601 acaaacccca agcacaatta caaaaacata taattgcata aagaagctcg ctatttttgc
     3661 ttgggtaaaa taactatcca ttgctttttc ctgtacaatt aagtaaacaa tatccggttt
     3721 tttcagcaac gtggcaacag gactaatggc aattgaagca gtgagtaaaa taaccattaa
     3781 cggaataacg ggaaatgtgg gttcaagcgt cttcacccaa ccagcgtaat aaaaaatccc
     3841 cgctccaagt ccaatcacaa gcacaaaaag caaatgatca ttaaacatat aacgaagata
     3901 gcgcatgact tcggtcgtat aggcactaaa acgttctttc caaagcgctt tgctgtcaaa
     3961 tatcatcttc atcagcttcc tcttcctttg tcaactgaat gtaaatttca tcaagtgaag
     4021 ctcccggcat ttcgaagttt gtttgcaagt ctttcagcgt tccctctgcg cgaatctcgc
     4081 cttgatgaat aataatgaac gtatcgcaat atttctcagc cgttgcaagt atatgcgttg
     4141 acattaaaat gcttgcacct ttactacgca tttcgtccat ccagttaagt aatgactgaa
     4201 taccaagcgg atctaaacca acaaaaggct catcaatgat atataattta ggttcaatta
     4261 ggaaagccga cataatcatt actttttgtt tcatcccttt agaaaaatgg gctggaaacc
     4321 aattaagttt tttctctaaa cgaaactcct ttaaaagagg cttcattctt gcttgcagtt
     4381 cttcttctga tataccataa gccatacctg ttaattctaa atgttctttt aaggttaatt
     4441 cttcatataa tacaggtgtt tcagggatat aagagaattg ctttctatat gtttctgtat
     4501 cttccactaa ttggtgatta ttgattttaa tcgttccttg tttaggatgc attagaccag
     4561 ttatatgctt aatggtcgta cttttccctg ccccgtttag cccaattaag ccaacaattt
     4621 gtttttcttc aatcgcaaac gaaatatctt ttaagactgg acgtttggta tacccgcccg
     4681 tcaggtgttc aacttctact aaagccattt ccatacctcc ttacgtaatc tttagttaat
     4741 aatagcatat tcgtcccttg aactgtcaaa ataatccacc atctactatc taacacatgc
     4801 ttttcactgc tttttatgtt aaattaaaat agtacataat tatatgtaat gaaaggtggt
     4861 catacttaat ggacgattgc attttctgca aaatagttcg tggcgaaatt ccttctgcca
     4921 aagtgtatga agatgatgaa gtatatgctt tcctcgattt aggccaagtt acagaaggtc
     4981 atacactcgt aattcccaaa aaacatgcta ggaacacatt cgatttaccc gatgaaacgg
     5041 ccgctgaatt attccgccgc gtaccaaaaa tcgcgcgggc attaaaagaa gctttaccga
     5101 ttcaaggatt aaatatttta aataataatg aagaagttgc tttccaatct gtttttcatt
     5161 gtcatatcca tttaatacca aggtatagca aatcagacga ctttgggtta aaatggaaag
     5221 ataacgcaga ctggtataca caagaacgtt accaagaaat tgctgaactt attgcagcaa
     5281 aagtagacta aaatgacttt atggatggag tggagtataa atgaataaaa aatcacttat
     5341 tttcggtatt ttagctggtg gggcaattgg agccgcagcc tcggtattat ttgctccaaa
     5401 atccggcaat gagcttcgaa aagatattgt cgctaaatca ggtgaagcaa gtgttatttt
     5461 gaaagaactc gcatataatg caaatgaact tatccaatcc gttcaagttc tcggcacaga
     5521 aggttccact ttattaaaag atgtttcttc tgacatcatg gaatctgttt ccaaatggaa
     5581 tgaagaaatg gaacctgaga agaaacgcct aaaagacgag attaaagata tgcaaaaaac
     5641 aatttccgac ttagaaaaaa cgctaaaaaa agataataaa taagtagaga aactgggcga
     5701 ctgctcagtt tttttatttg tctaaagtcc ctttcaaaaa aacgtcataa ttagacaata
     5761 aattctctaa aaaaagcttg aattttgtag catttgagca tacaatacta tggtgccttc
     5821 tgatggaaga gcactatttt agctataact ggaggaaagc ttacaatgcg ctgcctaaaa
     5881 tcaatcaaca cagagcgacg agacgaattt aatcgacttt tcctaaaagg aattcttgtc
     5941 tggctagctg ccgtatgtat ttgtttttta acacaacatt taatctatcc tgatcaactt
     6001 acaaatgatt atcaacttgc tagcttttta ggtattattt taatttaccc aattcataaa
     6061 ttacttcata ttcttggatg ctttaaatac cgtgaaggaa ctgttattca gtggcgtatt
     6121 cacttctt
//
LOCUS       DASDYK010000132         6028 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.132, whole genome shotgun sequence.
ACCESSION   DASDYK010000132 DASDYK010000000
VERSION     DASDYK010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6028)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6028)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6028
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.132"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            100..861
                     /locus_tag="U0308_002570"
     CDS             100..861
                     /locus_tag="U0308_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM2317525.1"
                     /translation="MNQKERIVEELKLLENKKTISQEELMQIFSISKDTARRDILKLV
                     ESGLAERYPGGVSLPVLKPQIESYTSRLVKQSEQKKKIAYAAGKVIKDHMTIYLDVST
                     TVHFLASNLEQHDLVVVTNSMDNAIAASQKEANKVYLLGGFFNFHSRVLSGEPVLGQL
                     QQFNFDVAFIGGAGLTEDGIFYSELTDVYMKQEIIRNSEKVFLLIDSTKVNKKTASKI
                     DFSGIDAVITDQPLPKDLMQCLISKEVEVISLKGL"
     gene            867..2000
                     /gene="nagA"
                     /locus_tag="U0308_002571"
     CDS             867..2000
                     /gene="nagA"
                     /locus_tag="U0308_002571"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HEM2317526.1"
                     /translation="MAVIKNVKIYKENELIDAAVITEGNLIKEVCSTTPEKYSDEPTF
                     DGNGQLLIPGMIDVHIHGANNYDMMDGSTESIQAVSMACAETGCTSFLVTSVSSSFED
                     LIQMIKQTKKVIGKEKGAKIAGIHLEGPYLNIEKKGMQNPAYLRHPDLKEMKKIFDEA
                     DGLIKMVTIAPELPRGIELIDFLKKRGVVVAIAHSNATYEEAQNAFEQGATHITHCFN
                     AMPAIHHRAPGLVTAALENDSVSVQTIVDGVHLHPGIVRLIHKIKGPDKMVLTTDALQ
                     AMGVGDGEYIFGGHQVTVKEGIARLKDGTLASSTVTMNKSLKLSNEFGIHLQDAIQMA
                     ASTPADILGMNNFGRIEKGYVADLVLLDKNFEVLTTWIDGEIY"
     gene            2042..2851
                     /locus_tag="U0308_002572"
     CDS             2042..2851
                     /locus_tag="U0308_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2317527.1"
                     /translation="MPLFKHEGTYFNYEIQGEGIPFLFLHGLGDNLKFAYETFDKDEK
                     IQLISLDQRGHGKSGNDSRKLSYDRLAKDALALMDYLGIQHFFVGGLSMGAGVAVNLA
                     VQAADKVLGLIILRSSATDEPMKKEVIAWFSTVSKYLPKKDGALLLEQDPIFPSIKET
                     YPKAIDTFKRYFEDDAAVTHYKKFSDIPKDRPIKNKSELTNLTIPTLILANNYDVIHP
                     IEYSLFYKRNIENASYYELTPKTIDAEKHKLEITTYINTFIINTSKKTNYK"
     gene            complement(2957..3913)
                     /gene="manA"
                     /locus_tag="U0308_002573"
     CDS             complement(2957..3913)
                     /gene="manA"
                     /locus_tag="U0308_002573"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase, class I"
                     /protein_id="HEM2317528.1"
                     /translation="MTEALFLNPVFQDRIWGGTKLHDYFGYDIPSDTTGEDWAISAHP
                     NGPSVIKNGEYKGKTLAELWQENPALFGNPKEAVFPLLTKILDANTDLSVQVHPNDEY
                     AKVHENGELGKTECWYIIDCAPGAELIYGHKAASKEEFATWAKNGEWDKLLRKVAIKP
                     GEFYYVPSGTIHALGTGTLVLETQQSSDTTYRVYDYDRKDAEGNLRELHLDKAIDVTT
                     APHVDAKLDIKTETRGGLTETTFVSNDFFSVYKWEVDGAAEFMAKAPYTLVSVLDGEA
                     VLTIDGTKQSIKKGDHFVLPNDVKSWEIDGKMTAIVSNPPVK"
     gene            complement(3993..4724)
                     /locus_tag="U0308_002574"
     CDS             complement(3993..4724)
                     /locus_tag="U0308_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent oxidoreductase"
                     /protein_id="HEM2317529.1"
                     /translation="MNDVLTLLRNHRSFRKYKKGVEIPEGNLDAIIRAAQAAPSWING
                     QHYSIIAIKDQERKNKMAELCGNQPYIAECSVFLCFVADFHRVKVASDMHGKSFQIAG
                     EEDLLMVAATDIGLCMQNALTAAESLDYGTICIGGLRRNITATAEFLNLPEFVMPVVG
                     LCIGVPDVEAPVKPRLPKEAVYFEETYQTDVMPLLEAYDQEIIPFSEREGFVSYTERL
                     AKFYDRPYYPNLTEQIKERGFLGGK"
     gene            4876..5106
                     /locus_tag="U0308_002575"
     CDS             4876..5106
                     /locus_tag="U0308_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2317530.1"
                     /translation="MRQQQIDFKWLEENFLTANEAATYLGISKQALLSLAKRDVLPFT
                     KKGNMVLFHRMDIELRLENQQSLREKYRPFET"
     gene            5190..5945
                     /locus_tag="U0308_002576"
     CDS             5190..5945
                     /locus_tag="U0308_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-dependent peroxidase"
                     /protein_id="HEM2317531.1"
                     /translation="MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQELMLNELSHFL
                     SDMEITKNIGEGEHTIYSILGQKADLVFFTLRDSLEALNEVENRFNKLAIADYLLPTY
                     SYISVVELSNYLASHMAGGEDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWY
                     MLPMEERQQLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTE
                     MRFDEASARYAEFGSFFIGNLLPSEQLSKLFTI"
BASE COUNT         1961 a         1124 c         1135 g         1808 t
ORIGIN      
        1 caggttgaca taaacttgaa aaggtatata attaacttat aaaaacttat ttatataaaa
       61 aaataaactt aagataaatt atctaaggtg gcgaaaatga tgaaccaaaa agaacgaata
      121 gtggaggaac tgaagctgct agagaacaag aaaactatct ctcaggaaga actcatgcag
      181 attttttcca tttcaaaaga tacagcaagg cgcgatattt taaaattagt cgaaagcgga
      241 ctcgcagaac gctatccagg tggcgtgtca ctaccagttt taaaacctca aatagaaagc
      301 tatacaagta gattagtaaa acaaagtgaa cagaaaaaga aaattgctta tgcagcaggt
      361 aaagtgataa aagatcatat gacaatctat ttagatgttt cgaccactgt tcattttttg
      421 gcttcaaacc ttgagcaaca tgatttagta gtagtaacga attcgatgga taatgccata
      481 gctgcatctc agaaagaagc gaacaaagta tatttgctcg gtggtttttt caacttccat
      541 tcgcgtgtat tatccggtga gcccgtttta ggtcaacttc agcaatttaa cttcgatgtt
      601 gcttttattg gcggggctgg actaacggaa gatggcatct tttattcaga acttacagat
      661 gtttacatga aacaagagat tatcaggaat tccgaaaaag tatttttact aattgatagt
      721 acaaaagtaa ataaaaagac agcttccaaa attgattttt ctggaattga tgccgtaata
      781 acagatcagc ctttaccaaa agatttaatg cagtgcctta tttctaaaga agtagaagtt
      841 atatctttga aaggattgtg aaaataatgg ccgttatcaa aaatgtgaaa atttacaaag
      901 aaaatgaatt aattgatgca gcagttatta cagaaggaaa tttgataaaa gaagtttgct
      961 caactactcc tgaaaagtat tcagatgagc caacttttga tggaaatgga cagttgctaa
     1021 ttcccggaat gatcgacgtt catattcatg gggcaaataa ttatgatatg atggatggct
     1081 caacagaaag catccaagct gtttcgatgg cttgtgcgga aaccggatgt actagtttct
     1141 tagtcacctc ggttagttct tcttttgaag acttgatcca aatgattaag caaactaaaa
     1201 aagtcattgg aaaagagaaa ggtgccaaaa ttgcaggaat tcatttagaa ggcccctacc
     1261 ttaatataga aaaaaaagga atgcaaaatc cagcctattt aagacacccc gatttaaaag
     1321 aaatgaaaaa gatcttcgat gaagcagatg gtctgataaa aatggtcaca attgctccag
     1381 aattgcctag gggtatcgaa ctcattgact tcttgaaaaa aagaggagtt gtggtcgcca
     1441 ttgcacattc caatgcaact tatgaagagg cgcaaaatgc tttcgaacaa ggagcaaccc
     1501 acatcacaca ttgcttcaat gctatgccag ccattcatca ccgggcacca ggacttgtta
     1561 cagcagcctt ggaaaatgat tcggtaagcg ttcaaaccat tgtagacggt gtccatctcc
     1621 atcccggaat cgtgcgcctt attcacaaaa ttaaaggacc agataaaatg gttctcacaa
     1681 ccgatgccct tcaagcaatg ggagttggcg acggggagta tatttttggc ggtcaccaag
     1741 taacggttaa ggaaggcata gctcgtttaa aagacgggac attagcttca agtaccgtga
     1801 cgatgaataa atccttaaag ttaagtaatg aatttgggat tcacttacaa gacgctattc
     1861 aaatggcagc aagtacgccg gcagacattt taggaatgaa caattttggt cgaatcgaaa
     1921 aaggctatgt cgctgattta gttttacttg ataaaaattt tgaagttcta actacatgga
     1981 ttgatggtga aatatattaa atcgactgga taaatacttt cagaggagtg gattataaaa
     2041 tatgccatta tttaaacacg agggaactta ctttaactat gaaatccaag gtgaaggcat
     2101 accattttta tttcttcatg gattaggtga taatttaaaa tttgcttatg aaacatttga
     2161 taaagacgag aaaatccaat taatttcatt ggatcaaaga ggccatggaa aaagcggaaa
     2221 cgattccaga aaacttagct acgacaggtt ggccaaggac gcattagcgt taatggatta
     2281 tttaggaata cagcattttt ttgtcggagg attatctatg ggggctggcg ttgccgtgaa
     2341 tttggccgtc caagcagccg ataaagtgct gggccttata atacttagga gttctgcaac
     2401 agatgaaccg atgaaaaaag aagtgatagc atggtttagt accgtaagta agtatttgcc
     2461 taaaaaagat ggtgccctat tattggagca agatccgatt tttccatcga taaaagagac
     2521 ctatcctaaa gcaattgata cgtttaagcg ctattttgaa gatgacgccg ctgttaccca
     2581 ctataaaaag tttagcgaca tacctaaaga tagaccaata aaaaacaaaa gtgagttgac
     2641 taatttaaca atccctactc ttatactcgc aaataactat gatgtaattc atccaatcga
     2701 atacagtttg ttttataaac gtaatattga aaatgcaagt tattatgaac taacacctaa
     2761 aaccattgat gcagaaaaac ataaactgga aataacgact tatataaata catttatcat
     2821 taatacatca aaaaaaacaa attataagta atccaaaatg atattttagt tgtcatttca
     2881 taaagcaata aagaagcaga aatcttgtat attccatttt caaaatggct tttatacaat
     2941 gatttctgct tatttgttat ttcacaggcg gattcgaaac aatcgccgtc atttttccat
     3001 caatttccca agattttaca tcattcggca atacaaaatg atcgcctttt ttaatcgatt
     3061 gttttgttcc atcaatcgta agtaccgctt ctccgtctaa aacactcact aacgtataag
     3121 gagctttagc catgaattca gccgcgccgt ccacttccca tttgtatacg ctaaagaaat
     3181 cattcgatac aaaagtagtt tcagtcaacc caccacgtgt ttctgtttta atatctaact
     3241 tcgcatccac atgcggtgca gtcgtaacgt caatagcttt atccaaatga agttcgcgca
     3301 agtttccttc tgcgtcttta cggtcatagt catatacacg ataagtagta tcagagcttt
     3361 gttgtgtttc aagcactaac gtccccgtgc ctaacgcatg aattgtacca cttggaacat
     3421 aataaaattc acctggttta atcgccactt tacgaagcaa tttatcccat tcgccgtttt
     3481 ttgcccaagt agcgaattct tctttgctag ctgctttgtg tccatatatt aattccgcac
     3541 caggagcgca gtcaataata taccagcatt ctgttttgcc aagttccccg ttttcatgca
     3601 ctttcgcata ttcgtcattt ggatgaactt gtacagaaag gtccgtattc gcatccagaa
     3661 ttttcgttaa tagtgggaaa acggcttctt tcggattacc aaaaagtgca ggattttctt
     3721 gccataattc agctaatgtt ttgcctttat attcgccgtt tttgattacc gaaggaccgt
     3781 tcggatgagc ggaaatcgcc cagtcttctc cagtagtatc agacgggata tcgtaaccaa
     3841 aataatcatg taatttcgtt ccaccccaaa ttcggtcttg aaaaacaggg tttaaaaata
     3901 atgcttctgt cattataaaa ttacctccat tccagcgttt ttgctgggtt ttgtcaatta
     3961 aaagtatata ctaataatgg cgaagatgct agttatttcc cgcctaaaaa gcctctttct
     4021 tttatttgtt ctgttaaatt tggataataa ggtctgtcat aaaatttggc taaccgttcg
     4081 gtataagaaa caaagccttc tcgctctgaa aacggaataa tctcttggtc atatgcttct
     4141 agtaaaggca tgacatctgt ttggtacgtc tcttcaaaat aaactgcttc ttttggcaaa
     4201 cgtggtttta caggtgcttc gacatccgga acgccaatac aaagtcccac aacgggcatg
     4261 acgaattctg gtaaatttag aaattcagcg gttgccgtaa tatttctgcg caaaccacca
     4321 atacaaatcg tcccgtaatc aagcgactca gcagctgtta aagcattttg catacaaagt
     4381 ccgatgtctg ttgccgcaac cattagtaaa tcttcttccc cggcaatttg gaaacttttg
     4441 ccgtgcatgt cactcgctac ttttacgcgg tgaaaatctg ccacaaaaca aagaaaaacg
     4501 gaacattctg ctatgtaagg ttgatttccg caaagttcgg ccattttatt tttacgttct
     4561 tgatctttaa tcgcaataat cgaatagtgt tgaccattaa tccacgacgg ggctgcttga
     4621 gctgctcgga taatcgcatc tagatttcct tccggaatct caaccccttt tttatattta
     4681 cgaaaagagc gatgatttct tagcaaagtt aatacgtcat tcatatttat gcctcctaga
     4741 tttatcattt agttaaagta tagcttgttt ttaggcaatt gttaatgtat agcttgtttt
     4801 taggcaattg ttaatgtttt ctcttgtatt tctgccagat attttctaca cttaaagaaa
     4861 aagaggtgaa aagatgtgcg ccaacaacaa atagatttta aatggcttga agaaaacttc
     4921 ctgactgcga atgaagccgc gacttactta ggcatatcta agcaagcact cctttcctta
     4981 gccaaacgcg atgtactccc ctttacgaaa aaaggaaata tggttctttt ccaccgaatg
     5041 gacattgaac ttcggcttga aaaccaacaa agcttacgtg aaaaataccg tccttttgaa
     5101 acgtaaattt cacaaacagc gaaacggacg aactacttcc cgtatgttac actttagtta
     5161 gtgatattct aaacaaggag tgatacataa tgaatgaagc agtaaaaact ttagatggat
     5221 ggttttgtct acatgatttt cgttcgattg actgggctgc gtggcgtgaa ctaaatccag
     5281 gtaatcagga acttatgtta aatgaactca gccacttttt aagcgatatg gaaattacta
     5341 aaaatatcgg tgaaggtgaa cataccattt acagtattct tggtcaaaaa gcagatttag
     5401 tattcttcac tttgcgtgat tcccttgaag cgctgaatga agtcgaaaat cgttttaata
     5461 aattagcgat tgccgactac ttgttgccga cttattccta tatatctgtg gtggaattaa
     5521 gtaactatct agcgtctcac atggcgggcg gcgaagatcc ttaccaaaac aaaggtgttc
     5581 gcgcgagact ctatccagca ctcccaccta aaaagcatat ttgtttctac ccaatgagta
     5641 aaaaacggga cggcgctgat aattggtata tgcttccaat ggaagaacgc caacaactta
     5701 ttcgcgacca tggcttgatt ggtagaagct atgcgggcaa agtacaacaa atcattggtg
     5761 gctccattgg atttgatgat tatgaatggg gcgtcacttt attttccgat gatgcactgg
     5821 agttcaaacg catcgtaacg gaaatgcgct ttgatgaagc aagcgctcga tatgctgaat
     5881 ttggttcttt ctttattgga aacctgttac catccgagca actttctaaa ttatttacta
     5941 tttaatataa gtaaaaactg gaattcaatc taacaaatga ctgattttgt tagctggatt
     6001 ccagtttttt tatttcacta aactaaca
//
LOCUS       DASDYK010000133         5987 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.133, whole genome shotgun sequence.
ACCESSION   DASDYK010000133 DASDYK010000000
VERSION     DASDYK010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5987
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.133"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            208..1488
                     /gene="ftsA"
                     /locus_tag="U0308_002577"
     CDS             208..1488
                     /gene="ftsA"
                     /locus_tag="U0308_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEM2317532.1"
                     /translation="MGDSEIYVSLDIGTASVKVIIAEMADDRLNIIGVGNVESSGIKK
                     GIIIDIDKTVESIKKAIEQAERMVGVEISQVIVGVVSSQVHLEACRGIVAVGSENREI
                     TDEDVWNVMDAAQVVPLSPEREIINTIPDQFVVDGLTGITDPRGMIGVRLEMEGTLIT
                     GSKTILHNTLRCVERAGLEISDIALQPLAEASISLSEDDKEFGTALVNVGAGTTTVSV
                     FEQGRLTYTGVIPVGGDNITKDLSLGLNTSTANADRVKLDHGYAFYDDASPDEVFAID
                     VIGSDQKQHFTQVEVADIIEARMEEIFQLVVEELTRVGKTHLPGGYVLTGGSMAIPGA
                     IDLAGKTLAAHVRLAIPDYIGVREPSFTTAVGLIKYAYQMAELEGRDVSSSASEPRYD
                     DEAPKQKQPKPKQKKSDDEKVSTKMKNFFGAFFE"
     gene            1555..2730
                     /gene="ftsZ"
                     /locus_tag="U0308_002578"
     CDS             1555..2730
                     /gene="ftsZ"
                     /locus_tag="U0308_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEM2317533.1"
                     /translation="MLEFDTSSESLATIKVIGVGGGGNNAVNRMIEHGVQGVEFISVN
                     TDAQALNLAKAETKLQIGTKLTRGLGAGAVPEIGKKAAEESREQIEEALKGSDMVFVT
                     AGMGGGTGTGAAPVIAQIAKEMGALTVGVVTRPFGFEGPKRTKQALTGTEAMKEAVDT
                     LIVIPNDRLLQIVDKNTPMLEAFREADNVLRQGVQGISDLIAVPGLINLDFADVKTIM
                     TNRGSALMGIGIATGENRAAEAAKKAISSPLLETSVDGAKGVLMNITGGSNLSLYEVQ
                     EAAEIVSSASDEDVNMIFGSVINDELKDELIVTVIATGFDEEKQAQQQAQANRRPNQS
                     IQVNRPNYAVQDEQQNDYAQNAPQQANAPVHEQQAEPQQNSSDVDVPAFIRNRNRRG"
     gene            2849..3538
                     /locus_tag="U0308_002579"
     CDS             2849..3538
                     /locus_tag="U0308_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEM2317534.1"
                     /translation="MTKQANLQKVTAQIERACEESNRQPEDVTLVAVTKTIDVAGITE
                     LYDLGIRHFGENRADVFQEKTVALADKEDICWHYIGSLQTRKVKDVLPKIDYLHSLDR
                     SSLAKEIEKRATKPVKCFLQVNISGEESKHGFSKEEALSFLQEANFTFIEIVGLMTMA
                     PITNSDIELHHVFHELKQLQQEIHALQLNNIPCTELSMGMTNDYGVAITEGATFIRVG
                     RALVSDDNMEV"
     gene            3542..4000
                     /locus_tag="U0308_002580"
     CDS             3542..4000
                     /locus_tag="U0308_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HEM2317535.1"
                     /translation="MGLSNKFKSFFFLDEEEEYYEEEVAREPEPMQKKTKKEKPNKNR
                     FYAVEEDDAKVVSMQGAQFSSRMVLAEPRVYAEAQELADYLKEYKSVVVNLQRISHDQ
                     ATRIVDFLSGTVYALGGDIQRVGNNIFLCTPDNVEVDGSISEMLDEQNFM"
     gene            4023..4313
                     /locus_tag="U0308_002581"
     CDS             4023..4313
                     /locus_tag="U0308_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEM2317536.1"
                     /translation="MQSILYQVVEIILFIIRWLPTLMFIYFLMSWFPGARESKIGQFL
                     ARIFEPILEPFRRIIPPIGMFDISSLVAYFIFQYAMRVLTGLIQVYVIPMLF"
     gene            4438..5214
                     /locus_tag="U0308_002582"
     CDS             4438..5214
                     /locus_tag="U0308_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEM2317537.1"
                     /translation="MDGIYQHFRAEEYAFIDKILGITMQVENEYTPQLTDFLDPRQRF
                     ITETVIGGYDEINVQFFGGVAHAERRRALIYPDYYTPTEADFEIALFHIRYPVKFTTL
                     THQKILGTLMSLGMKRDIFGDILNNGTEWQLLVESTMKDYLTLQLEKIGKVNVMLEET
                     DLANAVYAPVVWEEMGLTVSSMRLDVIISNAHHISRQKAKQLVTAGLVKVNWKTVENP
                     DFECEEEDVLSARGYGRVKVLSTGGRTKKDKIRIEIGYLK"
BASE COUNT         2007 a          971 c         1282 g         1727 t
ORIGIN      
        1 tgtgctttta ttaccttctt tcttagtgta gactgtaaat aagtgatttt gtatgttagg
       61 cagaatgggc aatcattcta cactgacgcc ataaaaataa agaaatttca tagcttttca
      121 agaaagttaa aaaaccggct tttgctcggt ataaaaaaat gaaataaata catgttaaat
      181 gactagaata aaaggaggtg ccgataaatg ggtgatagcg aaatttatgt aagtttagac
      241 attggaacag cttctgtgaa agtaatcatc gcagaaatgg ctgacgatag actcaatatt
      301 atcggtgttg ggaatgtcga atcttccggg attaaaaaag gaattattat cgacatagac
      361 aagactgtag aatccattaa aaaggcaatt gaacaagcag aaagaatggt tggcgttgaa
      421 atttctcaag taatagttgg ggtagtatcg agtcaagtgc atttagaagc ttgccgagga
      481 attgtggcag taggtagcga aaatcgtgaa attacagatg aagatgtctg gaatgtaatg
      541 gatgccgctc aagttgttcc tctatctcct gaaagagaaa ttattaacac tattccagat
      601 caatttgttg tagatggatt aactgggatt acagatccac gtggaatgat tggtgttcgt
      661 ctagaaatgg aaggcacatt aatcactggt tcaaaaacaa ttttacataa tacattacgt
      721 tgtgtggaac gtgcaggcct tgaaatttct gatattgctt tacaaccact tgcagaggca
      781 tccatttcct tatcagaaga tgataaagaa tttggaacag cactcgtgaa tgttggagca
      841 ggaactacaa ccgttagcgt gtttgaacaa ggacgactaa cttatactgg tgtcattcca
      901 gttggtggag ataatatcac gaaagactta tcacttggac taaacacttc tactgcaaat
      961 gccgatcgcg ttaaattgga tcatggctat gcattttatg atgatgcttc tccagatgaa
     1021 gtttttgcta ttgatgttat cggtagtgac caaaaacaac attttacaca agtagaagta
     1081 gcagatatta tcgaagcgcg tatggaagaa attttccaat tagtagtgga agaacttact
     1141 cgtgtcggta aaacgcatct tccaggaggt tatgtactaa ctggtggttc gatggctatt
     1201 ccaggagcaa ttgatttggc tggaaaaacc ttagcagcgc atgttagact agcgattcct
     1261 gattatattg gtgttcggga accttccttt acaaccgcag taggcttaat taaatatgct
     1321 tatcaaatgg ctgaattaga aggacgcgac gtaagcagtt cggcaagcga acctcgttac
     1381 gacgatgaag caccaaaaca aaagcaacct aaaccaaaac aaaagaaatc agatgacgaa
     1441 aaagtatcaa cgaaaatgaa gaattttttc ggcgcatttt ttgaataaaa gcgaatagct
     1501 gatagtccag caagaaaatc gtatcgtata aatcggcaaa taggaggcaa taatatgtta
     1561 gaatttgaca ctagttcaga aagtttggca acaattaaag taatcggtgt tggcggtggc
     1621 ggtaacaacg ctgtaaaccg tatgattgag catggtgttc aaggagtaga atttatctcc
     1681 gttaatacag acgctcaagc acttaactta gcaaaagcag aaacaaaatt acaaatcggt
     1741 acaaaattaa cacgtggttt aggcgcggga gctgtacctg aaattggtaa aaaagctgca
     1801 gaagaaagcc gcgaacaaat tgaagaagct ttaaaaggct ctgatatggt attcgtaact
     1861 gctggaatgg gcggtggaac tggaactggt gctgcacctg ttatcgctca aatcgcaaaa
     1921 gaaatgggcg ccctaactgt aggtgttgtt actcgaccat ttggttttga aggaccaaaa
     1981 cgtacgaaac aagccttaac tggaacagaa gcaatgaaag aagcggtaga tactttaatt
     2041 gttattccta acgaccgtct acttcaaatt gtggataaaa acacgccaat gcttgaagct
     2101 ttccgtgaag cagataatgt tttacgtcaa ggtgtacaag gtatttctga tttgattgcc
     2161 gttccaggtt taattaactt agactttgcc gatgtgaaaa caattatgac taatcgtggt
     2221 tctgccctta tgggaatcgg tattgcaact ggtgaaaacc gtgctgctga agctgcgaaa
     2281 aaagcaattt cttctccact tcttgaaact tccgttgacg gagcaaaagg tgtcctaatg
     2341 aatattacag gtggatctaa cctaagtctt tatgaagtac aagaagcagc agaaatcgta
     2401 tcaagtgcat cagatgaaga tgtaaacatg attttcggtt ctgttattaa cgacgaatta
     2461 aaagatgaac tgattgtaac tgttattgca acaggttttg atgaagaaaa gcaagcgcaa
     2521 caacaagcgc aagcaaatcg ccgtccaaat caatctatcc aagtaaatcg tcctaattat
     2581 gctgtacaag acgaacaaca aaatgattac gcgcaaaatg cgccacagca agcaaatgca
     2641 ccagttcatg aacaacaagc tgaaccacaa caaaatagtt cagatgttga tgtaccagca
     2701 tttatccgta accgtaaccg tcgcggataa tacttataac ataatttcac ccggccactt
     2761 ttgaagcatt gccaagtgac cgggtatctg attataacaa gaagcgtttt aaataaagca
     2821 cttcgggaat tatataaggt gataaaaaat gacaaaacaa gctaatttac aaaaagtaac
     2881 ggcacaaata gagcgtgcct gtgaagaaag taatcgtcag ccggaagatg taacgttagt
     2941 agctgttaca aaaacgattg atgtagctgg aatcacagag ctttatgatt taggtatccg
     3001 tcactttggt gaaaatcgtg cagacgtttt ccaagaaaaa acagtagcac ttgcagataa
     3061 agaagacatt tgttggcatt acattggttc tttacaaaca cgtaaagtaa aagatgtttt
     3121 accaaaaatc gattatttgc attcgcttga ccgatcatcg ctagcaaagg aaatcgaaaa
     3181 gcgagctact aaaccagtga aatgtttcct tcaagtgaat atttctggtg aggaaagcaa
     3241 acatggattt tccaaagaag aggcgctatc ttttttacaa gaagcgaatt ttacgttcat
     3301 tgagattgtt ggtttaatga caatggcacc tattacaaat agcgacatag agctgcatca
     3361 cgtatttcat gagttaaagc aattgcagca agaaattcac gcgcttcagt taaacaatat
     3421 tccatgtaca gagttatcta tggggatgac gaatgattat ggagttgcaa ttacggaagg
     3481 tgcaacattt atacgagtag gaagagcttt ggtgagtgac gataatatgg aggtgtaaca
     3541 aatgggacta tcgaataaat ttaagtcatt ctttttctta gatgaagaag aggaatatta
     3601 tgaagaggaa gtagcgaggg aaccagaacc tatgcaaaag aaaacgaaga aagaaaaacc
     3661 aaataaaaat cgtttttatg ctgtagaaga agatgatgcg aaggtggtta gtatgcaggg
     3721 agctcagttt tctagtcgta tggtacttgc tgaaccgcgt gtgtatgcag aggcacaaga
     3781 acttgcggat tatttgaaag aatataaatc tgttgttgta aacttgcaac gtattagcca
     3841 tgatcaagcg acacgtattg tcgatttctt gagtggaaca gtatatgcat taggtggaga
     3901 tattcaacgc gttggcaata atattttctt atgtactcca gacaatgtgg aagtggatgg
     3961 ctctatttcc gaaatgctcg atgaacaaaa ctttatgtga tgaagtagag gtgtgagcta
     4021 gattgcaaag tattttatat caagtggtgg aaatcatttt gtttattatc agatggttgc
     4081 caacactcat gtttatttat ttcttgatga gctggtttcc cggtgcaaga gaatcaaaaa
     4141 tcggccaatt tttagctcgt atttttgaac cgattttaga gccttttaga aggattattc
     4201 cgccgattgg tatgtttgat atttcgtccc ttgtggctta tttcattttc caatacgcga
     4261 tgagagtttt aaccggttta attcaagtgt atgtcattcc aatgctattt taaaaagcgc
     4321 gcccgttttc aaaatgggtg gcttttttta ttaataagca agattagcct agtagcagct
     4381 gttttcatgg tataataggg ctaaagactc ggaacggatt gaaagggaga aattaggatg
     4441 gatggaattt atcagcattt tcgcgcggaa gaatacgcat ttattgataa gattttaggg
     4501 attacgatgc aagttgagaa tgaatacacg ccacaactta cggatttctt ggatccgagg
     4561 cagcgtttta ttaccgaaac agttatcggt ggttatgatg agatcaatgt acaatttttt
     4621 ggtggagtgg cgcacgcaga acgacggcgc gcactgattt atccagatta ttatacgccg
     4681 acagaagcgg attttgagat tgctttgttc catatacgct acccggtaaa attcacgacc
     4741 ctcacacatc aaaaaatcct tggaacactg atgtcgcttg gaatgaagcg tgatattttt
     4801 ggagatattt taaataatgg cactgaatgg cagttattag tagaaagtac aatgaaggat
     4861 tatttaacat tacaactaga aaaaatcggg aaagtaaatg tgatgttaga ggaaacggat
     4921 ttagctaatg ctgtttatgc cccggtcgtt tgggaagaaa tgggcttaac tgtttctagt
     4981 atgcgacttg acgtgattat tagtaatgca catcatattt ctagacagaa ggcgaaacaa
     5041 ttggttactg cgggactagt aaaagtcaac tggaaaacag tggaaaaccc ggattttgaa
     5101 tgtgaagaag aagatgtatt gtctgctcgc ggatatggtc gggtaaaagt actatcaact
     5161 ggcggcagaa cgaaaaaaga taaaattagg attgaaattg gctatttaaa ataaaaacga
     5221 aagcagttgc tgctttcgtt tcagatatag taatgagtag tacctaatgt catatgttgt
     5281 caaatggtct tatgttatta ttaaatatga aaagagagtc atgcgctaag atgactctca
     5341 agtataagcc catttaaggt ggcagctagc ttaatagatt ataaaaataa ccactaaacc
     5401 gaccaaagtt tatgagtggt tattttttgt tattttgact gttcaatagc aacaccaggg
     5461 ttgcaaaaga cagtgcttca taaacagtca tgggttatcc tttccaggca atcctaacaa
     5521 aaatattcat agcatcaccc tttcttgttg aaagagctag ccaccaccat aaacttgctt
     5581 actctttttg tatagcattg aaactctttt ggaaaaaggg taaatgctat ggttatgtac
     5641 taaaaatatt ttttatcgcg agtttctaca aaacaacgaa caataaagct aactataatg
     5701 atcaatatat agatgtgatc atttaaaata agccaattta ctccgtattc aatagctaaa
     5761 gacaataact ctctaaataa aaattctagg attgttttca tgaatcttcc cacctttcgt
     5821 ttaaatgtat atatagatgc agttcaatgc tcgatttgtc gcatttacca ggaacttttt
     5881 ttgatcacta atccgtatat gtaaatggaa caaatttata cttatatacc agtgggaacc
     5941 tttgtttgtc ccgcttttca gaaaattcaa tatacaaatt tgtgaaa
//
LOCUS       DASDYK010000134         5888 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.134, whole genome shotgun sequence.
ACCESSION   DASDYK010000134 DASDYK010000000
VERSION     DASDYK010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5888
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.134"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            914..3307
                     /gene="inlA"
                     /locus_tag="U0308_002583"
     CDS             914..3307
                     /gene="inlA"
                     /locus_tag="U0308_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 internalin InlA"
                     /protein_id="HEM2317538.1"
                     /translation="MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPI
                     NQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQ
                     INFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPL
                     KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK
                     VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLT
                     DLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP
                     ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGH
                     NQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSIPNTVKNVTGALIAPATISDG
                     GSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTVTQPLKAIFNAKFHVDGKE
                     TTKEVEAGNLLTEPAKPVKEGYTFIGWFDAQTGGTNWNFSTDKMPTNDIDLYAQFSIN
                     SYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPA
                     KNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTKAGYAFKGWYDEKTDG
                     KKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPTTNNGGNTTPPSANIPGSNTS
                     TGNSASTTSTMNAYDPYNSKEASLPTTGDSYNALYLLIGLLAVGTAVALTKKARASK"
     gene            3392..5284
                     /locus_tag="U0308_002584"
     CDS             3392..5284
                     /locus_tag="U0308_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2317539.1"
                     /translation="MKEKYNPRRKYCLISGLAIIFSLWIIIGNGAKVQAETITVSTPI
                     KQIFPDDAFAETIKDNLKKKSVTDLVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTK
                     LFLNGNKLTDIKPLANLKNLGWLFLDENKIKDLSSIKDLKKLKSLSLEHNGISDINGL
                     VHLPQLESLYLGNNKLTDITILSRLTKLDTLSLEDNEISDIVPLSGLTKLQNLYLSKN
                     HISDLRALAGLKNLDVLELFSQECLNKSINHQTNLVVPNTVKNIDGSLVTPEIISDDG
                     DYEKPNVKWHLPEFINEVSFIFYQPVTVGKAKARFHGRVTQPLKEVYTVSYDVDGTVI
                     KTKVEAGTRITAPKPPTKQGYVFKGWYTEKNGGHEWNFSTDYMSGNDFTLYAMFKAET
                     TEKAVNLTRYVKYIRGNAGIYKLPREDNSLKQGTLASHRCKALTVDREARNGGELWYR
                     LKNIGWTKAENLSLDRYDKIEYDKGVTAYARVKNAPGNAVWTKPYNTAGATLVNKLSV
                     YQGKNMRILREAKTPITTWYQFSIDGKVIGWVDTRALNTFYKQSMEIPIQLTRYVSAN
                     KGNEAYYKVPVVDSPIKWGTLAKYKNQTLIVDRTATVEGQLWYRIRTSSTFIGWTKAA
                     NLRAQK"
     gene            complement(5399..5884)
                     /locus_tag="U0308_002585"
     CDS             complement(5399..5884)
                     /locus_tag="U0308_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM2317540.1"
                     /translation="MKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTN
                     PANIRKIMSNLKKSNLITTQTGKANPILARPPEEISLLDVYKSIEGNTNLIHVDPKTN
                     PDCIVGANIQQVLASKYDLLQQKIEFEMEKIKLDSIVRDISVLESKDRPQNMEIIEKY
                     L"
BASE COUNT         2135 a          970 c         1122 g         1661 t
ORIGIN      
        1 tcctatgtac tttttcagtt ggaatgtatg cttatctcgg ggtttatgtc ggattgttgg
       61 gctaagggtt ttgtgaaaaa gaggcggtaa gaactaataa tttaattaca tatccgatta
      121 ttgtagtggc ttaagacttt caaaaaaaga gagatgataa aaactatgag taatgtgctg
      181 gtgagaaaag accttcgttt gaaaatagaa gaatcagttc agctagaatt aaaacggctt
      241 ttaaagatta tgccaagtgg ttacggaagg aatatgattt tcctattcgt gatataaaaa
      301 ttaaactcga agaaatcaat tctcagttca gaaacaaaaa gaactatcaa ccagcaacgc
      361 atacaaagta aaaagataac acaatcacac cgtgttatct ttttttgtat acatttcacc
      421 aaaaatctcg acatccttat gtgttatttt gaacataaag ggtagaggat aacataagtt
      481 aattcttttt tggagaaaaa tagctattat tatttaatgg gctttgaaag gggtgattat
      541 atagaagaag tgaaaaaaag agagttttgg cgggaagagt gcggggcttg agttcgtcaa
      601 taatagacca ttttaaaagg tggaatgaca cgtgtggtat caacataaca tgatttgcat
      661 ggttgaattc ctattaagct tcgatagtga aatacataaa aatattatat atagggaaaa
      721 tgtgctggaa cgaacgagat gaaagatatc actaagcagc tccgtagaca gattaactac
      781 tgaataccat aggaacaatt catggggcgc atagtttaat aaagtaagca gacatgattt
      841 ttcggatgca ggagaaaatc ctatacaacg aaacctgata ttgtttctaa ctattgaaaa
      901 aggagtgtat atagtgagaa gaaaacgata tgtatggttg aaaagtatac tagtagcaat
      961 attagtattt ggcagtggag tatggattaa cacgagtaac gggacaaatg ctcaggcagc
     1021 tacaattaca caagatactc ctattaatca gatttttaca gatacagctc tagcggaaaa
     1081 aatgaagacg gtcttaggaa aaacgaatgt aacagacacg gtctcgcaaa cagatctaga
     1141 ccaagttacg acgcttcagg cggatagatt agggataaaa tctatcgatg gattggaata
     1201 cttgaacaat ttaacacaaa taaatttcag caataatcaa cttacggata taacgccact
     1261 taaagattta actaagttag ttgatatttt gatgaataat aatcaaatag cagatataac
     1321 tccgctagct aatttgacga atctaactgg tttgactttg ttcaacaatc agataacgga
     1381 tatagacccg cttaaaaacc taacaaattt aaatcggcta gaactatcta gtaacacgat
     1441 tagtgatatt agtgcgcttt caggtttaac tagtctacag caattatctt ttggtaatca
     1501 agtgacagat ttaaaaccat tagctaattt aacaacacta gaacgactag atatttcaag
     1561 taataaggtg tcggatatta gtgttctggc taaattaacc aatttagaaa gtcttatcgc
     1621 tactaacaac caaataagtg atataactcc acttgggatt ttaacaaatt tggacgaatt
     1681 atccttaaat ggtaaccagt taaaagatat aggcacattg gcgagtttaa caaaccttac
     1741 agatttagat ttagcaaata accaaattag taatctagca ccactgtcgg gtctaacaaa
     1801 actaactgag ttaaaactgg gagctaacca aataagtaac atcagtcccc tagctggtct
     1861 aaccgccctc actaacttag agctaaatga aaatcagtta gaagatatta gcccaatttc
     1921 taacttgaaa aatctcacat atttaacgtt gtactttaat aatataagtg atataagccc
     1981 agtttctagt ttaacaaagc ttcaaagatt atttttctat aataacaagg taagtgacgt
     2041 aagctcgctt gcgaatttaa ccaatattaa ttggctttcg gctgggcata accaaattag
     2101 cgatcttaca ccattggcta atttaacaag aattacccaa ttaggattga atgaccaaga
     2161 atggacaaat ccaccagtga actacaaagt aaatgtatcc attcccaaca cggtgaaaaa
     2221 tgtgacgggc gctttgattg caccagctac tattagcgat ggcggtagtt acgcagaacc
     2281 tgatataaca tggaacttac ctagttatac caatgaagta agttatacct ttaatcaatc
     2341 tgtcaccatt ggaaaaggaa cgacaacatt tagcggaaca gtgacgcagc cacttaaggc
     2401 aatttttaat gctaagtttc atgtggacgg caaagaaaca acaaaagaag tggaagctgg
     2461 gaatttattg actgaaccag ctaagcctgt aaaagaaggt tacacattta ttgggtggtt
     2521 tgatgcccaa accggcggaa ctaactggaa tttcagtacg gataaaatgc cgacaaatga
     2581 catcgattta tatgcgcaat ttagtattaa cagctacaca gcaaccttgg ataatgacgg
     2641 tgtaacaaca tctcaaacag tagattatca aggcttgcta caagaaccta cggcaccaac
     2701 aaaagaaggt tatactttta aaggctggta tgacgcaaaa actggcggtg acaagtggga
     2761 ttttgcaact agtaagatgc ctgctaaaaa catcacctta tatgctcaat atagcgccaa
     2821 tagctataca gcaacctttg atgttgatgg aaaaacaacg actcaagcag tagactatca
     2881 aggacttcta aaagaaccaa aaacgccaac aaaagccgga tatgctttca aaggttggta
     2941 tgacgaaaaa acagatggta aaaaatggga ttttgcgaca gataaaatgc cagcaaacga
     3001 tattacgctg tacgctcaat tcacgaaaaa tcctgtggca ccaccaacaa ctggagggaa
     3061 cactccgccg actacaaata acggagggaa cactacacca ccttccgcaa atatacctgg
     3121 aagcaacaca tcaactggga attcagctag cacaacaagt acaatgaacg cttatgaccc
     3181 ttataattca aaagaagctt cactccctac aactggcgat agctataatg cgctctacct
     3241 gttgatagga ttgttagcag taggaactgc agtggctctt actaaaaaag cacgtgctag
     3301 taaatagaag tagtgtaaag agctagatgt ggttttcgga ctatatctag cttttttatt
     3361 ttttaataac tagaatcaag gagaggatag tgtgaaagaa aagtacaacc caagaaggaa
     3421 atattgttta atctcaggtt tagctattat ttttagttta tggataatta ttggaaacgg
     3481 agcgaaagta caagcggaga ctatcaccgt gtcaacgcca atcaagcaaa tttttccaga
     3541 tgatgctttt gcagaaacaa tcaaagacaa tttaaagaaa aaaagtgtga cggatctagt
     3601 gacacaaaat gaattaaata gtatagatca aatcattgcg aataatagtg atattaaatc
     3661 cgttcaagga attcagtatt tacccaatgt gacaaagtta tttttaaacg ggaataaact
     3721 aacagatata aagcccttag caaacttgaa aaatttagga tggctttttt tagacgaaaa
     3781 taaaattaaa gacctaagtt cgatcaagga cttaaaaaaa ttaaaatcac tttctttgga
     3841 gcataatggt ataagtgata taaatggact tgttcattta ccgcaactgg aaagtttgta
     3901 tttgggaaat aataaactaa cggatataac gattctttca cgtttaacta aactggatac
     3961 tttgtctctt gaagataacg aaattagtga tattgtgcca ctttcaggtt taactaaatt
     4021 acagaatcta tatttaagta agaatcatat aagcgattta agagcgttag cagggcttaa
     4081 aaatctggat gttttagaat tgtttagcca agaatgtttg aataaatcta ttaatcatca
     4141 aacgaatcta gttgttccga acacagtaaa aaacattgat gggtcgcttg ttactccaga
     4201 aataataagt gatgatggcg attatgaaaa accgaatgtc aaatggcatt taccagaatt
     4261 tataaatgaa gtaagtttta ttttctatca accagttact gttggaaaag caaaagcacg
     4321 atttcatggg agagtaaccc aaccactgaa agaggtttac acagtaagtt atgatgttga
     4381 tggaacggta ataaaaacaa aagtagaggc agggacgcga ataactgcac ctaaacctcc
     4441 gaccaaacaa ggctatgttt ttaaaggctg gtatactgaa aaaaatggtg gacatgagtg
     4501 gaattttagt acggattata tgtccggaaa cgattttact ttgtacgcga tgtttaaagc
     4561 ggaaacgact gaaaaagcag tgaatttaac acgctatgtt aaatatattc gcgggaatgc
     4621 ggggatctac aaacttccaa gagaagataa ctcgcttaaa caaggaacgc tagcctcgca
     4681 ccgctgtaaa gctttaactg ttgatagaga agcgcgaaat ggcggtgaat tatggtacag
     4741 gttaaaaaat attggctgga ccaaagctga aaatctttcc ttagaccgtt acgataaaat
     4801 agaatatgac aaaggtgtta ctgcttatgc aagagtaaaa aatgcgccag ggaatgcagt
     4861 ttggacgaaa ccatacaata cagctggcgc aaccctcgtg aacaagcttt ccgtctacca
     4921 aggtaaaaat atgcgaatat tgcgcgaagc caaaacacca attactacgt ggtatcaatt
     4981 tagcattgat ggtaaagtaa ttggttgggt cgatacgcgt gcacttaaca cattttataa
     5041 acaaagcatg gaaataccaa tccaattaac tcgatacgtc agcgcaaata aaggaaatga
     5101 agcatactat aaagttccgg tagtagatag cccaatcaaa tggggaactt tagccaagta
     5161 taaaaatcaa acattaattg tcgatcgaac agccaccgtt gaaggtcagc tttggtatcg
     5221 gataagaact agctccactt tcattggttg gacgaaagct gctaatttaa gggcacagaa
     5281 atgacctacg aaaagctatt tctaaatatt ggggaagaaa aaagctacaa ctttaaattt
     5341 atgaaaaaag aactgattcg ctgaaaacgg atcagttctt ttttctttgg acttattttt
     5401 acaaatactt ttcgataatt tccatattct gcggccggtc tttgctttca agtacagaaa
     5461 tatcacgaac aatactatct aatttaattt tttccatttc aaattctatt ttttgttgga
     5521 gcaaatcgta tttactcgca agaacttgtt ggatattggc tccgacaatg cagtctggat
     5581 tggtttttgg atcaacgtga attaaattcg tattgccttc tatactctta taaacatcaa
     5641 gcagtgaaat ttcttctggt ggtctagcaa gaatcggatt tgctttgcca gtttgcgtag
     5701 taattaaatt ggactttttc aaattactca tgatttttct aatgttagcg ggatttgttt
     5761 ttacgctacc agcaataatt tcactcgata acaaattcgt atttttaaaa atttctatat
     5821 aagccaaaat gtggatagca tcactaaatt ggatagagta tttcattttt ttcaatcctt
     5881 tcaaattt
//
LOCUS       DASDYK010000135         5829 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.135, whole genome shotgun sequence.
ACCESSION   DASDYK010000135 DASDYK010000000
VERSION     DASDYK010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5829
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.135"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..332
                     /locus_tag="U0308_002586"
     CDS             <1..332
                     /locus_tag="U0308_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2317541.1"
                     /translation="SIDTLRYYEKEKLILPKRNEINRRIYDSSDITWINFIKKLKQTG
                     MPIKDIKEYAKLRYLGDQTIEQRMTLLYKQYDVLVEKREEIELYTQFLLNKIDIYKEM
                     LSARDIK"
     gene            416..1189
                     /locus_tag="U0308_002587"
     CDS             416..1189
                     /locus_tag="U0308_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2317542.1"
                     /translation="MKKYVVITGASSGIGYATAKGFAKRKNNLILIARREANLLKLKN
                     EIEKEVPEIEVLIKAIDLTKIDRLEKLFSELDPYFIETWINNAGLGYYSEVKNQSLTK
                     TLQLLHLNIEALTVLSVLYVRKYHDQSGTQLINVSSAGGYTMVPAAATYCASKFYVSS
                     FTEALSLELRESCSPLQAKVLAPAATKTEFGQKANDVSDYDYDKKFNNYHTSDEMAQF
                     LLDLYDSDKIVGMIDRKAFSFTLTENLFSYANQASSNQK"
     gene            complement(1252..2325)
                     /locus_tag="U0308_002588"
     CDS             complement(1252..2325)
                     /locus_tag="U0308_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM2317543.1"
                     /translation="MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGD
                     YIDPSLITKFEKETGIKVIYQTFDSNEAMMTKIEQGGTTFDIAVPSDYAISKMKEENL
                     LIPLDHSKLPNEKYLDPRFMDLSFDDDNKYSMPYFWGTLGIIYNKEMFPDKNFDTWNA
                     LFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVG
                     DEIKLLMADNEAGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWFDNMVIPKTAKNVD
                     GAHKFINFMLKPENAAINAEYVGYATPNEKAVKLLPKEISSDERFYPDMDELNNLEVY
                     DNLGKRMLSYYNELFLEFKMYRK"
     gene            complement(2322..3128)
                     /locus_tag="U0308_002589"
     CDS             complement(2322..3128)
                     /locus_tag="U0308_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317544.1"
                     /translation="MKKSKWGTIYLVLVFVILYAPIFYLIFYSFNKGGTMHNFSGFTL
                     GYYKEVFQDTRLLIIVLNTFVIALLSSVIATIIGVCGALAIKFMPKPFAKNSLLSLNN
                     VLIVSPDVIIGASFLIFFTILGVKLGFISVLVSHIAFSIPIVVLMILPKLQEMSPTLM
                     DAARDLGASQWQVLSKVILPYIMPGVLAGFFMALTYSLDDFAVTFFVTGNGFSTLAVE
                     IYSRARQGISLSINALSTLIFLFTIILVIGYYFINQRNTSKNIRTGATKE"
     gene            complement(3125..3934)
                     /locus_tag="U0308_002590"
     CDS             complement(3125..3934)
                     /locus_tag="U0308_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317545.1"
                     /translation="MNRRTRTVYLVPYVLWILLFVVAPILLIVYYSFFDVDGNFTVDN
                     YIHFFTPVYLKMTASSFWYAFLITVFTLLISYPTAYLLTKLKHKQLWLLLIILPTWIN
                     LLLKAYAFIGIFGTYGAANQFLEIIGIGSKQILFTDFSFLFVSTYIFIPFMILPIFNA
                     IEEINPTLIQASRDLGASSLTTFRRVIFPLTADGVKSGCQAVFIPALSLFMITRLIAG
                     NRVITLGTAIEEHFLVTQDWGMGSTIGVFLIIAMILIMFLTGSKKKRGARK"
     gene            complement(3934..5028)
                     /locus_tag="U0308_002591"
     CDS             complement(3934..5028)
                     /locus_tag="U0308_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317546.1"
                     /translation="MTETIIRFENVTKQFDNDPPVLDNVSFEIEKGKFYTLLGPSGCG
                     KTTILRLIAGFLEASEGQIYLGDKVINQIPANKRPVNTVFQDYALFPHLNVYENVAFG
                     LRIKKLKKDAIDEKVKEALRFVNLKGYEKREISEMSGGQRQRVAIARAIVNEPEVILL
                     DEPLSALDLKLRTEMQYELRDLQKRLGITFIFVTHDQEEALAMSDEIFVLNKGEIQQS
                     GTPIDIYDEPINKFVADFIGESNIVNGKMIQDFEVEFVERRFECVDQGFRPNEVVEVV
                     IRPEDLEITSAEKGQLQVTVDWMLFRGVHYEVGCIDTDGNEWLVHTTRKVRVGDKIGL
                     AFEPEAIHVMRLGETEEEFDKRLDSYDEVQ"
     gene            complement(5044..5586)
                     /locus_tag="U0308_002592"
     CDS             complement(5044..5586)
                     /locus_tag="U0308_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2317547.1"
                     /translation="MEIGKRIKNLRLSKNLTQEELGERTDLTKGYISQLERDLSSPSI
                     ETLFAILEVLGSTPKDFFDEEEHNQKVIYGELEHTFFEDEEKGYRIKWLVPESNEKEM
                     EPVLLEIEANSCFKSFEPSLSETFAYVLKGEVTVLLGRNEYVAKKGEAIYFHAADEHQ
                     IINRSNEQATLILVATESYL"
BASE COUNT         1899 a         1181 c          961 g         1788 t
ORIGIN      
        1 tatcaattga tacattacga tattatgaaa aagaaaaact aattttacca aaaagaaatg
       61 agattaaccg tagaatttat gatagttcgg atattacttg gattaacttc ataaaaaaat
      121 taaagcagac aggcatgcca attaaagata ttaaggaata tgcaaaactt cggtatctgg
      181 gagatcaaac catcgagcaa cgaatgactt tgttatataa gcaatacgat gttttagttg
      241 agaaaaggga agaaattgag ctatacactc agtttctatt gaataaaata gatatttata
      301 aggaaatgtt gagtgcacga gatattaaat aatttttgct cgtataagaa gagttgacat
      361 ggtgttaact ccagcattta tagttactcc atactaaatg ctaggaggaa ttgccatgaa
      421 aaaatatgtt gtcatcacag gtgcgagttc cggcatcggc tatgctaccg ctaaagggtt
      481 tgcaaaacgc aaaaataatc tcatcttaat tgccagaaga gaagctaatt tgttgaagtt
      541 gaaaaatgag attgagaagg aagtacccga aattgaagtc ctaatcaaag cgatcgattt
      601 gacaaaaata gaccgtttag agaaattatt ttctgaattg gatccttatt tcattgaaac
      661 atggataaat aatgctggtc taggatatta tagtgaagtt aaaaaccaga gcctaactaa
      721 gactttacaa cttcttcatt tgaatattga agcattaaca gttctatcag tcttgtatgt
      781 tagaaagtat catgaccaat caggtacaca gctaattaat gtttcttcag caggcggcta
      841 tacgatggtt cctgccgcag caacttattg tgctagtaaa ttctatgtta gttcctttac
      901 tgaagcatta agtttggaac tacgagaaag ctgctctcca cttcaagcaa aagtattagc
      961 accagctgct accaaaaccg aatttggaca aaaagcaaat gatgtaagcg actatgacta
     1021 tgacaaaaaa tttaataatt atcatacaag tgatgaaatg gcccaatttt tattggattt
     1081 gtatgacagc gacaaaattg tcggcatgat tgataggaaa gcattctcat ttactttgac
     1141 tgaaaatttg ttttcatacg caaatcaagc ctcttctaat caaaaataag gaattgtaaa
     1201 aaaaagactc ttgtatcata atacaagagt ctaattgttt gagatgaagc tttatttccg
     1261 atacatctta aactccaaaa ataattcatt ataatacgac agcattcgtt taccgaggtt
     1321 atcatatact tctaaattat tcagttcatc catatccgga taaaaacgtt catcactaga
     1381 aatttctttt ggtaacaatt tgacggcttt ttcatttggt gttgcatagc cgacatattc
     1441 agcgttaatt gcggcatttt ctggttttag catgaagtta ataaatttat gcgcgccatc
     1501 gacatttttc gccgtttttg gaatgaccat gttgtcgaac cataaattcg agccgtcttt
     1561 tggaattacg tattctaaat cttcattttc acttaacatt tccgccgctt ctccggagaa
     1621 agtaaccgcg acacccgcct cattgtccgc catgagaagt ttaatctcat cgccaacaat
     1681 tgcttttaca ttcggtgtca tcgtttctag cttgtctctg gcagcttgta ggtgagcttt
     1741 attcgtatcg ttcagtgagt aaccgagact attcagccca agccccatca cttcacgcgc
     1801 cccatcaatc agcaaaattt ggtttttcaa ttcgggatca aatagcgcat tccacgtatc
     1861 gaaattttta tccgggaaca tttctttatt ataaataatg ccaagcgttc cccagaaata
     1921 aggcatcgaa tatttattat catcatcaaa cgataaatcc ataaaacgcg gatcaaggta
     1981 tttttcattt ggtaatttgg aatgatcaag tgggatcaac aaattttctt ctttcatttt
     2041 gctaatcgcg taatcacttg gcaccgcaat atcaaaggtc gttccacctt gctcaatttt
     2101 cgtcatcatc gcttcattag aatcaaatgt ttggtaaatg accttgatgc ctgtttcttt
     2161 ttcaaattta gtaatgagcg atggatcaat gtaatcgccc cagttataaa tagtcagcgt
     2221 attgctccca gcatagccct cagagcggtt catcgttgtt gcaagtagca tcattaggag
     2281 tgcgacaaca atgactggca caaaaatttt cagcagttgc ttcattcttt cgtcgccccc
     2341 gtccgaatat ttttacttgt attacgttgg ttgataaagt aataaccgat cacgagaata
     2401 atcgtgaata agaaaatcag tgtcgacaaa gcattgatag aaagcgaaat cccttgtcta
     2461 gctcgggaat aaatttccac tgccaatgtc gagaagccat ttccagttac aaagaacgtc
     2521 accgcaaaat catctagcga gtacgttaat gccatgaaaa atccagctaa aacgcctggc
     2581 ataatatacg gcaaaataac cttagaaaga acttgccact ggcttgcacc taagtcgcgc
     2641 gccgcatcca ttaacgtcgg gctcatttct tgcaatttcg gcaaaatcat caatacgaca
     2701 atcggaatac taaaggcaat atgcgacact aggacggaaa taaaccctaa ttttacgcct
     2761 aaaatcgtga agaaaatcaa gaaactagca ccgataataa cgtccgggct aacaatcaac
     2821 acattattca aacttaaaag cgaatttttc gcgaatggtt ttggcataaa tttaatcgcc
     2881 agcgccccgc aaacgccgat aatagttgca atcaccgaag aaagcagcgc aattacaaat
     2941 gtatttaaaa caataattag taggcgcgta tcttggaaaa cttctttata atagccaagc
     3001 gtaaagccac taaaattatg catcgtgccg cctttattaa acgagtaaaa aatcaaatag
     3061 aaaatcggcg catataaaat cacaaaaaca agcactaaat aaatcgtacc ccatttactt
     3121 ttcttcattt acgcgcacct cttttctttt tcgagcctgt taggaacata attaaaatca
     3181 tcgcaataat taaaaatacg ccaattgtcg aacccattcc ccagtcttgc gttactagga
     3241 aatgctcttc aatcgctgtt ccgagcgtaa tgacgcggtt tcctgcaatt aatcgtgtaa
     3301 tcataaagag tgatagtgct ggaataaaaa cagcctgaca ccctgatttc acgccatcag
     3361 cagtgagcgg gaaaatcacc cgtctaaatg ttgtcaaact agatgcgcct aaatcgcgcg
     3421 acgcttgaat caacgtcgga ttaatttcct caattgcatt aaaaatcggt aatatcataa
     3481 acggaataaa aatataggtc gatacaaata agaaactaaa atccgtaaat aaaatctgtt
     3541 tcgaaccaat tccaattatt tccaaaaatt gattcgccgc cccgtatgtc ccaaaaatcc
     3601 caataaaggc atacgcttta agcagcaaat taatccaagt tggtaaaata ataagtagca
     3661 accacaattg tttatgtttt agtttcgtta ataagtaagc cgttggatac gaaatcaaca
     3721 acgtaaaaac agtaattaaa aatgcgtacc agaacgaact agccgtcatt tttaaatata
     3781 caggcgtaaa aaagtgaata taattatcta ccgtaaaatt gccatctaca tcaaaaaaag
     3841 aataataaac aattaataaa atcggcgcga ctacaaaaag taaaatccaa agtacataag
     3901 gaacaaggta aactgtacgg gtgcgtctat tcatcactgc acctcatcgt agctatcaag
     3961 ccgcttatcg aattcttcct ccgtttcccc gagacgcata acatgaattg cctctggttc
     4021 aaacgctaag ccaatcttat cacccacacg aacttttctc gttgtgtgaa caagccattc
     4081 atttccatca gtgtcgatac aacctacttc ataatgcaca ccacggaaaa gcatccagtc
     4141 tacggttact tgcagttgac ctttttcagc cgaagtaatc tctaaatctt ccggacggat
     4201 aactacttcc acgacttcat ttgggcggaa accttggtcg acacattcaa aacgtctttc
     4261 cacaaattcc acttcgaaat cttgtatcat tttgccatta acaatgttcg attcgccgat
     4321 aaaatctgcg acaaatttat taattggctc gtcgtaaata tcaattggcg taccactttg
     4381 ttgaatttcg cctttattta acacaaaaat ttcatcactc atcgcaagtg cttcttcttg
     4441 atcatgtgtc acaaaaataa acgtaattcc aagacgcttt tgcaaatcgc gcaattcata
     4501 ttgcatttcc gtacgtagtt ttaaatcaag cgctgatagt ggctcatcaa gtaaaataac
     4561 ttctggttca ttgacgattg cccgtgcaat cgcgacacgt tgtctttgtc caccagacat
     4621 ttcgctaatt tctctttttt cgtagccttt taagttaaca aagcgcagtg cttcttttac
     4681 tttttcgtca attgcatctt tttttagctt tttaatacgc agaccaaaag ccacattttc
     4741 atacacattt aaatgtggaa ataacgcata atcttggaaa acggtattta caggacgttt
     4801 attggctgga atttggttaa ttactttatc ccctagataa atttgtccct ctgaagcttc
     4861 taaaaatcca gctattaagc gcaaaatggt cgttttcccg caaccagatg ggccaagtaa
     4921 agtataaaac ttcccttttt ctatttcaaa gctgacattg tcaagcactg gtggatcatt
     4981 atcaaattgt tttgttacgt tttcaaaacg aataattgtt tctgtcacaa tcatttacct
     5041 cccttataaa tatgactctg tcgctactaa gatgagtgtc gcttgttcat tcgatcgatt
     5101 aattatttga tgttcatctg cggcgtggaa ataaattgct tccccttttt tggctacata
     5161 ctcatttcga ccaagcagca cggtcacttc cccttttagc acgtaggcaa aagtttctga
     5221 aagtgatggt tcgaagcttt taaaacagct atttgcctct atttcaagta gcactggttc
     5281 catttctttt tcattcgatt ctggaacaag ccacttaatt ctgtaacctt tttcttcatc
     5341 ttcaaagaaa gtatgctcta gttctccgta aattactttt tgattgtgtt cttcttcatc
     5401 aaagaaatct ttcggagtag aacctaacac ttccaaaata gcaaataacg tttcgataga
     5461 aggagaactc aaatctcgtt ctagctgaga aatatatccc ttcgtcaaat ccgttcgttc
     5521 gcctaattct tcttgtgtca aattcttact gagcctaaga ttttttatgc gtttgccaat
     5581 ttccatgtca atgtcctttc tttcaagttt agtgatagta aacctcaagt cacagaagtt
     5641 tactaatatt aaacacgaag tttacttaca gcaagctaca ttatacaaca aagcttccac
     5701 atgaacaata gtttttttga atttccctaa gatagacaac gtttattttt agtgctaaaa
     5761 tttctttaat aaaacagctt aggtggcaga tattcatgaa aaaatatcgc ttttcagaac
     5821 tcaatatca
//
LOCUS       DASDYK010000136         5785 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.136, whole genome shotgun sequence.
ACCESSION   DASDYK010000136 DASDYK010000000
VERSION     DASDYK010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5785)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5785)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5785
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.136"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..934)
                     /locus_tag="U0308_002593"
     CDS             complement(<1..934)
                     /locus_tag="U0308_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2317548.1"
                     /translation="MKTIKLLKLQLENFKGIKELEIDFQDNTSIYGANASGKTTILDA
                     FTWLLFDKDSTNKKDFAIKTLDTEGNVIHKLNHVVTAVLNIDGEQIELSKKYMEKWTK
                     SRGKLEQELTSHTTEYYIDEIKKKANEYKSFISELLDEELFKLITNPLYFNEQFDWKK
                     RRAMLIKIAGDVTDAEVMSADDSLKDLRIFLGKHSIEDKLIQINEQRKNLRKRLELIP
                     ELVNEASKAKQDTTGLNPSDLSGELTVIEEQIQLIEQEKITLKNGGIQTELNKQKANI
                     ELELTKIKANEQKEVQEQLMNKKEEIFTERNGLKN"
     gene            complement(921..1262)
                     /locus_tag="U0308_002594"
     CDS             complement(921..1262)
                     /locus_tag="U0308_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317549.1"
                     /translation="MTQKSIEEVKFEEAKKLITELQAIATFNESITCAVNVSFNDGKG
                     IHSASSAIGGKSELLKMYGDIAEAIVYEFMKDHDCVCNVNETIEHAIEGALNGFQNFK
                     QDAKEKTDENN"
     gene            complement(1280..1507)
                     /locus_tag="U0308_002595"
     CDS             complement(1280..1507)
                     /locus_tag="U0308_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317550.1"
                     /translation="MQIKTNELIEILKNSRTHSLERVKALEINLFKYKRLNTKPPAQL
                     TERIANHEKKIETIKKLEDELKQSENEVCKF"
     gene            complement(1687..1971)
                     /locus_tag="U0308_002596"
     CDS             complement(1687..1971)
                     /locus_tag="U0308_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317551.1"
                     /translation="MEEIRPLYKKIKIEDTTYIVTLTPINDKSGKKTFKGIMVDMSLD
                     GEHFARDRFASNVDTGVIQNWMLNMHKASQKVERVLEAFEEWDGELNEFW"
     gene            complement(2121..2285)
                     /locus_tag="U0308_002597"
     CDS             complement(2121..2285)
                     /locus_tag="U0308_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317552.1"
                     /translation="MLTAVLITLSLGIVMNIALYAYQKGWEKKNVDTDLDSDCVDTRV
                     TRSDKPNRKC"
     gene            complement(2279..2437)
                     /locus_tag="U0308_002598"
     CDS             complement(2279..2437)
                     /locus_tag="U0308_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317553.1"
                     /translation="MSKVCDKENAVKVEIVYTELTQEQEQAMFNFFKSRSFPRIIKKL
                     EEEERKKC"
     gene            complement(2450..2974)
                     /locus_tag="U0308_002599"
     CDS             complement(2450..2974)
                     /locus_tag="U0308_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317554.1"
                     /translation="MTVIKSSINASKVMRYVDNIPQKQLADLLLTSRPNVSHMQTGRR
                     RMQQDIATSALNNVQSNLFKLALTHEFSELIPDVFDGPAINKNSLSYLVMYEQEANEF
                     SANIDEIMRIFVKPASQLTQGERLTARDGLKELIDALGWGYNLLFYASDYLNIDAHKL
                     ISEQDESWKMKKWI"
     gene            complement(3051..3236)
                     /locus_tag="U0308_002600"
     CDS             complement(3051..3236)
                     /locus_tag="U0308_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2317555.1"
                     /translation="MEWLKKYRLDKDLTQQEVADQCGIPKNTYASIEQGKRRPSPERA
                     KIIASNLGFDWTIFFNN"
     gene            3395..3823
                     /locus_tag="U0308_002601"
     CDS             3395..3823
                     /locus_tag="U0308_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2317556.1"
                     /translation="MFALRIKELRKESKKTQEEMAKILGVAKTTYASYEQAKRMPDAE
                     IQNKIANYFDVSLDYLHGRSRHKNINAEGFTPKEEIDMKKRMDALREDLKNGDGLLYD
                     GEPITTEAMESILDAMEFAEKQATRINRKYAPKDKKNNIE"
     gene            3840..4259
                     /locus_tag="U0308_002602"
     CDS             3840..4259
                     /locus_tag="U0308_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HEM2317557.1"
                     /translation="MWPTAMIEKLRNKHHTSDPFELCEILNIIVTPWDLANDTNGFYK
                     YVRRNRFIFYNSNLPDHQIKYVVAHELGHAVLHTRINATFTKSIYWSNLNKIELEAHH
                     FAVSLLLSDIDIESFDTKKEICLYTGIPLELENFIMK"
     gene            4307..4699
                     /locus_tag="U0308_002603"
     CDS             4307..4699
                     /locus_tag="U0308_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317558.1"
                     /translation="MGIFSKVETLEIISGKEQIGLKSNLTYMTEIAPGVVVFDNNETQ
                     YVYQGFIWNQDSKRSAGKTATGAIVGGVLTGGIGAIAGGAIGAKKKDISYAVISLLRV
                     SDASPVQLIIKCNKKKASKLGSFTIGRV"
     gene            4789..>5785
                     /locus_tag="U0308_002604"
     CDS             4789..>5785
                     /locus_tag="U0308_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM2317559.1"
                     /translation="MTVGIYIRVSTEEQVKEGFSISAQKEKLKAYCTAQGWEDFKFYV
                     DEGKSAKDMHRPLLQEMITHIKKGLIDTVLVYKLDRLTRSVVDLHNLLSIFDEYNCAF
                     KSATEVYDTSSAMGRFFITIISSVAQFERENTSERVSFGMAEKVRQGEYIPLAPFGYV
                     KGPDGKLIINEAEKEIFLHVVNMVSTGYSLRQTCEYLTNIGLKTRRSNDVWKVSTLIW
                     MLKNPAVYGAIKWNNEIYENTHEPLIDKTTFDKLANILSIRSKSTTSRRGHVHHVFKG
                     RLICPQCGKRLSGLRTKYVNKNKETFYNNNYRCATCKEHRRPAIQISEQKIEKAFI"
BASE COUNT         1810 a         1025 c          921 g         2029 t
ORIGIN      
        1 catttttaag tccatttctt tcagtaaata tttcttcctt tttgttcatc agttgctctt
       61 gtacttcttt ttgctcattt gctttgattt ttgtaagctc aagttcaata ttcgcttttt
      121 gcttatttag ttcggtttgt attccgccgt ttttcaaagt aattttttct tgttcgataa
      181 gttgaatctg ttcttcaatt actgttaatt cccctgaaag atcactagga tttaagccgg
      241 tagtatcttg tttggcttta gaagcttcat ttacaagttc ggggataagt tctaatcttt
      301 tacgcaagtt cttgcgctgt tcattaatct gaattaattt atcttcaatc gagtgctttc
      361 caagaaagat ccttaaatct ttcagtgaat catctgcact cattacttct gcgtctgtta
      421 catcgcctgc gattttaatt agcattgcac gtcttttttt ccagtcaaac tgttcattga
      481 agtacaatgg gttagtaatt agtttgaaaa gttcctcgtc tagtagctcg ctaataaatg
      541 acttgtattc attcgctttc tttttgatct cgtcgatata atattctgta gtatgacttg
      601 ttaactcttg ttctagtttt cctcttgatt tggtccactt ctccatatat tttttagata
      661 attctatttg ctcgccgtcg atattcaata ctgcagttac aacatgattc aacttgtgaa
      721 taacgttgcc ttcagtatcc agcgttttaa tagcaaagtc ttttttattt gtgctgtctt
      781 tatcgaataa aagccaagta aaagcatcta gtatcgttgt tttccccgaa gcattcgctc
      841 cgtatattga tgtattatct tgaaaatcaa tttctagttc cttgatacct ttaaaatttt
      901 ctagttgaag ctttagcaat ttaattgttt tcatctgttt tctcctttgc atcttgtttg
      961 aaattttgaa atccatttaa tgccccttct attgcatgtt caatggtttc attcacgttg
     1021 cacacacaat catggtcctt cataaattca tatacaattg cttcggcgat gtccccatac
     1081 atctttaaga gttcgctttt ccctccaatt gcagatgacg cactgtgtat accttttcca
     1141 tcattgaagc ttacattcac ggcacaagtt atgctttcat taaatgtagc aattgcttgt
     1201 aactcagtta ttaatttttt tgcctcttca aatttcactt cttcaatact tttttgtgtc
     1261 atcttgaatc ctccaatttt taaaatttac aaacttcatt ttctgattgc ttcaattcgt
     1321 cttctaattt ttttattgtt tcaatcttct tctcgtgatt agcaatcctt tcagttagtt
     1381 gtgccggtgg tttcgtgttt aatcgtttgt acttgaataa attaatctct aaagccttga
     1441 ccctttctaa tgagtgggtt cttgaattct ttaaaatttc aatgagctca ttagtcttaa
     1501 tttgcataat aaagacccct ttctaaaaaa ataaatttgt caaaacgggg ctaatcgcat
     1561 atactataag taattcaact cttatattta gcgaatagct atctatgtca gactcgtgtt
     1621 agcgcacgag tttatttttt tgtcgttaca atcattactc cttctacaat cgtgatgctt
     1681 tgtgtatcac cagaattcat tcaattcacc atcccactct tcaaaagcct caagaactct
     1741 ttcaactttc tgcgatgctt tatgcatgtt caacatccaa ttttgaataa ctccagtgtc
     1801 tacatttgaa gcaaatctat ctctagcaaa atgttcaccg tctaaggaca tatctaccat
     1861 gattcctttg aaagttttct ttccgctctt atcattgata ggtgttaaag tcacaatata
     1921 cgtagtatct tcaatcttaa tttttttata cagtggtctt atttcctcca ttttctaaat
     1981 cctccttctt cgcttttaaa agccactatt aatgctacaa acactccaaa tccaacaaac
     2041 aataatccta tattcatttg taaatccagc tttcatacca gttagccaag ccaacttttt
     2101 ttatcttctt gtataacctt ttagcatttt ctattaggtt tatcagaccg agtaacacga
     2161 gtatccacac aatcgctatc caaatcggta tcgacatttt tcttttccca acccttctga
     2221 tacgcataaa gcgctatatt cattacaatt ccaagactca gtgtgattaa tactgctgtt
     2281 aacatttttt tcgctcctct tcttctagtt tttttattat tcgcggaaaa gagcggcttt
     2341 taaagaagtt aaacatagct tgttcttgct cttgagttag ttctgtataa actatttcaa
     2401 ccttcacagc attttcctta tcacaaactt tgctcatatt tccaacacct caaatccatt
     2461 ttttcatttt ccagctttca tcttgctcac ttattaattt atgtgcatca atgtttagat
     2521 aatcacttgc ataaaataaa aggttataac cccaaccaag cgcatcgatt aattccttca
     2581 aaccatctct tgcggttagc ctttctcctt gtgttaattg gcttgctggc tttacaaaaa
     2641 tcctcattat ctcgtcaata tttgcactga attcattagc ttcttgttca tacatgacaa
     2701 gatatgataa cgaattttta ttaattgcag gaccgtcaaa aacatctgga attaattcac
     2761 taaattcatg cgttagtgct aatttgaata aattactttg cacattattt aatgctgaag
     2821 ttgcaatatc ttgctgcatc cttcttctac ctgtttgcat atggcttaca ttaggtctac
     2881 ttgtcaaaag taaatccgct aattgttttt gaggaatatt atccacataa cgcataactt
     2941 ttgatgcgtt aattgaagat ttaattactg tcacttgctc tcctttccga tgtatcattt
     3001 tttttacgca tgatacatat ccttaagtta aaataataca tatcgcgtac ttaattgtta
     3061 aaaaaaatag tccagtcgaa tcccaaattg ctcgcgatta ttttcgcgcg ttcgggagaa
     3121 ggccgtcttt taccctgttc aatagatgca tatgtgtttt taggtatacc gcattgatca
     3181 gctacttcct gttgtgtcaa gtctttatct aatctatatt tctttaacca ctccatgtta
     3241 gcaccccttt ctaagtagta cgaattgcgt acttttataa taatacgcat tttgtattat
     3301 gtcaatagat aaatactctt tttgtattgt tttttaattt aaaatagtaa gtacgcaatt
     3361 tgtatagtat aatccgaaac gaggaggtgc acatatgttc gcattaagaa ttaaagaatt
     3421 gagaaaagaa agtaaaaaaa cacaagaaga aatggctaaa atattgggcg ttgcaaaaac
     3481 tacttatgct tcatacgaac aagccaaaag aatgcccgat gctgaaattc agaataaaat
     3541 agctaactat tttgatgtaa gtctggacta tttacatggc agaagtcgcc ataaaaatat
     3601 aaatgcagaa ggtttcactc ccaaagaaga aatagatatg aaaaaaagaa tggatgctct
     3661 tagagaagat ttgaaaaacg gggacggatt actttatgat ggtgagccga ttacaaccga
     3721 agccatggaa agtattttag atgcaatgga attcgctgaa aaacaagcaa ctcgtatcaa
     3781 tagaaagtac gcgcctaaag acaaaaaaaa taatatagag taaatcgggg gtattctata
     3841 tgtggccaac tgcaatgatt gaaaaactta gaaataaaca tcacacatct gatccatttg
     3901 aattatgcga aatactaaat attattgtta cgccttggga tttggccaac gatactaatg
     3961 gcttctataa gtatgtgcgt agaaatagat tcatttttta caatagcaat ttacctgatc
     4021 atcaaattaa gtatgttgta gcacacgaat tgggacatgc agtactacat acgaggatta
     4081 atgctacatt tacaaaatca atatattggt ctaacctaaa caaaattgag ttggaagcac
     4141 atcactttgc tgtaagttta ttgttgtcag atatagatat tgaaagtttt gatacaaaaa
     4201 aagaaatatg cctatataca ggtataccat tagaattaga aaattttata atgaaataat
     4261 cgtgcattac aattatataa ttaactagaa aaaggagaag atacagatgg gtatttttag
     4321 caaagtagaa acacttgaaa taatcagtgg taaggagcaa atcggattaa aatcaaatct
     4381 aacttatatg acagaaattg cacctggcgt tgtcgttttt gacaataatg aaacacaata
     4441 tgtctatcaa ggatttatat ggaatcaaga ttcaaaacga agtgcaggta agactgcaac
     4501 aggagcaatt gtaggtggtg ttcttactgg tggaatcggt gcaatagctg gaggagcaat
     4561 tggggctaag aaaaaagata tctcatatgc ggtaatctct ttacttcgtg tttctgatgc
     4621 gtcacctgtt caattaatta ttaagtgcaa taagaagaaa gcatctaaac ttggaagttt
     4681 tactatcgga agagtttaaa tagcttgatt ataaagtttt gccctactcg ggcttttctt
     4741 taaaaccaaa aacagaacat acgtactatt tcggaggtga gcaagttcat gactgtaggg
     4801 atttatataa gggtttccac tgaagaacaa gtgaaagaag gcttttctat atcagcacag
     4861 aaagagaagt taaaagcata ttgcacagct caaggatggg aagatttcaa gttttacgtc
     4921 gatgaaggta aatcagcaaa agatatgcac cgccctcttc tacaagaaat gattacacat
     4981 ataaaaaagg gacttattga cacagttctt gtatataaat tggatcgtct tactcggtct
     5041 gttgtagatt tgcataattt attaagtata tttgatgaat ataactgtgc atttaaaagc
     5101 gctactgaag tctacgatac ttcttccgct atgggcagat ttttcattac aataataagt
     5161 tcagttgctc aatttgaaag agagaataca tctgagcgtg ttagttttgg gatggctgag
     5221 aaagtgcggc aaggagaata tatacccctt gctccattcg gttatgttaa agggcctgat
     5281 ggaaaactta ttataaatga agcagaaaaa gaaatatttt tacatgtagt aaatatggtt
     5341 tctactggtt actcattacg acaaacatgt gaatatctaa ctaacattgg gttgaaaacc
     5401 aggcgttcaa atgacgtgtg gaaagtatct acactaatct ggatgttaaa aaatcccgct
     5461 gtttatggtg caataaaatg gaataatgaa atatatgaaa atacacatga gccactaatt
     5521 gataagacaa catttgataa actggcgaat attctatcaa taagaagtaa gtcgacaaca
     5581 agtcgtcgtg gccacgttca tcacgttttc aaaggaagat taatatgtcc tcaatgtgga
     5641 aaaagattat ctggattaag aacaaaatat gtaaataaaa ataaggaaac tttttataac
     5701 aataactatc gttgtgctac ctgcaaagaa cataggcgtc cagcaataca gataagcgag
     5761 caaaaaatag agaaagcatt tattg
//
LOCUS       DASDYK010000137         5690 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.137, whole genome shotgun sequence.
ACCESSION   DASDYK010000137 DASDYK010000000
VERSION     DASDYK010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5690
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.137"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            88..1449
                     /locus_tag="U0308_002605"
     CDS             88..1449
                     /locus_tag="U0308_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM2317560.1"
                     /translation="MKHSDNYYLTKASIPKAIAHLSIPMMLGMSVGVIYNLINAFFIG
                     LLHDTSMLTAVTLGLPMFTVLMAIGNMFGVGGGTYISRLLGKEEGIKAKQVSAFVLYG
                     SLVLGIICAIILGFLINPVTHFLGADATSFLHTKNYTLALLICSPFIIANFALEQVVR
                     SEGASRVSMNGMIIATVVNLVFDPLLILYFDFNVVGAAVSVGLASLFSLIYYAWYLEK
                     KSEYLSIRFKWFKATKEIVQNVFKIGVSELLLSLFLIVTTLVLNHYSMIYGEGVVAGF
                     GVALRVVQLPEFICMGLYMGIIPLLAYNYGSGNIARFEKAIRATAISIGLIVLLLSSL
                     VFLFRFQVMHLFSDSQSVITLGVHIMVAMLISSLFSGFTGLFTSTFQAIGKAIPATIM
                     SVSQGIIFIPVIILGQHYFGLMGVIWSLTATEILTCIIGVTLFTIHNVKIASSAKTKD
                     LAV"
     gene            1731..2498
                     /locus_tag="U0308_002606"
     CDS             1731..2498
                     /locus_tag="U0308_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEM2317561.1"
                     /translation="MDTAMILEYGWVLLVLIGLEGILAADNAVVMAVMVKHLPDKQQK
                     KALFYGLMGAFVFRFGALFLISFLANVWQVQALGAAYLLYIAISHIWKHAKGKDGEKE
                     KKEKAGSGFWMTVLKVEIADIAFAIDSMLAAVALAITLPETGWGHIGGIDTGQFAIMF
                     LGGLVGLIIIRFAATQFVKLLKSYPSLETAAFLIVGWVGVKLVIYTLAHPSLGVIPHS
                     FPESTLWKLIFWGVMILIIIWGWFVSYRSKKKAETTK"
     gene            2601..3368
                     /locus_tag="U0308_002607"
     CDS             2601..3368
                     /locus_tag="U0308_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEM2317562.1"
                     /translation="MDVSIWGEYALVFLVLVVLEGILSADNAVVMAVIVKGLPHDKQR
                     KALFYGLVGAFVFRFIALFLISFLVKIWEIQAIGAVYLLYLAIKHMWRLKKGKQEEVK
                     EASEAKSTSFWGVVARVELTDIAFALDSMLAAAALVVTLPDLGNFDIGGMNGGQFIVM
                     FLGGIAGLVVIRFAATQVVKLLERYPTLETAAFLIVGWVGVKMAVLTLAHPSVAIIPE
                     DFPDSAVWKLTFWSVMIIIGLGGYIIARKKEKKTKRV"
     gene            3421..4746
                     /locus_tag="U0308_002608"
     CDS             3421..4746
                     /locus_tag="U0308_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEM2317563.1"
                     /translation="MTPVQVIIAYYFIAVTISTIVLSLPFTLQKGVKVSFIDTLFTAA
                     SSVSVTGLATVDVSQTYSTAGIWVLMAIFQIGGLGVMMISTFFYLILKRRIGLKQRQL
                     IMTDTNQFTMSGMVRMLREILVLIFGIELIGALILGIYFIPLYPNFWDAMFQGLYNSV
                     SLVTNAGVDITGKSLMPFANDYFVQFISILLIIAGAIGFPVLLETRRFLFEKNTLIPF
                     RFSLFVKVTTLTYFVLLIVGGLLIWLFEYHHFFSGKSWDFGFFNSMFLSATSRSAGLQ
                     TIDSGALSISTLLLVSFLMFIGASPSSVGGGIRTTTFAITILFIYSVIRGRKHVYIFG
                     RELHQEDVRKSLAVTLVAGFLSISAIVVLMQTETASLIAVIFEVFSAFGTTGLSVGLT
                     PDLSTPGKIIIIALMFIGRVGIMYSMLSLRNKNQPKNAIRLPKEKIITG"
     gene            complement(4826..5194)
                     /locus_tag="U0308_002609"
     CDS             complement(4826..5194)
                     /locus_tag="U0308_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HEM2317564.1"
                     /translation="MGSRKPEIIIGLIGSIIGILVGFWIINYGDSVTDYIQTFTYLPG
                     ELGNELANLGWITLIASVVALIASLLIKSAPRGWGVILVIIGIVLFFVIGTAWIISGI
                     LITLTGLMGIFRRPVPKSKY"
     gene            complement(5224..>5690)
                     /locus_tag="U0308_002610"
     CDS             complement(5224..>5690)
                     /locus_tag="U0308_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEM2317565.1"
                     /translation="MILGGIFIVLLLSFITFHPNLNDKWFLGSKPYANFVEVKSLGLF
                     IRALVYLISFGSIAAFFSFIPRKRLFFTKWGKNTLYVYLLHGFFIKFFREGSQTDFQY
                     SPSTFLLLFVVTFVLTVLLSSRLVKIFVQPVIELRVSMLRDVFSRLTKRESY"
BASE COUNT         1649 a          905 c         1227 g         1909 t
ORIGIN      
        1 atctacttag taaaattgat gacaatacgg aataaaaaaa tttaactata tagttagagt
       61 tctaactaat tttgaggggg aaccaaaatg aaacactcag ataattatta tttaacaaaa
      121 gcgagcattc ctaaagcgat agcacattta tctattccga tgatgcttgg aatgtctgta
      181 ggggtcatat ataaccttat caatgcgttc tttataggct tgttgcatga tacgtcgatg
      241 ttaaccgcgg tgacacttgg attaccgatg ttcaccgttt tgatggcgat tggtaatatg
      301 tttggagtag gtggtggaac gtatatttcg cgcttgcttg ggaaagaaga gggaataaag
      361 gcaaaacaag tatccgcctt tgttttatat ggaagtttag tattaggaat tatctgcgcc
      421 atcatacttg gctttttgat taatccagtt actcattttc ttggggcaga tgcaacgagc
      481 tttttacaca cgaaaaatta tacgttggcg cttttaattt gtagcccgtt tattattgcg
      541 aattttgctt tagaacaggt ggttcggtct gagggagctt cgcgggtttc tatgaacgga
      601 atgataattg ctacagttgt taatttagta tttgatccat tgcttatttt gtattttgat
      661 tttaatgtgg tgggggccgc agtttcggta ggattagcaa gtttattttc gctgatttac
      721 tatgcttggt atttagagaa gaaaagtgag tatttatcga ttcgttttaa atggtttaaa
      781 gcaacaaaag aaatcgttca aaatgtgttt aaaattggtg tttcagagtt gcttttatcg
      841 ttattcctca ttgtgacaac actcgtttta aatcattatt cgatgattta cggggaagga
      901 gtagttgcag gttttggcgt ggcgcttcgg gtggtgcagc tccctgaatt tatttgtatg
      961 ggactttaca tggggataat tccgctgtta gcttataatt acggttcggg taatattgcg
     1021 cggtttgaaa aagcaatacg ggctactgca attagtatcg ggcttattgt gctcttactt
     1081 tcgagtctgg tattcctctt ccgtttccaa gtgatgcatc tatttagtga cagtcaaagt
     1141 gtgataacgc ttggtgtgca tattatggtt gcgatgttga tatcttctct tttcagtgga
     1201 tttacggggc tgtttacgag tacttttcaa gcgattggga aagcgattcc ggctacgatt
     1261 atgtctgttt cacaaggcat catttttatc ccagtcatca ttttaggaca acattatttc
     1321 ggacttatgg gtgtgatttg gtccttaaca gcgactgaaa ttctgacatg tatcattggt
     1381 gtgacactat tcacaatcca caatgtcaaa atagctagta gcgcaaaaac gaaagactta
     1441 gccgtttaaa aagtttgtga gaaaaattag ttgacgagaa gttctatatt atggtattat
     1501 tctctaggta atcatatatc gttctttgac aaatgtcaga ggggagtagc gctgattagc
     1561 tttttaatca ggataaagtc gtcattacat gatagagata tcatcggttt tatcacattt
     1621 aattttaaat gttagcgaga cctttgcctt tacgggcagg tctcgctttt ttgtttcttc
     1681 aaaataggag atctttgaca ttttaataga acaaaggagg aaaagaatta gtggatacag
     1741 caatgatttt agagtacggt tgggtgttac ttgtcctaat cggtcttgag gggattttag
     1801 cagcagataa tgcagtggtt atggctgtga tggtcaaaca tctcccagat aaacaacaga
     1861 aaaaagcgtt attttacgga ttgatgggtg cctttgtttt ccgttttggc gcattattct
     1921 taatttcctt tttggcaaat gtttggcaag ttcaagcgct tggtgccgca tatttactat
     1981 atatcgctat tagtcacatt tggaaacatg caaaaggaaa agacggagaa aaagagaaga
     2041 aggaaaaagc tggctctggt ttttggatga cagttctaaa agtagagatt gccgatattg
     2101 cgtttgcgat tgattccatg cttgcggcag tagcacttgc cattactctt ccagaaacag
     2161 gatggggaca cattggagga attgataccg ggcaatttgc gattatgttc ttaggtggac
     2221 ttgtcggcct cattattatt cgttttgcag caacacaatt tgttaaatta ctaaaaagtt
     2281 atccgagtct cgaaacagcc gcatttttaa ttgttggttg ggtaggcgtg aagcttgtta
     2341 tttatacact agctcatcca agtcttgggg taattccaca cagcttccct gagtcaacac
     2401 tgtggaaatt aattttctgg ggtgtgatga ttcttattat tatatgggga tggttcgttt
     2461 cctatcgtag taagaaaaaa gcagaaacaa ctaaataatt tttaatagac cagaagtgca
     2521 tatttgtact tctggtttta catacaacca gatgctgaaa acacaatttt atgatagagt
     2581 agaaggatgg tgaatgagga atggatgttt ctatttgggg cgaatatgcg ttagttttcc
     2641 ttgttttagt agtacttgaa ggaattcttt ccgcagataa tgccgtagtt atggcagtaa
     2701 ttgttaaagg tttaccgcac gataaacaac gaaaagcctt gttttatggg ttagtaggtg
     2761 cctttgtttt tcgttttatt gcactatttt taatttcatt tttagtaaaa atttgggaaa
     2821 tacaagctat cggcgcggtt tatttattgt acttagcaat taagcacatg tggcgcctta
     2881 aaaaaggtaa acaagaagaa gtcaaagaag catcagaagc caaatcaact tccttttggg
     2941 gtgtagtagc tcgtgtggaa ttgacagata ttgcttttgc actggattcc atgttagctg
     3001 cagcagcatt agtagttact ttgccagatt tagggaattt tgatattggg ggaatgaacg
     3061 gtgggcaatt tatcgtgatg ttccttggtg gtatcgcagg acttgtcgta attcgttttg
     3121 cagccacaca agtggttaaa ttattagagc gttaccctac acttgaaaca gcagcgtttt
     3181 taattgttgg ttgggttggt gtgaaaatgg cggttctaac gctagcacat ccttctgtag
     3241 caattattcc agaagatttt ccggattcag cggtttggaa gctgacattc tggtcggtta
     3301 tgataataat aggtttgggt ggttatatca ttgcgagaaa aaaagagaag aaaaccaaaa
     3361 gagtttgaat atgatcagga agtaaaattg cgcagaagat taaaactggt gttagcacgt
     3421 atgacaccag ttcaagtaat tatcgcgtat tattttattg cggttacgat ttctaccatc
     3481 gtcttaagct taccgttcac tctacaaaaa ggggtcaagg tgtcgtttat tgatactcta
     3541 tttacagcag cgagttcggt tagtgttacc gggcttgcaa cagtagacgt tagccagact
     3601 tatagtactg ctggaatttg ggtcttaatg gcgattttcc aaattggtgg acttggtgtt
     3661 atgatgatta gtacgttttt ctatttgatt ttaaaaagac ggattggctt aaaacaacgt
     3721 caattaatta tgacggatac taaccaattt acaatgagcg ggatggtccg gatgcttcgt
     3781 gagattctag tgcttatttt cggtattgag ttaattggag ccttgatttt agggatttac
     3841 tttattccgc tgtatccgaa tttttgggac gcgatgttcc aaggattata taattctgtt
     3901 tcactcgtaa ccaatgcggg ggttgatatc accggtaaat cgctaatgcc ctttgccaat
     3961 gattatttcg ttcaatttat ttcgattttg ttgattattg caggtgcgat aggttttcct
     4021 gtattgcttg aaacacgtag atttttattt gaaaaaaata cgttaattcc gtttcgcttt
     4081 tcccttttcg tgaaagtaac gacgctaact tattttgtgc ttttaattgt gggtggttta
     4141 cttatttggc tgtttgaata tcatcatttc tttagtggga aaagttggga tttcggtttc
     4201 tttaattcaa tgttcttatc tgcaacatca cgaagcgcag gcttacaaac gattgatagt
     4261 ggggcgttgt caatctctac gttgttgctc gtttccttct taatgtttat tggagcatcg
     4321 ccaagttctg ttggtggtgg gattcgaacg acaacttttg caattacgat tttattcatt
     4381 tattcggtta tccgaggtcg gaaacatgtg tacatttttg gtcgtgagct tcatcaagag
     4441 gatgtgcgga aatcgcttgc ggtgacgtta gtagcagggt ttttgagtat atcggccata
     4501 gtcgttttaa tgcaaacaga gaccgcctcg ttaattgccg tcatttttga agtcttttcg
     4561 gcgtttggta ctacagggct ttctgtaggt ttgacaccag atttatctac gccgggtaaa
     4621 attattatta ttgcattaat gtttattggg cgcgttggta ttatgtactc aatgctgagt
     4681 ttaagaaata aaaatcaacc taaaaatgcg attcgtttac caaaagagaa aattattaca
     4741 ggttaatata aaagccattc tgattgcaga atggcttttt tgtccatgaa aaaacctctt
     4801 gatcaaaatg accaagaggt gatttttaat attttgattt tggaacgggg cgtctgaaaa
     4861 tacccattaa accagttaaa gtgattaaga ttccggagat aatccaagca gttccgataa
     4921 cgaagaagag cacgataccg ataattacta agataacacc ccaaccacgt ggagctgatt
     4981 tgattagaag ggaagcaatt aatgcaacta cagatgcgat taatgtaatc caccctagat
     5041 ttgctaactc gttacctaat tcaccaggta aataagtaaa tgtttgtata taatctgtga
     5101 ctgaatctcc ataattaata atccaaaagc caactagaat cccaatgata gagccaatta
     5161 atccgataat aatttctggt tttcttgaac ccataataca acctcctttt tctatctata
     5221 cgtttaataa ctttcccgtt ttgttaagcg gctaaacaca tctcgcagca tagataccct
     5281 aagttcgatt accggttgaa cgaatatttt taccaatcga cttgataata ataccgttaa
     5341 aacaaaagta acgacgaata gaagtaaaaa tgttgatggg ctatattgaa agtcagtttg
     5401 actaccttca cgaaaaaact taataaagaa gccatgcaac aaataaacat ataacgtatt
     5461 tttaccccat ttagtgaaaa ataacctctt tctaggaata aaactgaaaa aagccgcaat
     5521 cgaaccaaaa ctaatcaagt agacaagtgc gcgaatgaat agacctaacg actttacttc
     5581 cacaaagttt gcataaggct tagaacctaa aaaccattta tcatttaagt tagggtgaaa
     5641 tgtaataaat gatagaagta aaacaatgaa aatgcccccg agaatcatga
//
LOCUS       DASDYK010000138         5679 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.138, whole genome shotgun sequence.
ACCESSION   DASDYK010000138 DASDYK010000000
VERSION     DASDYK010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5679)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5679)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5679
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.138"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            370..1485
                     /gene="pdhA"
                     /locus_tag="U0308_002611"
     CDS             370..1485
                     /gene="pdhA"
                     /locus_tag="U0308_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEM2317566.1"
                     /translation="MASKTKKAIIDVKKQFEAVHKQFELVQILNEKGEIVNPDLMPDL
                     TDDELVELMTRMVWTRVLDQRSISLNRQGRLGFYAPTAGQEASQLASHYALEKHDYIL
                     PGYRDVPQLIWHGLPLTKAFLFSRGHFVGNQFPEDLNVLSPQIIIGAQIVQAAGVALG
                     LKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNNKFAISTPREKQSA
                     AETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIETMTYRYGPHTL
                     SGDDPTRYRTKELDGEWELKDPIVRFRTFLEGKGLWNEEKENAVIDQAKEEIKVAIKE
                     ADATPKQTVTDLLKNMYETPTAPIKEQLAIYEAKESK"
     gene            1488..2465
                     /locus_tag="U0308_002612"
     CDS             1488..2465
                     /locus_tag="U0308_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEM2317567.1"
                     /translation="MAQKTMIQAITDALAVELEKDENVLVFGEDVGKNGGVFRATEGL
                     QEKFGEDRVFDTPLAESGIGGLAIGLALEGFRPVPEIQFFGFVFEVMDSVAGQMARMR
                     YRTGGTRTAPITIRAPFGGGVHTPEMHADNLEGLMAQSPGLKVVIPSTPYDAKGLLIS
                     AIRDNDPVIFLEHMKLYRSFREEVPEGEYTVEIGKAAVRREGTDVSIITYGAMVQESM
                     KAAEALEKDGVSVEVIDLRTISPIDVETIIASVKKTNRAVVVQEAQKQAGIAANIVAE
                     INDHAILSLEAPVMRVAAPDSVFPFSQAETVWLPNHNDIIERVKEVIAF"
     gene            2576..4210
                     /locus_tag="U0308_002613"
     CDS             2576..4210
                     /locus_tag="U0308_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HEM2317568.1"
                     /translation="MAYSFKLPDIGEGIHEGEIVKWFVQPGDKIEEDESLFEVQNDKS
                     VEEITSPVSGTIKEIKVAEGTVATVGQVLVTFDGVEGHEDDAEEESAAPKAESTESTP
                     APAQASGKGIFEFKLPDIGEGIHEGEIVKWFIQPGDKVEEDQSIFEVQNDKSVEEITS
                     PVDGTVKDILVSEGTVATVGQVLVTFEGDFEGEASHESTPESPAEEAELTNNDATSAP
                     VTGGNGTPSSKKDPNGLVIAMPSVRKYAREKGVNIAEVAGSGKNNRVVKADIDAFLNG
                     EQPAASTTTAQTEEKAAAPKAEKAAAKQPVASSDAYPETREKLTPTRRAIAKAMVNSK
                     HTAPHVTLMDEIEVTALMAHRKRFKEVAAEKGIKLTFLPYMVKALVATLRDFPVLNTT
                     LDDATEELVYKHYFNVGIAADTDHGLYVPVIKNADKKSVFQISDEINELAGKARDGKL
                     TADEMRHGSATISNIGSAGGQWFTPVINYPEVAILGVGRIAQKPIVKDGEIVAAPVLA
                     LSLSFDHRVIDGATAQKAMNNIKRLLNDPELLLMEV"
     gene            4215..5618
                     /gene="lpdA"
                     /locus_tag="U0308_002614"
     CDS             4215..5618
                     /gene="lpdA"
                     /locus_tag="U0308_002614"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEM2317569.1"
                     /translation="MVVGDFPEERDTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYG
                     GVCLNVGCIPSKALITIGHRFKEAGHSDNMGITADNVNLDFTKAQEWKGGVVNKLTSG
                     VKGLLKKNKVEMLEGEAFFVDDHSLRVIHPDSAQTYTFNNVIIATGSRPIEIPGFKYG
                     KRVLSSTGALALTEVPKKLVVIGGGYIGTELGGAFANLGTELTILEGGPEILPTYEKD
                     MVSLVKRNLKSKNVEMVTKALAKSAEETENGVKVTYEANGETKTIEADYVLVTVGRRP
                     NTDEIGLEQAGVKVTERGLVEVDKQGRSNVPNIFAIGDIVPGVPLAHKASYEAKIAAE
                     AIAGEKAENDYTALPAVVFSDPELATVGLTEKEAKEKGFDVKAAKFPFGGNGRALSLD
                     APEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGLAIESGITAEDIALTIHAHPSLG
                     ELTMEAAELALGRPIHM"
BASE COUNT         1908 a         1095 c         1180 g         1496 t
ORIGIN      
        1 agtaaaacag aaataacttt taactaaaag gaaagttcct gattttttat gaaacattgt
       61 gaaagaatga atattttttc acaaactctc ttaaaaccca tgttttcaat gaggattttg
      121 tggtaataac tggagaggct acgtaattgg ttaataggaa tttagaaaaa agcttccgga
      181 atctgcttct ttctatagaa tgacttttct ttttactacg ctattataat taatacacaa
      241 tcaggatggc agttttaaaa gaatccattt agatgggtaa atgaccggac gagcgttaca
      301 taaaacgcat acctaactaa tgaagaattt gaaactgtac aatgtgaatg acgaaagggt
      361 ggatacgaaa tggcttctaa aacaaagaag gctattatcg acgtaaagaa acaatttgag
      421 gctgttcata aacaatttga attagttcaa attttgaatg aaaaaggaga aatcgttaat
      481 ccagatttaa tgccggattt aactgatgac gagttagtag aattaatgac tcgcatggtt
      541 tggactcgtg tacttgacca acgttctatc tcacttaacc gtcaaggacg tctaggtttc
      601 tacgctccaa ctgctggaca agaagcttcc caacttgcaa gccactacgc acttgaaaaa
      661 catgactata ttcttccggg ttaccgtgat gtgccacaac ttatctggca cggacttcca
      721 cttacaaaag cgttcttgtt ctctcgtgga cactttgtag gtaaccaatt ccctgaagat
      781 ttaaatgtat tatcaccaca aatcatcatc ggtgcacaaa tcgtgcaagc tgccggtgtt
      841 gctctaggac ttaaaaaacg taaaaaagat gctgttgtaa tcacttatac aggtgatggt
      901 ggttcttccc aaggtgactt ctatgaagga atgaactttg caggtgctta ccatgctcca
      961 gcaatcttcg tagtacaaaa taacaaattc gcgatttcta cacctcgtga aaaacaatca
     1021 gctgctgaaa cattagctca aaaagcagtt gcagccggaa tcccaggcgt acaagtagac
     1081 ggaatggatc cacttgcagt atatgctgta actaaattcg ctcgtgaacg tgcagttgct
     1141 ggtgaaggcc caacattaat cgaaacaatg acttaccgtt atggtccaca tacactttct
     1201 ggtgatgatc caactcgtta ccgtacaaaa gaacttgacg gagaatggga acttaaagac
     1261 ccaatcgttc gcttccgtac tttcttagaa ggtaaaggcc tttggaacga agaaaaagaa
     1321 aatgctgtta tcgatcaagc aaaagaagaa atcaaagtag caattaaaga agcagatgct
     1381 acaccaaaac aaactgtaac tgatcttctt aaaaatatgt acgaaacacc aactgctcct
     1441 atcaaagagc aactggcaat ctatgaagcg aaggagtcga aataatcatg gcgcaaaaaa
     1501 caatgattca agcgattaca gatgcgcttg cagtagaact tgaaaaagac gaaaacgtat
     1561 tagtttttgg ggaagacgtt ggtaaaaacg gcggagtatt ccgtgcaaca gaaggattac
     1621 aagaaaaatt tggcgaagat cgtgtattcg atactcctct agcagaatct ggtatcggtg
     1681 gtcttgcgat tggtcttgca cttgaaggtt tccgtccagt tccagaaatt caattcttcg
     1741 gtttcgtatt tgaagtaatg gattccgttg ctggtcaaat ggctcgtatg cgttatcgta
     1801 caggcggaac tcgtactgct ccaattacaa ttcgcgcacc ttttggtggt ggagttcata
     1861 caccagaaat gcatgcggat aacttagaag gattaatggc tcaatcacct ggtttaaaag
     1921 tggtaattcc atccactcca tatgatgcaa aaggtctttt aatctcagct attcgtgata
     1981 acgatccagt tatcttctta gaacatatga aattataccg ttctttccgt gaagaagttc
     2041 cagaaggcga atacacagta gaaattggta aagcagctgt tcgtcgtgaa ggtacggatg
     2101 tttctatcat cacttacggt gcaatggtac aagaatcaat gaaagcagca gaagcgcttg
     2161 aaaaagatgg cgtatctgta gaagttatcg atttacgtac aattagccca attgatgtgg
     2221 aaacaatcat tgcttccgtt aagaaaacaa accgcgcagt tgtagttcaa gaagcgcaaa
     2281 aacaagcagg tattgcagct aatatcgttg ctgaaatcaa cgaccatgca atcctttctc
     2341 ttgaagctcc agttatgcgt gttgctgctc cagatagcgt attcccgttc tctcaagcag
     2401 aaacagtttg gttacctaac cacaacgata tcatcgaacg tgtaaaagaa gttattgcat
     2461 tttaatttat aatgaccgtt ttaaaactta tggggagttt tagaagggga aagaaatatt
     2521 tttatactaa ggttcagttt atctgaacct tagaaattac aggaggctta ataaaatggc
     2581 atattcattt aaattaccgg atatcggtga aggtatccat gaaggtgaaa tcgttaaatg
     2641 gtttgtacaa ccaggcgata agattgaaga agatgaatcc ctatttgaag tacaaaacga
     2701 caaatcagtg gaagaaatca cttctccagt ttcaggaacg attaaagaaa tcaaagttgc
     2761 agaaggtaca gttgctacag ttggacaagt actagtaaca tttgatggcg tagaaggtca
     2821 cgaagacgac gccgaagaag aaagcgcagc accaaaagca gaatccacag aatcaactcc
     2881 tgcacccgca caagctagcg gaaaaggaat ttttgaattc aaattaccag atattggtga
     2941 aggaattcat gaaggtgaaa ttgttaaatg gtttattcaa ccgggcgata aagtagaaga
     3001 agatcagtcc atttttgaag tacaaaacga caaatctgtc gaagaaatta cttctccagt
     3061 agatggaact gttaaagata ttttagttag cgaaggaaca gtagcaacag ttggtcaagt
     3121 attagtaaca ttcgaaggcg attttgaagg agaagctagt catgaatcta ctccagaatc
     3181 tccagcagaa gaagctgaac ttacaaacaa cgatgcaact tccgctccag ttacaggtgg
     3241 aaacggaacg ccatcatcta aaaaagatcc taatggcctt gtaattgcaa tgccttctgt
     3301 acgtaaatat gcgcgtgaaa aaggcgttaa tatcgctgaa gtagcaggct ctggaaaaaa
     3361 taaccgcgta gttaaagctg atattgatgc tttcctaaac ggcgaacaac cagctgcatc
     3421 aacaactact gctcaaacag aagaaaaagc agcagcacca aaggcagaaa aagcagcagc
     3481 aaaacaacca gttgcaagct ccgatgctta cccagaaaca cgcgaaaaat taacaccaac
     3541 tcgtcgtgcg attgcaaaag caatggtaaa ttcaaaacat acagctccac acgttacttt
     3601 aatggacgaa atcgaagtaa ctgcacttat ggctcaccgc aaacgtttca aagaagtggc
     3661 tgccgaaaaa ggtatcaaac taactttctt accttatatg gtgaaagctc ttgttgcaac
     3721 gcttcgtgac ttcccagtgc ttaacacaac tttagatgat gcgacagaag aacttgttta
     3781 caaacattac ttcaacgttg gtatcgcagc agatacagac cacggtttat atgtaccagt
     3841 aattaaaaat gctgataaaa aatccgtatt ccaaatttct gatgaaatca acgaactagc
     3901 tggaaaagca cgtgatggta aattaactgc tgacgaaatg cgccacggtt ccgcaactat
     3961 ttctaatatc ggttctgccg gcggacaatg gttcactcca gtaattaatt acccagaagt
     4021 tgctattcta ggtgttggtc gtattgctca aaaacctatc gtaaaagatg gcgaaattgt
     4081 agcagcacca gtacttgctc tttccttgag ctttgaccac cgtgtaattg acggcgcaac
     4141 tgctcaaaaa gcaatgaaca atattaaacg tttattaaac gatccagaat tattactaat
     4201 ggaggtgtaa caaaatggta gtaggcgatt ttccagaaga aagagacacc atagtcatcg
     4261 gtgcaggccc aggtgggtat gtagccgcaa tccgagctgc acaactcgga caaaaagtta
     4321 ccattattga aaaagaatat tacggcggtg tgtgcttaaa cgtgggatgt attccttcca
     4381 aagcacttat cacaatcggt caccgtttta aagaagctgg acactctgat aacatgggta
     4441 ttacagcaga caacgtgaac ttagatttca caaaagcaca agaatggaaa ggcggcgtag
     4501 ttaacaagct tacatcaggt gttaaaggcc ttcttaagaa aaataaagtt gaaatgttag
     4561 aaggagaagc gttcttcgtg gatgatcatt ccttacgtgt gattcaccct gactccgctc
     4621 aaacttatac atttaacaac gtaatcattg caacaggatc tcgtccaatc gaaatcccag
     4681 gtttcaaata tggtaaacgt gtattaagct caactggtgc acttgcacta acagaagttc
     4741 cgaaaaaatt agtcgtaatt ggcggcggat atatcggaac agaactaggt ggagcattcg
     4801 ctaaccttgg tacagaacta actatccttg aaggtggtcc agaaatctta ccaacatacg
     4861 aaaaagacat ggtttcccta gttaaacgta atctgaaaag caaaaacgtt gaaatggtta
     4921 ctaaagcact tgcaaaatct gctgaagaaa ctgaaaacgg cgttaaagta acgtatgaag
     4981 ctaacggtga aactaaaact atcgaagctg attatgtttt agtgacagta ggtcgtcgcc
     5041 caaatacaga cgaaatcggt ttagaacaag ctggcgttaa agtaacagaa cgcggtttag
     5101 tagaagttga caaacaaggt cgctcgaacg ttcctaacat tttcgcaatt ggtgacatcg
     5161 ttcctggtgt tcctctagct cacaaagcta gctatgaagc aaaaatcgct gctgaagcaa
     5221 ttgctggcga aaaagcagaa aacgattata cagcacttcc agctgttgtt ttcagtgacc
     5281 cagaacttgc aacagttggt ttaacagaaa aagaagcaaa agaaaaaggc tttgatgtaa
     5341 aagctgctaa attcccattc ggcggtaacg gtcgtgcgct ttctttagat gcacctgaag
     5401 gatttgttcg tctagttact cgtaaagaag atggcctagt tatcggtgca caagttgccg
     5461 gaatgaacgc ttctgatatt atttcagaaa tcggcttagc aatcgaatca ggtattacag
     5521 ctgaagacat cgcgcttact atccatgctc atccatccct tggagagctt acaatggaag
     5581 cagctgaact tgctttaggt cgtccaattc acatgtaatc aacttaaagc ggaggtatcc
     5641 tttatggata tttccgcttt ttatctatat aaattagtg
//
LOCUS       DASDYK010000139         5635 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.139, whole genome shotgun sequence.
ACCESSION   DASDYK010000139 DASDYK010000000
VERSION     DASDYK010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5635)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5635)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5635
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.139"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..1279)
                     /locus_tag="U0308_002615"
     CDS             complement(<1..1279)
                     /locus_tag="U0308_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEM2317570.1"
                     /translation="MTLNSYEEALDWIHGTLRLGIKPGLARMEYMMEKLNHPEKANKW
                     VHIAGTNGKGSTLTFVRNALEEAGYRTGTFTSPYIEVFNERISINGEPISDEMIVSLA
                     NRIKPIAEELEKTIYGPPSEFEIITAMMFLCFAEYVSIDIGIIEVGLGGRLDSTNILV
                     PLISVITTIGMDHMEFLGDTIEQIASEKAGIIKPGIPVVSGAIQKEAQEVIAKIAKKN
                     KSNVAQLNETFFMHNENGNITYKTIYGEEISNLSIGLLGLHQLNNAAVAIKVLQYLNT
                     FSTFEIGLAAIKKGLEKAFWPGRMEKIISNPFIMLDGAHNPEGIKTFAHSIQKYSGPK
                     KIIVSILADKNYQEMLGMLKSIPNTEIILTTFDYPRAMMAEEVIQIGKNEGISLNPDW
                     QQVLGNLYETETNTKIFITGSLYFISEVRKYLLA"
     gene            complement(1341..3992)
                     /locus_tag="U0308_002616"
     CDS             complement(1341..3992)
                     /locus_tag="U0308_002616"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEM2317571.1"
                     /translation="MTIEHNEINMPTKYEPSNVEAGKYKWWLEKEFFKAEGNTDKKPY
                     SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAKVEAK
                     LKESNVSRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSDA
                     VKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKYPLTDGSGY
                     LEVATTRPETIPGDTAVAVHPKDERYQHLIGKTIMLPILNREIPIVADEYVEREFGSG
                     AVKITPAHDPNDFEVGNRHELPRIIVMHEDGTMNKNAGKYDGLDRFVARKEIIQDFKD
                     LGLFIKQEPHLHSVGHSERTGAVVEPYLSLQWFVKMEPLAAEALELQKTENKVNFVPA
                     RFEKTYETWMDNIHDWCISRQLWWGHRIPAWYHKETGEIYVGESEPENLSEWEQDEDV
                     LDTWFSSALWPFSTMGWPDTENPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGE
                     RPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKF
                     SYEKVESTWNFINKIWNASRFVLMNLDGMKYNEIDLSNVTEVSDKWILTRLNETIQAV
                     TSLGEKYEFGEVGRTLYNFIWDDFCDWYIEIAKIPLYGEDEVAKQTTRSVLAYTLNAT
                     MRLLHPFMPFVTEEIWQNLPHEGESITIAEWPKVNEQQIDTKSSTAMATLVEVIRAVR
                     NIRSEVNTPLSKPIVLEIKPKDTTYKEILEQNISYIERFCNPEQVTISFDVEASKTAM
                     TAVVSGAEIFIPLEALIDLNVEIARLEKELEKWNKEVARVQGKLNNERFISKAPESVV
                     AEERLKEKDYLDKKASVLERIETLKEV"
     misc_binding    complement(4041..4268)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            complement(4316..5605)
                     /gene="hemL"
                     /locus_tag="U0308_002617"
     CDS             complement(4316..5605)
                     /gene="hemL"
                     /locus_tag="U0308_002617"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEM2317572.1"
                     /translation="MQNYSKSEKAFKEAKKVLPGGVNSPVRAFNSVDASPVFMDHGKG
                     AYITDVDGNEYIDYVLSWGPLILGHADPAVVNAITKAALKGTSFGTPTEIETELAKLV
                     IERVPSIEIVRMVSSGTEATMSAIRLARGYTKREKILKFEGSYHGHGDSLLIKAGSGV
                     ATLGLPDSPGVTKGLAADTITVPYNDIEGAELAFQKYGEEIAAVIVEPVAGNMGVVPP
                     IDGFLEGLRELTTKFGSLLIFDEVMTGFRVDYYSAQGYYVVTPDLTCLGKVIGGGLPV
                     GAYGGKKEIMEQIAPAGSIYQAGTLSGNPLAMNAGFETVRQLTPQHYDVFRTLIKRME
                     EGLTEISARRQVPLSINKAGSMFGFFFTDQKVINFDTAKTSNLEFFRNYYREMLGQGI
                     FLPPSQFEGVFISTMHTEKEIDKTLEAFDTTCKILRG"
BASE COUNT         1663 a         1191 c          865 g         1916 t
ORIGIN      
        1 aggccaacaa atatttccgc acttctgaaa tgaaataaag cgatcctgta ataaagattt
       61 tcgtattagt ctccgtttcg taaagattac ctaatacttg ctgccaatct gggttcaaag
      121 aaataccttc attttttcct atttgtatta cttcttccgc catcatagct ctaggataat
      181 caaaagtagt tagtattatt tctgtattgg gaatggactt taacattcct aacatttctt
      241 gatagttttt atcagctaat atactcacga ttattttctt aggcccagaa tacttttgga
      301 tggaatgagc gaatgtttta ataccttctg gattatgcgc tccatccagc ataataaatg
      361 gatttgaaat gattttctcc attcttcctg gccaaaatgc tttttccaag ccttttttaa
      421 ttgccgccaa accaatttca aaggtagaaa atgtatttaa gtactgtaat actttaatag
      481 ctaccgccgc attattcaat tgatgaagac caagcagccc aatggaaaga ttgcttattt
      541 cttctccata tatagtttta taagttatat ttccattttc attatgcatg aaaaaagtct
      601 catttaattg agcaacattg gatttattct tttttgctat cttagctata acttcttgag
      661 cttctttttg tatagcacct gaaacaactg gtattcctgg cttaattatg ccagcttttt
      721 cactagcaat ttgctcgatt gtatccccaa ggaattccat atgatccatc ccaatcgtgg
      781 taattacaga aattagtggc actagaatat tcgtagagtc cagtcttccg cctagtccta
      841 cttcgataat accaatatca atggaaacat attccgcaaa gcataaaaac atcatagctg
      901 taataatttc aaattctgaa ggtggtccat aaatagtttt ttctagctct tccgcaatag
      961 gtttaattcg gttagctaat gaaacgatca tttcatcgct aatcggttca ccattaatac
     1021 taattcgttc attaaaaact tcaatgtatg gtgaagtgaa ggttcccgtt ctatatccag
     1081 cttcttctag agcatttcta acaaaagtaa gtgttgagcc ttttccattt gttccagcaa
     1141 tatgtaccca cttattcgct ttttccggat gatttagctt ttccatcata tactccatac
     1201 gagctagtcc aggctttatt cctagacgaa gcgttccgtg aatccaatct aatgcttctt
     1261 catacgaatt taatgtcatt atttaaacca ccttaaaact gaccctacca gttgatttca
     1321 tgataaggtc agttcgtttt ttatacttct tttaacgttt caattctttc aagaacagag
     1381 gcttttttat ctagataatc tttttctttt agacgctctt ctgcaactac actctcagga
     1441 gctttgctaa tgaatcgctc attgtttagt ttcccttgaa ctcttgccac ttctttattc
     1501 catttttcta gttctttttc aagtcgagca atctctacat ttaaatcaat taacgcctct
     1561 aaaggaatga aaatctctgc tccagatact acagcagtca tcgccgtttt agatgcttca
     1621 acatcgaagg aaattgtcac ttgttcaggg ttacaaaaac gttcaatata agaaatattt
     1681 tgttctagaa tttctttata cgtagtatct ttcggtttaa tttcaagaac aattggctta
     1741 ctaagaggcg tattcacttc agatcgaata ttccggacag cacgaatcac ttcaactaaa
     1801 gtagccatgg ccgtagaaga tttagtatca atctgttgtt cattcacttt tggccattca
     1861 gcaattgtaa tagattcccc ttcgtgaggt aaattttgcc aaatttcttc tgttacaaaa
     1921 ggcatgaatg gatgaagtaa tcgcatagtc gcattcaaag tatacgcaag tacagatcta
     1981 gttgtttgtt ttgctacttc atcttctccg taaagaggta ttttcgcaat ctctatatac
     2041 caatcacaga aatcatccca gataaagtta tataacgttc gtcccacttc accaaattca
     2101 tatttttcac ctaaggaggt aaccgcttga attgtttcat taagtctagt caatatccat
     2161 ttatcactaa cttcagtaac attagacaaa tcaatttcat tatatttcat cccatctaaa
     2221 ttcattaaca caaaacggga tgcattccaa atcttattaa tgaaattcca agtagactct
     2281 actttttcat agctgaattt caaatcttga cctggtgatg aacctgttgc aagtgtataa
     2341 cgaagagaat ctgctccata tttgtcaata acttcaattg ggtccacacc attaccaagc
     2401 gacttagaca ttttacgtcc ttcagagtca cgcactaaac catgaatcaa tgtatcttta
     2461 aaaggtctct caccagtaaa ttcaacagat tggaaaatca ttctagatac ccaaaagaaa
     2521 ataatatcat atccagttac taaagtatta gttgggaaga aatgttggaa atctggattc
     2581 tcagtatctg gccagcccat tgttgaaaat ggccataaag ccgaactaaa ccaagtatct
     2641 agtacatctt catcttgttc ccattcagaa aggttttcag gttcgctttc accaacataa
     2701 atttcacctg tttctttatg ataccaagcc gggattctgt gaccccacca taattgacgc
     2761 gaaatacacc aatcgtgaat gttatccatc caagtttcat atgttttttc aaatctagct
     2821 ggtacaaaat tcactttgtt ttccgttttt tgaagttcca gtgcttctgc agcaagaggt
     2881 tccattttca caaaccattg tagtgaaaga tagggttcta ctaccgctcc agttcgctct
     2941 gaatgcccca ctgaatgcaa gtgaggttct tgtttgataa ataaacctaa gtctttgaaa
     3001 tcttgaataa tttcttttct agctacaaaa cggtccaaac catcatattt accagcattt
     3061 ttattcattg tcccatcttc atgcatgaca ataattcttg gcaactcatg acgattccct
     3121 acttcaaaat cattcggatc atgtgcaggc gtaattttaa ctgcaccaga gccaaactct
     3181 ctttccacat attcatcagc aacaatagga atttctctat tcaaaatcgg tagcatgatg
     3241 gttttaccaa ttaagtgttg atatctttca tcttttgggt gaaccgcaac agctgtatca
     3301 cccggtattg tttcaggacg tgttgtagct acttctaggt aaccagagcc atcagttaat
     3361 ggatatttca aatgatagaa actgccttca atatctttat gaattacttc aatatcagat
     3421 aaagccgttt tcgcttctgg gtcccagttt attatatatt ggccgcgata aataagacct
     3481 ttattatata atgttacgaa tacttttttt acggcatccg ataaaccatc atctagtgta
     3541 aatcgttctc ttgagtagtc taaaccaagg cctaacttct cccattgttc acgaataaac
     3601 tcagcgtatt cttctttcca ttcccaagtc ttatccacaa agttttctcg tcctaagtca
     3661 taacgagaaa cattagattc ttttaatttc gcttctactt tagcttgcgt tgcaatacca
     3721 gcatgatcca ttcctggtaa atataaagtg tcaaaccctt gcattctttt cattcgagta
     3781 ataatatctt gtaaagttgt atcccacgca tggcctaaat gtagtttacc tgttacgttt
     3841 ggtggtggaa taacaatact gtaaggtttt ttatccgtat ttccttctgc tttaaagaat
     3901 tctttttcta gccaccattt atatttacct gcttctacgt tactcggctc atattttgta
     3961 ggcatattta tttcattgtg ttcgattgtc ataatgattc ctcctttttt aggcaaaata
     4021 aaaaactctt ctcatcctca taaaaggacg aaaagagtat tattcgcggt accacctttt
     4081 tacccacaga aaaaaattgc aggcacttca ttgtgttaac gatagagaaa tctaccggtt
     4141 attccttact ataaattcag gaatactgct ccaaggctac cttcagacat catttttgaa
     4201 agcttgcacc aaccgctttc tctctttaaa aaaataaatg tcctactctt cctcttcatt
     4261 gcatttgatt ctatatacta gaaataattt taacaaaagt ttcaagattc gtcaattagc
     4321 cgcgaagtat tttgcatgtc gtatcaaatg cttccaaggt cttatcaatt tctttctcgg
     4381 tgtgcatcgt agaaatgaag acaccctcaa actgagacgg tggtaagaaa atgccttgac
     4441 ctaacatttc acggtaataa tttcggaaaa attctagatt acttgttttt gctgtatcaa
     4501 aattaatcac tttttgatca gtgaagaaaa agccgaacat cgaaccagcc ttattaatcg
     4561 agagcgggac ttgtcttcta gcagatatct ctgtaagtcc ttcttccatt cgcttaatta
     4621 gggtgcggaa aacatcatag tgttgcggcg ttagttggcg aactgtttca aagccagcat
     4681 tcattgctaa tggatttccg gataaagttc ccgcttgata aatagaacca gcaggagcaa
     4741 tctgttccat aatttctttc tttccaccat aagcaccaac tggtaaacca ccaccaatca
     4801 cttttcctaa acaagtaaga tcgggcgtta ccacataata gccttgagca gaatagtaat
     4861 ctactctaaa tccggtcata acttcatcaa aaatgagcaa ggagccaaat tttgtagtaa
     4921 gctctcgaag tccttctaaa aatccatcaa ttggaggaac aacacccata ttgcccgcga
     4981 ctggttcaac tatgactgct gctatttctt ctccatattt ttggaaggcc agttcggctc
     5041 cttcaatatc attgtatggg actgttattg tatctgccgc aagaccttta gtaactcctg
     5101 gagaatccgg taatccgagt gttgctaccc ctgaaccagc tttaattaat aaagaatctc
     5161 catgtccgtg ataacttcct tcaaatttca agattttttc tctttttgta taaccgcgag
     5221 ccaaacgaat agcactcatc gttgcttccg ttcctgatga aaccatacga acaatttcaa
     5281 tagatggcac acgttcaatt actaattttg ctaattcagt ttcaatctca gtaggcgtcc
     5341 caaagctggt acctttcaga gctgcttttg taatagcatt aacaacagct ggatcagcgt
     5401 gccctaaaat tagagggccc caagataaca cataatcaat atattcgtta ccatcaacat
     5461 ctgtaatata agcgcctttt ccgtggtcca taaaaactgg cgaggcatct acagagttga
     5521 atgctcgaac agggctattt acaccaccag gtaagacttt tttggcttct ttaaaggcct
     5581 tttcggattt cgaatagttt tgcaaatttc ttacctccta tttatttaaa tattt
//
LOCUS       DASDYK010000140         5582 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.140, whole genome shotgun sequence.
ACCESSION   DASDYK010000140 DASDYK010000000
VERSION     DASDYK010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5582
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.140"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..734
                     /locus_tag="U0308_002618"
     CDS             <1..734
                     /locus_tag="U0308_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317573.1"
                     /translation="DFYFKKLGNWNLIHSFLKGFWRAFFFLLLLLLIADLIVMKFVND
                     RYFIPVILLSLLCIPLLYYILIYSRAKKFIRTRYQLRSFAELTTMRRYLLYAYLEKSG
                     FSTRADLEKLIRFIHSEMAEEKKNYQPLSTVVGVFIAAFLAILGGTFLFLMDDVVERL
                     IAAVLIMVMAILLYIVGTFIMSIIRSKSENNTKKERVLTKEIIAIQTAMLVSENTSYH
                     PFLAMERKIAENDFLKEIITSRSFL"
     gene            770..1417
                     /locus_tag="U0308_002619"
     CDS             770..1417
                     /locus_tag="U0308_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2317574.1"
                     /translation="MTTKRKETRESVCYREIKKKIRNGELKPGDRLIENTLSQQLEIS
                     RTPIRKAIGMLAADGYVEYNDFRGAFVRDSIINKERYFEMTEIIGLFLKQAIQKIRTK
                     KIAFNKMRVVAKLVEIEREQPTDPATYFEYEKWFVSDLLTYMKNNYYLKISDDFFNNI
                     QEFGDEEVIKIAQNACVKTIANIQRFIDALDVQDYDKCIAIIDQVIDAHVLVAYR"
     gene            complement(1458..2447)
                     /locus_tag="U0308_002620"
     CDS             complement(1458..2447)
                     /locus_tag="U0308_002620"
                     /EC_number="1.3.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acryloyl-CoA reductase"
                     /protein_id="HEM2317575.1"
                     /translation="MKSFQALFIEKEADNTSLHFRETTIDNLPENEVTIEVHYSGINY
                     KDGLAVLPDGKIVSEYPFIPGIDASGVVVHSKSDQFQVGDEVIVTSYDFGVSYFGGYS
                     EFIRVPAAWVVPLPDGLSLKEAMILGTAGFTAALSVDALEFSGVTPDAGKIAVSGATG
                     GVGSLSSAILSKRGFSVVASSGKSDAKEFLEKFGVSEIVLREAFQPEKVRALDKQLYA
                     GAIDCVGGKPLSYLLTAVQYGGAVTTCGMSAGGKLDTTVFPFILRGIQLFGIDSVLCP
                     MPKRERIWNRLATDFKLTNLESLVTEVGFSELPEALHQVMNGGVTGRYLVKIK"
     gene            2626..3555
                     /locus_tag="U0308_002621"
     CDS             2626..3555
                     /locus_tag="U0308_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family lipid kinase"
                     /protein_id="HEM2317576.1"
                     /translation="MGKALLIVNPSSGKEKGKTYQGKTEEVLKKRYDEVEVRLTEKAG
                     DATEFASWAAEQGFEAVIAMGGDGTLNETINGLAIHEKRPDFGFIPLGTVNDLARSVG
                     IPLKPEKAIQALEKAIAVPMDIGRIGDQYFMNVLAIGMIAQAVDQVSVEQKTKFGSVA
                     YFLEGLKAFNRNELLHFKIEYDEEVWEGEAALVVAGLTNSVGGMESWAPDAKIDDGYL
                     HIIILTKLGLLDAANMIPQLIRGNLKNSDGVVYIKTKKLTIDASGDDLSINVDGDPGP
                     GVPAEIEVLGSHLNILAPKKSSKKRFGPFILKK"
     gene            3595..3927
                     /locus_tag="U0308_002622"
     CDS             3595..3927
                     /locus_tag="U0308_002622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317577.1"
                     /translation="MEEELEVIHKGLANAKNGFKAVPGKLYLTATYIVHKPNDYFDEE
                     INIPLNRVAKIRGVRTKILGKELLSNILEIDMISGVKYQFVVNKQKKWLEAVSEVLES
                     RGESEKLG"
     gene            complement(3965..4831)
                     /locus_tag="U0308_002623"
     CDS             complement(3965..4831)
                     /locus_tag="U0308_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM2317578.1"
                     /translation="MTILAFDLGGTAVKFGVLTTAGEILEKGKFKTPDNLDEMLQSLM
                     DVKANYDYTFQGAAFSCPGAVNNETGIIGGASAIPYIHNFPFKQLLEEKLGLPVTMEN
                     DANCAALAEVWIGAAKDKQDIIFMILGSGVGGAVIRGGKVHHGANLHGGEFGYMLMDR
                     DGRTLSELGTVVNAATRIAERLEVPKASIDGLRAFELRAEGNKIAKEELDTMFYYLAR
                     SIFNLQYALDPELVVIGGGVSERADFIQELTEYVAKVKASVPIATISPTVVGCHFGND
                     ANLIGATAFHLA"
     gene            4990..5373
                     /locus_tag="U0308_002624"
     CDS             4990..5373
                     /locus_tag="U0308_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317579.1"
                     /translation="MEIKVQKKLTDGRIAFSSEYGECVGIWADEDPEPSRVYTVEITI
                     PDMISAELLHESEEKHCALEIDEEGLVHVIGKLEDYEEDGFAVLRLEESIICFDTKFS
                     EEIEMLHGRFVEFVIPEIKLSNVGI"
BASE COUNT         1850 a         1011 c         1085 g         1636 t
ORIGIN      
        1 atgattttta ttttaaaaaa ttagggaact ggaatttaat acatagcttt ttgaaaggat
       61 tttggcgagc attttttttc ttgctactat tgttactaat tgctgatttg attgttatga
      121 aattcgtgaa tgatcgttat tttattccag ttattttatt aagtttatta tgtattcctc
      181 tcttatacta cattttgatt tacagtcgag ctaagaaatt catcagaaca cggtatcaat
      241 tgcggagttt tgctgaacta acaaccatgc gccgctattt attatatgct tatttagaaa
      301 aaagtggttt tagtacacga gctgatttgg aaaaattaat tcgttttatt cattctgaaa
      361 tggcagaaga aaagaaaaat tatcaaccac tcagtactgt tgtgggcgtt tttatagcag
      421 catttttagc aattttaggc ggtacatttc tatttttgat ggatgatgtg gtggagcggc
      481 ttatcgcagc ggttctaatc atggtaatgg caattttact ttatattgta ggcactttta
      541 ttatgtcgat aattcgctct aaatcagaaa ataatacgaa aaaagaacgg gtattaacaa
      601 aagaaattat agcaattcaa acggcaatgc ttgttagtga gaatactagt taccacccat
      661 ttttagcgat ggagagaaaa atagctgaaa acgatttttt gaaagagatt attacatcac
      721 gatccttttt ataaacacaa ggttatagac atatttagga ggcagaataa tgacaaccaa
      781 acgcaaagag actagagaaa gtgtttgtta tcgggaaatc aaaaagaaga ttagaaacgg
      841 ggaactaaag ccaggcgatc gtttaattga aaatacatta tcacaacaat tagaaattag
      901 tcgtacgccg attcgaaaag caatcgggat gcttgctgca gatggatatg tggaatacaa
      961 cgattttcga ggtgcttttg ttcgggacag cattattaat aaagaacgtt actttgaaat
     1021 gacagaaatt attggtttgt ttctaaaaca agctatccaa aaaatccgta caaaaaaaat
     1081 agccttcaat aaaatgcgag ttgttgcaaa attagtcgaa attgaacgcg aacaaccaac
     1141 cgacccagca acttatttcg aatatgaaaa atggtttgtg agtgatttac taacctatat
     1201 gaaaaataat tactatttga aaattagcga tgattttttt aataatattc aagaatttgg
     1261 tgatgaagaa gtcattaaga ttgcacaaaa cgcttgtgtt aaaacaatcg ctaacatcca
     1321 acgttttatt gatgcgttgg atgtacaaga ttatgacaag tgcatagcga ttattgatca
     1381 agtcattgat gcccatgttt tagtcgctta tcgttaaaaa agcattgtcc ttactactta
     1441 aggacaatgc tttttattta ttttattttc actaaatatc taccagtcac gccaccgttc
     1501 attacttggt gaagagcttc aggtaactca gaaaagccca cttctgttac taagctttct
     1561 aaattagtta atttgaaatc tgtcgcaagt ctattccaaa ttcgttctcg ttttggcatc
     1621 ggacataaaa ctgaatcaat accgaataat tgaataccac gcaaaataaa tggaaagaca
     1681 gttgtatcta attttccacc agcagacata ccgcatgtag taactgcccc gccatattga
     1741 acagctgtta ggaggtatga aagaggtttt ccaccaacac agtcaatggc cccggcgtat
     1801 agttgtttgt ctaatgcgcg cactttttca ggttgaaaag cttctcttaa aactatttca
     1861 gatacaccga atttttctag gaattccttt gcatcgcttt ttccagaaga agctacaaca
     1921 gagaagcctc gtttggaaag tatggctgag cttaaactac ctacaccgcc tgttgcacca
     1981 cttacagcga tttttccagc atcgggtgtt acgccactaa attcaagcgc atcgaccgag
     2041 agtgctgctg taaagcccgc tgtgcctagt atcatcgctt cttttaatga tagaccatct
     2101 ggcaaaggaa caacccaagc agctggaacg cgaataaact cactatatcc accaaaatag
     2161 ctcactccaa aatcataact agtgacaata acctcatcgc ctacttgaaa ttggtcagat
     2221 ttagaatgga cgaccacacc acttgcatca ataccaggaa taaaaggata ctcgctcaca
     2281 attttcccgt ctggaagtac agccagtcca tctttgtagt taataccaga ataatgtacc
     2341 tcaatcgtta cttcattttc tggcaagtta tctatagtag tttctctaaa atgaagggaa
     2401 gtattatctg cttctttttc aatgaaaagt gcttgaaatg atttcatttt ttaaattcct
     2461 ccacaactca attttgtgtt ccccttcact ttacgacttt tttcgccatt ttacaaggct
     2521 gtgactggta caaatcccca tttcaaggta aactagaata gagaagatgc cgatattttg
     2581 tgtaaattta taaatagaat tttttggcaa gaaagggtga gtgcgatggg gaaggcacta
     2641 ttgattgtga atccatcatc aggtaaagaa aaaggaaaaa cttatcaagg aaagacagaa
     2701 gaagtactaa aaaaacgtta tgatgaggtg gaagttcgcc tgactgaaaa agcaggggat
     2761 gcaacagaat ttgcttcctg ggctgctgaa caaggctttg aagcagtaat tgcgatgggc
     2821 ggagacggga ctttaaatga aaccataaac ggacttgcaa tccatgaaaa acgacctgac
     2881 tttggcttca ttccacttgg aacagtcaat gatttggctc gttcggtagg tataccatta
     2941 aaacccgaaa aagcgattca agcattagaa aaagctattg cagtgccgat ggatattggc
     3001 cggattggcg accaatactt tatgaacgtc ctagctatcg gtatgattgc gcaagctgtc
     3061 gaccaagtta gcgtcgaaca aaaaaccaaa tttggctccg tagcatactt tttagagggc
     3121 ctgaaagcat ttaaccgcaa tgaattactt cattttaaaa tcgaatatga cgaggaagtt
     3181 tgggaagggg aagctgcgct agttgtggct ggcttaacta attcagttgg tgggatggaa
     3241 tcatgggcgc cagatgcaaa aattgacgat ggctacctgc atattattat tctaacgaaa
     3301 cttggcttgc ttgatgcagc caatatgatc ccgcaattaa ttcgcggtaa tttaaaaaac
     3361 agtgacggtg tagtttatat taaaaccaag aaacttacca ttgatgcaag tggagacgat
     3421 ttaagcatca acgtcgatgg cgacccaggt ccaggtgtac cagcagaaat cgaagtgctt
     3481 ggcagtcact tgaatatcct tgcacccaaa aaaagcagca agaagcgctt cggcccattc
     3541 atacttaaaa agtaacctac aataattgta gaagaataag gagatgaaag ctttatggaa
     3601 gaagaattag aagtcattca taaaggtctt gccaatgcga aaaatggttt taaagcagtc
     3661 cccggaaaac tttatttaac agcaacgtat attgtccaca aaccaaatga ttactttgac
     3721 gaagaaatca atattccgct gaatcgagta gcaaaaattc ggggtgtccg caccaaaatc
     3781 cttggaaaag aattactctc caacatttta gaaatagaca tgatatccgg agtaaagtac
     3841 caattcgttg taaacaaaca gaaaaagtgg ctggaagcag tttctgaagt attagaaagc
     3901 cgcggtgaat cagaaaaatt aggatagaaa gaagctggca cgaaaaaagt gaccagcttc
     3961 ttttttatgc taaatgaaat gcagttgcac caatgagatt ggcatcattt ccaaagtgac
     4021 agccaacaac agtagggcta atagtcgcaa ttggtacaga cgcttttact ttcgccacat
     4081 attcggtcaa ctcttgaata aaatcagccc gctcacttac accaccacca atgacgacta
     4141 gttcaggatc aagtgcgtac tgcaaattaa atatacttct cgcaagataa taaaacatcg
     4201 tatctagctc ttcttttgcg attttatttc cttccgcacg taattcaaat gcccgaagac
     4261 cgtctatact agcttttgga acttctaaac gctcggctat tctcgtcgca gcatttacga
     4321 ctgtaccaag ctcgctaagt gtgcgtccgt cgcggtccat caacatataa ccaaattcac
     4381 caccatgcaa attggccccg tgatgtacct tgccaccgcg aataactgcg ccaccaactc
     4441 cacttccaag aatcataaaa ataatatctt gcttgtcttt cgccgcgcca atccaaacct
     4501 ctgctaaagc tgcacagttg gcgtcatttt ccatcgtaac aggaagcccc agtttttctt
     4561 caagtaattg tttaaaaggg aaattatgta tgtaggggat ggcactcgcg ccgccaatga
     4621 taccggtttc attattaacc gcacctggac aactaaacgc agctccttgg aatgtataat
     4681 cgtaatttgc ttttacatcc ataagcgatt gcagcatttc atccaaatta tccggggttt
     4741 tgaatttacc tttttctaga atttctccag ctgttgttaa cacgccaaac ttcactgctg
     4801 ttccacctaa atcaaatgca agtatcgtca ttacccaatc tcctttttaa tagaaaagta
     4861 tatacttatc atacttttaa acaatacaaa tgacaaataa aaagtgaaaa tactttgcta
     4921 aaaattaacg tccttttcta ttttgtgcta taataaagca agaatttgaa gcgcaggagg
     4981 aaatggttag tggagataaa ggttcaaaag aaattgactg acggcagaat cgcttttagt
     5041 agtgaatatg gtgaatgcgt tggtatatgg gccgatgaag acccagaacc aagtagggtt
     5101 tacacagtag aaattacaat accggacatg attagcgcag aactgctaca cgagagtgaa
     5161 gagaaacatt gtgcattaga aatagacgaa gaaggcttag ttcacgtaat tgggaagtta
     5221 gaggattacg aggaagatgg ctttgcagtg ctccgcttag aagaaagtat tatttgtttt
     5281 gacacgaaat tcagtgaaga aatcgaaatg ctccatggaa gatttgttga atttgttatt
     5341 ccggaaataa aattaagtaa tgttggtata tagattgaaa tgaaagaggc aggaaacaga
     5401 tagtgagagt ttcctgtctt ttttttgtta tttggaagga gtgcttgaat aattattcat
     5461 tcgtgaatta taattaatgt gaaataataa aacaaatagg tagtaattag cggttaaata
     5521 gttattttat agtagtaaat acgaattttt tgtgacgaag aaaaattgat tgcataaaaa
     5581 gt
//
LOCUS       DASDYK010000141         5565 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.141, whole genome shotgun sequence.
ACCESSION   DASDYK010000141 DASDYK010000000
VERSION     DASDYK010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5565
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.141"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..701)
                     /locus_tag="U0308_002625"
     CDS             complement(<1..701)
                     /locus_tag="U0308_002625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317580.1"
                     /translation="MKKSNVFLLITLLVGLVFISFGCSEEKETPKKTAKEVQGVQIKT
                     KEFQRVVGWLSKDSVLLQTKKSGVTYFEELNIYNEKKRPIFNTKESISEVQISPDYRN
                     ILLYSAESAEKATMRIIALNDGSTVASRSTKPLTTTFYWNDESPEKIMFVSYSPEWNF
                     QIENWDYTLNQLHKIDVASPFISWYGDNLVISNNKDKPDDELGNLYLQDIRDNATKNL
                     IVANIMQFAVHDNVLL"
     gene            complement(847..1815)
                     /locus_tag="U0308_002626"
     CDS             complement(847..1815)
                     /locus_tag="U0308_002626"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family glucokinase"
                     /protein_id="HEM2317581.1"
                     /translation="MNKKLIGVDLGGTTAKLAILTKEGDIEEKWTIDTNIEDKGAHIV
                     KNIGDSINQKLTDLQLDNDIFYGIGMGTPGTVNYETGTVKGAYNLGWADEQNVSQDLE
                     NITGLKIILDNDANVAALGERWKGAGEGGANVVFVTLGTGVGGGIFAEGKILHGIRGA
                     AGEIGHVTVVPENGYDCTCGKKGCLETVASATGIVRVAKDLAKEYTGKSALKDAINND
                     ETITSKLIFELGAEDDALANETIDKISFYLALALSHIGNMLNPEKIIIGGGVSAAGDQ
                     LLTPVKTYFETMVFPAVKESTKLSIATKGNDAGIIGAAWLALPSED"
     gene            complement(1840..2052)
                     /locus_tag="U0308_002627"
     CDS             complement(1840..2052)
                     /locus_tag="U0308_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgQ family protein"
                     /protein_id="HEM2317582.1"
                     /translation="MKTVYDVAQLLRKHGIIVYLGKRQYDIEMMEYEITELFKHNILD
                     RETFARARSILKQELIKEQRKNSSLN"
     gene            complement(2065..3603)
                     /locus_tag="U0308_002628"
     CDS             complement(2065..3603)
                     /locus_tag="U0308_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEM2317583.1"
                     /translation="MSFQEQYVFWRLTNYFLGVEKYRLIHLHEEKQELWLENTSQKKR
                     PVIRIQMKELSWANVVERDVTHTLHVTENLRKQMGRLKLPLVNIYITPFEPMGDISPF
                     FGQSIASPNEKVKLENILLANEQMRDHLDTLVKTLELPEEAFVLPNEITKELVAKERE
                     QVIAYITTKVNEEQKVARNSKPIVTYTFIGLLVVAFLWLSFQGGTTNSFNLIKWGGKF
                     NPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC
                     GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDV
                     FSSQIDIAGHIGGLVGGFLLAGALSLPKQFFHWRRLAYGISLFGVAVLFLYFGYQKGE
                     QPYDPMQANVAVQQYLQEQNKKEATKITDNLISSGSADGYSYTYAASIALQDKQIDKA
                     ETMAKEAINIDKDIPEAHYYLSVCYRVKGDMPNAIKEANSARELSSNPFFDSYYDELE
                     KIKE"
     gene            complement(3702..4241)
                     /locus_tag="U0308_002629"
     CDS             complement(3702..4241)
                     /locus_tag="U0308_002629"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEM2317584.1"
                     /translation="MEDKRLIREKILRNLNSLDRVEHRERSIRLAEKLFLLPEWENAK
                     VVGITLARHPEIETEAIILQAKKEGKTILIPKTYYPSKKMEFKKMDSIHPLIKSKFGI
                     LEPNELAETVDKKVIDLLIVPGVAFNKDHYRIGFGGGFYDRFLTDFQGHTVSLYLYEQ
                     QIEFTPEKHDEPVSILIGG"
     gene            complement(4297..4446)
                     /gene="rpmG"
                     /locus_tag="U0308_002630"
     CDS             complement(4297..4446)
                     /gene="rpmG"
                     /locus_tag="U0308_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEM2317585.1"
                     /translation="MRVNITLECTECGDRNYITTKNKRENPERIELKKYCPRLRRVTL
                     HRETK"
     gene            4644..5000
                     /locus_tag="U0308_002631"
     CDS             4644..5000
                     /locus_tag="U0308_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317586.1"
                     /translation="MTTVIIILLIAAIALFVISFLQKGDNKQLEKELEDVAAQWMQEN
                     FELKQRISELEKAMKMDSPSIEAEQVPDSPKVRELMKKQVITLYTSGIVTSEIAEQSS
                     LPKEEVEKIIEEYLKH"
     gene            5028..5507
                     /locus_tag="U0308_002632"
     CDS             5028..5507
                     /locus_tag="U0308_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEM2317587.1"
                     /translation="MKKNLRMLALGFLISAVVLLVYNQFFSTQTKADETKAASTKAGS
                     DENSSTWKNKYEKLLAQQEVDKATEAEAKKKAEEDAKKKAEEAKKVKSYTLKISKGDP
                     SSKAGDELQANGIIKSASDFDKYLRDNNYEKYIRDGSYNLKSDMSYETIAKILTHKN"
BASE COUNT         1763 a         1041 c          860 g         1901 t
ORIGIN      
        1 agcagtacat tatcgtgaac agcaaattgc ataatattag ctacaattaa atttttagta
       61 gcgttatctc taatgtcttg taaataaagg tttcctaatt catcatccgg tttgtcttta
      121 ttgttcgaaa tcaccaaatt atctccgtac caggaaataa aaggtgacgc gacatctatt
      181 ttatgcagtt gattcaacgt atagtcccaa ttttctattt gaaaattcca ttctggacta
      241 tatgagacaa acatgatttt ttcaggtgac tcatcattcc aataaaatgt cgtcgttaga
      301 ggctttgttg aacgtgaagc aacagttgaa ccatcattca aagcgattat tcgcatcgtg
      361 gctttttcag ctgattcagc agaataaagt aagatatttc gatagtctgg actaatttgc
      421 acttcagaaa tagattcctt cgtattaaag attggtcttt tcttttcatt atatatattc
      481 aattcttcaa aatacgtaac tccagatttt ttggtttgca gcaaaacaga atcttttgac
      541 aaccaaccaa ctactcgctg gaattctttg gttttgattt gaacaccttg tacttctttt
      601 gcagtctttt ttggcgtttc tttttcctcc gagcaaccaa aagagataaa aaccaatccg
      661 actaataagg taatcagcaa aaaaacattt gattttttca tctctggcct ccaatctctc
      721 tatgctaaaa ttttaccctt ttcaaaggaa gctaaaacaa tgcgttatag aaagattagc
      781 tttataaaac aagctacaat aatggagtgt tattgtagct tatacaaatt aaaattaata
      841 ttaatattaa tcttcacttg gtagtgctaa ccatgcagct ccaattatcc ctgcgtcatt
      901 cccttttgtc gcaatagata atttagtgga ttctttaaca gctgggaaaa ccattgtctc
      961 aaaataagtt ttaaccggtg ttaataattg atcgcctgct gctgaaacgc caccaccaat
     1021 aataatcttc tctggattta acatgtttcc aatatgactg agcgctaaag ccaaatagaa
     1081 agaaatttta tcaattgttt catttgctaa agcatcatct tctgctccta gttcaaaaat
     1141 caatttagaa gtaattgttt catcgttgtt tattgcatct ttaagtgcgg atttaccagt
     1201 atactctttc gctaaatctt tcgctactcg aacgattcct gttgctgatg cgacagtttc
     1261 taaacagcct tttttgccac aggtacaatc ataaccattc tcaggaacta ctgttacatg
     1321 cccaatttca ccagctgctc cgcgaatacc atgtaaaatt ttgccttctg cgaaaattcc
     1381 gccgccaacg cctgttccaa gtgttacgaa aacgacatta gccccacctt cgcctgcgcc
     1441 tttccagcgt tcaccaagag ctgcaacatt agcatcatta tctaatatga tttttaaacc
     1501 agtaatattt tctaaatctt gactaacatt ttgttcatct gcccagccta agttgtacgc
     1561 accttttaca gtacctgttt cataatttac agtacctgga gttcccatac caataccata
     1621 aaaaatatca ttatccagtt gtaagtccgt taatttttga ttgatagaat ccccaatgtt
     1681 tttaacaatg tgggcgccct tatcttcaat atttgtatca attgtccatt tttcttcaat
     1741 gtcgccttct tttgttaaaa tagctaattt tgctgttgtc ccgcctaaat ctacaccaat
     1801 taattttttg ttcattctgc tgttctcctt ataatcaatt taatttaaac tactattttt
     1861 tcgttgttct ttaattaatt cttgtttcaa tatacttcta gctctagcaa aagtttctct
     1921 atctaaaata ttatgtttaa aaagttctgt tatctcatat tccatcattt cgatgtcata
     1981 ttgtcgtttt cctaaataaa caataatgcc atgctttctt agtaattggg caacatcata
     2041 aactgttttc acattaaaaa cctcttattc tttgattttt tctaactcat cgtaataaga
     2101 atcaaaaaat ggattgcttg ataactctct agcgctgttc gcttctttaa ttgcatttgg
     2161 catatcgcct tttactctat agcaaacaga taaataataa tgagcttctg ggatgtcttt
     2221 gtcgatatta attgcttctt tagccattgt ttctgctttg tctatttgct tatcttgtaa
     2281 agcgatagat gcagcatacg tatatgaata gccgtcagca cttccgctag aaattaaatt
     2341 atcggtaatc ttggttgctt cttttttatt ttgttcttga aggtattgtt gtactgctac
     2401 attagcctgc atcggatcat atggttgttc tcctttttgg tagccaaaat acaaaaataa
     2461 aacagctaca ccaaaaagtg aaatgccata tgcaagtcgt cgccaatgga aaaattgttt
     2521 tggtaacgat aatgctccgg caagcaagaa accacctaca agaccaccaa tatgtccagc
     2581 aatatcaatc tgactagaaa atacatcaat taacaaatta attgcgacaa gtgacgcgat
     2641 actgacgcca attgtttttg cataaagatt tggttttaaa acaaccaaat aaagtaacgc
     2701 gcccattact gcaaatactg cagtacttgc accaacagat aaattcatat ttaatgcaaa
     2761 actggctatg tttccgcata ttcctcctaa gagaagaatt agaacatatc gccatttacc
     2821 ataaatacgc tctgcccaag cacctacaat ataaagcata actgcattgg aagctaaatg
     2881 cattaatcca ctatgaagaa aaatcggtga aataaagcgc caccattccc cagcatatat
     2941 aagtgggttg aatttcccgc cccatttaat taagttaaat gaattggtag ttccaccttg
     3001 gaaagaaagc cacaaaaacg ctacaaccaa aagaccaatg aacgtatacg taactattgg
     3061 ttttgaattc ctagcaactt tttgttcttc atttacttta gtagtaatat acgcgattac
     3121 ttgctctcgt tcttttgcta ctagctcttt cgttatttca tttggaagaa caaatgcttc
     3181 ttctggtaat tctaaagttt taacgagtgt gtctagatga tctctcattt gttcgttcgc
     3241 gagtaaaata ttttctaatt tcactttttc atttggagaa gcaattgact gcccaaaaaa
     3301 aggcgaaata tcacccattg gttcaaatgg tgttatataa atattcacaa gaggcaattt
     3361 caagcgcccc atttgcttac gaagattttc ggtaacgtgt aaagtgtgtg tcacatcacg
     3421 ttccaccaca ttagcccaac ttaattcttt catctgtata cggatgactg gtcttttttt
     3481 ctggcttgta ttttccaacc aaagttcttg tttctcctcg tgaagatgga ttaaacggta
     3541 tttttcaaca cccaagaaat aattagttag gcgccagaag acatattgtt cttggaagct
     3601 caaaaaattc cctgctttca ttacaaatta tatttactac tatacgcaaa aaaaagggtg
     3661 ttgtaaacaa tccaccctat tttctataga attatttttc cttatcctcc aattaaaata
     3721 gaaactggtt cgtcatgctt ttcaggtgta aactctattt gttgttcata aaggtacaag
     3781 gacactgtat gtccttgaaa atccgttaaa aatctatcgt aaaatcctcc gccaaaaccg
     3841 attctataat gatctttatt aaaggcaact ccaggaacaa ttagtaagtc aattactttt
     3901 ttatcaactg tttctgctaa ttcatttggt tctaaaatac caaacttaga ttttattaaa
     3961 ggatgtatcg aatccatctt tttaaactcc atttttttgc taggataata tgtttttgga
     4021 attaaaatgg ttttcccttc tttttttgct tgtaggatga ttgcttctgt ttcgatttca
     4081 gggtgtcttg ctaatgtgat accaacaacc tttgcatttt cccattctgg taataaaaat
     4141 agtttttccg ctaatctaat agaacgttcg cgatgttcta ctctatcaag gctattcaaa
     4201 ttccgtaaga ttttctcgcg tatcagtcgt ttgtcttcca ttttggcttc cccctttttg
     4261 ttaataaaaa aagcaacaga atggagatcc tgctgcttac ttagtttcgc ggtgtaaagt
     4321 tacacggcgt aatcttggac aatatttttt taattcaata cgttccggat tttcacgctt
     4381 atttttagta gtgatgtaat tacgatcacc gcattcagtg cattctaaag taatattaac
     4441 gcgcattatt tttccctcca actccgactg acgaatttat ttactaaacc tgtataataa
     4501 tatcattttt aatcagttgt tgcaaggact ctatgcattt tctttttatt ttctttacaa
     4561 aaccttattt cggatggtgt tttgaggtaa attatgctat aactagtagt agagtttatg
     4621 gaagagaggt gtgtataaaa cccatgacca cagtcataat tatcttacta attgctgcta
     4681 ttgcgctgtt tgttatttca tttctacaaa agggtgacaa taaacaatta gaaaaagaac
     4741 tggaagatgt tgctgctcag tggatgcaag aaaactttga actaaaacaa cgtatctctg
     4801 aactagaaaa agcaatgaaa atggatagcc caagcattga agctgagcaa gttcctgata
     4861 gcccgaaagt tcgtgaatta atgaaaaaac aagtgattac actttatact tctggaatcg
     4921 taacttcaga aattgctgaa cagtcatctt tacctaaaga agaagtggaa aaaatcattg
     4981 aagaatattt aaaacattga tttaaatttt aaaggaggag cctatctgtg aagaaaaact
     5041 tacggatgtt ggcgctaggt ttcttaatat ctgctgttgt cttactggtg tataaccagt
     5101 ttttctccac acagaccaaa gcagatgaaa caaaagccgc atcaacaaaa gctggttctg
     5161 atgaaaattc aagcacatgg aaaaataaat acgaaaaatt attagctcag caagaagtgg
     5221 acaaagcaac ggaagctgaa gcaaagaaaa aggctgaaga agatgctaaa aagaaagcag
     5281 aagaagcaaa aaaagtaaaa agttatactt taaagatttc taaaggagat ccttcttcta
     5341 aagctggtga cgaacttcaa gcaaatggta ttattaaaag tgcttcagat tttgataaat
     5401 atttacgaga taataattat gaaaagtaca ttcgtgatgg tagttataat ctcaaaagtg
     5461 atatgagcta tgaaacgatt gctaaaattt taacgcataa aaattaatac aaaaaaagga
     5521 aataagtcta gagcttgttt ccttttttgt gttattattt aagaa
//
LOCUS       DASDYK010000142         5553 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.142, whole genome shotgun sequence.
ACCESSION   DASDYK010000142 DASDYK010000000
VERSION     DASDYK010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5553
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.142"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..244)
                     /locus_tag="U0308_002633"
     CDS             complement(<1..244)
                     /locus_tag="U0308_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEM2317588.1"
                     /translation="MFSILMAIIQITGIFIAIQILTNKVFSIKEGLVTIAIAMLAFPL
                     FTLVQYWSMIFVLIVFVSALYWKNKNVVVSASITLVV"
     gene            complement(340..501)
                     /locus_tag="U0308_002634"
     CDS             complement(340..501)
                     /locus_tag="U0308_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic lactone autoinducer peptide"
                     /protein_id="HEM2317589.1"
                     /translation="MKNMNKSVGKFLSRKLEEQSMKVADSSMSKACFMFVYEPKSPFV
                     KMQEKNENK"
     gene            complement(485..1099)
                     /locus_tag="U0308_002635"
     CDS             complement(485..1099)
                     /locus_tag="U0308_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory gene regulator ArgB-like protein"
                     /protein_id="HEM2317590.1"
                     /translation="MSNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILIN
                     VMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLMMFVLAPF
                     VFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTG
                     IALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE"
     gene            complement(1356..1967)
                     /locus_tag="U0308_002636"
     CDS             complement(1356..1967)
                     /locus_tag="U0308_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEM2317591.1"
                     /translation="MYRKLATVGMTVLLVGALSACSFNDDKDTSSNNSSNETTSSKSS
                     NNESSSDSLQNKSFDMSYEDAINAFKDKHSDAEISSVELEKSLGKYVYKVDGISNDNE
                     YEMKFNAETKEQLSDETDRLDREDAGGVEKENEKLSLDGIKSPKEAMDKAVSEQAGDV
                     TSWKIERELDTTYYEVTVKQDNNKYEIKLNAKTLEILQTEQDD"
     gene            complement(2120..2359)
                     /gene="rpsR"
                     /locus_tag="U0308_002637"
     CDS             complement(2120..2359)
                     /gene="rpsR"
                     /locus_tag="U0308_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEM2317592.1"
                     /translation="MAGGRRGGRRRKKVCYFTSNGITHIDYKDVELLKKFVSERGKIL
                     PRRVTGTSAKYQRKLTVAIKRSRQMALLPFVAEEK"
     gene            complement(2403..2939)
                     /gene="ssb"
                     /locus_tag="U0308_002638"
     CDS             complement(2403..2939)
                     /gene="ssb"
                     /locus_tag="U0308_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEM2317593.1"
                     /translation="MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRTFTNQQGER
                     EADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQF
                     LEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNND
                     PFASDGKPIDISDDDLPF"
     gene            complement(2995..3288)
                     /locus_tag="U0308_002639"
     CDS             complement(2995..3288)
                     /locus_tag="U0308_002639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEM2317594.1"
                     /translation="MARKYEIMYIIRPNIEEDEKKAVVERFDGILTENGAEIIESKEW
                     GKRRLAYEINDYRDGFYHIVKLNADKADSINEFDRLAKISDDIIRHMVIKEEA"
     gene            complement(3567..4799)
                     /gene="arcA"
                     /locus_tag="U0308_002640"
     CDS             complement(3567..4799)
                     /gene="arcA"
                     /locus_tag="U0308_002640"
                     /EC_number="3.5.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase"
                     /protein_id="HEM2317595.1"
                     /translation="MKMEQALNITSEIGKLQTVLVKRPGSELENITPEYLESLLFDDI
                     PYLKMMQKEHDFFAKTMKDSNIEVLYLEKLAAEALREANNKESFLTKMIKESNQMDES
                     ALYVRDYLMSFDEEEMIRKLMSGLKKSEIPERKKKHLNEMMDEQYPFFLDPLPNLYFT
                     RDPAAVIGNGVTINRMFQPARRRESMFIELILKHHPRFSNQEIPVWSGRGEPFSLEGG
                     DELVLNEETVLVGVSERTDARAVERLAESLFSRSPKIKRVLAVEIPETRSFMHLDTVF
                     TMVNFAQFTIHPAIQNQQGELNIYILEKSENGLEITPRRDFQRVIAEVLDEPEIDFIP
                     CGGEDVIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAGIKVHEVISSELSR
                     GRGGPRCMTMPLVRENLK"
     gene            complement(4878..5537)
                     /locus_tag="U0308_002641"
     CDS             complement(4878..5537)
                     /locus_tag="U0308_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEM2317596.1"
                     /translation="MDFITYIIDFILHIDQHLVEIINNFGIWTYIILFLIVFIETGLV
                     VFPFLPGDSLLFAAGALSVLDGSILHIVPLIITLWLAAVLGDTVNYHIGKKIGTSIPE
                     DSWFGKLINKEKMEKAEAFFNKHGGKTIFIARFMPFIRTFAPFVAGASRMNYRYFLNY
                     NILGATVWVLLCTLAGYFFGNFPIVKDNFSLVVIGIIVVSVIPMVVSFIKSKMDKKSA
                     E"
BASE COUNT         1685 a         1134 c          835 g         1899 t
ORIGIN      
        1 taaccacaag cgtaatagaa gctgaaacta ctacattttt atttttccaa tataaggcac
       61 ttacaaaaac aatcaataca aaaatcatcg accagtattg aactaatgta aataaaggga
      121 aggctagcat agcaattgct atagtaacca atccctcttt aattgaaaaa actttgtttg
      181 ttaaaatctg gattgcaata aaaatacccg ttatctgtat aattgccatc aaaatactaa
      241 acatattaat cctccactgt ctaaaatatc tatgtttaaa tatgtaagtt tgccttcttt
      301 ttattttagc atgaattttg atgttataca gttttaaatt tatttatttt cgtttttctc
      361 ttgcattttc acaaatggac tttttggttc gtatacaaac atgaaacaag ctttactcat
      421 agaagaatcc gcaactttca tggattgttc ttctagtttt ctagaaagga atttaccaac
      481 tgatttattc atatttttca tagttccgat acctcctttt caatagtttg taagtaagtg
      541 gattaatact tatcacctga aacaaagatc ctaccatgat taatgttttc atctctgcga
      601 atggtattag caacgcaatt cccgttaaaa ttagcgtccc tatcatcgct tttcttttta
      661 gtgttttccg gtgttcttca ccgattaaag gcaaactttc tgtgtctgcc ggagcgaata
      721 gaaacatgtt gagcagtata aatccaaatg tacctaaaac aatccaatta ttagagggga
      781 tattttgaaa aacaaatggc gcaagcacaa acatcatcaa gctaattaac gtgcaattca
      841 atgttttggt tgcatgtaat ccaaaagaat accgtctgag ccataaatat gacagatgta
      901 ctgtcactgt ttgcagtaat aaccctgtta ctaaggcaat accgtatacg agagcaaact
      961 tcatgacatt aattagaatt atttccagtc catattttac ttttaaataa ccttcttcat
     1021 catctttcca gcggtctttc gaaatcagca catccgccat tctttctgac aaagggactt
     1081 ttgcagtaaa attactcaac taattcacct ccactaatat tttacaacga atttacccat
     1141 aataaccaaa aatgtaatga aatgtccgat tcttgtcatg aacgaccaaa aaagagcaaa
     1201 attgccgatt ttttggatac atttcagaat attcaatcgt gtaaaaagga ctgtatgata
     1261 ggtttaaaaa cccatattaa tattttattt aagtaagttt attcattaaa aaagccaact
     1321 gtaaaagaat gttcacagtt ggcttttcca ttttattaat cgtcttgttc cgtttgaaga
     1381 atttctaaag tttttgcatt tagtttgatt tcgtatttgt tattatcttg ttttactgtc
     1441 acttcataat aagttgtatc taattctctt tctattttcc aacttgttac gtcaccagct
     1501 tgttcagaaa cagccttatc catggcttct tttggtgatt taattccatc taagctaagt
     1561 ttttcgtttt ctttttcaac tccacctgca tcttctcggt caagtcgatc tgtttcatca
     1621 cttagttgtt cttttgtttc agcattgaat ttcatttcgt attcattatc atttgaaatc
     1681 ccatcaactt tatagacata ttttcccaag cttttctcta attcaacgct agatatttct
     1741 gcatcactat gtttgtcttt gaatgcgtta atcgcgtctt cataactcat atcgaagctt
     1801 ttgttttgca agctatctga tgaactttca ttattactgc ttttgctact agtagtttca
     1861 ttgctgctat tatttgatga tgtatcctta tcatcattaa aactacatgc tgataatgct
     1921 cctactaata ataccgtcat ccctactgtt gctaattttc tatacataat tgtttccccc
     1981 tgtgcatttt tttacttcta tataagaata acatgaataa atagcattaa cttccttctt
     2041 aggtcctagg ttcacatgat ccaaggtcta atttatgaaa aaacagtcta gaaatgaatt
     2101 ctagactgtt aaaattaatt tatttttctt cagcaacaaa tggtagtaat gccatttggc
     2161 gtgagcgttt gatagcaaca gtaagtttac gttgatattt agcgcttgtt ccagttacac
     2221 gacgaggtaa aattttacca cgttcggaaa cgaatttttt aagaagttct acatctttat
     2281 agtcgatatg cgtaatacca ttggaagtaa agtaacatac ttttttccga cggcgtccgc
     2341 ctctgcgtcc tccagccatt gaaagttcct cctatcttaa agttcaaacc gctaaaatga
     2401 atttagaatg gcaaatcgtc atcagaaatg tcgattggct taccatcact tgcaaaagga
     2461 tcattattag tggattgata attttgattt tgagattgtt gctggtcctg tccgaatcca
     2521 ccgttatttg taggtgcttg tccgaagtta tttccaccgc tattataatt attgttgtta
     2581 ttgccacttt gatagttatt tccgccaccg ccattagaat tacgcggttc aaggaattga
     2641 acactctctg ctacaatttc agtcacataa acacgtttac cgtcgttccc ctcgtaatta
     2701 cgagtttgaa cacggccatc aacgcccgcc atgcttcctt tcttcaggaa attagcaacg
     2761 ttttctgccg gtttacgcca aacaacacaa ttaataaagt cagcttctcg ttctccttgt
     2821 tggttagtga aagtgcgatt tacagctaat gtaaaagtcg caacagccac accagctgga
     2881 gtgtaacgta attcaggatc ttttgttaag cgtcctacaa gtactacacg attcatcatg
     2941 caaaaccaac ctcctctcgt ttagtaaatc aaggtcctag ccttgaatga attcttatgc
     3001 ttcttcttta attaccatat gacgaatgat atcatcagaa attttagcta aacggtcaaa
     3061 ttcgttgata gaatctgctt tatcagcgtt taatttcacg atgtggtaaa aaccatcacg
     3121 atagtcattg atttcgtatg ctaagcgacg tttaccccat tcttttgatt cgatgatctc
     3181 cgcaccattt tcagttaaga ttccgtcaaa gcgttctaca acagcttttt tctcatcttc
     3241 ttcaatgttt gggcgaatga tgtacataat ttcgtacttt ctagccatct actctacacc
     3301 tccttgtggt cttaagcggc tctgatatag catgaaacca taccatatcc ctgaaattca
     3361 gactgccttt agcaagcctt aaaatcaaga gcgagcaagg aataatttat aattactcac
     3421 aataaaatat tatatcatag cgctaactaa ccagcaagat atttctcgaa aattctggtt
     3481 tgaaaacact atagcacatc tcaaaatagc cggcaatact ttttacgaaa gtcttgtttt
     3541 gcaggggaat tctcgttttt aaagacttat tttagatttt ctctaacaag cggcatcgtc
     3601 atacatcttg gccccccgcg gcctctagaa agctccgaac taatcacttc atgaacctta
     3661 atacccgcac ttcttaacag atcgtttgat acttgatttc gatcatatgt aattacttct
     3721 ccaggagcaa ttgctaacgt gtttgcccca tcattccact gctctcgcgc cgaaacaatt
     3781 acatcttctc cgccacaagg aataaaatca atttctggct catccaaaac ctccgcaatc
     3841 acgcgctgaa aatctcttcg cggagtaatt tctaatccat tctcactttt ttctaaaatg
     3901 tatatattaa gttctccttg ttgattttga attgctggat gaatcgtgaa ctgtgcaaaa
     3961 ttaaccatgg tgaaaaccgt gtccaaatgc ataaatgacc ttgtttcagg aatttcaaca
     4021 gctaaaactc gtttaatttt tggagaacga ctaaataaac tttctgcaag ccgttcgact
     4081 gctcgtgcat ccgttcgctc agatacaccg acaagaacag tctcttcatt tagaactaac
     4141 tcatctccac cttctaaaga aaacggctct ccgcgccctg accataccgg aatttcttga
     4201 ttactaaaac gaggatgatg tttcaaaatc agctcgataa acatcgactc tcgccttcta
     4261 gctggctgga acattctatt aatcgtcaca ccgttaccaa taacagctgc tggatctcga
     4321 gtgaaataca aatttggtaa tggatctagg aaaaatggat attgttcgtc catcatttca
     4381 tttaagtgtt tctttttgcg ttcggggatt tctgattttt ttaaaccgga cataagtttt
     4441 ctaatcattt cttcctcgtc aaaagacatc aaataatctc gtacatatag cgcactttcg
     4501 tccatttgat tggattcttt aatcattttc gttaaaaaag actctttatt gttagcttct
     4561 cgtaatgctt cagcagctag tttttctaag tagagtactt cgatgtttga atctttcatt
     4621 gttttagcaa aaaaatcatg ttccttctgc atcattttta aatacggtat atcatcaaat
     4681 aataaagatt ctaggtattc tggtgtgata ttttcgagtt cagaacccgg cctctttaca
     4741 agaactgttt ggagtttgcc aatttcagat gtaatattca atgcttgttc cattttcatc
     4801 acctcttcct aactaattac cccaaaagtt tgtcatgtat gcgagagatt tcccgggaaa
     4861 taaaaaaagc acagagatta ttctgcgctt tttttgtcca ttttactttt aatgaacgaa
     4921 actaccattg ggataacgga aactacgata attccgatta ctactaacga gaagttgtct
     4981 ttaacgattg ggaagttccc gaagaagtaa cccgcgagcg tacaaagtaa tacccaaaca
     5041 gttgccccta aaatattata atttaagaaa taacgataat tcatacggct tgctccagct
     5101 acaaatggcg cgaacgtgcg aataaaaggc atgaacctag caataaaaat tgtttttcca
     5161 ccatgtttat tgaagaacgc ctccgctttt tccatttttt ctttatttat tagtttccca
     5221 aaccagctat cttctggtat ggatgttcca atctttttac cgatatgata gttcactgta
     5281 tcgcctagaa ctgctgctaa ccataaagta ataattagcg gaacaatatg taaaatcgaa
     5341 ccatctaata cagataatgc accggctgcg aatagtaatg aatctcctgg taaaaatgga
     5401 aatactacca atccagtctc tataaaaaca atcaggaaca aaataatgta agtccaaatt
     5461 ccaaaattat ttataatctc cactaaatgt tggtcaatgt gcaaaataaa atcaatgata
     5521 taggtaataa aatccaccag gcactcactt cct
//
LOCUS       DASDYK010000143         5509 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.143, whole genome shotgun sequence.
ACCESSION   DASDYK010000143 DASDYK010000000
VERSION     DASDYK010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5509
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.143"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..543)
                     /gene="mecA"
                     /locus_tag="U0308_002642"
     CDS             complement(<1..543)
                     /gene="mecA"
                     /locus_tag="U0308_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adaptor protein MecA"
                     /protein_id="HEM2317597.1"
                     /translation="MEIERINEDTIKFYISYLDLEERGFNQEDVWYDREKSEELFWDM
                     MDELKYEEEFSPEGPLWIQVQALKHGLEVFVTKATIGGKGEDGFDVTLSSPDELAEEK
                     IEKLLEENFNPVKKEALGDDDTLEFILEFRDFEDAISLSRATGLENLVTKLYSYQGKY
                     YLNVEFPENKYDESNIDNAVS"
     gene            complement(776..1171)
                     /gene="spxA"
                     /locus_tag="U0308_002643"
     CDS             complement(776..1171)
                     /gene="spxA"
                     /locus_tag="U0308_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator Spx"
                     /protein_id="HEM2317598.1"
                     /translation="MVTLYTSPSCTSCRKARAWLEEHDIPYKERNIFSEPLSLDEIKE
                     ILRMTEDGTDEIISTRSKTFQKLNVDLDSLPLQQLFELIQKNPGLLRRPIIIDEKRLQ
                     VGYNEDEIRRFLPRRVRTYQLREAQKMVN"
     gene            complement(1491..2459)
                     /locus_tag="U0308_002644"
     CDS             complement(1491..2459)
                     /locus_tag="U0308_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2317599.1"
                     /translation="MTEQREKLLEIHNLKQYFNKGTASEVRAVDDISFDIYKGETLGL
                     VGESGCGKSTTGRTIIRLYDATGGEVIYNGKNVHARKSRKEMLEFRRKMQMIFQDPYA
                     SLNPRMKVKDIIAEGIRIHGLAKTPEETNKQVYDLLETVGLSKEHAGRYPHEFSGGQR
                     QRIGIARALAVQPEFIIADEPISALDVSIQAQVVNLLRQLQKEKNLTYLFIAHDLSMV
                     KYISDRIGVMYFGKLVELAPANDLYHAPLHPYTESLLSAIPLPDPNYERTRVRKTYDP
                     TSHNYKDGDEIKMREIAPGHFVYCSEEEEVMYKEKHAKLTAEAAAK"
     gene            complement(2456..3532)
                     /locus_tag="U0308_002645"
     CDS             complement(2456..3532)
                     /locus_tag="U0308_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317600.1"
                     /translation="MEKLLEVKDLNISFHTYAGEVKAIRGVNFDLYKGETLAIVGESG
                     SGKSVTTKSIMRLLPEGNSEIKSGQILFNGMDIAKAHEKQMQKIRGKDIAMIFQDPMT
                     SLNPTMTIGKQISEPLIKHQKISKHEAHKTALRLLQLVGIANAEERIKQYPHQFSGGM
                     RQRVVIAISLACNPQILIADEPTTALDVTIQAQILDLMKDLQKKIDTSIIFITHDLGV
                     VANVADRVAVMYGGKIVEIGTVDEIFYNPQHPYTWGLISSMPTLDTDDEELFVIPGTP
                     PDLLHPPKGDAFAARNKYAMQIDLEEEPPLFKVSDTHYAATWLLHPDAPEVTPPDAVL
                     RRQEQFAELHPGMQAVHAKGVEVE"
     gene            complement(3550..4584)
                     /locus_tag="U0308_002646"
     CDS             complement(3550..4584)
                     /locus_tag="U0308_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317601.1"
                     /translation="MAEHKIAKERFQPAHILDAEAEKINRPSLTFLQDSWLRIRKNKA
                     ALVSLIVLALVIIMAIVGPYLSQNLGPKHDINRQITENASLPPKVQGFENMPFWNGHQ
                     SIGGEDVDIYKQNNIKEGTYYWLGSDTLGRDQFARIWAGTRVSLIIAVVAALCDLIIG
                     VAYGLISGYVGGRVDNFMQRVLEVIGAIPNLVVVILMMLILEPGIVSIIIAIAMTSWI
                     TMARVVRGQVLKLKNQEFVMASMTLGESTPKILIKHLIPNISGIIIINIMFSIPSAIF
                     FEAFLSFIGLGLPAPAASLGVLVNDGYKTLQVLPYMILYSCIVLCIIMIAFNLIADGL
                     RDAFDPKMRD"
     gene            complement(4584..>5509)
                     /locus_tag="U0308_002647"
     CDS             complement(4584..>5509)
                     /locus_tag="U0308_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317602.1"
                     /translation="KYTLKRVLYMLITLFIIASVTFVLMKFLPGTPYRNQEKLSDEQI
                     HMMNEKYGLNDSIPVQYLNYMTGLVKGDLGVSFQLDNRPVSEILSALIGPSVQLALEA
                     MAFGVIFGILLGVIAAMYQNRWPDYTSTFIAILGKSVPSFVFATVLQYWLGAKLQIFP
                     VAGWGTFADTILPAFALAMFPLATAARFMRTELIDVFASDYVLLAKAKGNSRTEVAVK
                     HAIRNALIPLITVLGPLSVALMTGSLVIENIYSIPGIGSQFVSSIQTNDYPVIMGTTI
                     LFAVMLVFVILVVDILYGLIDPRIRVSGGRK"
BASE COUNT         1737 a         1101 c          903 g         1768 t
ORIGIN      
        1 actaacggca ttgtcaatgt tagattcatc atatttattc tcaggaaatt ctacattcaa
       61 ataatacttt ccttgatacg agtatagctt agttactaaa ttttctagtc cagtcgctcg
      121 tgaaagagaa atagcatctt caaaatcacg gaactctaaa ataaactcta gtgtatcatc
      181 gtctccaagt gcttctttct tcactggatt aaagttttct tcgagtagtt tttcgatttt
      241 ttcttctgca agctcatctg gcgagctaag cgtgacatcg aagccatctt cgccttttcc
      301 accaattgta gcttttgtta cgaatacttc taagccatgt tttaaggctt ggacttgtat
      361 ccagagcgga ccttccggag agaactcttc ttcatatttc agctcatcca tcatatccca
      421 gaaaagctct tcacttttct cgcgatcata ccaaacatct tcttggttaa aacctcgctc
      481 ttccaaatcc agataagaga tataaaactt gattgtatcc tcattaattc gttcaatttc
      541 catcgtcaca ctctcccttc cttcttagtc attgacaatg aagggtaaaa cttaattggt
      601 taaattcatt gtagctcata ttaagaaata gtaccaccat ttttccttcg atttgcttgg
      661 tggaatctta tcttagctga aaagcgaaaa aaattcaaga acatttactt aaactacaaa
      721 aaaaagcgcc aagaatccaa ttgaatggaa tccttggcaa ccacttttat caatcttagt
      781 taaccatttt ttgcgcttca cgtagttgat acgtacgtac acggcgcggt aagaaacggc
      841 gaatttcatc ttcattgtac ccaacttgca aacgtttttc atcaataatg ataggacgtc
      901 ttaataagcc aggatttttc tggattaatt caaatagttg ttgcaaagga agactatcta
      961 aatccacgtt cagtttttgg aacgtttttg aacgagtgga aataatttca tctgtaccat
     1021 cctcagtcat acgaagaatt tctttaattt catccaaact aagtggctca gaaaaaatgt
     1081 ttctttcctt ataagggata tcatgttctt ccaaccatgc acgagctttt cggcaagatg
     1141 tgcaactagg tgaagtgtat aacgttacca ttagacattc acactcctta tcgggtattg
     1201 tttcattcat ataacgaaat tctagcaata tctctatttg gaaaattcat taaagaactt
     1261 acacttcatt atacactaat tttgtgaaat tccatatact attttcaaaa attttctttc
     1321 caaatatgta aaaccattgt tagcaagccg ttatgtatat gataccccta ctataacttg
     1381 tttaaactaa aatcacatga aaaaaatagc ttttttatga gaatttcatg agaattttaa
     1441 ttttgtaaaa aaaacatcaa tcaaatttta ctctgattga tgttttccta ttatttcgca
     1501 gcagcttcag cagttagctt agcatgcttt tctttataca taacttcttc ttcttctgaa
     1561 caataaacaa aatgtccagg agcaatttcg cgcattttaa tttcatcgcc atctttatag
     1621 ttatgagacg ttgggtcata tgttttacgc acacgagtac gttcataatt tggatctggc
     1681 aacggaatcg cggataaaag tgattctgta taagggtgta gcggcgcatg atacaaatca
     1741 tttgctggcg ctaactctac taatttaccg aagtacatta cgccaatacg atcactaatg
     1801 tatttaacca ttgataaatc gtgggcaatg aataggtaag ttagattttt ttctttctgc
     1861 aattgacgta ataagtttac tacttgcgct tggatagata catctagtgc ggaaataggc
     1921 tcatcggcaa taatgaattc tggttgaaca gcaagcgcac gagcgatacc aatacgttga
     1981 cgttgaccgc cggaaaactc atgtggataa cggccagcat gttctttact taatccaact
     2041 gtttctaaca aatcgtatac ttgtttattc gtttcttcag gtgttttagc aaggccatga
     2101 atacgaatac cttcagcaat gatatcttta actttcatac gcggatttaa agatgcgtat
     2161 ggatcttgga aaatcatttg cattttacga cggaattcaa gcatttcttt acggctttta
     2221 cgtgcatgca catttttacc attatagata acttctccgc cagtagcatc gtataaacga
     2281 atgatagtac gtccagttgt agatttacca caaccagatt ctcctactaa accaagtgtt
     2341 tcacctttat aaatatcaaa agaaatatca tcaaccgcgc gtacttcact tgcagtacct
     2401 ttgttgaagt attgttttag attatgaatc tctaataatt tttctctttg ttcagtcatt
     2461 ctacttctac ccctttcgca tggacagctt gcatgccagg atgaagttcc gcaaactgct
     2521 cttggcgacg taatacagca tcaggtggcg ttacttctgg cgcatcagga tgaagcaacc
     2581 atgtagccgc ataatgtgta tcagacacct taaatagtgg tggctcttct tcaaggtcaa
     2641 tttgcattgc gtatttatta cgcgcagcaa atgcgtcccc ttttggagga tgaagtaaat
     2701 caggtggcgt accaggaata acaaataatt cttcatcatc tgtatccaaa gtaggcatag
     2761 agctaattag tccccatgta taaggatgtt gtggattata gaaaatttca tcaactgttc
     2821 cgatttcaac aattttacca ccgtacataa cagctacacg gtctgcaaca tttgctacaa
     2881 caccaaggtc atgggtaata aagataatcg acgtatcaat ttttttctgt aagtccttca
     2941 ttaaatctaa aatttgcgct tggatagtta catctagcgc tgttgttggc tcatctgcaa
     3001 taagaatttg tgggttacat gcaagtgaaa tcgcaataac aacccgttga cgcatcccac
     3061 ctgaaaattg gtgaggatat tgtttaattc tttcttctgc gttggcaata ccaactaatt
     3121 gaagtaaacg aagtgctgtt ttatgtgctt catgtttact gattttttgg tgcttaataa
     3181 gtggttcaga aatttgttta ccaattgtca tcgtaggatt taatgatgtc attggatctt
     3241 ggaaaatcat agctatatct ttcccacgaa ttttttgcat ttgtttttcg tgagctttag
     3301 cgatatccat tccgttaaat aaaatttggc cacttttaat ttctgagtta ccttctggaa
     3361 gtaaacgcat aatcgatttt gtcgttactg atttaccaga accagattcg ccaacaatcg
     3421 ctaaggtttc ccctttatat aagtcaaaat taactccacg aatcgccttt acttcaccgg
     3481 catatgtgtg gaatgaaata tttaaatctt taacttctaa tagcttttcc atttttcctc
     3541 acctctcttt taatcgcgca ttttaggatc gaaggcatca cgcaagccat ctgcaattaa
     3601 gttaaatgca atcataatga tacaaagtac aatacatgaa tacagaatca tatacggtaa
     3661 tacttgtaat gttttatatc catcatttac caagacacca agagacgctg ctggcgctgg
     3721 aagaccaagc ccaataaagc ttaagaaggc ttcaaagaaa atcgcactag gaatactaaa
     3781 catgatgtta atgataataa tcccagaaat atttggtatt aaatgtttta taagaatttt
     3841 aggagtagat tcccctaaag tcatggaagc cataacaaat tcttggtttt taagttttaa
     3901 aacttgtccc ctgactaccc gggccatcgt tatccaactc gtcattgcga ttgctatgat
     3961 aatagataca atacctggtt cgagtattaa catcattaaa ataaccacaa ctaagtttgg
     4021 aattgcacca ataacttcta aaacacgttg catgaaatta tctacacggc ctccaacata
     4081 accagaaatc aaaccgtaag caaccccaat tataaggtca caaagcgctg ctacaacagc
     4141 aataataaga gatacacgtg taccagccca aatacgagca aattggtcac gtccaagcgt
     4201 atcactacct aaccagtagt aagtaccctc tttaatatta ttttgtttat aaatatcaac
     4261 atcttctcca ccaatagatt gatgaccatt ccagaaaggc atattttcaa agccttgaac
     4321 ttttggagga agactcgcat tttcagtgat ttgtcggtta atatcatgtt ttggtcctag
     4381 attttgtgat aaataaggcc caacaattgc catgataata acaagtgcta atacaattag
     4441 agaaactaaa gccgctttat ttttacgaat acgaagccaa gaatcttgca agaaagttaa
     4501 acttggacga ttaattttct ctgcttctgc atccagaatg tgtgctggct gaaatctttc
     4561 ttttgcaatt ttatgttctg ccattatttt ctacctccag acacacggat tcgaggatca
     4621 atcaatccgt aaagaatatc cactaccaag ataacaaata ccaacatgac agcaaataaa
     4681 attgtagttc ccataataac tggatagtca tttgtttgaa tagaagaaac gaattggcta
     4741 ccgataccag gaatactata aatattttca ataacaaggg aaccagtcat cagtgcaact
     4801 gataatggtc ctaaaactgt aattaaagga ataagtgcat tacgaatcgc atgtttaact
     4861 gctacttccg ttctactatt ccctttcgct ttggcaagta gaacataatc agatgcaaat
     4921 acatcaatta actctgttct catgaaacga gctgctgttg caagcgggaa catcgcaagt
     4981 gcgaatgctg gcagaatagt atctgcaaac gtaccccaac ctgctactgg gaaaatttga
     5041 agttttgctc caagccagta ttgtaaaaca gtcgcaaata cgaaagatgg aactgactta
     5101 cctaatattg ctataaatgt actcgtataa tccggccacc tattctgata catggccgct
     5161 attaccccta gtaaaatacc aaaaataaca ccaaaagcca ttgcctcgag tgctaattgg
     5221 acagatggac caatcagtgc acttaaaatc tcagacactg gtctattatc aagttggaag
     5281 gaaacaccta agtcaccttt taccaaacct gtcatataat ttaagtattg gactggaatt
     5341 gaatcattta gtccatattt ttcattcatc atgtgaattt gttcgtcaga tagtttctcc
     5401 tgattacggt aaggcgtacc aggtaagaat ttcataagaa caaacgtaac cgaagcaatg
     5461 atgaataacg ttataagcat atataatact ctttttaacg tatatttaa
//
LOCUS       DASDYK010000144         5377 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.144, whole genome shotgun sequence.
ACCESSION   DASDYK010000144 DASDYK010000000
VERSION     DASDYK010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5377
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.144"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..260
                     /locus_tag="U0308_002648"
     CDS             <1..260
                     /locus_tag="U0308_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEM2317603.1"
                     /translation="ENTRQIQMESGQLYNQFLPDIREKVVNHVMGIVPIVARLIRNPE
                     TGQRGFLLTENNGNFAKNQLDNREFALQEDLFQIGDVDVKA"
     gene            324..1580
                     /locus_tag="U0308_002649"
     CDS             324..1580
                     /locus_tag="U0308_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEM2317604.1"
                     /translation="MRCCSLWLGAGKSVILSEIIRMTTRNKNHVLFLVHRKELIDQIR
                     NTLIMNEVDMEFVKLGMVQTIVGRLNKTSEPSLIIIDESHHVLANSYKKIIHHFSNAK
                     VVGFTATPVRINGGGLGDINDMLIEKVNVKWLIENQFLAPYKYFAPEIVQTETLDIKR
                     TGEFDMTGLDDQFNKRMIWGDVIKHYQKLANGEQAILYASSLYQSEKMAMSFESVGIT
                     SAHIDGKTPKSIRDDIIQRFREGEIKVLCNLDLIGEGFDVPDCSTVIMLRPTQSLSLY
                     IQQSMRGMRYRTGKTAIIIDHVGNVNRFGLPDMERKWSLEPRKGSNSTKAEAPVKICK
                     ECFMTVSQTAKKCEHCGHEFKVEVKPMQVDEAAELQEITEAVFKVNYSSPSECTNMKE
                     LYEYAKEHNYKRGWAFHQGKARGFIK"
     gene            1603..2088
                     /locus_tag="U0308_002650"
     CDS             1603..2088
                     /locus_tag="U0308_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011702027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF669 domain-containing protein"
                     /protein_id="HEM2317605.1"
                     /translation="MFKVDHNDVFTNGVENGTYEVVLYNANEDATKNGAEFINIDLII
                     RNDVNQKFQNAHIFHRVWKAKATNEYSQTALNTIAKAIQLPNGKDYNTLDELLKDLLT
                     KTCQVTVKNEESEYNGQIYKNLNVKAWAESKITGPLQHVFKKKENELPPVEVNESNLP
                     F"
     gene            2111..4399
                     /locus_tag="U0308_002651"
     CDS             2111..4399
                     /locus_tag="U0308_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012581466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEM2317606.1"
                     /translation="MYEQIPDELKKLKQWCAFQLVWDEERGKNKKIPMNANNGSYGNS
                     VDERTWADFETALDSLEKYQFDGLGFYFKKPYFGVDIDDIKDEIEDYLYGNTENIAGE
                     FIQTLSSYTEYSVSGTGIHIIAKGSFPEGGRRKGNIEMYPDGRFFVMTGQVIDNYRQV
                     NEATSAIQYLHTKYIGTNEVRQINNLQSTVDLPVSDIIQRAERSKQGAQFKTLYDGLW
                     DGLYPSQSEADLAFANMLAFWTGCNAEKMDEIFRSSGLYRTKWDQKRGAQLYGEMVIN
                     KAIANTSEVYQPGSDLEGYSITVKNQNRTARKVYGLDDTGNAERFRDKFHDIVRFSYI
                     NKGFYFYDSKVWKYDNIGAVKTLVDDVIKDMKSEFAYMENESDAEKAFMKHLKATRSN
                     KGKTNMLKEAQHLMPVLPDEFDRYKYFLNTQNGYINLQNGELINHDRQKMFTKISNIE
                     YTDKIDAPLWQAFLKDIFAGDKELIDYIQKAVGYSLSGSTSEQVMFILFGNGRNGKSV
                     FLDIINDIFGSYATNIQPQTIMVKQQSSNANSDIARLHGARFVTTTEPNEGVRLDEGL
                     VKQLTGGDKVTARHLYKDEFEFTPEFKIWMATNHKPIIRGRDDGIWRRLHLVPFTVKI
                     PDEKVDKQLKYKLRSELTGILNWAVEGFLKWQREGLGMPKAVEKASSEYKSEMDVITA
                     FIEDCCETGENKQINAKTLYETYREWARDNGQYLMSSTKFGKEMGLKFEKKRSNGQTA
                     YKCITLNKEYNPMNKPFFSTSY"
     gene            4733..5050
                     /locus_tag="U0308_002652"
     CDS             4733..5050
                     /locus_tag="U0308_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HEM2317607.1"
                     /translation="MTAEMDIQNSIRLELSRHGHYVFRANVGKVKLPNGRIFDTGLPK
                     GFPDLFGFRGTDGKMFFIEVKNEIGKLRQEQKNFQQAMEITPAICGVARSAAEAVRIV
                     EEG"
     gene            5052..5264
                     /locus_tag="U0308_002653"
     CDS             5052..5264
                     /locus_tag="U0308_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317608.1"
                     /translation="MKLRDITNSKCDVREYMNVDFPDWLLEQLKDEIDFDIIEALKEY
                     AVIYVKHNALEKEIEPFDIYKKVEEG"
BASE COUNT         1986 a          813 c         1136 g         1442 t
ORIGIN      
        1 gggaaaacac gcgtcaaata cagatggaaa gtgggcaact gtataatcaa tttttgcctg
       61 acattagaga aaaggtagtt aatcacgtta tgggaattgt tcctatagtc gcaagattaa
      121 taagaaatcc tgaaacaggt cagaggggtt tcttactcac agaaaacaat ggtaattttg
      181 caaaaaatca gctagataat agagagtttg ccttgcaaga agacctattc caaataggtg
      241 atgttgatgt taaagcttag agaatatcaa caagaaatta taaatgatgt aaagggggct
      301 tttttacagg gatataacag accgtgcgtt gttgctccct gtggctaggc gctggtaaat
      361 cagttatttt atcagaaata attcgcatga caacgcgcaa taaaaaccat gttcttttcc
      421 tagttcaccg aaaagagttg atagaccaaa tcagaaacac actcattatg aatgaagtgg
      481 atatggaatt tgtcaaattg ggtatggtac aaacgatagt tggacgttta aacaaaactt
      541 cggagccttc gttaatcata attgatgaaa gtcatcatgt gttagcaaat agctataaaa
      601 aaataattca tcacttttct aatgcgaaag tggtcggatt tacagcaaca ccagtgagaa
      661 taaatggggg tggtttagga gatataaacg atatgttaat cgaaaaggtt aatgtgaaat
      721 ggttaattga aaatcaattc ttagcacctt acaaatattt tgctcccgaa atcgttcaaa
      781 cagaaacatt agatatcaaa cgaactggtg aatttgacat gacaggactt gatgatcaat
      841 tcaataaaag aatgatttgg ggcgatgtca tcaaacatta tcaaaagtta gcaaacggag
      901 aacaagcaat actttatgcc tcttctcttt atcaaagcga aaaaatggca atgagttttg
      961 aatcagtagg cattacatcc gcacatattg acgggaaaac acctaaatcc attcgtgatg
     1021 acattataca acgatttcga gaaggcgaaa taaaggtgct ttgcaactta gatttaattg
     1081 gtgaaggatt cgatgttcca gactgttcta ctgtgattat gctaagacca actcaatctc
     1141 tatccctgta tattcagcaa tcaatgcgag gtatgcgata ccgaactggt aaaacagcta
     1201 ttattattga ccacgttgga aatgtcaatc gctttggttt gccagacatg gaacgaaaat
     1261 ggtccttaga acctcgtaaa ggaagtaact ccacgaaagc tgaggcacct gtgaaaattt
     1321 gcaaagagtg ttttatgaca gttagccaga cagcaaaaaa atgtgaacat tgtggacatg
     1381 aattcaaagt agaagtaaaa ccaatgcaag ttgatgaggc agcagagcta caagaaataa
     1441 cagaagcagt ttttaaagtg aattatagta gtccaagcga atgtacgaac atgaaagaat
     1501 tatatgaata tgcaaaagaa cacaattata aaagaggatg ggcattccat caaggaaaag
     1561 caagaggatt tatcaaataa aaacgaaaga aggaatttaa aaatgtttaa agtagatcat
     1621 aatgatgttt tcacaaatgg agtagaaaat ggtacgtatg aggtggtttt atacaacgca
     1681 aatgaagatg cgacaaaaaa cggagcggag ttcattaata ttgatttaat tattcgtaat
     1741 gatgtaaatc aaaaattcca gaatgcgcat atttttcacc gagtatggaa agcaaaagca
     1801 acaaatgaat atagtcaaac ggcattaaat acaatcgcta aagcaatcca attacctaac
     1861 ggcaaagatt ataatacatt ggatgaatta ttaaaagacc tgttaactaa gacatgccaa
     1921 gttactgtga aaaatgaaga gtctgagtat aatggtcaaa tttataaaaa tttaaatgtg
     1981 aaagcatggg ctgaaagtaa aattaccgga ccattacaac atgtatttaa aaagaaagaa
     2041 aatgaattac caccagtgga agtaaacgag agtaatctac cgttctaagc aatgagagga
     2101 gcgcacaaac gtgtatgaac aaattccgga cgaattaaaa aaattaaaac aatggtgcgc
     2161 ttttcaactt gtttgggatg aagagcgtgg caaaaacaaa aaaataccga tgaacgcaaa
     2221 caacggttca tacggtaata gtgtagacga gcggacatgg gcagattttg aaactgccct
     2281 tgattccctt gaaaaatatc aatttgatgg gttaggtttt tactttaaga aaccatattt
     2341 tggtgtggat attgatgata taaaggatga aattgaagat tacctttatg gtaatacaga
     2401 aaatattgct ggtgaattta ttcaaacact gtctagttac acagaataca gtgtgagtgg
     2461 gacaggaatt catattattg caaaaggcag ttttccggaa ggtggtcggc gtaaaggaaa
     2521 catcgaaatg tacccggacg gtcgattttt cgttatgaca ggtcaagtaa ttgataacta
     2581 cagacaagtc aatgaagcga cgtctgcaat acaatatttg catacgaaat acattgggac
     2641 taatgaagta agacaaataa ataatttaca atctacagtt gatttgcctg taagtgatat
     2701 tattcaacgt gctgaacgaa gtaaacaagg cgcacaattt aaaacacttt acgacggatt
     2761 atgggatgga ttatatccct cacaatccga agcagactta gcttttgcaa atatgctggc
     2821 attttggaca ggatgtaatg cagaaaaaat ggacgaaatt ttccgttcaa gtggtttgta
     2881 tcgaacaaaa tgggaccaaa aacgtggagc gcaattatat ggagaaatgg ttattaataa
     2941 agcgattgcc aatacgtcag aggtttatca accaggaagt gatttagaag gttactcgat
     3001 cactgtgaaa aatcagaatc gaactgctcg aaaagtatat ggtttagatg atactggaaa
     3061 tgcagaacgt ttccgtgata aatttcatga cattgttcgt ttttcataca ttaacaaagg
     3121 attctatttc tacgattcga aagtttggaa atatgacaac ataggcgctg taaaaacact
     3181 tgttgatgat gtgatcaaag atatgaagag tgagtttgct tacatggaaa atgaatcaga
     3241 tgcagaaaaa gcatttatga aacatttaaa agcaacaaga agcaacaaag gtaaaacgaa
     3301 tatgttaaaa gaagcacaac atttaatgcc agttttgcct gatgaattcg atcgctacaa
     3361 atattttttg aacacacaaa acggatatat caatttgcaa aatggagaac ttatcaatca
     3421 tgacaggcaa aaaatgttta caaaaattag caacatcgaa tatacagata aaattgatgc
     3481 gccactttgg caagcgtttt taaaggatat ttttgctggt gataaagagt taatcgatta
     3541 tattcaaaaa gcagtcggtt attcattatc aggatccacg tcagagcaag tcatgtttat
     3601 ccttttcggc aatgggcgaa atgggaaatc ggtttttctt gatattatca acgatatttt
     3661 tggttcctat gcgaccaaca tccagccaca gacaatcatg gtcaaacagc agtctagtaa
     3721 tgcaaacagt gatattgccc gtttacatgg cgccaggttc gttacaacca ccgaaccaaa
     3781 tgagggtgta cgtttagatg aaggactagt taaacagctc acaggtggcg acaaggtcac
     3841 tgcacgacac ttgtataagg acgaattcga gtttacaccc gaattcaaaa tctggatggc
     3901 aaccaaccat aaaccaatta tccgagggag agacgatgga atatggcgaa gattacactt
     3961 agtaccgttt accgtgaaga tacccgatga aaaggtagac aagcagttaa agtataaact
     4021 tcgaagcgaa ctcactggaa tattgaattg ggcggtcgag ggctttctta aatggcaacg
     4081 agaaggttta ggaatgccga aagcagtaga aaaagcaagc tccgaataca agtcagaaat
     4141 ggacgttatc actgcattta ttgaagactg ttgcgaaaca ggcgagaaca aacagatcaa
     4201 tgctaaaact ctctacgaaa catatagaga gtgggcgaga gacaatggac agtatttaat
     4261 gagcagcacg aaatttggta aggaaatggg tttgaagttt gagaagaaga ggagtaacgg
     4321 acaaactgca tataaatgca taactttgaa taaagaatac aatcctatga acaaaccatt
     4381 cttttcaaca agttattagc agtgcaggtt catctaaact tgcactgtgt ggaatgtatt
     4441 gcagcagaac gagtttgacg gttttagtta gttgacagtg caggtttgcg ccaaaatcca
     4501 taaacttctc tataaaaatt tttcctagga aacttttctt attttactac taacttgcac
     4561 tattaataaa aaaagtatta ataaagtaag tgatagcaat ggatttggga cagtgcaggt
     4621 ttgaaccaac ttgcactaaa cttgcactga cctgcactgt tttagctaat aatttagcga
     4681 tttttaatca acacataaca tatgttcgta tttttgagga aggagcaatt ccatgacagc
     4741 agaaatggat atacagaatt ctatacgttt agaactttcc cgccatgggc attacgtttt
     4801 ccgtgccaat gttggcaaag tgaaattacc aaacggacga atatttgata caggattacc
     4861 gaaaggtttt ccagatttat tcggatttcg cggaacagat ggaaaaatgt tttttattga
     4921 agtgaaaaat gagataggga agttacgaca agaacagaaa aactttcaac aagcgatgga
     4981 aataacgcca gctatctgtg gagtagcaag aagtgctgca gaagccgtgc gaattgtgga
     5041 ggaggggtaa aatgaagcta agagatatta caaacagtaa atgcgatgtt agggagtata
     5101 tgaatgttga ttttccagat tggcttttag aacaactaaa ggacgaaata gattttgata
     5161 ttattgaggc gttaaaagag tatgccgtta tctatgtgaa gcataatgcg ctggaaaaag
     5221 aaatagaacc ttttgatatt tataaaaaag tagaggaggg gtaaaaaatg aagagcgacg
     5281 attaaagatg tgatgaattt agagaccaag gcagtcaaaa tcaatggaaa gactgcacgg
     5341 gtttatcaga agtgttaatt gtgtatttat taggaaa
//
LOCUS       DASDYK010000145         5362 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.145, whole genome shotgun sequence.
ACCESSION   DASDYK010000145 DASDYK010000000
VERSION     DASDYK010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5362)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5362)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5362
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.145"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            180..4940
                     /locus_tag="U0308_002654"
     CDS             180..4940
                     /locus_tag="U0308_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cna B-type domain-containing protein"
                     /protein_id="HEM2317609.1"
                     /translation="MLKHNWQKVFVVMVAVALIFQLVPWSNIFAGAEENQTKTTQQIA
                     QSDEQKGADENKTTVTSDNRETTKNLVNGKQLLKGSVDWNFTNKVTDANGNTKQTYAP
                     GDSLKFSISLAIPSYSESVLDETYTFWIQKDFFQGDKVTFVNPAIDGLTPRQNVFTDD
                     SMKNSIGTKTINGVEYIGYTLKFNQSPEALAKYEDEPLTNAKFDMFATINTTITTKDD
                     YKAIVIEDDKDVDISNIEVPVTPPTPDTDNGVLTASKAIDSAWRLDKDTGKYLKVATS
                     STNYTPEKDDLVFYYVYATNNSAENAVLEKMVDELPAGFSIITEGSPEWQALSTASGS
                     SLQRGWVASADQTNLAPGATRYELPFSPAQTISKNGGGIYKTIAAKVTDPTKDLTNVT
                     KSPTKGGEGKSGSVTPSGKDVYDMAITTKISSTYDKNNKYIGAVSSTTTPVSISEGST
                     VGVTYTAINQGNYTKDVVVYAYVPAGYELNNDTSDFKTTNDKWKYETTVPSGGGVWSD
                     IKVYSITLSGGMASGATATATMYMKAIGMPDDGTYSAVDFYMAGEIGSFSNFNGDSTL
                     DGAITDVDSTPDMNPGNDLISNVDGSTVKPIDGFQKEKPHVVKENAKSTATLQDEDDF
                     DFDYVTFIKTPEVIPSEGKVFEKTRLSAADAEKTARNMIGSDIMGSALKDYTPLADDG
                     RITSPKTYMVYEMNINPSGVEDTLNSSFTDTLPKGLKMLEYDIAGLNSSNKHIYGFTT
                     NKFEGTPKFTNADGQDVIVYQKGLYSEKQVCIANPTLNDVGVRYFGNNADKMGVTGSV
                     TKDARTLTLNFGQPAADPMYSETKAAYKVYMIVVIDPDEIDYSSIMQNKATYTYNDKV
                     ITSYENSEMYWDAGGGTAYAKKYVLDNKTNAYLSGSQYNVATPDADGNLSVGYKIRVR
                     SAYEFDKSSINIGDIIAADNFKSISNVEVNGYEASPNTGFQIDGELENPVPLAADKYA
                     VEAKATANTLDITNPVDIPQMQLYNVLFKVNYQKVKYGAKLVNQAAGSEVATVVPLNL
                     NLLKQDDISKTALTGYEFKAYYADENGKADLTKPVKDTNSNEIVMTDSSGAANFIPTG
                     YKTTSKNQEWKVVLVETKTPTGYESNENKEYPVTVKSDANGNLSIPATTETNLEITNN
                     DHGATTATIDNHADVKMIDVNGAKTWTGDTEADRPDSIEVQLLQDGVAYGSPITVTKA
                     DDWKYEFKNVPETNADGNKYTYTVLENTVTNYTSAVTGLDINNTLIKPDVKMINLDGQ
                     KTWKNDTENDRPASIEIQLQQNGQDYGFPVTVTKDNDWKYEFKNLPETTNDGAAYNYT
                     IVEKAVPGYATKVDGMNVINTKIDAPKTTVSGEKTWKNDTAKDRPDYIEVQLLQNGQT
                     YGDPVKVTKENDWKYSFKDLPKTDANNNAYRYSVTEIAVPGYKTTTDGMNLTNTKVTD
                     EKNVTTASGTKTWVGDNEKTRPASIEVQLLQNGKAYGTPIKVTAKSNWKYNFTNLPEK
                     DKTGEKYSYTVSEKQVSGYSVKVKGMDLTNTKVTKTTPKDTPKNTPKDTHSTNKPSKT
                     KKLPGTGDTNGMLLFAGGLVLLFLGLHLRRKSTK"
     gene            5037..5312
                     /locus_tag="U0308_002655"
     CDS             5037..5312
                     /locus_tag="U0308_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317610.1"
                     /translation="MKEELLQAIEVGEPVLLVTAIGYIVGIVETKGELIRLNDVYINC
                     VSASRVNRFSRGLAVNVNQVIGMQLLSKSEKDEMIGGWKAYVAPTAG"
BASE COUNT         2031 a          977 c         1031 g         1323 t
ORIGIN      
        1 gaactgtaaa tatggcggaa acgtcacaat tctctttact atataggcag ttttgtctga
       61 ttggcttgtt ccagaaagcc attttagcga gtatgatact tttaagaaaa ctattcaagt
      121 agaacaaaaa aagtctacta tgagtaattt caataattag tagcaaaagg agaattatca
      181 tgctaaaaca caactggcaa aaagtattcg ttgtaatggt tgcggttgcg cttatttttc
      241 aattggttcc gtggtctaat atcttcgccg gagcagaaga aaatcaaaca aaaacaaccc
      301 aacaaatagc acaatcagat gaacaaaaag gagcagatga aaacaaaaca accgtaacat
      361 ctgacaatag agagacaact aaaaatctag ttaatggaaa gcaattacta aaaggctctg
      421 ttgactggaa ttttacaaat aaagtaactg acgcaaacgg gaatacaaaa caaacttatg
      481 caccgggaga ctcactcaag ttttcaataa gtttggcaat cccatcctat tcagaatcag
      541 tattggatga aacttataca ttttggatac aaaaagactt ctttcaagga gacaaagtaa
      601 catttgttaa tccagcaatt gatggattaa caccgagaca aaatgttttt acagacgact
      661 ccatgaaaaa ctcgattgga acaaaaacaa taaatggtgt cgagtatatt ggttacacgc
      721 tcaaatttaa ccaaagccca gaagccttgg caaaatatga agatgagccg cttactaacg
      781 ctaaatttga tatgtttgca acaataaata cgactattac aacgaaagat gactataaag
      841 ctattgtaat tgaagatgat aaagacgtag atattagtaa tattgaagtc cccgtgacac
      901 caccaactcc cgatacagat aatggtgtac tcaccgcgtc taaagcaatc gattctgctt
      961 ggcggttaga taaagacact ggaaaatatc ttaaagtcgc tacatcatct acaaactata
     1021 cacctgaaaa agatgatcta gttttctatt atgtgtatgc tacgaacaat tcagcggaaa
     1081 atgccgtttt agaaaaaatg gtagatgaat taccagctgg tttttccatt attacggaag
     1141 gctcaccaga atggcaggcg ttatcaactg catctggctc ttcgcttcaa cgcggctggg
     1201 tagcttcagc agaccaaaca aaccttgccc ctggcgcaac taggtacgaa ttaccatttt
     1261 ccccagctca gacaatctcc aaaaatggtg gcggtattta taaaacgatc gcagcaaaag
     1321 taacagatcc aacgaaagat ttgactaatg ttactaaaag cccaactaaa ggcggcgaag
     1381 gtaaatctgg ttctgtaacg ccaagtggga aagatgttta tgacatggca attacgacaa
     1441 aaattagttc cacttacgat aaaaacaata aatatattgg tgctgttagt agcacaacta
     1501 cgcccgtttc tatatcagaa ggaagcacag ttggcgtaac atatacagcg attaatcaag
     1561 ggaattatac aaaagatgtt gtcgtttatg cctatgtacc agcaggttat gaactaaata
     1621 atgatacatc tgatttcaaa actacgaatg ataaatggaa atacgaaaca accgtaccta
     1681 gtggtggcgg tgtgtggagt gatatcaaag tttactccat tacactttct ggaggcatgg
     1741 catcaggtgc aactgcaact gcgaccatgt acatgaaagc tatcggcatg ccagatgatg
     1801 ggacttatag cgcagtagac ttttacatgg ctggagaaat cggttcattt tctaacttta
     1861 atggtgattc tactttagac ggagcaatta ccgatgtaga ttcgacgcca gatatgaatc
     1921 caggaaatga tctgattagc aatgttgatg gttctactgt aaaacctatt gatggcttcc
     1981 aaaaagaaaa accccatgtt gtaaaagaaa atgctaaatc aacagcgact ttacaagatg
     2041 aagatgattt cgattttgat tatgttacgt tcattaaaac accagaagta attccatcag
     2101 aaggaaaagt gtttgaaaaa acacgtctat cagcagctga tgcagaaaaa acagcgcgca
     2161 atatgatagg tagcgacatc atgggttctg ccttgaaaga ctatacgcct cttgccgacg
     2221 atggtagaat tacttcacca aaaacatata tggtctatga aatgaacatt aacccatctg
     2281 gagtagaaga cacactaaat tcttcgttca cagatacact tccaaaagga ttgaaaatgc
     2341 ttgaatatga tattgctggt ttaaattcta gcaataaaca catttatggt tttacaacga
     2401 acaaatttga aggtacaccg aaattcacaa atgcagacgg acaagatgtt attgtttatc
     2461 aaaaaggctt atattccgag aaacaagttt gtattgccaa ccctacttta aatgacgttg
     2521 gagtaaggta tttcggaaat aacgcggata aaatgggtgt aactggttcc gtaacaaaag
     2581 atgcacgtac actaaccctt aattttggac aaccggcagc tgacccgatg tatagtgaaa
     2641 caaaagcagc ttataaagtg tatatgattg tggtaattga tccagacgaa attgactaca
     2701 gcagtatcat gcaaaataaa gcaacataca cttacaacga taaagttatt acttcttatg
     2761 aaaatagcga aatgtactgg gatgctggtg gcggtacggc ctatgcgaaa aaatatgttt
     2821 tagataataa aacaaatgca tatttaagtg gaagccaata taatgtagct actcctgatg
     2881 cagacggtaa tttgtcagtt ggctataaaa ttcgagtaag aagtgcctat gaatttgata
     2941 aatcatctat aaacattgga gatattattg ctgcagataa ttttaaatct atctctaatg
     3001 tagaagtaaa tggttatgag gcaagtccaa acacgggctt ccaaattgac ggggaacttg
     3061 aaaatcctgt accacttgct gcggataagt atgcggtaga agcaaaagca actgcaaaca
     3121 cattagatat cacaaaccca gttgacattc cacaaatgca actatataac gttcttttca
     3181 aagtgaatta tcaaaaagtg aaatacggcg cgaaactagt taaccaagca gcagggtcag
     3241 aagttgcaac tgttgttcca ttaaacttaa atcttctaaa acaagatgat ataagcaaaa
     3301 cagcattgac aggctatgaa ttcaaagctt attatgcaga tgaaaatgga aaagcagatt
     3361 taacgaaacc ggtcaaagat acaaatagta atgaaattgt tatgacagac tcatccggcg
     3421 cagcaaattt catcccgaca ggttataaaa caacttctaa aaatcaagaa tggaaagtag
     3481 ttcttgttga aacaaagaca ccaactggtt atgaatcaaa tgaaaataaa gagtatccag
     3541 ttacagtgaa aagcgatgcg aatggcaact tatccattcc agccactaca gaaacaaacc
     3601 ttgaaatcac caataatgat cacggcgcaa caacagcgac tattgacaac catgcagacg
     3661 tgaaaatgat tgatgtgaat ggcgcgaaaa cttggactgg tgacacagaa gcagatcgcc
     3721 cagattccat cgaagtacaa cttttgcaag acggtgtagc atacggtagc ccaattactg
     3781 taacaaaagc agacgactgg aaatacgaat tcaaaaatgt tccagaaaca aatgcagatg
     3841 gaaataaata cacgtataca gttttagaaa atacagttac taactataca agtgctgtca
     3901 caggtcttga tattaacaac acgttaatca aaccagatgt aaaaatgatt aatcttgacg
     3961 gacaaaaaac atggaaaaac gatacagaaa atgaccgtcc cgcatccatc gaaattcaac
     4021 tgcaacaaaa tgggcaagat tacggtttcc cagtaacagt tacaaaagat aacgattgga
     4081 aatacgaatt taaaaaccta ccagaaacaa ccaatgatgg agcggcttac aattacacga
     4141 ttgtcgaaaa agcagttcca ggctatgcaa ccaaagtcga cggaatgaac gtcatcaaca
     4201 cgaaaataga tgcaccaaaa accactgtct ctggtgaaaa aacatggaaa aacgacacag
     4261 ccaaagaccg tccagactat atcgaagtac aacttttaca aaatggacaa acttatggtg
     4321 atccagtcaa agtaacgaaa gagaacgact ggaaatatag cttcaaagat ctacctaaaa
     4381 ccgatgctaa caacaacgct tatcgttact ctgttactga aatagcagtt ccaggctaca
     4441 aaacaaccac agatggaatg aacttaacca atacaaaagt aaccgatgag aaaaatgtaa
     4501 ctacagcgag cggcacaaaa acttgggtgg gagacaatga aaaaacacgt cccgcatcca
     4561 tcgaagttca acttttacaa aacggtaaag catacggaac accaatcaaa gtaacagcaa
     4621 aatcgaattg gaaatacaac tttaccaacc ttccagagaa agacaaaaca ggtgaaaaat
     4681 acagctatac tgtatctgaa aaacaagtat ctggctatag tgtaaaagta aaaggtatgg
     4741 acttaacgaa tacaaaagta acaaaaacga caccaaaaga tacaccaaaa aatacaccaa
     4801 aagatacaca ttctaccaat aaaccaagta aaacgaaaaa attacctgga actggtgata
     4861 cgaatggtat gttgctattt gctggtggat tagtactatt attcttaggt ctacacctta
     4921 gaagaaaaag taccaaataa agaaaacagc cgatccgagt aagcttggat cggtttttct
     4981 tttgaataaa gttaaaatcg ggtatacaaa taaaaatgaa ataagggggc ttcatgatga
     5041 aagaagaatt actgcaagca atcgaagtcg gcgagccagt tttacttgta acagcaatcg
     5101 ggtatattgt aggaattgtg gaaacaaaag gagagcttat tcgcttaaat gatgtgtata
     5161 tcaattgtgt ttcagctagc agggtaaatc gtttcagccg aggcttagct gtgaacgtca
     5221 atcaagtcat cggtatgcaa ctattaagta agtcggagaa agacgaaatg attggcggct
     5281 ggaaggcata cgtggcacct acagctggct aagctatgat ataatataaa cagcacttac
     5341 ggaggtctga acgaatgata tt
//
LOCUS       DASDYK010000146         5185 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.146, whole genome shotgun sequence.
ACCESSION   DASDYK010000146 DASDYK010000000
VERSION     DASDYK010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5185)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5185)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5185
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.146"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..279)
                     /locus_tag="U0308_002656"
     CDS             complement(<1..279)
                     /locus_tag="U0308_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317611.1"
                     /translation="MLFKVALTNMRKNFNQYIVYFVSLIVCVLVFFTFVSLSYNPLID
                     TVFKRWELFGPAMFSSASLMLILFIIFFIFYSNGFFLKRRKREIGLYSL"
     gene            complement(269..1036)
                     /gene="virB"
                     /locus_tag="U0308_002657"
     CDS             complement(269..1036)
                     /gene="virB"
                     /locus_tag="U0308_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein VirB"
                     /protein_id="HEM2317612.1"
                     /translation="METVLKAHKVRKVYGSKGNLFSALGSISLEIQKGSFVGIMGPSG
                     AGKSTLLNVLSSIDKPTSGEIEIGGKQISTMNGKELAVFRRDQLGFIFQDYNLLDTMT
                     VKDNIVLPLALARIKQAEIDQRFEIIARQFGIFELRNKYPTEISGGQKQRTAVCRAMI
                     TEPTLIFADEPTGALDSKAATNLLEGLSQAKDVRDSTIMMVTHDAFAASYCERIMFIK
                     DGEIFTEIYRGTSSRKQFFQKVLDVLALLGGGENDVI"
     gene            complement(1165..1674)
                     /locus_tag="U0308_002658"
     CDS             complement(1165..1674)
                     /locus_tag="U0308_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317613.1"
                     /translation="MIENELEHAKKMEKIEFGVNRRLIFSSCLLWMAVGLLLYVVFSH
                     IKGVNGIEEMILLVFIGLCVLRPLFRLINIAPTVELTERGVAYRGDFKSWNEIKKTEL
                     KKPAMMLFSQGRLKIMTSINGREEVAWDIVAADVSISLEELEKLIQSMRSTYTNDETI
                     GMEIFVEKK"
     gene            1898..2371
                     /locus_tag="U0308_002659"
     CDS             1898..2371
                     /locus_tag="U0308_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009926778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEM2317614.1"
                     /translation="MGAGKTTVGNILANLADLPYIDIDEVITSEQGMSVSDIFAKYGE
                     KEFRRLEHEKLKELATTKAVIATGGGIVLNPENREVLKNTYPVIYLETDPEVFMNRLK
                     GDTTRPLVQQKTAEEIRAIFEPRIAHYQDSADFIVNTDNRNQEEVARAILTMLDK"
     gene            complement(2402..2956)
                     /locus_tag="U0308_002660"
     CDS             complement(2402..2956)
                     /locus_tag="U0308_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate metabolism regulator"
                     /protein_id="HEM2317615.1"
                     /translation="MAITMYIDQPGASLNYETTHPHFKEHFKASFYLDGQDSYGPFGY
                     KDGLEVLRRLEEYFSDKSDQGLNLSSFPKYMMETVKKANYVPAKDDGVERLKQLLAEF
                     GSDVRASDRITVSAALAQIKITGYILPALRDAALESLHREIELNKIENIDAGYADSMF
                     YDLLTFTKDYTSVLPDMWCRHCTE"
     gene            complement(3291..4652)
                     /gene="rlmD"
                     /locus_tag="U0308_002661"
     CDS             complement(3291..4652)
                     /gene="rlmD"
                     /locus_tag="U0308_002661"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HEM2317616.1"
                     /translation="MEASLLKKNQSIELTIEDLTHDGSGVGKIDGYPLFIPNTLPGEK
                     VTAKIIKLNKNYGFARMETIESVSADRVEPPCAVYSKCGGCSLQHLSYEGQLAFKRNQ
                     VEETMKRIGKLNVDVPETLGMENPWRYRNKSQVPVGFVNGKLTAGFYQKRSHAIIDMS
                     TCLIHNEQGDFAVQKTREILAKYGTEPYDEQTGKGDIRHIMTRFAHTTGQLMIVLVTT
                     KERMPFKEEIVRELVEQLELTSIVQNINPHKTNVIFGDRTKTLWGKDIIEDTIHGIRF
                     AISARSFYQVNPIQTEVLYQQAIDAAELTGEETVIDAYCGIGSISLCLAKKAKHVYGV
                     EIVDQAIQDARANAELNELANTTFETGKAEEVIPAWYKAGIVADVLVVDPPRKGCDEK
                     LLETILAMKPKKVVYVSCNPGTLARDMKILTDGGYVAKKVQPVDMFPMTTHIEAVTVL
                     HLN"
     gene            complement(4676..>5185)
                     /locus_tag="U0308_002662"
     CDS             complement(4676..>5185)
                     /locus_tag="U0308_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317617.1"
                     /translation="DLILETTNEEILNELASSDNRYKGIKAYRLRIEAKKVSEYITNT
                     KYRYPTTTIQKKFANYEITSGERSVQTEKTPVKIEDTTNNNIKVSLKTSYSSDDAEVA
                     AGIFNSQIPEETTITDNTKALTTNKNVTIYPKTFIYDFTLQKNTMLVFKEQEEAVIKE
                     PIGIEYIIK"
BASE COUNT         1579 a         1028 c          816 g         1762 t
ORIGIN      
        1 taatgaataa agccctattt ctcgttttcg ccttttaaga aaaaaaccat tggaataaaa
       61 tataaaaaag ataataaaca atattaacat gagactagct gacgaaaaca tggccggtcc
      121 gaataattcc caacgtttaa acactgtgtc aatcagcggg ttatatgata acgaaacaaa
      181 cgtaaaaaaa actaatacac aaacaattaa cgaaacaaaa taaacaatat attgattaaa
      241 gttctttcgc atattggtca gcgcgacttt aaataacatc gttttcgcca cctccaagaa
      301 gcgccaaaac atctaatacc ttctggaaga attgttttct agaacttgtc cctcggtaga
      361 tttcagtgaa aatttcgcca tctttaataa acataattct ttcgcagtaa ctggctgcaa
      421 aagcatcgtg cgtcaccatc ataatagtgg aatcacgcac atcttttgct tgagaaagtc
      481 cttctaataa attggtcgct gctttggaat caagcgcacc agtgggttca tccgcaaaaa
      541 tcagcgttgg ttctgtaatc attgctcgac aaaccgctgt tcgctgcttt tgtccaccag
      601 atatttcggt tgggtacttg ttccttaact caaaaatccc aaattgacga gcaataattt
      661 caaaccgctg atcaatttcc gcttgtttaa tacgagcaag agccagcggt agaacaatat
      721 tatccttcac agtcatcgta tctaataaat tatagtcttg aaatataaaa ccaagctgat
      781 ctcttctaaa aacagctaat tcttttccgt tcatagtaga aatttgcttt ccaccaatct
      841 caatttctcc agaggttggt ttatctatag aagacaatac atttaataaa gtagatttac
      901 cagcaccaga gggacccata atgcctacaa aggaaccttt ttgtatctct aaactaatac
      961 ttccaagcgc agaaaacaaa tttccttttg aaccgtatac ttttctaact ttatgcgcct
     1021 ttagcactgt ttccattgta ttcctcccgt tacgttcttt atttggttat tttaccttaa
     1081 ttttaaacaa gatactatgg gctatagttg tatttattaa aaaatcattt atccgtcaaa
     1141 aaaacagata aatgattttc cttattattt cttttccaca aagatttcca taccgatagt
     1201 ttcatcattt gtataagtgg aacgcatcga ctgaatgagt ttttctagtt cctccaaact
     1261 aatagaaaca tccgcagcaa ctatgtccca tgccacttct tcccgcccat ttatcgatgt
     1321 cataattttt aatctacctt gcgaaaaaag catcattgct ggttttttca gttctgtttt
     1381 tttaatttca ttccatgatt taaaatcacc acgataagca actccacgtt ctgttaattc
     1441 tacggtggga gcgatattaa ttaaccgaaa caatggacgt aacacacaaa ggccgataaa
     1501 tacgagtaaa atcatttcct ctatgccatt tacacctttg atatgactaa aaacaacata
     1561 aagtaataat ccaacagcca tccaaagtaa acaacttgaa aaaatcaaac gtcgattgac
     1621 cccaaattcg attttctcca ttttctttgc atgttctagc tcattttcta tcattatttt
     1681 cctccagttt tacagctcta ttatttctat tgtactaaaa atatactaca atgggaagaa
     1741 ggcattcatg tagcttttta ttttaaagaa atcagcctac tttcagttga cctttttggc
     1801 atttgtgata taatttcttt aatgctttta agtagtaaaa tgtaataatc caataaagga
     1861 ggagaacatc atcgatcaag ttatcttaat aggcttcatg ggagctggaa aaacaacggt
     1921 tggaaatata ctcgcaaact tagctgactt accgtacatc gatattgacg aagtaattac
     1981 aagcgaacaa ggaatgagtg tatcggacat ttttgctaaa tatggtgaaa aagaattccg
     2041 ccgtctagaa catgaaaaat taaaagaatt agcaacaacc aaagccgtta tagcaacagg
     2101 cggtggcatt gttctcaatc ctgaaaatag agaagtttta aaaaatacat atccggttat
     2161 ttatttagaa acggatcccg aagtatttat gaatcgctta aaaggcgaca ctacacgtcc
     2221 gcttgtacaa caaaaaacag ccgaagaaat tcgcgctatt tttgaaccta gaattgctca
     2281 ctatcaagat tctgcagact ttatcgttaa tacggataat cgtaatcaag aagaagttgc
     2341 tcgagctatt ttaaccatgt tagataagta aaaaaacaac gctaatttta gcgttgtttt
     2401 tttattctgt acaatgtctg caccacatat ctggtaacac agatgtatag tcttttgtaa
     2461 aggttaataa gtcataaaac atactgtccg cataacctgc atcaatattt tctattttgt
     2521 tcaattctat ttcgcgatga agtgattcca gcgccgcatc acgaagagca ggtaaaatat
     2581 agcccgtgat tttgatttga gctaaagctg ctgagacagt aattctatca gatgcacgta
     2641 cgtcactgcc aaactcagcc aaaagttgtt tcaatcgttc tacaccatcg tctttcgctg
     2701 gaacatagtt tgcttttttc actgtttcca tcatgtattt tggaaaagac gataaattga
     2761 gtccttgatc acttttatca ctaaaatatt cttctaaacg tcgaagtact tcaagtccat
     2821 ctttataccc aaatggacca tagctatcct gaccatccaa ataaaaactc gctttaaaat
     2881 gttccttgaa atgtggatgt gttgtctcat aatttaacga ggcaccaggc tggtcgatat
     2941 acatagtaat tgccattctc atttcctcca ttcatgtgaa atctcataca ttcatcttac
     3001 cagactatct acctttttga aagaagaaaa aaaggtgaca atttcatgac aattttaagg
     3061 atgattttcg cttttattgt gttttaatta actatataag ataaaattag ttaattaaat
     3121 tggttctatt ctcataaaag ttaatttttg ctcttttgac catttattta tttcgtggtt
     3181 aaataaaact ggacttggtt tttattaatc tcgtctgtta atttattagt caaccacaca
     3241 ctcgaaaagc aaaaaccgcc atttatccca ttatggcggt ttttgtatac ttaatttaaa
     3301 tgtagaacag tcacagcttc tatatgtgtt gtcattggaa acatatctac aggctgaact
     3361 tttttcgcta catagccgcc atccgttaag attttcatat cacgggccaa tgtccctgga
     3421 ttacaagaaa catatactac tttttttggt ttcattgcta aaattgtttc cagtaatttt
     3481 tcatcgcacc cttttcgtgg tggatcgaca actaagacgt ctgctacaat tccagctttg
     3541 taccacgccg gaataacctc ttctgctttc cctgtctcaa aagtagtatt cgctaattca
     3601 ttgagttctg catttgcacg agcatcttgt atcgcttgat ccacaatttc taccccgtag
     3661 acatgcttgg cttttttcgc gagacaaaga gaaatagaac caatgccgca ataggcgtca
     3721 atcactgttt cttctcctgt taactcagcc gcatcgattg cttgttgata caaaacttct
     3781 gtttggattg ggtttacttg ataaaatgaa cgagccgaaa ttgcaaatcg aataccatga
     3841 atcgtatcct caatgatatc ttttccccaa agtgttttcg tacgatctcc aaaaatcaca
     3901 tttgttttat gtgggttaat attttgaacg atagaagtta gttcaagttg ttcgaccaat
     3961 tcccgtacga tttcttcttt aaatggcata cgttcttttg ttgttacaag gacaatcatt
     4021 aactgtccag ttgtatgcgc aaatcttgtc ataatatggc ggatatcgcc ttttcctgtt
     4081 tgttcatcat acggttctgt tccgtattta gctaggattt cacgtgtttt ttgaacagca
     4141 aaatcgcctt gctcattgtg aattaaacaa gtggacatat cgataatggc atggcttctt
     4201 ttttggtaaa aacctgctgt taacttacca ttaacaaatc ctactggtac ttgtgattta
     4261 ttccggtagc gccacgggtt ttccatgcct aacgtttctg gaacatctac attaagtttc
     4321 ccaattcgct tcatcgtttc ttccacttga tttcgcttaa acgcaagctg accctcgtag
     4381 cttaagtgtt gcaagctaca accgccacat ttggaataaa ccgcacatgg aggttctacg
     4441 cggtctgcac taaccgattc aatagtctcc atccgagcaa agccgtaatt tttattgagc
     4501 tttattattt tagctgtcac tttttcgcca ggtaacgtat ttggaatgaa aagtgggtat
     4561 ccgtcaattt tgccaacccc actgccgtca tgcgttaaat cttcaatagt aagttcaatg
     4621 gattggttct tttttaaaag ggatgcttcc aaagtccctt gcccctctct ttgctttact
     4681 taataatata ttcgatgccg attggctctt taattactgc ttcttcttgc tctttaaaaa
     4741 caagcatggt atttttctgt aacgtaaaat cataaataaa tgtttttgga tagatagtga
     4801 catttttatt cgtagtcaac gcttttgtgt tatctgtaat agtcgtttct tctggaatct
     4861 ggctattaaa aataccagct gcgacttcag catcatcact tgaataactt gtctttagag
     4921 atactttaat attattgttt gttgtgtctt ctatttttac aggtgttttt tctgtttgta
     4981 cagaacgttc accacttgta atttcatagt ttgcgaattt tttctggata gttgttgttg
     5041 ggtaacgata ttttgtatta gtaatatact cagaaacttt cttcgcttca atacgaagtc
     5101 gatatgcttt gataccttta taacgattat cggaagaagc taattcattt aaaatttctt
     5161 cattagttgt ctctaaaatc aaatc
//
LOCUS       DASDYK010000147         5141 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.147, whole genome shotgun sequence.
ACCESSION   DASDYK010000147 DASDYK010000000
VERSION     DASDYK010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5141)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5141)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5141
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.147"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(67..186)
                     /locus_tag="U0308_002663"
                     /pseudo
     CDS             complement(67..186)
                     /locus_tag="U0308_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464788.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
     gene            337..732
                     /locus_tag="U0308_002664"
     CDS             337..732
                     /locus_tag="U0308_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2317618.1"
                     /translation="MPNLSNRLTLLREKQGWSKAETARRLGLKAPSTYGNWEYGIREP
                     DLEMVTQIATLYDVSVDYLLGQQSIPTYAPSELQNEKDIGKRITKISEDLKYEDDLNL
                     DGQPLNESAAAFLADSINFLYEQAKKIND"
     gene            812..1951
                     /locus_tag="U0308_002665"
     CDS             812..1951
                     /locus_tag="U0308_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family intramembrane metalloprotease"
                     /protein_id="HEM2317619.1"
                     /translation="MSEWYFKKNEQKMGPFTNVEMIALYRKKEINNLTLVQKSPHPEW
                     IAFKQTELYQHIGNHGNSELKISNLFSAVFKKHSKEEGEKVFIAGTKYTTPAISDIPH
                     SWPHPWVFSRVFLVLIVTYFLLLACTYLFDNSNTIPGLMVIGSFAVPFSVLLFFFETN
                     APRNISVFDVVRMFFIGGVAALVATLVIYSIIPVGKLNYFNALLVGFIEETGKMIIVA
                     LFIRSLNSKYILNGLLIGAAVGAGFAAFESLGYAFNYSVDAAFLFKDIHIAGETMLNV
                     IFSRGWQSIGGHVAWAAITGAALVIAKGDQKLGMHHIFTGTFWKWFIIPIALHFIWDC
                     PFNPLPAIAFKQIVLIIVVWFVILRLISKGLKQVSVISAASKAAK"
     gene            2098..2928
                     /gene="proB"
                     /locus_tag="U0308_002666"
     CDS             2098..2928
                     /gene="proB"
                     /locus_tag="U0308_002666"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEM2317620.1"
                     /translation="MRESLKNSKRLVIKVGTSTLMYGNGHINLRTIEKLAMVLSDLRN
                     EGKEVILVSSGAIGVGCHKLQLSVRPTSIPDLQAVASVGQSELMHIYSKFFGEYGQVV
                     GQVLLTRDVTDFPISRENVMNTLDSLLSRGIIPIVNENDTVAVEELEHVTKYGDNDLL
                     SAIVAKLVQADLLIMLSDIDGFYGSNPATDPEAVMFSEINQITPEIEALAGGRGSKFG
                     TGGMLTKLSAASYCMDSNQKMILTNGKNPTVIFNIMQGEQIGTLFASKKEELSHDRTH
                     "
     gene            2912..4159
                     /locus_tag="U0308_002667"
     CDS             2912..4159
                     /locus_tag="U0308_002667"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEM2317621.1"
                     /translation="MTELIKKGSGAKEAAQFLAQATTKHKNAALLNLSNDLLIHTATL
                     LQENEKDILRAKQKGTPETMIDRLRLTEERIKEISEAVKQVVALKDPIGEVTNMWKNE
                     AELTIGKTRVPLGVIGIIYESRPNVTVDASVLCFKTGNAVILRGGSDAIDSNKALMSV
                     IQDSLEASGFPRSSVQLIEDTSRETARDMMRLNRFLDVLIPRGGARLIQTVLENATVP
                     VIETGTGNCHIYVDKAAEKQMAIDILVNAKCSRPSVCNAAETLLIHRDVAEDYLPAME
                     TALKEYDVELRADERAKEILQEAKAATESDWEDEFLDFILAIKVVDSAEEAIDHINKY
                     GTKHSEAIISNDYATGQAFHQKVDAAAVYINASTRFTDGFAMGFGAEIGISTQKLHAR
                     GPMGLTELTSTKYIIFGDGQIRN"
     gene            complement(4185..5099)
                     /locus_tag="U0308_002668"
     CDS             complement(4185..5099)
                     /locus_tag="U0308_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2317622.1"
                     /translation="MYKQMKLKATDGLDLHLHIWDEVKNPVGVVQIVHGMAEHGARYG
                     LFAERLNQAGYIVVADDHRGFGKSAIDEASLGHLDGETGFQNMVEDEAVVRTYLKESY
                     PELPYFIFAHSMGSFIIRTFMAKHQVDGVILSGSGLQPIALLKMGQMITKQRVKKDDR
                     KRSGFLNKLAFWGYNKPFNENHRFSWLSRDVAIYEAYEQDPFCGPVVGTSGFFHNLFE
                     AVKVSQQKETLESVPKDLPVLLLSGSDDPVGHFGKDTPKIALSLEKAGVEDVTYKIYE
                     DARHELVNEICKETVFQDVIDWLNEKRR"
BASE COUNT         1593 a          938 c          955 g         1655 t
ORIGIN      
        1 cgaaaataag ttttttataa ataattgtca gtcaatcaaa agaattattt ataggttttt
       61 tgtcaaatac ggtgatgtgt acctatagcc catccgtcgc gcaatgaaag cttgggtgat
      121 tcctcgctgc aaccgtaatt ctcgaatttt tgttgtatta attcttctgg tgtctactgt
      181 tttcatgtca tcttctcctt atctacacaa tttgagttgt taatacaatt ctaacaacac
      241 aatacgacta tgtcaatcag aaaataatac gttatgtgtt aaaatgtagc taaactgagt
      301 aagatattgt ataatcaaac aaaaaggagt gaaattatgc caaatttaag taacagactt
      361 actttattac gggaaaaaca aggttggtca aaagcagaaa cagctagaag gcttggttta
      421 aaagcacctt ccacttatgg caattgggaa tatggtattc gggaaccaga tttagaaatg
      481 gtgactcaaa ttgcaacact ttatgatgtt agtgtcgatt atttacttgg ccaacaaagc
      541 atcccaacct atgctcctag tgaactccaa aatgagaaag atattgggaa aagaataact
      601 aaaattagtg aagatttaaa atatgaggat gatttaaatt tagatggaca accgctaaat
      661 gagtccgcag cagctttttt agctgattcg attaattttc tttatgaaca agcgaagaaa
      721 ataaacgatt agttcctttg ctcgtttaac ttttagcgtt tttgggaata attaatagag
      781 tcaaaataaa aagctaaagg gggagtttca tttgtcagaa tggtacttca aaaagaacga
      841 acagaaaatg gggcctttta caaatgtaga gatgattgct ctatatagaa agaaagagat
      901 taataatctt acattggtcc aaaaatcccc tcatccagag tggattgcat ttaagcaaac
      961 agaattatat caacatattg gaaaccacgg gaattcagaa ttaaaaatta gcaacctttt
     1021 ctctgctgtt ttcaaaaagc actctaaaga agaaggcgaa aaagtcttta ttgctggtac
     1081 taagtatact actccagcaa taagtgatat ccctcattct tggccacatc cttgggtatt
     1141 ctcccgagtt ttcttagtgt taatcgtcac gtatttttta cttctagcat gtacatattt
     1201 gtttgataac agtaatacaa taccgggcct tatggtaatt ggttcatttg cagttccgtt
     1261 ttctgtttta ttattctttt tcgaaacgaa tgcacctcgt aacatcagcg tttttgatgt
     1321 agtgcgaatg ttctttatcg gtggtgtagc agcgcttgtt gcaacacttg ttatttactc
     1381 cattattcca gttggaaaat taaattattt taatgcactt ttggttggtt ttattgaaga
     1441 aactgggaaa atgattattg ttgctctctt cattcgttca ttaaactcga agtacatttt
     1501 aaatggttta cttatcggtg ccgctgttgg ggctggattt gctgcatttg aatcacttgg
     1561 gtacgcgttt aactatagtg tggatgctgc ctttttattc aaagatattc atattgccgg
     1621 tgaaacgatg ctcaatgtta tctttagccg tggttggcag tctatcggcg gccatgttgc
     1681 ctgggctgct attactggtg ccgcacttgt tatcgctaaa ggtgatcaaa aacttggaat
     1741 gcaccacatt ttcacaggaa ctttctggaa atggtttatt attccgattg ctttacattt
     1801 catttgggat tgcccgttca atccgcttcc agcaattgca ttcaaacaaa ttgttttaat
     1861 cattgttgtt tggttcgtta tcttacgact tattagtaaa ggtttgaaac aagtttcagt
     1921 catttctgcc gcgagtaaag cagctaaata aaaaataagt cctaagaaaa tttcttagga
     1981 cttattttta tactcaaaat taaaaatctg aagctcataa acttgattct aatatggaca
     2041 tatctgcatt ttcatgtaaa atagaagtat tatcttatta gcagaggggt catagaaatg
     2101 cgcgaatctt taaaaaatag taagagatta gtcatcaaag ttggtacaag tacattaatg
     2161 tatggaaatg gccatattaa tttacgtact atagaaaaat tagcaatggt tttatctgat
     2221 ttacgtaacg aaggaaaaga ggtcattctt gtttcttctg gggcaatcgg tgttggttgt
     2281 cataaattac agctttcagt aagacctaca agtatccctg accttcaagc tgtcgcgtcg
     2341 gttggtcaaa gtgaactaat gcatatttat agtaaatttt ttggtgaata tggacaagtg
     2401 gttggacagg tgttgcttac acgtgatgta actgacttcc ctattagccg cgaaaatgtt
     2461 atgaatactt tagacagttt attaagccgg ggtattatcc ctatcgtaaa tgaaaatgat
     2521 accgttgctg tagaagaact ggagcatgta acgaaatacg gggataatga tcttctttca
     2581 gccattgtcg ctaaactggt tcaagctgat ttgcttatta tgctttctga tattgacggc
     2641 ttttatggta gtaaccctgc aacagatcca gaggctgtta tgttctctga aatcaaccaa
     2701 atcactccag aaattgaagc ccttgctgga ggacgcggtt ctaaatttgg gactggtggt
     2761 atgttgacca agctttctgc tgcttcttat tgtatggatt ctaaccaaaa aatgatttta
     2821 acaaacggta aaaaccctac cgtcattttt aatattatgc aaggtgaaca aattggtact
     2881 ttattcgcaa gtaaaaagga ggaactttca catgaccgaa ctcattaaaa aagggagtgg
     2941 cgctaaagaa gctgcccaat ttctagcaca agcaacaaca aaacacaaaa acgcagcact
     3001 gcttaattta agtaatgatt tgcttatcca tacggctaca cttttgcaag aaaatgaaaa
     3061 ggacattctt cgcgctaagc aaaaaggaac acctgaaacg atgattgatc gtcttcgtct
     3121 tacagaagaa agaatcaaag agatatcgga agcggttaaa caagtggtcg cgttaaaaga
     3181 tccaatcggt gaagtaacaa atatgtggaa aaatgaagcc gagttaacta ttggtaaaac
     3241 aagagttcca cttggtgtta ttggtattat ttatgaatct aggcccaatg taactgtcga
     3301 tgcttctgtt ctttgtttta aaactggaaa tgcggtgatt ttgcgaggtg gtagtgatgc
     3361 tattgattcc aataaagcct taatgtccgt tattcaggat tcccttgagg catctggttt
     3421 ccctcgttct agtgtccaat taattgaaga tacatcacga gaaactgcta gagacatgat
     3481 gcggttaaat cgctttttag atgttctcat tcctcgtggg ggcgcaaggt taattcaaac
     3541 agttcttgaa aatgcaactg ttccagtcat cgaaacaggt actggtaatt gtcatattta
     3601 cgtagataaa gcagcagaga aacaaatggc tatagatatt ttagttaatg ctaagtgttc
     3661 gcgcccttct gtatgcaatg ctgcagaaac tttgctcatt catcgagatg tcgccgaaga
     3721 ttatcttcca gcgatggaaa ctgcgctaaa agaatatgat gtcgaactac gtgcggatga
     3781 acgtgcgaag gaaattttac aagaggcaaa agctgcgaca gagtccgact gggaagatga
     3841 atttttagat ttcattttag ctattaaagt agtcgattcc gctgaagagg ctattgatca
     3901 tattaataaa tatggcacca agcactcaga agcaattatt tctaatgatt acgcgactgg
     3961 tcaagcattc catcaaaaag tagacgcagc agccgtttat atcaatgctt ctactcgatt
     4021 cactgatggt tttgccatgg gatttggcgc tgaaattggc attagtactc aaaaacttca
     4081 tgcacgtgga ccaatgggct taacagaact tacatccact aaatatatta tttttggaga
     4141 cggtcaaatc cgcaattaaa aagaaggtag cctatgattt taggctacct tcttttttca
     4201 ttcaaccaat caattacatc ttgaaaaaca gtttctttac atatttcatt caccagttca
     4261 tgacgagcat cttcataaat tttataagta acatcctcta ccccagcttt ttctaaggat
     4321 aaagcaattt taggtgtgtc ttttccgaaa tgccctaccg gatcatcact tccagaaagc
     4381 aacaacactg gcaaatcctt tggcacactt tccaatgttt ctttttgttg acttaccttt
     4441 acggcttcaa aaagattatg gaaaaaacca cttgttccaa ctactggacc gcaaaatgga
     4501 tcttgttcat aggcttcata aatcgcaaca tcccgcgaaa gccaactaaa acgatgattt
     4561 tcattaaatg gtttattata accccaaaat gctaatttat ttagaaaacc acttcttttt
     4621 ctatcatctt ttttcactct ttgttttgta atcatttggc ccatttttaa aagagctatc
     4681 ggttgaagtc cgctaccgct gagaattact ccatcaactt ggtgttttgc cataaaggtt
     4741 cgtataataa aacttcccat gctgtgcgca aaaatgaagt aaggtaattc aggatagctt
     4801 tcttttaaat aagttctcac taccgcctca tcttctacca tattttgaaa accagtttct
     4861 ccatctaaat gacctaaaga tgcctcatct atggctgatt tcccaaaacc acggtgatca
     4921 tcggctacga caatatatcc agcctgattc aaacgttccg caaacaagcc gtatcttgcc
     4981 ccgtgttctg ccatcccatg aacaatttga actacaccaa ctggattttt cacttcatcc
     5041 caaatatgta aatgcaaatc gagtccatct gtagctttta atttcatttg tttgtacatc
     5101 tgtctccctc ccatttcatc ttattattag tataccacct g
//
LOCUS       DASDYK010000148         5124 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.148, whole genome shotgun sequence.
ACCESSION   DASDYK010000148 DASDYK010000000
VERSION     DASDYK010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5124)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5124)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5124
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.148"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(60..791)
                     /locus_tag="U0308_002669"
     CDS             complement(60..791)
                     /locus_tag="U0308_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2317623.1"
                     /translation="MSYEYFPGFYDRLMDSELYDEWLEFTAHFIGDTPKKILDLACGT
                     AEFALRLSFSGHQVTGVDLSKEMVAVAKEKVAAAEINLPIIEQDMSKLALKQTFDVVT
                     CFCDSLNYLETEQALEATIQAVSVHLEPNGLFLFDVHSVFKVDQGFKDYSYGDSDEEI
                     STIWNSFPGEHPHSVEHELTFYILDEDDTYNRVDELHKERTYPIATYENILKKYGFTK
                     IDIYADFSHEKPNNTSERIFFAARK"
     gene            complement(847..1203)
                     /gene="rsfS"
                     /locus_tag="U0308_002670"
     CDS             complement(847..1203)
                     /gene="rsfS"
                     /locus_tag="U0308_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEM2317624.1"
                     /translation="MNSYDTLMLTAKAADDKRAEDILALDMKGLSSFADYFVICHGNS
                     DKQVQAIAREIKEKALENQVDVKRLEGFDAAKWILIDLGDVIIHVFHKEERSYYNLEK
                     LWGDAPLVDVSAAFIS"
     gene            complement(1208..1783)
                     /gene="yqeK"
                     /locus_tag="U0308_002671"
     CDS             complement(1208..1783)
                     /gene="yqeK"
                     /locus_tag="U0308_002671"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     YqeK"
                     /protein_id="HEM2317625.1"
                     /translation="MERNEMLKKVEAAMPNARFKHTLGVEKAAVELAEHYHMDVEKAR
                     ITALLHDYAKYYDDDKARKIIEDEGYDPRLLSFHRSLWHAPVGAYLAEKEFGITDTEI
                     LEAIRLHTTGSATMSDFDKLIYLADYTEQGRTFPGVYKARRLALKSLNEAMLFALSNT
                     ITHLVKKQQLVFPDTLDAYNYFVNLNLEGDY"
     gene            complement(1770..2336)
                     /locus_tag="U0308_002672"
     CDS             complement(1770..2336)
                     /locus_tag="U0308_002672"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HEM2317626.1"
                     /translation="MKHKVGILGGTFDPPHLAHLRMAEEAKKQLGLEKILFLPNKIPP
                     HKHISGMASNDERVEMLQLMIEGIDSFEIDTRELMRAGKSYTYDTMRDMISEQPDTDF
                     YFIIGGDMVEYLPKWYHIDDLVKMVTFVGVNRPSYQTEVPYDIVKINMPETTISSTEI
                     RNNIENASTFLPEKVWSYIKEHQLYGKK"
     gene            complement(2354..2644)
                     /gene="yhbY"
                     /locus_tag="U0308_002673"
     CDS             complement(2354..2644)
                     /gene="yhbY"
                     /locus_tag="U0308_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HEM2317627.1"
                     /translation="MLTATQKRFLRKEAHNIQPIFQVGKGSVSPNLIIHVKEALEARE
                     LIKISILQNCEEDKQTVAEKISARSGAEIVQVIGRTIILYKTSVNKQQIKLP"
     gene            complement(2644..3465)
                     /gene="aroE"
                     /locus_tag="U0308_002674"
     CDS             complement(2644..3465)
                     /gene="aroE"
                     /locus_tag="U0308_002674"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEM2317628.1"
                     /translation="MEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFE
                     TEIKKLMDSGVRGFNITTPFKERILPFLDELEDLAAASGAVNTVLKKEDKWYGFNTDG
                     KGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVTNRTTEKAIEMTK
                     DNENHHAVTLEEAEKQLADFTVIIQTTSIGLEASKNKSPISLANVKKGTICSDIIYNP
                     AETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN"
     gene            complement(3485..4585)
                     /gene="yqeH"
                     /locus_tag="U0308_002675"
     CDS             complement(3485..4585)
                     /gene="yqeH"
                     /locus_tag="U0308_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YqeH"
                     /protein_id="HEM2317629.1"
                     /translation="MTEEIRCIGCGAVIQTEDPDKIGYAPKSSLNNEQVICKRCFRLK
                     HYNEIQDVALTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLV
                     GNKEDVLPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIEELRNG
                     QDVYVVGCTNVGKSTLINRIIKQASGENNVITTSQFPGTTLDKIEIPLADGNVLVDTP
                     GIINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSLV
                     VYVSNNLPIHRTKLEKADALYEKQAGIVLQPPTEEGMETLPKLVPYSFTIKEKADIVF
                     SGLGWVTIPEGGAKVTAWVPEGVSATIRTSLV"
     gene            complement(4582..5103)
                     /locus_tag="U0308_002676"
     CDS             complement(4582..5103)
                     /locus_tag="U0308_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqeG family HAD IIIA-type phosphatase"
                     /protein_id="HEM2317630.1"
                     /translation="MLKQFSPDKMLNTPFGITAAQLRKMGKTTILTDLDNTLLAWDQL
                     DATDEVINWFTILKEEGIKVMIFSNNNEERVARVAKAIDVPYLARAKKPLGANFRWAL
                     KEMDATPEETVMIGDQIMTDIFGGNRQKLTTIFVRPVKQTDGMATKLNRMMESVILKR
                     LAKKNQIKWEESL"
BASE COUNT         1424 a         1047 c          875 g         1778 t
ORIGIN      
        1 attccttttt gatagtttaa ggtgaaaatc gcacaaaaaa agaaagtaat aatgaaaaat
       61 tactttcttg ctgcgaaaaa gattctttcg ctcgtattat tgggtttttc atgactaaaa
      121 tcggcataaa tatcaatttt cgtaaaacca tattttttta atatattttc ataagtagcg
      181 attggatagg tgcgttcttt atgcagttcg tccacgcgat tatacgtgtc atcttcatct
      241 aaaatataga aggtaagttc atgttcgaca gaatgcggat gttcgccagg aaatgaattc
      301 caaatcgtcg aaatctcttc atcgctatct ccgtatgaat aatctttaaa cccttgatct
      361 actttaaaga cggaatgtac gtcaaataaa aataagccat ttggttctaa atgcactgat
      421 acagcttgaa tagtagcctc aagagcttgt tctgtttcca aataattaag tgaatcacag
      481 aagcatgtaa ctacatcaaa cgtttgcttt aatgctaact tggacatatc ttgttctata
      541 atcggcaaat tgatttcagc cgctgccact ttttctttag caactgccac catttctttt
      601 gataaatcca caccagtaac ttgatgacca gaaaaactta aacgtagcgc aaattcagct
      661 gttccacaag ccaaatcaag tattttttta ggagtatctc caatgaaatg agccgtgaat
      721 tctagccatt catcataaag ttcggaatcc attaatctat catagaaacc cggaaaatat
      781 tcgtaactca tagtaatttc tccttaaaaa aacagacgag aattccctcg cctgttctgt
      841 tttttattaa gaaataaacg cagcagaaac gtccacgagt ggcgcatctc cccaaagttt
      901 ttctaagtta tagtaagaac gttcttcttt atggaacaca tggataataa catcacctaa
      961 gtcgattaaa atccactttg ccgcatcaaa accttctaaa cgcttcacat ctacttggtt
     1021 ttctaacgct ttttctttaa tttcacgagc gattgcttgc acttgtttgt ctgaattacc
     1081 gtgacagata acaaagtaat ccgcaaagct tgataacccc ttcatgtcta gtgctaaaat
     1141 atcctctgct cttttatcgt ctgctgcctt agcagtcagc attaatgtat cataactgtt
     1201 caaattatta atagtctcct tccaaattta aattaacgaa ataattgtag gcatccagtg
     1261 tatctggaaa aaccaattgt tgctttttga ctaagtgcgt aatcgtattc gataaagcga
     1321 ataacattgc ttcgttaagc gatttaagtg ctaatctgcg tgctttatat acgccgggaa
     1381 atgttcttcc ttgttctgta tagtcagcta agtagataag tttatcgaaa tcagacatcg
     1441 tcgcgcttcc tgtcgtatgc agacgaatcg cttctagtat ttctgtatca gtaataccaa
     1501 attctttttc tgccagatag gcgccaacag gagcgtgcca cagcgaacga tgaaaagaaa
     1561 gtaaacgcgg atcataaccc tcgtcctcga taatttttct cgctttatca tcgtcatagt
     1621 acttagcata atcatgtagc aaagcggtta ttcgtgcttt ttctacatcc atatgataat
     1681 gttctgcaag ttctacagct gctttttcta cgcctaaagt gtgtttaaat cgagcattag
     1741 gcatagctgc ttctactttt tttagcattt catttctttc cataaagttg atgctccttt
     1801 atatatgacc atactttttc tggtaaaaag gtgctcgcgt tctcaatatt atttctaatt
     1861 tccgtagaag aaatcgtcgt ttctggcata ttgattttaa cgatatcata cggaacctcc
     1921 gtctgataac tggggcgatt aaccccaacg aatgtcacca tttttactaa gtcatctata
     1981 tgataccact ttggcaaata ttctaccatg tccccgccga taatgaaata aaaatctgta
     2041 tccggctgtt cgcttatcat atcacgcatt gtgtcatacg tataggactt tcccgcgcgc
     2101 atgagttcac gtgtatcaat ttcaaaggaa tctatacctt ctatcattaa ttgaagcatt
     2161 tctacacgct catcatttga agccatacca ctgatatgtt tatgaggcgg aattttatta
     2221 ggtaaaaaaa gaattttctc aagtcctagt tgcttcttag cctcttctgc catgcggagg
     2281 tgcgctaaat gcggcggatc aaaagtccca cctaagatgc cgactttatg tttcatcgta
     2341 ggttcctccc gatttatggc aacttaattt gttgcttgtt tacagaagtt ttgtacagaa
     2401 taatcgttct gccaatgact tgaacgattt ccgcgcctga acgagcacta attttttctg
     2461 caacggtttg tttatcttct tcgcaatttt gtagaatcga gattttaatt aattctctcg
     2521 cttctagtgc ttcttttacg tggataatta agtttggtga tacgcttcct tttcctactt
     2581 ggaaaatggg ttggatatta tgcgcttctt ttcttaaaaa acgtttttgt gtagctgtta
     2641 acattagttt cctcctaatt gttcgagtac tgcttctttc atcagtgatc gctctggttt
     2701 tatcccagtc catatttcaa aggcaagtgc cccttgatta acaaacatcg gtaagccatt
     2761 ttgggtaata gctccatttt tctttgcttc tttcaaaaag gctgtttcgg ctggattata
     2821 aataatatca gaacaaatcg ttcctttttt tacattagcc agcgaaattg ggcttttgtt
     2881 tttggaagct tctaaaccga tagatgttgt ttgaatgata accgtaaaat cagccagttg
     2941 tttttctgct tcttctagtg tgacggcgtg atgattttca ttatctttcg tcatttctat
     3001 cgctttttcc gttgtacgat tagtaacggt tattttagca tccgtgtgag tggaaagcgc
     3061 taggtaaatt gccttgcttg cgccacccgc accggtaatt aaaatagaat catcttctgt
     3121 aattgagcgg atttcttcta atccttctaa gtagcctttg ccatctgtat taaatccgta
     3181 ccatttgtcc tcttttttta gcacagtatt cactgcgcca gaagctgctg caagatcctc
     3241 taattcatct aaaaatggta aaatacgctc tttaaatggt gttgtaatat taaatccacg
     3301 cactccagaa tccattaatt ttttgatttc tgtttcaaaa gcgtcttctt ctattaaaac
     3361 agagttatac tccgcattca ttccaagttc ttggaaaatc cgattttgca tagctggtga
     3421 taacgagtga cgaataggat ttccgataac aacatatttt tccaaatgat aggcctcctt
     3481 cgttttaaac gagtgatgtc cggatagttg cgctcacgcc ttcaggaacc cacgcagtaa
     3541 ctttcgcgcc gccttctgga attgtcaccc agccgagtcc ggaaaagaca atatccgctt
     3601 tttcttttat tgtaaaagaa tacggaacta gcttaggaag tgtctccatc ccttcttctg
     3661 taggcggttg aagcactatt cctgcttgtt tttcgtataa cgcatccgct ttttctaatt
     3721 ttgtccggtg aattggtaaa ttattagata catagactac taatgatttg cgaccacctg
     3781 aaacataatc taagcgagca agcgccccta aaaatagggt ttgttcttcg tttaattgga
     3841 agacagctgg ttttacttct tttttaggtg taatagcttt taacgttgtt gtatcaatga
     3901 aatgtgccat ttggtgatgg ttaataattc ctggtgtgtc aacaagtaca ttgccatctg
     3961 ctaatgggat ttcgatttta tcaagcgttg ttcctgggaa ttgagaggtt gtaatgacat
     4021 tgttttcccc ggatgcttgt ttaataatac gattgattag cgttgattta ccaacgtttg
     4081 tacaaccgac aacatagaca tcttgtccat ttcgcaattc ttcaattttc tctaaaagag
     4141 tatcaaaacc gtggcctttc tcagcgctaa ctaatacgac atctgtcgcc gccaagcctt
     4201 gctctttggc acgagttctc atccaacgtg tcaacttatc acgttttaat gattttggta
     4261 atacatcttc tttgttcccg acaagtaata ccggattact tcctgcaaaa cgaggaagtc
     4321 caggtaacca actaccatcg aaatcaaaaa tatctactac ataaacaatt aaagcttgtt
     4381 tcgaactaat ttgatttaaa atacgtaaaa aatcatcgtc tgttagggca acatcttgaa
     4441 tttcattgta atgttttaga cgaaaacatc ttttacaaat aacttgctca ttgttcaggg
     4501 atgattttgg agcatagccg attttatcag ggtcttctgt ttgaataacc gcgccacaac
     4561 caatacatct aatttcttct gtcaaagtga ttcctcccac ttaatttggt ttttctttgc
     4621 taatcgtttt aaaataacgc tttccatcat tcgatttaat tttgtcgcca taccatctgt
     4681 ttgttttaca gggcgaacaa aaatagttgt taatttttga cggtttccac cgaatatatc
     4741 tgtcataatt tgatcgccaa tcatcacagt ttcttctggt gttgcatcca tttcttttaa
     4801 tgcccagcgg aaattagcgc ctaagggttt ttttgcccgg gctaaataag gaacatcgat
     4861 tgcttttgcc acacgagcaa ctcgttcttc gttattgtta gaaaaaatca ttactttgat
     4921 tccttcttct ttcaatatag taaaccagtt gataacttca tccgttgcgt ctagttgatc
     4981 ccatgcaagc agcgtattat caagatcagt caaaatagta gtctttccca ttttgcgaag
     5041 ttgtgctgct gtaattccaa atggagtatt caacatttta tctggtgaga attgctttaa
     5101 cacgtattgg cacctcattc tttt
//
LOCUS       DASDYK010000149         5052 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.149, whole genome shotgun sequence.
ACCESSION   DASDYK010000149 DASDYK010000000
VERSION     DASDYK010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5052)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5052)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5052
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.149"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..365
                     /locus_tag="U0308_002677"
     CDS             <1..365
                     /locus_tag="U0308_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317631.1"
                     /translation="TSKQKEFIDQLLLEKEWELTNDLQSYNDGEVTQEVAANIIEYLI
                     SCEDTANAAAIRVEMMNRMTDRQRNFINELISEKIWETTSEIQIFLSSNNTEVDKYTA
                     SIIIEYLLSCKNKYNLAI"
     gene            379..582
                     /locus_tag="U0308_002678"
     CDS             379..582
                     /locus_tag="U0308_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317632.1"
                     /translation="MMNLKTIFEKWGYGHLKEEIEDLEDGYEVVINVVDRDTFNLMND
                     LNESTKFTVYEDCINDTITIAHS"
     gene            612..833
                     /locus_tag="U0308_002679"
     CDS             612..833
                     /locus_tag="U0308_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2317633.1"
                     /translation="MAGFIKKYLESKDWTIYQLGNATGLAHQTIRSADSKTVDQISAK
                     NVRLIAEVFKCTPGELLDEFYKIEEEIMR"
     gene            complement(895..1728)
                     /locus_tag="U0308_002680"
     CDS             complement(895..1728)
                     /locus_tag="U0308_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEM2317634.1"
                     /translation="MAKVAIFGGHNGTSESGASGNGLTEKAVAKEAAQIATAYAKACG
                     HSVVNGFGKPLSERIKYANSENVVAVLELHTNAGGGQGAETLYCEGVASAKEDAITVA
                     KAGSIKGLKNRGAKGDTTTRHGRLGIVRDTKAPALLHELFFIDSASDVAIWKNNKKAI
                     IESITKEWLKRRGLNSVPKTTTSKPAPAKPTTPSKPATSNNTYKNKKLVSKAANLRFY
                     SKPSWADKDVAGTVNKGIGFPTIVEKIKVGTAYQYKVKNSKGATFYITASDKYVELKN
                     K"
     gene            complement(1731..1985)
                     /locus_tag="U0308_002681"
     CDS             complement(1731..1985)
                     /locus_tag="U0308_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HEM2317635.1"
                     /translation="MKINWIVRFKNPVWVIALVGGLFLIAQSVLYVFGIEWDYNELLN
                     RLITVITSIFALIGIIQDPTTAKIKDSERAQKYNEPGKDE"
     gene            complement(1996..2211)
                     /locus_tag="U0308_002682"
     CDS             complement(1996..2211)
                     /locus_tag="U0308_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM2317636.1"
                     /translation="MSEQKAKKIKSTSVLHEETTNNEVQTAKTYVVKQDEKLSVIATK
                     LGLSVGELAEKNKLDSYKLKVGQELVL"
     gene            complement(2231..2677)
                     /locus_tag="U0308_002683"
     CDS             complement(2231..2677)
                     /locus_tag="U0308_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317637.1"
                     /translation="MENEKEKIDYVSRAELFEHGIDIKKEMSRKVDKVESKVDKISEE
                     VVELKVLVIPMVTSSKETAQNTQKMADTLERYTRSTTKQLHEHDLEIADVKHSIDNTL
                     KSISDEESEEKHKKFSNVQIITSVLALIGIILGGILSWDWGQFIFK"
     gene            complement(2653..3099)
                     /locus_tag="U0308_002684"
     CDS             complement(2653..3099)
                     /locus_tag="U0308_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317638.1"
                     /translation="MKTRWKKYINQMLDTNYKEVFALFFLLSVSSYNILTGFFLMTSG
                     DKIVEKSRTYQLMDNLMTIDTWGLLFILSAALILIASFQESNARFINLIFGGTIGAIV
                     LFLYSAASSESAVTNLLPSRYALSACFNLFVAVMGGLELWKTKRKK"
     gene            complement(3287..3628)
                     /locus_tag="U0308_002685"
     CDS             complement(3287..3628)
                     /locus_tag="U0308_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317639.1"
                     /translation="MEIYITTNNEGFLTGYSTSECTPGKKIDIDENDAFFQRGFASYK
                     YIANQLIFDENKEKEFQYEKTLQDAIPSAADQLLTTQEALVELYEQNTKLGQQLIDTQ
                     LAMVDMYEANL"
     gene            complement(3634..4362)
                     /locus_tag="U0308_002686"
     CDS             complement(3634..4362)
                     /locus_tag="U0308_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317640.1"
                     /translation="MSRFNANLARWEATGTKPPDSTIQNGWLAGTKPPADWFNWYFNS
                     TYTALKELQELAALNADLINHTGNTNNPHSVTKAQLGLSDVENFGIASLDEAKAGIAS
                     NKLMTPASVLAAIKEQFNTQNVLFEGEAWPSGSTYKFVNGQKVSDQNLGLIFIWSDYD
                     VLPGSASVANNYNFDFSFIPKIFVNKHAGANVNVPVATNFNASVTSITIKTLYITDTT
                     FAGHDLNSSGLNANDAILRYIIGV"
     gene            complement(4383..5024)
                     /locus_tag="U0308_002687"
     CDS             complement(4383..5024)
                     /locus_tag="U0308_002687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317641.1"
                     /translation="MSVKDFLGKLTDAFTKSEKSNIGKLFIIVDQQISALTTALEKTE
                     AWRDIDNAQGKVLNNLGENVGQNRGRATDEVYRVLIRGKVARNASDGTTNKIIHAIAK
                     SLDCNYKDIQIINANDSNSSDEHEPAAIIIKKIPLSALNAVGLSTNQFLQLVNSLKSG
                     GVRVAYINLEGSFSFAKGATEEISDDGFSELDQILGGTLGGLFTPSDDFKLPI"
BASE COUNT         1496 a          999 c          818 g         1739 t
ORIGIN      
        1 tgactagcaa gcaaaaagaa tttatagacc aattactatt agaaaaagaa tgggaactaa
       61 ccaatgattt acaatcatat aatgatggtg aagtaactca ggaagttgca gcaaatatca
      121 ttgaatactt aatatcttgt gaggatacgg cgaacgcagc agcgattaga gtggaaatga
      181 tgaatagaat gactgataga cagaggaatt tcattaacga attaatatca gaaaaaatct
      241 gggaaacaac ttccgaaata caaattttcc ttagttcgaa taatacagaa gttgataaat
      301 atacagcatc aataattatt gagtacttac tatcttgcaa aaataaatat aacttggcaa
      361 tttaaaagga ggaagttaat gatgaattta aaaactattt tcgaaaaatg gggctacggg
      421 catctgaagg aagagattga agatttagag gatggttatg aagtagtaat aaatgtagta
      481 gatagagata cttttaatct tatgaatgat ttaaacgaat caactaaatt tacagtttat
      541 gaagattgca taaacgatac tattacaata gctcatagct aaaaattaaa tatagagagg
      601 aatagtgaaa aatggcaggg tttataaaaa aatacttaga aagtaaagat tggacaattt
      661 atcagctagg taatgcaacg ggacttgcac atcaaacaat aagaagtgct gactcaaaaa
      721 ctgtagacca aatatctgcg aaaaatgtgc gtttaatagc agaggtcttt aaatgcactc
      781 ctggcgaatt gttagatgaa ttctacaaaa tcgaagaaga aataatgcgc taagcttttg
      841 tttagcgtat tttttgcata aaaaaagccc ccgcacaaag cgagggtttg tttattattt
      901 gtttttaagc tctacatatt tatcacttgc agtgatgtaa aaagtagcgc cttttgaatt
      961 tttaactttg tattgataag ccgtgccgac tttaattttt tcgacaatcg tcgggaagcc
     1021 aatgccttta ttaacagtgc ctgctacatc tttatctgcc caagaaggct tactataaaa
     1081 tctcaaatta gcagctttag aaactagttt tttattctta taagtgttat ttgaagttgc
     1141 tggtttagaa ggtgttgttg gtttagcagg agcgggttta gacgttgttg tcttcggaac
     1201 agaattcaag cctcgtcttt ttaaccattc ttttgtgatc gactctataa ttgctttttt
     1261 attgtttttc caaatagcta catcactcgc ggaatcaatg aaaaatagct catgtagtaa
     1321 cgctggtgct tttgtatctc gcacaatgcc taaacgcccg tgacgagttg tagtatcgcc
     1381 ttttgcacct cgatttttta gcccttttat cgatccagct ttggccacag taatcgcgtc
     1441 ctcttttgca gatgcaacac cttcgcaata aagtgtttct gcaccttgtc cgccgccggc
     1501 atttgtgtgt aattccaata ctgcgacaac attttcactg tttgcgtatt taatccgctc
     1561 tgataaaggt ttaccaaatc cgttaactac agaatgcccg catgctttcg cgtaagctgt
     1621 cgcaatttgc gcggcttctt ttgctactgc tttttcagta agtccattcc cgctcgctcc
     1681 tgattcgctt gttccgttgt gtcctccaaa aattgccact tttgccattt ctattcatcc
     1741 tttccaggtt cattatattt ttgtgctctt tcactatctt ttatttttgc tgttgtcggg
     1801 tcttgaataa ttccgattag agcaaatata gaagtaatta cagtgatcag tctattcaat
     1861 aattcgttgt aatcccattc aatgccaaat acgtagagta cggattgggc aattaaaaaa
     1921 agaccgccaa ctagagcgat cacccacacg ggattcttaa aacgaacaat ccaatttatt
     1981 ttcatgatat tcctcctaca atactaattc ttggccaact tttaatttat aagaatctag
     2041 tttatttttt tctgctaatt caccaactga taaccctaat tttgtagcaa taactgaaag
     2101 tttttcatct tgtttcacta cataagtttt tgcagtttga acttcgttat ttgtagtttc
     2161 ttcatgtaac actgatgtag atttaatttt ttttgctttt tgctctgaca tttccactca
     2221 cctcccttaa tcatttgaaa ataaattgtc cccaatccca acttagaatt ccaccaagga
     2281 taatgccaat taatgctaag acggaagtaa ttatttgaac gttactaaac ttcttatgtt
     2341 tctcttctga ctcttcatcg cttatgcttt ttaatgtatt atcgattgag tgtttcacat
     2401 ccgcaatctc caaatcatgt tcgtgcaact gctttgttgt tgatcgcgtg tatcgttcga
     2461 gtgtgtccgc catcttctgc gtgttttgag ctgtctcttt tgatgacgtg accatcggaa
     2521 tcaccagaac tttcagttct actacttcct cactgatttt atctactttg ctctcaactt
     2581 tatcgacttt tcttgacatc tcttttttta tatcaattcc atgctcaaac aactctgctc
     2641 tggacacata atctattttt tccttttcgt tttccataat tccaagcccc ccattaccgc
     2701 aacaaataga ttaaaacatg cgcttagagc atagcggctg ggcaataaat ttgtaacagc
     2761 actctctgag ctcgctgctg aatataagaa caacactatc gcacctattg tcccgccaaa
     2821 aatcaaattt ataaatctcg catttgattc ttgaaaagat gcaattaata tcaaagcagc
     2881 acttaaaata aacaacaagc cccacgtgtc aattgtcatc agattgtcca ttagctggta
     2941 tgtcctgctt ttttcaacaa ttttatcacc agatgtcatt aaaaaaaatc cagtcaaaat
     3001 gttataagat gaaactgata ataagaaaaa taacgcaaaa acttctttgt aattagtatc
     3061 aagcatttga tttatatact ttttccatct cgttttcatt accccatcga cccccttcac
     3121 tctgacaaat tactctgcta attcagcgca atctgcgtca attaacaatg cttttacttg
     3181 tgcttgcagt aagcgtggta cttctttgaa tgttttctta ccgttgagaa tcaaattcaa
     3241 ataaatcaca gccattttct attcacctcc ttaaataaca aataacctat aaattcgctt
     3301 cgtacatgtc taccatcgcg agttgtgtgt caatcaactg ctgtcctaat tttgtgtttt
     3361 gctcatataa ttcaactaat gcttcctgcg tagttagtaa ttgatctgct gcgcttggta
     3421 ttgcatcttg caacgtcttt tcatactgaa actctttttc tttattttcg tcaaatataa
     3481 gttgattcgc aatatactta taactagcaa aacctcgttg gaaaaaggca tcgttttcgt
     3541 ctatatcaat ttttttgccc ggcgtacatt cgcttgtcga atagccagtt aaaaaacctt
     3601 cgttatttgt agtaatgtat atttccatct cgttcacact cctatgatgt agcgtaaaat
     3661 agcatcattt gcatttaagc cacttgagtt taaatcatgt cctgcaaaag ttgtatcagt
     3721 aatgtaaaga gtctttattg ttatgcttgt cacggaagcg ttgaagttcg ttgcaactgg
     3781 cacatttacg ttcgctcctg catgcttatt aacaaaaatt ttaggaatga atgaaaagtc
     3841 aaagttataa ttattagcga cactcgctga cccagggaga acatcataat cactccagat
     3901 gaaaattaaa cctaaatttt gatcagaaac tttttgaccg tttacaaact tgtaggtact
     3961 tcctgaaggc catgcttccc cttcaaataa cacattttgc gtattgaact gctctttaat
     4021 tgctgctaaa acacttgcgg gagtcattag tttgttacta gcaatacctg ctttagcttc
     4081 gtccagagat gcaattccaa aattttccac atcacttaaa ccaagttgag cttttgttac
     4141 actgtgtgga ttatttgtat ttcctgtatg atttattaaa tctgcattta atgcagcaag
     4201 ttcttgtagc tccttcagtg ctgtatatgt gctattaaaa taccagttaa accaatcggc
     4261 tggcggctta gtccccgcca accatccatt ttgaatggta ctatccgggg gctttgttcc
     4321 cgttgcttcc caacgagcta aatttgcatt aaatcgtgac ataattatcg cctctctttc
     4381 ttttaaattg gtaacttaaa gtcatctgat ggtgtaaata aaccgcctaa agttcctccc
     4441 agaatttgat caagttccga aaaaccgtcg tcgcttatct cttccgttgc tccttttgca
     4501 aaagaaaaag aaccttctaa attgatgtat gctactctaa caccaccaga tttcagactg
     4561 tttactagct gtaaaaattg attagtactt aagccgactg cattcagagc agaaagagga
     4621 atctttttaa taattatcgc agcaggctca tgttcatctg atgaattaga atcgttagca
     4681 ttgattattt gaatatcttt ataattgcaa tctaatgatt ttgcgattgc atggatgatt
     4741 ttatttgtgg ttccgtcact tgcgtttctt gcaacttttc cacggattaa aacacgatat
     4801 acctcatcag tagctcgtcc tctgttctgg ccaacatttt ctccaaggtt attcagtacc
     4861 ttcccttgcg cattatcaat atctcgccat gcctctgttt tttcaagagc cgtagttaat
     4921 gcggaaattt gctgatctac aataataaat aattttccta tgttactctt ttctgacttt
     4981 gtaaaagcat ctgttaattt ccctagaaaa tctttaacgg acatttattg tcacctcaat
     5041 atcttcccaa cg
//
LOCUS       DASDYK010000150         5025 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.150, whole genome shotgun sequence.
ACCESSION   DASDYK010000150 DASDYK010000000
VERSION     DASDYK010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5025)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5025)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5025
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.150"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(51..1097)
                     /gene="recA"
                     /locus_tag="U0308_002688"
     CDS             complement(51..1097)
                     /gene="recA"
                     /locus_tag="U0308_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEM2317642.1"
                     /translation="MNDRQAALDQALKQIEKQFGKGSIMKLGEHSDQNISTISSGSLA
                     LDIALGVGGYPRGRIIEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYA
                     KNLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDA
                     HVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEITPGGRALKFYST
                     VRLEVRRAEQLKQGTDVMGNKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMA
                     AEVDVINKSGSWYSYKEERIGQGRENAKQYLKEHTDIRDEISKRVREEYEIDGSNKEP
                     LDEGEETLSLLDDE"
     gene            complement(1370..2614)
                     /locus_tag="U0308_002689"
     CDS             complement(1370..2614)
                     /locus_tag="U0308_002689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEM2317643.1"
                     /translation="MASAEIIAVGTELLLGQIVNSNAAFISQELAADGIYVYHHTVVG
                     DNPTRLKEVIEIAENRSDILIFTGGLGPTEDDITKQILAAHLQKQLVEDEYHMNKINE
                     YFTSRNRTMTENNKLQAVIIEDSIVLNNDFGFAAGMYLRENNHTYVLLPGPPSEMKPM
                     FTSYANPLLLSESGDQNILESKIMRFFGIGESQLAADLNDLIVTQVNPTIATYAGDNE
                     VVVRITATAKTKEEASRLVKETEEEILRREGTFLYGYGEVSLSELVTAMLLEKELTIS
                     AAESFTAGLFQAEIARFPGISKIFKGGMVTYSEETKQSILQVSPQVIKEKGVVSAECA
                     KEMAENVSRLCKTDIGISFTGVAGPDSLEGHPAGTIWIGLSVKGYETEAFQFVYGRDR
                     NHNRRRAVKQGFQLIKQFLDAN"
     gene            complement(2682..3260)
                     /gene="pgsA"
                     /locus_tag="U0308_002690"
     CDS             complement(2682..3260)
                     /gene="pgsA"
                     /locus_tag="U0308_002690"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEM2317644.1"
                     /translation="MNLPNKLTVIRIFMIPIFVILCVVPFDWGSVTWLDSTIPVTSLV
                     ATIIFIVAALTDWFDGHLARKYNLITNFGKFADPMADKLLVAAAFIILVEMHIAPSWV
                     VILIISRELAVTGLRLLLVEGGEVLAAGQLGKIKTFTQMIAIPLMLLNNFPFAWTGIR
                     VDLVFLYVCAFFAVWSGIDYFYKNRGVFKGSM"
     gene            complement(3351..4280)
                     /locus_tag="U0308_002691"
     CDS             complement(3351..4280)
                     /locus_tag="U0308_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2317645.1"
                     /translation="MTELGDKLKQARREKGLSLDDLQQVTKIQKRYLVAIEEGNYAVM
                     PGKFYARAFIKQYAEAVGLDSATLFDEFESEVPETPQQEVVNNEPTRVQSKRNPMPAQ
                     SVGNQANTRNRFFDILPKILIALFIVFILFIVWFFLLNKQDNSTEKVKTDTNNPTVKV
                     EDSTKSKDTSKDTEKKDTTTNKDKSTETKDKKEDTTKEVEVTKGGTSGNATTYTVKNT
                     DKMTLSLSATGDSWIGVSDANGSTIQNETLSTQNPSAEIDLGDNKTVSIVIGNSPVTT
                     VKINGKQLELAPDLVKQVLTINLEASDTSSDAE"
     gene            complement(4331..>5025)
                     /locus_tag="U0308_002692"
     CDS             complement(4331..>5025)
                     /locus_tag="U0308_002692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2317646.1"
                     /translation="SGEIGQAICLSLAKAGWNLYLHYYQNKQAVEKLLPQLLAEDVDV
                     ILIQADFDDLTSLTEMEKQVFQLDAFIHAAGHAHYGLFQDTTDINITELWNVHMYMPM
                     RLIRTFMPKLMKSSQGRIIFISSIWGEVGASMEVAYSTVKGAQIAFCRALSQEVGLSG
                     ITVNAVTPGVVETKMMDQFSDEEKEILRQEIPLNRFAQPEEIAEIVAFLTSKKASYIT
                     GEVLRLNGGWLM"
BASE COUNT         1452 a         1048 c          794 g         1731 t
ORIGIN      
        1 gtaaaaaata cgtgacagga agtaaattcc tatcacgtat ttagtattat ttattcatca
       61 tctagtaaac ttaatgtttc ttcgccttca tctaaaggtt ctttattgct tccgtcgatt
      121 tcgtactctt cacgaacacg ttttgaaatc tcatcacgaa tatctgtatg ttcttttaga
      181 tattgttttg cgttttcacg accttggccg atacgttctt ctttgtaaga ataccatgaa
      241 ccactcttat tgattacatc cacttcagcg gccatatcaa caagctcgcc ttcacgtgaa
      301 ataccttcac cgtacatgat atccacttca gcaatacgga atggaggagc tactttgttt
      361 tttacaactt taatttttgt tttgttaccc attacatctg taccttgctt aagttgttct
      421 gcacgtctta cttctaaacg tacagtcgaa tagaatttaa gcgcacgacc accaggtgta
      481 atctctgggt taccaaacat aacaccaact ttttcacgaa tttggttaat gaaaatagca
      541 atggtttttg atttattaat aacaccggaa agtttacgca atgcttggga cattaaacgt
      601 gcttgtagcc caacgtgtgc atcacccatc tccccttcga tttcagcacg tggtacaagt
      661 gctgcaacgg agtcaattac tagcatatct acagcaccac ttctaactaa tgcttctgca
      721 atttctaatg cttgctctcc tgtatcaggt tgagatagta ataattcatc aatatttaca
      781 cctaggtttt tagcataagc tggatctagt gcgtgttctg catcgataaa tgcagctgtt
      841 ccgccttgtg cttgtacttc cgcaatagca tgaagtgcaa cagttgtttt accggaactc
      901 tctggcccgt atacttcaat aatacgtcca cgtggatatc cgccgactcc taaagcaata
      961 tctaatgcta atgagccact agaaatagta gatatatttt ggtctgaatg ttcccctaat
     1021 ttcataatgg aacctttacc gaattgtttt tcaatttgtt ttaaagcttg gtctaatgcc
     1081 gcttgacgat cattcacatt gttgcctcct tcaataaata tcctaatagc tgtttttcta
     1141 cttcttctct ctcaaaaaac agtcagaatg ttttcctaaa attactataa cgcattttag
     1201 agcgagaagc aagcaaaaag cgaacattta ttcgtatttt ttattttgtg taagcaccgg
     1261 ttgctttctt cctcattata acgggatttt cagctttcgt ctaacacttt tttattgctc
     1321 atttccgttt tttctgcaga tttttttcct tttcttctag aaaaaaagac taatttgcgt
     1381 ctaaaaattg tttaattaac tgaaatcctt gttttactgc acggcggcga ttatggtttc
     1441 gatctcttcc atagacaaac tgaaaagcct ctgtttcata acctttaacg cttagtccaa
     1501 tccaaatagt gccagcagga tgaccttcta aactatctgg acctgcaaca cctgtaaaac
     1561 tgattccaat atccgtctta caaaggcggc ttacattttc agccatttcc ttcgcacatt
     1621 ccgcactaac aacgcctttt tcttttatta cttggggaga tacttgtaat atagattgtt
     1681 ttgtttcttc actgtatgtc accataccac ctttgaaaat tttcgaaatg ccaggaaagc
     1741 gggcaatttc tgcttggaac aaaccagcag tgaaactttc tgcggcagag atggtaagtt
     1801 ctttttcaag taacatcgcc gtaactaatt cagacaatga cacctctcca tatccatata
     1861 aaaaggtacc ttctcggcgc aatatttctt cctcggtttc cttcacaagt ctgcttgctt
     1921 cttcttttgt tttagctgtc gctgtgatac ggaccacaac ttcattatca ccagcatatg
     1981 tcgcaatcgt cgggttgact tgcgtgacaa tcaaatcatt taaatcagca gctaattgtg
     2041 actctccaat tccaaaaaag cgcataattt tggattctaa aatgttttga tcgccacttt
     2101 cgcttaaaag taatgggtta gcatagcttg taaacattgg tttcatttca gatggtggac
     2161 ctggtagcaa aacgtaagta tgattgtttt ctcttaagta cattccagcc gcaaagccaa
     2221 aatcattatt taatacgatg gaatcttcaa taataaccgc ttgtaattta ttattttcgg
     2281 tcatagtcct attcctagaa gtgaaatact cattaatttt attcatatgg tattcatctt
     2341 ccactaattg cttttgtaga tgagcagcca agatttgttt tgtaatatca tcctcagtcg
     2401 gtccaagtcc gccggtaaag attaaaatgt cacttcggtt ttcagcgatt tcgattactt
     2461 cttttaaacg tgttgggtta tctccaacta ccgtatgatg atatacatat attccgtcag
     2521 cagctaattc ttgtgaaata aacgcagcat tagaattaac aatttgccct agtaatagtt
     2581 ctgttcctac tgcaatgatt tctgcacttg ccatcttgcc ccatctccaa ttcgattttt
     2641 tgtatagaaa aaagcacaca atggtatgct tttttcattt attacataga ccctttgaaa
     2701 acaccacgat ttttgtagaa ataatcgata cctgaccata ctgcaaagaa tgcacataca
     2761 tacaagaaca ctaaatccac acgaatacct gtccaagcaa atggaaaatt atttaataac
     2821 ataagcggaa tagcaatcat ttgtgtgaat gttttaattt taccaagttg accagctgca
     2881 agtacttctc cgccttcaac taaaagtaag cgaagaccag taacagctag ttcacgacta
     2941 ataataagaa taactaccca agatggagcg atatgcattt ctacaagaat aataaatgca
     3001 gctgctacaa gtagtttatc agccatcgga tcagcaaatt taccgaagtt agtaatcaaa
     3061 ttatacttgc gagctaaatg tccatcaaac cagtctgtaa gagccgctac aatgaaaata
     3121 atagttgcta ctaaactagt taccggaata gtggaatcaa gccaagtaac gcttccccag
     3181 tcgaatggca ctacacaaag aatgacaaaa attggtatca taaaaattcg gataaccgtc
     3241 aatttattag gtaaattcat ctttttctct ccttttttac atttgaaaag tatgtaatta
     3301 taaaaaatgt tggcgaaatc taatgagtag atttcgccat ataaaacaaa ttattcagca
     3361 tctgagctag tatcacttgc ttctaaatta attgttaata cttgtttaac aagatcaggt
     3421 gcaagttcta gctgtttacc attgattttt acagttgtaa caggagaatt tccgataacg
     3481 atagaaaccg tcttgttatc acctaaatca atttctgcag aaggattttg ggttgatagt
     3541 gtttcgtttt ggattgtact accattcgca tcggaaacgc ctatccaaga atcaccagtg
     3601 gcgctaagtg acagagtcat tttgtccgta tttttcactg tgtacgtagt ggcattacca
     3661 gacgtccctc ctttagtcac ttcaacttct ttggttgtat cttctttttt atcctttgtt
     3721 tctgtagatt tatctttgtt tgttgtcgta tcttttttct cagtgtcttt acttgtatcc
     3781 ttgctttttg tcgaatcttc tacttttact gtaggattat ttgtatctgt tttcactttt
     3841 tccgtggaat tgtcttgttt attaagcaag aaaaaccaaa caatgaaaag aataaacaca
     3901 ataaataaag caataaggat ttttggtaag atatcaaaaa aacgattacg agtattcgct
     3961 tgattaccta cagattgtgc aggcatcgga tttcttttac tttgtacccg tgttggctca
     4021 ttatttacta cttcttgttg cggtgtttcc ggaacttcgc tttcaaactc gtcgaaaagt
     4081 gttgcgctat ctagcccaac tgcttctgcg tattgtttaa taaatgccct tgcataaaat
     4141 ttgccaggca ttacagcata atttccttct tcaatcgcta ccaaataacg tttttgaatt
     4201 ttcgttactt gttgcaagtc gtctaaactg agtccttttt cacgtctagc ttgtttcagt
     4261 ttatcaccga gttctgtcaa aattaaacac ctaccattac taatttcaaa tttccatttt
     4321 tttactaaaa ttacataagc caaccgccat ttaagcgcaa aacttctcca gtgatatagc
     4381 ttgctttttt acttgtcaaa aatgctacaa tttctgcaat ttcttctggt tgggcaaaac
     4441 gatttaaagg gatttcttga cgaagaattt ctttctcctc gtccgaaaac tgatccatca
     4501 tttttgtttc tacaacccct ggtgtaactg cattaactgt tattccagaa agtcccacct
     4561 cttgacttag cgcacggcaa aaggctattt gcgcaccttt tacagttgaa tacgctactt
     4621 ccattgatgc accaacttct ccccatatag aactaatgaa aataattctt ccttggctac
     4681 ttttcattaa tttgggcata aaagtgcgaa ttaatcgcat tggcatatac atatgcacat
     4741 tccataattc agtaatattt atatctgtag tatcctggaa taaaccataa tgggcgtgcc
     4801 ctgctgcatg aataaaggca tctaactgaa aaacttgctt ctccatctct gttaaacttg
     4861 ttaaatcatc aaaatcagct tgaatcagta taacatctac atcttctgct agtaattgtg
     4921 gcagtaattt ttccactgct tgtttatttt gataatagtg aagatacaag ttccaaccag
     4981 ctttcgcaag tgacaaacaa attgcttgac ctatttcccc gctag
//
LOCUS       DASDYK010000151         4956 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.151, whole genome shotgun sequence.
ACCESSION   DASDYK010000151 DASDYK010000000
VERSION     DASDYK010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4956
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.151"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(64..897)
                     /locus_tag="U0308_002693"
     CDS             complement(64..897)
                     /locus_tag="U0308_002693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="resuscitation-promoting factor"
                     /protein_id="HEM2317647.1"
                     /translation="MKKTVVAIAAGLIIAGSGSTQAFAAEYKVQDGDSLWKISNENNV
                     SIKQLKEDNNLSSDIIFPNQTLQVNSSEKKSTTNNNSEYTVVAGDTLGHIAVDKGVTV
                     NQLKSWNNLSSDLILVGQKLSIGNKASASESNASENNSTANNSANNKVTEQPKEEKAA
                     PTTQKSTSSNEASSNSSSAQGNVSKELTVTATAYSKAEPGMGHMTATGIDLNDNSRVI
                     AVDPSVIPLGSKVYVEGYGQAIAADTGGAIKGNKIDVHLNSVQEANNWGVKQVKVQIL
                     D"
     gene            complement(1288..1653)
                     /gene="ssb"
                     /locus_tag="U0308_002694"
     CDS             complement(1288..1653)
                     /gene="ssb"
                     /locus_tag="U0308_002694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEM2317648.1"
                     /translation="MINQVTLVGRLTKEPELKWTAEDRAVLNLTFALNRFGKNKRVDN
                     DADFIQCVIWGKRAEATAEFCAKGQLVGVVGELQSRNYLNKEEQKIYITEVLVHQIRY
                     LSSRNKDERVVNIPQEEDE"
     gene            complement(1904..2338)
                     /gene="fabZ"
                     /locus_tag="U0308_002695"
     CDS             complement(1904..2338)
                     /gene="fabZ"
                     /locus_tag="U0308_002695"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEM2317649.1"
                     /translation="MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEF
                     FNGHFPEYPVMPGVLIVEALAQTSGIAMMQSEANKGKIGLFAGIDGCRFKRQVVPGDQ
                     LLLEAEITRMRGAIAKAKVKATVEGDLVCEAEIMFALSDLPK"
     gene            complement(2361..3356)
                     /gene="mreB"
                     /locus_tag="U0308_002696"
     CDS             complement(2361..3356)
                     /gene="mreB"
                     /locus_tag="U0308_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreB"
                     /protein_id="HEM2317650.1"
                     /translation="MAKDVGIDLGTANVLIHVKGRGIVVNEPAVVAINNKTGQVLAVG
                     TEARDMVGRTPGDITAIKPMKDGVIADFDIVQEMLRFFIQKLNLKTFFSRPRILICCP
                     TNITSVEQKAIREVAEKSGGKQVFLEEEPKVAAIGAGMEIFEPSGNMIIDIGGGTADV
                     AVLSMGDIVTSQSVKVAGNKWDADILNYVKRKYNLLIGERTAENIKVTIGTACQGAKE
                     EKMEIRGRDLVSGLPKTISITSSEVEEAIHDSLHLMVLAAKQVLEQTPPELSADIIDR
                     GIIMTGGGSLLHGLDELMSEQLKVPVLITENPLDVVALGTGILLDSLTNKKRNRF"
     gene            complement(3519..4811)
                     /gene="murA"
                     /locus_tag="U0308_002697"
     CDS             complement(3519..4811)
                     /gene="murA"
                     /locus_tag="U0308_002697"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEM2317651.1"
                     /translation="MEKIIVRGGKQLNGSVKMEGAKNAVLPVIAATLLASKGTSVLKN
                     VPNLSDVFTINEVLKYLNADVSFVNDEVTVNATGEITSDAPFEYVRKMRASIVVMGPL
                     LARTGSARVALPGGCAIGSRPVDLHLKGFEAMGAIVKIENGYIEATAEKLVGAKVYLD
                     FPSVGATQNIMMAATLAEGTTVIENVAREPEIVDLANFLNQMGARVIGAGTEVIRIEG
                     VKELTATEHSIIPDRIEAGTFMIAAAITGGNVLIEDAVPEHISSLIAKLEEMGVQIIE
                     EENGIRVIGPDKLKAVDVKTMPHPGFPTDMQSQMMVIQMLSEGTSIMTETVFENRFMH
                     VEEMRRMNADMKIEGHSVIISGPAKLQGAEVAATDLRAAAALILAGLVADGYTQVTEL
                     KYLDRGYNNFHGKLQALGADVERVDDSKIDVTNLASLF"
BASE COUNT         1502 a         1022 c          713 g         1719 t
ORIGIN      
        1 ttaatctata aaaaagactg caaatagcat tacgccattc acagtctttc tatatggaat
       61 gaattaatct aaaatttgta ctttaacttg ttttacgccc cagttgttag cttcttgtac
      121 tgagtttaaa tgtacatcaa ttttattacc tttaattgca ccaccagtat cagctgcaat
      181 tgcttgtccg tatccttcaa cataaacttt tgaacctaaa ggaataacag atggatcaac
      241 tgcaattact cttgaattat catttaaatc aatccctgtc gctgtcatgt ggcccatgcc
      301 aggttcagct ttactatatg ctgtcgcagt taccgttaac tcttttgaaa cattaccttg
      361 tgctgaagaa ctgtttgaag atgcttcatt agaagaagtt gatttttgag ttgttggagc
      421 cgccttttct tctttcggtt gttctgttac tttattattg gctgaattat ttgctgttga
      481 attgttttct gaagcattac tttcacttgc tgaagcttta ttaccaatag ataatttttg
      541 acctactaat attaaatctg aagaaagatt attccacgat ttaagttgat taactgttac
      601 acctttatca acagcgatat gtccaagtgt atctcctgca acaactgtgt attcagaatt
      661 gttattagta gtggattttt tctcactact atttacttgc aatgtttggt tcggaaaaat
      721 aatgtcagaa ctcaaattgt tatcttcttt caattgtttt atagagacat tattttcatt
      781 tgatattttc catagtgaat caccatcttg cactttatac tcagctgcaa aagcttgagt
      841 tgaaccagat cctgcaataa ttaaaccagc cgcaatggct actactgtct tcttcatgta
      901 attattttcc ctccttgata actttcgagg ataatcgtac catacgaaac tatcagcttg
      961 gttactgaaa aattaagcat gtatgacaca ctttcaaata gtatccgttt tcctgcaata
     1021 tttgtaaatt gcctttattg tctgatttct attgctactg gttgtatttt ctgtgaaaat
     1081 caatctagcc taactcgccg tggggattta gtcaattaat aaaaggtttc ctgattgttc
     1141 acttaatgaa ttaaatgtgc gaagtaacta aaattggaaa atttttccat tacaaattga
     1201 gctgataatt tattgatttt gttgtttttt ggggtgggat ttttaaaatt cattatgaaa
     1261 tatggctctt tataacaaag tattacatca ttcatcctct tcttgaggta tattaactac
     1321 tctttcatct ttatttcgac ttgataaata ccgaatctga tgaactaaaa cttccgtaat
     1381 ataaattttc tgttcttctt tatttaaata attccgagat tgtagttcgc caactactcc
     1441 tactaattgt cctttagcac agaactctgc agtggcctct gctcttttac cccaaataac
     1501 acattgaata aagtcagcat cattatcaac tcttttattt ttaccaaacc gatttaaagc
     1561 aaaggttaaa ttcaaaacag ccctgtcttc cgcggtccat ttcaattctg gttccttagt
     1621 taatctgcct actaaagtta cttgattaat catataatcg cctctttctt ttgatgtaaa
     1681 gcgattgtat tagataaaaa gtttattgta aaatagctaa aactgtattt tcactaggta
     1741 gaaaccttcc aaaagattat ttcctctaaa agaaaaacat cattttatgt agttaatgac
     1801 atccaaagca tcattttagt actttgaaaa aatttttaac caatgttatt ctgagaacat
     1861 gaaaaaagca ctaaaaccca tttggacctc agtgctaatc tttttattta ggtaggtctg
     1921 ataaggcaaa cataatttca gcttcacaaa ccaaatcgcc ttctacagtt gctttgactt
     1981 ttgcttttgc aatcgcgccc ctcatccgag ttatttcagc ctcaagcaag agttggtccc
     2041 ccggaacaac ttgacgttta aatcggcaac catcaattcc agcaaataaa ccaattttac
     2101 ctttatttgc ttcactctgc atcattgcaa ttccactagt ttgcgctaga gcttccacta
     2161 ttaaaactcc tggcattaca ggatactcag gaaagtgccc gttaaaaaat tcttcatttg
     2221 ctgttacatt cttaatagcg gtaacttttt tgccttcttc aacagaaata actctatcta
     2281 ctaacaaaaa tggataacga tgaggcaaaa tctctttgat tttcttaata tctaacatat
     2341 acatccccca aaattcacat ttagaatcta ttacgctttt tatttgtaag tgagtcaagt
     2401 aaaatgccgg taccaagtgc cactacatct aaaggattct cagtaattaa aactgggacc
     2461 tttagctgtt cggacattaa ttcatctaaa ccatgtaata aagatccacc accagtcatg
     2521 atgattcctc tatcaataat atccgctgaa agctctggag gtgtttgttc caacacttgt
     2581 ttagcagcta ggaccattag gtgtaatgaa tcgtgaatcg cttcctccac ttcagaactt
     2641 gtaatagaaa ttgttttcgg taagccactc actaaatctc taccacgaat ttccattttc
     2701 tcttctttgg ctccttgaca tgcagtaccg attgttactt taatattttc agccgttctt
     2761 tcaccaataa gtaagttata tttacgttta acataattta aaatatctgc gtcccatttg
     2821 tttccagcga cttttactga ttgactagtt acaatatcac ccatagacaa tacagcaaca
     2881 tccgcagtac ctccaccaat atcaataatc atattaccgg aaggctcaaa aatctccata
     2941 cccgctccaa tagcagcaac tttaggttct tcttctaaga acacttgttt tccaccactt
     3001 ttttcagcaa cttcgcgaat tgctttttgc tcgacagaag ttatatttgt tggacaacaa
     3061 attaaaatac gtggccgtga aaaaaaagtt tttaaattta acttttgtat gaagaaacgc
     3121 aacatttctt gcacaatatc aaagtcagca ataaccccat ctttcatagg tttaattgcc
     3181 gtaatgtctc ctggagttct accaaccata tctcttgctt cagtcccaac ggctaaaact
     3241 tgtccagttt tattgttaat agcgacaact gcaggttcat taacgacgat tcctcttcct
     3301 ttaacatgaa ttaatacatt ggctgtacct aaatcgatac caacatcttt tgccatttac
     3361 attttaactc ctttcgtggt gtacacctaa ttttacatct cattctgaat tatagcataa
     3421 tttatgtgcg gctgaaatgt atattttata gcaatgcgga atttttcatg acaaataaaa
     3481 aaaccgcatc aagaagatac ggtttttaac atttaaattt agaataaaga cgctaagttt
     3541 gttacatcga ttttggaatc atctacacgt tccacatcag caccaagcgc ttgtagtttg
     3601 ccgtggaaat tattatagcc acgatcaagg tattttaact cagttacttg tgtatagcca
     3661 tctgcaacta aaccagcaag aataagcgct gctgctgcac gtaaatctgt cgcagcaact
     3721 tctgctcctt gtaatttagc tgggccagaa ataataacag aatgtccttc aattttcata
     3781 tcagcgttca ttctacgcat ttcttctaca tgcataaaac gattctcaaa aacagtttca
     3841 gtcatgatgc ttgttccttc actcagcatt tgaataacca tcatttgcga ttgcatatct
     3901 gttggaaaac ctgggtgtgg catcgtttta acatccacag cttttaattt atcaggacca
     3961 attacacgaa tcccattctc ttcttcaatg atttgaacgc ccatttcttc aagtttagca
     4021 attaacgaac taatatgctc gggaactgca tcttcaatta aaacatttcc accagtaatc
     4081 gcagcagcaa tcataaatgt tcctgcttca atacggtctg gaataataga atgttcagtt
     4141 gcagttaatt ctttaactcc ttcaattcta attacttctg ttcctgcacc gataactcta
     4201 gcacccattt ggttaaggaa gtttgctaag tcgacaattt caggttcacg agccacgttt
     4261 tctattactg tagtaccttc tgctagagta gcagccatca taatattttg tgtcgctcca
     4321 acacttggga aatctaagta tactttagca ccaactaatt tttcagcagt tgcttcaata
     4381 tagccatttt caattttcac gattgcgccc attgcttcaa aaccttttaa atgtaagtca
     4441 actggtcttg agccaattgc acatccacca ggtaaagcta cacgtgctga accagtacgt
     4501 gccaaaagtg gtcccattac aacaatggaa gcacgcattt tacgaacgta ctcaaaaggt
     4561 gcatcagaag tgatttctcc tgttgcattg actgttactt catcatttac aaaagaaaca
     4621 tctgcattta gatatttaag aacctcattg attgtgaata catcagacaa gtttgggaca
     4681 ttttttaata cgctagtacc tttactcgca agtaatgtag cagctattac cggtaataca
     4741 gcattcttgg caccttccat tttcacagaa ccatttaact gttttccacc gcgtacaata
     4801 attttttcca aaaagaaccc ctccgcgtta ctaataacta aatcatttat cgaattttat
     4861 taatcaaaat ttgaatttaa aacatatcta agtaattcta ccacttatca ccctaaaata
     4921 tcaactgatt ttaacgtaat attaaagttg ttataa
//
LOCUS       DASDYK010000152         4880 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.152, whole genome shotgun sequence.
ACCESSION   DASDYK010000152 DASDYK010000000
VERSION     DASDYK010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4880
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.152"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..573
                     /locus_tag="U0308_002698"
     CDS             <1..573
                     /locus_tag="U0308_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2317652.1"
                     /translation="GLEDSYVYILKKGIIKTSIISRDGREFNLNYINKMDIISLLKDE
                     YSQFANAPFNIRVESDTAELYQVDRVRFWKDVNRDVDLQIYVKDYYRTRLLQSIKKMQ
                     QMLMNGKLGAICTQLYELYTLFGVEIAPDQYLIDFLVSNEEIGHFCGINSASSVNRIF
                     QQLKKEGVITMQNRYIIIKKLDVIQENVIF"
     gene            complement(613..807)
                     /locus_tag="U0308_002699"
     CDS             complement(613..807)
                     /locus_tag="U0308_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003723550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317653.1"
                     /translation="MKISKPAYLVLLVVGLVFVFLGLSNIGISIFWDFSDLENLMVGS
                     LLIIIGLITLRIRYSFKKRG"
     gene            complement(874..1722)
                     /locus_tag="U0308_002700"
     CDS             complement(874..1722)
                     /locus_tag="U0308_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM2317654.1"
                     /translation="MNKNKTGWNIAKIIVGALIFSLAVNVFAIPNNLGEGGVTGLTMM
                     LYYLLGWTPAVTTFIFNGILLIIGYKFLDRMTIVWTIVAISFTSIFLHFSEPLAFVAN
                     QTIVAAIFAGLMMGIGMGLIMNGGGTTAGSAILAKIANKYLGWNTSYALLFFDLLVVI
                     PSVFVIGFENMLFTIVSLYISTKVLDFILEGYNPKKSVTIISDYYEEIATEIDANLER
                     GITLFNGQGFYMRQDKKILYIVISRDQLLPLTKIVNKYDEKAFFIINDVQSVVGEGFT
                     KQITSE"
     gene            complement(2052..2189)
                     /locus_tag="U0308_002701"
     CDS             complement(2052..2189)
                     /locus_tag="U0308_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014092656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317655.1"
                     /translation="MTKVILTIFAIIVPAFLGFILAYQIYKKKTATYMPLKNEFVHWA
                     K"
     gene            2340..3053
                     /gene="treR"
                     /locus_tag="U0308_002702"
     CDS             2340..3053
                     /gene="treR"
                     /locus_tag="U0308_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose operon repressor"
                     /protein_id="HEM2317656.1"
                     /translation="MNKKNKFFDIYLELEQDITSGVYPAGTLLPSENVLAKRFSVSRE
                     TIRKALVLLLENGCIQKLQGKGSIVIDRERYSFPVSGLTSFKELQKSEHMNATTEVIR
                     NERTTLPDRIADFAGLPHGSNCLAILRVRYLEGEATILDYDYLLDKTEPIANEILEDS
                     LYQYLENEKGYEISYAQKEITVEPLNAEDKKYLALHGDTHVVVVKSTVFLKDTTLFQY
                     TESRHRLDKFRFIDFARRR"
     gene            complement(3084..4730)
                     /gene="treC"
                     /locus_tag="U0308_002703"
     CDS             complement(3084..4730)
                     /gene="treC"
                     /locus_tag="U0308_002703"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HEM2317657.1"
                     /translation="MTKFAQKTIYQVYPKSFYDTTGDGTGDIPGITAKLDYLQKLGIE
                     MIWLNPFYPSPQNDNGYDIADYTAVDPLFGTMDDVTTLIKEAKKRNIGIMIDLVLNHT
                     STEHPWFKKALAGDPFYRDFYYFRPAKADGSPPTNWVSKFGGNAWEKLPDSSEYYLHL
                     YDVTQADLDWANPNVREALFDVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGRR
                     FYTDGPGIHAYLKELHERTFGDKPIITVGEMSSTDIDNCIRYSNPDEKELSMVFHFHH
                     LKVDYPDGEKWRLADVNFENLKSIFHTWQVAMSEENGWDALFWNNHDQPRALGRFASD
                     KPEHYYHSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTIDDYVDVETLNHFDILQK
                     NGLSEQEVMAIIKERSRDNSRTPMQWDDSQNAGFTTGTPWLKVADNASEINVQAALSN
                     KTSIFYFYQKLIALRKEYPVIQTGDYTPYWTDEDLIIAYKRSNEITSLLSIHHFGSTT
                     KKIQLPNEFLNAKVLLSNYERQTISSELELAPYETLTLIR"
BASE COUNT         1644 a          909 c          849 g         1478 t
ORIGIN      
        1 ggacttgaag attcatatgt gtacatactt aaaaaaggga ttattaaaac gagtattatt
       61 tcaagggatg gcagggaatt taatttaaac tacattaata aaatggacat tatctcactt
      121 ttaaaagatg agtattcgca gtttgccaat gcgccgttta acattcgtgt ggagtcagac
      181 acagcagaac tatatcaagt tgaccgggta aggttttgga aagacgtgaa tcgtgatgtg
      241 gatttgcaaa tttatgtgaa agattattac cgtacgaggc tgctacaatc cataaaaaaa
      301 atgcagcaaa tgctaatgaa tgggaaactt ggagcaattt gtacgcaact ctatgaactt
      361 tatacgcttt ttggagtgga aattgcgcct gatcagtatt tgattgattt tctagtaagt
      421 aatgaagaaa ttggtcattt ttgcgggatt aactccgcaa gcagtgtgaa ccggattttc
      481 caacaactca aaaaagaagg cgtcattacg atgcaaaacc gctatattat tattaaaaaa
      541 ttagatgtta ttcaagaaaa cgttattttt taacagtaga aaagcactgc aatcaatatt
      601 tgcagtgctt ttctatcctc tttttttaaa tgaatatcga atcctaagtg tgatgagccc
      661 gatgatgatt aataaactac caaccatcaa attctctaag tcgctaaaat cccaaaaaat
      721 agagattccg atattagata gtcctagaaa aacaaaaacc aagccaacaa caagtaaaac
      781 caaataagcc ggtttagaaa ttttcataag gacgcctcat ttacattaaa aataatttcc
      841 acattattgt aacataagtt gagagaaacg acatcactca cttgttattt gttttgtaaa
      901 gccttccccc acaacacttt gtacatcatt aataataaag aatgctttct catcatattt
      961 gttgacgatt ttggtgagcg gcagtaattg atcacgactt attacgatat aaagaatttt
     1021 tttatcttga cgcatataga aaccttgacc gttgaaaagg gtaataccac gctctaaatt
     1081 cgcatcaatt tcagttgcaa tttcttcata ataatccgat ataatcgtga cagatttttt
     1141 aggattgtaa ccttcaagaa tgaaatcaag tactttggtt gaaatataaa gcgaaacgat
     1201 ggtaaatagc atgttttcaa aaccgattac aaaaacagaa ggaataacaa caagtaaatc
     1261 aaagaatagc aacgcataac tcgtattcca accaagatat ttattagcaa ttttcgctaa
     1321 aatagcgcta ccagcagtag ttccgccacc attcataatt agtcccatac caattcccat
     1381 cattaatccg gcaaaaatgg ctgcgacaat cgtttgattt gccacgaaag caagcggctc
     1441 agaaaaatgt aaaaagatcg aagtgaaact aatagcaaca attgtccaga caatcgtcat
     1501 tcgatcaaga aacttgtaac caataataag taaaatacca ttaaatataa aagtagtgac
     1561 tgcgggagtc caaccaagca agtaataaag catcattgtt agcccagtaa cgccgccttc
     1621 tcctaaatta ttcgggatag caaaaacgtt gacagctagc gagaaaataa gcgcccccac
     1681 gataattttt gcgatgttcc aaccagtttt atttttgttc atctccattt ctcctttcca
     1741 tgcaaaaaaa gacccaagaa taccactaaa caggcactct ggagtctttt tataaaaaaa
     1801 gcattaactg acatctttgt cattaattgt ctcaccataa aaaattgcta ttcatttcaa
     1861 cacaatttac aatataccat aaaaaataag caccttcaag cctttttaag tataagtaat
     1921 tagccgaaaa tcgctaaaaa tggcattaaa ttaagtagaa ataaacctac aagaacacta
     1981 ataacaattt tgatgacaag tggtttttca ctttctgttt ttttcaattt gttttcctcc
     2041 ttaatgtgcg cttatttagc ccaatgtaca aattcatttt ttaatggcat ataagtggct
     2101 gtttttttct tatagatttg gtaagcaagt ataaatccga gaaacgcagg aacgataatt
     2161 gcaaaaatag ttaaaataac tttagtcata gaaaatacct cctcttaaat caaaacacat
     2221 gttcagacct tactactaat agtgtaccaa atttcacgtg attttggtaa taaagcgagc
     2281 tagcaaattt cggttacaat tatgggtaaa tgtgctacaa tagccttggg tgagtaaatt
     2341 tgaataaaaa aaataagttt tttgacattt atttagaatt agagcaagac attacatcag
     2401 gcgtttatcc agcaggcaca ctacttccaa gtgaaaatgt cctggcgaag cgtttttcgg
     2461 tatcccgtga gaccattaga aaagcacttg tattattgct tgaaaacggc tgtattcaaa
     2521 agctccaagg aaaaggatcg attgtcattg accgagaacg ctattctttt ccagtctctg
     2581 gtttaactag ttttaaggaa ttacaaaaat ccgaacatat gaatgcgaca acggaagtca
     2641 tccgaaatga acgaaccact ttaccagatc gaattgctga ttttgctggt cttccgcacg
     2701 gctcaaactg cttagctatc ctcagagtgc gctatttaga aggagaggca actattttgg
     2761 attacgatta tttattagac aaaactgaac caattgcgaa tgagatttta gaagactctt
     2821 tgtatcaata cttagaaaat gagaaaggct atgaaatcag ttatgctcaa aaagaaataa
     2881 ccgtggaacc gctgaacgcc gaagataaaa aatacttagc attacatggt gatacgcatg
     2941 tagttgtcgt aaaaagtacc gtgtttttaa aagatacaac actttttcaa tacacagaat
     3001 cgcgtcaccg actggataaa ttccgtttta tagattttgc aagaagacgc taaaaagcct
     3061 gagaattgtt tctcaggctt tttttatcga attaaagtta atgtttcata aggtgctaat
     3121 tccagctcag aactgattgt ttgacgttca taattagaaa gaagtacttt agcatttaaa
     3181 aactcatttg gtagttgaat ttttttcgta gtcgagccaa aatggtgaat ggaaagaagc
     3241 gaagtaattt catttgaacg cttataggct ataatcaaat cttcatccgt ccaatatggc
     3301 gtataatcac ccgtctgaat gacagggtat tctttccgta atgcaataag cttttggtaa
     3361 aaatagaaaa tgctcgtttt attagataag gctgcttgaa catttatttc acttgcatta
     3421 tccgctactt ttagccatgg agtaccagtt gtaaagccag cattttgcga atcatcccat
     3481 tgcataggtg tccgactatt atctcgcgaa cgctctttga taatcgccat aacttcttgc
     3541 tcactaagtc cgtttttttg taaaatatca aaatggttga gcgtttccac atccacataa
     3601 tcatcaatcg taggaaattt tggattcatc atcccgattt cttcccccat ataaacaaac
     3661 ggtgtcccgc gcataaagtg aatcgttgcg ccaaggaggg ttgccgaatg ataataatgt
     3721 tccggtttgt cggaagcaaa gcgaccaagt gctcgaggtt ggtcatggtt gttccagaaa
     3781 agcgcatccc atccattttc ttctgacatc gcgacttgcc acgtatggaa aatagatttt
     3841 aagttctcga aattcacatc cgctaaacgc catttttctc catcaggata gtctaccttc
     3901 aaatgatgga aatgaaaaac catcgataat tctttttcgt ctggattact ataacgaatg
     3961 cagttgtcaa tatctgtaga ggacatttct ccaaccgtta taattggctt gtcgccaaaa
     4021 gttcgttcat gtagttcttt taagtaagca tgtattcctg gtccatctgt ataaaaacgg
     4081 cggccgtcgc cttcaaaatc atcttctaaa aacttaggtt tggcaatcac atttaataca
     4141 tctaaacgaa aaccttccac gcctttatca atccaaaaat tcacgacatc aaagagtgcc
     4201 tcgcgtacat tcggattggc ccagtctaaa tcagcttgcg taacatcgta taaatgcaaa
     4261 tagtactcag aggagtcagg caatttttcc caagcattac caccgaattt ggaaacccaa
     4321 tttgttggag gggaaccatc ggcttttgct gggcggaaat agtagaaatc acgatagaat
     4381 ggatcaccag caagcgcttt tttaaaccaa ggatgctctg ttgaagtatg attcaatact
     4441 aagtcaatca taataccaat atttcttttt ttcgcttcct tgataagcgt tgtcacatcg
     4501 tccatcgtac caaataaagg atcaaccgcg gtatagtcag cgatatcata gccgttatca
     4561 ttttgcggag aaggataaaa tggattcagc caaatcatct caattccgag tttttgtaaa
     4621 taatcaagct tggcagtgat accgggaata tccccagtac catcgccagt cgtatcataa
     4681 aaggatttcg gatacacttg ataaattgtt ttttgagcaa actttgtcat aaagggaagc
     4741 ctcacttttt agttggttgt ttttgcagat tcacgatact cctttttacc aaacgtacga
     4801 attggtgcag tatctacttt gtttaaaata ttatatttgc ggaataatac agttagaatg
     4861 aaaggaacaa caatcgttat
//
LOCUS       DASDYK010000153         4865 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.153, whole genome shotgun sequence.
ACCESSION   DASDYK010000153 DASDYK010000000
VERSION     DASDYK010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4865
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.153"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            136..495
                     /locus_tag="U0308_002704"
     CDS             136..495
                     /locus_tag="U0308_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317658.1"
                     /translation="MKKPSIIFIFCTLLFVTACSTSENQTQATEATGTIEQVETDAIL
                     INNFKEKKDKYNPEATIRFDIVDKYYDETGNKIKITDLNKNDDVKIILTNDFPIQETS
                     PAPIDPKYVQKIILLNK"
     gene            617..1039
                     /locus_tag="U0308_002705"
     CDS             617..1039
                     /locus_tag="U0308_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2317659.1"
                     /translation="MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDL
                     NWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKK
                     VRELLVYKIDSYDSHIAQFKAGELNADNVEKLWKRDKF"
     gene            1061..1912
                     /locus_tag="U0308_002706"
     CDS             1061..1912
                     /locus_tag="U0308_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2317660.1"
                     /translation="MKTVKLNNGVEVPILGFGTYQITDAAEAEQAVKDAIETGYRHID
                     TAQSYMNEEAVGRGIVASGVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYID
                     LLLIHQPFNDVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFNEVTPQVNQIEV
                     NPFQQQAANLAVLRKEGVAIEAWAPFAEGKNDIFNNPVLTKIGAKYGKSAAQVILRWL
                     VEQDIIVLAKSVKPERMAQNLAIFDFELTEADKGEIASLDQGESQFFSHADPEMVKWM
                     ASRKLNV"
     gene            complement(1953..3479)
                     /locus_tag="U0308_002707"
     CDS             complement(1953..3479)
                     /locus_tag="U0308_002707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2317661.1"
                     /translation="MDRKFIKPGIILLIVAFLVVSINVGAETGGSRTAQVNLTTSQQA
                     FIDEILPAAQDGYRDGKLLTSVTLAQAILESNWGESGLSQNSNNLFGIKGTYKGESVS
                     MGTMEASGSTTANFRVYPSWKESIEDHTALITENARYQDAVGETNYRKALQAIKDGGY
                     ATDPDYVSKLVAIIERYNLDKYDIIYDKIESNQSLAAIGTVAENKEQEVIWSAPYNTE
                     NANKIGTLENYLGRNLEISWEAKTEKGLWYFIRENNKDIGWINSNALKISYHQKEDEN
                     VHLTKYVDDLSAHVYRLPSPEKQFDNGTIAKYDRKALEVDKKITRGGYAWFRISEGEK
                     VIGWVRADKLNDRLYDRITEQTSYDGYALVSKSATDNVWTAPFNTKNAEKLAPFADYD
                     NEKLELVTRAKAGNTLWYQFKVDGKLVGWASEKDLNVFYTPAKEEPVKQVAYVKDPTA
                     KLYNKPVESTSTNPKAVGFYYGKLLAVDKTATILGEDWLHLKDRQNSLGWIKAIDINS
                     "
     gene            3748..4776
                     /locus_tag="U0308_002708"
     CDS             3748..4776
                     /locus_tag="U0308_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEM2317662.1"
                     /translation="MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIA
                     LADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKF
                     LAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPRKENGQ
                     IIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGT
                     GDVALDIHTLIPKCNELIVTTPHYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLAD
                     GQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSALFNSSSTSGKAYKTLA
                     EKIIPYLS"
BASE COUNT         1593 a          890 c          946 g         1436 t
ORIGIN      
        1 gttagttttc tatttaatga ttaatcagtt tggaaatttc ggtatgactt tagttattca
       61 gtacatttta tgctatgatt taagtgtcaa tatttactgg attaaaacaa gagagataaa
      121 aaggagcccc acaccatgaa aaaaccctca atcattttta ttttttgcac attactcttt
      181 gtaacagcat gctcaacctc cgaaaaccaa acacaagcca ccgaagcaac cggcacaata
      241 gaacaagttg aaacggatgc aattctaatt aataatttca aagaaaaaaa ggataagtat
      301 aatccggaag ccacaatacg ctttgacatc gtagataaat attacgacga aacgggaaat
      361 aaaataaaaa taaccgactt aaacaaaaac gatgacgtaa aaattatttt aaccaacgat
      421 ttcccaatcc aagaaacctc gccagcccca atagacccaa aatacgtaca aaaaatcatc
      481 ctgctaaaca aataaaactc tctcgtccgc agagagtttt ttcttttctc aaaaaaataa
      541 actcaaattc cttgccttgg tgtgaactcc agggtttata attctatatg taaagaacga
      601 aacgaggtga tggaggatga atatcaaaca agcggctgat atgtttggtt taacagtaga
      661 tacgttgcgt tattatgagc gggtcggtgt tattccgcca gtccatcgta acgaaagtgg
      721 ttaccgggac tataaaacga gtgacttgaa ctgggtttat ctcgtgaaga atttacggaa
      781 tgcgggatta tcggtagaat cgttaattga gtttgcgaca cttgcgcagc tcagagagac
      841 gcaaaatgtc gaagcggcgc aaaaacaagt actggttgac caactaaaag aattagacga
      901 aaaattagcc gagatgaaga aggtcagaga actactcgtg tacaaaatcg attcgtacga
      961 tagtcacatt gcgcagttta aagctggcga attaaatgca gataatgtag aaaaattatg
     1021 gaaacgggac aaattttaaa gataagagga ggattttcaa atgaaaacag tgaaattaaa
     1081 caatggtgta gaagtaccta ttttaggatt tgggacatat caaattacag atgctgctga
     1141 agcggaacaa gcagtaaaag atgcgattga aacgggctat cgtcacattg atacggcgca
     1201 aagttatatg aatgaagaag ctgtaggtcg cggaattgtg gcatccggcg tcgatcgcaa
     1261 agaactattc attacgacaa aaatatgggt ggaaaatgta agttataaag gtgttatgag
     1321 ctcatttgac cggtcgttaa aacgtttagg gttggattac attgatttgc tgctaattca
     1381 tcaacctttc aacgatgtat acggggcatg gatagcgatg gaggaattac aagcatcagg
     1441 aaaaattaga gcaattggcg tatcgaattt tagcccggat cgcgtaattg acctagctgc
     1501 gttcaatgaa gtaactccgc aagtcaacca aattgaagtt aatcctttcc aacaacaggc
     1561 agcgaatcta gctgttttaa gaaaagaagg ggttgcaata gaagcatggg caccgtttgc
     1621 ggaagggaaa aatgatattt ttaataaccc agttttaacg aaaattggtg cgaaatatgg
     1681 aaaatcggcc gctcaagtaa ttttgcgttg gctagtagag caagatatta tcgtcttagc
     1741 taaatctgta aaaccagaaa gaatggcgca aaatctggct atatttgatt ttgaattgac
     1801 ggaggcagat aagggagaaa ttgccagcct agatcaaggg gaaagccagt tcttctcaca
     1861 tgcggatcca gaaatggtga aatggatggc tagtcgcaaa ctgaatgtat aaacgaaaaa
     1921 aggttctgcg taaatgcaga cccttttttt atttaactat tgatgtcgat agctttaatc
     1981 catcctagtg aattttgtct gtctttaaga tgcaaccaat cttcaccaag aatggttgct
     2041 gttttatcca ctgctaataa ttttccataa tagaagccca ctgcttttgg gttagtactt
     2101 gttgattcta caggtttgtt ataaagtttt gctgttgggt ctttcacgta agcgacttgt
     2161 tttactggtt cttctttagc gggagtataa aatacattta agtctttttc gctagcccat
     2221 ccaacaagtt ttccatctac tttaaactga taccaaagtg tatttccggc tttagctcga
     2281 gtcactagtt ctagtttttc gttatcataa tctgcaaatg gtgctaattt ttctgcgttt
     2341 tttgtgttga atggtgcagt ccatacgtta tcagttgcag atttacttac tagagcatag
     2401 ccatcgtaag aagtttgttc tgtgatgcga tcataaaggc gatcattcaa cttatccgcg
     2461 cgaacccagc caattacttt ctcgccttct gaaattcgga accaagcata gccgccgcga
     2521 gtgatttttt tatctacttc aagggctttt ctatcgtatt ttgcgatagt tccattatcg
     2581 aattgttttt cagggcttgg tagacgatat acatgtgcgc ttaaatcatc tacatatttg
     2641 gttaaatgaa cattttcatc ttctttttga tgatagctga tttttaaggc attactattt
     2701 atccaaccaa tatctttgtt gttctcgcga ataaagtacc atagaccttt ttctgtttta
     2761 gcttcccagg aaatttctaa gttacgccct aagtaatttt cgagggtccc gattttatta
     2821 gcattttctg tattgtacgg tgccgaccaa ataacctctt gttctttatt ttcagctact
     2881 gttccaattg ctgctaagga ttgattagat tcgattttat cgtaaatgat atcgtattta
     2941 tctaagttgt aacgttcaat aattgctact agtttagaaa cgtaatctgg atcagtcgca
     3001 taaccaccgt ctttaatagc ttgcagtgct ttgcggtagt tcgtttcacc gacagcgtct
     3061 tgatagcgcg cattttcagt aatcaaagct gtgtggtctt caatggattc tttccaacta
     3121 ggataaacgc ggaaattagc ggttgttgag ccggatgctt ccattgtccc catggagaca
     3181 gactcacctt tatacgttcc tttaattccg aataagttat tagagttctg gcttagacca
     3241 ctttcacccc aatttgattc taaaattgct tgagcgagcg ttacacttgt aagcaattta
     3301 ccatcgcgat atccatcctg agccgctggt aaaatttcat caatgaaagc ttgttgtgaa
     3361 gtagtcagat taacttgagc tgttctgcta cctcctgttt ctgctccaac atttatggaa
     3421 actaccaaaa atgccacaat tagcagaatt atccctggtt ttataaactt tctatccaaa
     3481 tttcaatgca ctccttttta tatatctgca actatattat caaaaaatgc caaaaaattt
     3541 ctattacatt tctatgacga aaaacaataa ctacgccaaa cctattggga cgtaaggact
     3601 aaagctggaa atgttaaata tgtaaaattt gtgaaatttt cttcaacaaa cttttgtacc
     3661 gaaaagacaa gcaatatgtg aaataataaa acggtcatgc tataataatc agtatgtcag
     3721 cgcattcatt tttggaggtt tttatatatg ttaaacgaac aacaaattac tagattgcta
     3781 tatagattgc aagatcctgt tttagaggca agcttagaag aaacagaagg tgttttagaa
     3841 gtgcaagtgc ttgaagaaac agcaaacatc aaaatcgcat tagctgatcc agcagtagaa
     3901 acggatcatt ttgttcataa tatagaagaa cttctcaccc aattcggcgt aaatgaaata
     3961 aatattgagc tagaatacct acccgcagca gttattgacc gcattttcca agcaagagat
     4021 aacatactct cagaagctag tgaaacgaaa ttcttagcaa tagcgagtgg taaaggtggc
     4081 gtcgggaaat caactgtctc tgcgaatctt gcaatcgcct tagcacaaca aggcaaaaaa
     4141 gtaggattat tagacgcgga tatatatgga ttcagtattc ctgtactgct aggaacaacc
     4201 gaatcccccc gcaaagaaaa tggtcaaatc atcccagtcg aaacacacgg cattcaaatg
     4261 atttctatgg atttttttgt ggaacaagga gaaccagtta tctggcgcgg accaatgcta
     4321 gggaaaatga ttaaaatgtt tttagaagaa gtaagatggg gaaaactaga ctatttactt
     4381 atcgatttac cacctggaac tggagatgtt gcgctagata tccatacgct tatcccgaaa
     4441 tgcaatgaac ttattgttac aacaccacat tatgcagccg cgtcagtcgc atctcgagca
     4501 ggatatatgg cagcaaaaaa caatcacaaa atcatcggtg taatcgaaaa tatgtcttat
     4561 cttactttag ctgatggaca agtattaaaa gtattcggac aaggcggcgg cgaaaaagtt
     4621 gctgcagact tagaaacaca acttttaatt caactgccaa tagaacaacc agaaccaaat
     4681 ggaaatggct atgtatcagc ccttttcaac tcttcaagca cttcaggaaa agcatataaa
     4741 accctagcag agaaaataat tccatattta tcataaaaac tttgtaaaaa gtattgacga
     4801 aaggcaaaaa tcttggtata tttataaacg ttgctgatgc ggacaaaacg ctttcgcaac
     4861 aaaag
//
LOCUS       DASDYK010000154         4853 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.154, whole genome shotgun sequence.
ACCESSION   DASDYK010000154 DASDYK010000000
VERSION     DASDYK010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4853)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4853)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4853
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.154"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..202)
                     /locus_tag="U0308_002709"
     CDS             complement(<1..202)
                     /locus_tag="U0308_002709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM2317663.1"
                     /translation="MNWLEKLKENDTARRVLVFVLLGIVLYLLRSMIDLILLTFIFAF
                     LVTRLENVILKRVRVPRKLIVIV"
     gene            324..1013
                     /locus_tag="U0308_002710"
     CDS             324..1013
                     /locus_tag="U0308_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HEM2317664.1"
                     /translation="MVEKIERKSLAEQVYDQIKAEITNGTWKIGERIPKEADLMAEFG
                     ISRNTLREAIRALSHIGLLETKQGDGTFVRNNSELNAIMQRRVRESTVQEILEIRHAL
                     DREAVILACDRRTEEDVKTLEKYRHQCQLATEKNDVGAFVKADSALHLTIVKAAHNDL
                     LLDMYVNILEEIQFSITSTTEMSPEANQHNGHAALVKAIEKRNKEQAAHEVTEYITLF
                     KRIDAKNGEKK"
     gene            1010..2227
                     /locus_tag="U0308_002711"
     CDS             1010..2227
                     /locus_tag="U0308_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CynX/NimT family MFS transporter"
                     /protein_id="HEM2317665.1"
                     /translation="MNSDLTNKKILTRSSKVMLVLGIILIAANLRTPITSVGPLLGMI
                     QSDLHLTNTMAGLLTTIPLLAFAGLSPFVSKLSRALGIEVLIFVALLTLVLGSLLRPF
                     GGELNLFAGTFMIGLAIAVGNVILPSLIKKEFPFKLGLMTGVYSISMNLCAAIAAGLT
                     VPIAMNNRFSWHGSMVFWAILGIVALVIWLPQLKYNQRSTEKIATHLVTTSVWKSPLA
                     WKISLFMGSQSAIFYISIAWLPNILADQGLSSTSSGLMLSLMQFAVMPITFIIPIVAG
                     RMKNQQLLVGISILFFLIGIFGIMFASGSVLILSIAIIVYGIGSGMSFSLSMMFFNLR
                     TTSATESADLSGMAQSIGYLFAASGPILFGTLHDALGSWQPTLYVLVGITMLMLYCGL
                     DAGRNKFLFPQKK"
     gene            complement(2426..2653)
                     /locus_tag="U0308_002712"
     CDS             complement(2426..2653)
                     /locus_tag="U0308_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3006 domain-containing protein"
                     /protein_id="HEM2317666.1"
                     /translation="MKKAILDRIEDGKAVFLLEPDQTEWQIDKEKLDSSIKEGDVVTF
                     SETNEIMKHPQETEEMKNRIAEKLERLRGRN"
     gene            complement(2663..3793)
                     /locus_tag="U0308_002713"
     CDS             complement(2663..3793)
                     /locus_tag="U0308_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2317667.1"
                     /translation="MTKKLVICISLIAIFLSGCSFSEPSTSKSNITEKTLNGASFTFF
                     DVGQGDSTLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNA
                     DKVIATYKPKEIWMDGLTFSSSIYEKVIDAALASDAKYKEPRRGEKATFGPFNLEVLS
                     PDKLENDANNDSIAVKITYKDISAIFTGDAEKGREREMVDSGADLEADILDLGHHGSS
                     TSNQPFFLDKVKPQVAVYSAEMANSYGHPHVEVLEWLKERDIKTYGTDVNGTVIIETD
                     GEKIHVQTEKSGTPKAGSSYNKENSTQKTEDATSEELPDSINLNTASSEELQLLPLIG
                     PALAEKIIAERPYQSIDDLKKINGIGDGIVRQIKEQGIAVTK"
     gene            complement(3906..4208)
                     /locus_tag="U0308_002714"
     CDS             complement(3906..4208)
                     /locus_tag="U0308_002714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesB/YadR/YfhF family protein"
                     /protein_id="HEM2317668.1"
                     /translation="MNIEVTDQANKWFHDEFDVANGNGIRLFAKYGGSNSSLHPGFSI
                     GLTAEKPQEAAVAEKKEDLIFFIEDHDYWYFKDHDWKIDYEPKTEEVLFSFKEKVK"
     gene            complement(4442..>4853)
                     /gene="fri"
                     /locus_tag="U0308_002715"
     CDS             complement(4442..>4853)
                     /gene="fri"
                     /locus_tag="U0308_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="non-heme iron-binding ferritin Fri"
                     /protein_id="HEM2317669.1"
                     /translation="NVFTVKIHQIHWYMRGHNFFTLHEKMDDLYSEFGEQMDEVAERL
                     LAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLMEDLVGTLELLRDEYQQGIELTDK
                     EGDNVTNDMLIAFKASIDKHIWMFKAFLGKAPLE"
BASE COUNT         1374 a          915 c          882 g         1682 t
ORIGIN      
        1 gtacaatgac aattagcttt cttggtacgc gcaccctttt caaaataaca ttctctagtc
       61 gtgttactaa aaatgcaaaa atgaatgtta gtaaaatcaa atcaatcata cttctgagta
      121 aatataaaac aatgcctaga agaacaaaca ctagcacccg tcttgcagtg tcgttttctt
      181 ttagcttttc taaccaattc atattttcac cagccctttt cttccttcat tttatcatag
      241 tttaacaaaa taaggtttac aaaaaaagaa ttcttccgta aaatagaacc aatcatccta
      301 cctttagaaa tggagtgaat agtatggtag aaaaaattga acgcaaatcg cttgcagagc
      361 aagtttatga tcaaataaaa gcagaaatta ctaacggtac ttggaaaatc ggtgaacgca
      421 ttccgaaaga agcggattta atggctgaat ttggcattag tcgtaatacg ctacgtgaag
      481 ccattcgtgc cctatctcat atcggtttac tggaaaccaa acaaggtgac gggacttttg
      541 ttcgtaacaa tagtgaacta aatgctatca tgcagaggcg tgtccgcgaa tccacggttc
      601 aagaaatcct ggaaattcgg catgcgcttg acagagaagc agttattctg gcctgtgatc
      661 gacgcacgga agaagatgta aaaacactag aaaaatatag acaccaatgc caactagcga
      721 cggaaaaaaa tgatgttggt gcttttgtga aagctgattc tgcccttcat ttaacaattg
      781 taaaggcagc tcataacgat ttgttgttag atatgtatgt caatatttta gaagaaatac
      841 agttttccat cacgagtaca accgaaatga gcccagaagc taatcagcat aatgggcacg
      901 ctgcgcttgt caaagcgatt gaaaaacgaa ataaagaaca agcagctcat gaagtaacag
      961 agtatattac tcttttcaaa cgaattgatg ctaagaatgg agaaaagaaa tgaattcaga
     1021 tttaaccaat aaaaaaatcc ttacacgctc gagtaaggta atgcttgttt taggaattat
     1081 tttaattgcg gcaaacttac ggacaccaat tacctctgta ggtccgttac ttggaatgat
     1141 tcaatcagat ttacatttaa ccaatacgat ggctggatta cttacaacaa ttccgctact
     1201 tgcatttgca ggactatccc cgttcgtttc taagctaagt cgagcacttg gtatagaggt
     1261 attaattttt gtagcactat tgacacttgt acttggtagc ttacttcgac cttttggggg
     1321 cgaactcaat ttatttgctg gaacgtttat gattggtctt gctattgctg tcggaaatgt
     1381 cattttgcca agtttgataa aaaaagaatt tccatttaaa ttgggtctaa tgactggagt
     1441 ttattccatt tcgatgaatt tgtgtgcagc gattgcagct ggcttaacgg ttccaattgc
     1501 tatgaacaat cgctttagct ggcatggaag tatggttttc tgggcaattc ttggaatcgt
     1561 tgctttagtc atttggcttc cacagttaaa atataatcaa cgctcgacgg aaaaaattgc
     1621 aactcacttg gttacaactt cggtttggaa gtctccgctt gcgtggaaaa tttctttatt
     1681 tatgggttcg cagtcagcaa ttttttatat ttcgattgcc tggttaccaa atattttggc
     1741 ggaccaagga ttatctagta cttctagtgg cttaatgctc tccttaatgc agtttgcggt
     1801 tatgccgatt acgtttatta ttcctattgt tgccggacga atgaaaaatc agcaattact
     1861 agttggaatt tctattttat tctttttaat tgggattttt ggcattatgt ttgcttctgg
     1921 tagcgtgctt attttatcga ttgctatcat tgtatacgga attggttcgg ggatgtcatt
     1981 tagtttgtcg atgatgttct ttaatttgcg aacaacaagc gctaccgaat cagcggatct
     2041 ctctggaatg gcgcaatcta tcggttactt gtttgccgct tccggtccga tattatttgg
     2101 taccctgcat gatgcgcttg gtagctggca accaacctta tatgttttag tcggtattac
     2161 catgcttatg ctatactgcg gcctagatgc tggacgcaat aaatttctct ttccacagaa
     2221 aaagtgattt ttgcgcataa aaaaactagt gcggaaaaag ggagtaaacc gcactagcta
     2281 aaagggagtt tgggattttc attctaaaaa gggaaagaaa tgaaaatgtt ttgcttgttg
     2341 ttagcttata catataataa cttttcaaaa aaagaatgtg ctgaaagaaa gatgataatt
     2401 tcatgagagt ttaaaaaagt ttttctcagt ttctccctct taatctttct agcttttctg
     2461 caattctatt tttcatttct tccgtttctt ggggatgttt cattatttca ttagtttctg
     2521 aaaaagtgac gacatctcct tcttttatgg atgaatcgag cttttctttg tcaatttgcc
     2581 attctgtttg gtctggttct aataaaaaaa ctgctttgcc atcttctatc cgatctaaaa
     2641 ttgctttttt caccctaatc acctactttg ttacggcaat gccttgttct ttgatttggc
     2701 gcacaatgcc atcgccaatg ccgttaattt ttttcaagtc atctatggac tgatatggtc
     2761 gctcggcaat gattttttct gcaagcgctg gcccaattag tggtaataat tgtaattctt
     2821 cactagatgc tgtatttaaa ttaatgctgt ctggtaattc ttctgatgtt gcatcttctg
     2881 ttttttgcgt gctattttct ttattatagc tgctacctgc ttttggtgta cctgattttt
     2941 cggtttgcac atggattttt tcaccgtctg tttcaatgat taccgttcca ttcacatctg
     3001 ttccatatgt ttttatatca cgctctttta accactccag cacttccaca tgaggatgtc
     3061 cgtaactatt ggccatttca gcagagtaaa cagccacttg gggttttact ttatctagga
     3121 aaaatggctg gttggatgtg gacgatccgt ggtgccctaa atctaaaata tccgcttcta
     3181 aatcggcacc gctgtctacc atttctcttt ctcgaccttt ttctgcgtca cctgtaaaaa
     3241 tagcggaaat atctttatag gtgattttta cagcgataga atcattatta gcgtcatttt
     3301 ccaatttatc agggcttaaa acctctagat taaatggacc aaaagtcgct ttttcgccgc
     3361 gtctcggttc tttgtatttg gcatctgaag ctaatgctgc gtcaattact ttctcgtaaa
     3421 tactactaga aaaagttaag ccatccatcc aaatttcttt cggtttgtat gtagcgatta
     3481 ctttatcagc attaccgata tggtctgcgt gcgggtgtgt cagtagcagc aaatctattt
     3541 tctttatatt cgcttctttt aaataggtta aaatacggtc atcatcttgg cgacctgtat
     3601 caatcaaaat agttgtacca tcttctgctt ggataagtgt gctatcccct tggccaacat
     3661 caaaaaatgt aaaacttgca ccattcaatg ttttttcggt aatgttcgat ttactcgttg
     3721 atggttcgga aaaactacaa ccgcttaaaa atatcgcgat taaacttata cagattacta
     3781 atttctttgt catctttctc ctcctgctct cttagtagaa tagcaaagga aggcgaaaca
     3841 gtaaagtttt taaaacaaaa accgcctgaa atcaatttga ttacacgcgg tcatttatgt
     3901 tggattcatt tcactttttc tttaaaggaa aaaagtactt cttccgtttt tggttcatag
     3961 tcaattttcc agtcgtggtc tttgaaatac caatagtcat ggtcttcaat gaagaaaatt
     4021 aagtcttctt tcttctcagc gactgctgct tcttgcggtt tttcggcagt taaaccgata
     4081 gagaaaccag gatgcaagga actgttagaa ccaccgtatt tcgcaaaaag tcgaattcca
     4141 ttaccattag ctacatcaaa ctcatcatga aaccatttat ttgcttggtc cgttacctcg
     4201 atattcatac ttttcactcc tcgtttccaa ttttttcgta atgattgtta ttcaagaata
     4261 gcagatttct tggtgaattt cactttttct gctttttgtt atgaagataa tatacctctt
     4321 tcaaagaaac tttaaaccac attgtgttaa gacaatgtaa aaataaggaa attgtactat
     4381 aacagactgg ggcaaaaaaa actgtgtgag acgattaatc ccacacagtt tttataactc
     4441 tttattctaa tggcgctttt cctaagaatg ctttgaacat ccagatatgt ttgtcaatgc
     4501 ttgctttgaa agcaattaac atatcgtttg ttacgttgtc gccttctttg tcagtaagct
     4561 caataccttg ttgatattcg tctctaagta attctaatgt tccaactaag tcttccatta
     4621 attgatccat tgtttttggt ttcgtataag gagcttcttc aacgctcgca ttttctaaaa
     4681 actcttttaa agtcgagaat ggacttccgc cgattgctag taagcgttct gctacttcgt
     4741 ccatttgttc gccgaattcg ctatataaat catccatttt ttcatgtaaa gtgaagaagt
     4801 tgtggcctct catataccaa tgaatttgat gaatttttac tgtgaatacg ttt
//
LOCUS       DASDYK010000155         4746 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.155, whole genome shotgun sequence.
ACCESSION   DASDYK010000155 DASDYK010000000
VERSION     DASDYK010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4746
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.155"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..675)
                     /locus_tag="U0308_002716"
     CDS             complement(<1..675)
                     /locus_tag="U0308_002716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEM2317670.1"
                     /translation="MGLNIPPKPESSLWTDDQWKAIQAEGNNVLVAAAAGSGKTAVLV
                     TRIIEKLINESANLNVDELLIVTFTNASAAEMKFRIGKGLEEALAQNPDSTHLKRQVA
                     LLNYASISTLHSFCLEIIRKYYFDADIDPNFRLIEPIESSMIRDEVLENLLEQEYSIE
                     NNEPFFHLVESFTGDRSDAELHALISKLYDFSRANPDPNIWLEEMVDFYNTEETTSIT
                     ELPYFPI"
     gene            complement(677..4150)
                     /gene="addB"
                     /locus_tag="U0308_002717"
     CDS             complement(677..4150)
                     /gene="addB"
                     /locus_tag="U0308_002717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddB"
                     /protein_id="HEM2317671.1"
                     /translation="MTLQIIAGRSGTGKTTYLMDEVSVKIKQNSKTYIFIVPDQMTFQ
                     METSFLNKENLEGMLGTQIFSFSRLAWKILQETGGLSKTFLSQTGIEMVIRKAALDQR
                     DKLKIFSRATSRKGFYAELANLFKEMKQEEVSIEDMVKSATNLSTSVNNKIHDISIIY
                     QKYEELLADKFLENEDYLRLLAEKITESDYLNQTEIVIDGFTSFSQQELTVIGALMRK
                     CDKVTVSLALNVPEIKHGLDEYSMFKASTEAYYALLELAKLNGINVEEDKFFLENKRA
                     KTESLAFLANAWGHNKFMAFKEEPHNLSVHQANNRRAEIEGVAREIRQLTLNGYRYQD
                     MAILTRNLGDYDVLCETVMESYNIPIFIDKKRAMSKHPFIEFIRSSLDAILFNWKYEP
                     IFQAVKTEFFFGVAEKSSVLRRKADILENYVLENGIQNKWKWEKEGDWIYRKIRGLST
                     NVLPQTDEEIQTQSIINEMRSLIVNPLSTLELNLKKAKTGMEFALALYHFLEQVNAVE
                     RLESWRQRAEEQGYLELAREHEQAWSAISALLDEFVEVLGEETLDLNSFVEIIATGLD
                     ALEFSLLPPSLDQVVLSDMENAKLLDMKVIFAIGMNDGVMPLRQKDNGILSDQDRDAL
                     RAEVSNLKPSAKNNIGEEDLLAYKIISLPSDKLFLSYPAADEEGKVLSESNYLRKIKG
                     QFKKLSESVYLTDPGLLSDAEQSSYIRSKQATLGLLTSQLQMYKRGYPLSSVWWDAYN
                     SYFENGKESRMAKQVLSSLYYENKTKPLQEKTAKNLFGETIHASVSRMEKFFSCEFQH
                     FAQYGLKLEERGHFQLQAVDMGEIFHGAMEWISAELKRNNLDWGSLTDQECRQMAKLA
                     MTFLAPKIQHEILLSSKRMEYIQYKLLQIITRATTVLNEQAKSSAFRPVGLEVDFGLK
                     GDIPPLKISLQANSELLLQGRIDRIDMAEQEDRTFLRIIDYKSSSHDLALTEVYYGLA
                     LQMLTYLDIVVTNAQKMIGKTAEPAGVLYFHMHNQYVQAEKELSDEAIAKELQKNSKM
                     KGLILSDPVAVSLMDTTLEKGKSSNIVPAEIKQNGELSARSKTATREEFDKMRHFVRH
                     KYQEAGNKILDGAVSINPYKLKERTPCQFCGFRSFCGFDPSLASNQYRHLTNEKTETI
                     LAKMDIEGGGQ"
     gene            complement(4300..4656)
                     /locus_tag="U0308_002718"
     CDS             complement(4300..4656)
                     /locus_tag="U0308_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465793.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IDEAL domain-containing protein"
                     /protein_id="HEM2317672.1"
                     /translation="MVICKSLDFGKVVFSSCFLFFLSILQFFKIVINMSEGVVVVEMR
                     DFSNSLMNQVGVLKGEKELTNVFIECFLTMLLEERKLEQLRAEIDKALDNRNKAEFMK
                     LTEKMNKIQQEMLAFD"
BASE COUNT         1406 a          954 c          676 g         1710 t
ORIGIN      
        1 aattggaaaa taaggtaatt ctgtaatcga agtagtctct tctgtattat aaaagtccac
       61 catttcttct aaccatatat tcggatctgg atttgctctt gagaaatcat atagcttaga
      121 tattaacgcg tgaagctcag catccgacct atctccagta aaagactcta ccaagtgaaa
      181 aaacggctca ttgttttcaa tactgtattc ttgttcaagc aaattttcta gaacctcatc
      241 acgaatcata ctactttcga ttggctcaat taagcgaaaa tttggatcaa tatctgcatc
      301 aaaataatat tttctaataa tttctaagca aaaagagtgg agagtggaaa tagaagcata
      361 gttaagtaaa gccacttgcc tttttaaatg ggtagaatct ggattttgag ctagagcttc
      421 ttccaagcct ttcccaattc taaacttcat ttcagcagca gatgcattag taaaagttac
      481 gattagcaac tcgtcaacat ttaagttcgc tgactcattt attaacttct caataattct
      541 ggttactaat acagctgtct tccctgaacc agcagcagca gctacaagca cattgttccc
      601 ttcagcttgg atagctttcc actggtcatc tgtccataaa gaactttctg gttttggcgg
      661 tatatttaat cccatgctac tgtccccccc cttcgatatc catttttgct aaaattgttt
      721 ctgttttttc attggttaaa tgtctatatt gattgcttgc tagagatgga tcaaatccac
      781 aaaatgaacg aaaaccacaa aattggcaag gtgttctttc ttttagttta tatgggttaa
      841 tggaaactgc tccatcaagt attttgttcc cagcttcttg gtatttatga cgtacaaagt
      901 gacgcatttt atcaaattct tctcttgtcg cagtttttga cctcgcactt aattcaccat
      961 tttgttttat ttctgctgga acaatattag atgatttacc tttttcaagt gtcgtatcca
     1021 tcaatgatac agccacagga tcagataaaa ttaatccttt cattttagaa tttttttgta
     1081 attcttttgc gatagcctca tcacttaact ctttctccgc ttgtacatat tgattatgca
     1141 tatggaaata tagtactcca gctggttctg ccgttttgcc aatcattttt tgtgcatttg
     1201 taactacaat atccaaatac gtcagcattt gaagcgctaa gccataataa acttccgtaa
     1261 gagccaaatc atgtgaactc gatttataat ctataatgcg taggaatgtc cgatcttctt
     1321 gttctgccat atcaatccta tcaattcgac cttgtaaaag aagttcacta ttcgcttgga
     1381 gcgaaatttt taatggcgga atgtctcctt ttaagccaaa atcaacttct aagccgactg
     1441 gacgaaatgc actacttttt gcttgttcat ttagtactgt cgttgccctc gttatgattt
     1501 gaagcaattt atactgaata tattccattc ttttggagct aagtagtatc tcatgctgaa
     1561 ttttaggcgc taggaaagtc attgctaatt tcgccatttg tctacattct tggtctgtta
     1621 aactgcccca atccagatta tttcttttta attctgctga aatccattcc attgctccat
     1681 ggaaaatttc acccatatct acagcttgta gctgaaaatg acctcgttct tctaatttta
     1741 aaccatattg agcaaaatgt tgaaattcgc aactgaaaaa tttctccatt ctcgagacac
     1801 tcgcatggat tgtttctcca aataagtttt tggcagtttt ttcttgtagt ggttttgttt
     1861 tattttcgta atacaaacta gataacactt gtttagccat tctagattct tttccatttt
     1921 caaaataact attataggca tcccaccata cactagatag tggataacct cgtttgtaca
     1981 tttgtaattg actcgtcaac aaacctaatg ttgcttgctt agaacgaata taactacttt
     2041 gttccgcatc acttaataaa cctgggtctg ttaaataaac cgattcgctt aattttttaa
     2101 attggccttt tattttcctt aaataattgg attcacttag cactttacct tcttcatccg
     2161 cagcagggta actaagaaat agtttatcac taggcaaact tattatttta tacgccaata
     2221 aatcttcttc tccaatatta tttttagcag atggcttcaa attactaacc tcagcacgca
     2281 aggcatccct atcttgatcc gaaagaatcc cgttatcctt ttggcgaagc ggcataacac
     2341 catcgttcat tccaattgca aaaatcactt tcatatctag taatttcgca ttctccatat
     2401 cagataaaac tacttgatct aaggaaggtg gcaaaagtga aaattcaagg gcatctagcc
     2461 cagtggcaat aatttctaca aaactattta agtctaaagt ttcttcacct aaaacttcta
     2521 caaattcatc caaaagcgcc gaaatagcgc tccatgcttg ctcgtgctca cgtgcaagtt
     2581 ctagataacc ctgctcctct gctctttgtc tccatgattc caatcgttct acagcattta
     2641 cttgttctaa aaaatgataa agagctaaag caaattccat ccctgttttt gctttcttta
     2701 gatttaactc taaagttgaa agtgggttta ctataagact tctcatttcg ttaataattg
     2761 attgcgtttg aatttcttca tctgtttgag gtaacacatt agttgatagc ccacgaatct
     2821 tccgataaat ccaatcgcct tctttttccc atttccattt attttgaatg ccattttcta
     2881 atacatagtt ctctagaata tccgctttac gtctaagaac acttgatttt tcggcaacac
     2941 caaagaaaaa ctctgtctta actgcttgaa agattggttc atacttccaa ttaaacaaaa
     3001 tagcatctaa gctagaacgg ataaactcaa taaatgggtg tttcgacata gctctttttt
     3061 tatcaataaa gatgggaata ttatatgact ccatcactgt ttcacataaa acgtcataat
     3121 ctccgagatt tcttgtcaaa atagccatat cttgatatct gtatccattt aatgtgagtt
     3181 gacgaatttc acgagcaacc ccttctattt cagcacgtct gttgttcgct tgatgaacac
     3241 ttaagttatg aggttcttct ttaaaagcca taaatttatt gtgaccccaa gcatttgcta
     3301 aaaatgctaa tgattctgtt tttgcccgtt tattctctaa gaaaaactta tcttcttcta
     3361 cattaatacc atttaatttt gccagctcta ataaagcata gtaagcctcc gtacttgctt
     3421 taaacatgct gtattcatct aatccatgct tgatttcggg cacatttaaa gctaaagaaa
     3481 ctgttacttt atcacatttt cgcattaatg caccaatgac tgtcagctct tgttgcgaga
     3541 aagaagtaaa gccatcaatg actatttccg tctgatttaa ataatcactt tctgtaattt
     3601 tttccgcaag taatctcaag taatcttcat tttcgaggaa tttatctgcc aataattctt
     3661 catacttttg atagattatt gatatatcgt ggattttatt gttcacactt gtagacaggt
     3721 tagtagcgct tttcaccata tcttctatag aaacttcttc ttgtttcatt tctttaaata
     3781 aattcgctaa ctctgcatag aaaccttttc tagacgtagc tctagaaaag atttttagtt
     3841 tgtctctttg atcgagtgca gcttttctaa taaccatttc gattccagtt tgactcagaa
     3901 aagttttaga taacccaccc gtttcttgaa gtattttcca tgctaaacga ctaaaactaa
     3961 atatttgagt cccgagcatt ccttctaaat tttctttgtt taaaaagctt gtctccattt
     4021 gaaacgtcat ttgatccgga acaataaaga tgtatgtctt agaattttgt ttaattttta
     4081 cgctaacttc gtccattaaa taagttgttt tacctgtgcc tgatctacct gcaattattt
     4141 gaagtgtcat accctcacca ccgaacatat gtttttattt agtttaccat atttgagcaa
     4201 tctgtccaga acttttttcg aagcattttt tgcttgaaaa tttataaaac agctcaaaaa
     4261 aactaagata gctcttacta tcttagtttt tcatatattc tagtcaaaag ctagcatttc
     4321 ctgttgaatt ttattcattt tttctgtaag tttcataaat tccgctttgt tcctattatc
     4381 gagagcttta tcaatttcag ctctaagttg ttctaatttt ctctcttcta ggagcatcgt
     4441 caggaagcat tcgataaaaa cgtttgttaa ttctttttca cccttaagga cacccacctg
     4501 attcatcaac gaattagaaa aatcacgcat ttccacgact accactcctt cactcatatt
     4561 tattacaatt ttgaaaaatt gtaatatact aagaaaaaac agaaaacagc ttgaaaatac
     4621 aactttacca aaatctaatg acttgcaaat taccatgtgc tataatgaca aaaaataact
     4681 cataactaac tttgatgctt agtcgttact tagaagtttt gcttattagg caataactct
     4741 aggttt
//
LOCUS       DASDYK010000156         4734 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.156, whole genome shotgun sequence.
ACCESSION   DASDYK010000156 DASDYK010000000
VERSION     DASDYK010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4734
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.156"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..804)
                     /locus_tag="U0308_002719"
     CDS             complement(<1..804)
                     /locus_tag="U0308_002719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012582046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEM2317673.1"
                     /translation="MKEKEYDLQLSNIKGILIFLVMLGHYLLTMGPKQVIPIDIIYSF
                     HMPAFIFISGIFSQNVTFKKIGRILGLFIIFQPLFILFGVVTGYYKDIDIKMLITPAF
                     HLWYLLALAVWMLFSMYANKRGKYAFDVLMLVLILFVAAVGNRYFYGTQFLTITRILS
                     FFPYFIIGFYLNRNGFDKVRNVLKKYKYICGIAVIILIVILYFFFSKQPNEFLYLFYG
                     FLDRMAFSSTTFGYLVNVFASFILAFTWIALLIAVVPTRRTIFNVIGSNT"
     gene            complement(909..1130)
                     /locus_tag="U0308_002720"
     CDS             complement(909..1130)
                     /locus_tag="U0308_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317674.1"
                     /translation="MKQYVVVDYDDNNRVVIIDSDRSKCLSAIEMILGNDIAIGVYED
                     PDLDLEEIMKDEAWDNFGFAIFEHERTAI"
     gene            complement(1363..1740)
                     /locus_tag="U0308_002721"
     CDS             complement(1363..1740)
                     /locus_tag="U0308_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317675.1"
                     /translation="MKVNLVEDQFNNLDGATLQVMYDKQQNLNLLMLTPEKNGDSVSI
                     WVDEKLSYKLFEALNTEKLSDLDEILFNTLKVVLQKYEYNFIATIAAAKENIEFMCAW
                     MQSKNQSAIIRKLAIWAEVEEQG"
     gene            complement(1757..2479)
                     /locus_tag="U0308_002722"
     CDS             complement(1757..2479)
                     /locus_tag="U0308_002722"
                     /inference="COORDINATES: protein motif:HMM:NF022432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2786 domain-containing protein"
                     /protein_id="HEM2317676.1"
                     /translation="MDNEKIIRKVKRLLALAKENKSDEEGQSAFMLAQRLMLENDIDA
                     AEIGDNEDVSDFITENNVTIYKRLFWWEKRLARIIADNFRVKMFYDMKEDSGEITKSA
                     ITFYGLDKDLVLAKEMYLLAYEALLFHSKFYVNSYYENSEEKRSRYLTESLKSSYIRG
                     FLKGIERKFEEQISVLRNEFEILVLTPQIVIDAYKIRSEGFTKHKFKIPAVKEDGAYD
                     NGYKKGNSIDFTKSMISENVES"
     gene            complement(2507..2884)
                     /locus_tag="U0308_002723"
     CDS             complement(2507..2884)
                     /locus_tag="U0308_002723"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317677.1"
                     /translation="MEDMKKYEIKTIENGWTRLENYRDGYVVAIKSFQGICVNITNFS
                     SSSLHNYSIGDLENDPGDWSYIFDEQLLERVNGEDELKTVLEKYHLTEAEITEVLCYD
                     FDNRYSESYELQAKRIQAYMRNE"
     gene            complement(2885..3616)
                     /locus_tag="U0308_002724"
     CDS             complement(2885..3616)
                     /locus_tag="U0308_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HEM2317678.1"
                     /translation="MKKKRVLTSILTLIILVLVTVSGYVVKNWEIYFPTVSFDEGTNI
                     ISEKIPTLAKVKYKGNQVISINNQIPIFTEGDLSLKNGSWQKFSDLDSLNRVGEANAM
                     LHNSMMPQDERESLYINPTGWKNKKTRTGWLYNRAHLVGFQLTGENNNPKNLMTATRS
                     LNTPYMLEYENRVANYLHETNNHVRYRVTPIFKDNELVARGVEMQAQSIEDDKLQFHV
                     YIFNIEEGMEINYADGTSKVERTDE"
     gene            complement(3613..3885)
                     /locus_tag="U0308_002725"
     CDS             complement(3613..3885)
                     /locus_tag="U0308_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317679.1"
                     /translation="MIEYKDLPDYAYGYAKKNKKTVIIMKDTGEIIPCKAEDIPPMKL
                     NKEIGISPGVMTIMMLGHCKGFKYVKENMEELSLMAQAIDEKELKT"
     gene            4224..4487
                     /locus_tag="U0308_002726"
     CDS             4224..4487
                     /locus_tag="U0308_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317680.1"
                     /translation="MSLKEIIESNEPTEIKEKQIDAYYQAELITRNEASELLNVTTKS
                     LDRYIKQNKVPTFINKSRNILLKKTEVEKMKPEVEKVKEIFHK"
     gene            complement(4534..>4734)
                     /locus_tag="U0308_002727"
     CDS             complement(4534..>4734)
                     /locus_tag="U0308_002727"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317681.1"
                     /translation="FNDHDRKYTLVIQEYKSPLEFLADTENLSEDYLTNVSSEQALKA
                     KEKYIQDETEFFIRQEALSFDY"
BASE COUNT         1483 a          930 c          567 g         1754 t
ORIGIN      
        1 cgtattgctt ccaattacat tgaatatagt tcttctagtc ggaactacag caatcagcaa
       61 cgcaatccaa gtgaacgcta agataaatga tgcgaaaaca ttcactaaat aaccaaaagt
      121 ggtgctacta aatgccattc tatctaaaaa tccataaaat aaataaagaa actcattagg
      181 ttgcttactg aaaaagaaat atagtattac aattagtata atgacagcaa taccacatat
      241 gtacttatat ttttttaaaa catttctgac tttatcaaat ccatttcggt tcaagtagaa
      301 gcctataatg aaataaggaa aaaaactcag aattctagtt attgtcaaga attgtgtgcc
      361 ataaaaatat ctattgccaa cagcagcgac aaataaaatt aatacgagca ttaatacgtc
      421 gaaagcatac ttgcctcttt tatttgcata catggaaaat aacatccata ccgccagtgc
      481 taataaatac cacaagtgaa aagctggagt tattagcatt tttatgtcga tatccttgta
      541 ataccccgtt acaacaccaa ataatataaa taatggctga aaaattataa ataggcctaa
      601 tattcttcct atcttcttga atgttacatt ttggctaaat attccgctta taaaaataaa
      661 tgctggcata tgaaacgaat aaataatatc aattggtatt acttgttttg gacccatcgt
      721 taataaataa tggcctagca ttactaagaa tataagaata ccttttatgt tagacagttg
      781 aagatcatac tctttttctt tcaattaatc acctcgttaa gtttatatta aaactatgta
      841 ggaaatcatc gttcttgtca acatgaaata ttatcgtcat accccccttc tatataaatt
      901 acctgcgatt aaatggctgt cctctcgtgt tcaaagatag caaacccaaa attgtcccag
      961 gcttcatctt tcataatttc ctctaagtct aaatctggat cttcataaac tccaatcgca
     1021 atatcattcc ctaaaatcat ttctattgca cttaaacact tacttctatc cgagtcaata
     1081 atcaccactc tattgttatc gtcataatcg actactacat attgtttcaa agtacccgta
     1141 tttttctcaa ctgctttagt aatactaaaa ttgttagcac taggtaaata aatcatctta
     1201 aatgtcattt tcaatagatc cccttctaaa ctattaggaa aatcatatgt cccgtcagtt
     1261 tgaccataaa aatgtctaaa tcttagtttt aattcttgct cataccattc cttacttttt
     1321 tctggtgttg tcattgttta tcctctcttt cgttcctatt tttcagcctt gttcttccac
     1381 ttccgcccat attgctaatt ttcgaatgat tgccgattga ttcttacttt gcatccaagc
     1441 gcacataaat tctatatttt ctttcgctgc tgctatcgtt gcaataaaat tatattcata
     1501 tttttgtaaa actactttta atgtattgaa aagaatttca tctaaatcac tcaatttttc
     1561 agtatttaac gcttcaaaaa gtttatagct taatttttca tccacccata tacttacaga
     1621 gtcaccgttc ttttccggcg tcaacattaa caagtttaaa ttttgctgtt tatcatacat
     1681 aacttgtagc gttgcgccat ctaagttatt aaattgatct tctactaaat ttactttcac
     1741 gtttgttcct cctttgtcat gattctacgt tttcgcttat catactctta gtaaagtcta
     1801 ttgaattacc ctttttgtag ccattatcat acgctccatc ttcctttact gctggtattt
     1861 taaacttatg cttagtaaaa ccctctgagc gtattttgta ggcatcaatc actatttgtg
     1921 gcgttaaaac cagaatttca aattcatttc ttaatactga aatttgttcc tcaaattttc
     1981 gttctatacc tttgagaaac cctctaatat aacttgactt taggctttct gttaagtacc
     2041 tacttctttt ttcttcagag ttttcataat aactattaac ataaaattta ctatgaaata
     2101 ataatgcttc atatgctagt aaatacatct cttttgctaa tactaaatcc ttatcaagtc
     2161 cataaaacgt aatagcactt ttagtgattt ctccagaatc ttctttcata tcataaaaca
     2221 tcttcactct aaaattatca gcaattattc tagcaagcct tttttcccac cagaataatc
     2281 ttttataaat agttacatta ttttctgtta taaaatcact aacatcttca ttatctccaa
     2341 tttcagcagc atcaatatca ttttccagca ttaatctttg cgctagcata aaagctgatt
     2401 gaccttcttc atcgctttta ttttcctttg ctaacgctaa tagacgttta accttcctga
     2461 taattttttc attgtccatt gcattccctc aattcttttt gatttattat tcgtttctca
     2521 tgtatgcttg aattcgtttc gcctgtagct catatgactc actgtatcta ttatcaaaat
     2581 catagcaaag tacttcagta atttcagctt ctgttagatg atatttctct aaaactgttt
     2641 ttaattcatc ttctccattt actcgctcca gcaattgctc atcaaagata taactccaat
     2701 ctcctgggtc attttctaaa tcacctatac tataattgtg taacgatgaa ctagaaaagt
     2761 ttgtgatatt cacgcatatt ccctgaaatg acttaattgc aacaacatat ccatcacggt
     2821 agttctctaa acgtgtccat ccgttttcaa tagtttttat ttcatatttt ttcatgtctt
     2881 ccatttattc atctgtcctt tctacttttg aagtcccatc tgcataatta atttccatgc
     2941 cttcttctat gttaaatatg tagacgtgaa actgtaattt gtcatcttct atcgactgtg
     3001 cttgcatttc cacacctcgc gctaccagct cattatcttt aaaaataggt gtaactcgat
     3061 atcgcacatg attatttgtt tcatgcaaat aattcgccac tctattttcg tactctagca
     3121 tgtaaggagt atttaaactc cttgttgctg tcattaagtt tttgggatta ttattttctc
     3181 ctgttaattg aaaacctacc aggtgcgccc tattatacaa ccatcctgtt cttgttttct
     3241 tatttttcca acctgtcgga ttaatatata gtgactctct ttcatcttgg ggcatcatgc
     3301 tattgtgcaa cattgcattt gcttccccta cacggttaag tgaatctaag tccgaaaact
     3361 tttgccatga gccgttcttc aatgaaagat caccttcagt aaaaataggt atttgattat
     3421 tgatagaaat aacttgatta cctttatatt ttacttttgc tagtgttggt attttttcac
     3481 tgataatatt tgttccttca tcaaaagata ctgtcggaaa ataaatttcc cagtttttta
     3541 caacataacc acttactgtc actagtacaa gaatgataag tgttaaaata gaagttaata
     3601 ctcgcttctt tttcatgttt tcagctcctt ctcatcaata gcttgagcca ttaaacttaa
     3661 ctcttccata ttttccttta cgtacttaaa tcctttacaa tgacccaaca tcataatagt
     3721 catgactcca ggactaatac ctatttcttt atttaacttc attgggggta tgtcttctgc
     3781 cttacaggga attatttccc ccgtatcttt cataataatg actgtttttt tattcttttt
     3841 agcataacca taggcataat ctggcaaatc tttatattca atcatttctc taactccttt
     3901 ctaagatgta ctactcagac cacttttgtg gtataattac gatataactt ttttgtaaga
     3961 gtaccttttt gaagtggctg cttctcgggt actctttttt tcgcatctat ccatatcctc
     4021 attccggcga aacatagtat tatcagcata aataatgcta ccatcacttc taaaccatac
     4081 attttaccac ctcatttcta tacatttatt ataccctaat atgtccactt agtcaacata
     4141 ttagggtatt taatagacat aactgtcctt ttagtttaca caataaaatc cttgtgctaa
     4201 aatcaaatag aggtgacaac aatatgagtt taaaagaaat aattgaatct aatgagccaa
     4261 ctgaaattaa ggaaaaacaa atagatgcct actatcaagc agagcttatc actagaaatg
     4321 aagctagtga actacttaac gttactacca aatctttaga tagatatata aagcaaaata
     4381 aagtacccac attcataaat aaaagtcgaa atatcttatt aaaaaaaact gaagttgaaa
     4441 aaatgaaacc cgaagtagaa aaagtaaaag aaatcttcca taagtaaaag cacttactca
     4501 agtattattg actaagtgct tttttctggt aatctagtaa tcaaaactta gcgcttcttg
     4561 acgaataaaa aattccgttt catcttggat atatttttct ttcgctttta aagcttgttc
     4621 agaagatacg ttcgttaaat aatcctcgct taaattttct gtgtctgcca gaaactctaa
     4681 aggagattta tattcttgaa taactagtgt atattttcga tcatgatcat taaa
//
LOCUS       DASDYK010000157         4715 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.157, whole genome shotgun sequence.
ACCESSION   DASDYK010000157 DASDYK010000000
VERSION     DASDYK010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4715
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.157"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            378..686
                     /gene="spoVG"
                     /locus_tag="U0308_002728"
     CDS             378..686
                     /gene="spoVG"
                     /locus_tag="U0308_002728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation regulator SpoVG"
                     /protein_id="HEM2317682.1"
                     /translation="MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLF
                     VAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESIVEEN
                     "
     gene            805..1113
                     /gene="spoVG"
                     /locus_tag="U0308_002729"
     CDS             805..1113
                     /gene="spoVG"
                     /locus_tag="U0308_002729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation regulator SpoVG"
                     /protein_id="HEM2317683.1"
                     /translation="MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLF
                     VAMPSKRGVDGEFRDIAHPINSDTRAKIQEVVLAEYERVGEEEATAVTEEESESVSAE
                     "
     gene            1500..2873
                     /gene="glmU"
                     /locus_tag="U0308_002730"
     CDS             1500..2873
                     /gene="glmU"
                     /locus_tag="U0308_002730"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEM2317684.1"
                     /translation="MSKRYAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQISTL
                     NVDKVVTIVGHGAEKVQEHLAGKSEFVKQEEQLGTAHAVLQAKAELAGKDGVTLVVCG
                     DTPLIEASTMEALLKYHHEKRAKATILTTVIEDPTGYGRIIRDDLGIVEKIVEHKDAT
                     EKEQRISEINTGTYCFDNKALFEALENVSNDNVQGEYYLPDVIKILKDSDEVVAAYRM
                     ESFEESLGVNDRIALAEASRLMQRRINENHMRNGVTLVNPENTYIDIDVKIGQDTVIE
                     PGVMLHGETVIGDDCVVTSGSEIVNSVIGERVHVRTSSIFESKVGDDVQIGPYAHLRP
                     ESDIHDHVKIGNYVETKKAVVGEGTKLPHFIYMGDAEIGKNVNVGCGSIAVNYDGKNK
                     AKTIIGDNVFVGCNSNLIAPVKVGDRAFIAAGSTITKDVPDDALGIARAKQDNKLGYA
                     KHLNHGK"
     gene            2924..3880
                     /locus_tag="U0308_002731"
     CDS             2924..3880
                     /locus_tag="U0308_002731"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HEM2317685.1"
                     /translation="MSNEYFDPKLKIFSLNSNRELAEEIAKEVGIELGKSSVTHFSDG
                     EIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYAR
                     QDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDY
                     FSERHLGDDLVVVSPDHGGVTRARKMADRLKAPIAIIDKRRPRPNVAEVMNIVGNVEG
                     KVCIIIDDIIDTAGTITLAAKALREAGATKVYACCSHPVLSGPAMKRIEESPIEKLVV
                     TNSIALPEEKWIDKMEQLSVAALLGEAIVRVHENASVSSLFE"
     gene            complement(3924..4637)
                     /gene="prfA"
                     /locus_tag="U0308_002732"
     CDS             complement(3924..4637)
                     /gene="prfA"
                     /locus_tag="U0308_002732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="listeriolysin O transcriptional regulator PrfA"
                     /protein_id="HEM2317686.1"
                     /translation="MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDG
                     ITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINEL
                     KELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPD
                     GIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYA
                     PKLDEWFYLACPATWGKLN"
BASE COUNT         1533 a          742 c          992 g         1448 t
ORIGIN      
        1 tgataaatca aataccgttt tactggtgtt attgtctgca aaatagtatg atgattacag
       61 attgatactg taatggcaat ggttttgaag tttttatacg tatgatgata attattgtat
      121 acaaaacaaa aactagtagg aacaatctgt aaaagtcaac gattttcaaa aaaaaaaact
      181 tttttttaga ttacaattca caaagttgtc aaatttagtt ttttttatta ttatgttcat
      241 agggaagaat tttacgtgaa tattgcttgc tttataaaag taattttttc tatgggggaa
      301 tttttctcga gtgtgtactt aagttgcatg tgagcattgt ttactagcag cgcaactaga
      361 ttaaggtggt gaagataatg gagattacag atgtgagatt acgacgtgtt gagacagatg
      421 ggagaatgaa agctatttct tcaataacga ttgacggtga gtttgttatt cacgacattc
      481 gtgtcatcga tggcaacgag ggtttgttcg tagctatgcc tagtaaacgt acgccggatg
      541 gtgagtttag agatatcgct catccaatta actcaggcac ccgtgcaaaa attcaagaag
      601 ccgttttagc tgcttatgaa gtagcggacg aaccagcagt aaacgaagaa agttctgcag
      661 acgaaagtat tgtagaagaa aactaaaaaa tcctcggtta gggagaacgt tgttgggaac
      721 agttggggga taaataccta agattttagc tgggataagc agattctttt tgaaagaggc
      781 aaatgggata aggagtgact aataatgcaa gtaacagatg tgagattacg tcgtgtagaa
      841 actgatggaa gaatgagagc gattgcttca atcactttag atgaggaatt tgtagttcat
      901 gatattcgcg ttattgatgg gaataacggt ttattcgtag ctatgccaag taaacgtggt
      961 gttgacggtg aattccgtga tatcgctcac ccaatcaatt ctgacactcg tgcaaaaatt
     1021 caagaagtag ttttagctga atatgagcgc gttggtgaag aagaagcaac tgcagtaaca
     1081 gaagaagaat ctgaatccgt ttctgctgaa taatttaaaa ttttcaaggg ctagctgcgt
     1141 gctagccctt tttgtgtaca tgaagcatga aaaaaatcat aaatagcctt ggtcttctat
     1201 ttttgctatg gtataattaa tagcagatta taaaacaggg aggagaattt taaatgatgt
     1261 tgcaaaaaca ggtccatttt agaaaacttt tttgtggcat aagtgtaaat tcttctttta
     1321 gtaagcaaat aaataatcat actatatctt tcggaatttt cgaacaaata aaactttaaa
     1381 ttgaatcttt acctaaaaaa agtaggtaag gttttttatt tgggcgcatt cttgaaaaaa
     1441 tgtaaatttt acgttatcat tcatagtgga tgaatagtga atattggagg ttctatataa
     1501 tgtcaaaacg atatgctgta gtgcttgctg ctggccaagg cacacggatg aaatcaaaac
     1561 tttacaaagt attgcatcct gtttgtggaa aaccaatggt cgaacatgta gtagatcaaa
     1621 tttcgacgct taatgttgat aaagtggtta caattgtagg tcacggagct gagaaagtac
     1681 aagagcattt agctggtaaa agcgagtttg taaagcaaga agagcaactc ggaacggcgc
     1741 atgcagtact gcaagcgaaa gcggaacttg caggtaaaga tggtgtgacg ctcgttgttt
     1801 gtggggacac gcctttaatc gaagctagta cgatggaagc tttactgaaa tatcaccatg
     1861 aaaaacgtgc aaaagcaact attcttacaa cggttattga agatcctaca ggttatggtc
     1921 gtattattcg tgatgaccta ggcattgtag aaaaaatcgt agaacataaa gatgcaacag
     1981 aaaaagaaca acggatttcg gaaattaaca ctgggacata ttgctttgat aataaagctc
     2041 tttttgaagc gttagagaat gtttctaacg ataatgtgca aggagaatat tacttaccag
     2101 atgttattaa gattttaaaa gattcggatg aagtcgttgc ggcttacaga atggagtctt
     2161 ttgaagagtc acttggagtg aacgaccgaa ttgccctagc tgaagcatcc agattaatgc
     2221 aacgtcgaat taacgaaaat catatgcgta atggagtaac gcttgttaat cctgaaaaca
     2281 cgtatattga tatagatgta aaaattggtc aagatacagt aattgaacca ggagttatgc
     2341 ttcatgggga aactgtaatc ggtgatgatt gcgtggttac aagcggctcg gaaatcgtaa
     2401 acagtgttat cggtgaacga gtacacgtca gaacttcttc tattttcgaa agtaaagttg
     2461 gcgatgacgt tcaaattggc ccatatgcgc acctaagacc agaatctgac attcacgatc
     2521 atgtgaaaat cgggaactac gtcgaaacga aaaaagcagt ggttggtgaa ggaactaaat
     2581 taccacattt catttacatg ggagatgcgg aaattggtaa aaacgtcaat gttggttgcg
     2641 gaagtattgc tgttaattac gacggcaaaa acaaagcgaa aaccatcatt ggggataatg
     2701 tctttgttgg ctgtaattca aacctgattg cacctgtcaa agtgggagat cgagctttca
     2761 tagctgctgg ttccacgatt acaaaagatg ttcctgacga cgcgctaggc attgctcgtg
     2821 cgaaacaaga caataaactt ggttatgcga aacatttgaa tcacggtaaa taatttccat
     2881 ttgggaattt taaaatttta ataaaaaata gtggaggctg attatgtcaa acgagtattt
     2941 tgatccaaag ttgaagattt tctcgctaaa ttctaatcgt gaactagctg aagagattgc
     3001 gaaagaagtt ggtattgagt tagggaaatc aagcgttact cattttagtg atggagaaat
     3061 ccaaattaac attgaagaaa gtatccgtgg ttgtcatgta tatgttattc aatcaacgag
     3121 taatcctgta aaccagaatt taatggaact tttgatcatg attgatgcgt tgaaacgcgc
     3181 ttccgcagca acaattaata ttgttatgcc ttactatggt tacgcacgtc aagaccgtaa
     3241 agcaagaagt cgtgaaccaa tcacagcgaa attagtagca aacttaatcg aaactgctgg
     3301 tgcaactaga atgattacac ttgatatgca tgcaccgcaa attcaaggtt tctttgatat
     3361 tccaatcgat cacttgaatg cagttcgcct tctaagtgac tatttcagtg aacgtcattt
     3421 aggtgatgat ctagtagtag tttcccctga ccatggtgga gttactcgag ctcgtaaaat
     3481 ggctgaccgt ttgaaagcgc cgattgctat tattgataag cgtcgtccgc gtccaaacgt
     3541 agctgaagta atgaacatcg ttggtaatgt agaagggaaa gtttgtatca ttattgatga
     3601 tattattgat acagctggaa caatcacact tgctgctaaa gcattgcgtg aagcaggcgc
     3661 aacaaaagtt tacgcatgtt gttcgcaccc agttctttca ggtcctgcta tgaaacgtat
     3721 tgaagaatcg ccaatcgaaa aattagttgt tacaaactcc atcgctcttc cagaagaaaa
     3781 atggattgac aaaatggaac aattatctgt tgcagctctt cttggcgaag caatcgttcg
     3841 cgttcatgaa aatgcttctg taagttcttt attcgaataa aatataaaac aggatgcctc
     3901 attgagacat cctgtttttt gatttaattt aattttcccc aagtagcagg acatgctaaa
     3961 taaaaccatt catctaattt aggagcatat cttttgagat aatcaagatt ttgtacataa
     4021 aagcatgaat ttttatacac gataactttc tcttgcttta atttagaaat aattctgcta
     4081 acagctgagc tatgtgcgat accgcttgaa tagcctaact cctgcattgt taaattatcc
     4141 agtgtaatct tgatgccatc aggagtttct ttaccataca cataggtcag gattaaaagt
     4201 tgaccgcaaa tagagccgag cttcccgtta atcgaaaaat cattaaattt ggctaggctg
     4261 tatgaaactt gtttttgtag ggtttggaaa acatagaaaa agtgcgtaag attcttgctc
     4321 agtagttctt ttagttcgtt tattttgata acgtatgcgg tagcctgttc gctaatgact
     4381 tctaaattat aatagccaac cgatgtttct gtatcgataa agccagacat tataacgaaa
     4441 gcacctttat agtattgtaa attcatgatg gtcccgttct cactaatact tgtaagcttt
     4501 gtaataccat catataggaa aatacaatat tcttgtggat cccattggtt aaaaataagt
     4561 tcttttttat gaaattgttt tggttttatc ccgttagttt ctaaatattt tttgaattct
     4621 tctgcttgag cgttcatgtc tcatccccca atcgtttttt atcgcccttt tttaaaatac
     4681 cctaaaaaca ttaggcagta acaacaattg ttagc
//
LOCUS       DASDYK010000158         4661 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.158, whole genome shotgun sequence.
ACCESSION   DASDYK010000158 DASDYK010000000
VERSION     DASDYK010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4661
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.158"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(208..1704)
                     /gene="lysS"
                     /locus_tag="U0308_002733"
     CDS             complement(208..1704)
                     /gene="lysS"
                     /locus_tag="U0308_002733"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEM2317687.1"
                     /translation="MSNENHEELNDQLIVRREKVDTLREEGIDPFGEKFIRSISPEEI
                     ETKFADKSKEELEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGED
                     AYAVFKLADLGDIIGIKGTIFRTNTGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQR
                     YRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFI
                     THHNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNPEFTMLESYA
                     AYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYNVDLTPNWRRIHMADAVKEYVGVD
                     FWNVTSDEEARELAKKHNVPVTEHMTYGHILNEFFETYVEEKLIQPTFVYGHPVEISP
                     LAKKNKEDDRFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGM
                     DADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKRRD"
     gene            complement(1819..2814)
                     /gene="dusB"
                     /locus_tag="U0308_002734"
     CDS             complement(1819..2814)
                     /gene="dusB"
                     /locus_tag="U0308_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEM2317688.1"
                     /translation="MFKIGNVEIKNQVVVAPMAGISNSAFRLTVKEFGAGLVCCEMIS
                     DKGIAYRNAKTLDMLYIDEKEKPLSLQIFGGEKETLVEAAKFVAENTTADIIDINMGC
                     PVNKIIKCEAGAKWLLDPNKVYDMVAAVVDAVDKPVTVKMRIGWDEEHVFAIENALAA
                     ERAGAAAVAMHGRTRVQMYEGSANWDVLRDVKRELKIPFMANGDVRTPEDAKRILEHT
                     GADGVMIGRAALGNPWMIYRTVKFLETGELLPEPEPREKMQTAMLHLNRLVELKGENI
                     AVREFRQHAAYYLKGARGSTRAKVAANQATKQSEMEAILNEFVLQYEEKALAKQD"
     gene            complement(2890..3369)
                     /gene="folK"
                     /locus_tag="U0308_002735"
     CDS             complement(2890..3369)
                     /gene="folK"
                     /locus_tag="U0308_002735"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEM2317689.1"
                     /translation="MAKAFLSIGTNLGERLENLNDALSGLAASDKIKITNVSSVYETD
                     AVGYEDQAAFLNIAVEIETDFPPVDLLDFCLALELELGRVRLFKWGPRLIDIDVLLYD
                     DVKIDTEKLKIPHPYMKERAFVLIPLIEISPEKSNLVDNPAILEEQGVRKIKNQVNW"
     gene            complement(3362..3736)
                     /gene="folB"
                     /locus_tag="U0308_002736"
     CDS             complement(3362..3736)
                     /gene="folB"
                     /locus_tag="U0308_002736"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEM2317690.1"
                     /translation="MDKIYLNELVFYGYHGVLAEETKLGQTFRVSLILGLSTKKAGIS
                     DSVDDTVSYAEVYETVKEIVEGTPFKLIEALAEKIATEVLTGYPLLEEVTVKLIKPNP
                     PIPGHYDSVAVEIERKRSDLNG"
     gene            complement(3750..4565)
                     /gene="folP"
                     /locus_tag="U0308_002737"
     CDS             complement(3750..4565)
                     /gene="folP"
                     /locus_tag="U0308_002737"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEM2317691.1"
                     /translation="MKKWKRDHLGMVMGILNVTPDSFSDGGKYMQVEEAVARALQMAE
                     DGAAIIDVGGISTRPGFSEVTPEEELNRIIPVIKAVRTKLPDIWISVDTWRAEVAEKA
                     ILAGANMINDQWGAKKEPKIAEVAAKYNVPICLMHNRENTQYDNFLEDVKKDLLESVA
                     IAKAASVPDEHIILDPGFGFVKTPAQNLEVLRRIDEIVALGYEVLLGTSRKSTIGLVL
                     GTTPEDRMEGTGATTVYGFSKGCTITRVHDVLPIARMVRMTDAITGKLDITKL"
BASE COUNT         1253 a         1025 c          807 g         1576 t
ORIGIN      
        1 tagtcaacaa agtcaagatg ttttttcaaa aaaatttaat ttcttgatga gcattttgcg
       61 tttgtttaac tggaacgttt ataaatatat catgttttta tagggattgc aagcatattt
      121 tgagaaaaag tttctctttg gcaaatttgt ttttttctga gaaaaaaaca aaatccagaa
      181 ccgatataat cagctctgga tttttaatta gtcgcggcgt ttcatagttg ggaataatag
      241 gatatcacga atagacgggg catctgttaa tagcattact agacgatcga tacctattcc
      301 aagtccacca gtcggcggta gaccgtattc taaagcttca aggaaatctg catccattcc
      361 gtgcgcttca tcattacctt gctcacgttc tttcatttgc gcttcaaaac gctctctttg
      421 atcaattgga tcgtttaatt ccgagaatgc atttgcatgt tcacgaccaa cgataaataa
      481 ttcaaaacgg tcagtaaaac ggtcatcttc tttgtttttc ttcgctaatg gtgaaatttc
      541 caccggatgt ccgtaaacaa aggttggttg aataagcttt tcttctacgt atgtttcaaa
      601 aaactcatta agaatgtgcc cgtatgtcat gtgctccgtt actggcacat tatgtttttt
      661 agctagttcg cgtgcttctt catcggaagt tacgttccag aaatccactc cgacatattc
      721 ttttacagca tctgccatgt ggatacggcg ccagtttgga gttagatcta cattgtattc
      781 accgtatgtt atttctgttg ttccatttac ttgtttgcat actgtagata ctaaaccttc
      841 taccaaatcc ataacatctt cgtaatcttc gtatgctgca taggattcta acattgtaaa
      901 ttctgggtta tgacgcgtgg aggttccttc attacggaaa acgcggccga tttcgtatac
      961 tttatccatc ccaccaacga ttaggcgttt taagtgtagt tctaaagcaa ttcgtaaata
     1021 taattccata tcaagtgcat tatggtgcgt aataaatggt tttgcagcag caccaccagc
     1081 aattgtatga agcactggag tttctacttc taggaatcct tgattatcca tgtaatcacg
     1141 agtgtatttc aagattttac tgcgcatcac aaaacgattt tggctttctt cgtttgtaat
     1201 taagtctaaa tagcgttgac gatagcgttg ttctacgtct tttaagccat gatatttatc
     1261 aggaagtgga cgtaatgatt tggaaagcaa agtgaattcc gttgctttaa cagaaagttc
     1321 acctgtatta gtacggaaaa tagtcccttt tataccaata atgtcaccta gatccgctaa
     1381 tttgaagact gcataagcat cttcgccaat cgcatcttta cggatataga tttgtaattg
     1441 atggaaacgg tcttgaatat gtgtgaaacc tactttgcct ttcacacgtt tcgtcataat
     1501 acgacctgct acagaaactt caatagcagc ttcttcaagt tcttcttttg atttatcagc
     1561 gaattttgtt tcaatttctt ccgggctgat ggaacggatg aatttttcgc caaaaggatc
     1621 tatgccttct tcgcgtaatg tgtccacttt ttcgcgacgg acgatgagtt ggtcatttag
     1681 ttcttcatga ttctcgttac tcatataggt acactcctat tctattcatt tctacagatg
     1741 tttccattat acgctttttt ggtctggttt ttctagtata aatttaaaaa ttgccccgaa
     1801 atctcgaggc aatcctaatt agtcttgttt cgctaatgct ttttcttcat attgaagaac
     1861 aaattcattt aaaattgctt ccatctctga ttgttttgtc gcttggttag cagccacttt
     1921 cgcgcgagtg cttccgcgag ctccttttag ataataagct gcgtgttgtc taaactcgcg
     1981 aactgcaatg ttttctcctt ttagctcgac taggcgatta aggtgaagca tggcagtttg
     2041 cattttttcg cgtggttctg gttctggaag aagttcgcct gtttctagga atttcaccgt
     2101 gcgataaatc atccatgggt ttccaagtgc agctcgacca atcattactc catctgctcc
     2161 agtatgttct aaaattcgtt tggcatcttc tggtgttctc acgtccccat ttgccatgaa
     2221 cgggattttc agttcgcgtt ttacgtctct aagcacatcc cagttcgcgc taccttcgta
     2281 catttgcaca cgagtacggc cgtgcattgc aacagctgca gctccggcac gttcagcagc
     2341 aagtgcattt tcgatagcaa agacatgttc ttcgtcccaa ccaatacgca tttttactgt
     2401 taccggttta tcaacagcgt ccactacagc agctaccatg tcatacactt tatttggatc
     2461 aagtagccat ttcgctccag cttcacattt gataattttg tttaccggac agcccatatt
     2521 aatatcaata atatctgccg ttgtattttc agctacgaat ttcgcagctt ctacaagcgt
     2581 ttctttctca ccaccaaaaa tttgtaagct caatggtttt tctttttcat caatatatag
     2641 catatcaagc gttttagcat tgcggtatgc gattcctttg tcgctaatca tttcacagca
     2701 aacgagacct gctccgaatt ctttgaccgt taaacggaat gcggaattgg atataccggc
     2761 cattggcgcc acaactactt ggtttttaat ttctacgtta cctattttaa acattaatgg
     2821 taaacccctt cctcttaaat tgcgctagtg atatgttatc ataatcagtt ttttctgcaa
     2881 gtgccaattt taccagttga cttgattttt tattttccga acaccttgtt cttccaaaat
     2941 ggctggatta tctacaagat tgcttttttc tggtgaaatc tctattaatg gaatcagcac
     3001 aaaagcgcgt tctttcatat aaggatgtgg gattttcagc ttttctgtat cgattttaac
     3061 atcatcatat aataaaacat cgatatcaat gagtcgcgga ccccacttaa ataatcgaac
     3121 tcgccccaat tcaagttcga gcgcaaggca aaaatctagt aaatcaactg gcggaaagtc
     3181 cgtttcaatt tctacagcga tatttaaaaa tgccgcttga tcttcgtaac ctactgcgtc
     3241 tgtttcgtat acactagata cgttggtaat tttaatttta tctgaagcag ctaaaccact
     3301 tagtgcgtca tttaaatttt ctaaacgttc gccaaggttt gtaccaattg atagaaacgc
     3361 cttagccatt caaatcactt cttttacgtt caatttccac tgcaacagaa tcataatgtc
     3421 ccggaatcgg aggatttggt ttaataagtt ttacagtcac ttcttctaat agaggataac
     3481 cagttaaaac ttccgttgca attttttcgg caagcgcctc gattaatttg aatggcgttc
     3541 cttccactat ttcttttacc gtttcataaa cttctgcata gctgactgtg tcgtctacgc
     3601 tatccgatat tcctgctttt ttagtagaaa ggccgagaat aagcgatact ctaaacgttt
     3661 gtcctagttt tgtttcttcc gccaaaactc catggtatcc gtaaaacact aattcattta
     3721 aataaatttt atccaactaa agcacctctt tataattttg taatatctaa tttgccagta
     3781 atcgcatctg tcattcgtac catgcgcgca atgggaagta catcgtgtac acgagtaatt
     3841 gtgcaacctt tcgaaaatcc gtaaactgta gttgctccag ttccttccat tctatcctct
     3901 ggagtagttc ctaagacgag accaattgtc gactttctac tcgtaccaag taaaacctcg
     3961 taaccaagcg ccactatctc atcaatgcgt cgtaacactt ctaaattctg cgcaggtgtc
     4021 ttaacaaaac cgaaacccgg atcaagaata atatgttcat ctggcacgga tgccgcttta
     4081 gcaattgcaa cactttctaa taagtctttc ttcacatctt ccagaaaatt atcgtattgc
     4141 gtgttttctc ggttgtgcat caaacaaatt ggcacgttat atttcgcagc tacttccgca
     4201 attttcggtt cttttttggc accccattga tcatttatca tattagctcc tgctaaaata
     4261 gctttttcag ccacttcggc acgccaagta tcaacagaaa tccatatatc cggaagtttt
     4321 gtcctaacag ctttaatgac aggaataatt cgattaagtt cttcctcagg cgttacctct
     4381 gaaaaaccag gccgagtaga tattccacca acgtcaataa ttgctgctcc atcttctgcc
     4441 atttgtaacg ctcgagccac agcttcttcc acttgcatat atttcccgcc atccgaaaaa
     4501 gagtctggcg taacattcag tatccccatg accataccta agtgatccct tttccacttc
     4561 ttcaagccca aacacctctt tccgagattt attatagcag aattcagtga ttttagcgca
     4621 caaaaaaacc gatgcggaaa agggagtaaa ccgcatcggt c
//
LOCUS       DASDYK010000159         4617 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.159, whole genome shotgun sequence.
ACCESSION   DASDYK010000159 DASDYK010000000
VERSION     DASDYK010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4617
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.159"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..615
                     /locus_tag="U0308_002738"
     CDS             <1..615
                     /locus_tag="U0308_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2317692.1"
                     /translation="VLKSKGINSLDKVIITHSDADHMEGLDDLQKNITIKELIFAKGA
                     ENKPIMKEALAAMPKVKQTIILAGAKWQIGENSFECLYPDKAGEGGNDDSIVLKAVLD
                     GKIWLFTGDLEANGEKGISEQPIKADILKVGHHGSKTSSSKEFIQKVKPTFAVISCGL
                     NNRFGHPHAETINTLEKAGVTILRTDVQGEITYTFGKGFEATLK"
     gene            683..1714
                     /gene="holA"
                     /locus_tag="U0308_002739"
     CDS             683..1714
                     /gene="holA"
                     /locus_tag="U0308_002739"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEM2317693.1"
                     /translation="MLPEWKQIRSKKIMPVYLIIGTEDYIINETKQLLIDNILEGEEV
                     EFNYANLDLEEMPIEVVIQEAESMPFFGDKRLVMANNPLFLTTEKSKNKVEHDTAKLE
                     AYLNEPVDYSVLCFVARVEKLDERKKLTKLLKKTATVIEAKRPNENELKKWIEAKLSE
                     NNMQMSQEAITRLVELTSGQLTTAMNELQKLMLYCFDSKEITIQDVESLVVRSLEQNI
                     FLLLDKMIAMDISGALRIYYDLLKQKEEPIKILALISSQFRLLNQLKLLEQQGYSQQQ
                     AATKLKVHPFRVKLASKQAKNFTELQLNQALKRLAEIDLEMKTGFGDKEQKLEWFLFE
                     LQDNRQKRV"
     gene            complement(1800..2054)
                     /locus_tag="U0308_002740"
     CDS             complement(1800..2054)
                     /locus_tag="U0308_002740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEM2317694.1"
                     /translation="MPNIKSAIKRVKTAETRNSRNASQRSAMRTAIKKFDEAAANNAD
                     NAKDLYVEASKKLDSAVSKGLIHKNNAARNKSRLAAKLAK"
     gene            2299..4125
                     /gene="lepA"
                     /locus_tag="U0308_002741"
     CDS             2299..4125
                     /gene="lepA"
                     /locus_tag="U0308_002741"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEM2317695.1"
                     /translation="MNKEEMNARQKKIRNFSIIAHIDHGKSTLADRILEQTGALTHRE
                     MKNQLLDSMDLERERGITIKLNAVQLKYKAKDGETYIFHLIDTPGHVDFTYEVSRSLA
                     ACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVREEIEDVI
                     GLDASDAVLASAKSGIGIEDILEQIVEKVPEPSGDVNKPLKALIFDSVFDAYRGVIAN
                     IRIMDGVVKAGDRIKMMSNGKEFEVTEVGVFSPKATPRDELLVGDVGYLTAAIKNVGD
                     TRVGDTITLANNPAEEALDGYRKLNPMVYCGLYPIDSSKYNDLRDALEKLELNDSALQ
                     FEAETSQALGFGFRCGFLGLLHMEIIQERIEREFNIDLITTAPSVIYHVNLTDGSNIV
                     VDNPAEMPEPGVIESVEEPYVKATVMVPNDYVGAVMELAQNKRGNFITMEYLDDIRVS
                     IVYEIPLSEIVYDFFDQLKSSTKGYASFDYELIGYKASKLVKMDILLNAEKVDALSFI
                     VHRDFAYERGKIIVEKLKELIPRQQFEVPIQAAIATKIVSRSTIKALRKNVLAKCYGG
                     DVSRKRKLLEKQKEGKKRMKQIGSVEVPQEAFMAILKMDESK"
     gene            complement(4171..4608)
                     /locus_tag="U0308_002742"
     CDS             complement(4171..4608)
                     /locus_tag="U0308_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2317696.1"
                     /translation="MTYSIKEVSKIFNLSIYTLRYYDKQGLLPFVSKNQSGYREFTES
                     DLNLIHTICCLKNTGMPLKQIRTYIDYCMEGPVSIEARKQLLLDHRAAVLKSLEDLTE
                     NLKEVDVKIAKYSSPDAVEIITAERNYVSMEKKKHDLIYPYNI"
BASE COUNT         1598 a          755 c          900 g         1364 t
ORIGIN      
        1 gtgttaaaat caaaaggaat taatagctta gataaagtaa ttattacaca tagcgatgct
       61 gaccacatgg aaggacttga tgatttacag aaaaacatta ctattaaaga gcttattttt
      121 gctaaaggag cagaaaacaa acccatcatg aaagaagctc tcgctgcgat gccaaaagtg
      181 aaacagacaa ttattttggc cggtgccaag tggcaaattg gcgaaaacag tttcgaatgc
      241 ttatatcccg ataaagcagg agaaggagga aatgatgact ctattgtatt aaaggcagta
      301 ttagatggta aaatatggct ttttactggt gatttagagg cgaacggaga aaagggcata
      361 tcagaacagc ctatcaaagc agatattttg aaagtagggc atcatggtag caagacctcc
      421 agttccaaag aatttattca aaaagtgaag ccgacttttg cagttatttc atgcgggtta
      481 aacaatcgct ttggtcatcc acacgcagaa actattaata cgctagaaaa ggcaggagta
      541 acaattttac gaacagatgt acaaggggaa ataacttata catttggaaa aggctttgaa
      601 gcgactttga aataaaactt gctatctctt atttcatgtt ttaccataga aagagaaata
      661 agagtgaagc gaggcgaaat gaatgctgcc agaatggaaa cagatacgct ccaaaaaaat
      721 aatgccggtg tatttaatca ttggtacgga agattatatt attaacgaaa cgaagcaact
      781 tttaatagat aacattttgg aaggcgaaga agtagaattt aactacgcta atttagattt
      841 agaagaaatg ccaatagaag tggtcattca agaagcagaa agcatgcctt ttttcggtga
      901 taaacgttta gtaatggcca ataatccgct ttttttaaca actgaaaaaa gtaaaaacaa
      961 agtggagcat gatactgcaa aattagaggc ttatctcaat gaaccagtgg attattccgt
     1021 attatgcttt gtagcgcgcg tagaaaagtt agatgagcgt aaaaagctta ctaagttact
     1081 caagaaaaca gctactgtta tagaggcaaa acgacctaat gagaatgagt tgaaaaaatg
     1141 gattgaagca aaattaagcg agaacaacat gcaaatgtca caagaggcta ttactcgact
     1201 ggtggaatta actagtggtc agctaacaac tgccatgaat gaactgcaaa aattaatgct
     1261 ctattgtttt gattcaaaag aaattaccat tcaggatgta gaatctttag ttgtacgttc
     1321 acttgaacaa aatatctttt tgttacttga taagatgatt gctatggata tcagcggggc
     1381 acttcggatt tattacgact tattaaaaca aaaagaagag cctatcaaga tactggcatt
     1441 aatttctagt caattcaggt tgttaaacca attaaagcta ttagaacaac aaggttattc
     1501 gcaacaacaa gctgcgacta aactaaaagt gcatccattc cgcgttaagt tagcatcaaa
     1561 acaagcgaag aatttcacgg aattacaatt aaatcaagct ttaaaacgat tagctgaaat
     1621 cgacttggaa atgaaaactg gctttggtga taaagaacag aaactcgaat ggttcttatt
     1681 cgaattacaa gataatcggc aaaagagagt ataaaaaata gctttgtcat ttaagacaaa
     1741 gctatttttg caaacaaaaa acaccacaca aggtgtgatg ttttataccg aactcggtat
     1801 tatttagcta atttagcagc taagcgagat ttgttgcgag cagcattgtt tttgtgaatc
     1861 aatcctttgc tcacagcgct atctaatttt ttcgatgctt ctacgtaaag atctttcgcg
     1921 ttgtccgcgt tgtttgcagc tgcttcgtca aattttttga tagcagtacg cattgcagaa
     1981 cgttgagatg cattacggct gttgcgagtt tcagcagttt ttacacgttt aattgcagat
     2041 ttaatatttg gcattccatt cacctccgtc caaactaatg aggtagtatt tatttcatat
     2101 aacatacctt tttaaattat atcagaacaa atgctattat accgaaatca cagccatatt
     2161 gcaataatac tttctatttt attttaaatt tatacgtaat taataaagaa gtcattgaat
     2221 gttaagcgtt ctactgatat aatcaaggat agcttgccat cggatttatg cgatgagttc
     2281 taatcaggag ctggggaaat gaacaaagaa gaaatgaatg caagacaaaa gaaaattaga
     2341 aacttttcga ttatcgcgca catagatcat ggtaaatcta cactcgctga tcggatttta
     2401 gaacaaacgg gtgctttgac gcatcgtgaa atgaaaaatc agctactaga ttcgatggat
     2461 ttagaacgtg aacgcgggat aaccataaaa ttaaatgctg tacaattaaa atataaagca
     2521 aaagatggag aaacatatat cttccatctg attgatacgc ctgggcatgt cgatttcacc
     2581 tatgaagtat caagaagttt agctgcatgt gagggagcaa tccttgttgt agatgctgcg
     2641 caaggaattg aagcacaaac ccttgctaat gtttatttag cactagacaa cgatttagaa
     2701 attttaccag tcattaacaa aatcgattta ccagcggccg atccggaaag agtccgcgaa
     2761 gaaattgaag atgtaattgg tttagatgct tctgacgctg tacttgcttc tgcgaaatct
     2821 ggtattggta ttgaagacat tctagaacaa attgtcgaaa aagttcctga gccatctggt
     2881 gatgtaaata aaccactaaa agcgctcatt tttgactctg tttttgatgc atatcgtggt
     2941 gttattgcta atatccgtat catggatggt gttgtaaaag caggcgaccg aattaaaatg
     3001 atgtccaatg gcaaagaatt cgaagtaacg gaggttggtg tattctcacc aaaggcaaca
     3061 ccacgtgacg aattacttgt tggtgacgtt ggttacttaa cagcagctat aaaaaatgtt
     3121 ggagatacgc gcgtaggtga tacaatcaca cttgcgaata atccagctga agaagcgctg
     3181 gatggttacc gtaaattaaa tccaatggtt tattgtggtc tatatccaat cgactcctct
     3241 aaatataatg atcttcgtga tgctttagaa aaactagaat taaatgactc tgctttgcaa
     3301 tttgaagcgg aaacttctca agcattaggt tttggtttcc gttgtggttt cttaggatta
     3361 ctacatatgg aaattattca agagcgaatc gaacgtgaat ttaacattga tttaattacc
     3421 actgctccaa gtgttatcta tcatgtcaac ttgacagatg gttctaacat tgtggttgat
     3481 aatcctgctg aaatgccaga acctggtgtt attgaaagcg tggaagagcc atatgtaaaa
     3541 gcaactgtga tggttccaaa tgattatgtt ggtgcagtga tggaactggc acaaaacaaa
     3601 cgtggaaact tcattacgat ggagtactta gatgatattc gcgtaagtat tgtgtacgaa
     3661 attccattat ccgaaatcgt atatgacttt tttgaccaat taaaatcatc tacaaaaggt
     3721 tatgcgtcct ttgattatga attaattggc tataaagctt ctaaacttgt gaaaatggat
     3781 attcttttaa atgcagaaaa agttgatgca cttagcttta tcgttcaccg tgattttgct
     3841 tatgagcgtg gaaaaatcat cgtggagaaa ttaaaagaac ttattccaag acaacaattt
     3901 gaagtaccta ttcaagcagc aattgccaca aaaattgttt ctcgttctac tattaaagcg
     3961 ttgcgaaaaa acgtacttgc taaatgttac ggtggggacg tatctcgtaa acgaaaactt
     4021 ttagagaaac aaaaagaagg taaaaaacga atgaaacaaa tcggttcagt tgaagtcccg
     4081 caagaagcat ttatggcaat cttgaaaatg gacgaatcca aataataaaa aagttgtgct
     4141 gtgaacagaa atgttcacag cacaactttt ttatatatta tacggataaa tcaaatcatg
     4201 ctttttcttt tccatactga cataatttct ctcggcagta atgatttcta ccgcatcagg
     4261 agacgaatac ttcgctattt taacatcgac ttcttttaga ttttctgtta aatcttctaa
     4321 actttttaaa acggcggccc gatgatccaa gagcaactgt ttacgcgctt caatagaaac
     4381 ggggccttcc atacaataat caatatatgt gcggatttgc tttagtggca ttcctgtatt
     4441 tttcaagcaa caaatcgtat gaattaaatt taagtctgat tccgtaaact cacggtagcc
     4501 ggattggttt ttagaaacaa acggcaataa accttgctta tcatagtaac gcaatgtata
     4561 aatcgacaaa ttaaatattt tggacacttc tttaatagaa taagtcattt cttcctc
//
LOCUS       DASDYK010000160         4574 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.160, whole genome shotgun sequence.
ACCESSION   DASDYK010000160 DASDYK010000000
VERSION     DASDYK010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4574
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.160"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..370)
                     /locus_tag="U0308_002743"
     CDS             complement(<1..370)
                     /locus_tag="U0308_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HEM2317697.1"
                     /translation="MLKKIFIALIALVVIINTVSFTAVSASTPTWLEQTMNSNEPFIK
                     EIEKETGKTRANITQTDLEAITALRVTGASDIPTNIDMLTHLTTLEVKNGTLSSVSNS
                     VGNLKELKILVLNDNNLSTFP"
     gene            complement(572..1444)
                     /locus_tag="U0308_002744"
     CDS             complement(572..1444)
                     /locus_tag="U0308_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2317698.1"
                     /translation="MISYGELIRQIRQSKKISQKEVYTGVISKSYAIEFEKGTHAISS
                     LLLEKIVAKLMVSMEEFFLMYHQEELPEKEDFWETYARTCKTDEASAWESLYQKISLE
                     KGKVNQVKSAAIKLELDHIKGKQVADKKAVQILENYLIEAVFWTLQDIFLFTRMMHYL
                     PLKSRVPFYYKLLNTLDRYRHFERGRSILQSALASIMDDFIERNEIEHMELMIKSLEK
                     ISEDCDGTYFKILCMYYRGIVRWGEGEEREGGEEIEQAVAILRALGYENKAIEYETMY
                     RQFARENNDIKTME"
     gene            complement(1608..2510)
                     /locus_tag="U0308_002745"
     CDS             complement(1608..2510)
                     /locus_tag="U0308_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE/MutR family transcriptional regulator"
                     /protein_id="HEM2317699.1"
                     /translation="MGSYGELIREIRLSKGLTQKEVYTGIISRSYAIGFEKGKHEITL
                     SLFEEILKRIMVPLDEFFFIYRDFSSTEDDSFWIDFVELSGKNDVVGMQALLDKITLE
                     RTEQTEVRKAILHTRIQTINHYLRTNVFDESNISDEYKKIIHDYLWKMQTWTLEEVRI
                     FSNGISFFEEEVQIHFYQIMLKSYEKYRYYDRGRLLFCHLFANLTDELIIQNKINYAN
                     LVLEKLKEASETSGSFNSAFYRIVANYYQGAIWMKEGEVEKGYRQAKRAIQTWKELHY
                     EAIADLYSVVLKQFLEKENIQVED"
     gene            complement(2778..3242)
                     /locus_tag="U0308_002746"
     CDS             complement(2778..3242)
                     /locus_tag="U0308_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEM2317700.1"
                     /translation="MRKSRWLLILLLLIVLVALLACVDSGNGDVSGVPAKRGKQHFPP
                     TDTKKGWIELLATDGISSQGDLPCVYEEAESVEKLEVHMKELSTVSLTYVYIDGYIVQ
                     MEQGGGELSFQIQLSKAELKRGIHELTAVQYQENNPDTNKVELLKRANYEVK"
     gene            3400..4173
                     /locus_tag="U0308_002747"
     CDS             3400..4173
                     /locus_tag="U0308_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEM2317701.1"
                     /translation="MFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMGVEE
                     PLLPQMRDMKEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPEVP
                     SIHSTAMFPRICVWGKLEDSTDGKQFYIFNTHLDHISEEARLFASQLLLHKASLIQED
                     LPVILLGDFNTEPSTPTYNLITQRYQDAQLLSKTPVKGPLGSFHDFQPLRPESELEKI
                     DYIFVSNEFHICSYETSTDEIDGCSASDHFPVMAVVGWT"
     gene            complement(4208..>4574)
                     /locus_tag="U0308_002748"
     CDS             complement(4208..>4574)
                     /locus_tag="U0308_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEM2317702.1"
                     /translation="AVVTESSYGIERFLGEDETIIQIFKFVRDEVIITSKGIFNVDAQ
                     GITGKKVEYKFFPKKALKYVSIETAGTLDRDFDLKIGVDGNTVVTQNTSFSAPISLKV
                     HKNDTEMGFALYKMIKEML"
BASE COUNT         1381 a          959 c          643 g         1591 t
ORIGIN      
        1 ttggaaaggt gcttaaatta ttatcattca gaactaagat ttttaactcc tttaaattcc
       61 ccactgagtt agatacggaa gataatgttc cattcttaac ttctaacgta gttaaatgag
      121 ttaacatatc gatattagtc ggaatatcac ttgcccctgt tactcgcaag gcagttatag
      181 cttctaaatc tgtctgtgta atattcgctc tcgtcttacc agtttctttt tcaatctctt
      241 ttataaacgg ttcattacta ttcatggttt gttctaacca tgtaggtgtg cttgcagaga
      301 cagccgtaaa actaactgta ttgataataa ctacaagcgc aattaatgca ataaatattt
      361 tctttaaaat aacaatcttc ctccttttaa cgctaaattt gcagtgtcag ttggcaattt
      421 attcctttgc caaagcccct cccttcactg tcaatatggc tttaagccgt acttcagtct
      481 atataatact atgcggagtc ttaaaatttt ctaatgtcgc atatatacta ctcaaaaaaa
      541 gaaaaccaaa aagaatagtc ctttttagct ttcattccat cgtttttata tcgttgtttt
      601 ccctcgcaaa ttgccggtac atggtttcat actctatcgc tttattttca taacctaatg
      661 ctcgcaaaat agctactgcc tgctcgattt cttcgccacc ctcgcgctct tcaccttctc
      721 cccaccgcac aattccacga taatacatac aaagaatttt gaaataagta ccatcacagt
      781 cctcactaat tttttctaag ctttttatca ttagctccat atgctctatt tcatttctct
      841 ctataaaatc atccatgata ctagccagcg ccgattgtaa aatgcttctt cctcgttcaa
      901 aatggcggta tctatccagc gtgtttaaca atttataata gaacggtact cggcttttca
      961 gtggcaaata gtgcatcatc cgcgtaaata aaaagatatc ctgcaatgtc caaaaaaccg
     1021 cttcaatcaa ataattttcc aaaatttgaa ccgctttttt gtccgccact tgtttgcctt
     1081 ttatatgatc taactccagt tttatcgccg cgcttttcac ttgattaact tttccttttt
     1141 ctaatgatat tttttggtaa agggattccc aagcgcttgc ttcatccgtt ttacatgtcc
     1201 gcgcgtaagt ttcccaaaaa tcttccttct ccggcaactc ctcttgatga tacattaaga
     1261 aaaattcctc catactcacc attaacttag cgacaatttt ctcgagtaat aggcttgata
     1321 ttgcatgtgt ccccttttca aattcaattg cataagattt actaataacc cctgtgtaca
     1381 cttctttttg ggagattttt ttagactgtc ttatttgccg aatcagctca ccataactta
     1441 tcatccgaag acctcctctt agctcaattc ttgcctttat tttacattcc tttcttttct
     1501 ctctgtaaat agtgctatat atagtacata aaacatcttt accacaaaca aaaaaacact
     1561 aaaacgactc cattttagtg ttttttaaat agaaattctt cggatagtta atcttctact
     1621 tggatatttt ctttttctaa aaattgtttt aataccacgc tatacaaatc tgctattgct
     1681 tcataatgca gttctttcca tgtttgaatg gctcttttgg cttggcgata gcccttttcc
     1741 acttcgcctt ctttcatcca aatagcccct tgataataat tggctactat tcgataaaaa
     1801 gcactgttaa aactaccact tgtttcagat gcttctttta atttttcgag tactagattc
     1861 gcataattga ttttattctg tatgatgagt tcatctgtca gattagcaaa tagatggcaa
     1921 aatagcagtc ttcctctatc atagtaccta tacttttcat acgatttcaa cataatttga
     1981 taaaagtgaa tttgtacttc ttcctcaaaa aatgatatgc cgttggaaaa aatacgaacc
     2041 tcttctaaag tccacgtctg cattttccaa agatagtcat gaataatttt tttatattca
     2101 tcagaaatat tcgattcatc aaacacattc gtacgcaaat aatgattaat cgtttgaatt
     2161 ctcgtatgaa gtatcgcttt tctaacttct gtctgctccg ttcgctctaa agttatttta
     2221 tctagcaacg cctgcatccc tacaacatca tttttacctg atagctcgac gaaatcaatc
     2281 caaaaactat catcctctgt cgaagaaaag tctctgtaaa taaaaaagaa ttcatctaaa
     2341 ggaaccatga tccgctttaa aatttcttca aacaaactca aagtaatctc gtgttttcct
     2401 ttttcaaatc cgattgcata agacctagat ataattcctg tgtatacctc tttttgagtc
     2461 aaacctttag atagccgtat ttcccgaatc aattcgccat atgaacccat atgatatccc
     2521 cctaattaag ttcttccatt tcaaaaagtc ggaatgcagt atctatgtct atgctttaat
     2581 ttctctactc caaacaattt aggaatcatt gttcttaaaa tatataccct aaacactagt
     2641 attttaattc ttttaaaagc gaaaagctac ttacaatatc gtcatctttc ttttgtaagt
     2701 attaatagca caaaaaaaga atgtcatttt tcacattctc tttaaaaata tggttatgaa
     2761 ttgtttatta gtctttttta tttcacttca taattagcac gttttaaaag ctccactttg
     2821 tttgtatcag gattattttc ttgatattgc acggccgtta attcgtgaat tcctcttttt
     2881 aattctgctt tacttaattg aatttgaaag gaaagttcgc cgccaccttg ttccatttgg
     2941 acgatgtagc catcaatata aacataggtc aaactcaccg tacttaattc tttcatatga
     3001 acttccaatt tttctacaga ttccgcctct tcataaacac aaggcagatc accttgactt
     3061 gaaattccat ccgtggcaag aagttctatc catccttttt tcgtatcagt tggagggaaa
     3121 tgctgttttc cccttttagc cggcacaccg gaaacatctc cattcccgct gtccacgcat
     3181 gctaataatg ccactaatac tatcaatagt aataatatga gcaaccatcg actttttcgc
     3241 aacatagtga cactcccttt ttacaacaat acaatggttt tatttttcca gaaaaaatgt
     3301 agaatatata ctacataaaa cccaaatcag tgaaacgttt tcataaatat gctaaactct
     3361 ctttgtaaaa cattccaatg aaaagaagga tgtggaaaaa tgttcagtgt aactactttt
     3421 aacattcgtt ttgatgatac ctctgagcgg aaaaagagct gggaattgcg taaaacacta
     3481 acaaaatcat tacttgataa atatcaatgg gatttcatgg gagtggagga accccttctg
     3541 ccacaaatgc gcgacatgaa agaaatgcaa gattgggatt attttggtgt aggacgagat
     3601 gatggttttg aaaaaggaga atttactgct gttttttata attctactcg tttcaccttg
     3661 ttgcaagaag ggcatttttg gctttccgaa acgcctgagg ttccttccat tcactcaaca
     3721 gccatgtttc cacgaatttg cgtttgggga aaactagaag attcaacgga tggaaagcaa
     3781 ttttatattt tcaatacaca tttagatcat atctctgaag aagctcggct attcgcaagc
     3841 caacttttac tacataaagc gagcttgatt caagaagatt taccggtaat tttacttgga
     3901 gatttcaata cagagcctag tacaccgacg tacaacttaa taactcaaag atatcaggat
     3961 gcgcagttac tttctaaaac tcctgttaaa ggaccccttg gtagttttca tgattttcaa
     4021 ccactccgac ctgaaagcga gctagaaaaa attgattaca tctttgtgtc taatgagttc
     4081 cacatctgct cttacgaaac tagcacagac gaaatagacg gctgttctgc ttctgatcat
     4141 tttcctgtga tggcagtagt aggatggaca taaaaaaaga gaagacgata ttcgtcttct
     4201 cttctactca taacatttct ttaatcattt tataaagcgc aaagcccatt tccgtatcat
     4261 ttttatgtac ttttaaggaa attggtgcag agaaagatgt attttgtgtc acgactgtat
     4321 tgccgtcaac gccaattttt aagtcaaaat cacggtccaa agttccagct gtctcaatag
     4381 aaacatattt taatgctttc ttcgggaaaa acttatattc tactttcttt ccagttattc
     4441 cttgagcatc cacattaaaa atccctttag aagtaataat aacttcatct cttacaaact
     4501 taaaaatctg aataattgtt tcatcttctc ctaaaaatct ctcaatgcca taagaagatt
     4561 cggtaactac ggca
//
LOCUS       DASDYK010000161         4488 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.161, whole genome shotgun sequence.
ACCESSION   DASDYK010000161 DASDYK010000000
VERSION     DASDYK010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4488
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.161"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..2020
                     /gene="topB"
                     /locus_tag="U0308_002749"
     CDS             <1..2020
                     /gene="topB"
                     /locus_tag="U0308_002749"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR01056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HEM2317703.1"
                     /translation="IVTYGFGHLVELCLPGDYGEEYNKWSLANLPIFPEMKYRVAKDK
                     IEQFSIVKGHLQKATQIIIATDCDREGELIAWLIINQAGIKRNEKKIDRLWINSLEKE
                     AIRKGFKSLKSANETYDKFLEAQTRQKSDWLVGMNLSPLYTLTLQEKGVQGVFPIGRV
                     QTPTLMMVYKRQQAIENFISKKYFEVELRGNQNNNQWTAKLKEKQQFDSKESCKKFLE
                     NGKLKEGNQNVLVANIQKEMKETKSPRLFSLSALQVVMSKKEKVSPKKVLESVQKLYE
                     KKLLTYPRTDSVYITENELEYLLSLKESYQKLFSINQHLDHVDKKTRFVNSKKVQEHH
                     AIIPTKKIPSQTDLKSLTDLERNIYELVTRTTLAMFAETYQYEETTVDLVSNNVAFVA
                     KGKVEKLLGWKSILNDVIEKETEEFTLPSLELDTFIEMDLQVISKDTKPPKSFTEGTL
                     IQAMKTAGKELENEEAQSILKDVEGIGTEATRADVIEKLKSQDYINVVKNQLEVTKKG
                     KQIGKVLESDKLFSSAEMTAVWEKDLKSISEDALTQDVFLKRIKHLVKSYIKQVPQNL
                     ANISKGTEWQEMQKAQSVGVCPNCGKDIVDRGKMYGCVGYKDKPSCSFTLMKKIMGKT
                     LPQKDVSLLLSDGSTRTIKGFVSKKGNKFDAQLKWDKDKITFVFPNKK"
     gene            2072..2272
                     /locus_tag="U0308_002750"
     CDS             2072..2272
                     /locus_tag="U0308_002750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317704.1"
                     /translation="MTLCLLVEVNADFSEAVLFDIEKQENTTVLLSKNDYESLSTITA
                     STDEEIFLEIDMFKKQIVWNNQ"
     gene            2289..3371
                     /locus_tag="U0308_002751"
     CDS             2289..3371
                     /locus_tag="U0308_002751"
                     /inference="COORDINATES: protein motif:HMM:NF037521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317705.1"
                     /translation="MKKATYQLKSREEKELEVQDLMDSMYKKMEGYTTNVDQVKEYLN
                     FMSNFYKYSSRNQQLIQTQYPGAQGVGSFAFFKEKGFSVRKGEKGIKIFVPMRMKMFD
                     RNGAMEYISHATQEEKKKIKSGEIYSVERTHFKLSSVFDITQTNAKVSDYPSLFPNRI
                     QEFKVENNDLREVKQVLENIADGRGIQLNTVDSLGAVKGNFTQYLNTETNEIKKIINL
                     NGKNTPSEEIQVFVHELAHERLHNYERLQNENKNGGSITYSTEVKELQAEMTSYIVCH
                     HIGMDTEDFSLPYIANWTKNGDEIEDKIAVLKEVKNASSDLIEEINNELDRSKNKDLS
                     IENSYSVEKENNQQGYYTPNSAALSR"
     gene            3458..>4488
                     /locus_tag="U0308_002752"
     CDS             3458..>4488
                     /locus_tag="U0308_002752"
                     /inference="COORDINATES: protein motif:HMM:NF024755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HEM2317706.1"
                     /translation="MTEIEKKAFIRKNIKEFKDADEMLTELKARAHGRYFLCTCPSCQ
                     HHEAYMYKDKMNLIFCNRQNECGETTRVILTENDNTSDLQEKYKDKNEKKWLSKAEKE
                     ELKILTANIRYFIDGNASFDMEKGETFRGISRGVYQNHLLVTPDLKFGNRLLNAFPLL
                     MRRYGQSEESIKRFENRDVVIPFFDEKGQVDRLLLRSTSPDVEYSNEYPKEIHCIVQY
                     QKQEVKNFQHNLTKEGVSPILISETLINALSVKEIDHDVEFIAATGVNHVRQMKEYIL
                     ENKEIFQERGVVLAFDPDKAGNLAKEKLKTILSNENIPTRDFPYDNDIQDMNDILQHN
                     DQDLKDLWD"
BASE COUNT         1792 a          557 c          862 g         1277 t
ORIGIN      
        1 aatagtaaca tatggatttg ggcacttagt tgaactctgt ttaccaggag attatggaga
       61 agagtataat aaatggtcat tagctaatct gcctattttt cccgaaatga aatatagagt
      121 agcaaaagat aaaattgaac aattttcaat tgtaaaaggt catcttcaaa aggcgactca
      181 aattattatt gctacagatt gtgatcgtga aggtgaattg attgcatggc ttataattaa
      241 ccaagcaggt attaaaagaa atgagaagaa aatagatcgg ttatggatta attctttaga
      301 aaaagaagcg attaggaaag gttttaaatc attaaaaagt gcaaatgaaa cgtatgataa
      361 attcttggaa gcacagacaa gacaaaaaag tgattggctt gtaggcatga acttatctcc
      421 gttatataca ttgactttac aagaaaaagg tgtacagggt gtttttccaa ttggccgtgt
      481 gcaaactcca acgttaatga tggtttataa acggcaacaa gcgattgaaa attttataag
      541 caaaaaatac tttgaagttg aactaagagg caatcaaaat aataatcaat ggacagcaaa
      601 actaaaagaa aaacaacaat ttgatagtaa ggaaagttgt aaaaaatttt tagagaatgg
      661 aaaattaaaa gaaggtaatc aaaatgtgct agtagctaat attcaaaaag aaatgaaaga
      721 aacgaagagc ccacgcctat tttcgttaag tgcattgcaa gtagttatga gtaagaaaga
      781 aaaagtatca ccaaaaaaag ttttagaatc tgttcaaaaa ttgtacgaaa aaaaattact
      841 cacatatcct cgaacagatt cagtttatat tactgaaaat gaactagaat atttgttatc
      901 actgaaagag tcttaccaaa aacttttttc tattaatcag catttagatc atgttgataa
      961 gaaaacaaga tttgtgaatt ctaaaaaagt tcaggaacat cacgcaatta ttcctactaa
     1021 aaagattcca tcacaaacag atctaaaatc gttgacagat ttagaaagaa acatctatga
     1081 attagtgaca cgaacaactt tagctatgtt tgctgaaaca tatcaatatg aagaaaccac
     1141 tgtagacttg gtaagtaata atgttgcttt tgtagcaaaa ggcaaagtgg aaaaattact
     1201 aggttggaag agtattttaa atgatgtgat agagaaagaa acagaggagt ttacacttcc
     1261 gtctctagag ttagatacgt ttattgaaat ggacttacaa gtgatatcta aggatactaa
     1321 gccaccaaaa tcatttactg aaggcactct aattcaggcg atgaaaacag ctggaaagga
     1381 acttgaaaat gaagaagcac agtcaatttt aaaagatgtt gaaggaattg gaacggaagc
     1441 tactagagcg gatgttattg aaaaattaaa atcacaagat tacattaatg ttgtgaaaaa
     1501 tcaattagaa gttaccaaaa aaggcaaaca gattggaaaa gtacttgaaa gtgataaatt
     1561 gtttagtagt gcagaaatga ctgctgtttg ggaaaaagat ttaaaatcaa ttagtgagga
     1621 cgccctcaca caagatgttt ttttaaagag aattaaacac ttagttaaat catatataaa
     1681 acaagttccg caaaatttgg ccaatattag taagggaact gaatggcaag aaatgcaaaa
     1741 ggcgcaaagt gttggtgtat gcccgaactg cggaaaggat attgttgata gaggaaaaat
     1801 gtatggttgc gttggttaca aagataaacc ttcttgttca tttaccctaa tgaaaaaaat
     1861 aatggggaaa acattaccac aaaaagatgt gtcacttctt ttaagtgatg ggtctacacg
     1921 aactataaaa ggatttgtaa gtaaaaaagg aaacaaattt gatgcacagc taaagtggga
     1981 taaagataaa attacttttg tctttccaaa taagaaatga tcagtaaagc ctcttattat
     2041 aggggctttt ttgttgaaag gaggtgaaat tatgacttta tgtttattag ttgaagtaaa
     2101 tgcagatttt tcagaagctg ttttatttga tatcgagaag caagaaaata caacagtctt
     2161 attgtcaaag aatgactatg aatcattatc aacaattaca gcatcgactg atgaagaaat
     2221 attcttagaa attgatatgt ttaagaagca aattgtatgg aataaccaat gaaaggagca
     2281 aaatttatat gaaaaaggcg acgtatcagc ttaaatcaag agaagagaaa gagctagaag
     2341 tacaagattt aatggatagc atgtacaaaa aaatggaagg ctatacaact aatgtagatc
     2401 aagttaaaga atatttaaac tttatgagta atttctacaa atattcttca cgcaatcaac
     2461 agcttattca aacacagtat cctggagcgc agggtgttgg ttcttttgca ttttttaagg
     2521 aaaaaggttt ttctgttcgt aaaggtgaaa aaggaattaa aatttttgtt ccaatgcgaa
     2581 tgaaaatgtt tgacagaaac ggagcgatgg aatatataag ccatgctacg caagaagaaa
     2641 agaaaaaaat taaaagtgga gagatttatt ctgtagaaag aactcatttt aagctatcgt
     2701 ctgtttttga tattactcag acaaatgcaa aagttagtga ttatccaagt ctttttccaa
     2761 acagaatcca agaattcaag gtcgagaaca acgatttaag agaagtaaag caggttcttg
     2821 agaatattgc agatggaaga ggtatacagc tcaatacagt tgatagtcta ggcgcggtga
     2881 agggtaactt cacacagtat ttaaacacag agacaaacga gattaaaaaa ataattaatc
     2941 tgaatggaaa aaatacgcct tcagaagaaa tacaagtatt tgtgcatgaa ttagcacatg
     3001 aacgtctgca taattatgaa cgattacaga atgaaaataa aaatggtgga agcataacat
     3061 attcaactga agtgaaggaa cttcaagcag agatgacatc ttatattgtt tgtcaccata
     3121 ttggaatgga tacagaggat ttttcattac catatattgc aaattggacg aaaaatggag
     3181 atgaaattga ggataaaatt gcagtattaa aggaagtaaa gaatgcatca tctgatctaa
     3241 ttgaagaaat taataatgag cttgatagat cgaaaaataa agatcttagt attgaaaatt
     3301 cttattctgt tgaaaaagaa aataatcaac aaggctatta tacaccaaac agcgctgcac
     3361 ttagtagata gagaaacgaa tagaagaatt atgatgtaat ggggcttctc ggtgaggagt
     3421 cctatttata ttgatttttg aaaggagtag tgtaaagatg actgaaattg aaaagaaagc
     3481 ttttatacgt aagaatataa aagagtttaa agatgcagat gaaatgctga cagagttaaa
     3541 agctagagct catggaaggt attttttatg tacatgccca tcgtgtcagc atcatgaggc
     3601 gtatatgtac aaagataaaa tgaatttaat tttttgcaat agacaaaacg aatgcggaga
     3661 aacaacaaga gtaatactga cagaaaatga taacactagt gatcttcaag agaaatataa
     3721 agataagaat gaaaaaaaat ggctttctaa agctgagaaa gaagaattaa aaattttaac
     3781 tgcaaatata cgttatttta ttgatggcaa cgcttctttt gatatggaaa aaggagaaac
     3841 tttccggggt attagtcgag gtgtttatca aaatcattta ctggtaactc cagatttaaa
     3901 atttggtaac cgtcttctta atgcgtttcc attgctcatg aggcgttatg gccaatcaga
     3961 agaatctatt aaacgttttg aaaatagaga tgttgttatt ccgttttttg atgaaaaagg
     4021 gcaggtagat cgcttattat tacgatcaac ttctccagac gtagaatata gtaatgaata
     4081 tccaaaagaa attcattgta ttgtgcaata tcaaaagcaa gaagttaaaa attttcaaca
     4141 caatttaact aaagaagggg tatccccaat cctgatatct gaaactctta taaatgctct
     4201 ttctgttaaa gaaattgatc atgatgtaga gtttattgct gctactgggg ttaatcacgt
     4261 gcgacaaatg aaagagtata ttctcgaaaa taaggaaata tttcaggaaa gaggagttgt
     4321 tttagcattt gatcctgata aagctggcaa tttagcaaaa gaaaaattga aaacaatttt
     4381 aagtaatgaa aatataccaa ctcgtgattt tccctatgat aatgatatac aggatatgaa
     4441 tgatattctt caacacaatg atcaagattt aaaagactta tgggataa
//
LOCUS       DASDYK010000162         4401 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.162, whole genome shotgun sequence.
ACCESSION   DASDYK010000162 DASDYK010000000
VERSION     DASDYK010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4401
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.162"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..467
                     /locus_tag="U0308_002753"
     CDS             <1..467
                     /locus_tag="U0308_002753"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317707.1"
                     /translation="FLIINLLLAFSFALTACGNDDVKSKNTTEKEESTRKNNEKDKLE
                     KSKKSSKKTNLKISDASVITQVQFYIEKYDKIDNVKWSWNSDKYNITKMPAVKSTEDG
                     KSFNDVYSAHGTYSWNDKKYNYAITVNFPNENSSQLISLKTDMGTNIEIPTE"
     gene            601..1746
                     /locus_tag="U0308_002754"
     CDS             601..1746
                     /locus_tag="U0308_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM2317708.1"
                     /translation="MDKRIKSYLNSKNEISYMFRVYAGIDNMTGKRKQTTRRGFKTER
                     EAKMELKRIEMQIFEEGGLKTQKKALKFEEVYSTWLELYTQTVKESTLERTKIFFNHH
                     ILPVFSDKFIDKIDIHFCQQVINAWSKSNPTSYKRLKNLTSRVFKYAISLHLIESDPF
                     AFVVVPRGEMIEKEEKDITFYDKYELRSFLDTVKDDTFKYTFFYLLAFTGLRKSEALA
                     LTWNDVDLNNKRLYVNKTLSRGEHARILVNATKTKAGKRDISIDASTVDVLKKWKSYQ
                     RGNHQILRLDKVQIIFDNEGNYYNPSSTYSWLDNIFKHHTELKKITSHGFRHTHASLL
                     FEAGASLKDVQERLGHADIQTTSNIYTHVTQEKKDSTASLFSDFMLK"
     gene            1826..1915
                     /locus_tag="U0308_002755"
     tRNA            1826..1915
                     /locus_tag="U0308_002755"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1862..1864,aa:Ser,seq:cga)
     gene            complement(1984..2577)
                     /locus_tag="U0308_002756"
     CDS             complement(1984..2577)
                     /locus_tag="U0308_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2317709.1"
                     /translation="MKHHHNHHGEAGFKRKVDYLDRPERSEVLSPEDFLQAMPIGKTA
                     SILDLGAGTGFLTIPAAKFVDNTVFALDLDAKMLELIESKAKEAGLANVETLEASMDD
                     IPLEANSVDVVLASLVLHEADSLADVLREVSRVVKTGGYFASLEFDTKGTDLKGPPME
                     IQISAEKLKEELAGFGFEVVKNWQLDEGMYVSIAEKK"
     gene            complement(2590..3006)
                     /locus_tag="U0308_002757"
     CDS             complement(2590..3006)
                     /locus_tag="U0308_002757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM2317710.1"
                     /translation="MKFSKATNYALHTMVYLANLSPEKSVGVKELATKQNVSPTYLSK
                     VLTMLVKAGFIESVTGVNGGYKLAEPASSISFLDVIQAIEGKGAFFHCDPKNHSESQP
                     HCLIGEVMNKAEQQMEDYLSKQTVGSIVVEIEKHQH"
     gene            complement(3111..3815)
                     /locus_tag="U0308_002758"
     CDS             complement(3111..3815)
                     /locus_tag="U0308_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM2317711.1"
                     /translation="MINLIFDIDDTVYDQLKPFENAFKTVFGKADHLKIENLYIKSRF
                     YSDEVYHRVVQGEMPKAAMHVYRITQALNDFDYQITKKEAEAFQHAYEQNQRKIELTS
                     GIKEILTWAKKNEITMGIITNGPKEHQQHKINDLQINDWIPTEHTFISGKVGIEKPDK
                     KIFKLVEEQIGIKGAETYYIGDSFENDVIGSKSAGWKSIWLNRRGHLIPTEAAFQPDY
                     CVENEQQLFAILQEIF"
     gene            complement(3901..>4401)
                     /locus_tag="U0308_002759"
     CDS             complement(3901..>4401)
                     /locus_tag="U0308_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEM2317712.1"
                     /translation="KLIMTNNLYNFDSLVPNIEQLIVTARKNKIEIVYIRHDDGPNTE
                     LTEGKEGFEIYEKFQPTTLERIFDKSVNSAFKGTGLLAYLKEKGTKKIVVAGLQTDFC
                     IDATVKCGFEHGFQMIVPTHANSTEENHFMSGENSYKYYNEWMWPDRYATCISIEETI
                     NEMENN"
BASE COUNT         1410 a          849 c          720 g         1422 t
ORIGIN      
        1 tatttttaat aattaattta ttgcttgcat ttagcttcgc tttgactgct tgtggtaatg
       61 atgatgtaaa atcaaagaat actaccgaaa aagaagaaag tactagaaag aacaatgaaa
      121 aagataaact agaaaaaagc aagaaatcca gtaagaaaac gaatctaaaa atatctgacg
      181 ctagtgttat tactcaagtt caattttata ttgagaaata cgataaaatt gacaatgtta
      241 aatggtcatg gaatagcgac aaatataaca ttactaaaat gccagccgta aagtccacag
      301 aagatggtaa atcatttaat gatgtgtaca gtgcacacgg aacttattcc tggaatgata
      361 aaaaatataa ctatgcgatt actgtcaatt tccccaatga aaatagttca caattaattt
      421 cattgaaaac tgatatgggt acaaatattg aaataccaac agaatgagta aaataaacaa
      481 aaaacgccct ccccgcaaga gataagcgtt ttcaaataca cacataggag tatgcaaatt
      541 cattttacca taatttgctt tacccttcaa aagaacatac attcggtcag gaggataaaa
      601 atggataaac gtattaaatc gtatttgaat tcaaaaaatg aaattagtta tatgtttcga
      661 gtttacgctg gcatagataa catgactgga aaacgaaaac agactacacg tagaggattt
      721 aaaacagaga gagaagctaa aatggagcta aagcgcattg aaatgcagat atttgaagaa
      781 ggtggattaa aaactcaaaa aaaggcgctg aaatttgaag aagtatattc cacgtggcta
      841 gaactttaca cacaaacagt caaagaaagc acgttagaac gcactaaaat attttttaat
      901 catcacatat tgccagtttt tagcgataag tttattgata aaatagacat acacttctgt
      961 cagcaagtca taaatgcatg gtcaaaatct aatccgacgt catataaacg tttgaaaaat
     1021 ttaacttctc gtgtcttcaa atatgctatt tcgttacatt taatagagag tgatcccttt
     1081 gcgtttgttg ttgtacctcg cggagaaatg atagaaaaag aggaaaaaga tattacattc
     1141 tatgacaagt atgaattacg ttcgttttta gatactgtca aagacgacac tttcaaatat
     1201 acttttttct atctgttagc tttcacggga ttgagaaaat cagaagcgct agcgctgaca
     1261 tggaacgatg tagatttaaa caataaacgt ttgtatgtaa acaaaactct ctcacgtggt
     1321 gagcatgctc gcattttagt gaatgctact aaaacaaaag ctggaaagag agacataagt
     1381 atagatgcat ctacagttga cgtgttaaag aaatggaaaa gttatcagcg tggtaatcat
     1441 caaattttaa gattagataa agtacaaatc atatttgaca atgaaggaaa ttattataat
     1501 cccagctcta cttattcgtg gttagataac atttttaaac atcacactga attaaaaaaa
     1561 ataacttctc acggcttccg tcacacacac gcttcacttt tatttgaagc tggtgcttcg
     1621 ctgaaagacg tacaagaacg attaggacat gcagatatac aaactacatc taatatttat
     1681 acacatgtta cgcaagaaaa gaaagattcc acagcttctc ttttttctga ttttatgcta
     1741 aaataaaatc tgttgaaatt gatttgatag tcaaaatgat agtcaaaaaa tcataaatac
     1801 tctcaaatcg ttgatacgac tgcatggaga aatacccaag tccggctgaa ggggacagac
     1861 tcgaaatctg ttaggcggtg tatgccgcgc cggggttcga atccccgttt ctccgtagaa
     1921 ataaaaaggt tcacgcttaa aaatagcttt gattgctatt tttagacgtg aacctttttg
     1981 ctgttacttc ttctccgcaa tactcacata cattccctca tccaactgcc aatttttcac
     2041 cacttcaaac ccaaatcccg caagttcttc cttcaatttc tccgcagaaa tctgaatttc
     2101 cattggtggg cctttcaaat cagtcccttt cgtgtcaaat tccaaactag caaagtagcc
     2161 gccagtcttc acaactctac tcacttcgcg caaaacatct gcgagcgaat ctgcttcatg
     2221 taacacgagc gatgcgagca caacatccac ggaatttgcc tcaagtggaa tatcatccat
     2281 gctggcttct aacgtttcta cattagccaa acctgcttcc ttcgctttcg actcaattaa
     2341 ttccaacatt ttcgcatcta aatctaatgc aaaaactgta ttatcaacga attttgcagc
     2401 tggaattgtt aaaaatcctg ttcccgctcc taaatctaaa atacttgctg tttttccgat
     2461 tggcattgcc tgcaaaaaat cctctggcga cagcacttca ctccgctctg gtcgatccaa
     2521 ataatctact ttccgcttaa aaccagcttc cccgtgatga ttatgatgat gtttcatttt
     2581 agcactcctt taatgttgat gtttttcaat ttctacgaca atactaccta ctgtttgttt
     2641 gcttaaataa tcttccattt gttgctccgc cttattcatc acttcgccaa tcaagcagtg
     2701 cggctggctt tcgctgtggt ttttagggtc acaatggaaa aaggcgccct tcccttcaat
     2761 cgcttgaatg acatcaagaa aactaatact acttgctggt tccgctaact tatacccacc
     2821 attgacgcct gttactgact caataaagcc agctttcact agcatcgtca acactttaga
     2881 tagataagtt ggcgacacat tttgcttggt tgcaagttct ttcacaccga cagacttttc
     2941 tggtgacaaa ttagctaaat aaaccatcgt atgtagtgca taattggttg ctttggaaaa
     3001 tttcatattt tcaccttctt aattaaagac ttaaccactc tataatatct cttataatca
     3061 gaagtgtcaa ttcataacta aaaaaccttt tccaaaaatg gaaaaaggtc ttaaaatatc
     3121 tcctgtaaaa ttgcgaataa ttgttgctca ttttcaacac aataatctgg ctgaaatgct
     3181 gcctctgttg gtatcaaatg tcctcgtcta ttcaaccaaa ttgatttcca accagcactt
     3241 tttgaaccga taacatcatt ttcgaaagaa tcgccaatat aataggtttc ggcaccctta
     3301 ataccgattt gttcttctac tagcttaaat attttcttgt ctggtttttc gataccgact
     3361 ttaccagaaa tgaacgtgtg ctcggttgga atccaatcat tgatttgtaa atcatttatt
     3421 ttatgttgtt gatgttcttt tggtccgttt gtaatgattc ccatcgtgat ttcgttcttt
     3481 ttcgcccatg tgagaatttc tttaatccct gacgtaagtt cgattttgcg ttggttttgt
     3541 tcgtaggcgt gttgaaaggc ttctgcttct tttttagtaa tttgataatc aaaatcattt
     3601 agcgcctgcg taatccggta aacgtgcatt gctgctttcg gcatttcgcc ttggacaacg
     3661 cggtgataca cttcatcact ataaaatcga cttttaatat ataaattttc gattttcagg
     3721 tggtccgctt ttccaaaaac agttttaaat gcgttttcaa atggttttaa ttggtcataa
     3781 actgtgtcat caatatcaaa aattaaatta atcatcattt cctcctgcaa aattcactcc
     3841 ttttactcta ccattaaatc aaaaaagtag gaagagccta agcgtaatgc ttagactctc
     3901 ttagttattt tccatttcat taattgtttc ttctatagat atgcaggtcg cgtaacgatc
     3961 aggccacatc cattcattat aatacttgta actattctcc cccgacataa agtggttttc
     4021 ttccgtcgaa ttggcgtggg tgggaacaat catctggaag ccatgttcaa aaccacattt
     4081 cactgtggcg tcaatgcaaa aatcggtttg caatcctgct actacaattt tcttcgttcc
     4141 tttttctttg agataagcaa gtaagcctgt tcctttaaaa gcgctattaa cgcttttatc
     4201 aaaaattctt tcgagtgtgg ttggttggaa tttttcgtaa atttcgaagc cttcttttcc
     4261 ttctgtaagt tctgtattag gtccgtcgtc atgtcgtata taaactattt ctattttatt
     4321 ttttcgagca gtgacgatta attgttctat attgggtaca agtgaatcga aattgtatag
     4381 attattcgtc ataattaatt t
//
LOCUS       DASDYK010000163         4249 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.163, whole genome shotgun sequence.
ACCESSION   DASDYK010000163 DASDYK010000000
VERSION     DASDYK010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4249
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.163"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            8..697
                     /locus_tag="U0308_002760"
     CDS             8..697
                     /locus_tag="U0308_002760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2317713.1"
                     /translation="MKYIDYHDYMHKDAIIYAYLQNNFPYIRKRIKAWESFTLDREDI
                     LLVKSGAIFEEISGKKKGIARCFFSKSLIFPTRNQIVLKAFETSEICFINAETAFGKL
                     EKDQILSNFFLQIAEKNEEDMRRQAFLGTENSKNKIISTLNFLLENNKSNNKTPIFPE
                     WLQINVLAQLANCSISTISSTVNELHAEGILDIKSSPWKLKGREKRIEILENEHQKIK
                     LNERKHKSNVF"
     gene            774..>4249
                     /locus_tag="U0308_002761"
     CDS             774..>4249
                     /locus_tag="U0308_002761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEM2317714.1"
                     /translation="MKKNILVVMIVSVLAISAIVSAFFLMRDDAYAIETEGFTYSPKG
                     KVVDFSSEAKYNDTWINNEKTITDKKEMKPINLARTLFLKDGRIQFLGKSVAVKSASD
                     LIELPSKTSITESKGSYKAKSDSNKTLAQLPKGTVVKLAEGRYIILDNAYLKNKQGLN
                     KKLPKNVLVSIDENKKVTLMGDKTIEELGGDDAYIEMENNHYHFDLKKEMLVSQTAKE
                     TDIDIRSIKVEIDDNAEKRSLKTAKETANETTKDSTQKEPEKQSNDTSGQKTTQNNET
                     SEGKDNQTQGASGNNANGNANNNTARSNGTGGSDSGANGSQPGGTQNKPNEGDVNKAN
                     EIIKKLNEAENTNTFQVPIVDVNLTVKGQVATAKLKLTDSSKRLNSLEAILYDSKNNI
                     VKKEKLNSTKANQNFTFNNLKYGETYQVVVQGSYKSASNKNQDTIFFRQTVEAKPVVL
                     TPKVTERGEDYMKAELTATELYGQIDKLVLKIKENNSNVTTSQKVTVDASQLTKDGQV
                     EVKFNSLSSAKEYIIEMEELIVDGKNVTDDSWYFISSTLKAKPTIEGINLSYSTDKGE
                     FVASPVNLIDRDESITSIRYVAYLEDDYKANGSNAKEYAYSVVDANQKKTAVKVGRTV
                     DMNDGSYIFVGYISGNNGQSDYTFATPASNSVIVGKKTKPTVEFSLKEAEQDKLTINY
                     EIFDADNTLLFDNLTHPTLKLYKSDAQGMYSGNPVATVDLTKKSDITNLLEFDGLESE
                     AYYVVVMTGSYNLDDGAGIMVDELIGQSSVFRTTEITKVNASFSLDSVDTTKATINVK
                     LSEAAVNLNDANLKIYEKKTNTLVKTIPLHGDFEKLMSDLGNSYPFKDLSINKEYLVK
                     IEDGYDSGMNHVPVEGQFIFKTKKEAPETDKVLLDYKASEMKLGGLAGIAATEKPLID
                     DYNAVSSITYSIYKADDLNTPLVEQEVSTAADFEKHVYFDLTNKLLGRGYSYVIKADV
                     VWNDNYEDHHIEINSDTIQIKKEKPTVEYEILSRTASEIKLNVYVEDEEESIVPGTLE
                     ITSTTGGNEQLQSGKNNVTLPLSSEGTTTIKTTGDYIITSGSSAISDIFMTKQLAALN
                     TTAPQVGAKIAMDASGKSMTIAPEPNAVAKTSVMRTKYDLKDAASSKPDYSITKSGPN
                     QFNTQNLNLPIG"
BASE COUNT         1657 a          670 c          801 g         1121 t
ORIGIN      
        1 aacaagaatg aagtatatcg attaccatga ttatatgcat aaagacgcga taatatatgc
       61 ttatctccaa aataattttc cgtatatccg caaacgaata aaggcgtggg aaagttttac
      121 gctagatcga gaagatattc tattggtgaa aagtggcgca atatttgaag aaattagtgg
      181 gaagaaaaaa ggcatagcac gatgcttttt ttcgaaaagt ttaatttttc ctactagaaa
      241 tcaaatagta ttgaaagctt tcgaaacttc agaaatttgt tttatcaatg ctgaaacagc
      301 ttttgggaaa ttagaaaaag atcagatttt atccaatttt tttctacaga ttgcggagaa
      361 aaacgaagaa gacatgcgaa gacaagcatt tcttgggaca gagaactcaa aaaataaaat
      421 tatttcaacg ctcaacttct tgctagaaaa taataaatct aataataaaa cacccatctt
      481 tcctgaatgg cttcaaataa atgttttggc acagttagcg aattgttcca tctctaccat
      541 ttcttctact gtaaacgaat tacatgcgga aggaatatta gatataaaat cttcgccctg
      601 gaaacttaaa ggcagagaaa agaggataga aattcttgaa aatgagcacc agaaaataaa
      661 gcttaatgaa agaaagcata agagtaatgt tttctaatgg tataagactt gaaaaaactt
      721 tttgagtact tttccaagca caaaaattat actaaaagag gtggaagtag gacttgaaga
      781 aaaatatttt agtcgtaatg attgtttcgg tacttgcaat tagtgcaatt gtatcagctt
      841 ttttcttaat gagagacgat gcttatgcta ttgaaacgga aggctttact tatagcccga
      901 aaggaaaagt agtagatttc tcatcagaag ccaagtataa cgatacatgg attaacaatg
      961 agaaaacaat aacagataaa aaagaaatga agccaattaa cctagcaaga acgttatttt
     1021 taaaagatgg acgaattcaa tttttaggaa aaagtgtagc cgttaaaagc gcatcagatt
     1081 tgattgaatt accatccaaa acttctataa cagaaagcaa aggtagttac aaagcaaaaa
     1141 gtgatagtaa taaaacatta gcacaacttc caaaaggcac agttgtaaaa cttgcagaag
     1201 gaagatatat cattttggat aatgcctacc taaaaaacaa acaaggtctt aataagaaac
     1261 tacctaaaaa cgtacttgtt tccatagacg aaaataaaaa agtgacttta atgggcgata
     1321 aaaccataga agaattaggc ggggatgatg cttatattga aatggagaac aatcactatc
     1381 actttgactt gaaaaaagaa atgttggtca gtcaaacagc taaagaaaca gatattgata
     1441 ttcgctccat taaagtggaa atagatgata atgccgaaaa aagaagtcta aaaacagcta
     1501 aagaaacagc aaatgaaaca acaaaagatt caactcaaaa agaaccagaa aaacagtcga
     1561 atgatacttc tggacaaaaa acaacgcaaa ataatgagac gtctgaaggt aaagataatc
     1621 aaacacaagg cgcgtctggc aacaatgcaa atggaaatgc aaataacaat acagcgagaa
     1681 gtaatggaac aggcggaagt gattctggtg caaacggctc tcagcccggt ggtacgcaga
     1741 ataaaccaaa tgaaggcgat gttaataaag cgaatgaaat tattaaaaag ctaaacgaag
     1801 ctgaaaacac aaatacgttt caagtaccaa ttgtggatgt caatttgaca gttaaaggtc
     1861 aagtggctac agctaaacta aaactgacag actcatccaa aaggctaaac tccttagaag
     1921 caattcttta cgatagtaag aacaatattg taaaaaaaga aaaattgaac tcaacaaaag
     1981 cgaatcaaaa cttcaccttt aacaatttaa aatatggcga aacatatcaa gtagttgttc
     2041 agggaagcta caagtcagca agcaataaaa atcaagatac tattttcttc cgccaaacgg
     2101 ttgaggcaaa accggttgtt ttaactccaa aagtgacgga gcgcggcgaa gattatatga
     2161 aagcggaact gactgcaacc gaactttacg gtcaaattga taagctggtt ttaaaaatca
     2221 aagaaaacaa cagcaatgta accacttctc aaaaagttac tgttgatgcg agtcaattga
     2281 caaaagacgg tcaagtagaa gttaaattta attcattaag tagtgctaaa gaatacatta
     2341 tcgaaatgga agaattgatt gttgatggaa aaaacgtgac agatgatagt tggtacttta
     2401 tttcctctac attaaaagcg aaaccaacaa ttgaaggcat aaatctttca tacagcacgg
     2461 ataaaggcga atttgttgcg tcaccagtta atctaattga cagagacgaa tcaattacaa
     2521 gcattcgata tgtagcgtat ttagaagatg actataaagc aaatggttct aatgccaagg
     2581 aatacgctta ttctgtagta gatgccaacc aaaagaaaac cgctgttaaa gttggtcgaa
     2641 cagttgatat gaatgatggt agttatattt ttgttggtta tatttctggc aataacggtc
     2701 agtctgatta tacttttgca actccagctt cgaacagtgt catcgttggt aaaaaaacga
     2761 agccaactgt agagttttct ctgaaagaag cagagcaaga taaactgaca atcaactatg
     2821 aaatttttga tgcagataac acacttcttt ttgataatct aacacatcca accttaaagc
     2881 tttataagtc agacgctcaa gggatgtata gtggaaatcc tgttgctaca gttgatttaa
     2941 caaagaaaag tgatattacg aatttactag aattcgatgg tttagaaagt gaagcttact
     3001 atgttgtcgt aatgacaggc tcctataatc tggacgacgg agcagggatt atggttgatg
     3061 agcttattgg tcagtcaagt gtcttccgga caaccgaaat tacaaaggtc aacgcatctt
     3121 tttcacttga ttcagttgat acaacaaaag caacaattaa tgtcaaatta tctgaagcgg
     3181 ctgttaattt aaacgacgct aatttaaaaa tttatgaaaa gaaaacaaat acacttgtca
     3241 aaacgattcc gctacacggg gattttgaga agttaatgag cgatttggga aatagttatc
     3301 cctttaaaga tttaagtatt aataaagagt atcttgtgaa aatagaagat ggctatgata
     3361 gtggaatgaa tcatgttcca gttgaagggc aatttatttt caaaaccaag aaagaagcac
     3421 ctgaaacaga caaagtattg cttgattaca aagcttctga aatgaaatta ggaggcctag
     3481 cgggaatcgc ggcaacggaa aagccactga ttgatgatta caacgctgtt agttctatta
     3541 cctatagtat ctataaagca gacgatttaa acacaccgct tgtggagcaa gaagtttcaa
     3601 cagcggcaga ctttgagaag cacgtgtact ttgatttaac taataagctc ttaggacgag
     3661 gttattctta tgtcataaaa gcggatgttg tttggaatga taattatgaa gatcatcata
     3721 ttgaaattaa ttccgataca atccaaatca aaaaagaaaa accaaccgtt gaatacgaaa
     3781 ttttaagccg cacagcgagc gaaattaaat taaatgtata tgtagaagat gaggaagaat
     3841 ctatcgtacc gggaacgctt gaaattacta gtacgacagg cggtaatgag caacttcaaa
     3901 gtgggaaaaa taatgtaacc ttaccacttt caagcgaggg aactacaaca attaaaacaa
     3961 caggtgatta cattattacc agcggaagtt cagctatttc agatattttt atgacgaaac
     4021 agttggcagc attaaatact actgcaccac aagttggagc caaaattgcc atggatgctt
     4081 caggcaaatc aatgactatc gccccagaac ctaatgcagt tgcaaaaact tctgtgatga
     4141 gaactaaata tgatttgaaa gatgctgcaa gctccaaacc agattattca attacaaaat
     4201 ctggtcctaa tcaatttaat actcaaaacc ttaatctgcc tataggtaa
//
LOCUS       DASDYK010000164         4174 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.164, whole genome shotgun sequence.
ACCESSION   DASDYK010000164 DASDYK010000000
VERSION     DASDYK010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4174)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4174)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4174
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.164"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1797
                     /locus_tag="U0308_002762"
     CDS             <1..1797
                     /locus_tag="U0308_002762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEM2317715.1"
                     /translation="YALTWDLENIYAGGSGSEELQQTLQEVKADLDSFVVNVSEWDVP
                     ENVEASAEFLLLVNQNADISKILLTAGSFLECLASADINDSRANELSALIYQYVATLA
                     TAEDEWHDKFAQVSDRVWDELMEQNGLSQISFILSEARTNRRKKGSKEQEAAINSLAV
                     DGYRGWSDHYDTIVGKLRMHVTINGEEKDVSAGQALNLLNHPDRAVRQAVFKEYTRVW
                     QSEARLFSDTLNHLSGFRLATYEIRKWDNILDEPLAINRLDEQTLKSMWNVIQTNKPT
                     FVRFLDRKAKLLGLEKLSFYDVEAPLVFSSEPKKYSYQEGAEFIIEQFNKFSPKMANF
                     AQSAFEKGWIEAEDRDNKRPGGFCTDFPVEKESRIFMTYDGAPGTVATLAHELGHAFH
                     SHVIRDEPFENTDYAMNVAETASTFAEMIIADASVKDAKTKEEKITLLEDKIGRSIAF
                     FMNIHARFIFECNFYEARKQGVVSVDRLNALMEEAQREAYLDALDEYHPQFWASKLHF
                     YIADVPFYNFPYTFGYLFSLGIYHKAQAEGASYEDKYIALLQDTGSMTTEQLAEKHLG
                     VDLRKADFWEEAVALAAKDVEDFLTLTEEYIK"
     gene            complement(1833..2534)
                     /locus_tag="U0308_002763"
     CDS             complement(1833..2534)
                     /locus_tag="U0308_002763"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEM2317716.1"
                     /translation="MTIGIIGAMEEEVELLKNSMPSVEEIVIGGAKFYVGEIAGKEVV
                     LLESGIGKVNAALGTTLMADRFKPEVIINTGSAGGMAEGLAVGDVIISDRLAYGDVDV
                     TEFGYTYGQVPRMPAFYQGDAVLLKKAETIYREYFAASENKAVYGLVVTNDSFIMRPD
                     QHETIRTFFPDVKAVEMEAAAIAQVAYQFDIPFLIIRAISDLANQEATISFDEFIHLA
                     AKQSATCIIELLKTI"
     gene            complement(2584..3207)
                     /locus_tag="U0308_002764"
     CDS             complement(2584..3207)
                     /locus_tag="U0308_002764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YrrS family protein"
                     /protein_id="HEM2317717.1"
                     /translation="MADKRQSNNRRIKQNLVEGSRSQQNTKRKKTNLVLNVLIIVVSL
                     LIIGSLYFVLFKTESDPTQQDNKTASSTAKKEDAAKSSEKKKDSSDDKTTETTESDDP
                     NVAKVITKDWKPIGTEQTGDHVNSYSSTSVDWQEKRKAFSAATDIPISNTSLWFVEQG
                     ADPATQAIGTLSTKENPDKAYRVYITWVDGEGWQPTKVEELKTNDKR"
     gene            complement(3258..3740)
                     /gene="greA"
                     /locus_tag="U0308_002765"
     CDS             complement(3258..3740)
                     /gene="greA"
                     /locus_tag="U0308_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEM2317718.1"
                     /translation="MATEKVFPMTLDGKAKLENELQELKTVKRKEVVERIKIARSFGD
                     LSENSEYDSAKDEQAFVEGRITTIENMIRNAQIIDAAEAHNGLVTLGNTVTFIELPDG
                     EEETYTIVGSAEADPFEGKISNDSPIAKGLLGHKEGEEVTIQTPAGDMSVKIEKITAS
                     "
     gene            complement(3934..>4174)
                     /locus_tag="U0308_002766"
     CDS             complement(3934..>4174)
                     /locus_tag="U0308_002766"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465022.1"
                     /note="functions in pyrimidine salvage; pyrimidine
                     ribonucleoside kinase; phosphorylates nucleosides or
                     dinucleosides to make UMP or CMP using ATP or GTP as the
                     donor; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HEM2317719.1"
                     /translation="VDTDDDIRFIRRLLRDMKERGRTMDSVIEQYLSVVKPMHNEFIE
                     PTKKFADIIIPEGGENHVAIDLMTTKIESILQKHV"
BASE COUNT         1215 a          819 c          773 g         1367 t
ORIGIN      
        1 tatgcattaa catgggattt agaaaatata tatgctggcg gcagcggctc tgaagaatta
       61 caacaaacgc ttcaagaggt aaaagctgat ttagacagct ttgttgtaaa tgtttcggag
      121 tgggatgttc ctgaaaatgt ggaagcctct gctgaatttt tacttctcgt taatcaaaat
      181 gcagatatat ctaaaatttt actcactgcc ggatcatttt tagaatgtct tgcttccgct
      241 gatatcaatg actcgcgtgc aaatgagctt tcggcgttaa tttatcaata cgttgcaact
      301 ctagctacgg ccgaagatga atggcatgac aaatttgcac aagtttctga ccgtgtttgg
      361 gacgaattaa tggaacaaaa tggtttatcg caaattagct ttattttaag tgaagcgcgt
      421 acgaaccgcc gtaaaaaagg gagtaaagaa caagaagcag ctattaattc tttagctgtc
      481 gatggttatc gcggctggtc tgatcattat gataccattg tcggtaaact ccgcatgcat
      541 gttaccatta acggagaaga aaaagatgtt tctgctggcc aagcgctaaa cttattaaat
      601 caccctgatc gcgcggttcg ccaagcagtt tttaaagaat atacacgtgt atggcaaagt
      661 gaagctcgtt tatttagcga tacgttaaat catttatcag gattccgttt agctacatat
      721 gaaattcgta aatgggataa tattctagat gaacctcttg caattaatcg tttagatgag
      781 caaacgttaa aatctatgtg gaatgtcatc caaacgaaca agcctacttt tgttcgattc
      841 ttagatagaa aagcgaaatt acttggcctt gaaaaattaa gtttttatga tgtagaagct
      901 cctcttgtct tttcaagcga acctaagaaa tattcgtatc aagaaggcgc tgaatttatt
      961 attgagcaat ttaacaaatt cagcccgaaa atggcaaact ttgcgcaatc agcgtttgaa
     1021 aaaggttgga ttgaagcgga agaccgtgat aataaacgtc ctggtggttt ttgtaccgac
     1081 ttccctgttg aaaaagaaag tcgcattttc atgacatatg atggcgctcc aggaacagtc
     1141 gctactcttg ctcacgaact tgggcacgca ttccattcac acgtgattcg cgatgaaccc
     1201 tttgaaaata ctgattatgc gatgaacgtg gcggaaaccg cttcaacttt tgcagaaatg
     1261 attattgcag atgcttctgt gaaagatgca aaaacaaaag aagaaaaaat cacgttgttg
     1321 gaagataaaa tcggtcgtag tatcgccttc tttatgaata ttcatgctcg ctttattttt
     1381 gaatgtaact tctatgaagc acgtaaacaa ggtgtcgttt cggttgatcg acttaacgct
     1441 ctaatggaag aagcgcaacg agaagcatac ttggacgcct tggatgaata tcatccacaa
     1501 ttctgggctt ctaaactaca tttctacatt gctgatgtac cgttttataa cttcccgtac
     1561 actttcggtt atttgttctc gcttggcatt taccataaag ctcaagcaga aggtgctagt
     1621 tacgaagata aatacattgc actactacaa gacactggtt cgatgacaac agaacagcta
     1681 gcagaaaaac atctgggcgt tgacttacgt aaagctgact tctgggaaga agctgttgct
     1741 cttgctgcca aagatgtaga agatttcctt actttaacag aagaatatat caaataaaaa
     1801 aatgcctgga gcttaaaaac tccaggcatt ttttaaattg tttttagtaa ttcgatgata
     1861 catgttgcgg attgtttcgc tgctaagtga atgaattcat caaatgaaat agtcgcttct
     1921 tgattcgcta aatctgaaat agcgcgaata attaagaaag gaatatcaaa ttgataagca
     1981 acttgtgcga ttgccgcagc ttccatctca actgctttta catctgggaa aaaagtgcga
     2041 attgtttcgt gctgatctgg acgcataata aatgaatcat tcgtaacaac gagtccatag
     2101 actgctttgt tttcgcttgc agcaaaatat tcacggtaaa tggtttccgc ttttttaaga
     2161 agtacagcgt ctccttgata aaaagctggc attcttggga cttgaccgta agtgtaacca
     2221 aattccgtta catctacgtc gccataagct aatcggtcag aaataataac atcaccaacg
     2281 gctaatcctt ccgccattcc gccagcagaa ccagtgttaa taattacttc tggtttaaaa
     2341 cggtccgcca taagtgttgt tccaagtgcg gcatttactt taccaatacc tgactccaaa
     2401 agcactactt ctttgccagc aatttcgcca acgtaaaatt tagctccgcc aataacaatt
     2461 tcttctacgc ttggcatgct attttttaaa agttctactt cttcttccat tgctccaata
     2521 ataccaattg tcattatgta acctccaaaa aagcacagtc gttaacagct aacttctgtg
     2581 cttttatctt ttgtcatttg ttttaagctc ttccactttg gttggttgcc atccttcacc
     2641 gtcaacccag gtaatataaa cacgatatgc tttgtctggg ttttctttag tagagagtgt
     2701 accaattgct tgtgtcgcag gatcagctcc ttgctctaca aaccaaagcg acgtatttga
     2761 gattgggata tcagttgctg cagaaaaagc tttacgtttt tcttgccaat ctacacttgt
     2821 ggaactgtac gaattcacat gatcaccagt ttgttctgta ccaataggtt tccaatcttt
     2881 ggtaataact ttcgctacat tgggatcatc gctttcggtt gtttcagttg ttttatcatc
     2941 tgaagaatct tttttctttt cggatgattt agcggcatct tctttttttg cagtggaaga
     3001 tgccgttttg ttatcttgtt gcgtaggatc actctctgtt ttaaacagca caaaatacaa
     3061 actaccaatg ataagtaagc ttaccacgat aattaaaacg tttaaaacta aattagtctt
     3121 ttttcgtttt gtattttgct gggaacgaga tccttccacc aagttttgtt taattcgacg
     3181 gttatttgat tgtcgtttgt ctgccatttg cattcaccac cttataagta accgctgtat
     3241 aaaaacatcc gataatatta agatgcagtg attttttcga ttttaacgct catgtcacca
     3301 gctggtgttt ggatagttac ttcttcccct tctttatgac caagtaaacc tttggcaatt
     3361 ggagaatcat tggaaatttt accttcaaac gggtctgctt cagcgctacc tacgattgtg
     3421 taagtttctt cttcaccgtc tggtagttca atgaaagtaa ctgtatttcc aagtgttact
     3481 aaaccattat gtgcttcagc agcatcaatg atttgtgcgt tacgaatcat attttcaata
     3541 gtagtgatac gaccttcaac aaaagcttgt tcgtcttttg cggaatcata ctcggagttc
     3601 tctgataagt caccaaaact acgggcaatt ttgatccgtt ctactacttc tttacgtttt
     3661 accgtcttta attcttgtaa ttcattttct aattttgctt tcccatctag ggtcattgga
     3721 aatacttttt ctgtcgccaa tcgatttcgc tcctttttgt ttgttcatta ttgtatagaa
     3781 aagcacggag atatcgctcc gcaccttcat caaaaatatt actactcgtc agaaagatta
     3841 acacgccacg ctagaaatag caagcaattg ccactctttt tactagaaaa attttacctt
     3901 aaatttctct atttgacaag tgatacctgt tgtttataca tgtttttgca aaatggattc
     3961 aatttttgtt gtcattaagt cgattgcaac gtgattctct ccgccttctg gaataataat
     4021 atcggcaaat tttttcgttg gttctataaa ttcattgtgc attggtttaa caacagaaag
     4081 atattgctcg ataacagaat ccattgtccg accacgttct ttcatatcgc gtaaaagtct
     4141 gcgaataaaa cgaatatcat catcggtatc caca
//
LOCUS       DASDYK010000165         4156 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.165, whole genome shotgun sequence.
ACCESSION   DASDYK010000165 DASDYK010000000
VERSION     DASDYK010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4156
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.165"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            73..1959
                     /gene="oatA"
                     /locus_tag="U0308_002767"
     CDS             73..1959
                     /gene="oatA"
                     /locus_tag="U0308_002767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan O-acetyltransferase OatA"
                     /protein_id="HEM2317720.1"
                     /translation="MKRTTRYSRKYVPSIDGLRALAVIAVIAYHLNFSWAKGGFIGVD
                     IFFVLSGYLITNILLTQWEKNQSLQLKQFWIRRFRRLIPAVYVMIVVVVIYAVFFHPE
                     ILKNLRGDAIASFFYVSNWWFIFHNVSYFDSFGLPSPLKNLWSLAIEEQFYLIWPAFL
                     LVFLKWVKNPKLLLKIVIGLGLLSAVWMTILYVPGTDPSRVYYGTDTRAFDLLAGCAL
                     AFVWPFNRLSPVVPRKSKSVLNIAGTISILCFILFTAFVSEYQPFLYRGGLLFVAILG
                     VIMIATISHPASYLSKIFSFKPLRWIGTRSYGIYLWHYPIITLTTPVLEITQPNIWRA
                     ILQVAATFIIAELSFRFIETPIRKNGFINYFKGFKDKNYFIWKNKPVGKWLSIAGVVA
                     VLAIFTLGMSNVLSVNTNAEKQQTSVKTTTSTPDEKKDDKKDKEDKATKEKEDSKETD
                     ANKANGQNQTQVPDNKNKTAATPKTMITQTVAIGDSVMLDIEPYLKEAVPNITIDGLV
                     GRQLRDAITTATGYKKFNSENSSVILELGTNGPFTEEQLNDLLDQFDKATIYLVNTRV
                     PRGWQSDVNKSIANASSRPNVTVVDWYSRSSGQSQYFAPDGVHLTKSGAQAYVAMLTS
                     VMNK"
     gene            complement(1992..3812)
                     /gene="inlK"
                     /locus_tag="U0308_002768"
     CDS             complement(1992..3812)
                     /gene="inlK"
                     /locus_tag="U0308_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 internalin InlK"
                     /protein_id="HEM2317721.1"
                     /translation="MSVKSNIVKIGVCFAVLAVPVSQTTFPVFAAEQTGLKASQDNVY
                     IPDSTFKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTGIEYAHNIKDLTIN
                     NIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKI
                     NTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFS
                     QTIGGKKLINSDIKGSALTYNAEKQTLYVPFSLMTERTVNYDGYVPDFVKSTAGSDTY
                     FAMNEKQVNGNRLTITSDGLTVSDVSKADFDNLEKMEYNAKIDLSSQTYNIPDQFKNG
                     GAYNISVPIYDHYFTVDHSVNISADSGKTYIENQPVTEAEFLADIHAKTDDGSTVTSD
                     FADKVDFKTPGTYTVTLQSENNSGLKAAPVQVNVTIKEKTAITADEKITYKVDTSKTE
                     AEFLADIKAKTNDGTAITSDFATVVDLSKPGKYVVTLNAENDLQKALPVQVTVIVEKE
                     TPIPDPTPNPTPDPTPNPTPTPDPTPDPSPTPNPVIKPNVNKPEVPSHKIPSLTVNEK
                     KAKAETSKEALPKTGDSLPVAGATVGFLLISLSWFVSRKK"
BASE COUNT         1213 a          741 c          725 g         1477 t
ORIGIN      
        1 aacagatctc tttactatct ctgtctaggt ttacacacac atatttactt atcacaaata
       61 ggagatgtta ttttgaaaag gactactcgc tacagtagaa aatatgttcc gagtattgat
      121 ggacttcgag cactcgcagt tattgctgta atcgcctacc acttgaattt tagctgggct
      181 aaaggtggat tcatcggcgt agacatattt ttcgtcttat ctggttactt aattacaaat
      241 attttattaa cacaatggga aaaaaatcaa tcacttcaat taaagcaatt ttggattaga
      301 cgttttcggc gactcattcc tgctgtttat gtaatgattg tagtcgttgt catctatgcc
      361 gtcttcttcc atccagaaat tttaaaaaac ttacgcggcg atgcaattgc ttctttcttt
      421 tatgtaagta actggtggtt tattttccac aatgtttctt attttgattc atttggactt
      481 ccatcaccac ttaaaaactt atggtcacta gccattgaag aacaatttta tttaatatgg
      541 cccgcttttt tactggtatt tctcaaatgg gtaaaaaatc caaaactatt attaaaaatc
      601 gtcattggcc ttggccttct ctccgcagtt tggatgacga ttttgtacgt tcctgggaca
      661 gatccaagtc gtgtttatta cggtacggat acgagagcat ttgatttgct agcaggttgt
      721 gcacttgcat ttgtctggcc tttcaatcgc cttagtcctg tagttccaag gaaaagtaag
      781 tcagttctca atattgcagg aacaatcagt attttatgtt ttattctatt cacagctttt
      841 gtaagtgaat atcaaccttt cttatatcgc ggtggcttgt tattcgttgc aattctcggc
      901 gttatcatga ttgcaactat ctcacatccc gcctcttatc taagcaagat tttcagtttt
      961 aaaccactta gatggattgg aacaaggtct tacggtattt acttatggca ttatccaatt
     1021 ataacgttga caacacctgt actagaaatt actcaaccta atatatggcg agctatccta
     1081 caagttgccg ctacttttat tattgctgag ttatcgttcc gctttattga aactcccatt
     1141 cgaaaaaatg gttttatcaa ttattttaaa ggcttcaaag ataaaaacta tttcatttgg
     1201 aaaaataaac ctgttggtaa atggttgagt atcgctggtg ttgttgctgt tttagcaata
     1261 tttacacttg gtatgtcaaa cgttctttcc gtcaatacca atgcagaaaa acaacaaacg
     1321 tctgttaaaa caaccacctc tacaccagac gagaagaaag atgataaaaa agacaaagaa
     1381 gataaagcta ctaaagaaaa agaagactcc aaagaaacgg acgcaaataa agctaacgga
     1441 caaaaccaaa cacaagtgcc agacaacaaa aataaaacag ccgccacgcc aaaaacaatg
     1501 attacacaaa cagtggcgat tggtgattca gtcatgcttg atattgaacc atacttgaaa
     1561 gaagccgttc ctaatatcac aattgatggt ctagttggac gtcaattaag agatgctatt
     1621 acaaccgcta ctggctataa gaaattcaac agcgaaaata gctccgttat tcttgaactt
     1681 ggtacaaatg gtcccttcac agaagagcaa ttaaatgatt tattagatca atttgacaaa
     1741 gcaacgattt atttagttaa tacgcgggtt cctcgtggtt ggcagtctga tgtaaataaa
     1801 agtattgcca atgcttcatc acgacctaat gtaactgttg ttgattggta ttcaagatct
     1861 agtggtcaat ctcagtactt tgctccagat ggtgttcatt taactaaatc tggtgctcaa
     1921 gcttatgtcg ccatgttaac tagcgtcatg aataaataac tatccgccct taattgggcg
     1981 gatagttatt tttatttttt cctagaaaca aaccagctta agctaattag taaaaatcct
     2041 actgttgcac ctgctacagg caaggaatcc cctgttttag gtaaagcctc tttgcttgtt
     2101 tctgctttag cttttttctc atttacagtt aaagatggaa ttttgtgact tggcacttct
     2161 ggtttattga cgtttggttt gataaccgga ttaggtgttg ggcttgggtc cggtgttgga
     2221 tctggtgttg gtgttggatt tggcgtcgga tctggtgttg gatttggcgt tgggtctggt
     2281 attggtgttt ctttttcaac aataaccgtc acttgcactg gcaaagcttt ttgtaaatca
     2341 ttttctgcgt ttagtgtaac gacatatttt cctggtttgg aaagatcaac aacagtcgca
     2401 aaatcacttg taatcgctgt tccatcattt gttttcgctt tgatatctgc taaaaattct
     2461 gcttctgttt tagatgtatc caccttataa gtgatttttt catctgccgt aatcgctgtc
     2521 ttctctttaa ttgttacgtt tacttgaact ggggctgcct ttaatccaga attattctca
     2581 gattgtaaag taactgtgta cgttccagga gtcttgaaat ctactttatc agcgaaatca
     2641 cttgtaacag ttgatccgtc atctgttttt gcatgaatat ctgctaaaaa ttctgcttct
     2701 gtcactggtt gattttctat atatgttttt ccactgtcag ctgagatgtt tacagaatgg
     2761 tcgacagtga agtaatgatc atagataggt acagatatat tgtacgcccc accattttta
     2821 aactgatcag gaatattata agtttgagaa ctcaaatcga ttttcgcgtt gtactccatt
     2881 ttttcaagat tatcaaaatc tgctttactt acatcactta ctgttaagcc atcactcgta
     2941 attgttaggc gattgccatt tacttgtttc tcattcattg caaagtaagt gtcgctgcct
     3001 gcagttgatt ttacgaaatc tggtacatag ccatcataat taactgttcg ttccgtcatc
     3061 aagctgaatg ggacgtataa tgtttgcttt tctgcattat aagttaatgc actaccttta
     3121 atatcggagt taattagttt tttaccccct atagtttggg aaaatgcata cagttgattc
     3181 aatttaggga aatcttctat acctcgataa tcatgtactc cgtcaaattg aatatttaag
     3241 ctcttaagtt ctggcaatgt tttaagtggc atgatatccg ttattgcacc attataacta
     3301 aggtcaatac tatttacttt aggaagtgtg tttattttag ttaaaataga atcatcatgt
     3361 gcactgtgcg aaatatccag tagagttaaa ctcgtcagcc cacttaaatt tggaatttta
     3421 tcggatgtaa catcttttcc cataattctt aatcgttcaa gattactcaa cccgcttatt
     3481 ggattatagt ttgttgcatg aatattattt atggttaaat cttttatatt atgggcatat
     3541 tcaatacctg tcaaatcagt aacatttata ttcgctaaag taatatatgt taatgaattc
     3601 atttgtgctt cagtaatatt cgctgtactc gattgtccta ataatccatt taagtacgct
     3661 ttaaatgttg aatctggaat gtacacatta tcctgacttg cttttaatcc agtttgctct
     3721 gcagcaaata ccgggaatgt tgtttgcgat acggggacag cgagtactgc aaagcatacc
     3781 ccaattttta cgatatttga ttttactgac ataagttatt accatctcca ctctgttata
     3841 ttcgcctagt aaattttaag aggtatcctt aaaagaaact ttatgatgta attatagtct
     3901 cctcagcata tgagaccaat agacaaaatg tgtacaaaaa tggttgaaaa agcaaaattt
     3961 agtatctttt taggattttt ctattcacat ctcctgattt tatgcggttt ttatttggca
     4021 tttaaactag taaaaaaaag ggctattttt gtcgaatttt tgtcgaaatg aaatcataat
     4081 atttttataa gctattttat agataaaaaa ctatccactc gagaattttg agtagatagt
     4141 tttttattta ttttta
//
LOCUS       DASDYK010000166         4042 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.166, whole genome shotgun sequence.
ACCESSION   DASDYK010000166 DASDYK010000000
VERSION     DASDYK010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4042)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4042)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4042
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.166"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..90
                     /locus_tag="U0308_002769"
     CDS             <1..90
                     /locus_tag="U0308_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317722.1"
                     /translation="RFYFDASVDSAAMTVIGNIHENSEILEEQ"
     gene            217..609
                     /locus_tag="U0308_002770"
     CDS             217..609
                     /locus_tag="U0308_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317723.1"
                     /translation="MREIEYRAFVKETKKILPVTDLCFNETESVGVSGCGNPYCTMCV
                     DWYNFDDVLLMQYTEREDINNNKIFEKDIATCQFFDKKITGVIEFIEFMWAVIDHKNQ
                     RLYQLNEVSNIEVVGNVEENPELLEVSE"
     gene            606..791
                     /locus_tag="U0308_002771"
     CDS             606..791
                     /locus_tag="U0308_002771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317724.1"
                     /translation="MNDKKTDYKVYKITYKQRFMGEVIVDSYERTVKDDNELRSAINA
                     LYDDPHVFSVSSEEVAE"
     gene            788..1078
                     /locus_tag="U0308_002772"
     CDS             788..1078
                     /locus_tag="U0308_002772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003769971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317725.1"
                     /translation="MILYGVVTYDEATEWTTDLLTAKKWVENAKQVFYDGELDEDYYV
                     ALIKLDVEAFLYDKYDKETDLSDQLHDEAETLKEYRLRLDDDGTYMVKEVAE"
     gene            1078..1263
                     /locus_tag="U0308_002773"
     CDS             1078..1263
                     /locus_tag="U0308_002773"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317726.1"
                     /translation="MCKFCNDDLKKRESVVDEMDPQDKIWLTSDKELVTNIVRNKEEY
                     SAYFNIKYCPVCGRSLE"
     gene            1264..1494
                     /locus_tag="U0308_002774"
     CDS             1264..1494
                     /locus_tag="U0308_002774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317727.1"
                     /translation="MENARERKRMYEKETGEIQNRIDAFDRALEQAPNLDTKMEYMQT
                     INSLRELLIIKFEGLAIASDEIINELEEGINE"
     gene            1487..1696
                     /locus_tag="U0308_002775"
     CDS             1487..1696
                     /locus_tag="U0308_002775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317728.1"
                     /translation="MSELTELKQTLKDLLEDLEIMKNADDQLIKLSGSTTSKSLNYLW
                     EDIRYTITQIKEINYKIQIMEEELK"
     gene            1693..2214
                     /locus_tag="U0308_002776"
     CDS             1693..2214
                     /locus_tag="U0308_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317729.1"
                     /translation="MTKYYRIEKGTKAYEYLDKIYNQDTSAFLDEVTKLIGFDANGHI
                     GINREELIIKKSTLEELKPEWMHKFKRYQGEWMTPKVVLKELISSYAELRKKYNMDYE
                     FMYFCINNRLAGGVKVIYDFNSSGFTYLESNRDVENNDFDQVSEIKYLERKAELLAFE
                     IEQKKNMEQEVSK"
     gene            2211..2390
                     /locus_tag="U0308_002777"
     CDS             2211..2390
                     /locus_tag="U0308_002777"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317730.1"
                     /translation="MIPPFKIAEDEFIAISTAEELLEYIQHANELVSVVRESRSKAYK
                     ELASRGLQPLKEVQE"
     gene            2387..2647
                     /locus_tag="U0308_002778"
     CDS             2387..2647
                     /locus_tag="U0308_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317731.1"
                     /translation="MTNYHILLYAESGGVKILFNDYNKENITFDELKTSILKRLGNVD
                     SVNRINRDKVKVKQIITNSTSIKEMTEKINFETELRLDVREV"
     gene            2651..2824
                     /locus_tag="U0308_002779"
     CDS             2651..2824
                     /locus_tag="U0308_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014930904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317732.1"
                     /translation="MTKQIIINEANSLLHRKSKELSKSIIKTPKDLERFAVGLDKLSQ
                     DMWDYKNELEAIK"
     gene            2821..3204
                     /locus_tag="U0308_002780"
     CDS             2821..3204
                     /locus_tag="U0308_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317733.1"
                     /translation="MSIFAGDKIEVQDRSGVAELCVDGEQFHVLMNNGGLLTVEDEDG
                     FSSFNIPATQVKKVKVNSDVKLINELYGQSDAVSFSIYNADIDKAKLFVSNVNKPQFD
                     ERNNVKWYSASKGKITATAFLKGDD"
     gene            3206..3685
                     /locus_tag="U0308_002781"
     CDS             3206..3685
                     /locus_tag="U0308_002781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siphovirus Gp157 family protein"
                     /protein_id="HEM2317734.1"
                     /translation="MSTLYSIQGKYQQLLNLAEQLDPELLKDTLESIDDELETKAENV
                     AFVIKELEGQSLILEKETKRLAERKNTINNNVKRLKQSLFDAMITANKQKIKTNLFTL
                     DIRKNPPSLIVEDESKLLNYLIEQPKKLDKTKLGDDLKKGIEVPGAKIIQTERLQIR"
     gene            3698..>4042
                     /locus_tag="U0308_002782"
     CDS             3698..>4042
                     /locus_tag="U0308_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2317735.1"
                     /translation="MEFIQSEKMKRSEYFNIMIYAKPGAGKTTTIKYLEGKTLMLDCD
                     GTSKVLSGLPNITIATLDPRNPVQDMADFYGYAKAHAEEYDNVVIDNLSHYQKLWLMF
                     NGRNTKSGQPELQ"
BASE COUNT         1607 a          548 c          850 g         1037 t
ORIGIN      
        1 agattctact tcgatgctag cgttgattca gcagctatga cagtgatagg caacatacac
       61 gaaaattcgg aaatattgga ggaacagtaa atgacgttaa gagaagcatt agagaagcac
      121 acaagatata tcttgttttg tggcatgtgc gagtgtggac ttgtatggac tatctgaatt
      181 taaattcaaa aataagccga aggaagggac gatagcatga gagagattga atatagagcg
      241 tttgtaaaag aaactaagaa aatacttcca gtcacagatt tgtgttttaa cgaaacagag
      301 tctgtaggcg taagtggttg cggcaaccca tattgtacaa tgtgcgtcga ctggtacaac
      361 tttgacgatg tcctgctgat gcaatacaca gaaagagaag acatcaacaa caataaaata
      421 tttgaaaagg acattgcaac ttgtcagttt ttcgacaaaa aaatcactgg tgttatcgag
      481 tttatcgaat ttatgtgggc agtaattgat cacaagaatc aacgactata tcagttgaac
      541 gaagttagca atattgaagt tgttggaaat gtggaagaaa acccggaatt gttggaggtg
      601 tcggaatgaa cgataaaaaa acagattata aagtatataa aataacatac aagcaacgtt
      661 tcatggggga agttattgtt gattcatatg aaagaacggt aaaagatgat aacgaattac
      721 ggtctgcaat taacgcttta tatgacgacc cacatgtgtt ttcagttagt agtgaagagg
      781 tggcggaatg attttatatg gggtagtaac atatgacgaa gcaacagagt ggacaacgga
      841 tttgctaaca gccaaaaaat gggtagaaaa tgctaagcaa gttttctatg acggagaact
      901 tgatgaagat tactatgttg cgttaataaa gttagacgta gaagcattct tatacgataa
      961 atatgacaaa gaaacagatt tgagtgatca gttacacgat gaagctgaaa cattgaaaga
     1021 gtatcgtttg agattagatg atgacggaac ttacatggtg aaagaggtgg cggaataatg
     1081 tgtaaatttt gcaacgatga tttgaaaaaa cgagaaagcg ttgttgatga aatggatcca
     1141 caagataaaa tttggctgac aagtgataaa gaactcgtta ctaacatagt tagaaataaa
     1201 gaggagtact cagcttattt taatatcaag tactgcccag tttgcggaag gagtttggaa
     1261 taaatggaga atgcacgtga acgcaaaaga atgtacgaga aagaaactgg ggagattcaa
     1321 aatcggatag acgcatttga tagggcgtta gaacaagcac ccaacctaga tactaaaatg
     1381 gaatatatgc aaactataaa cagtctaagg gaactcttaa taataaaatt cgaaggacta
     1441 gcaattgcgt cagatgaaat cataaatgaa ttagaggagg gaataaatga gtgaattaac
     1501 tgaactaaaa cagacactca aggatttact cgaagacttg gaaataatga aaaacgcaga
     1561 tgaccaatta ataaaactta gcggaagtac tacgtcgaaa agtctaaact atctatggga
     1621 agacatcaga tatacaatca cacaaatcaa agaaataaat tataaaatac aaattatgga
     1681 ggaggaacta aaatgacaaa atattatcgg attgaaaaag gtacaaaagc atatgagtat
     1741 ttagacaaaa tttacaatca agacacaagc gcttttttag acgaggtcac aaaacttatt
     1801 ggatttgatg cgaacggtca cattggtatc aatcgtgaag aattaataat aaaaaaatca
     1861 actttggaag aattaaaacc agaatggatg cacaaattca aaaggtatca gggtgaatgg
     1921 atgacaccga aagttgtgct aaaggagtta atcagttcat atgcagaact tcgaaaaaaa
     1981 tacaatatgg attatgagtt catgtatttt tgcataaata accgcttggc gggcggtgtc
     2041 aaagttatct acgattttaa ttccagtggg tttacatatt tggaatctaa tagagatgtg
     2101 gaaaacaatg attttgacca agtgtcagaa attaagtatc tcgaaagaaa agcagaactc
     2161 ttagcttttg aaattgaaca aaagaaaaac atggagcagg aggtaagcaa atgattccac
     2221 cattcaaaat cgcagaggac gaatttatag ctatttctac agcagaagaa cttttagagt
     2281 atatccaaca tgcaaacgag cttgtaagtg tagtaagaga atcaagaagc aaagcgtaca
     2341 aagaattagc aagtcgaggc ttacagccat tgaaggaggt gcaagagtga caaactatca
     2401 tattttactt tacgcagaat caggcggagt caaaatatta ttcaatgatt acaacaaaga
     2461 aaacattact tttgatgaac ttaaaacatc gatcctaaag cgattaggca atgtggactc
     2521 tgtgaatcgc atcaatagag ataaagttaa agtgaaacaa atcattacaa attcaacttc
     2581 aataaaggaa atgacagaaa aaatcaattt cgaaacagag ttacgtcttg atgtaaggga
     2641 ggtatgaaaa atgacaaaac aaatcatcat caacgaagct aacagtttac ttcacagaaa
     2701 aagcaaagaa ctaagtaaat caatcatcaa aacacctaaa gatctcgaac gtttcgcggt
     2761 tggactagat aaattatcac aagatatgtg ggattataaa aatgaattgg aggcgattaa
     2821 atgagtattt ttgctggcga taagatagag gtacaggatc gaagtggtgt agctgaattg
     2881 tgtgttgatg gtgagcagtt tcatgttctg atgaataatg gtggtctgct aactgttgaa
     2941 gatgaagacg gattttcatc ctttaacata ccagcaaccc aagtcaagaa agtgaaagtg
     3001 aatagtgatg ttaaattaat aaatgagcta tatggccaat cagatgcagt aagttttagt
     3061 atatataatg cagatataga taaagctaag ttgtttgtat ctaatgtaaa taagccacaa
     3121 tttgacgaaa gaaacaatgt gaagtggtat tctgcatcaa aaggcaaaat aacagcaaca
     3181 gcatttttga aaggagatga ttaaaatgtc aacattatac tcaattcaag ggaaatatca
     3241 acagttgtta aatctagcag aacagcttga tccagaatta ctaaaagata cccttgaaag
     3301 tatcgatgat gaactagaaa cgaaagctga aaacgtagca tttgttatta aagagctaga
     3361 aggtcaatcg ctaatcttag aaaaagaaac aaagcgttta gctgaacgga aaaatactat
     3421 taataataat gtgaagcgac tgaaacaatc gttatttgat gcaatgataa ctgccaataa
     3481 gcaaaaaatt aaaacaaact tattcacatt agatatccgg aagaacccgc caagcctcat
     3541 tgtagaagac gaaagcaaac tgctgaatta cctgattgaa caaccaaaaa aattagataa
     3601 aacaaaatta ggcgatgatt tgaagaaagg tattgaggta ccaggtgcga aaattattca
     3661 aacagaaaga ttgcaaataa gataaggagg gatttcattg gaatttattc aatcagaaaa
     3721 aatgaaaagg tcggagtatt ttaatattat gatttatgca aaaccgggag cagggaaaac
     3781 aacgacgatt aagtatttag aaggaaaaac attaatgttg gattgtgatg gtacgtcgaa
     3841 agtattaagt ggattaccta atatcacgat tgcgacatta gatcctcgaa atcccgtaca
     3901 agatatggct gatttttatg gatatgcgaa ggcacatgca gaggaatatg acaatgtagt
     3961 aattgataat ttaagccatt atcaaaaatt atggttaatg tttaatggga gaaatacaaa
     4021 atcaggtcaa ccagaactac aa
//
LOCUS       DASDYK010000167         4024 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.167, whole genome shotgun sequence.
ACCESSION   DASDYK010000167 DASDYK010000000
VERSION     DASDYK010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4024)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4024)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4024
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.167"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..513
                     /locus_tag="U0308_002783"
     CDS             <1..513
                     /locus_tag="U0308_002783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2317736.1"
                     /translation="YAAVELEDNLRKTNYISIFVLPYNVLGIDAFSSYPKKKHSITVM
                     SEHLMLYKIDADFLLNILSIKPDVNDFLLTSIADVFARHYALLGMIAKTPKERIYMAL
                     ENLAVEMGTEDEERNEIVLPNFINQSVLARYCRTTQPNISNLLTELVEEEFLVNKKSP
                     YRIDKDSLDI"
     gene            complement(527..835)
                     /locus_tag="U0308_002784"
                     /pseudo
     CDS             complement(527..835)
                     /locus_tag="U0308_002784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464266.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
     gene            complement(900..1409)
                     /locus_tag="U0308_002785"
     CDS             complement(900..1409)
                     /locus_tag="U0308_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2317737.1"
                     /translation="MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSD
                     MLISISEVLETPVSTLLGETVMVSKVDDVKAISEKLEIINLQLAQRKTARRKMLYWLF
                     VSLCAVIAIISSVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVV
                     GIFLTRKNV"
     gene            complement(1686..3590)
                     /locus_tag="U0308_002786"
     CDS             complement(1686..3590)
                     /locus_tag="U0308_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2317738.1"
                     /translation="MKKAFLCLSAVVLSLNFVWVNPLSGLASKIETTKLKSTMDTNQQ
                     VNLKNNATDIVTSEDLGGQTWLINEVNRQLAPKKVGVDLTFDDLAKIKIISLSNKSLT
                     GEVPPEIKNLVSLEKLLLYSNKLSGEIPAELGELTNLSELRLDYNQFTGKIPDGLGKI
                     SSIALQNNELVGQIPLSLYENRTGTNEVNVSGNQVTINSREPEPSIYSYSTFIYPATT
                     PQYSGHLTATTTYFSNVTNDTLLTPFLSGSSTFIDLHAEFMLDRELFEGHEVTITDES
                     SGKILYEGELNSDISISLKSFSSGYHNIRVVLDNAPNNPQNQVTFGISMASTVAGDLT
                     VNYVDEDGKTIHDPQIVSGFVGDDYDVTTPDYELVIDGYELDTSKLPTNGMGTFDYAP
                     LSVTYVYKKMEGAPVTVKYVDENGNEITTSDTLTGKLDDSYHAKAKEITGFTLDNSKL
                     PVNASGVFETNPQTVTYVYNAVPAKIKAHDSTIYVGDTWSAEDNFDSAVNSVGAAVSF
                     DDVKVEGKVDTTKAGVYPVTYSFSGEAVTINVTVKAKVIPAPPVTPVQPINPDQPNIP
                     NTPSVDQTHVAKPGNLKVTKTQPTVAGKIKLPTTGDNLWDSVLYSVFGLIAVCVAFSL
                     FFWRKKQKHS"
BASE COUNT         1244 a          786 c          629 g         1365 t
ORIGIN      
        1 tatgctgcag ttgaattaga ggataattta agaaaaacga actacatttc catctttgtt
       61 cttccatata atgttttagg aattgatgca ttttcctctt atccgaaaaa aaagcatagt
      121 attacggtca tgagtgaaca tttgatgctc tataaaatag atgctgactt tttactcaac
      181 atattatcga ttaaacctga tgtaaatgat tttctcttaa caagtattgc tgacgttttt
      241 gctcgtcact atgcgcttct tggtatgatt gcaaaaacgc cgaaagaacg gatttacatg
      301 gctttagaaa atcttgcggt agagatgggc actgaagatg aagaaagaaa tgaaattgta
      361 ttaccaaact ttatcaatca gtcagttctt gcaagatatt gccgcacaac gcagccaaac
      421 atatccaatt tactaaccga acttgtagaa gaagaatttt tggtcaacaa aaaaagccct
      481 taccggattg ataaggactc tttggatata tgagattgat attaatttaa taacttaaat
      541 catttccatt agtttcaatt acttttttat accaatagaa acttttcttc ttcaaacgtt
      601 tatagctatt atctttatca acatcaacaa agccatatct tttctcgaaa ccttcacgtg
      661 ttgaataaag agctattatt cactaaatta gataaacgtt tatgtcacaa ccttcttcaa
      721 tggcttcttg catacgcgca atatgtgagg ccaaataatc aattcggtac gtagaatcaa
      781 ttgtctagcc ccgttcggtt gtttgacaat atgggtttgg tgctttgatt ccgttccttt
      841 ttacaaacag taattttgaa gtctgactca tccctaaaag catccaagat agtacgcttt
      901 tatacgttct tccgcgttaa aaaaatccca acgactcctc ctataaggat aatcggtgct
      961 aaccggacaa acaaccattc aaatgtatga aaagctactc cgataacgct agtttcaggg
     1021 tcactataat cccaacctaa gtaaggacta tttagtatta taaagaccga agaaattatt
     1081 gctataacgg cacacaacga gacaaatagc caataaagca tttttcgtct ggcggtcttt
     1141 ctttgtgcaa gctgtaagtt tataatctcc agtttttcgg agatcgcttt tacgtcatca
     1201 acctttgaaa ccataacagt ttctccaagc aaagtgctta ctggtgtttc aagcacttcc
     1261 gatatggaga ttaacatatc agaatcagga actgacaatc cttgctccca tttagagatt
     1321 gtttgtcgca ccacattcag tttgatggca atttcttctt gcgaaagtcc ttttgatttc
     1381 ctgattgctt taatattttc gtttaacatt agagataccc acctttcttc cagttgttat
     1441 cactattgta tgagaactcg tccattgcta caagcaacgc atattaacat tcaaacttta
     1501 tagccacgat atgcagtttt gtatttacta tcacatccat agtacctttc aatcataaaa
     1561 atattatttt gctttcttta attcagaata ggacgtaaag ttattttttg ctggtatacc
     1621 gtttttagtt ggtatctctt tagcacatta cccttttaaa ataggcagcc tagttctaat
     1681 atatttcagc tatgcttttg ctttttacgc cagaagaata aactaaatgc gacacatact
     1741 gctattaaac caaatacact atacagcaca ctatcccaaa gattatcccc tgtagttggt
     1801 agttttattt ttcctgctac tgtaggttgt gtctttgtta cctttaaatt tccaggtttt
     1861 gcaacgtgag tctgatctac gctaggtgta tttggaatgt ttggttggtc tggattaatt
     1921 ggttgaacag gtgttactgg tggtgctgga ataactttag cttttacagt tacattaata
     1981 gtcacagctt ccccggaaaa actataagta accggataaa cacctgcttt tgtcgtgtct
     2041 actttccctt ctacttttac atcatcaaag gaaactgcag ctccaacaga atttactgcg
     2101 ctatcaaaat tatcctctgc gctccatgta tctcctacgt aaatcgtgga atcatgcgct
     2161 ttaatttttg caggtactgc attatacacg taggtgactg tttgtggatt tgtttcaaaa
     2221 acgccgcttg cattgactgg tagcttacta ttatctaatg taaatccagt aatttctttc
     2281 gcttttgcgt gataagaatc atctagtttt ccggtcaaag tgtcagaagt agtgatttcg
     2341 ttgccgtttt catctacgta ttttactgtg acaggtgcgc cttccatttt tttatagaca
     2401 tacgtgacag atagtggcgc gtagtcaaaa gtgcccatcc cattggttgg taatttggaa
     2461 gtatctaatt cgtacccatc aattactaat tcgtagtcag gcgttgttac atcataatca
     2521 tcacctacaa atccactaac tatctgtgga tcatgaatcg tttttccatc ttcatctaca
     2581 tagttaactg tcaaatcacc agccaccgta cttgccatgc tgataccaaa agttacttgg
     2641 ttttgtgggt tgttcggcgc attatcaagt acaactcgaa tattatgata gcctgagctg
     2701 aaacttttca aagaaatact aatgtcagaa tttaactcac cttcgtaaag tattttacca
     2761 gaagactcat ctgtaattgt tacctcatga ccttcaaaaa gttccctatc taacataaac
     2821 tccgcatgca aatcaataaa agtagaactg ccagaaagaa aaggagtaag caatgtatca
     2881 ttcgttacgt tgctaaaata agtggttgtt gccgtcaaat gcccactata ttgaggtgta
     2941 gtcgctggat aaataaaagt tgagtaggag taaatacttg gttccggctc tctactatta
     3001 atggtcactt ggttacctga tacatttact tcatttgttc ctgttcgatt ttcgtataag
     3061 ctcaaaggaa tttggccaac cagttcgttg ttctgtaacg caattgacga aatctttcca
     3121 agtccatcag gaatttttcc agtgaattga ttgtagtcta atcgaagttc tgataaattc
     3181 gttaattccc ctaattcagc aggaatctct cctgatagct tattagaata taaaagcaat
     3241 ttttcaagag atactaaatt tttaatctcc ggtggtactt caccagtaag cgatttatta
     3301 ctcaatgaaa tgatcttaat tttagccaaa tcgtcaaatg ttaaatccac accgaccttt
     3361 ttaggcgcta attgtctgtt tacttcatta atcaaccacg tctgccctcc taaatcttcc
     3421 gaagtaacaa tatcggttgc attatttttc aaattaactt gttggtttgt atccattgtt
     3481 gatttcaatt ttgttgtttc gattttggat gccaacccag aaagtgggtt aacccacaca
     3541 aaatttaatg acaaaacaac agcggatagg catagaaacg cttttttcat tcgtgtataa
     3601 cctccagtaa tatttattac tcctaaaatt atacgctaaa cagccactca aaaacgcctt
     3661 cctaagtagc aaaatttcct atttatgaac atttcttgaa cgttttatat cacaaaaaca
     3721 gtatttcatt ccattttcaa gtaattattt ttgacacatt ttcacgaata aaaacgaaaa
     3781 taatttacta taaaaaatct aattagcaaa gattcaaaag tacgaaagta attgatatta
     3841 cttatttcca attaaaatac aactcaaaaa aaaagcgttt caaaagataa ttccaacatt
     3901 ttcaaaacat cccaaatcat cgaaatccac ttgaattcaa cctcgttttt ggataaagtt
     3961 acacttttat ccatttttac aattttgtca aaaaaacgtc acaatttaac agctggacac
     4021 agct
//
LOCUS       DASDYK010000168         4011 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.168, whole genome shotgun sequence.
ACCESSION   DASDYK010000168 DASDYK010000000
VERSION     DASDYK010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4011)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4011)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4011
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.168"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(130..1059)
                     /locus_tag="U0308_002787"
     CDS             complement(130..1059)
                     /locus_tag="U0308_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF561 domain-containing protein"
                     /protein_id="HEM2317739.1"
                     /translation="MSLTEMLQIKYPILQGAMAQIATYELASAVSNAGGLGIIASGGM
                     SADTLREQIRLCKEKTTKPFAVNIMLMMPNCPELVDVIIEEDVRVVTTGAGTPKPFME
                     KFKAAGIKVIAVIPSVKIAQKMEEIGVDAVVAEGTEAGGHVGETTTMALVRQVVSAVN
                     IPVIAAGGIADGHGMAAVYALGASGVQIGTLFLVAEECPVPASFKQAVLDATDTSTTV
                     TGRRNGAPVRSIKNPMIQKYVELENENASRDKLEELTLGSLRKAVHEGDVENGSVMAG
                     QICGMLKEIRSTSDIIESLMKESKQVASNLVIQ"
     gene            complement(1081..2304)
                     /locus_tag="U0308_002788"
     CDS             complement(1081..2304)
                     /locus_tag="U0308_002788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HEM2317740.1"
                     /translation="MTKEINRWGVLIGSVGVLLCTGAVYAFSVFAGPLSAAHGWTIPQ
                     VMMAFTINAAIGPIPTILGGILTDKGKAKWAILIGGILFGLGFALTGFATSTTMLYLS
                     YGVLAGLGQGFAYSGCLSNTIRLFPDKRGLASGLITAGMGGATIIAAPIANHLIETYN
                     VMTAFKIMGAVYIAVVIGCSFLIRVAPAGYAPKGWTPPANNAAGMVNVPWTGMVRTVT
                     FYLILLMLGIGAFSGLMIASNASLIGQNMFGLTAASAAAYVSIYSLSNCLGRVVWGAV
                     SDRLGRSNTLMIIYTVIALSLLALATLQSVVGFVIGIIGLGLCFGGTMGVFPSIVMEN
                     YGPKNQGVNYGIVFIGYSTAAFFAPKMAAQIAGQNGGDFTQAFYIAIALAAVGLCINI
                     VYKLREKKQPTKELA"
     gene            complement(2301..3884)
                     /locus_tag="U0308_002789"
     CDS             complement(2301..3884)
                     /locus_tag="U0308_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HEM2317741.1"
                     /translation="MSKVIKASEAAKLLKDGDTVAFSGFGLACVNEEMAIAVEKRFLE
                     EGAPRNLTVMHASALGDRREKGMSHWGHEGLIKRWIGGIAIASPKMAKLIEEDKCEAY
                     NLPQGVITQLYREIAAKRPGVITKIGMGTFVDPRIEGAKMSASSKDNLVELLTIHDEE
                     WLFYPSFPIQVALIRGTVADEFGNLTLEKEGLHMEVLPIAQAVRNSGGIVIAQVESVA
                     KKGSLNPKDVRVPGILVDHIIISEPENHFQTENTQYNPAFSGHIQVPLGDIEPLPLDD
                     RKVIARRSAAELEPQTILNLGVGIPVNVSTVAAEEGVSDQLILTTEAGSVGGVPAGLA
                     DFGHAYNSEAIVDHHSQFDFYDGGGLDLSVLGLAQTDESGNVNVSKFGSRVAGCGGFI
                     NISQSAKKLIFAGTFTAGGLKTRVADGKLEILQEGKAKKFIKQVQQITFSGEYASTTD
                     QIILYVTERAVFRLENGKMVLTEIAPGVDLEKDILGQMEFEPVIASDLKVMDSGMFSE
                     QWGGLKTIIEKQTREGVSI"
BASE COUNT         1164 a          940 c          682 g         1225 t
ORIGIN      
        1 gcaagcctta tcgctgtcat cattacagct gttctactta tttatttgat ggtagactta
       61 acaaaaatgt atcgacgtaa ataaaaaaag agtcagcaaa atccaccagg atattactga
      121 ctctttttat tattgaatca ctaaattgct tgcaacttgt ttagattctt tcatgaggct
      181 ttcgataata tcactagtgg aacgaatttc ttttaacata ccacaaattt gtccagccat
      241 aactgaacca ttctcaacgt caccttcatg tactgctttt ctaagagagc caagtgttaa
      301 ttcctctaat ttgtctctgg aggcattttc gttttctagt tcaacatatt tttgaatcat
      361 tgggttttta atacttctaa ctggcgcacc attgcgacga cctgttacag tcgtgcttgt
      421 atccgttgcg tcaagtaccg cttgtttaaa gctagctgga accggacatt cctcagcaac
      481 aaggaaaagt gtgccgattt ggacaccgct tgcgcctaac gcataaacag ctgccattcc
      541 gtgaccatct gcaataccgc ctgctgcaat gacaggaata tttactgctg aaacaacttg
      601 acgaacgagt gccatcgttg ttgtttctcc gacatgtccc cctgcttctg tcccttctgc
      661 aacaacagcg tccacaccga tttcttccat tttttgagca attttcacag acgggataac
      721 ggcgataact ttaattccag ctgctttaaa tttttccata aatggtttag gcgtgcctgc
      781 cccagttgta acaactcgca catcttcttc aataataaca tcgacaagtt ctggacaatt
      841 tggcatcatc agcatgatat ttacagcgaa cggttttgtt gtcttttctt tacaaaggcg
      901 aatttgttct cgtaatgtgt ctgctgacat tccacctgat gcgataattc ctagcccacc
      961 tgcatttgat accgcggaag ctaattcata tgtggcaatt tgtgccattg ccccttgtaa
     1021 aattggatat ttgatttgta gcatttcagt taaactcatt ttcttttctc ctctctattt
     1081 ttacgctaat tctttagttg gttgtttttt ctcacgtaat ttataaacaa tattaatgca
     1141 aagtcctaca gcagcaagtg cgatagctat atagaaagct tgtgtgaagt cgccaccgtt
     1201 ttgaccggcg atttgcgctg ccatttttgg tgcaaagaag gccgctgtgg aataaccaat
     1261 gaagacgatt ccgtagttga cgccttgatt tttcggaccg taattttcca taacgataga
     1321 cgggaaaacg cccattgttc caccaaagca aagtccaagt ccaataattc cgataacaaa
     1381 tccaacaaca gattgaagcg ttgcaagtgc tagtaaagat aaagcaatca ctgtatagat
     1441 aatcatcaat gtattagatc tacctagacg gtcagataca gcgccccaaa ctactcgacc
     1501 taaacagttg cttagtgaat aaatactaac gtaagcagca gccgatgcag ccgtcaagcc
     1561 aaacatattt tgaccaatta aggatgcatt agaagcaatc atcagaccgg aaaatgcgcc
     1621 aatacctagc attaaaagaa tcagataaaa agtaactgtt cgaaccattc ccgtccaagg
     1681 tacatttacc ataccagctg cattattagc aggcggtgtc caaccttttg gtgcataacc
     1741 agctggtgcg acgcgaataa ggaaactaca tccaatgaca actgcgatat aaacagctcc
     1801 cataatttta aatgctgtca ttacgttata tgtttcaatt aagtggttcg caatcggtgc
     1861 agcaatgatt gtcgctccac ccattcctgc agtaataagt ccagaagcaa gaccacgttt
     1921 atctgggaaa agacgaatcg tgttactaag acatcctgaa tacgcaaaac cttgcccaag
     1981 cccagcaagg acaccataag acaaataaag catcgtcgtt gaagtagcaa atcctgttaa
     2041 cgcaaaacca agcccaaaca ggattccccc aattaaaata gcccattttg ctttcccttt
     2101 atccgttaaa atcccaccta aaatagttgg aatcggtcca atcgcagcat taattgtaaa
     2161 tgccatcata acttgcggaa ttgtccaacc atgagcggca cttagcggtc cagcaaaaac
     2221 actaaatgca tataccgcac cggtacaaag cagaacacca acagagccaa ttaagactcc
     2281 ccaacggttt atttcttttg tcatatagat actccctctc ttgtttgttt ttcaataata
     2341 gtttttaagc cgccccattg ttcactaaac ataccgctat ccattacttt taaatcactc
     2401 gcaataacag gttcgaattc catttgtcca aggatatctt tttctaaatc tactcctggc
     2461 gcgatttctg ttagaaccat tttgccattt tctaaacgga atacagctcg ctctgtcaca
     2521 tagaggatga tttggtcggt cgttgaagcg tattcgccac taaatgtgat ttgttgaact
     2581 tgtttgataa actttttagc ttttccttct tgtaaaatct ctaattttcc gtcagctaca
     2641 cgcgtcttta atccacctgc tgtaaaagtt ccggcaaaaa ttaatttttt cgctgattgg
     2701 gagatattaa taaatccacc gcagccagca actcttgagc caaacttgct gacattcaca
     2761 ttaccggatt cgtcggtttg cgccaaacca agtacggata aatcgagtcc tccaccatcg
     2821 taaaaatcga actgcgaatg atgatcgaca atagcttcac tgttataagc atgaccgaaa
     2881 tctgctaaac ctgctggaac accaccaaca gaaccagctt ccgttgttag tattaattga
     2941 tcactcacgc cctcttccgc tgctacagtt gatacgttca ccggaattcc tacacctaaa
     3001 tttagaatag tttgtggttc tagttctgct gctgaacgac gcgcaattac tttacggtca
     3061 tctaacggaa gtggctcaat atctccaagc ggaacttgaa tatgccctga aaaagctggg
     3121 ttgtactgtg tattttcagt ttgaaaatga ttttccggtt ctgaaataat aatatgatca
     3181 accaaaattc ctggaactct aacatcttta ggattaagcg atcctttttt cgcaacagat
     3241 tctacttgag cgattacaat tccgcctgaa tttcgaactg cctgtgcaat tggtaagact
     3301 tccatatgta agccttcttt ttctaacgtt aagttcccaa attcatcagc cacagttccg
     3361 cgaatgagcg caacttgaat tgggaaactt ggataaaata gccattcttc gtcgtgaatc
     3421 gtcaatagct ctactaagtt gtctttagaa ctcgcggaca tttttgcccc ttcaatacgt
     3481 ggatctacaa atgttcccat gccaattttt gtaatcacgc ctggccgttt agctgcaatt
     3541 tcacgataca gttgcgtaat tacaccttgt ggtaaattgt atgcttcaca tttgtcttct
     3601 tcaattagtt tcgccatttt aggagaagca atcgcaattc cgccaatcca gcgtttaatt
     3661 aatccttcat gtccccagtg actcattcct ttttccctgc gatcaccaag cgcactagca
     3721 tgcataactg ttagattacg cggtgcccct tcttctaaaa aacgcttttc aaccgcgata
     3781 gccatttctt cattaacaca agctaaaccg aaaccactaa aagcaacagt atcgccatct
     3841 tttaataatt ttgctgcttc actagctttt attacttttg acaaattcct cactcctcat
     3901 tgttcaatta ttcacatata tttgtaatga catgcagttc tttataaagc aacttccgtg
     3961 ccaacatcaa aaatggctct ataaagcact ttataaattc aaatattatt t
//
LOCUS       DASDYK010000169         4010 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.169, whole genome shotgun sequence.
ACCESSION   DASDYK010000169 DASDYK010000000
VERSION     DASDYK010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4010)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4010)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4010
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.169"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            95..520
                     /locus_tag="U0308_002790"
     CDS             95..520
                     /locus_tag="U0308_002790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphatase family protein"
                     /protein_id="HEM2317742.1"
                     /translation="MTQKLIYFLSQTHIRSAIAEAWAKRLSLSNVKFISGSWHKSKST
                     PFIAEALNEFAIEPPESLSYSPSSELLADADLIVTIYDSAHETAPKFPANIQEKIIYW
                     DIDDPEQEIALPKKWASYQEVCDNIALSVKNLEHVLIEA"
     gene            584..1453
                     /locus_tag="U0308_002791"
     CDS             584..1453
                     /locus_tag="U0308_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM2317743.1"
                     /translation="MDGYNDLKKAEKAAFLSIFAYLFLAVLKIVAGQLGNSDALLADG
                     LNNTTDIVASVALLIGLRISRIPPDADHSYGHRRTETISSLIASIIMFLVGVQVIWSS
                     IVHIIEKEFATPSMLTAVVALFSGVFMYAIYLYNHRLAKKLDSQAVRAAAYDNRSDAF
                     VSLGAFIGIIGAVLGVPWLDSVTAFLVGILIVYTAIKIFYDAAHTLTDGFDVSKLETI
                     HDLIASVPDVKKVIDIKARMNGNKIWIDATIAVDPELNVVKSHAITEIVEQKIRNEYE
                     GAFTLVHIEPFFE"
     gene            1709..3013
                     /locus_tag="U0308_002792"
     CDS             1709..3013
                     /locus_tag="U0308_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEM2317744.1"
                     /translation="MILTIKFLIIALLIAISAFFVATEFAIVKMRPSRLDQLIAEKDK
                     RAVLARHIYNHLNAYLSACQLGITISSLGLGWLGESTVEAALHPLFSLMELPQSAITI
                     LSFTIAFLFITFLHVVVGELVPKTLAIDKTEAVALAVARPLHIFYKVMFPFIWILNGS
                     AVFIARLFGLEPASEHEIAHTEDELKIIVGESYKSGEINQSEFRYVNKIFDFDERMAK
                     EVMIPRTEIVTVDTGSTIGELSDIMQNERYTRYPVIDGDKDHVIGVLNLKEILSAYVE
                     HGSNPSFSIDPYVKPIIRVIETIPIKELLFRMQRERSHIAILLDEYGGTSGLVTVEDI
                     VEEIVGDIRDEFDADEIPEIRKIKDGHFIVDAKLLIDEVNNILGTEIEEEEVDTIGGW
                     FLTQNYEVEVGDEIDYDGFIFRVKQGEPHHIEYIEIIKKTND"
     gene            complement(3054..3932)
                     /locus_tag="U0308_002793"
     CDS             complement(3054..3932)
                     /locus_tag="U0308_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2317745.1"
                     /translation="MNLHHLRYFVTLAHMEHYTKAAEKLLITQPSLSHAISSLEQELG
                     IPLFEKEGRNIGLSKAGKVFLDYVEESLDMIDAGVATTKKAANGEGQIDLAFLQTLGT
                     SLIPKLVQEFLQTEPEKQIDFIFHTGVSIDIIQGLKEKKFDIGICSKLENERNIHFTP
                     IAKQELVLIVPKSHPLAEKDWIDLIETVDYPHIAFSKKSGLRPIIDDLFRKIGADYQI
                     AYEIEVDQVIAGMVAQNFGIAVVPNMPILNYVDVKVLPIRSPNWERFFYLAVAKNQTL
                     TPAAEKFKQFMLAHRI"
BASE COUNT         1200 a          714 c          788 g         1308 t
ORIGIN      
        1 ctttggtaat aattatcacc tatatactgt gtacaacaag taatggcagc aagttttaca
       61 tgggtacatt aatacgccgg aaaggaattg gaatatgacg caaaagctga tctacttttt
      121 atcacaaacg catattcgaa gtgccattgc tgaagcttgg gcgaaaagac tttcacttag
      181 caatgtcaaa ttcattagcg gttcttggca taaatctaaa tcaacaccgt ttattgcaga
      241 agcgttgaat gagtttgcaa tcgagccacc tgaaagtttg tcttattccc ctagctcaga
      301 actactggca gatgctgatc tcattgtaac aatttatgat tctgcacatg aaactgcacc
      361 aaaatttcca gctaacatac aagaaaaaat tatttattgg gacattgatg atccggaaca
      421 agaaatagcg ttaccaaaaa aatgggcgag ttatcaagaa gtatgtgata acattgcctt
      481 atcagtaaaa aatttagagc atgtattgat agaggcttag atttcgttgt cccgccattc
      541 gtaggcggga cttttatgtt aaaaagaaag gagtacatac ataatggatg gatacaacga
      601 tttaaaaaag gctgaaaaag cggcattttt gagtatattt gcctatttat ttctagcggt
      661 tttaaaaata gttgctgggc aattaggaaa ctctgatgcc ttacttgcag atggtttgaa
      721 taatacgact gatattgttg cttctgttgc gcttttaatt ggccttagaa tttctcgtat
      781 tccacctgat gcagatcatt catacggaca ccgacggact gaaactatta gctctttaat
      841 cgcatctatc attatgtttc tcgttggcgt gcaagttatt tggagttcaa ttgttcatat
      901 tatcgaaaaa gaatttgcaa caccctcgat gttaactgct gttgtcgcgc ttttttctgg
      961 tgtatttatg tatgctattt acttatataa tcatcgactt gcgaaaaaac ttgatagcca
     1021 agctgtgcga gctgctgcat atgataatcg ttccgacgca tttgttagtt taggtgcgtt
     1081 tatcgggatt attggggctg ttcttggtgt tccttggctt gattccgtga cggccttttt
     1141 ggtcggtatt ttgattgttt atactgctat caaaattttc tatgatgctg cacatacctt
     1201 gacagatggt ttcgatgttt ctaagctcga aactattcat gatttaattg cttctgtacc
     1261 tgatgtcaaa aaagtaattg atattaaagc gcgaatgaat ggaaataaga tttggatcga
     1321 tgcaactatc gctgtggatc ctgaactaaa tgtagttaaa agtcatgcaa tcaccgaaat
     1381 cgttgaacaa aaaattcgta acgaatacga aggtgcgttc actttagttc atattgaacc
     1441 attttttgaa taatattcat tgtcaataat cgtaaagtca actataattt agattaaagt
     1501 atcatttgct gggagggaat attcgatggg gcagagaaac taattcacat aaattatcta
     1561 actagaatga aaaataggca acaacacatt ggaggagttc tcttccagga cggtttttct
     1621 tctatataga tagttttata atatgcttat ttatattaaa ctaggaggtg tttgccttag
     1681 cagaaactat ttctgtcaag gcgatttatt gatattaacc attaaatttt taattatagc
     1741 tttacttatt gctatatcag catttttcgt ggcaacagaa tttgcgattg ttaaaatgcg
     1801 accaagccgt ttggaccaat taattgcgga gaaagataaa cgcgcagtcc tcgctagaca
     1861 tatttacaat catttgaacg cttacttatc agcctgccaa ctcgggataa cgattagttc
     1921 ccttggactt ggttggttgg gggaatctac ggtagaagcg gcgttacatc cgttatttag
     1981 cttaatggaa cttccgcaat cagctattac gattctatcc ttcacgattg cctttctatt
     2041 tatcacattc ttgcacgtag ttgttgggga acttgtaccg aaaacactgg cgattgataa
     2101 aacagaggca gttgcacttg cggtagctcg tccactgcat attttttata aagtgatgtt
     2161 cccgttcatt tggattttaa atggttctgc cgttttcatc gcacgtcttt ttggtttaga
     2221 gccagcttcc gagcacgaaa ttgctcatac cgaggatgaa ttaaaaataa tcgtcggcga
     2281 aagttataag agtggtgaaa tcaaccaatc agaattccgt tatgtgaata agatttttga
     2341 ttttgatgaa cgtatggcga aagaagtcat gattccgcga acagagattg ttaccgttga
     2401 tacgggctct actatcgggg aattatccga cattatgcaa aatgaacgct atacgcgcta
     2461 tccggttatt gatggcgata aagaccacgt tatcggcgta cttaatttaa aagaaatttt
     2521 gtcagcatat gttgagcatg gatctaatcc aagttttagc attgatcctt acgtaaaacc
     2581 aattattcgt gtgattgaaa caattccgat taaagaatta cttttccgta tgcagcgtga
     2641 acgttcccat atcgcgattt tacttgacga atatggtggt acttctggac ttgttacggt
     2701 tgaagatatt gtagaggaaa tcgttggtga tatccgcgat gaatttgatg ccgatgaaat
     2761 tccagaaatt cgcaaaatca aagacggtca ctttattgtg gatgcgaaac ttcttattga
     2821 tgaagtaaat aatattttag gtactgaaat tgaggaagaa gaagtcgaca caattggcgg
     2881 ctggttctta acgcaaaatt atgaagtaga agttggggac gaaattgatt acgatggatt
     2941 cattttccgc gtaaaacaag gcgaacctca tcatattgaa tatatcgaaa tcatcaaaaa
     3001 aacgaatgac taatcaaaaa gtagctatcc ctctcgtagg atagctactt tttttatata
     3061 cgatgcgcta acataaattg cttgaacttc tcagctgcgg gcgttagcgt ttggtttttc
     3121 gcgactgcga gataaaagaa tctctcccag tttgggcttc taattggtaa gactttgaca
     3181 tccacataat ttaaaatcgg catgttcgga actacagcaa tcccaaagtt ttgcgcgacc
     3241 attccggcaa tgacttgatc cacttcaatt tcatatgcaa tttgataatc ggcaccaatt
     3301 tttctgaaca aatcatcgat aattggacgc aaaccacttt ttttcgagaa tgcgatatgc
     3361 ggataatcta ccgtttcgat taaatcaatc cagtctttct cagcaagagg atggcttttg
     3421 gggacgatga gcactaattc ttgtttggca attggcgtaa agtgaatatt tctttcattt
     3481 tcaagtttag aacaaatacc aatatcaaat ttcttttctt ttaggccttg aatgatatca
     3541 atcgaaacac ctgtatggaa aataaaatcg atttgttttt ctggttcggt ttggagaaat
     3601 tcttgaacaa gctttggtat tagagacgtg ccaagtgttt gcaagaatgc caagtcaatc
     3661 tgcccttccc cattcgccgc ttttttagtc gtcgcgacac ccgcatcaat catatctaag
     3721 gactcttcca cataatcaag aaatactttg ccagctttac ttaaccctat attccgccct
     3781 tctttttcaa ataaagggat acctaattct tgctctaagg aggaaattgc gtgacttaaa
     3841 ctaggctgtg taatcagcaa tttttcagct gcttttgtgt aatgctccat gtgcgccagt
     3901 gtgacgaagt atcgtaaatg gtgtaaattc atgcttctct cctaactaaa aagttatcta
     3961 tgcaatttat ctatcaatta atagaacaat accaatttgt ttttatggaa
//
LOCUS       DASDYK010000170         3865 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.170, whole genome shotgun sequence.
ACCESSION   DASDYK010000170 DASDYK010000000
VERSION     DASDYK010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3865
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.170"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..175
                     /locus_tag="U0308_002794"
     CDS             <1..175
                     /locus_tag="U0308_002794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317746.1"
                     /translation="TIIMFVIAIRQASSLRTDAWAKILTTIDPQFPVEFLNEKKWQKA
                     FLAQMESMNEQLA"
     gene            complement(308..1498)
                     /locus_tag="U0308_002795"
     CDS             complement(308..1498)
                     /locus_tag="U0308_002795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEM2317747.1"
                     /translation="MEKNIETKKINLALLVCLVGFPQISETIYTPSLTEIATSYGVSL
                     NLAQMTLSIYFLAFAVGVFFWGVSSDFLGRRKAMNFGIFIYILGCFVCLFSNNITMLF
                     IGRFVQAFGASTGSVTTQTILRDNYHGNDRHHLFAKISAALAFSPAIGPLIGGFIGQY
                     YGFRVVFLFLVVMGMILLFWSLKRLPETKTANATPFSVQKMVVIGKKMIFDRYTIAFG
                     VLIGIFNGILFSYYSEAPTIFIERFHFNQSQYGFMGCAVATATILGAWLSNWRLKQNS
                     PHKIIKEGILLALIGTLFLSMVALFPLTIQVIFYIFFISIILVGIGMSLPNCLSLALV
                     KFQEVAGTAGAFLSLGYYVIVSLCTFFIGVLHSGSILVFPAFCLVLLLIALLCIKIAA
                     RNNP"
     gene            2099..2494
                     /locus_tag="U0308_002796"
     CDS             2099..2494
                     /locus_tag="U0308_002796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactococcin 972 family bacteriocin"
                     /protein_id="HEM2317748.1"
                     /translation="MKRKVCVLAIALPTVLSPMGALAAQNLNEGETSLDSLMSANKTG
                     EKVIFSETTTGKKPLLKAAQSAGGGTFWVTWGQDRHYSNYQHYKKMHRSSASNFRTTV
                     RSRWEPKSNLASVWIKSSLWGNKANWATK"
     gene            2557..>3865
                     /locus_tag="U0308_002797"
     CDS             2557..>3865
                     /locus_tag="U0308_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin immunity protein"
                     /protein_id="HEM2317749.1"
                     /translation="MKKFLSIIILVTLVIGNIMFFTFISNTLSRDFLFKDQTEVQFKY
                     KDDFQVLEVNNSIKQFSEANNINIAQYTFLDERDLNIYASNPQYSPNIKLEKGDYPDK
                     NRFLVNRESGDEKQSGVIYHPSKYWSLKVYDFGQIKNVGLSDTFYVSGLDNQDTYQAF
                     LKEFEQYGEITTKSVDVSWWKYINIPLLMTLLLCFAILFVFTYYYLRYSKQRLLVNRI
                     WGNSELVTLMSLFNKTIIFTLFSVLAILITFVSIVLANGLATYLVEIVWKLLLFNVLL
                     FIFILFPMYFFGLLRIKKIDQAKSDQRMQSSRQHLAINLVIKFVLLCLFIGTFIASYQ
                     SLQTLNTRLANIDVWEATKDIFKVKVGVLPEGIQDNLKADKELNNNLSAFYEEGTSKK
                     EMFLMYSNNFQRSETNTFFYETYLKKDSEINSPEGNSVEIDFNY"
BASE COUNT         1340 a          580 c          724 g         1221 t
ORIGIN      
        1 aacaataata atgtttgtaa tagcgattcg ccaagcatct tcattacgta cagacgcatg
       61 ggctaaaatc ttaaccacaa ttgaccctca gtttcccgtt gaattcctaa atgagaagaa
      121 atggcaaaaa gccttccttg ctcaaatgga aagtatgaac gaacaattag cataatcaga
      181 gaagtattag acttttagag gtttaatact ttttttattc cccgggaaat aaatagtatt
      241 ttatattgtg ataacattta aaataaaact ggcaccgttt caagatagaa acggtgccag
      301 ttttttgcta agggttattt ctagcagcta tttttataca gagcaaggca attagaagta
      361 atactaggca gaatgcggga aatacaagta ttgatcctga atgcaaaacg ccaatgaaga
      421 aagtacaaag actgacaatt acataatatc ctaagcttaa aaaggcgcca gctgtaccgg
      481 caacttcttg aaatttcact agtgctagac ttaaacaatt tggtaaagac atgccaattc
      541 ctactaagat aatagaaatg aagaagatgt agaatataac ttggatagta agcgggaata
      601 gggcaaccat gctaagaaat agagtgccaa taagagctag caaaattcct tctttaatga
      661 ttttatgagg tgaattctgc tttaagcgcc agttcgatag ccaagctcct aaaatagttg
      721 ccgtagccac tgcgcacccc atgaagccat actgactctg attaaaatga aacctctcaa
      781 taaaaatagt aggagcttca gagtagtaac taaacaatat tccattaaaa ataccaatta
      841 gcactccaaa agcaattgta tagcggtcaa aaatcatttt tttaccaatt actaccattt
      901 tctgcacact gaatggggtg gcgttcgctg tttttgtttc tggtagtcgt tttaaactcc
      961 agaacagcaa tatcattccc ataactacta aaaataaaaa aaccacgcga aagccgtaat
     1021 attgtccgat aaatccacca attaatggcc caattgccgg tgaaaatgcc aaagcggctg
     1081 agatttttgc aaataaatgg tggcgatcat taccgtggta gttgtcacgc aaaatggtct
     1141 gtgttgtaac agaacccgta cttgcgccaa atgcttgaac aaagcgtccg ataaaaagca
     1201 ttgtaatatt atttgaaaaa aggcagacga agcaaccaag aatatagata aatatcccaa
     1261 agttcattgc ttttcgtcga cctaaaaaat cggaactaac gccccaaaag aagacaccaa
     1321 ctgcaaaagc aagaaagtag atgcttaaag tcatttgagc caaatttaat gagacgccgt
     1381 agctcgtagc aatctccgtt aaagaaggcg tataaatagt ttcgctaatt tgtggaaacc
     1441 ccacaaggca cacaagtaat gctaaattta ttttctttgt ttcgatgttt ttttccataa
     1501 aattctctcc tgaataagtt atttatctgg gaaaaaaaca tctttcacag ggaaatggtg
     1561 ggaccatgat tttaatacgc tcgtaaaaaa gcatgcagtc acccctttct attttaaacg
     1621 gagaaggttc cgttttttcg ttaaagttta ttgtagtata aatgggtgga aagataaagt
     1681 gttggtggac gattgaataa atatacactg atatttactt gaattcagca tttaagtgaa
     1741 caagttcaaa tatatgtggt taagttaagc tggtatatga aacttttgtg actatcaagc
     1801 ttgaggctga atagaaacat gtataatgag ctgtctagcg cttttttatt ctgaaaatgg
     1861 agtttttgta acacgatatg tgtagaaaat gcactaagac actataactt tagctattta
     1921 ggataagaat ggagtcgttc attacatttt ggttatacat tacttttttg tgttacattg
     1981 ggaatagttg gaatattata aaagtaaaaa tttggaggtt tcatagggaa ggatatattc
     2041 taacctgttt atttggttat gcaatataac tattaattgg aaagaggggg agaatacaat
     2101 gaagagaaaa gtatgtgttt tagcgatagc attgcctaca gtgttatcac cgatgggcgc
     2161 cttagctgct caaaatctaa atgaaggaga gactagctta gattcactaa tgagcgcaaa
     2221 taaaacaggt gaaaaagtga ttttttctga gaccacaaca ggaaaaaaac ctctattaaa
     2281 agcagcgcaa tcagctggag gcggtacttt ctgggttaca tggggacaag atagacatta
     2341 ttcaaattat cagcattata aaaaaatgca tagatcaagt gcctctaatt tcaggacgac
     2401 agtaagaagt aggtgggaac caaagagcaa tctagcaagt gtttggatta aatcatcgct
     2461 atggggtaat aaagctaatt gggctacaaa ataattccta taaagctaag aaattattat
     2521 gtttcttagc tttatagtta aactaaggat gatttaatga aaaaatttct ttccattatc
     2581 atattagtaa cacttgtcat tggtaatata atgtttttta cttttattag taatactttg
     2641 tcgcgtgatt ttctttttaa agaccagaca gaagtgcagt ttaaatataa agatgacttt
     2701 caggttttag aagttaataa ttctataaag caattttcag aagcgaacaa tattaacata
     2761 gcgcagtata catttttaga tgaacgcgat ttgaatattt atgcctctaa tccccagtat
     2821 tcaccaaata taaagcttga aaaaggagat tatcccgata aaaatcggtt tttggtgaat
     2881 cgggaaagtg gcgatgaaaa acaatcgggt gtgatttatc atccttctaa gtattggtct
     2941 ttaaaggttt atgactttgg acagattaaa aatgtgggtc taagtgatac tttttatgta
     3001 agcggcttag ataaccagga tacgtatcag gcttttttaa aggaatttga acagtacggg
     3061 gaaataacta cgaaaagtgt tgatgtgagc tggtggaaat atattaatat cccgttactt
     3121 atgactttgc ttttgtgttt tgctattttg tttgttttta catattacta tttaagatac
     3181 tctaaacaac ggttattagt taatcgtata tgggggaatt ctgaattagt tacattaatg
     3241 tctttgttca ataaaactat aatatttact ttgtttagtg tgttagcaat tctgataact
     3301 tttgttagta ttgttttagc aaatgggcta gccacgtact tagtggagat agtgtggaag
     3361 ttgcttttat ttaatgtact tttatttatt tttattctgt ttccaatgta tttctttgga
     3421 ttacttagaa taaagaaaat tgatcaagca aaatcagacc agcgtatgca atcatcaaga
     3481 cagcatttgg caatcaatct agttattaaa tttgtgctgc tctgcttatt tataggtact
     3541 tttattgctt cttatcaatc acttcagaca ttaaatacaa gactagctaa tattgatgta
     3601 tgggaagcta caaaggacat ttttaaagta aaagtagggg ttttacctga ggggattcaa
     3661 gataacttaa aagctgataa agagctaaac aacaatttaa gtgcttttta tgaagaaggt
     3721 acatctaaga aagagatgtt tttaatgtat tcgaataatt ttcagcgaag tgaaactaat
     3781 acttttttct atgaaactta tttgaaaaag gactctgaaa taaactcacc tgagggtaat
     3841 agcgtagaaa ttgattttaa ttact
//
LOCUS       DASDYK010000171         3855 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.171, whole genome shotgun sequence.
ACCESSION   DASDYK010000171 DASDYK010000000
VERSION     DASDYK010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3855)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3855)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3855
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.171"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            186..1901
                     /locus_tag="U0308_002798"
     CDS             186..1901
                     /locus_tag="U0308_002798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEM2317750.1"
                     /translation="MIDKRLFQLVEKKSLVLLILFRVLSLGLMIGLWFVFAQQLTYYL
                     EGQSVDWLWLIGTVLVVLVGKAILTKLAEKQIYQASAELRLSMRRAVMEKAFRLGNNE
                     GQLPASTLTQLAVDGIEQLEIYYSRFLPQLFYCLIASLMIFGSLVGFAWQPAIVLLIC
                     MPMIPIVIMAVMKIAKRILSGYWSDYTNLGTKFHENLSGLSILKAYNQDKYKQEEIVS
                     DAERFRKATMSLLSMQLNSITIMDIISYSGAALGIGMSLIMFTNGNISMTGMLMFLLL
                     SAEFFIPMRQLGSLFHVAMNGISACSKLFAYLELKEQVYGSEELAKPLEKMEVRHLTY
                     TYEEGKAKALQDISVNFNKGSFSALVGKSGSGKSTFVRVLLNQLPGYQGEIVWNDVPL
                     ASLSGETIRKQAVLVDNHGYLYANRIRENLLIGNPAANDSDLWNVLEQVSLADFVRKL
                     PEQLNENLEENGSNLSGGQRQRLLLARALLCQAEVYVFDEITSGVDLESEKIILLVLQ
                     KLAKEKIVLFISHRLYNVLDADQVLVFDAGKLLEVASPERLQQESNYFKNYFLEEEAL
                     LKGGA"
     gene            1903..3549
                     /locus_tag="U0308_002799"
     CDS             1903..3549
                     /locus_tag="U0308_002799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317751.1"
                     /translation="MSEWTIIGWLLKFVKPLRGKMVLAILLGIISNLSVIMISLIGTY
                     GIITVILQQHLNPYKWLFVMVACGVVRGLARYSEQYLNHDIAFRLLAIIRERIFATLR
                     KLGPARLSGKKSGDLVAAITTDVEALEVFFAHTISPVFIALGTTIVTVGFLASYDVGL
                     ALILLLGQILVGVVLPVISYKRNKKIGTAYQQEFVGLNQMVMESIASLQDIFQFKLGE
                     ERLSKLETQGEKLNKQYKKRIKQGSELQIFGEWVLIGTATLILVLGSLWQLPLETVLI
                     GTVLSLSSFGSVLALNALGTALLTTFASGKRLYTLTEEKPVVLFNGQLELSDFESVEL
                     DKVSFSHDGKQPLLNEISLALPKRKWLGIGGESGSGKSTLVKLLMRYWDPKGRIKLND
                     NALPEITESSLHRLEGVMEQSTFLFEDTLGNNIRLGKKDATLEEVKEAARKAAIDTWI
                     ETLPEGYDTIIGGQSRNLSDGERQRIGLARLFLHDAPLLLLDEPTSNLDYINEQAILN
                     TLRSEIQDKTVLVISHRATTLDLAEEQLFIENGALKRAAK"
     gene            complement(3586..>3855)
                     /locus_tag="U0308_002800"
     CDS             complement(3586..>3855)
                     /locus_tag="U0308_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEM2317752.1"
                     /translation="AVIQTTGKVSYEQLVEHLEALRAKTVKEPGCVLFEIVPLESALG
                     RFALWEIWQNQEAFYYHHEQNYTKEFFAAELDTVEFFESSEKVNL"
BASE COUNT         1192 a          569 c          868 g         1226 t
ORIGIN      
        1 aaataaatga caatgagaat cattatcaaa cgttgatttt tgtgatataa taaacaaaga
       61 tttattaatg ggggttagca agcaaatggg aaaagtagta ttgaaaatgg cttatactgc
      121 cgaaaaatca aagaaaatat taaggtatct tgaaacgaac cttaatgtaa ctcgggggaa
      181 gtacaatgat tgataagcgt ttgtttcaac tggttgaaaa gaaatcttta gtgttattaa
      241 ttctttttcg tgtgcttagt ttagggctga tgattggtct ttggtttgtt tttgctcaac
      301 aattaacgta ttatttagag ggccaaagtg tcgattggtt atggcttatt ggaacggttt
      361 tagttgtttt agttggtaaa gcgatactta ccaaattagc ggagaaacaa atttaccaag
      421 catcggcgga attgcgttta tcaatgaggc gcgctgtgat ggaaaaagct tttcggttag
      481 gcaacaacga aggacagcta ccggcatcaa ctttaacgca gctcgcggta gatgggattg
      541 aacaattaga aatttattat tcacgttttt taccgcaatt attttattgt ctcatcgctt
      601 ctttgatgat ttttggaagt ttagttggat ttgcttggca gccggcgatt gtgctattaa
      661 tttgtatgcc gatgattccg atagttatta tggcagtgat gaaaattgct aaacggattt
      721 tgagtggtta ttggtcggat tatacgaatt taggaaccaa atttcatgaa aatttaagtg
      781 gcttgagtat tttgaaggct tataaccaag ataaatataa gcaagaggaa attgtttctg
      841 atgcggaacg tttccgtaaa gctacgatga gtttgttatc gatgcaactg aattcgatta
      901 cgattatgga tattatttcg tatagtgggg cggcacttgg tattggtatg tcgttaatta
      961 tgttcacaaa tgggaatata agcatgactg gtatgttgat gttcttacta ctaagcgccg
     1021 aattctttat tccaatgcgt caactcggat ctttattcca tgtggcgatg aatggaatta
     1081 gtgcttgcag taaattgttc gcttatttag agttaaaaga gcaagtttat ggctcagaag
     1141 aactagctaa accgttagaa aaaatggaag ttcgtcattt gacatataca tatgaagagg
     1201 gtaaagctaa agcactgcaa gatatatcag taaatttcaa taaaggaagt ttttcagcac
     1261 ttgtcggaaa gtctggttca ggaaaaagta catttgtccg agtattatta aatcaattac
     1321 ctggttatca aggggaaatt gtttggaatg atgtaccttt agctagtttg agcggggaaa
     1381 ctattcgtaa acaagctgtg ttagtagata atcatggtta tctttatgca aatagaattc
     1441 gggaaaattt attaattggt aatccagctg ctaatgatag cgatttatgg aatgttttgg
     1501 agcaggttag tttggctgat tttgttcgga agttacccga gcaattaaat gagaatttag
     1561 aagagaatgg aagtaattta tctggtgggc aaagacagcg attgttactg gcgagagcat
     1621 tgctatgtca agcggaagtc tatgttttcg atgaaattac gtctggtgtg gatttggaaa
     1681 gtgaaaaaat tattcttttg gtgttgcaga aattagctaa agaaaaaatc gtgctcttta
     1741 tttcgcatcg cttatataat gttttggatg cggatcaggt actcgttttt gatgcgggga
     1801 aattgctgga agtggcgagc ccagaacgat tacagcaaga atctaattac ttcaaaaact
     1861 actttttaga agaagaagca ttgctgaaag ggggagcatg acatgtcaga atggacaatt
     1921 attggctggt tgttaaagtt tgttaagcca ttacgaggaa agatggtttt ggcgatttta
     1981 cttggtatta ttagtaattt atcggttatc atgatttctt taatcggtac gtatggcatt
     2041 atcacggtaa ttttacagca gcatctgaat ccttataaat ggctctttgt aatggttgct
     2101 tgtggggtgg ttcgcggttt ggcacgatat tcggaacagt atttaaatca tgatattgcc
     2161 tttcgtttgc ttgcaattat tcgtgaacgt atttttgcga ctttgcggaa actaggacct
     2221 gctcgtttat ctggaaagaa aagtggtgat ttagttgctg cgattacaac agatgtcgag
     2281 gccttggaag tgtttttcgc gcatactatt tcaccagttt ttatagcact aggtacgacg
     2341 attgtaactg ttggcttttt ggcaagctat gatgttggtt tagcgctgat acttttgtta
     2401 ggacaaatct tggttggtgt cgttttgcca gtgattagtt ataaacgaaa taaaaaaatc
     2461 ggaacggctt atcaacaaga attcgttggg ctcaatcaaa tggtaatgga aagcattgca
     2521 agtttacaag atatattcca gtttaaattg ggcgaagagc gtttgagtaa attagaaaca
     2581 caaggtgaaa agctcaataa gcagtataaa aaaagaataa aacaaggaag cgaactccaa
     2641 atatttggtg aatgggtgct aattggtacg gcgactttaa ttttagtgct aggtagtctt
     2701 tggcaattac cgcttgaaac agtattaatt ggaactgtgc ttagtctgag ctcttttgga
     2761 tcggtattgg cattaaatgc tttaggaaca gcgctgttaa ctacttttgc tagtggtaag
     2821 cgattatata cattaacaga agaaaaacct gtggtattat ttaacggcca gcttgaacta
     2881 tcggattttg aaagcgtgga gttagataaa gtgagtttta gtcatgatgg aaaacaacca
     2941 cttttaaacg aaatttcgct agcgcttcct aagaggaaat ggctcggcat cggtggggaa
     3001 agtggcagcg ggaaaagtac cctagtaaaa ctactgatgc gttactggga tccaaaaggt
     3061 cggattaaat taaatgataa cgcactccct gaaattacag agtcttcgct tcatcgacta
     3121 gaaggtgtaa tggagcaaag tacattcttg tttgaagata cacttggtaa taatattcgt
     3181 ttaggaaaaa aagatgctac tttggaagaa gttaaagagg ccgcccgaaa agctgctatc
     3241 gatacatgga ttgagacttt gccagaagga tatgacacga ttattggcgg gcaatcacga
     3301 aatttatcag acggcgaacg ccagcgaatt ggcttagcta gactatttct ccatgatgcc
     3361 ccgttgttat tattagatga accaacaagc aatttggatt acattaatga acaagcgatt
     3421 ttaaacacgc tccgttcaga aattcaagat aaaacggtgc tcgtaatttc tcaccgagca
     3481 acaacattag acttggcaga agaacaatta tttatagaaa atggtgcatt gaaacgtgca
     3541 gcaaaataat aaaaacagct tgtataaatt acaagctgtt tttatttata aatttacctt
     3601 ctctgagctt tcgaaaaatt caaccgtgtc aagttccgct gcaaaaaatt ctttcgtata
     3661 gttctgttcg tgatgataat aaaaggcttc ctgattctgc caaatttccc acaaagcaaa
     3721 tctgccgagt gcactttcta aaggaacaat ctcaaataaa acacatcctg gttctttcac
     3781 tgttttagcg cgtaacgcct ccaaatgttc gaccagctgt tcataagaaa cttttccggt
     3841 agtttgaata actgc
//
LOCUS       DASDYK010000172         3831 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.172, whole genome shotgun sequence.
ACCESSION   DASDYK010000172 DASDYK010000000
VERSION     DASDYK010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3831
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.172"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            187..2517
                     /gene="secA2"
                     /locus_tag="U0308_002801"
     CDS             187..2517
                     /gene="secA2"
                     /locus_tag="U0308_002801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system translocase SecA2"
                     /protein_id="HEM2317753.1"
                     /translation="MRQNYDDRKIVKQYREIARQIVKKEGLYKNMDQAELCEQTNFWR
                     EKFKTKPMTDRDKINIFALAREAASRIIGLDAVVVQLIGALVLGDGKVAEMKTGEGKT
                     LMSLFVMFIEVMRGNRVHLVTANEYLARRDREEIGQVLEYLGVSVALNESGLDIAQKK
                     AIYTADVIYGTASEFGFDYLRDNMVRQKEDKVQSGLDFVLIDEADSILIDEARTPLLI
                     SDRKEEDLSLYHTANKLVKKMMKDDYEMEEHKRFVWLNDAGIEKAQKFWGVESLYSAE
                     AQSELRITMLLMRAHFLMHKDKDYVVLDDEVLIIDPHTGRALPGRRFNDGLHQAIEAK
                     EGVEVKEESRTLATITIQNYFRMYKKISGMTGTAKTEEEEFRQIYNMDVVVIPTNLRV
                     NREDMQDDIFYTKKEKGRAIVYEVSWRYEKGQPTLIGTSSIKSNEWISGLLDAAGIPH
                     QVLNAKNHAQEAEIIAKAGKRGMVTLATNMAGRGTDIKLDPDVHKLGGLAVIGTERHE
                     SRRIDLQLMGRSGRRGDPGFSKFMISLEDDLLEQFESKSWEKLSTKLKRKAPRDGKPV
                     NSRKIHAVVVDAQKRLEGANYDIRKDLLSYDEVIDLQRKMVYKERDLLLERNKLGVSS
                     EKILREVAEYSFIHPSDIPEEELEIYYSRQKELLGGTKFPISFDQVTLMDPREVVEEI
                     VSWHKKERNKFPAETIAAIEREVYLNLMDQMWVMHLDAMVQLREGIHLRAYGQQDPLV
                     MYQKEGAQLFEKFQADYHFYFAHALLELDPDGLIQG"
     gene            2633..3805
                     /locus_tag="U0308_002802"
     CDS             2633..3805
                     /locus_tag="U0308_002802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM2317754.1"
                     /translation="MKGSFTKFKQFFIENKFVLGLLIFLLVALDIYVLTKIAFIFDPL
                     MVILKTVAAPIILAGISYYLFNPIIDWLEKHKWKRGWAIALLYLVIIGLLILLFSFVI
                     PAVKDQIVSLFKSFPGYWDQITQKFDEFSRSSLFDQIKDKLNTNMSDIMKTLSTKGTS
                     VINSAISSIGSIVGTVTEVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVNGRAHTRQ
                     VLGEANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVPYLGPA
                     IAITPAIIIAIVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFVILV
                     AGNLFGVLGVIFAVPGYAVLKVIVTHVFIWFKRISGLYGEQPESEYVESPTEEKEL"
BASE COUNT         1272 a          599 c          813 g         1147 t
ORIGIN      
        1 tgtaagtggg atgtgaacgt taatcaacaa ctttcgctat gggaaaccta ttgttttttg
       61 ttaatagaaa aacttaatac atttgtaata taaaaatcgg cagtttttcc gttcttcgtg
      121 actcgaaatg aattgccaga tgagtttatg gtattctata atagaaggta tggaggatgt
      181 tatataatga gacaaaatta tgatgatcga aaaatagtga aacagtatcg agaaatagcc
      241 cgtcaaattg taaaaaaaga gggcttatat aaaaatatgg atcaggctga actttgtgaa
      301 caaactaatt tttggcgcga gaagtttaag acaaaaccga tgactgatcg agataaaatt
      361 aatatttttg ctttggcgag agaagcagct agccgaatta ttggtttgga tgcggttgta
      421 gtgcaattaa taggagcgct cgttctcggc gatggcaaag tggcagaaat gaaaaccggc
      481 gaaggtaaaa cattgatgtc gttatttgtt atgtttatag aagtaatgcg tggtaatcgt
      541 gtacaccttg tgactgccaa tgagtattta gctagacgtg accgggaaga aattggacaa
      601 gtgctggaat atcttggtgt ttccgttgct ttaaatgaat ctggtttaga catagcccaa
      661 aaaaaggcca tttatacagc agatgttatt tatggaacgg cttctgaatt tggttttgat
      721 tacttacgcg acaatatggt acgccaaaaa gaagataaag tacaaagtgg acttgatttt
      781 gttttaatag atgaagcaga ttcaatttta atagatgaag cgagaacgcc cctactgatt
      841 tctgaccgta aagaagaaga tttgtccctt tatcatacag cgaataagct tgtgaagaag
      901 atgatgaaag atgattatga gatggaagaa cataaacgct ttgtttggtt gaatgatgct
      961 ggaattgaga aagcccagaa gttttggggt gtcgaatcac tttattccgc agaggcgcag
     1021 tcagaactta gaattacgat gcttttaatg cgagctcatt tcttgatgca taaagataaa
     1081 gattatgtgg tgcttgatga tgaagtatta attatcgatc cacatactgg tcgtgcgctt
     1141 ccaggccggc gctttaatga cggactccat caggcaatcg aagcaaaaga gggcgtggaa
     1201 gttaaagaag aatcacgtac gctagcaaca attacaattc aaaactactt ccggatgtat
     1261 aagaaaattt ctggaatgac aggaacggct aaaaccgaag aagaagaatt ccgtcaaatt
     1321 tataacatgg atgtcgtagt aatccccacc aatttacgtg taaatcggga agatatgcaa
     1381 gatgatattt tctatacgaa aaaggaaaaa ggtcgtgcga ttgtgtatga agtatcatgg
     1441 cgctatgaaa aaggacagcc aactttaata ggaacttctt ctattaaaag taatgaatgg
     1501 atcagtggct tattagacgc tgctggaatt ccccaccaag tattaaatgc gaaaaaccat
     1561 gcccaagaag cggaaataat tgccaaagct gggaaacgcg gaatggtaac tttagcaacg
     1621 aacatggctg gtcgggggac agatatcaag ctggatccag atgtacataa gcttggcgga
     1681 ctagctgtaa ttggaacgga gcgccatgag agccgtcgga tagatctaca gctaatggga
     1741 cgttctggac gacggggtga ccctggtttc agtaagttta tgatttcttt agaagatgat
     1801 ttattagaac aatttgaaag taagagctgg gagaaacttt ccacgaaact taaacgcaaa
     1861 gcaccacgtg atgggaaacc agttaattca aggaaaattc atgctgtcgt tgtggatgca
     1921 caaaaacgcc tagaaggagc aaactacgat attcgtaaag atttgctttc ctacgatgaa
     1981 gtaatcgatt tacaacgcaa aatggtatat aaagaacgcg atttattatt agaaagaaat
     2041 aaacttggag tctcttccga aaaaattcta cgtgaagttg ccgaatattc atttatccat
     2101 ccaagtgata ttccggaaga agagttagaa atttattatt cacgtcaaaa agaattgctc
     2161 ggcggcacga aattccctat ttcttttgat caagtaacgc tgatggatcc gagagaagtg
     2221 gtagaagaaa tcgtatcttg gcataaaaaa gaacgcaata aattcccagc tgagacgatt
     2281 gctgcaatag aacgagaagt ctatttgaat ttaatggacc aaatgtgggt tatgcatctg
     2341 gacgcaatgg tacaattacg cgaaggtatc cacttgcgag catatggaca acaagatcca
     2401 ttagttatgt accaaaaaga aggggctcaa ttatttgaga aattccaagc agactatcat
     2461 ttctactttg ctcacgcctt acttgaactt gatccagacg gcttaatcca aggctaaaat
     2521 acaacttgcg tctgattttt tccaaattta tgggtaattt aatgagaacg agggtattaa
     2581 tctatataat agtaccaaac gaaaataaat ttagacaaaa gagggtggta aagtgaaggg
     2641 gtcattcaca aagtttaaac aattttttat agaaaacaaa tttgtgttag ggttactaat
     2701 ttttctttta gtagcacttg atatttatgt attaactaag attgccttta tttttgatcc
     2761 gttaatggta attcttaaaa ccgttgctgc accaatcatt ttagctggga tatcttacta
     2821 tttatttaat cctatcattg attggttaga gaaacataag tggaagcgag gttgggcaat
     2881 tgcattacta tatttagtga ttatcggttt actcattcta ctatttagtt ttgtcattcc
     2941 agctgtgaaa gatcagattg ttagcttgtt caaatcattc ccggggtatt gggaccaaat
     3001 cacacagaaa tttgatgagt tcagtcgctc gagcttattt gatcaaataa aagataaatt
     3061 aaatacgaac atgagcgata tcatgaagac tctttccaca aaaggaacat ctgtaattaa
     3121 tagtgctatt tcaagtattg gtagtattgt tggaacggta acagaggttg ttttagcgat
     3181 tgtaactacg ccgcttgttt tattctactt gttaaaagat ggaaaaaaat taccagactt
     3241 cctactaaaa atgttaccag taaatggtcg tgcgcatact cgccaagtac ttggtgaagc
     3301 aaaccaccaa attagttcat atattcgtgg acaaattatt gtaagtttgt gtattggtat
     3361 tttgctattt atcggttatt taattatcgg tctaccatat gcattaacac ttgctattat
     3421 tgcagcttgt actagtattg ttccttattt aggaccagca attgcgatta caccagcgat
     3481 tattatcgcg attgttactt caccttggtt actaattaaa ttaatcatag tctggtgtgt
     3541 cgttcaatta cttgaaggta aattcatttc tcctcaagtc atgggtaaaa cactaaaagt
     3601 acatccaatc acgattttat tcgttatttt agtagctgga aatctattcg gtgtactggg
     3661 tgttatcttc gcagtaccag gttatgcggt acttaaagtc atcgtaacgc atgtatttat
     3721 ttggttcaaa cgaatctctg ggctttacgg ggaacaacct gaaagtgaat atgtagaatc
     3781 accaacagaa gaaaaagaat tataaaataa aaacactatt agttagaaaa t
//
LOCUS       DASDYK010000173         3755 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.173, whole genome shotgun sequence.
ACCESSION   DASDYK010000173 DASDYK010000000
VERSION     DASDYK010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3755
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.173"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..943
                     /locus_tag="U0308_002803"
     CDS             <1..943
                     /locus_tag="U0308_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2317755.1"
                     /translation="KEKIQKSTGTFVPDLPNGSFLKENGSMELLNDYFFKNKDIYISK
                     HNRFADYPYHTHQFLELNYMYSGSSEQVIEGNKETLHEGELLLLDSGCHHSIKATGEK
                     DILINILFRDQQISLEWLTSIKKKNSLLFDFLLHSSVSEQSLKKYIIFQSAQIPHIQQ
                     ILNQIITEYFLEEEFSSRIITLYLPILFTELVRKCDTYLADDLTNSQSSTTSTMLEVI
                     KLIESNYRTITLTSAADTLGYNKNYLSNFIKKNTNFTFTELVNKQKMLAANLLIETTS
                     TPIELIIEKVGFSNKTYFYSLYKKTFNLLPNEVRNKK"
     gene            complement(993..1454)
                     /locus_tag="U0308_002804"
     CDS             complement(993..1454)
                     /locus_tag="U0308_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HEM2317756.1"
                     /translation="MAIYKDSVHEMWEKYRTEYPMISSKFEAWAFGNSNQMANELGGL
                     VMDGIKTGTSSLFYWYDQGGETMPSVGSHVVLLDGNEEAMGIIKLTGVTIMPFNEVPE
                     TFAYLEGEGDRTLEYWREVHTSFFSNECVELGIPFEEDALVVCEEFEVVYK"
     gene            complement(1509..2129)
                     /locus_tag="U0308_002805"
     CDS             complement(1509..2129)
                     /locus_tag="U0308_002805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein jag"
                     /protein_id="HEM2317757.1"
                     /translation="MRDITAQGSNVEEAIQNALATLETTRDKVEVEVLDEGKKGIFGI
                     GSRLAMVKVIEKEDGIQVAIDYLLDVATKMGAVITIDVEEVGKDVKLQIKGDSLGMLI
                     GKHGQTLNALQYLTQLIANKTTSQYKNIIVNVGDYRERRHETLVILANKMADKALKTK
                     RAVHLEPMPSFERKIIHAILSENEQIETHSEGRDPYRYIVIKPVRK"
     gene            complement(2126..2989)
                     /gene="yidC"
                     /locus_tag="U0308_002806"
     CDS             complement(2126..2989)
                     /gene="yidC"
                     /locus_tag="U0308_002806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEM2317758.1"
                     /translation="MKKKKRFKQKLLIASLVIGLMAVLSGCGYSTDPITSESTGFWSH
                     YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIK
                     ELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE
                     IKTDSFLWMQLGNPDPYYILPVVAALTTFLSSKISMMGQTQQNKSMAMIVYIMPVMIL
                     FMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQVAEDRLKKKAANM
                     KASKKGGKKRK"
     gene            complement(3030..3389)
                     /gene="rnpA"
                     /locus_tag="U0308_002807"
     CDS             complement(3030..3389)
                     /gene="rnpA"
                     /locus_tag="U0308_002807"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEM2317759.1"
                     /translation="MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHFRIG
                     LSVSKKIGNAVCRNRIKRYIRQSFHELESQINPENEYIIIARKPAANMDFHEVKKSLI
                     HVLKVGRVLKQKPNNSK"
     gene            complement(3479..3613)
                     /gene="rpmH"
                     /locus_tag="U0308_002808"
     CDS             complement(3479..3613)
                     /gene="rpmH"
                     /locus_tag="U0308_002808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003397591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEM2317760.1"
                     /translation="MKRTYQPSKRKRKKVHGFRTRMSTKNGRRVLASRRRKGRKVLSA
                     "
BASE COUNT         1160 a          770 c          547 g         1278 t
ORIGIN      
        1 aaaagaaaaa atccaaaaaa gcactggcac ttttgttccc gatttaccca atggatcctt
       61 tttaaaagag aacggcagca tggaattatt aaatgattat ttcttcaaaa acaaagacat
      121 ttatataagc aaacacaacc gatttgcgga ctatccttat catacacacc aatttcttga
      181 gctaaattac atgtattcag gaagctccga acaagtcatt gaaggaaata aagaaacttt
      241 gcatgaagga gaacttttac ttttagacag tggctgccat cattccatca aagcaacagg
      301 cgaaaaagac attctcatca acatcctttt ccgtgaccaa caaatcagcc tagaatggct
      361 aacgagtata aagaaaaaaa acagccttct attcgacttt cttcttcatt ccagcgtaag
      421 cgagcaatct ttaaagaaat atattatttt tcaaagtgcg caaattccgc atatccaaca
      481 aattttaaac caaattatca cagaatattt tttagaagaa gaattttcat caagaattat
      541 cactctttat ttgccaattc tgttcactga actggtacgt aaatgtgata catatttagc
      601 tgatgatctt accaactcac aatcaagcac cacttccacc atgctcgaag ttattaagct
      661 tatagaatcc aactatcgga caatcacatt aacaagtgcc gcggatacat taggttacaa
      721 taaaaattac ctcagtaact ttattaaaaa aaataccaat ttcactttta ccgaactagt
      781 caataaacaa aaaatgctcg cagcaaatct tttaatcgaa accacttcca ctccaattga
      841 gttgattatt gaaaaagttg gctttagtaa caagacttac ttctactcct tatacaaaaa
      901 aacattcaat ctcttaccca atgaagtaag aaataaaaaa taagagtact gcattaatcg
      961 cagtactctt ctattgtttc acgtgaaaca ttctatttat aaacaacctc aaactcttca
     1021 caaaccacta gagcatcttc ttcaaatgga ataccgagtt ccacacattc attactgaaa
     1081 aaggatgtat gtacttctcg ccaatattct agcgttctgt caccttctcc ttccaaataa
     1141 gcaaacgttt caggtacttc attaaaaggc ataatagtta cacctgttaa cttgataatc
     1201 cccattgctt cttcattacc atctaaaagc actacatgag aaccaacaga cggcatcgtt
     1261 tctccgcctt gatcatacca ataaaacaag ctgctcgtgc cggtttttat cccatccata
     1321 acaagcccac caagctcatt cgccatctga ttagagttac caaatgccca tgcctcaaac
     1381 ttacttgaaa tcatcgggta ttctgtccgg tatttctccc acatttcatg cactgaatcc
     1441 ttataaatcg ccatttaagt atcctcctaa aaaaagactg aggttcgtta aaacctcagt
     1501 ctaagaattt atttgcgaac tggcttaatc acaatataac ggtaaggatc gcgtccttca
     1561 gaatgcgttt caatttgttc attctcgctt aaaatagcat gaataatttt tctttcaaat
     1621 gaaggcattg gttctaaatg aacagcgcgc ttcgttttaa gagctttatc tgccatttta
     1681 tttgctaaaa ttactaacgt ttcatgacgt ctttcacgat aatcccctac attaacaata
     1741 atatttttgt attggctcgt tgttttatta gcaattaatt gtgttaagta ttgaagtgca
     1801 ttaagggttt gaccgtgttt gccaattagc atacctagac tgtcaccttt aatttgcaac
     1861 ttcacatctt taccaacttc ttctacatcg attgtgatta ctgcacccat cttggtagca
     1921 acatctaaaa gataatcaat cgctacttgg ataccatctt ctttttcaat tacttttacc
     1981 atagccagtc ttgaaccaat tccgaaaata ccttttttac cttcatctag aacttctact
     2041 tcgaccttgt cgcgtgttgt ttctaaagtg gctaatgcat tttggatagc ttcttcaacg
     2101 tttgagcctt gcgcagttat atctctcact ttcttttctt acctcctttt ttggaagcct
     2161 tcatgttagc tgcttttttc ttcaaacgat cttccgcaac ttgagcagca gcaagcgcct
     2221 cctgttcgcg tttgttttta aaaggattat taattaaaag tgtttggaat acggtgaaaa
     2281 tgttaccgat aatccagtat agagcaaggg cagacggtag tgtaataccc ataaatagaa
     2341 tcattacagg catgatataa acaatcattg ccattgattt attttgctgt gtttgcccca
     2401 tcatagaaat ttttgatgac aagaatgttg ttaatgccgc aacaaccggt aagatgtaat
     2461 atggatctgg atttcccagt tgcatccata agaatgaatc tgttttgatt tctgctgttc
     2521 tactaatcgc ttggtaaaaa cctagtagaa taggcatttg gattaataat ggtaaacaac
     2581 ccatcattgg atttacgcta ttttcttgat atagacgcat tgtttcttgt tgtagttttt
     2641 gttttgtttc attatcttta gacgagtatt tctcttgtag ttctttgatt ttcggttgta
     2701 aattggtcat ggccttttgg cttttcagct gtttgatcat taaaggcatg ataagtagac
     2761 ggattaaaat ggtaacaaca ataattccga ctgcgtaact tcccccgaat aaatcggaaa
     2821 accaagtaat agtccaggac aatggaaata caatatagtg actccaaaat ccagttgatt
     2881 ctgatgtaat tggatcagtt gaatagccac aacccgaaag tacagccatt aatccgatta
     2941 caagacttgc gatgagcaac ttctgtttga atcgcttttt cttcttcaaa ttgatgtaac
     3001 ctccaatttc gcctttttaa aatttccact cactttgaat tgtttggttt ttgctttaaa
     3061 acacgcccca cttttaaaac atgaatcaaa cttttcttta cctcatgaaa atccatattg
     3121 gccgccggtt ttctggcgat gataatatat tcattttcag gattgatttg gctttctaat
     3181 tcatggaatg attgtcttat gtaacgttta attcgatttc gacagacagc gtttccaatt
     3241 tttttactaa ctgataaacc aattcgaaaa tgattcgatc cttcttgctt taaagtataa
     3301 acaacaaatt gacggttagc aaaagatttt cctcttcgga atactttttg aaaatcgtca
     3361 ttttttttaa ttctatattt ttttttcata cattctccat cttcttacat atcttagtat
     3421 aaggccgttt gcctcagcga tttttcaaaa aaaaaaccac tgagtcgttt tcagtggtct
     3481 acgcagataa aacttttctt cctttacgac gacgacttgc taaaactcta cgtccgtttt
     3541 tagtactcat acgcgtacgg aaaccatgca ctttttttct tttacgttta cttggttgat
     3601 atgttctttt cattaattac acctcccatg aaagggtcca atcgaattta tctattagac
     3661 agtcttagat attgtacgtg aactggtctt ttttgtcaat actatttaga cgaatttcta
     3721 tttagactcc gttcactatc atatcatatt tttat
//
LOCUS       DASDYK010000174         3749 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.174, whole genome shotgun sequence.
ACCESSION   DASDYK010000174 DASDYK010000000
VERSION     DASDYK010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3749
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.174"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            192..893
                     /locus_tag="U0308_002809"
     CDS             192..893
                     /locus_tag="U0308_002809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEM2317761.1"
                     /translation="MTKEKVLWGYDEKTGPEMWGHICSDFEIAHTGKAQSPVDIEQAD
                     VVKLKPSTMKFYYKETDYTIRRIEQSVHVFPHDKEQGLRFNGEYYPLVSFHAHIPAEH
                     LLDGYVYPIEWHFVHEKPDGTTLVMSAWMEIDNTNNVEFKDLPTYFPEVFADFETERE
                     ITLDVNEFMPEERVFYTYQGSRTTPPTVEGVTWIVLKNAKTLGQEDFTEFEKAIGNTS
                     RPVQDLNGREITFYN"
     gene            961..1503
                     /locus_tag="U0308_002810"
     CDS             961..1503
                     /locus_tag="U0308_002810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012985137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEM2317762.1"
                     /translation="MYEKARQMMIEAHSGQVRKITGEPYFSHPLNVARILRRAGFREE
                     VVVAGLLHDAVEDTEMTDADIRATFGDEVADLVASHTENKTLSWEERKAHTIEQVRTG
                     SLEEKALIVADKLDNLTSVKYALSSEGKSVWSYFKRGYDLQKWYNQGIKNNMEYGLNP
                     SEIPPFFGEYARLVKWIFKK"
     gene            1639..2511
                     /locus_tag="U0308_002811"
     CDS             1639..2511
                     /locus_tag="U0308_002811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM2317763.1"
                     /translation="MVYGAIEAGGTKFVVAIGEKSGKIIKRESYPTTEPAETMKAVIQ
                     FFKQYEDELKAIGIGSFGPIDIRKSSATYGYITQTPKLAWRNYDIVGAMKKEFNVPIG
                     FTTDVNAAALGEVSLGAAAGLDSCIYLTIGTGIGGGAVVSGKILEGFSHPEMGHIMVR
                     RHKRDRFTGSCPSHSDCLEGLAAGGAIEKRWGQKAAELADNEEVWNLEAHYIAQALMN
                     YTLILSPERIVLGGGVMKQRQLFPLVRQKLKALVNNYVQLPDLDEYIVPPKLEDDAGI
                     TGCVLLAVDAEESN"
     gene            2596..3525
                     /locus_tag="U0308_002812"
     CDS             2596..3525
                     /locus_tag="U0308_002812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015454391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEM2317764.1"
                     /translation="MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGM
                     TADMLREEIKKTKALTDKPFGVNLMLMMTNIAELTEVIIEEKVGIVTTGAGTPKTFMP
                     IWKEAGIIVISVVPSVMIAKRMEKMGADAVIAEGTEAGGHVGETTTMALLPQIVDAVT
                     IPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMV
                     TGRKAGAPVRSIKNKMIKEYIRLEEENADRDTLEELTLGSLRKAVQEGDTDNGSVMAG
                     QIAGLITEIKPCKDVIEEMMTDAKNVIAGLELN"
BASE COUNT         1246 a          647 c          844 g         1012 t
ORIGIN      
        1 tattgagaat tataagaatg aaaagtaaag acgtttttat ataaaagatg taccggaaat
       61 aaagccacca gtatcttcac gtgagttcac accaaagtca aaacacgaac attaagcata
      121 taacttgtgg aatagatcag ctatccgcta aaataatgtt acgcaatttt tttcgaaaag
      181 gagaaatggt tatgactaag gagaaagtgt tatggggtta cgatgaaaag actgggccag
      241 aaatgtgggg gcatatctgc tctgactttg aaatcgcaca tactggaaag gcacaatcgc
      301 cagtagatat tgaacaagct gacgttgtga aattaaaacc atcaacaatg aaattttact
      361 ataaagaaac agactatacg attagaagaa ttgaacaatc ggtgcatgtt tttccgcatg
      421 acaaagaaca agggttacgc tttaacggcg agtattatcc gcttgtatcg ttccatgcac
      481 atattccggc ggagcatttg cttgacggtt atgtatatcc gattgaatgg cattttgttc
      541 atgaaaaacc agacggcaca acgcttgtaa tgagtgcttg gatggaaatt gataatacaa
      601 ataatgtcga attcaaagat ttaccaacct atttcccaga agtgttcgct gattttgaaa
      661 cagaacggga aattacttta gacgtgaatg aatttatgcc agaagaacgt gttttctata
      721 cgtaccaagg ttcacggaca acaccaccaa ccgtggaagg cgtaacttgg atcgtgttaa
      781 aaaatgcgaa gacacttggc caagaagatt tcactgaatt tgaaaaagca attggtaata
      841 caagtcgacc agtgcaagat ttaaatggtc gtgaaattac tttttacaat taaaaaacta
      901 gaaagcctcg ctcgaatctt gtatagtata gacatagatt ctgagtggag gcttcttttt
      961 atgtatgaaa aagcgagaca gatgatgatt gaagcgcata gtggccaagt tcgcaaaatt
     1021 actggcgagc cttatttttc gcaccctttg aacgtagcga gaattttgcg ccgcgctggt
     1081 tttcgcgaag aagttgttgt cgcgggatta ctgcacgatg ccgttgagga tacggaaatg
     1141 accgatgccg atattcgcgc aacatttggt gatgaagtag ctgatttagt agcgtctcat
     1201 acagaaaata aaacgttatc ttgggaagaa cgaaaagccc atacgattga acaagtccgc
     1261 actggcagcc tagaagaaaa agcattaatc gtggcggata agctagacaa tttaacctcc
     1321 gtcaaatatg ccttaagctc agaaggaaag tctgtctgga gctattttaa acgcggctat
     1381 gatctgcaaa aatggtacaa ccaagggatt aaaaataata tggaatacgg attaaatcca
     1441 tctgaaatcc ctccattttt tggtgaatat gcgcgacttg tgaagtggat ttttaagaag
     1501 taaattttgt atttaaatat ctgttaaatt aggtatttag aattaaaatt ataagttttt
     1561 agaaaataag tttctttttc cagaaatcta ttgtaaaatg aaagcgttat aaaacttacg
     1621 agaagggaag ttttttgaat ggtttatgga gcaattgaag caggcggaac taagtttgtt
     1681 gtagcaatcg gagaaaagtc agggaaaatt attaagcgcg agagctaccc gacaacggag
     1741 ccagcagaaa caatgaaagc agtcattcaa ttttttaaac agtatgagga tgaattaaaa
     1801 gcaattggga ttggctcatt tggaccgatt gatattcgga aatcaagtgc tacatacggt
     1861 tatatcacgc aaacaccaaa acttgcatgg cgcaattatg atatcgttgg tgcaatgaaa
     1921 aaagaattta atgtacctat tggttttacg acggatgtta atgcagccgc tttaggagag
     1981 gtaagtttag gcgcggcagc aggtttggat agttgtattt atttaacgat cggaacagga
     2041 atcggtggtg gagcagttgt ttcaggcaaa attcttgaag gcttctccca cccagaaatg
     2101 ggacatatta tggtgcgccg acataagcgc gatcgtttta caggcagctg cccgagtcat
     2161 agcgactgtt tagaggggct tgcagcaggt ggagcaattg aaaaacgttg gggtcaaaaa
     2221 gcagcagaac ttgcggataa tgaagaagtg tggaatttag aagcgcatta tatcgctcaa
     2281 gctttaatga attatacact tatcttatcc ccagaaagaa tcgtgttagg tggaggcgtc
     2341 atgaaacaac gccaactttt cccacttgtt cgtcaaaaat tgaaggcact cgttaataat
     2401 tatgtgcaat tgccggattt agatgaatat atcgttcctc caaagttaga agatgacgct
     2461 ggaattacag gctgtgtctt gctcgctgtg gatgctgaag agtccaatta atggcgaaaa
     2521 acagctctag tttatagggc tgttttttga tatactaaat tgtgataaaa caaacaagaa
     2581 cgcaggagga aaaagatgtc cattacgaac ttattaaata ttaaatatcc aattatccaa
     2641 ggtgcgatgg ctcaaattgc caaagctcca cttgtagccg ctgtatctaa tgcaggcggt
     2701 ttaggaatta tcgcttctgg cggaatgact gccgacatgc tacgcgaaga aatcaaaaaa
     2761 acaaaagcac tgacagataa accatttggc gtcaacttaa tgctaatgat gaccaatatt
     2821 gccgaattaa ccgaagtaat tattgaagaa aaagtgggaa tcgttacaac tggagcggga
     2881 acgccaaaaa cgttcatgcc aatttggaaa gaagctggaa ttattgtgat ttccgttgtc
     2941 ccatccgtga tgattgctaa acgtatggaa aaaatgggcg cagatgcagt tatcgcagaa
     3001 ggaacagaag caggcggaca cgtcggcgaa acaacaacaa tggcactttt acctcaaatc
     3061 gtggatgccg ttactatccc agtcattggc gcaggtggaa ttgcagatgg tcgcggaatc
     3121 gtcgcagcgc ttgctctagg tgcaaaaggt gtccaaatcg gaacacgctt cctagcaacc
     3181 gacgaatgcc cagtacaccc ggactttaaa gcagccgtga ttaaagcttc cgaccgcgac
     3241 acaatggtta ccggaagaaa agccggtgcc cctgttcgct cgattaaaaa caaaatgatt
     3301 aaagaataca tccgtttaga agaagaaaac gccgatcgcg acacgttaga agagctaact
     3361 ttaggttctt tacgaaaagc agtacaagaa ggcgacacag acaacggctc tgtcatggcc
     3421 ggtcaaatcg ctggcttaat tacagaaatc aaaccttgta aagatgttat tgaagagatg
     3481 atgacagatg ctaagaatgt gattgcaggg ttagagttaa attaatgttt taaactgctt
     3541 tcttttgaag cgtttgagta aaatagcttt gataaattcc ttaatatatt atttggattt
     3601 ttagtaagtt ataaaaagcc gtgccagttc acttagtgct gatacggctt ttttagttag
     3661 tagaaaaatt catttctgtt tcatcaatac atcctctatg ttatactaat gcaaagttat
     3721 attattgcaa atgcaacaaa aggaggttg
//
LOCUS       DASDYK010000175         3749 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.175, whole genome shotgun sequence.
ACCESSION   DASDYK010000175 DASDYK010000000
VERSION     DASDYK010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3749
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.175"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..3654
                     /locus_tag="U0308_002813"
     CDS             <1..3654
                     /locus_tag="U0308_002813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2317765.1"
                     /translation="LEELQVSGGTIEEIPATITNMASHLKFLGILNNHLVKVPDAIFT
                     TNWTNATGGDLDLMAAGNQIVTNIPANYISQFNNGDNLLEFYDNNYQKQDQLTTTPGY
                     TIDVPVGTDFNQLTPDKTKLALTSGRTLLAQHEFEYYDDGSSSLIHNGVAAAPGQATI
                     FIKSKFSTQSNKFARTQVTVNITALNGGPITVKHEDTKGQELAPPVILNGKDGDPYTT
                     TQKTFPGYTLVATPANQNGTFTMNPATVNYVYSANDYKLTSTFKDAQGQELKAPVVDT
                     KDYHIQDNYTTTAATIPGYSLVATPANQNGTFGAGNVTVNYVYKKDDYTLTSTYKDTN
                     GQELKAPVVDATTYHYQDTYTTTAAVFPGYTLVATPTNATGTFGSSNITVHYVYQANG
                     YQLTSTFKDQQGKTIAPDDVDTKTYHVNDPYTTTAKTIPGYTLVTTPTNNQGNFGTSD
                     ITVDYVYKAEDYTLTSTYKDAQGKELKQPVVDSKKYHIQDNYSTSAATIPGYTLVSTP
                     ANETGTFHTSDVTVNYVYKLTDLKLTSTYKDAQGTELKPPVVDSKTYHIQDNYATTAA
                     VIPGYTLVATPANQSGTFGSTDIQVNYVYQAVAYKLTSTYKDQQGNDLALPKVDSKTY
                     HIQDGYTTSDIAIPGYTLVAAPTNQTGTFGASDVTVNYVYKANDYTLTSTYKDAQGKE
                     LKTPVIDSQKYHINDTYTTTGATIPGYTLVAAPANQSGTFGAANVTVNYVYKADDYTL
                     TSTYKDANGKELKAPVVDSKTYHTKDNYSTSAATIPGYTLVAAPTNQTGTFNTSNVTV
                     NYVYKANEYTLTSTFKNVQGTELKPAIVKKGFIIKDGYATSGVTIPGYTLVATPSNKK
                     GTFGASNVTVNYVYKANGYALITTYKDTQGKDLKPLAIDTKTYNINDPYTATALNISG
                     YTLTTTPANEKGVFGASDETVNYVYKANDYTLTTTYKDANGKELQAPKVDAKTYHIQD
                     TYKTTAAIIPGYTLVATPKNDQGTFGASNVTVNYVYQTNDYTLTSTFKDAQGNELKAA
                     EIDVQKYHIHDTYTSKAAVIPGYSLEKTPTNETGTFNASDIQVNYVYKANDYQLTSTF
                     KDQQGNEIALPTVDAKTYHIHDAYTTKAHLIPGYSLVAAPKNQIGAFGTSDVTVNYVY
                     KKDAIIKPITPAKPTILTIKTPASKVVKTKVVKQTLPKTGDDDAGLLNLLRLIGLVLI
                     LGVFLAVGSKKLR"
BASE COUNT         1417 a          774 c          655 g          903 t
ORIGIN      
        1 ttagaagaat tacaagtttc tgggggaaca atagaagaaa tccctgccac aataacaaat
       61 atggcgagtc atttgaaatt cttagggata ttaaataacc atttagtgaa ggttccagac
      121 gcaattttca ctacgaactg gacaaatgct actgggggag acttagactt aatggctgca
      181 gggaaccaga ttgtaaccaa tattcctgct aactatataa gccagtttaa taatggggat
      241 aacctattag aattttacga taacaactat caaaaacaag accaactaac tacaacacct
      301 ggatatacca ttgatgtacc tgttggaact gattttaatc aattaacacc agacaaaacg
      361 aaactcgcac taacatctgg acgaacttta ctcgcgcaac acgaattcga gtattatgat
      421 gatggttcaa gttcactaat ccacaatggc gtagcagcag caccgggtca agcgaccatt
      481 ttcatcaaga gcaagttttc cacgcaatcg aacaaatttg ccagaacaca agttacagta
      541 aacatcactg cgctaaacgg cggacctatt acagtgaaac atgaagatac aaaaggacaa
      601 gaacttgcgc cacctgtcat tttaaatggt aaagacgggg acccttatac aacgacacaa
      661 aaaactttcc caggctatac tttagttgca acaccagcca atcaaaatgg tacattcacc
      721 atgaacccgg ctacagtcaa ctatgtatac agcgcaaatg attataaact aacatctact
      781 ttcaaagatg cccaaggtca agaactgaaa gcgccagttg tggatacaaa agattaccat
      841 atccaagaca actatactac aacagcagca accattccgg gctattcttt agttgcaaca
      901 cctgctaatc agaacggaac ttttggagct gggaatgtta ccgttaatta tgtatacaaa
      961 aaagacgatt atacgctcac ttccacttac aaagatacga acggtcagga actaaaagca
     1021 ccagtggtag atgcgacaac gtatcattat caagacacgt atacaacaac agccgcagtt
     1081 ttcccaggtt atacgttagt agcaacacca accaacgcta ctgggacatt tggttcgtca
     1141 aacatcactg ttcattacgt atatcaagca aatggctatc aattaacttc tacatttaaa
     1201 gatcaacaag ggaagacaat cgcaccagat gatgtcgata ctaaaaccta tcacgtgaac
     1261 gatccctata caacaactgc caaaacgatc ccgggctaca cattagtgac gacccctaca
     1321 aacaaccaag gtaattttgg aacaagcgat attacggttg attacgttta taaagcagaa
     1381 gattatacat taacttcgac gtacaaagat gcgcaaggta aagaattaaa acaacccgtt
     1441 gtagatagta aaaaatatca tattcaagac aactattcta caagtgcagc aaccattccg
     1501 ggttatacgc tagtatcgac acctgcgaac gaaacaggaa ccttccatac gagcgatgtc
     1561 acggttaatt atgtgtataa attaacagac ttaaaattaa cttcgacata taaagatgcg
     1621 caaggaacgg agttaaaacc acccgttgta gatagtaaaa cgtatcatat tcaagataac
     1681 tatgctacaa ctgcagctgt cattcctggc tatacattag tcgcaacacc agcgaaccaa
     1741 tcaggtactt ttggtagcac ggatatccaa gtgaactatg tgtatcaagc agttgcttat
     1801 aaactaactt cgacgtataa agatcaacaa gggaatgatt tagctttacc aaaagtagat
     1861 tcgaaaacgt accatattca ggatggttac acgacgagtg atattgctat tccaggttat
     1921 acattagtcg cggctccaac gaatcaaaca ggtacatttg gcgcgagtga tgtaaccgtg
     1981 aattatgtct acaaagccaa tgactacaca ctaacttcaa catataaaga tgcgcaaggt
     2041 aaggaattaa aaacgccagt catagacagt caaaaatatc acattaacga cacttatact
     2101 acgacaggag ctactattcc aggttataca ttagtcgcag caccagcgaa tcaatcaggt
     2161 acatttggcg cggcgaatgt aacagtcaac tatgtataca aagcagatga ttacacatta
     2221 acttcgacct acaaagatgc aaacggcaaa gaattaaaag cgccagttgt agacagcaaa
     2281 acttaccata caaaagataa ctattctact agcgcagcaa ccattccagg ctacacatta
     2341 gtggcagcac caacaaatca aacaggtaca tttaatacga gcaatgtgac agtcaattat
     2401 gtttacaaag cgaatgaata taccttaact tccactttca aaaatgtaca aggaacagaa
     2461 ctaaaaccag ctatcgtgaa aaaaggattt attattaagg atggctatgc gactagcggc
     2521 gtaacaattc cgggctatac attagtggca acaccatcga acaaaaaagg aacatttggt
     2581 gctagtaatg taacagttaa ttatgtatat aaagcgaatg gttatgcatt aatcacaaca
     2641 tataaagaca cacaaggtaa agacttaaaa ccactagcca ttgatacaaa aacatacaat
     2701 attaacgacc catacactgc aacggcgcta aacatttcag gttacacatt aacaactaca
     2761 ccagccaatg aaaaaggtgt atttggcgca agtgatgaaa cagttaatta cgtatataaa
     2821 gcaaatgatt atacgttaac aactacctac aaagacgcaa acggcaaaga actacaagca
     2881 cctaaagtag acgcgaaaac ttatcatatc caagacacat acaaaacaac tgcagcaatc
     2941 attcctgggt atacattagt ggcaacacct aagaatgacc aaggtacttt tggagcgagc
     3001 aatgtaactg tgaattacgt gtaccaaaca aatgattaca cgctaacttc gacatttaaa
     3061 gatgctcaag gaaacgaatt aaaagcagca gaaatagacg tacaaaaata ccatattcat
     3121 gacacttaca catctaaagc agccgtgatt ccgggttaca gtttagaaaa aacaccaacg
     3181 aacgaaacgg gtacttttaa tgcaagtgat attcaagtaa attatgtgta taaagcaaat
     3241 gattatcaac ttacttctac ttttaaagat caacaaggca acgaaatagc attaccaaca
     3301 gttgatgcaa aaacttatca cattcatgac gcttatacaa cgaaagctca cttgattcca
     3361 ggatatagcc tagtagctgc accaaagaac caaataggtg cttttggaac aagtgacgta
     3421 acagtcaatt atgtgtataa aaaagatgct attatcaaac ctattactcc agcgaaacca
     3481 actattctta caataaaaac acctgcaagc aaagtagtta agactaaagt agttaagcaa
     3541 actcttccta aaacagggga tgacgatgcc ggactattaa acctgctaag acttatagga
     3601 ctcgttttaa ttttaggcgt atttttggca gtcggaagta aaaaattaag ataagtataa
     3661 cgtagattaa aacaccgccg cagattgttg tggtggtgtt ttaactaata tatccgacat
     3721 tagaaatacc cattttggaa aagatgtat
//
LOCUS       DASDYK010000176         3727 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.176, whole genome shotgun sequence.
ACCESSION   DASDYK010000176 DASDYK010000000
VERSION     DASDYK010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3727
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.176"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..642
                     /locus_tag="U0308_002814"
     CDS             <1..642
                     /locus_tag="U0308_002814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2317766.1"
                     /translation="GILVPKRNPENGYYYFEETDIYRLYQIILFRKIGFSIQEIKESL
                     LGEKVTPMLEQAEQDLQQKIEELVGIQKTIQKIIHSQKEMRLNEITFVAKDNRYFKKV
                     PNQIIDHNTINYSQAAKHNLPDLEEPFYIFSKQDTGAICLKTIKKRSDYTFPAGEYAC
                     KSFIAKDEATVEAQIQLFLEELKHPTTSIILYENIYPSLAYPDAMVYTMEVPL"
     gene            639..1232
                     /locus_tag="U0308_002815"
     CDS             639..1232
                     /locus_tag="U0308_002815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2317767.1"
                     /translation="MTLSIESIDSFEKDCIIEEIASLVFAGFKSKFTKMLYKETEAHD
                     IIYAFCHYIYTEKGENLLIAIQDELVCGCMFVTGKSDSHQKLYQNLRKFLPFSQCLKL
                     IFLLSLLSHKPVQNERYIDFITVSPNFRGQGIGKTLISHCLETFHDEKITLYVAKNNN
                     RAYKLYRNLGFQVIQKENSTLMGVLTGIKEWQKMEWI"
     gene            1208..2230
                     /locus_tag="U0308_002816"
     CDS             1208..2230
                     /locus_tag="U0308_002816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2317768.1"
                     /translation="MAKNGVDIMKRWKKITIVLSAIIVILVAILFIGNNFEMNETRVT
                     IPTTGGRLSAVVTTPKHEKPKGIIVFVHGDGAQEATQNGSYRPLMERFAKQGYISVSW
                     DKLGVGNSSGNWLNQSMEDRANEVNQVIEWMKVKYPDSTTKIGLWGASQAGWVIPKAM
                     NANNEIAFSILAAPAINWMRQGEYNTGWQAKDAGKTTKEVKQAQQNFLTDSALISKNK
                     TYESYKQNGGKEKMTPDRYNFIRKNMNQDATLDLSKVKAKIYLVLAEKDKNVDSAETK
                     DVYTQQIKKENLETKTVPNVSHQMINPAIANSELLIHIVGLMVPKYFLVDDAYLDYCE
                     QVFSKQ"
     gene            complement(2244..2699)
                     /locus_tag="U0308_002817"
     CDS             complement(2244..2699)
                     /locus_tag="U0308_002817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MepB family protein"
                     /protein_id="HEM2317769.1"
                     /translation="MEYEQLLQSELGELEIIREELQNKEYRGMIVKTAKDGTMTRTRL
                     AKKTDKKAGYFVAFWEKDEFGKNCPFDENDSADFLCIVVIDDDLNGIFVFPRQCLIEK
                     GILTSEAGIGKMAARFYPTWCQDLNKTARKTQAWQQAYFKNYSIRKEDH"
     gene            complement(2699..3142)
                     /locus_tag="U0308_002818"
     CDS             complement(2699..3142)
                     /locus_tag="U0308_002818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2317770.1"
                     /translation="MILINKRAEKLDYQTILAIWEKSVIATHDFLAAEDRQFYKEQIP
                     LFLDNVELFLWFAGEEVVGFSGTSERELDMLFLEPIATGNGYGSQILSWLIENKQINL
                     VDVNEQNENATRFYLKHGFVVSSRSDADGFGKPYPILHLQLKGES"
     gene            complement(3160..3498)
                     /locus_tag="U0308_002819"
     CDS             complement(3160..3498)
                     /locus_tag="U0308_002819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317771.1"
                     /translation="MNEFPVVFEPEFMTIYLLVIISIFSTTLALSLEKYKFTIAGKAL
                     IGMCFISLFVLFVYIWVGGISSETNELIMSPIGILSVLLFTTHPYIFLILAILLGGEK
                     KPPHVPKPKK"
BASE COUNT         1304 a          765 c          575 g         1083 t
ORIGIN      
        1 ggtattctag ttcctaaaag aaatcctgaa aatggctatt attattttga agaaacggat
       61 atttaccgtt tatatcaaat tattcttttt agaaaaattg gcttttctat tcaagaaatc
      121 aaagaaagtt tgcttggtga aaaagtgact cccatgttag agcaggctga acaagatttg
      181 caacaaaaaa tagaagagtt agtaggaatt cagaaaacga ttcaaaaaat catccattcg
      241 caaaaagaaa tgcgtttaaa tgaaatcact tttgtagcta aagacaatcg ttattttaaa
      301 aaagttccta accaaataat tgatcataac actatcaact actcccaagc tgcaaaacac
      361 aatttaccag atttagagga acctttttac attttctcca aacaagacac tggagcaatc
      421 tgccttaaaa ccattaaaaa aagaagtgat tatacttttc cagctggcga atatgcttgt
      481 aaatctttta ttgccaaaga tgaagcaact gttgaagcgc aaatccaact atttttagaa
      541 gaattaaaac atccaacaac aagcataatt ttatacgaaa acatctaccc ttcactcgcc
      601 tatccggacg caatggttta cacaatggaa gtgccattat gacactttcc attgaaagca
      661 tcgattcatt tgaaaaagat tgcatcattg aagaaatagc gtctttagtt ttcgcagggt
      721 tcaaatcaaa gttcacaaaa atgctataca aagaaacaga agcacatgac attatatatg
      781 ctttttgcca ttacatttat acagaaaaag gcgaaaacct actaattgca atacaagatg
      841 agctagtttg cggttgcatg tttgtaacgg gcaagagtga ctcacatcaa aagctatatc
      901 aaaacctaag aaaattttta ccattttcac agtgcctcaa attaattttc ttactcagtc
      961 ttctatcaca caaacctgtt caaaatgaac gatatattga ctttataacc gtttcgccaa
     1021 attttcgtgg tcaaggtatt ggaaaaacgc taatttctca ttgcctagaa acctttcatg
     1081 atgaaaagat tactctatac gttgccaaga acaataatcg tgcctacaag ctgtatagaa
     1141 atttaggctt ccaagtgatt caaaaagaaa atagcacatt gatgggagta ctcaccggta
     1201 tcaaagaatg gcaaaaaatg gagtggatat aatgaaacgt tggaaaaaaa taactatcgt
     1261 attgagcgca atcatcgtca tattagtggc gattcttttc atcggaaaca atttcgaaat
     1321 gaacgaaaca agagtcacaa tcccaactac tggtggaaga ctttctgcgg tcgtgacaac
     1381 tccaaaacac gagaaaccaa aaggcattat tgtgtttgtt catggtgacg gggcacaaga
     1441 agcaactcaa aacggtagct atagaccgct aatggaacgc tttgccaaac aaggatatat
     1501 atctgtttct tgggataaat taggcgttgg taactcctca ggcaattggc taaatcagtc
     1561 catggaagac cgcgcaaacg aagtcaacca agttattgag tggatgaaag tgaagtatcc
     1621 tgatagcacc accaaaatcg gcttatgggg cgctagtcaa gccggctggg tgatcccaaa
     1681 agcaatgaat gcaaataatg agattgcttt ctcaatcctt gccgcccctg ctatcaactg
     1741 gatgcgacaa ggagaatata acaccggctg gcaagcgaaa gacgctggta aaacaacgaa
     1801 agaagtcaag caagcacaac aaaatttcct caccgacagc gcccttattt ctaaaaacaa
     1861 aacctacgaa agctacaaac aaaatggcgg taaagaaaaa atgaccccag atcgctacaa
     1921 ctttatccgc aaaaacatga accaagatgc caccctagac ctttcaaaag taaaagcaaa
     1981 aatctacctc gtcttagctg aaaaagataa aaatgttgat tcagcagaaa caaaagatgt
     2041 ttacacccaa caaattaaaa aagaaaacct agaaaccaaa accgtcccaa atgtctcgca
     2101 tcaaatgatt aatcctgcca tcgctaattc agagctactc atccatattg ttggcttaat
     2161 ggttccaaaa tattttctag tagacgatgc ttacttagat tactgcgagc aagtattttc
     2221 taaacaataa aaagaagacc caattaatgg tcttcttttc ttatagaata atttttaaaa
     2281 tacgcctgtt gccaagcttg cgtttttctc gctgttttat ttaaatcctg acaccacgtt
     2341 ggataaaatc tagcagccat ttttccaata ccagcttcac tagttaaaat tcccttttca
     2401 attaaacact gccttggaaa aacaaatata ccgttcaaat catcatcaat aacaacaata
     2461 cataaaaaat cagcgctatc attctcatca aaaggacaat tcttaccaaa ttcatctttc
     2521 tcccaaaaag caacaaagta ccctgccttt ttatccgttt tcttcgccaa acgcgtacga
     2581 gtcattgtcc catctttagc cgtttttaca atcattcctc gatattcttt gttttgtagt
     2641 tcttcccgaa ttatttcaag ttcaccaagt tcgctttgta acagctgttc atactccatt
     2701 aactctctcc cttcagttgc aaatgaagaa ttggataagg cttcccaaaa ccgtccgcgt
     2761 cacttctaga agaaaccaca aatccatgct tcaaataaaa tctcgtggca ttttcatttt
     2821 gttcattcac atccaccaaa tttatctgct tattttctat tagccaacta agaatttgac
     2881 tcccataacc attacccgta gctatcggct ctaaaaacaa catatctagt tcccgctcgc
     2941 tcgtcccact aaaaccaaca acctcttcac cagcgaacca taagaacagt tccacattat
     3001 ctagaaacaa aggaatttgt tctttgtaaa actgcctatc ttccgcagct aaaaaatcat
     3061 gcgttgcaat aactgacttt tcccaaatcg ctaaaattgt ctggtaatct agtttttccg
     3121 ctcgtttatt tataagtatc atatttttca acttcctatt tattttttag gtttgggcac
     3181 atgtggcggt ttcttttccc cgccgagcaa gattgcaagt attaagaaaa tatatggatg
     3241 tgtagtaaag agcaatacac tgagaatccc aatagggctc atgattaatt cgtttgtttc
     3301 tgaagaaatc ccccccaccc atatataaac aaataatacg aacagggata taaagcacat
     3361 cccaatcaac gctttccccg ctatagtaaa cttatatttt tcaagcgata aagccagtgt
     3421 tgtagaaaat atactgatga taacaagtaa ataaattgtc ataaactctg gttcaaatac
     3481 aactggaaat tcgttcataa agttacgctc ctttaaaatt attgtgctgg attacactgc
     3541 tgtttatacg ttgttgttct aaatacaaaa atcccttgat gttttttgaa ttattaaagg
     3601 ttaaaagcat aaacacaaag aaagtgaaat caattttacc cttttgtgta tgattgattt
     3661 tcttttctcc tctcgtattt gaatctccca tgttttcata gtacattatt atttgtgaaa
     3721 taaaaag
//
LOCUS       DASDYK010000177         3677 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.177, whole genome shotgun sequence.
ACCESSION   DASDYK010000177 DASDYK010000000
VERSION     DASDYK010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.177"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            132..953
                     /locus_tag="U0308_002820"
     CDS             132..953
                     /locus_tag="U0308_002820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEM2317772.1"
                     /translation="MRKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAG
                     PHQQIAEEVQKLAKKDGLEIKIKTFDDYNTPNTALNDGDLDANNYQTIPFLEQQKKDK
                     GYKLDVAFKTVAFPMGIYSNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKL
                     KDGVEEKATKKDIAENPLDLEIVELEASQIPAQLDEVAAAAINTNFAMGAGLSINKDA
                     IYHEPTKDNPYPNVFVVRSANKDDEVVKTLEKYYHSAEVKAFIEKEFNGSVVPAF"
     gene            968..1984
                     /locus_tag="U0308_002821"
     CDS             968..1984
                     /locus_tag="U0308_002821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEM2317773.1"
                     /translation="MIELHQVSKSFNVNGKTVEAVKNVSITVEKGEIFGVVGYSGAGK
                     STLVRCINLLERPDAGQVVIDGKNLSTLSSKELRVARRKIGMIFQGYNLLKTATVYDN
                     IAKPLKLEGVPKDEIETRVNKYLSIVGLEDKRNNYPSQLSGGQKQRVAIARALAHEPE
                     ILLSDEATSALDPETTEAILQLLLKINAELGITIFLITHELDVIQRICDRVAVMENGH
                     LVEQGTVLDIFTKAKHSTTKRFVGSEASFDIPQDLLEKYVATGKLVSLHFIGDEADEP
                     ALALVSRKFDVLPSILAGGIDHLKNGTLGKLLVHLKGDEVEYSKAISYLKESGVVVEE
                     VELL"
     gene            1981..2643
                     /locus_tag="U0308_002822"
     CDS             1981..2643
                     /locus_tag="U0308_002822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317774.1"
                     /translation="MSLFFEEWGPILWQGFLETLTMTGITLVISLAIGLPLGVFLTLT
                     RKGGQSENLVAYSILNWVINILRSLPFIILLFLMIPVTRFVVGTTIGIQGVIMPLVVF
                     TAPYIARLMESALLEVDRGVVEAYQAMGISTPKIIWSVVIREARSGIVLGLTIATIGL
                     IGATAMAGLVGAGGLGTIAYQYGFQRFEPTVMYTTIIILIIMVQALQSFGNFLSRRLK
                     KD"
     gene            2733..3512
                     /locus_tag="U0308_002823"
     CDS             2733..3512
                     /locus_tag="U0308_002823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen family hydrolase"
                     /protein_id="HEM2317775.1"
                     /translation="MWKLALCQTDVVFKYPDANYARIEKAIVEAAKNGADIAVLPEMW
                     NTGYALNELAGVADLNGERTKEFLATLSEKHQIAIIGGSVSISEGTKFSNTMYAFDKY
                     GGLLSSYKKVHLFQLMNEHLYLEAGNDKNLFRLDGVSCAGFICYDIRFPEWIRKHTSE
                     GSEVIFVSAQWPAERVTQWEQLLIARAIENQAFVVAVNRVGDDPNNHFNGHSLVIDPL
                     GNIVAHGGEDEGNIYAEIDLKLVAETRGIIPVFTDRRPELY"
BASE COUNT         1173 a          632 c          763 g         1109 t
ORIGIN      
        1 tattccattt tggtagataa gaggagctgg atatgttcga ctttccactt ctctattcta
       61 aatagagaag ttttttattg ttttcatgaa taaatctgga taatcacaca acatactagg
      121 gaggaaaaaa gatgagaaaa ttaacaaaag ggttaggaat tttacttgca tcaagtcttg
      181 ttttaggatt agcagcatgt ggaggaggca gtgacgacaa agccttaagc acagaaaaaa
      241 ttacaattgg aacaacagca ggacctcacc aacaaatcgc tgaagaagtt caaaaattag
      301 cgaaaaaaga cggtcttgaa atcaaaatca aaacatttga tgattataac acgccaaata
      361 cagctttaaa tgatggtgat ttggatgcga ataactacca aacaattcca tttttagagc
      421 aacaaaagaa agataaaggc tacaaattag acgttgcttt taaaacagta gcattcccaa
      481 tgggcattta ctccaacgat attaaagact tgaaaaatct taaaaaaggc gacaaaattg
      541 ccgttccaaa tgatccaagt aacgaatacc gtggtttaaa actgtttgaa gatgctggcg
      601 ttattaaatt aaaagatggt gtggaagaaa aagcaacgaa aaaagacatt gctgaaaacc
      661 cgcttgacct tgaaatcgtt gaacttgaag cttctcaaat acctgcacaa ttagatgaag
      721 ttgcagccgc agctatcaat actaactttg caatgggcgc tggactttct attaataaag
      781 atgccattta ccacgaacct acaaaagaca atccatatcc aaacgttttc gttgttcgta
      841 gtgccaacaa agacgatgaa gtcgtaaaaa cattagaaaa atattaccat tcagctgaag
      901 taaaagcatt tattgaaaaa gaatttaatg ggtctgtagt acctgcattc tagggagttg
      961 ttttattttg atcgaattac atcaagtttc aaaatcattt aacgtaaatg gaaaaaccgt
     1021 agaagccgtc aaaaatgttt ctattacagt agaaaaagga gaaattttcg gtgtcgttgg
     1081 ttacagtggc gccgggaaaa gtacccttgt tcgttgcatc aacctgcttg aacgtccaga
     1141 tgccggccaa gttgtgattg atgggaagaa cttatctacc ctatcaagca aagaacttcg
     1201 tgtcgctcgc cggaaaatcg gcatgatttt ccaaggatat aacctactaa aaaccgcaac
     1261 tgtctatgat aacattgcca aaccattaaa attagaaggc gttccaaaag acgaaatcga
     1321 gacgcgcgta aataaatact tgtcaattgt tggcttagag gataaacgaa acaactatcc
     1381 aagccaactt tctggcggtc aaaaacagcg tgtggcgatt gctcgtgctc ttgcgcatga
     1441 gccagaaatt ctcttaagcg atgaagcaac aagcgccttg gaccctgaaa caacagaagc
     1501 aattttgcaa ctgttactta aaattaatgc ggaactcggc attacgattt tcttaattac
     1561 acatgaactt gatgtcattc aacgtatttg tgaccgggtt gctgtaatgg aaaatggtca
     1621 tttagtggaa caaggtacgg ttcttgatat ttttacaaaa gcaaaacact cgacaaccaa
     1681 gcgctttgtt ggatcggaag ctagtttcga tatcccgcaa gatttgcttg aaaaatatgt
     1741 tgcgactggg aaattggttt ctcttcattt tattggagac gaagcggatg agcctgcgct
     1801 cgctcttgta tcacgtaaat tcgacgttct tccaagcatt ttagctgggg gaattgatca
     1861 tttgaaaaac ggaacacttg gaaaactgct cgttcattta aaaggggacg aagttgaata
     1921 cagtaaagct atttcttatt tgaaagaatc tggagtcgtt gttgaggagg tcgagttact
     1981 atgagtttgt tttttgaaga atggggcccg atactttggc aaggatttct agaaacgctt
     2041 acgatgactg ggattacact cgtgatttca cttgcgattg gtttaccact tggcgtattt
     2101 ttaacattaa cgcgtaaagg tggtcaatca gaaaacctgg ttgcctacag tattctaaac
     2161 tgggttatta atattttacg ttcattaccg tttattattt tgttattctt aatgattcct
     2221 gtaacacggt ttgttgttgg gactactatt gggattcaag gggttattat gccacttgtc
     2281 gtatttacgg caccttatat tgcccgttta atggaatccg cccttttgga agtggatcgc
     2341 ggagttgtgg aagcctatca agcaatgggt atttctacac cgaaaatcat ttggagtgtc
     2401 gttattcgcg aagctcggtc tggtatcgtt cttggcttaa ctatcgctac aatcggtcta
     2461 atcggcgcga ctgcaatggc tggacttgtt ggtgctggtg gactcggaac aattgcttac
     2521 caatatggtt tccaacgttt tgaaccaact gtcatgtata caaccattat tattttaatt
     2581 atcatggttc aagcactaca atcattcggt aatttcttat ctagacgtct taaaaaagat
     2641 taattcacta cttagagctt ggtgcgaagt gttccaatat ggactcgtca ccaagcttgt
     2701 gttattttta aaagaaaaag ggagcgaaga acatgtggaa gttggcatta tgtcaaactg
     2761 atgtagtttt taaatatcct gatgcaaact atgcacggat tgaaaaagct atagttgaag
     2821 ctgcaaaaaa tggggcagat atcgcagttt taccagaaat gtggaataca ggttatgctt
     2881 taaatgaatt agctggggtt gctgatttaa atggggagag aacgaaagaa tttttagcaa
     2941 cactttctga aaaacaccaa attgctatta tcggtggctc ggtctctatt tcggaaggaa
     3001 ccaaattttc taatacaatg tatgctttcg acaaatatgg tggactactt tcttcatata
     3061 agaaggttca cttatttcag cttatgaatg agcatctcta tttagaggct gggaatgata
     3121 aaaatctatt tcgactggac ggtgtttctt gcgctggttt catttgctat gatattagat
     3181 ttccagaatg gattcgcaaa cacacttcag aaggatcgga agtcattttt gtttcagctc
     3241 agtggccagc cgaacgtgtt actcagtggg agcaactact tattgcacgc gctattgaaa
     3301 atcaagcttt tgtcgttgca gtcaatcgag ttggcgatga tcctaataat catttcaatg
     3361 ggcactcact tgtgattgat ccacttggaa atattgtcgc tcatggcggt gaagacgaag
     3421 gaaatattta tgctgagatt gacttaaaac ttgttgctga aacgcgaggc atcattccag
     3481 ttttcacaga tagacgacct gagctttact aaatagctaa aagatgcaaa ataatatttt
     3541 ttgcatcttt ttctcattaa atgttcatat tatcggcaaa aaagtggcaa tttggtataa
     3601 ttaatataga ttaatttttt gttaattttg atattatgta ttatagttaa caaaaaaagt
     3661 aaaggggctg ctaataa
//
LOCUS       DASDYK010000178         3618 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.178, whole genome shotgun sequence.
ACCESSION   DASDYK010000178 DASDYK010000000
VERSION     DASDYK010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3618
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.178"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            30..509
                     /locus_tag="U0308_002824"
     CDS             30..509
                     /locus_tag="U0308_002824"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEM2317776.1"
                     /translation="MLKQQKSSPVGDLFITIDEKWIRNISYDEPKNWELLEGTIIEKE
                     LFQALTIQLDDYFEGKREHFDLPVLLKGTDFQQKVWQALSEIPYGVVVSYKDIAISAG
                     SPKAVQAVGQANRANPIPIIIPCHRCVKSNGELGGYNGADVDKKQYLLALEKGLSLS"
     gene            complement(525..2693)
                     /locus_tag="U0308_002825"
     CDS             complement(525..2693)
                     /locus_tag="U0308_002825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2317777.1"
                     /translation="MNCEKCNQNPATIQLYMNINGKRVEMPLCASCYAEVRNQANFGA
                     NEFPGASGSPFDDIFRQLSGAASQANREQRSQAQVQTQTAGGGNGLLDEFGTNLTDMA
                     KNEQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIVAGEVPS
                     KLMNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSA
                     EGSMDAGNILKPALARGDLQMIGATTLKEYRTIEKDAALERRFQPVTVSEPSTKETLT
                     ILNGLKPKYEDFHEVVYSPEALTAAVELSARYIQDRHLPDKAIDLMDEVGSKYNLSIE
                     KLDENTVSERVARLEDEKNQALQMEDYEKAAKVRDEITRLEENKTNNSFSERPVIQAS
                     DIQAIIEEKTGIPVGRLQEDEQSKMKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLK
                     SKNRPIGSFLFVGPTGVGKTELGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSP
                     PGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVS
                     FKDTVIIMTSNAGATDTEASVGFNTTTESKLEKGSDILAKLGAYFKPEFLNRLDSVIE
                     FKSLEKDDLVQIIDLMLVDLNEMLAQEDVTIDVSKEVKEHLIDLGYDPKFGARPLRRT
                     IQEHLEDAIADSLIEQPEAKHLVATLNENKEITITEQVTV"
     gene            complement(2856..3467)
                     /locus_tag="U0308_002826"
     CDS             complement(2856..3467)
                     /locus_tag="U0308_002826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM2317778.1"
                     /translation="MKSIKIDYKLVLGLVLCALLVILTYQFPRVFWYLYGAGMLFLLS
                     FVIFNDDLKKEFSFVKGILPGIFSGIVLYIIFYIGAFIIKVMPGGLENSVEAAFNKYS
                     THSLIIWLLLIVAIIPGEEIFWRGFVLKRLNHYFNPWFSNVFAALLCMVMMFPSGNFA
                     AIIGIFVASLVWNIMYSYRPSLLMLYLSHLTFAFLLLAALPIY"
BASE COUNT         1070 a          676 c          688 g         1184 t
ORIGIN      
        1 taataactta aggggagagg agcgacagaa tgctaaaaca acaaaaatca tcgccagtgg
       61 gtgatttatt tataactata gatgaaaagt ggattaggaa tatttcgtat gacgagccaa
      121 aaaattggga acttctagaa ggaactataa tagaaaaaga actttttcaa gcattaacta
      181 tccaactaga tgactatttt gaaggcaaga gagagcattt tgatttgccg gtgctcctta
      241 aaggaaccga ttttcaacaa aaggtttggc aagcattgag tgaaattccg tatggggttg
      301 ttgtgagtta taaagacatt gcgatttcag caggtagccc taaagctgtg caagcagtag
      361 gacaagcgaa tcgcgctaac ccaattccga ttatcatccc atgtcacaga tgcgtgaaaa
      421 gtaatggaga acttgggggc tataacgggg cggatgtaga taagaaacaa tatttacttg
      481 cattagaaaa aggcttgagt ttaagttaac tcaagccttt tttattacac tgttacttgt
      541 tctgttatag taatttcttt attttcgtta agggttgcaa caagatgttt tgcttctggt
      601 tgttcaatta gactgtcggc aatcgcatct tctaggtgtt cttggatagt ccggcgtagt
      661 ggacgtgctc cgaatttagg gtcataacca aggtcaatca aatgttcttt tacttcttta
      721 gaaacatcga ttgtcacatc ttcttgagcg agcatttcat ttaaatcaac gagcattaag
      781 tcgatgattt gtactaaatc gtctttttct agggatttaa attcaatgac gctgtctaga
      841 cggtttaaga attctggttt gaagtatgcg cctaattttg ctaagatgtc agaacctttt
      901 tcaagttttg attcggttgt tgtattaaag ccgaccgaag cttctgtgtc agttgcgcca
      961 gcgttacttg tcataatgat gactgtatct ttaaagctca ctgtacgtcc ttgtgaatca
     1021 gttagtcgac cgtcttctaa aatttgcagg aacatatgtt gaacgtctgg atgtgctttt
     1081 tcgatttcgt ctaacaaaat gatgctatac ggattgcgac gaactttttc tgttaattgt
     1141 ccagcttctt cgtgaccaac atagccagga ggggaaccga ttaatttaga gacgctgtgt
     1201 ttttccatga attcactcat gtctaaacga atcatcgctt cactagtacc aaacaattca
     1261 cgagctagcg tgcgtccaag ttctgttttt ccgacaccag ttggtccaac aaataggaag
     1321 gaaccaattg ggcgattttt tgatttgagg ccaacacggc tacgacgaat tgctttagct
     1381 acttttctta cagcatcttc ttgaccaatg acttttccag ttaagttact ttctaagttc
     1441 ttcattttag attgctcgtc ttcttgtaag cgtcctactg gaatacctgt tttttcttca
     1501 ataattgctt ggatgtcgga tgcttggatg actggacgct ctgagaagga gttatttgtt
     1561 ttattttctt ctaagcgagt aatttcatca cgaactttgg ctgccttttc gtagtcttcc
     1621 atttgaagag cttgattttt ttcatcttct aaacgggcaa cacgttcgct caccgtattt
     1681 tcgtccagtt tttcaatgga tagattatat ttcgagccaa cttcatccat taaatcaatt
     1741 gctttatctg gcaaatgacg atcttggata taacgagcgc ttaattcaac tgctgctgtt
     1801 agtgcttctg gtgaataaac tacttcatgg aaatcttcat attttggttt taaaccattt
     1861 aaaatagtta gcgtttcttt tgtggatggt tcgcttacag ttactggttg gaaacggcgc
     1921 tcaagtgcgg catctttttc gattgtgcgg tattctttta gtgtagtagc accaatcatt
     1981 tgtaaatcgc cacgagctag agctggtttt agaatgtttc ctgcatccat cgagccttct
     2041 gcggaacctg ccccaacaat cgtatgcact tcatcaataa agagaatcgt gtttttacgt
     2101 tcttgtagtt ctttaatcag ttgtttcatg cgttcttcaa attgaccgcg tatccctgtt
     2161 ccagaaacaa gtgaagcgac atctaataag ataacttctt tgttcattaa tttgcttgga
     2221 acttctcctg cgacaatcgc atttgcaagt ccttcgacga cagctgtttt accaacacct
     2281 ggttcaccaa ttaagactgg attattttta ttacggcggt ttaatatttc aatgacgcgt
     2341 ttaatttctt tgtcacgacc gatgacaggg tcgagttgct catttttcgc catatctgtt
     2401 aagtttgttc caaattcatc tagtaaacca ttgccgccac cagcagtttg tgtttgtact
     2461 tgtgcttggc ttctttgttc acggtttgct tgactagcag caccactcaa ttgacggaaa
     2521 atatcatcaa acggggaacc gcttgctcct gggaactcat tcgccccaaa gtttgcttga
     2581 tttctaactt ctgcataaca agaggcacaa agcggcattt ctacacgctt gccattaata
     2641 ttcatatata gttggattgt tgctggattt tgattacatt tttcacagtt catatataat
     2701 ttcctccttt taaaaatgag aaatgaaagg tcttgacttt gactatcttt gaccttatga
     2761 ctttattata tactgaccta ttttgacttt caagtatttt gcttattttt tttataaaaa
     2821 aaacacccct aaaaaggagc gtttttgtgc tatttttaat aaattggtaa ggctgcgagt
     2881 aacaaaaacg caaaggttag atgcgataaa tatagcatga gtaggcttgg gcgataggag
     2941 tacatgatat tccatacgag cgaagcgaca aagataccga taatcgctgc aaagttgcca
     3001 cttgggaaca tcattaccat acatagtaac gctgcaaaaa cattcgaaaa ccaaggattg
     3061 aaataatggt ttaatcgttt taatacgaag ccgcgccaga aaatttcttc tccagggata
     3121 atggccacga taagcagtag ccaaattatc aaagaatgcg tcgaatactt attaaaagca
     3181 gcttctacag aattttctag accgcctggc attactttaa taataaaagc gcctatgtaa
     3241 aaaataatat aaaggacaat tccggaaaaa atacctggca aaatgccttt aacgaacgaa
     3301 aactcttttt ttaaatcatc attaaaaatc acaaaactaa gtaaaaataa catcccagct
     3361 ccatataaat accaaaaaac acgtgggaac tgatatgtta gtataacgag tagggcgcat
     3421 aaaacaaggc ccagtacaag tttataatcg atcttgatgc ttttcaaaat actttacacc
     3481 tcttcttaac aaatacttct catactactt taaaacaaat gaaatcgttt ggcaacaatt
     3541 aaacaaaaga taagataaaa gttgtggaat ttaataaatc ctatataatg aaaaaatagg
     3601 agtggttcat agatgtta
//
LOCUS       DASDYK010000179         3505 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.179, whole genome shotgun sequence.
ACCESSION   DASDYK010000179 DASDYK010000000
VERSION     DASDYK010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3505
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.179"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(419..2224)
                     /gene="pepF"
                     /locus_tag="U0308_002827"
     CDS             complement(419..2224)
                     /gene="pepF"
                     /locus_tag="U0308_002827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HEM2317779.1"
                     /translation="MSKTNALPLREEVPENLTWDLTTIYPNDEAWEQAFTDLQKITEE
                     SEQFKGRLSESSQTLYEALQFRDNAYDLISNLYVYAHLKMDQDTANAKYQGLHSRAGS
                     LVTKLMSALSYYDPEILAMDESVLKQFLNENKDLQLYAHLLEELNLSRPYILSEKEEA
                     LLANAGEVLGSSSNTFNTLNNADMKFPTIKDENGEDIEITHGRFGKLLESNDPRVRRE
                     AFLGVYSVYEGLKNTLASTLNGQVKKSNFYASTRGYTSAREAALSGNHIPETVYDSLL
                     KSVNANADLLHRYVKLRKELLGLEELHMYDLYTPLSDDVNLEFTYEEAKELVLEALKP
                     LGDEYQAILKEAFDSRWIDVMENKGKRSGAYSSGSYSTSPYILLNWQDNINNVYTLAH
                     ELGHSVHSYYTRKNQPFVYGDYSIFLAEVASTTNENLLTDYLLKKYDDPKVRAYLLNH
                     YLDGFKGTVFRQTQFAEFEHAIHQADQEGVALTADYLTETYFDINKKYYGEAMVYDAE
                     IGYEWSRIPHFYMNYYVFQYATGFSAASALSAKILTEGQEAVTAYIDFLKAGSSDYPI
                     DVLKKAGVDMATPNPVDDALKVFEQRLDELEKLVK"
     gene            complement(2297..3412)
                     /locus_tag="U0308_002828"
     CDS             complement(2297..3412)
                     /locus_tag="U0308_002828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein CoiA"
                     /protein_id="HEM2317780.1"
                     /translation="MIIIFTARNNMGETFTITKMNVERIKQEERLFCKSCASPVMIKA
                     GQIKIPHFAHEKTMKCAFASEGESEEHLAAKKQIMAWYCYQSIPVEVESYFPEIKRQA
                     DIFVNGKAVIEFQRSSISISEMIQRTMDYLSIGLEVHWILGQVVRKEKGRICLSAFQQ
                     AFIQSDKKLGYHFWHYSTEREICTLYYHLTFEKGNRFFASEMKFSMKAPFSEWKKKLA
                     RIITRHAYVKRDRELERQKICFYYAKFKKHGQFMQKLFNAGYYLHYLPKEIGVDLEEQ
                     FLVITPAVEWQFDLWEKFFKGLEKGDTFSECCFFESFQSVVTQILTIWLSPNESLKLG
                     KSYLSYLIGEGVLSTIPDNRYRVKRKMVFTNTRAAHI"
BASE COUNT         1111 a          729 c          495 g         1170 t
ORIGIN      
        1 tgtatagtcc cgcagatttc caaaatcaat cacttcaagt gacatatcat taatcttcgt
       61 atctacactt cccgcaaaaa gaagtacttc tcgtagtaat ttttcatctt caaattccat
      121 ctttaatcct cctttaattc tgagttagta tcgtaataac gtaaaaagcc gtagcaaaat
      181 gccacggctt cttacagcgc aatcaaaagg agaaattcac acaatcaaat aaagggggta
      241 tttgtttgtg atttatttca cggttataat ataccatata aacgcttata attcaatagt
      301 tcacatacct atttttattt gtctatccta tgaatattgg catcactcaa acatacgaaa
      361 aaaaagactc gcagccatta tcgctacgat gtcttttttt agcaaatttc acaatatatt
      421 atttaactaa tttttctagt tcatctaatc tttgttcaaa tacttttagt gcatcatcca
      481 ccggattagg agttgccata tcaactcctg cttttttcaa cacatcgata ggataatccg
      541 aacttcccgc tttcaagaaa tcaatatagg cagtcaccgc ttcttggcct tctgttaaaa
      601 tcttcgcact caatgcagat gctgcagaaa aaccagttgc atattggaac acataataat
      661 tcatataaaa atgcggaata cgagaccatt cataaccgat ttcagcatca taaaccatcg
      721 cttctccgta atatttcttg ttaatatcaa aatatgtttc ggtcaagtaa tccgcagtca
      781 gcgccactcc ttcttgatcc gcttgatgaa tagcatgttc aaattcagca aattgggttt
      841 gacggaatac agtacccttg aatccatcca aatagtgatt caacaagtaa gcacgaactt
      901 ttggatcatc atatttctta agaagataat cagttagtaa attttcattt gttgtcgaag
      961 caacctccgc taagaaaatc gaataatcac cataaacaaa tggttggttt tttcttgtat
     1021 aataactatg cacactatgc cctaattcat gcgcaagtgt gtaaacatta ttaatattat
     1081 cctgccaatt gagtaaaata taaggactcg tactatacga accagaagaa taggctccac
     1141 tacgttttcc tttattttcc atcacatcaa tccaacgact atcaaatgct tcttttaaaa
     1201 ttgcttgata ttcatcacca agcggtttaa gcgcttcaag cacaagttct ttcgcttctt
     1261 cataagtaaa ctccaaatta acatcatcag aaagtggcgt ataaagatca tacatatgca
     1321 attcctctaa gccaagtaat tctttacgta acttcacata acgatgaagc aaatctgcat
     1381 tcgcatttac tgattttaac aaggaatcat atactgtttc aggaatatgg ttcccagaaa
     1441 gagccgcttc acgagctgac gtgtagccac gagtggaagc ataaaaatta gacttcttca
     1501 cttgtccatt caaagtagag gctaaggtgt tttttaggcc ttcataaaca gaatacacac
     1561 caagaaacgc ttcacgacga actcgcggat cattactttc caacaatttc ccgaaacgac
     1621 catgagtaat ttcgatatct tccccgttct catctttaat ggttggaaac ttcatatctg
     1681 cattattcaa ggtattaaaa gtattagacg aactgccaag cacttcacct gcgttagcta
     1741 gtaaagcctc ctctttctca cttaaaatat acggtcggct tagatttaac tcttctagta
     1801 aatgcgcata taattgtaaa tctttgttct catttaaaaa ttgttttaaa acgctttcgt
     1861 ccatagctaa aatttcagga tcataataag acagtgcaga cattagcttt gtaactaggc
     1921 ttcctgcgcg actatgtaaa ccttgatatt tcgcattagc tgtatcttgg tccattttca
     1981 aatgcgcata tacatataag ttactaatta aatcatatgc attatctcga aattgaagtg
     2041 cttcatatag tgtctggctg ctttccgata aacgcccttt aaattgctcg ctttcttctg
     2101 tgattttttg caaatctgta aatgcttgtt cccaagcttc atcgtttgga taaatcgtag
     2161 ttaaatccca agttagattt tctggtactt cttctcttaa aggtaatgca tttgttttac
     2221 tcaatattaa aacccccaac catagtcatt ttgtttttat tatgagccaa aataactaaa
     2281 aaagcaaaac agatgattat atatgtgctg ctcgagtgtt agtaaaaacc attttccgtt
     2341 tcacacgata tcgattatct ggtatggtag ataacacccc ttcaccaatc aaataagaaa
     2401 gatatgattt tcctaacttc aaactttcat ttggagaaag ccagatagtt aaaatttggg
     2461 ttacaactga ttgaaaactc tcaaaaaagc agcattcgct aaaagtatct cctttctcca
     2521 gacctttaaa aaacttttcc cacaaatcaa attgccattc aacagcaggt gtgataacta
     2581 aaaattgttc ttctaaatcc acacctatct ctttcggtaa ataatgcaaa taataaccgg
     2641 cattaaataa tttttgcata aattgtccat gttttttaaa tttagcataa taaaaacaaa
     2701 ttttttgtct ttcgagttct ctatctcgtt ttacataggc atggcgtgta ataattctag
     2761 ctaacttctt cttccattca ctaaaaggtg ccttcataga aaatttcatt tcacttgcga
     2821 aaaaacgatt tcctttttca aatgttagat gataataaag tgtacaaatc tctcgctcag
     2881 tagaatagtg ccaaaaatga taacccaatt tcttgtcaga ctgaataaaa gcttgttgga
     2941 atgcagaaag acaaatacgc cccttctcct tcctaaccac ttgcccgagt atccagtgaa
     3001 cttctaatcc aattgataag tagtccattg ttcgttgaat catttcacta attgaaatag
     3061 aagaacgttg aaattcaatt actgccttcc cattcacaaa aatatctgct tgtcgtttta
     3121 tttctggaaa ataactttcc acttccacag gaatactttg atagcaatac caggccatga
     3181 tttgtttttt agctgctaaa tgttcctcgc tctccccttc agaagcaaat gcacacttca
     3241 ttgtcttctc gtgggcaaag tgcggtattt ttatctgtcc tgcttttatc attactgggc
     3301 ttgcacaaga cttacaaaac agtctttctt cttgcttgat tcgttccaca ttcatcttag
     3361 taatagtaaa agtttctccc atgttatttc tggctgtaaa aataattatc actctcctat
     3421 tagctcttta atattattat tcgccaagga gcatccaaat tcctttctta tttttaaaat
     3481 cacaaaaaag ccccgtttgg ctatt
//
LOCUS       DASDYK010000180         3384 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.181, whole genome shotgun sequence.
ACCESSION   DASDYK010000180 DASDYK010000000
VERSION     DASDYK010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3384
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.181"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            13..192
                     /locus_tag="U0308_002829"
     CDS             13..192
                     /locus_tag="U0308_002829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007544702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2317781.1"
                     /translation="MKTDEVAKELGVSYSFASKLVRNLNKDLDERGFITIAGRVSRKY
                     YEEKLYGEIQKEGGN"
     gene            195..1268
                     /locus_tag="U0308_002830"
     CDS             195..1268
                     /locus_tag="U0308_002830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003532932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM2317782.1"
                     /translation="MAAFKDKNGTWFTSFRYINWQGEKKQKVKRGFSTRKEALEWERQ
                     FLQQKTADLTMTFLSFWEIYKKDMKNRIRESTWETKISIVERKILPYFKNRKMSEIAP
                     KDIIQWQNEMISYRDKNGKAYSPVYLKTLHNQLSAMFNHAVRFYELKSNPARKAGNMG
                     KEKSVEMLFWTKEEYQKFSDSMMDKAISFYAFEILYWCGIRLGELLALTASDFDFNKG
                     TLSISKSCQRLKGMDVITEPKTPKSNRIIQMPEFLGEEIQEYIQSIYKWEPDERLFPI
                     TKSYLHSEMTRGAKEQKIKRIRIHDLRHSHVSLLIDSGFSAVAIADRLGHESIDVTYR
                     YAHLFPTKQMEIANMLDNLKGEY"
     gene            1270..1581
                     /locus_tag="U0308_002831"
     CDS             1270..1581
                     /locus_tag="U0308_002831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
                     /protein_id="HEM2317783.1"
                     /translation="MSVKTLDGKGRWRNKIVAFRVSPEENEHLNKLVKLSGLNKQEYL
                     IHRILMEEITVNYNPRVFKAFRNQINEFSELLKDTQPVDKETAELMAYTIDLLQKFRE
                     E"
     gene            1767..2108
                     /gene="mobC"
                     /locus_tag="U0308_002832"
     CDS             1767..2108
                     /gene="mobC"
                     /locus_tag="U0308_002832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid mobilization relaxosome protein MobC"
                     /protein_id="HEM2317784.1"
                     /translation="MVNRNRNIDLKFRVTEEEKAFIEMKMKEAGITNREAYLRKMAID
                     GAIIVSNYDETKKLTLELNKIGTNINQIARIANTDNKISKDNIKKIEEMMQKVWQLQR
                     YGLSKKRSIKQ"
     gene            2057..>3384
                     /locus_tag="U0308_002833"
     CDS             2057..>3384
                     /locus_tag="U0308_002833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HEM2317785.1"
                     /translation="MAVTKIWSIKKTLDKAMKYILNPIKAKYVYSYACAPETADLEFE
                     LTLDQNSHSGGINKAYHIIQSFKPEETTPEQAHEIGKQLLEQHLKGKYEYILTTHIDK
                     EHIHNHVIFCASSFVEHKKYNDCMKTYYQLREASDTLCAEHDLSVIPPNQNKGKSHYE
                     WQMDQQGNSWKAQLRTSIDMCIKNSKTFDDFASQMQTQGYEIKYGKHIAFRAEKQKRF
                     TRAMQLGGNYTEENIKLRIAQKDKLPIKKAKKINLKNEPLSVMVALENNKKVIESKGY
                     EHWAKLHNLKQSAKTVNLLKELGISSIEEWEQKKISNQEIMNANMAEIKVIEKELANK
                     KFILKQLITYEDTKGIYHSADKQLLNTKEPQSAIQLYKTAVKALKQVNIKPSKQIKDE
                     LYRQIQSLQNQQQELYKKHKNCKKNQKQDRIIDRNLTQISTKITDMLSNR"
BASE COUNT         1386 a          473 c          637 g          888 t
ORIGIN      
        1 aaatcaattt tcatcaaaac agatgaagta gcaaaggagt taggggtttc ttattctttt
       61 gctagtaagt tagtgagaaa tttaaataaa gatttagatg aacgtggatt tatcacaatt
      121 gctgggcgcg tcagtagaaa atattatgaa gaaaaattat atggagaaat acaaaaagaa
      181 ggaggaaatt aacattggca gcattcaaag ataaaaacgg tacctggttt acgtcatttc
      241 ggtatattaa ttggcaaggt gaaaaaaagc aaaaagtgaa acgaggattc tctacaagaa
      301 aagaagcact tgaatgggaa cgacaatttt tacaacaaaa aacagcagac ttaacaatga
      361 ctttcctgtc cttttgggaa atttataaga aggatatgaa aaatagaatt agagagagta
      421 cttgggaaac taaaataagt attgtagaaa gaaagatatt accgtatttc aagaatagaa
      481 aaatgagtga gattgcacca aaagatatta tccaatggca gaatgaaatg atttcttatc
      541 gagataaaaa cgggaaagct tattctcctg tgtatctaaa aacgcttcac aatcaattga
      601 gtgcgatgtt taatcatgca gtacgatttt atgaattaaa gtctaaccca gcgagaaaag
      661 caggtaatat gggaaaagag aaaagcgtgg agatgttatt ttggacgaaa gaagaatacc
      721 aaaaattttc ggactccatg atggataaag caatatcatt ttatgctttt gaaattttat
      781 attggtgtgg aattcgacta ggtgagttac ttgctcttac tgcttcagat tttgatttta
      841 ataaaggtac actatccatt tcgaaatctt gtcagcgtct taagggtatg gatgtgataa
      901 ccgaaccaaa aactcctaaa agtaatcgta tcatacaaat gccagaattt ttgggagaag
      961 aaattcaaga gtatattcaa tctatttata aatgggagcc agatgagcgt ttgtttccaa
     1021 taacaaagag ttacttgcac agtgaaatga caagaggagc taaggagcaa aaaataaaac
     1081 gcatacgcat ccatgattta agacattcgc atgtatcact tctaatagat agcggatttt
     1141 cagcagtggc aattgcagat cgcttgggac acgaaagtat agatgttacg tatcgttatg
     1201 cacacctatt tccaaccaaa caaatggaaa ttgcaaatat gttagacaac ttaaaaggag
     1261 agtattaata tgtcagttaa aacattagat ggaaaaggac gttggagaaa taaaatagtt
     1321 gcatttaggg tatcaccaga agaaaatgaa cacttaaata aactcgtgaa attgtcaggt
     1381 ttgaataaac aagaatattt aatccataga attttaatgg aggagataac tgtaaattat
     1441 aatccgaggg tatttaaagc atttcgaaac caaataaatg agtttagtga gctactaaag
     1501 gatactcaac cagtagataa agaaacagcc gagttaatgg cttacacaat tgacttgctt
     1561 caaaaattta gagaagagtg aatttcattc ttctttttat tatcacgtaa atttgaaaag
     1621 taatagagaa gcaagcactg gatatggtac cccatatcca aattccaccc cgtttcgcat
     1681 tcgcgactcg tgtttgaaat tgcttgttgg ggaaatcccc aaaccccttg tttttaaaat
     1741 taaattggaa aggaagaaag tgaaaaatgg taaataggaa tcgaaatatt gatttgaaat
     1801 ttagagttac tgaggaagaa aaagcattca ttgaaatgaa aatgaaagaa gcgggaataa
     1861 cgaaccgtga agcatattta agaaagatgg cgattgatgg agcgattatt gtttcaaatt
     1921 atgatgaaac gaaaaaactt actttggagc taaataaaat tggtacgaat attaatcaaa
     1981 ttgcacgaat agcaaacaca gataataaaa tttcaaaaga taatattaaa aaaatagagg
     2041 agatgatgca aaaagtatgg cagttacaaa gatatggtct atcaaaaaaa cgctcgataa
     2101 agcaatgaaa tatattctaa atccaatcaa agctaaatat gtttatagtt acgcctgcgc
     2161 accagaaact gccgacttgg agtttgaatt aacattagac caaaatagtc actcaggagg
     2221 tattaataaa gcttatcata ttattcaatc gtttaaacct gaggaaacta ccccagaaca
     2281 agcacatgaa atcggcaaac aattactgga acaacactta aaaggtaaat atgaatatat
     2341 actaacgaca catatagata aagaacatat ccataatcac gtgatatttt gcgcatctag
     2401 ctttgtggag cataaaaaat ataatgattg tatgaaaaca tattatcagc tgagagaggc
     2461 aagtgataca ttatgtgcag aacatgatct ttctgtaatt ccgccaaacc aaaataaagg
     2521 aaaaagtcac tatgaatggc aaatggatca gcaaggaaac agctggaaag cacaattgag
     2581 aacctctatt gatatgtgta taaaaaatag taagacattt gatgatttcg caagccaaat
     2641 gcaaacacaa ggatatgaga ttaaatatgg taagcatatt gcttttcgtg ctgaaaaaca
     2701 aaaacgattc acacgagcga tgcaactagg cggaaactac acagaagaaa atatcaaatt
     2761 acgtatcgct caaaaagata agctgccaat caaaaaagct aagaaaataa acctgaaaaa
     2821 cgagccactt agtgttatgg ttgcattgga aaataataag aaagtcatcg aaagtaaagg
     2881 ctatgagcat tgggcgaaat tgcataacct taaacaaagt gcaaagactg ttaatttact
     2941 gaaagagctt ggtatttctt ctattgagga gtgggagcag aaaaaaataa gtaatcaaga
     3001 aataatgaat gctaatatgg cagaaataaa agttattgaa aaagaattag ctaataagaa
     3061 atttattttg aagcaactca ttacctatga agatacaaaa ggaatatatc attctgcaga
     3121 taagcagcta ctgaatacca aggaaccaca gtctgctatt caattgtaca aaactgctgt
     3181 taaggcgctt aaacaagtta atattaaacc gagtaagcag ataaaagatg agctatatag
     3241 acaaatacaa agtttacaga atcagcaaca agagctatac aaaaagcata aaaattgcaa
     3301 aaaaaaccaa aaacaagata gaattattga tcggaattta acgcaaatct ccacgaaaat
     3361 aacagatatg ttatcaaata ggga
//
LOCUS       DASDYK010000181         3325 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.183, whole genome shotgun sequence.
ACCESSION   DASDYK010000181 DASDYK010000000
VERSION     DASDYK010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3325
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.183"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            24..302
                     /locus_tag="U0308_002834"
     CDS             24..302
                     /locus_tag="U0308_002834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3116 family protein"
                     /protein_id="HEM2317786.1"
                     /translation="MDEPTKAVIYQILSKTEEQNATMDHLVFEMMQFPGAAAFTKNEL
                     LFGIYWLETYHYIFRMNENQKTRYYRTEKGHEKLAELELLKKNSKKTT"
     gene            complement(330..773)
                     /locus_tag="U0308_002835"
     CDS             complement(330..773)
                     /locus_tag="U0308_002835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2317787.1"
                     /translation="MTASDLEDFLSTAITDYANEKVEAGTWDEEEALAKSQDSFNKLL
                     YDGITTPNEYLYSIISGEKIGYIWFHVDETRSGKHAFIYDFVIFEAFRGKGFGTKTLE
                     ALDALAKEMQITKIELHVFAHNQTAIGLYNKVGFQNTDITMAKYL"
     gene            complement(804..1505)
                     /locus_tag="U0308_002836"
     CDS             complement(804..1505)
                     /locus_tag="U0308_002836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEM2317788.1"
                     /translation="MKKTIQSVGVWGDSIMKGVLFNPEKNRYTLLKNNCIKRASEKLG
                     LTFQNHSTMGRTITKGHEILTKDLAKDATNDIAIIEFGGNDCDFNWTEVSENPTAEHI
                     PSTPLNIFETQLLEMIARLKKLDIKPILMTLPPLHAKRYFDFITRNGLNKDNILQFLG
                     GDVEMIYRWQERYSNTISRIAAETGSHIIDVRDSFLAEFHYENLLCADGIHPNEAGHI
                     AMSRKFIQYASFHKA"
     gene            complement(1590..3269)
                     /locus_tag="U0308_002837"
     CDS             complement(1590..3269)
                     /locus_tag="U0308_002837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317789.1"
                     /translation="MWKKHKWLIIAVLLLVIYVAPLFILGGNSHVRIHDNLDSNVTWY
                     KMVLDSGDYTAKVGTANIDQIMDDSVPRDSFDSEFVGIDWLYMIFSTPIAFAMSQLIT
                     RVFAFLGLFLWARDYLIKDKKYLVPLYFVSLAFALTPFWPSGMLSTLGMPLALWAFLN
                     IRNNKRRIWNVVILTLLPFYSSLILGFCFFLVMVGCIWLYDVFKKKQVNIRFLLSMLY
                     MTLLYALVNYRFIYAMFLHPEPDSRSEFSLPELSFLSSIRLSFKNFIIGHTHDQALAG
                     FVIIPVLLLVLALIIIKREWGKEKLFLWLFGFNLFLSFWYGFWWYRGWNVIKEHVEIM
                     RTFNFSRFHFLQPFLFYGLFALAIVYLIKKGNWWRKLAYVVVALQLVVVFANNSEIYY
                     RTGNGSPSINQFYATEQMEEIKDYIGKPQSSYRVGSIGLHPSVSQESGFYTVDGYVNS
                     YPLAYKRAFRKIIAGELDKSPVLEDYYDNWGNRCYIFSAELGKKYDFGKDSKKHIKQL
                     DFNSEAFKKVGGEYILSAVPIDNASEVGLQFEKAFDNKDSYWKIYLYKATK"
BASE COUNT         1119 a          634 c          557 g         1015 t
ORIGIN      
        1 gttttaatag ggggattgat agaatggatg agccaaccaa agcagtgatc tatcaaattt
       61 tatctaaaac agaagaacaa aatgcgacga tggatcattt ggttttcgaa atgatgcaat
      121 tccctggtgc cgcggctttt actaagaatg aattgctgtt tggcatttat tggctagaaa
      181 cgtatcatta tatttttcga atgaatgaaa atcaaaagac gagatattac cgaacagaaa
      241 aagggcacga aaaattagca gagctagaac ttttaaaaaa gaatagtaaa aaaacaactt
      301 gattttccgg gaaatcaagt tgttttttat tataaatatt tagccattgt aatatcagtg
      361 ttttgaaaac caactttatt atataagccg atagctgttt gattgtgcgc aaatacatgt
      421 agttcgattt ttgtaatttg catttctttc gcaagcgcat ctaatgcttc taaagttttt
      481 gttccgaatc ctttaccacg gaatgcttcg aaaatcacaa aatcataaat gaaagcatgt
      541 ttaccagagc gagtttcgtc cacatggaac caaatataac cgattttttc gcctgagata
      601 atgctgtaga gatattcatt tggtgtagta attccgtcat atagcaattt gttgaaagag
      661 tcttgggatt tagctaaggc ttcttcttca tcccatgtgc cggcctcaac tttttcattt
      721 gcgtaatctg taatggctgt agataaaaaa tcttctaaat cagaagcagt catagtttgt
      781 aaatgtaaaa taaaaattcc tccttatgct ttatgaaaac ttgcgtactg aatgaatttg
      841 cgtgacatgg caatatgacc agcctcgttt ggatgaatac cgtcagcaca gagcaaattt
      901 tcataatgaa attcagcgag aaaactatca cggacatcaa taatatggct accagtttcg
      961 gctgcgatgc gcgaaatcgt attgctatat cgttcttgcc agcgataaat catctctaca
     1021 tcgccaccta aaaactgcaa aatattatct ttatttagtc catttctcgt aatgaaatca
     1081 aaataacgtt ttgcatgaag gggaggcaat gtcattaaaa tgggtttaat atccagtttt
     1141 tttagtcgtg caatcatttc aagtaattgc gtttcaaaaa tgttaagtgg ggtgctagga
     1201 atgtgctcag ctgtcggatt ttcggaaact tccgtccagt taaaatcaca atcatttccg
     1261 ccaaattcga taatggcgat atcatttgtt gcatcttttg ctaagtcttt tgttagaatt
     1321 tcgtggcctt tagtgattgt acgacccatt gtggaatgat tttgaaaagt caggccaagt
     1381 ttttcggatg ctcgtttaat gcagttgttt ttaagcaatg tatagcgatt tttttcaggg
     1441 ttgaaaagaa cgcctttcat aatactatcg ccccaaacac caactgactg aatggttttc
     1501 ttcataatca tcactccttt tattaatcat accacaaaaa aagcgaaagg cgcgattagt
     1561 tcgttaagaa aaaatcacgc ctcacgcttt tatttagttg ctttgtataa atagattttc
     1621 cagtaagaat ccttattatc gaaggctttt tcgaactgga gtccgacttc tgaagcatta
     1681 tcaatcggaa cggctgatag aatatactcg ccgccaacct ttttaaatgc ctctgaatta
     1741 aaatctaact gtttaatgtg ttttttcgaa tccttgccga aatcgtattt tttacctaat
     1801 tcggcagaaa atatataaca acgattaccc caattatcat aataatcttc taaaacagga
     1861 ctcttgtcta gctcaccagc aataattttt cggaaagccc ttttataagc aagaggatag
     1921 gaattcacat agccatcgac agtataaaag ccactttctt gggaaacaga cgggtgcaga
     1981 ccaatacttc cgacacggta acttgactgc ggtttaccaa tataatcttt aatttcttcc
     2041 atttgctccg tggcgtaaaa ttgattaatg cttggcgagc catttccagt gcggtagtaa
     2101 atctcagagt tattagcgaa aacaacaaca agctgcagcg caactaccac ataagctaac
     2161 tttcgccacc aatttccttt ttttattaaa taaacaatcg caagtgcaaa cagtccataa
     2221 aataaaaacg gttgtaaaaa atggaagcgc gaaaagttaa atgtccgcat gatttccacg
     2281 tgttctttga ttacattcca accacgatac caccaaaatc cataccaaaa agataagaat
     2341 aaattaaagc caaatagcca taaaaacagt ttttctttgc cccattcacg tttgataata
     2401 atgagtgcaa gtacaaggag taatacaggt ataataacaa atccagccag tgcctggtca
     2461 tgcgtgtgtc ctataatgaa atttttaaag ctaagtcgga tagaacttaa aaatgataac
     2521 tctggtagac taaattcgct ccttgaatcc ggttcggggt gcaaaaacat tgcataaata
     2581 aaacgataat ttacaagtgc atacagaagc gtcatataaa gcatgctaag taaaaatcga
     2641 atattcactt gttttttctt gaaaacatcg tacaaccaaa tacatccaac cattactaaa
     2701 aagaaacaaa atcctaatat taaactagaa taaaatggaa gcaacgtcag tataaccaca
     2761 ttccaaattc gccgtttatt attcctaata tttaaaaatg cccatagagc aagcggcatt
     2821 ccaagcgtac tcaacatccc tgatggccaa aatggtgtta gcgcaaaagc taaggaaaca
     2881 aaataaagtg gcacgagata ttttttatct ttaataaggt aatcccttgc ccataaaaat
     2941 aatcctaaaa atgcaaatac acgtgtaatt aactgactca tcgcaaaggc aatgggtgtg
     3001 ctgaaaatca tgtaaagcca atcaatccca acaaactctg aatcaaatga atctctgggg
     3061 acgctgtcat ccattatttg atctatattt gctgtcccga ctttagcggt ataatccccg
     3121 ctatccaaaa ccattttgta ccaagttaca ttagaatcca agttatcatg aatccttaca
     3181 tgactgttcc cgccaagaat aaataatgga gcgacataaa ttaccaataa taatacagca
     3241 ataattagcc acttatgctt tttccacata gttctcctcc ttcattatct ctactatata
     3301 tgtacccgag aaaactattt tcaat
//
LOCUS       DASDYK010000182         3314 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.184, whole genome shotgun sequence.
ACCESSION   DASDYK010000182 DASDYK010000000
VERSION     DASDYK010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3314
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.184"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            57..434
                     /locus_tag="U0308_002838"
     CDS             57..434
                     /locus_tag="U0308_002838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317790.1"
                     /translation="MARLPNQYLFVKTVVDAERLFDEKTKSYVVVELRDAYEYADGKI
                     TDNVIGKNVTLMCTRDEEDYGVTKAGKKIPNLKFKQFDIKILNGAFEVPKGTRVKMDL
                     GKLEKAVGYKTTLVNKYRLYLKI"
     gene            509..1411
                     /locus_tag="U0308_002839"
     CDS             509..1411
                     /locus_tag="U0308_002839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317791.1"
                     /translation="MRVTQSKLNGFYVFGSTLMLIVIWILLAYQNESMNQVFKAVGIN
                     FRIELQKVNNIFFVAVTMIIFPTILFWSLRNKIWEGKRALKRYFLILNLRKEMIDANY
                     RDERHVTERVVQMPTIKVEFDNKEMTSGKLIVRDSLEFHDRLAKATFTPSLKGFKVED
                     FYLSDDGDWWIYNFYSVNSQIQAVFDSLEEYLNWSNETTNKFQLRIDNRLSFDLKHTL
                     LVGATRSGKTYGLIGLLLQMINKLIHYELFFADPKNDQLRKIGNWINGKNTAYTTENI
                     IDLIDSYNNGEKDPVSLWKRTQLQ"
     gene            1672..2144
                     /locus_tag="U0308_002840"
                     /pseudo
     CDS             1672..2144
                     /locus_tag="U0308_002840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002305065.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2137..2304
                     /locus_tag="U0308_002841"
     CDS             2137..2304
                     /locus_tag="U0308_002841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEM2317792.1"
                     /translation="MINDEKKFKKNQSKIRDVSSNFNAQTIYIGKRGENIDAMLRIYD
                     KKAEQLGSSKR"
     gene            2301..2807
                     /locus_tag="U0308_002842"
     CDS             2301..2807
                     /locus_tag="U0308_002842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEM2317793.1"
                     /translation="MTHLRHEAEKLDDWVRYEAEYKGRYAHQLTDAIENCKSDEELKN
                     IIVSSILDRYGFYYTKESKKGKINRPTIETKKMLDLLNNNDFKFDSPSPRNNMLNQTI
                     NYIQKNSGLFPLLWKVDGIWGDGTYKELLEWLGDQYYNSFEPNDDHISWLNKYKALYQ
                     LEGKPWEG"
     gene            2815..3012
                     /locus_tag="U0308_002843"
     CDS             2815..3012
                     /locus_tag="U0308_002843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317794.1"
                     /translation="MNKPQVRSNINHIIKMADSVLKDENTINKRTSDSDYQKHIYTPE
                     AILANIKDSAESALKALNEYE"
BASE COUNT         1219 a          497 c          647 g          951 t
ORIGIN      
        1 aaattacgcg taacaataac gataatctgc gcaggttaga aagggttgat gtaaagatgg
       61 ctagattgcc aaatcagtat ttatttgtga aaacagtggt ggatgccgaa agattgttcg
      121 acgagaaaac aaaaagttat gttgtggttg aactaaggga tgcgtacgaa tacgctgacg
      181 gcaagataac tgacaatgtg atcggaaaga atgtaacact tatgtgtacc agagacgaag
      241 aggattatgg agtaacaaaa gctggcaaaa aaatacccaa tctcaaattc aagcaattcg
      301 atattaaaat tttgaatggg gcttttgaag taccaaaagg cacaagagtc aaaatggatt
      361 tagggaaact agaaaaggct gttggttaca aaacgacttt ggtgaacaag tatcgattgt
      421 atttaaagat ttagatgtta ttaagtagag atttaggcaa cgtcaaagaa attgacgttg
      481 tccttctcct aaaaaggagc tatgtgaatt gagagtcaca caaagtaaat taaatgggtt
      541 ctacgttttt ggttctacat tgatgttaat agttatctgg atattgcttg catatcaaaa
      601 cgagtcaatg aaccaagtgt ttaaggctgt gggcataaat tttagaatag aacttcaaaa
      661 agtaaataat atattttttg ttgctgtgac aatgataata tttcctacaa tcttgttctg
      721 gtctttaaga aataaaatct gggaaggcaa aagagcactg aagcgttatt ttctgatctt
      781 aaatttaagg aaagaaatga tagacgcaaa ttatcgagat gaaagacatg tgaccgaacg
      841 tgtagtacaa atgccaacta tcaaagtaga atttgataat aaagaaatga cttctggaaa
      901 attaattgta cgagattcat tggaatttca tgaccgtctt gcaaaagcaa catttactcc
      961 ttcactaaaa ggttttaaag tggaagattt ctatctatcg gatgatggtg attggtggat
     1021 ttataatttc tattcagtaa attcacaaat tcaagcagtc ttcgattcat tggaagaata
     1081 cttaaattgg tcaaatgaaa caacaaacaa atttcaattg agaatcgata accgtctatc
     1141 attcgattta aaacacacac ttcttgttgg tgctactaga agcggaaaaa cttatggatt
     1201 gattggatta ttgctccaaa tgataaataa attgattcat tacgaattgt tttttgcaga
     1261 cccgaagaat gaccaattaa ggaaaattgg aaactggatc aatggcaaga acacagctta
     1321 cacaaccgaa aatattatag atttgattga tagttacaat aacggcgaaa aagaccctgt
     1381 ttctctatgg aagcgcacgc agctccaata gtaaagcttc tagttctaag ttctgaagct
     1441 actaactgcc agagcgtagc gtccctgtcg gcttttgccg acagggctgg cataagggca
     1501 tagcccgtac agctccaagt ttcagaactc cgctgtttcc taataagcgg agttccaaaa
     1561 cagtgaaaaa agctcattta ttaagccaga atagttggtt taacagcatt tatctctata
     1621 ttaaacgcta taaaacatta cgcaatgttt ttagaaagga tgacaaaagt tatgactgtg
     1681 acagccgata ttgatcaatt cacattaata cttcagccaa gatctctggc atttgacttt
     1741 gatgattggg aaaagtggaa agcagaaagt ctggattaga gttattattc gggctggtag
     1801 aagaagtaga tggtggaatt ctaaaaaatt atacaaaagg ttatacgttt ttagatgctc
     1861 ccttctattt tcgcatcgcc tatcatccgt tttatgtaaa catgggtgtt tcaatatact
     1921 tttcggctta tgcgtggagt gaataccgca aaagatatga agaatatttt aacaaaccga
     1981 ttcatctaca cacatttttt cagttaatcc attcaaaaga ttattcatat agacttagtc
     2041 gtatcgatat ggtcattgat tttaaaaatg aaggggtaga tatcgcaaag atatatcgct
     2101 ctttagaggc tggaagaact gaggtgagat acaaccatga ttaatgatga gaagaaattt
     2161 aaaaagaatc aatccaagat tagggatgtt agtagcaatt ttaatgcaca aacgatctat
     2221 atcggtaaac gtggcgaaaa tatcgatgct atgcttagaa tttatgacaa aaaagccgag
     2281 cagttaggaa gtagtaaacg atgacgcact taagacatga agcagaaaaa ctagatgact
     2341 gggtacgtta cgaagccgaa tacaaagggc gctatgcaca ccaactaact gacgcaatcg
     2401 agaattgtaa gtcagatgaa gaattgaaaa acattattgt tagttctatt ttagatcggt
     2461 acggatttta ctatacaaaa gaaagtaaaa aagggaaaat aaaccgtccg actatagaaa
     2521 ctaaaaaaat gctagatctg ttaaataata atgattttaa attcgattct ccctcaccaa
     2581 gaaacaacat gttaaatcaa acaataaatt atatccaaaa aaacagtggt ttatttcctt
     2641 tgctttggaa agtagatgga atctggggag atggaactta taaagagtta ctggagtggt
     2701 tgggtgacca gtactacaat agttttgaac ccaatgatga ccatatatct tggttaaata
     2761 agtacaaggc actttaccaa ttagagggta agccttggga aggatgatat gacaatgaat
     2821 aagccacaag taagatcaaa cataaaccac attattaaaa tggctgactc tgttctaaag
     2881 gatgaaaata caattaacaa aaggactagt gattcagatt atcaaaaaca tatctataca
     2941 cccgaagcta tcttagcaaa tattaaagat agtgctgaaa gtgcattgaa agcattaaac
     3001 gaatatgaat aaaaataatg aaatggagat ggtgctttat gagcatcgat aaaaacacaa
     3061 atgactatcc ttacctttta actcgtgaac aagcgtcaga tttttttagg tatagaccct
     3121 aagtcttttg ataaatatat ccgacagcat gaagagctgg aacgtttcat gattggtagg
     3181 cacgaacgat acacaatgaa atctctagta cactttatcg aaaaacattc cgtttaaaat
     3241 atcaacagtt gataagatgc tggtttagaa atacaatata gttgtattca actagcatct
     3301 atcaacttta ttta
//
LOCUS       DASDYK010000183         3299 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.185, whole genome shotgun sequence.
ACCESSION   DASDYK010000183 DASDYK010000000
VERSION     DASDYK010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3299
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.185"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..458)
                     /locus_tag="U0308_002844"
     CDS             complement(<1..458)
                     /locus_tag="U0308_002844"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317795.1"
                     /translation="MLTVQLEGETRIQKLQSDQEKLATLLNDVEDDNTRQLLSMILKE
                     VKQEKIIEETEVKIKEIQLRLNETKEIAYQNDYKARITYLKDQLYELKRNKLAHVAEA
                     EGRFRAQLAHLDHLDFVQQQSKREKEHLRVIGIMPNVPRRQYNRKKYKEKP"
     gene            1185..2129
                     /locus_tag="U0308_002845"
     CDS             1185..2129
                     /locus_tag="U0308_002845"
                     /inference="COORDINATES: protein motif:HMM:NF013540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2317796.1"
                     /translation="MVNKFGSELKNIRKTLGISQRELSNDGIIVSKSSLQRIENDKQT
                     PSVDIASLLLQRLDISSPEMEYRLNNFSLSEKEKLINEFREIGSSANVAGINSLLIKM
                     KNFLQSNYSAYISNLILILESLTLFQEEQSFENARKIVTPIWQSLEKRDEWLYKDILL
                     ISNIIYMFDGETFLNMKNRLLFFINKYYHLGTVKKLYIITLLNSVLYMKKNNRFLEAE
                     EDLNIALKKAKEQNEHIRYLDALSLKAELLWLKGEKEFAIKIAKESFIKLYCLEQFDI
                     LEDNIKDWEKLTNVKVDTFLKPLTGVASGKCGFTTVSI"
     gene            complement(2324..2701)
                     /gene="qacH"
                     /locus_tag="U0308_002846"
     CDS             complement(2324..2701)
                     /gene="qacH"
                     /locus_tag="U0308_002846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000121134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter QacH"
                     /protein_id="HEM2317797.1"
                     /translation="MSYLYLALAIVGEIIGSSLLKASEGFSKLYPTIGVIIAFVGCFF
                     FLSLSLKTIPLNTAYALWAGLGLVLTTVISVLVWKEKLNMASIAGITLILVGVVILNL
                     FGPGHGESGHEASETITMNETME"
     gene            complement(2701..3264)
                     /locus_tag="U0308_002847"
     CDS             complement(2701..3264)
                     /locus_tag="U0308_002847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002078386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HEM2317798.1"
                     /translation="MEVIMSISKHANKKKNILIAASEIVKEEGVVKLTLEAVAQRAGV
                     SKGGLLYHFPSKEALIKGMVEDWINNYFECINTLVNNDDDNAIGKWNRAYLKSTFSDL
                     ENNNLNSALMAAMFINPDLLDEFRQRYDILHTKLITDGIDPVKITITRLSIDGLWFSE
                     IFGMAPLNEELKTQVFDELINMIQEDE"
BASE COUNT         1095 a          567 c          486 g         1151 t
ORIGIN      
        1 ggtttttctt tatatttttt tcgattgtat tgtcttcttg gaacatttgg cataatacca
       61 attactctta aatgctcctt ttcacgctta gactgttgct gtacaaaatc taaatgatct
      121 agatgagcta attgcgctct aaacctcccc tctgcttcag caacatgagc taacttattt
      181 cgttttaatt cgtataattg atcttttaag taagtaattc gcgctttgta atcattttgg
      241 tacgcaattt cttttgtttc gtttaaacgc aactgtattt ctttaatctt aacttcagtt
      301 tcttcgatta ttttttcttg ttttacttct tttagtatca ttgatagtaa ttgtcttgtg
      361 ttatcatctt caacatcatt taataacgta gcaagtttct cctgatcaga ttgcaatttc
      421 tgaattctag tttccccctc taactgaaca gtaagcatct aattccctcc cttagtttca
      481 aaatccagtg aaacaaaaaa agcgcccccc accaaagtgg ggagcgctca ccaattatta
      541 attaccaatt caagagttta ggtatagaaa gtacaggaaa agcaatcctt ttgacctttt
      601 gatttctatg taaaaatcac aaaggacgta cgttctctat agcattgtaa ctctaaaagt
      661 gatacaataa caaacggtga ggcgccaaca ctaaggtttg taaatgtgtt ggtgaggaag
      721 gaattaacct tcctagcaca ttgcagatta accgccaagt aaatctactt tgtgtgcttc
      781 gcctattaat ttttttgtct caactgaatt cgctttgact atacatcatt gcgattacgt
      841 tgtcaaatca ttttttagaa tgttttaaat cattcttttt tattttatgt ctaaattttt
      901 gaacatttta ctgtacttta gagtaaaatg cctttagtcc ttcaagcaga tttctttttt
      961 aagtataatt gttaggatag taatgaccct cacaccattg ctgtcctttc tcttatttca
     1021 gcctcctact tgaccatgtg acaagactgt tacaattaca ctaactactg ctaaagttaa
     1081 aaacattttt tatgcacctc cttatatgga ttctagcata cacattatta agattgagaa
     1141 aaagcaccat atccggtaca aaaattttag aaaggtagag aaggatggta aataaattcg
     1201 gatctgaatt aaagaatatt aggaaaacat taggcataag ccaacgtgaa ttatctaatg
     1261 atggtataat tgtttctaag tctagtttac aacgaatcga aaatgacaaa caaactccat
     1321 ctgtagatat agcaagtttg ttactacagc gattagatat aagtagtccc gaaatggaat
     1381 atagactgaa taatttttca ttgagtgaaa aagaaaaact aattaacgaa tttagagaaa
     1441 ttggatcttc tgcaaatgtc gctggtataa attcattatt aatcaaaatg aagaatttct
     1501 tacaatcaaa ttatagtgct tatatttcga atcttatttt aatactggaa tccttaactt
     1561 tattccaaga agaacagtct ttcgaaaatg ccagaaaaat agttacaccc atttggcaat
     1621 ctttagagaa acgtgatgaa tggttatata aagatattct tctcatatca aatattatat
     1681 atatgttcga tggagagacc tttcttaata tgaaaaaccg tcttttgttt tttattaaca
     1741 aatattacca tttaggaacc gtaaaaaaac tgtatattat cacactttta aacagtgtcc
     1801 tttacatgaa aaaaaataat cgcttcttgg aagctgaaga agatctcaat attgctctaa
     1861 aaaaagccaa agaacaaaat gaacatatca gatacttaga tgcattatca cttaaagcag
     1921 agctgctttg gttaaaaggt gagaaagaat ttgctataaa aattgcaaaa gagtctttta
     1981 ttaaattata ttgtttagaa caatttgata ttttagaaga taatataaaa gactgggaaa
     2041 aattaacaaa tgtaaaggtt gatacatttt taaaaccact tacaggggta gcgtcaggga
     2101 aatgcggatt tacaacggta agcatttgat acaagtctta tgagacagtc agaagtcatt
     2161 taaaacgcta atttcattat gtctcaataa actctactct attggaattg tgaagtgata
     2221 cacttaaact aacgtacgca ggtttgttga ataaggactt caaaaaatac ccttaattaa
     2281 gctaaaaagt ccttctcttt attaagaagg acttttttat gtgttattcc attgtctcat
     2341 tcattgtaat agtttcgctt gcttcatgac cagattctcc atgtcctggt ccaaacaaat
     2401 tcaatattac aactcctaca agaatcagtg ttattcctgc aatgctagcc atgttaagtt
     2461 tttccttcca aactaaaact gaaattactg tagtcaaaac aagtcctaaa cctgcccata
     2521 atgcatatgc agtgtttaag gggattgttt ttagcgacaa ggataaaaag aaaaaacaac
     2581 caacgaaagc tattattacc cctattgtag gatagagttt tgaaaagcct tcagatgctt
     2641 ttaataggga agagccaata atctccccca ctattgcaag tgctaaatat agatatgaca
     2701 ttattcgtcc tcctgaatca tgtttattag ttcatcaaaa acttgtgttt ttagttcttc
     2761 atttaatggt gccattccaa atatttctga aaaccaaaga ccatctatgg ataatcttgt
     2821 aattgttatt ttgacaggat caattccatc agttattaac tttgtatgca aaatatcgta
     2881 tctctgccgg aattcatcta ataaatctgg attaataaac atagcagcca ttagtgcgga
     2941 atttagatta ttgttttcta aatcggaaaa tgtagattta agataagccc tattccattt
     3001 tcctattgcg ttatcatcgt cgttattaac taacgtatta atgcattcga aataattatt
     3061 tatccaatct tccaccattc ctttaattaa tgcttccttg ctaggaaaat ggtataataa
     3121 tccaccttta ctcacgccag ctctttgggc gactgcctct aatgtgagtt tgacaactcc
     3181 ttcttctttt acaatttcag atgcagcaat caatatattt tttttcttat tagcatgctt
     3241 tgaaatagac ataataacct ccataactta gatacatata atataccgtc tggacggtt
//
LOCUS       DASDYK010000184         3284 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.186, whole genome shotgun sequence.
ACCESSION   DASDYK010000184 DASDYK010000000
VERSION     DASDYK010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3284
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.186"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            7..993
                     /locus_tag="U0308_002848"
     CDS             7..993
                     /locus_tag="U0308_002848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317799.1"
                     /translation="MIRFDNVSKKYSDDKTAAVNNVTLDIKDGEFFVFIGPSGCGKTT
                     TLKMINRLIPLTTGTIYINEKRISDYDIHELRWDIGYVLQQIALFPHMTIEENIAIVP
                     ELKKWSKEKIHDRITELLDSVGLDPESYRHRKPAELSGGEQQRVGVVRALAADPGIIL
                     MDEPFSALDPISRQRLQQDISALQKKIKKTIVFVTHDMQEALALGDRICVMQGGEIVQ
                     VATPQEIMKNPENDFVKDFLASGHAFNTPILEANFTVKDLIEADLFYSYQTSDGTLGI
                     SSAEPVENLVRRIAEEQSIPVTDEAGNFIGTVSNKHVMQFLARHLESSGELV"
     gene            990..2504
                     /locus_tag="U0308_002849"
     CDS             990..2504
                     /locus_tag="U0308_002849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease/substrate-binding
                     protein"
                     /protein_id="HEM2317800.1"
                     /translation="MNTLIDTFTVRKDELFTALVQHIQISFVSLFIAVLIALPLGIYL
                     TRHKRLAEPIIQVAAIFQTIPSLALLGLLIPLVGIGIVPAIIALVIYALLPILRNTYT
                     GIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIMAGIRTAMVLIIGTATLAALIG
                     AGGLGDLILLGIDRNDNSLILLGAIPAALLAILFDFLLRFLEKASFKSTIITISAGIL
                     LTAAIIVVPYFASDKKEITIAGKLGAEPEILINMYKLVIEDETDLKVNVKPNMGKTSF
                     VFNALKSGDIDIYPEFTGTVLETFLKENAKTHDPEEVYTQARDGLAKDFNMSYLKPMK
                     YNNTYALAVSPEFAKENNLEKISDLGPVSDQVKAGFTLEFKDRSDGYKGIQDKYGLTF
                     SNLKTMEPKLRYNAIKSGDINLLDAYSTDSELAQYKLKVLEDDQQLFPPYQGAPLMLT
                     KTLEKYPELKKPLNKLAGKITDDEMRKMNYEVNVNGKSAYTVAKDYLKDQGIIK"
     gene            complement(2540..>3284)
                     /locus_tag="U0308_002850"
     CDS             complement(2540..>3284)
                     /locus_tag="U0308_002850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317801.1"
                     /translation="FTIIIYTKLSKVAGVTVLNSQEEPATVKEAEAVVNRIQKYNFYF
                     EYLGKRAHVIKERDSIIAEKIEQTQLILNDNTIFGEKMQPTIDELNLAMEVYKQQQRK
                     MDVYQEDITLLNQKIKMQGEILEEDWESAENLSIAFAKAAYAQSIYLEATRKNRKQLA
                     KWFHLHQKELPTDKQKALSKMVSVLSDTNAGLVFDQIISLRPLLEEGLMLDHEQSLTQ
                     RAAEFNKEFETHCRFYKPNINKVKNLIRQ"
BASE COUNT         1044 a          567 c          613 g         1060 t
ORIGIN      
        1 gaaaaaatga ttcgttttga taatgtatcc aaaaaataca gcgatgataa aacagcagca
       61 gtaaataatg taactttgga cataaaagac ggcgagttct ttgttttcat cggaccgagt
      121 ggttgcggga aaacaacaac actaaaaatg attaatcgct tgattccact gacaactgga
      181 accatttata ttaatgaaaa gcgaattagt gattatgata ttcatgaact tcgctgggat
      241 atcggctatg ttttacaaca aattgcgctc tttcctcaca tgactattga agaaaatatc
      301 gctatcgttc cggaattaaa aaaatggagc aaggagaaaa ttcatgaccg gattacggaa
      361 ttattagata gtgttggctt ggatcctgaa agttatcgtc atcgcaaacc agctgaatta
      421 tctggtggtg aacagcaacg ggttggtgtt gttcgtgccc ttgcagcaga tcctggaatt
      481 attctgatgg atgaaccttt tagtgcactt gatccgattt ctcgccaacg tttgcaacaa
      541 gatatttctg cgcttcaaaa gaaaatcaag aaaacgattg tatttgttac ccatgatatg
      601 caagaggctt tagcgcttgg tgacagaatt tgcgtaatgc aaggcggtga aattgtccaa
      661 gtagcaacac cacaagaaat tatgaaaaat ccagaaaatg acttcgttaa agatttctta
      721 gcatctggac atgctttcaa tacgccaatt ttagaagcaa actttacggt gaaggactta
      781 atagaagctg acctgtttta ttcgtatcaa actagtgatg gcacacttgg aatttcatca
      841 gcggagcctg tcgaaaacct tgttcggcga atcgcggaag aacagtcaat tcctgtcaca
      901 gacgaagcag gtaattttat cggtacagtt tcaaataaac atgtgatgca attcttagcg
      961 cgtcatctgg aaagttcagg tgagcttgta tgaatactct tatagataca tttactgtcc
     1021 gtaaagatga actattcaca gctttagtac aacatattca aatttccttt gtctctcttt
     1081 ttatagcggt gttaattgcc ttacctcttg ggatttattt aactagacat aagcgtctcg
     1141 ctgaaccaat tattcaagta gccgctattt ttcaaacaat tccttctctg gcactacttg
     1201 gtttgttaat tccgctcgtt ggtattggga tagttccagc gattattgcg cttgttattt
     1261 acgccctctt acctatttta aggaatacat atactgggat aaaagaagtc gacccagccc
     1321 ttgttgaagc ctcacgcgca atgggaatga acaaatggaa aagattatac aaagtacaac
     1381 ttcctcttgc tatgccagta attatggctg gtattcgtac agcgatggta ttaatcatcg
     1441 gtacagcgac acttgctgcc ttaattggtg caggtggact cggggacttg attctactag
     1501 ggattgaccg caatgataat agtttaattc tattaggtgc aattccagca gcgttactag
     1561 cgattttgtt tgatttctta ctacgtttcc ttgaaaaagc atcttttaaa agcacaatta
     1621 ttacgatttc agcaggtatc ttattaactg ccgcaattat cgtcgttcct tattttgcgt
     1681 ctgataaaaa agaaattacg attgcaggta aattaggtgc agaaccagaa attttgatta
     1741 atatgtacaa actagttatt gaggacgaaa cagatttaaa agttaatgtg aagccgaata
     1801 tgggtaaaac gagtttcgtt tttaatgcat taaaatcagg tgatattgat atttatcctg
     1861 aatttacagg aacagtgcta gagacattct taaaagaaaa tgcaaaaaca catgatcctg
     1921 aagaagtgta tacgcaagca cgtgatggtt tggcaaaaga ttttaatatg tcttatttaa
     1981 aaccgatgaa atataataac acctatgctc ttgcggtttc accagaattt gcaaaagaaa
     2041 ataatttaga aaaaatatct gatcttggcc cagtatctga ccaagtaaaa gctggattca
     2101 cactggagtt taaagaccgt tcggatggtt ataaaggcat tcaagataaa tatggtctca
     2161 cattctctaa cctgaaaaca atggagccaa aactgcgata taatgcaatt aaatctggag
     2221 acatcaattt actagatgct tactcaacag atagtgaact cgcccaatat aaattaaaag
     2281 tcctagaaga cgatcagcag ctcttccctc cttatcaagg tgcaccgctt atgctgacaa
     2341 aaacattaga aaaataccca gaactgaaaa aaccattaaa taaactagct gggaaaatta
     2401 cagatgatga aatgcgtaaa atgaattatg aagtgaatgt aaatggcaaa tcagcttata
     2461 cagttgccaa agactatttg aaagatcaag gtattattaa ataaaaaagc gaagtggttt
     2521 ttacgccact tcgctttttt tattgtctaa ttaagttttt gactttatta atgtttggtt
     2581 tataaaaacg acaatgtgtt tcaaattctt tgttgaattc agcagctctt tgggttagtg
     2641 attgctcgtg atcaagcatc aagccttctt caagtagtgg tctaagtgaa ataatttgat
     2701 cgaaaacaag accggcattt gtgtcactta gaacagatac cattttactt aacgcttttt
     2761 gtttgtcagt aggtaattct ttttgatgaa gatggaacca ttttgctaat tgtttgcgat
     2821 tttttcgggt tgcttctaaa taaatacttt gcgcataagc tgctttagca aatgcaatcg
     2881 ataaattttc agcggattcc cagtcttctt ctagaatttc accttgcatt ttgatttttt
     2941 gattgagtag agtaatatct tcttgataaa catccatttt gcgttgttgt tgcttataaa
     3001 cctccatcgc taaattaagt tcatcaatag ttggctgcat tttttcacca aaaatagtat
     3061 tatcatttaa aatcaattgt gtttgctcta ttttttcagc aataatgcta tcgcgttctt
     3121 tgattacatg tgcgcgtttg cctaagtatt caaaatagaa attatacttt tgaatgcgat
     3181 taactactgc ttctgcttct ttcactgtgg ctggttcttc ttgtgaattt aatactgtca
     3241 caccagctac tttacttaat ttagtataaa taataattgt gaaa
//
LOCUS       DASDYK010000185         3265 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.187, whole genome shotgun sequence.
ACCESSION   DASDYK010000185 DASDYK010000000
VERSION     DASDYK010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3265)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3265)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3265
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.187"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(173..784)
                     /locus_tag="U0308_002851"
     CDS             complement(173..784)
                     /locus_tag="U0308_002851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM2317802.1"
                     /translation="MKNYSMKVFVSVAVLGTLAFILMMLQFPLLPSAPFLKLDFSDIP
                     ALIGGLLFGPLAVILVELIKNVLLYIVSGSPVGVPIGEISNFINGIVYVLPIYYLFHW
                     FRSTKGMVFSTAIGTLVMTVVMSIFNYFILLPFYIKLGGLPADTDVAWLVTYAIIPFS
                     LLKGVIVSAVFLLLYSRLKKWIAKNQTVKERRKFEKKQQEVSH"
     regulatory      complement(974..1096)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            complement(1226..1744)
                     /locus_tag="U0308_002852"
     CDS             complement(1226..1744)
                     /locus_tag="U0308_002852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEM2317803.1"
                     /translation="MEKRQTKFCKESLVIKTSRVFPSDTNNHNTLFGGRLMTYIDDTA
                     SISASRHCRTEIVTASTDSVDFLKPIKNDHSVCLESYVASTGRSSMEIFVKIIAENLK
                     TGERYLAATSFLTFVALDADGKTVEVPLVKPETEEQKRIHAGAEARSIARKIRLKENQ
                     SLAESLSTDIPW"
     gene            complement(1760..>3265)
                     /locus_tag="U0308_002853"
     CDS             complement(1760..>3265)
                     /locus_tag="U0308_002853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEM2317804.1"
                     /translation="QSPDTISSASANKLIQDKTLDKALEKDNSVTMKYNFKTEKSSLP
                     VEISAQKFKLANGETGVVYVYQSYHDILKVNEKTMSTLIISGIIAIVITSILSFVFSS
                     RMAFPLREMKKIAIAVSKGNFDNRVPTYTHDEIGELGVAFNDMAKQLKYNVSALRQEK
                     EQLSNILVGMADGVIKFSVDKTIILSNPPAEEFLHNWFFSPENTEKVLIPVALNELLN
                     DTLEKKESQVGEITFADHTYVAILTLLYTGEHVRSVVAVIRDMTEEKQLEKMKSDFVN
                     NVSHELRTPISMLQGYSEAIIDGVAQSDEEVREFAQIIYDESLRIGRLVNDMLDLARM
                     EAGFNQMDNQKLPLAPLLRKVISNFDVLAKENYVELGLELETPDLEYSYDPDRMEQVL
                     INLIMNAIRHTGKEGYDGKVILKQTIDEARSNLVITVSDNGSGIAEEDIPYLFERFYK
                     VDKARKRGKAVGTGIGLAIVKNIVEAHNGKISVESELGKGSDFIITLPLYK"
BASE COUNT         1053 a          672 c          509 g         1031 t
ORIGIN      
        1 tagtcgcaaa acaccttatt aaaaaaaaca gcactattcg caaattcata caaatatttg
       61 tcacatcaaa agcacgtttc agacacattt aagacacaat taattcgcaa aagctgccat
      121 tttagaagaa aaataaaaaa ccactcttta ttatagagtg gttttggata aattaatggc
      181 taacttcttg ttgctttttt tcaaatttgc gccgttcttt tacagtttgg tttttagcaa
      241 tccatttttt tagtctagag tatagtaaca agaatacagc actaacaatg actcctttta
      301 ataaactgaa tggtataatc gcatatgtga ctaaccaagc aacatctgta tccgccggaa
      361 gtccaccaag tttaatgtaa aatggtaata aaatgaaata attaaatatc gacatgacga
      421 ctgtcattac taacgttcca attgctgttg aaaacaccat tccttttgtt gaacgaaacc
      481 agtgaaataa ataataaatc ggtaatacat aaacaatacc attaataaaa ttggatattt
      541 ctccaatcgg aactccaact ggactacctg acacaatata aagtagcaca tttttgatta
      601 gttctactaa aatcactgcg agtggtccga ataataagcc accaatcaaa gctggaatat
      661 cactaaagtc aagctttaaa aatggtgcac tcggtagtag cggaaattgt agcatcatta
      721 aaataaatgc taaagtacca agaaccgcca cacttacaaa aaccttcatt gaataattct
      781 tcattgtcat ttctcccttg atgttcacca agaagcgagt gacatcacta gacgaatgca
      841 acccaagcaa ataaaaaacc tcaactgaaa agagttgagg gagagtttgt gaatgaataa
      901 acaagaaccg gatactcaaa taagcatcac agcttgctaa cacatgctcg tgaagacaaa
      961 cgaaaaggtc tgccaacatc ttctcccatc cagactatac tgtcggtcct ggaattacac
     1021 cagagtcaac tgctaaaaaa gcagatcgtg gactttaacc accggtcggg aattgcaccc
     1081 tgccccgaag atgaacgaat attttattac aattttcatt ttaccatgaa aaaaattttt
     1141 ggcaagcact tttgtatatt ttttcacgta agcgctttct atctaaatta aataaaaact
     1201 agctgcttag ctagttttta ttaattcacc atggaatatc tgttgataat gattccgcta
     1261 atgattggtt ttcttttaaa cgaattttac gagcaatgct tcttgcctca gcacccgcgt
     1321 ggattctttt ttgttcttct gtttctggtt taacgagtgg cacttctaca gttttaccat
     1381 ctgcatccaa cgctacaaat gttaaaaagg atgtcgccgc taagtaacgt tctcctgttt
     1441 tcaaattctc cgcaataatt ttaacgaaga tttccattga acttctgccc gttgaagcta
     1501 cataagactc taagcaaaca gagtgatcat ttttaatcgg ttttaagaaa tccactgagt
     1561 ctgtcgatgc agtgacaatt tccgtacgac aatgacgaga ggcgctgata gaagccgtat
     1621 catcaatata agtcatcaat ctaccgccaa aaagggtatt atgattattc gtgtccgacg
     1681 ggaaaacccg gcttgtttta attactagtg attctttgca aaattttgtt tgtctttttt
     1741 ccatgttttt cgctccaatc tatttataga gaggcaaagt gataataaaa tcagatcctt
     1801 tacctaattc gctttcaacc gaaattttcc cattatgtgc ttctacaata ttcttaacga
     1861 ttgcaagacc aatacctgtt ccaactgctt ttccgcgttt ccttgcttta tccactttat
     1921 aaaaacgctc aaacagatat gggatgtctt cttccgcaat cccactaccg ttgtcagata
     1981 ctgtgattac aagattgctt ctagcttcat caatggtttg ttttaaaatt acttttccat
     2041 catagccttc ttttccagta tgacgaatag cgttcataat taaattaatt aatacttgct
     2101 ccatccggtc ggggtcatag gaatactcta aatcgggagt ttcaagctct aagccgagtt
     2161 ccacataatt ctctttcgca agaacgtcaa aattagaaat aacttttcgc agcaatggag
     2221 cgagcggtaa tttttgatta tccatttgat taaaaccagc ttccattcta gcaaggtcta
     2281 gcatatcatt aaccaaacgc ccaatacgaa gggattcatc gtaaataatt tgtgcaaact
     2341 cccgcacttc ttcatccgac tgagcaaccc cgtcaataat cgcttcacta taaccttgta
     2401 acatcgaaat cggcgttcta agttcatgcg aaacattatt aacaaaatcg cttttcattt
     2461 tttcaagttg tttctcttcg gtcatatcgc gaataaccgc aacgacacta cgcacatgtt
     2521 cccctgtata caaaagtgtt aaaatggcaa catacgtatg gtcagcaaac gtaatttctc
     2581 cgacttgaga ttctttcttt tctaacgtat cattcaataa ttcatttaaa gccactggaa
     2641 tgagcacttt ttcggtattt tcaggtgaga agaaccaatt atgtaaaaat tcttctgccg
     2701 gcggattact aagaatgatc gttttatcca cactaaattt aataacacca tcagccatcc
     2761 caactaaaat attggatagc tgttcctttt cttgcctaag ggcgctaaca ttatacttca
     2821 attgctttgc catatcgtta aaagctactc cgagttcacc aatttcatca tgcgtataag
     2881 ttggtacgcg attatcaaag ttcccttttg aaacagcaat cgcaattttt ttcatttcac
     2941 gaagcggaaa agccatgcga gaagaaaaga cgaaagacaa gatagacgta ataactatcg
     3001 caataatacc cgaaataatc aaagtactca tcgttttttc gttcactttt agaatatcat
     3061 ggtaagactg ataaacgtaa acaacaccag tttcaccgtt cgctagtttg aatttctgtg
     3121 cagaaatttc aaccggtaag gagctttttt ctgttttaaa attatatttc atcgttacac
     3181 tattatcttt ttctaaagct ttatctaatg tcttatcttg aattaattta ttagcagatg
     3241 cactagaaat ggtatctggt gactg
//
LOCUS       DASDYK010000186         3251 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.188, whole genome shotgun sequence.
ACCESSION   DASDYK010000186 DASDYK010000000
VERSION     DASDYK010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3251
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.188"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..326
                     /locus_tag="U0308_002854"
     CDS             <1..326
                     /locus_tag="U0308_002854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase SNF2"
                     /protein_id="HEM2317805.1"
                     /translation="RSEEALQQAFPNVKITTFAKSSYGLNLQFYNQIIYFDKTFDYSQ
                     RDQSERRIYRTGQTQDCYYHDLSGNVGLDSLIDTNISKKTSLLQEFKKELSQKNSFEV
                     IMDAF"
     gene            316..1620
                     /locus_tag="U0308_002855"
     CDS             316..1620
                     /locus_tag="U0308_002855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
                     /protein_id="HEM2317806.1"
                     /translation="MLSRTVFDASQERMEAIFSEFDNIIVSFSGGKDSAVMLHLMIDY
                     MRKNNIRKKIYVYHLDYEGQYSATTDFVTEMLTTNLDIIEPLWCCLPIAAQSAVSMFT
                     DHWKPWEKTKQNIWVRDMPTFPHVINEDNAPFDFDFENLWDYEFNKKIINWLHTKNNA
                     QKTIALIGIRQQESLNRYNAIHKKERMYKTYNWTTEISKNIYNAYPIHDWQVEDIWVA
                     NAKFNWSYNKIYDLFYHAGLTVHEMRVASPFNDAATESLKLYRVIEPALWSKLVGRVN
                     GANFTAIYGGTSAMAWKEIKLPKNHTWKSYLEFLLTTLPSYTRERYLKKFKTSITYWT
                     EKGGALKVEIVEELKNLDIQADFLGKPQNNRVYTNPMEIVRFKEYPDDLKIKEFASVP
                     TYKRMCIAILKNDYTCKYMGFGQTKLELEKRKNALEKYNNIL"
     gene            1630..2136
                     /locus_tag="U0308_002856"
     CDS             1630..2136
                     /locus_tag="U0308_002856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB-like nuclease domain-containing protein"
                     /protein_id="HEM2317807.1"
                     /translation="MNYKSPVYSVTPIHYTKLQANNYNPNTVPATELKLLEKSIWEDG
                     FTQPIVCYPLEDSDKYEIIDGFHRYTIMRTSKRIRERENEFLPVVILEKDTVNRMAST
                     IRHNRARGFHNVELMSNIVSELVDSGMSDSWIMKNIGMDANEILRLKQVSGLAHLFLD
                     KEFSHTSD"
     gene            2158..2889
                     /locus_tag="U0308_002857"
     CDS             2158..2889
                     /locus_tag="U0308_002857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2317808.1"
                     /translation="MKENKYDDKHFFEQYSQMPRSKEGLKAAGEWHELKKMLPDFNQK
                     TVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAI
                     EPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDE
                     TGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEPAP
                     ELKDLPEMQDEYRRPMMLLISATKQ"
     gene            complement(2938..3177)
                     /locus_tag="U0308_002858"
     CDS             complement(2938..3177)
                     /locus_tag="U0308_002858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YneF family protein"
                     /protein_id="HEM2317809.1"
                     /translation="MWIYILVGIICLLAGLAGGFFIARRYMMSYLKNNPPINEQMLQM
                     MMAQMGQKPSQKKINQMMSAMNKQQEKEKPKKTKK"
BASE COUNT         1133 a          586 c          568 g          964 t
ORIGIN      
        1 gacgttcaga agaggcattg cagcaagcat ttccaaatgt aaaaattact acttttgcca
       61 aatcttctta cggactcaat ttgcaatttt ataatcaaat tatttatttt gataaaacgt
      121 ttgattattc tcagcgtgat caatcagaaa ggcggattta cagaactggg caaacacaag
      181 actgctacta tcatgattta agcggtaatg tcggtctgga ttctcttatt gatacaaata
      241 tttctaagaa aacaagctta ttgcaagaat ttaaaaaaga actatcacaa aaaaattctt
      301 ttgaggtgat aatggatgct ttctagaaca gtctttgatg cttcccaaga aagaatggaa
      361 gcgatttttt ctgaattcga taatattatt gtgtcgtttt cgggtggtaa agatagcgca
      421 gtaatgctcc atctcatgat tgactacatg cggaaaaata atattcgcaa gaaaatatat
      481 gtatatcatt tagattatga aggtcaatac agcgctacaa ctgattttgt tactgaaatg
      541 cttacaacta atttagatat catcgaacca ctttggtgtt gtcttcccat cgcggcacaa
      601 tcagctgttt cgatgttcac cgaccactgg aaaccgtggg aaaagaccaa gcaaaacatc
      661 tgggttagag atatgcccac ctttccacac gtgattaatg aagacaatgc cccgtttgac
      721 tttgattttg aaaacctttg ggattatgaa tttaataaaa aaataattaa ctggttacat
      781 actaaaaata acgcccaaaa aaccattgct ttgattggta taagacaaca agaatctctt
      841 aatcgctata acgcaattca taaaaaagaa cgaatgtata aaacatacaa ttggacgacc
      901 gaaatttcca aaaacattta caacgcctat ccaattcacg attggcaagt agaagatata
      961 tgggtcgcaa atgcaaagtt caattggtct tataataaaa tttatgattt attttatcat
     1021 gctggcctaa ctgtgcacga gatgcgtgtc gccagtcctt ttaacgatgc tgctacagaa
     1081 agtcttaaac tgtacagggt catcgaacct gcgctttggt ccaaattagt cggccgggtg
     1141 aatggcgcca atttcactgc catatacggt ggcacttccg caatggcttg gaaagaaatt
     1201 aaactaccta aaaatcatac ttggaaatca tatttggaat ttttactcac aactttacca
     1261 agttacacta gagaacgcta tttaaaaaaa ttcaaaacaa gtattaccta ttggaccgaa
     1321 aaaggtggtg ctttaaaagt agaaattgta gaagaattaa aaaatttaga tatacaagca
     1381 gacttcctag gtaaaccaca aaataaccga gtatatacta atccaatgga aatcgttcgt
     1441 tttaaggagt atccagacga tttgaaaatc aaagaattcg caagcgttcc tacctacaaa
     1501 cgcatgtgca tagcaatatt gaagaatgat tatacctgca aatatatggg attcggccaa
     1561 acaaaattgg aattagaaaa aagaaaaaac gcattagaga aatataataa tattttatga
     1621 ggtgaactaa tgaattacaa gagcccagta tatagcgtta ctcccattca ctacacaaaa
     1681 ttacaagcaa ataattataa tcccaacact gtccccgcaa ccgaactcaa actacttgaa
     1741 aaatcaattt gggaagatgg gtttacgcaa ccaattgttt gttatccctt ggaagacagc
     1801 gataaatatg aaataataga tgggttccac cgttacacta tcatgagaac ctctaaacga
     1861 attcgagaac gagaaaatga attcttacca gtagtcatct tagaaaagga caccgtgaat
     1921 cgaatggcct ctacaatacg tcataatcgt gcgcgcggat ttcataatgt cgaattaatg
     1981 tccaacattg ttagtgaact tgtagatagc gggatgtccg atagttggat tatgaaaaat
     2041 attggaatgg atgctaatga aatcttacgc ttaaaacaag tgagcggact tgctcacctc
     2101 ttcttagata aagaattcag tcacacatct gattaattga tgaaaagagg tttaataatg
     2161 aaagaaaata aatacgatga caaacatttt ttcgaacaat atagccaaat gcctcgctcg
     2221 aaagaaggat taaaagcagc tggtgaatgg catgaactta aaaaaatgct tcctgatttt
     2281 aaccagaaaa cagtccttga tttagggtgt ggctttggat ggcactgtat ctatgcagct
     2341 gaacatggtg caaaaaaagt acttggtatc gatttatccg aaagaatgct tactgaggct
     2401 aaacgaaaaa ctacatcgcc agtggtttgt tacgagcaaa aagccataga agatatagct
     2461 attgaaccag atgcatacaa tgttgttctg agttcccttg cacttcatta cattgcttct
     2521 tttgacgaca tttgtaagaa agtctatatt aacctaaaat ctagtgggtc tttcattttc
     2581 tctgtagaac atccggtatt tacggcagat ggaagacaag attggtatac ggatgaaaca
     2641 ggtaacaaat tacattggcc cgttgaccga tattttaatg aatctatgcg aacaagccat
     2701 tttcttggag aagatgtcca aaagtatcac cgaacagtta ctacttacat ccaaacatta
     2761 ctgaaaaatg gctttcaaat taatagtgtt atcgaaccgg aaccagctcc tgaattaaaa
     2821 gatttacccg aaatgcaaga cgaataccgc cgcccaatga tgctactcat ttcagcaacg
     2881 aaacaataat aaaaaacccc ttctaaatca atagaagggg tttactttgt taaaatatta
     2941 tttcttagtt ttctttggtt tttctttttc ttgctgtttg ttcatcgcac tcatcatttg
     3001 attgattttc ttttgtgatg gtttttgacc catttgtgcc atcatcattt gtaacatttg
     3061 ttcgttaatt ggcggattgt tttttaaata gctcatcatg taacgtcttg caataaagaa
     3121 tcctcccgca agaccagcta gtaaacaaat aatgccgaca agaatgtaaa tccacatagt
     3181 ctcttttctc ctccttgaaa caaaatcctc ttttattgta cttgatttat attaaacaga
     3241 caatactttt c
//
LOCUS       DASDYK010000187         3249 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.189, whole genome shotgun sequence.
ACCESSION   DASDYK010000187 DASDYK010000000
VERSION     DASDYK010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.189"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            108..341
                     /locus_tag="U0308_002859"
     CDS             108..341
                     /locus_tag="U0308_002859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317810.1"
                     /translation="MYNLFDDILEHSIVLADALRRNWSIEILFLKNNHHVRYKYVVPV
                     HIDNEKHIVQLERFDERIIDINIEDIVFCEVMT"
     gene            338..544
                     /locus_tag="U0308_002860"
     CDS             338..544
                     /locus_tag="U0308_002860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317811.1"
                     /translation="MRPYSFNDFRYICYVEGKDKAIEKLFASLRTDKEIAILNKRIQK
                     DTINIENVYKEYLRGINGAEQNNI"
     gene            868..2391
                     /locus_tag="U0308_002861"
     CDS             868..2391
                     /locus_tag="U0308_002861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LXG domain-containing protein"
                     /protein_id="HEM2317812.1"
                     /translation="MSRIDIGEIQAFLYQLRAANEPGRKTIQSIKAAVTKYVGDNSLK
                     GKAVDASKNYYQMTYFPLCDAIIEAMDESEERLGQYIQDFHAEVDSSPDAKIDADGLY
                     ELGKMIDRIESKKEALAQRMNSGTEGQMQNYRSQLAIAYKQENILEKYLSFEQSHASF
                     FDHLIDLVQAVQQTIRELQSNIQFNSQTGTYDLSKLNHATVSHMQQALNKARGIKEDI
                     IKELQDYTVLAVVYLDSNGKEQVMWLLERDGLGVENAELKAYLEKNGKYLNPEDYSII
                     TNEDLNKKINKAWRDGVYYLNGNKYDGLTGGILSTSAYVEAGKGFIDKSGLADVVLGL
                     GLSTAAIRGSVTFGKKNKLKGYDYLDDLLGDLNNKVKIKKYDSAESVNKYWHQQNYDQ
                     PPYTPKTPVQDLELLVETKFVRVYDGGSSKLHGGWLMKAEDIKGLTPTQIKDKFALPN
                     IPKFVGEVTLPKGSNIRMGEVNPLFENKGGGIQFDLKGQFIGEFKELGKISEWGGLK"
     gene            2373..2750
                     /locus_tag="U0308_002862"
     CDS             2373..2750
                     /locus_tag="U0308_002862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317813.1"
                     /translation="MGRIKVTINAEYIDNKLTAFGKSIEFKNKIVELKENDNCLFVRL
                     LVVPGQELNENTLSNVYAINKLGEIQWQIKNVAPKGNNVYICAPLVGMDIEENDLFVT
                     DFMGRRFEVNQENGELNQVRIVK"
BASE COUNT         1216 a          439 c          673 g          921 t
ORIGIN      
        1 atttgcttta acaatgctgt gaaaagtaat ttgatataag ttatatccta tttacctctt
       61 gattcaaaga acgtttgttc gtataatgtg tacaagaggt gacgaaaatg tataacttat
      121 ttgatgatat tttagaacat tcaatagtat tagcagacgc gctcaggcgc aattggtcga
      181 tagaaatatt gtttttaaag aataatcatc atgtgcgtta caagtatgta gttccagtcc
      241 acattgataa cgaaaaacac attgtgcagc ttgaaagatt tgacgaacga ataattgaca
      301 ttaatataga agatattgtt ttctgcgagg ttatgacatg agaccatata gctttaatga
      361 ttttagatac atctgctacg tagaaggaaa agataaagct atagaaaaac tatttgctag
      421 tttgcggaca gacaaagaaa ttgctatact aaacaaaaga atacaaaagg atacaattaa
      481 tatagaaaat gtttataaag aatacttgcg gggcataaat ggggcagagc aaaacaacat
      541 ataaatactt atagcttctt gtaacagctt ttaaaaaggc ataaaccgcg taacaaagcc
      601 gatttcttcc cgtgaatgcg tataactgct caacacaaaa ccaactctta atcagcgggt
      661 cgggggttcg aaaccctcac aacccataaa aaacaaacgc cagtgactgt taaagtcgtt
      721 ggtgttttgt cgtttttacg ggcaaaatgt taataatttc aataataagc tgatttcttt
      781 ttgattattt atcgattaca tagaaaataa gtggaatttc aaagtatcta ataatttact
      841 acatgatata caaaaggagt tgtttcagtg agtagaattg acatcggaga aatacaagct
      901 tttttatacc agctacgtgc agccaatgaa ccaggaagga aaactatcca atctatcaaa
      961 gcggccgtga caaagtatgt gggagataat agtttaaaag gaaaagcagt tgatgcatcg
     1021 aaaaattatt atcaaatgac ttatttccct ctctgtgatg caataatcga agctatggac
     1081 gaaagtgaag aaagattggg gcagtacatc caagattttc atgccgaagt tgatagctca
     1141 ccagatgcca aaatcgatgc ggacggttta tatgaactgg gtaaaatgat tgaccgaata
     1201 gaaagcaaaa aagaagcttt agcacagcga atgaacagtg gaacagaagg gcaaatgcag
     1261 aattatcgtt ctcagttagc tattgcgtat aaacaggaaa acattctcga gaaatatttg
     1321 tcatttgaac aaagccacgc tagctttttt gaccatttga ttgacttagt tcaagcagtt
     1381 cagcagacca tccgcgaact ccagtcgaat atccagttca acagccagac aggcacttac
     1441 gatctaagta agctgaatca cgctacagtg agccacatgc aacaagcttt aaataaagca
     1501 cgaggaataa aagaagatat tataaaagaa ctacaagact acacagtgct tgcagtggta
     1561 tatttagata gtaatggaaa agaacaggtg atgtggttat tagagcgaga cggcttagga
     1621 gtggagaatg ccgaacttaa agcctattta gaaaaaaacg gaaaatatct taatccagaa
     1681 gattattcga ttattactaa tgaagacttg aataagaaaa tcaataaagc ttggcgagat
     1741 ggtgtttatt atctaaatgg taacaagtat gatggactaa ctggcggtat tttatctacc
     1801 tcggcatatg ttgaagctgg gaaagggttt atagataaga gtgggttagc ggatgttgtg
     1861 ctggggcttg ggttgagtac ggctgcgatt agagggagtg tgacatttgg taagaaaaat
     1921 aaactgaagg gttatgatta tttagatgac ctgttgggcg atttaaataa taaagtgaaa
     1981 ataaagaagt atgactctgc tgaaagtgtc aataaatatt ggcatcaaca aaactatgat
     2041 caacctccat atacacctaa aacacctgtc caagatttag aacttttggt agaaactaaa
     2101 tttgtcaggg tatatgatgg gggaagttca aaactacatg gtggatggct tatgaaagca
     2161 gaggatataa aaggtttaac accgactcaa attaaagata aatttgcatt acctaatata
     2221 cccaaatttg ttggagaagt tactttgcca aaaggcagca atatcagaat gggagaagta
     2281 aatcctcttt tcgaaaataa aggtgggggt atacaatttg atttgaaagg tcaattcatt
     2341 ggtgaattta aagaactcgg aaaaatctca gaatggggcg gattaaagtg acaattaacg
     2401 cagaatacat tgataataaa ttaactgctt ttggaaaaag cattgaattt aagaataaaa
     2461 ttgtagaatt aaaagagaat gataactgtt tatttgtgag attattggtt gttcctggtc
     2521 aagaattaaa tgaaaacact ttaagtaatg tatatgcaat taataaattg ggtgaaattc
     2581 aatggcaaat aaaaaatgtt gcgccaaaag gaaataatgt ttatatatgc gcaccattgg
     2641 taggtatgga tatcgaagag aacgatttat ttgtaacaga tttcatgggg cggaggtttg
     2701 aagttaatca agaaaatggt gaactcaacc aagtgagaat agtgaaataa actctccttt
     2761 tactctaata aatttttgtt tgttgaagtt tattaggata ttggatttac tattaaaggt
     2821 agcgaggtgg actaaaagtc tcgtaattac tggatttaaa tgataatacg ggtgaaatca
     2881 aggatattga agagttaata aatgaaaact catgtgatta agtaaacaaa ttacggagga
     2941 ataactattt ttaagttgga aataagtttg cgctttagaa agccgacatt attaagaaat
     3001 gctgaaacag ggcacgcacc atttaaagcg ataacttaat ttgaataatt tttaaatgaa
     3061 gatgagtgaa aattggctaa aggtactttc tcatgagaga aatatatcaa gtgaactgtc
     3121 cacaagagaa tataagacct ttttagagga tatgatgttg aggtagttaa gctgatagat
     3181 ttgctaaaga aagaatcaaa cacaaagatg aggaaaaagc ttatgacgaa gataactcat
     3241 atgaataat
//
LOCUS       DASDYK010000188         3209 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.190, whole genome shotgun sequence.
ACCESSION   DASDYK010000188 DASDYK010000000
VERSION     DASDYK010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3209)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3209)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3209
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.190"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            294..503
                     /locus_tag="U0308_002863"
     CDS             294..503
                     /locus_tag="U0308_002863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-dependent RNA polymerase auxiliary subunit
                     epsilon family protein"
                     /protein_id="HEM2317814.1"
                     /translation="MIFKVFYQETLTETPVREKTQSLYVEAESEVKVRQLLKDEPFHI
                     EFVEKISDAHLAYEKENPDFALWEK"
     gene            510..2177
                     /locus_tag="U0308_002864"
     CDS             510..2177
                     /locus_tag="U0308_002864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEM2317815.1"
                     /translation="MKFVKNNETAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPE
                     DELLGIDYVIPDYSYLVKNKDKIKGLFITHGHEDHIGGVPYLLRDLNIPIYAGKLASA
                     LIRNKLEEHGLLRQTKIYEYEEDDVFKFRKTSISFFRTTHSIPDTYGIVVKTPSGNIV
                     HTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNI
                     FRDVEGRIIFATFASNIYRLQQVVESSIETGRKIAVFGRSMESAMEIGKQLGYIQAPK
                     DTFIDVHQLNKTPAGNVTILCTGSQGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPI
                     PGNTTSVNRTINLLYQAGAEVIHGKVNNIHTSGHGGQQEQKLMLRLMKPKFFMPIHGE
                     FRMQKIHAESAEECGVPEENSFIMANGDVLALTSETAHVAGKIHAASVYIDGSGIGDI
                     GNIVLRDRRILSEEGLVIVVVSIDMKNSRVMAGPDIISRGFIYMRESGNLIGEAQGLL
                     TRHLNKVMEQKTTQWSEIKNEITDTLQPFLYEKTKRRPMILPIIMEV"
     gene            2286..>3209
                     /locus_tag="U0308_002865"
     CDS             2286..>3209
                     /locus_tag="U0308_002865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HEM2317816.1"
                     /translation="MTETRAEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYI
                     TVQNTFSKINVPLESSNKTLSDLEKKKPFSVLLMGSDARPGEKNGRADTIILATANKQ
                     QNAVEMVSIPRDTKVDYGNGDIGKINASYSNGGPSGTVSAVEKLMPGVPVDYFISINM
                     EGFKDLVDAVGGITVYNDIDLTEVNSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQ
                     DRQRDVIIGIANKVISSSGVSNFESIMKAVGDNFQTNMTLTDITSMAANYSSVLKNVD
                     SQELKGEGEMIYSESYGFDLYYFAPDKTDLER"
BASE COUNT         1080 a          581 c          595 g          953 t
ORIGIN      
        1 aaacttataa ttacatcttt tactcggaaa tttgtttcaa attcccaaaa taaaggtatg
       61 caattataac ggataagaaa tttaacatac gtgcacagct atttttatac attagtctgt
      121 ggtaattttt ctttgtcttt tttatgcctg attgtcagta tctcgtgcac ccatatccgc
      181 ttgctactaa gtccacaact gaaagcaagc caattattac tgaataatta ttaggttttc
      241 gaccagagaa tctattttta aaaactaaac ttaaaattta aggagagaaa aacatgattt
      301 ttaaagtatt ttatcaagaa acactgacag aaacacccgt acgcgaaaaa acacaatctt
      361 tatacgtaga agcggaaagc gaagtaaaag tacgccaact tttaaaagat gaacctttcc
      421 acatcgaatt tgtcgaaaaa attagtgacg cgcacttagc ttatgaaaag gaaaacccag
      481 acttcgcgct ctgggaaaaa taagcctata tgaaatttgt taaaaataat gagacagctg
      541 ttttcgccct tggtggacta ggcgaaatcg gtaaaaacac atatggcgta caatttcaag
      601 acgaaattat tctaattgat gcaggaatca agttcccgga agacgaactt cttggtattg
      661 attatgttat tcctgactac agttacctag ttaaaaacaa agataagatt aaagggcttt
      721 ttatcaccca tggtcatgaa gatcatatcg gtggcgttcc ttacctactt cgcgatctta
      781 atatcccaat ttacgctggg aaacttgcga gtgcacttat ccgcaacaaa ttagaagaac
      841 atggcttgct tcgtcaaacc aaaatttatg aatatgaaga agatgacgtt tttaaattca
      901 gaaaaacaag tatctctttc ttccgtacaa cccatagtat tcctgatacg tatggtattg
      961 ttgtcaaaac tccatctggt aacatcgttc atactggtga cttcaagttt gattttactc
     1021 cagttggcga accagcaaac ctaacaaaaa tggctgaaat cggtaaagaa ggcgttcttt
     1081 gtttactatc tgatagtaca aatgcggaag taccaaattt caccatgagt gagcgtgtcg
     1141 ttggcgaaag tattaaaaat attttccgcg atgtagaagg acgaattatt ttcgctacct
     1201 tcgcatctaa tatttaccgt ttacaacaag tagttgaatc ctctatcgaa actggccgta
     1261 aaatcgctgt tttcggtcgt agtatggaat ctgctatgga aatcggtaaa caattaggct
     1321 atattcaagc gccaaaagat acatttattg atgtgcatca acttaataaa acacccgctg
     1381 gaaatgtgac tatcctttgt acagggagtc aaggtgaacc aatggctgct ctttctagaa
     1441 ttgctaatgg tacgcaccgc caaatccaaa ttcaaccagg tgacacggta gtcttctcgt
     1501 cttccccaat ccctggtaat acaacgagtg taaaccgcac aatcaattta ctatatcaag
     1561 ctggtgcaga agttatccat ggtaaagtaa ataatatcca tacttctggt cacggtggtc
     1621 aacaagaaca aaaactaatg cttcgtttga tgaaacctaa attctttatg ccaattcatg
     1681 gtgaattcag aatgcaaaaa atccatgcag agtctgctga agaatgtggt gttccagaag
     1741 aaaatagctt tattatggca aatggagatg tactcgcatt aacaagtgaa acagctcatg
     1801 ttgctggtaa aatccatgca gcaagcgtat atattgatgg tagcggtatt ggcgatatcg
     1861 gtaatattgt ccttcgcgat cgtcgtattc tttctgaaga aggcctcgta attgttgttg
     1921 tatccattga tatgaaaaat tctcgtgtga tggcaggacc tgatattatt tcacgcggct
     1981 tcatttatat gcgtgaatcc ggtaatctca tcggagaagc acaaggcctc ctaacgcgac
     2041 acttaaataa agtaatggaa caaaaaacaa cgcaatggtc tgaaatcaaa aatgaaatta
     2101 cagatacttt gcaacctttc ttgtacgaaa aaacaaaacg tcgtccaatg attttaccaa
     2161 taatcatgga agtatagttt tcaagacgat aaatggtttc aaaatcattt atcgtttttt
     2221 tgttgatttc tcagaaagac gatggtatgt ttaaacaaac aaaatagaaa gacgaggaaa
     2281 attttatgac agaaactagg gctgaaaaaa agaaaaaaac aacgtccact tttactaaag
     2341 ttatgaaaat tgctagtgtt gctcttttag gaattatctt cttctctata acaggattgg
     2401 cagcgaagta ttacatcacc gttcaaaata ccttttcaaa aataaatgtc cctctagaat
     2461 caagtaataa aactttaagt gatttagaaa agaaaaaacc tttctcagtg ttactcatgg
     2521 gttcagatgc ccgacctggt gaaaaaaatg gtcgcgcaga tacaattatt cttgccacag
     2581 ctaataaaca acaaaatgcc gtagaaatgg ttagtattcc tcgtgataca aaagtagact
     2641 acggaaatgg tgacattggt aagattaatg cctcttactc caacggtggc ccctcaggaa
     2701 cagtttcagc ggtcgaaaaa cttatgccag gagttcccgt agattatttc atttcaatca
     2761 atatggaggg ctttaaagac ctagttgatg cagttggtgg tattactgtt tataacgata
     2821 tcgacttaac agaagtaaat agcaaatttg ttaaaggtaa cattacttta aacggaacag
     2881 aagctttaca atatgttcgt attcgtcatg aagatcctcg tggtgacttt ggtcgtcaag
     2941 atagacagcg cgatgtcatt attggtattg cgaataaggt tatcagttct tccggagttt
     3001 ccaattttga aagcattatg aaagccgttg gcgataattt ccaaactaat atgactctta
     3061 cagatattac atctatggct gcaaattatt cttccgtact taaaaacgtc gattcccaag
     3121 aacttaaagg cgaaggggaa atgatttata gcgagtctta tggatttgat ttatattact
     3181 tcgcccctga taaaacagat ttagagcga
//
LOCUS       DASDYK010000189         3193 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.191, whole genome shotgun sequence.
ACCESSION   DASDYK010000189 DASDYK010000000
VERSION     DASDYK010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3193
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.191"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            279..530
                     /locus_tag="U0308_002866"
     CDS             279..530
                     /locus_tag="U0308_002866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317817.1"
                     /translation="MKTIANEYQEYITERIRLGDNGIKLTAYSFENGYQARVIENLDS
                     NFVSLVLVKSHDGKNSIKDILLELTNEQLIEKLEEIKNL"
     gene            549..839
                     /locus_tag="U0308_002867"
     CDS             549..839
                     /locus_tag="U0308_002867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317818.1"
                     /translation="MFFLGKYYWHVSRLGGKPTEIRHYKHITKMYKFILRNPAMFKDK
                     TLTIYDHAKPVTNMTFNEIKYRASLNLCETVERKYVLGLKQRLTEEQKEARK"
     gene            836..1648
                     /locus_tag="U0308_002868"
     CDS             836..1648
                     /locus_tag="U0308_002868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEM2317819.1"
                     /translation="MKRILNYPGSKWSLADLIIDNMPEHKSYLEPFCGSCAVFMNKQK
                     ATLETINDLDSRLVNLFKAMRDNPEKLQYLIMHTLYSREEYMLSHEISSDSLEDARRM
                     AVRLWFAVGGKTNANVGFRKNVSWNGPYNAYEWNDMYNRIGIAAARLKDAQIENVDAI
                     KLIEQHNDKDTLIYCDPPYIPTSLVSPHYQHDFSLEQHKELLKVLKNHEGKVMLSGYE
                     SELYKQELSDWPALKTMTKVGITSEKKSDRQEIIWCNFEPPMQLNLFKEEQA"
     gene            1645..2250
                     /locus_tag="U0308_002869"
     CDS             1645..2250
                     /locus_tag="U0308_002869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1642 domain-containing protein"
                     /protein_id="HEM2317820.1"
                     /translation="MKFRKGDKVEFIWSGKLKQGVVTEIEETKNAISYQIKYSGDMGM
                     TWLDERDLIAPAQVLKVPQFVADWIEQRDAKGDDLYTAMDKSWQSMNYKVIDWLEEGE
                     DRYNKFARAWLDGYEVEKEPLYYVRLPLSTWNDDAAELEVINMYVLLNIQSDETTFTG
                     SIINKNKKWKTKLTEAEIKGMPGGDIYWQFAVPVEEVEGEA"
     gene            2247..2423
                     /locus_tag="U0308_002870"
     CDS             2247..2423
                     /locus_tag="U0308_002870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317821.1"
                     /translation="MTVAELIEALNRHDKHLPVFIGTSLLCEVEKDSLCNEVIDVPVL
                     FLKTAIEVQWHESD"
     gene            2410..2778
                     /locus_tag="U0308_002871"
     CDS             2410..2778
                     /locus_tag="U0308_002871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317822.1"
                     /translation="MRAIKFKGKRKDNGKWAHGYFVIDDCDCAYIINVENDGYSAIPI
                     IKTCYEVDAETVVCAGEQESKQLVRLLETARKLEIKKNEDNVHPGRISKEKEAWIEGL
                     EFATNIAIDFFKVRKEWAEK"
     gene            2775..3185
                     /locus_tag="U0308_002872"
     CDS             2775..3185
                     /locus_tag="U0308_002872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317823.1"
                     /translation="MREIEFRGKAIHPNSLEQIVGSWAYGGIFENKIISRNLDMDSHY
                     HGFISEIEIDLKTIGQYTGLKDKNGKKIFEGDIVDISVYDRLDWSSIKGKVVFLNGAW
                     LVEDVGHFAITLQSETNEIEIIGNVHENLGLWEA"
BASE COUNT         1183 a          441 c          729 g          840 t
ORIGIN      
        1 tattaatgct gcttgcaagg agtgatagag aatgaatgta gaaaatccga tgatagttga
       61 tgattactgg gatgatggat ttcgacactg aggagcgttg atagatgaat gtagaaaata
      121 caatcgattt atgcagatta aaagaaatgt tgttatatca aaaagaaaaa acgcaaagaa
      181 attgattttc agattgagat tttagagcga ttgataaatg agacatcaaa gaaagataac
      241 aaagaaactc aaatatggct gagcaaggag ttaaacacat gaaaacaatc gcaaatgagt
      301 atcaagaata catcacagaa agaataagac taggtgacaa cggtataaag ctaactgctt
      361 atagttttga aaatggctat caagcgagag tgatagaaaa ccttgactct aattttgtat
      421 cactcgtact tgtaaagtct catgacggaa aaaactctat aaaagatatt ttgcttgaat
      481 taacgaacga acaactgatt gaaaagctag aagagataaa gaatttataa attaagaagt
      541 tagaaaggat gtttttcttg gggaaatatt attggcatgt gtcaaggctt ggtgggaaac
      601 cgacagaaat tcgacactat aagcacatta caaaaatgta taaatttatt ttgcgaaatc
      661 ctgctatgtt caaagacaaa actttaacga tttatgatca cgcaaaacca gttacaaaca
      721 tgacgtttaa cgaaattaag tatagagcta gtttgaattt atgtgaaacg gtagaacgaa
      781 agtatgtgtt aggacttaag caaaggctta cggaggaaca gaaggaggct agaaagtgaa
      841 acgaatactt aattatccgg gcagtaaatg gagtttggca gatttaatca ttgataatat
      901 gccggagcat aaaagttatt tagaaccatt ctgcggatca tgcgcagtct ttatgaacaa
      961 gcaaaaagct actttagaga cgataaacga tttagacagt cgactagtta atctttttaa
     1021 agcaatgcgt gataatccag aaaaactgca gtatttaatt atgcacacgc tgtattctcg
     1081 tgaagagtat atgctttcgc atgaaatatc aagtgattca ttagaagacg ctagacgcat
     1141 ggctgtgagg ctctggtttg ctgttggtgg taagaccaat gcaaatgttg gatttagaaa
     1201 aaacgtgtct tggaatggtc cttacaacgc atatgaatgg aatgacatgt ataaccgaat
     1261 tggaatagct gcagcaagac tgaaagacgc tcaaatcgaa aatgtagatg caattaaact
     1321 gattgaacag cataacgata aagatacact gatatattgt gacccgccat atattccgac
     1381 atcgctagta agtccacatt atcagcacga ttttagttta gaacaacata aagagttact
     1441 caaagtgctt aaaaatcatg agggcaaagt aatgttaagc ggctatgaat cagaactata
     1501 taaacaagag ttatcagact ggccagctct taaaacaatg acaaaagtag gcattacatc
     1561 agaaaagaaa tcagataggc aagaaattat ttggtgcaat tttgagccac ctatgcaatt
     1621 aaatcttttt aaggaggaac aagcatgaaa tttagaaaag gcgataaagt agagtttatt
     1681 tggtcaggta aattgaaaca aggtgttgta actgaaatag aagaaactaa aaatgctata
     1741 tcctaccaaa ttaaatatag tggagacatg ggcatgactt ggctggatga aagggatttg
     1801 attgcgccag ctcaagtttt aaaagtcccg caatttgttg ctgattggat tgagcagaga
     1861 gatgcaaagg gtgacgattt atacaccgca atggacaaaa gctggcagag catgaactat
     1921 aaagtaatcg actggctaga agagggagaa gacagataca acaaattcgc acgcgcttgg
     1981 ctagacggct acgaagtcga gaaggaaccg ctttattatg taagattgcc gctttcaaca
     2041 tggaacgatg acgcagccga attagaagtg attaatatgt atgttttgtt aaatatacaa
     2101 tctgatgaaa caacttttac tggatcaatt atcaataaaa ataagaaatg gaaaaccaaa
     2161 ttaacagaag cggaaattaa aggcatgccc ggaggagaca tatattggca gtttgctgtt
     2221 cctgttgagg aagtggaggg tgaagcatga cagtagcaga attaatcgaa gcactgaata
     2281 gacacgacaa acacttgcct gttttcatag gaacttcact tttatgtgag gttgaaaagg
     2341 attcgttatg taatgaggtc attgacgtgc ccgtgttgtt tttaaaaact gcaatagagg
     2401 tgcaatggca tgagagcgat taaattcaaa ggaaagcgca aagacaacgg caaatgggcg
     2461 cacggatact ttgtcataga tgactgtgat tgtgcatata ttataaacgt tgagaacgac
     2521 ggatatagcg ctattccgat aatcaagacg tgttatgagg ttgatgctga aactgtcgtg
     2581 tgcgcaggag aacaagaaag caaacaacta gtaagacttt tagaaacagc tagaaagtta
     2641 gagattaaga aaaacgaaga taatgtacat cctggtcgga tatcgaaaga aaaagaggcg
     2701 tggattgaag gcctagaatt tgcgacaaat attgcaattg actttttcaa ggtgcgaaag
     2761 gagtgggcag agaaatgaga gagattgagt ttagagggaa agcgattcat ccaaacagtc
     2821 ttgaacaaat tgtaggcagt tgggcatatg gagggatatt tgaaaataaa attatttcta
     2881 gaaatttaga tatggatagc cattatcatg ggtttatttc ggaaattgaa attgacttaa
     2941 aaaccatcgg tcaatacaca ggtttaaagg acaaaaacgg caagaagatt tttgaagggg
     3001 atatagtcga tattagtgtt tatgatcgtc ttgattggag ctcaataaaa ggcaaggttg
     3061 tatttttgaa tggcgcgtgg ctagttgagg atgtagggca ttttgcgata actctgcaat
     3121 ctgaaacaaa tgaaatcgaa attatcggta atgtgcacga aaatttagga ttgtgggagg
     3181 catagtaaat gac
//
LOCUS       DASDYK010000190         3170 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.192, whole genome shotgun sequence.
ACCESSION   DASDYK010000190 DASDYK010000000
VERSION     DASDYK010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3170
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.192"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..2542
                     /gene="addA"
                     /locus_tag="U0308_002873"
     CDS             <1..2542
                     /gene="addA"
                     /locus_tag="U0308_002873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddA"
                     /protein_id="HEM2317824.1"
                     /translation="EASEVAKNYQKQFKEVLIDEYQDTNMVQETILRLVTNSGEEQGN
                     LFMVGDVKQSIYRFRLAEPTLFMTKYQTYQQDGNGSGIRIDLSQNFRSRKEVLDATNF
                     IFHQLMDKHIAEIDYDAAAELTLGASFPETTDMATELLLIDMKSVESETEDELSPQEL
                     QKNQVESRAIAMKIKEMIDNKFPIFDKKMKQNRPIQYRDIVILARAMTSAPDMEEAMK
                     VQDIPFYANNNSGYFETTEVATMIALMKVIDNPYQDIPLAAVLRSPIIGLNEEELGQV
                     RMAKKNGYFYDALLTYKDTTVSETADKMSDFIQQLNNWRELSIRENLTSLIWQIYQET
                     NFYEFVGGLPGGKQRQANLRALYDRANQYEKTSFRGLFRFVRFVERLEVRGDDLGTAK
                     TLGEKEDVVRMMTIHASKGLEFPVVIVSGLSRKFNMRDIYSKTLLDKDYGFASNYRDI
                     EKMIVYPTIMQQAMKQKKSREMIAEEMRVLYVALTRAEEKLILTATVPDFEKTSKNWL
                     QVAKEKETILPASTRAKAKCYLDWIGNATIRHPNFKELLCEEMIQTLPTDMKLQIEIK
                     TKEMFLTNELEKTETVNWLDNIKEHQPIPVKSPYKDEIQRYMNYEYQNEEATEIRAKQ
                     SVTELKRQFSLQDSWSDTTLLKEFQKVSLDRPKFLQQNKLSATEIGTAMHTLMQAVSL
                     EHQPTKEDLEQLLQTMREKDILTEAQLKAINIKQVLGFFESQLGKTMLQKKDLVKREV
                     PFSYLLPVSELYEKVDIDERVLIQGVVDSMIEEEETITLIDYKTDKIEGRYSNWEAAE
                     KIMKERYHIQIKLYAKAIQAISGKKVDAAYLYFFDGQHICQINTKEGF"
     gene            2543..>3170
                     /locus_tag="U0308_002874"
     CDS             2543..>3170
                     /locus_tag="U0308_002874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEM2317825.1"
                     /translation="MKWLSYQHEGDFNYGILTPENKIIPAQTIFSNPPATLLDFIKEK
                     PLVPELKGIKGDIDLAEVEIQVPITPPNNIIAIGKNYYNHVLEMGSKEDVPEHILVFT
                     KSANSLLPHNGKIELHQNLTSQLDYEGELAIIIGEKVRDLSEQDALSAIFGFTILNDV
                     TARDLQKKHKQFYLGKSLDASCPMGPYVLENNGSKEVVFHIETKVNGEI"
BASE COUNT         1189 a          477 c          622 g          882 t
ORIGIN      
        1 tgaagcatca gaagttgcta aaaactatca aaaacaattt aaagaagtat taattgatga
       61 atatcaagat actaatatgg tgcaagaaac tatcctacga ctagtaacta attcaggtga
      121 ggaacaaggg aatttattca tggttgggga tgtaaagcag tctatttatc ggttccgttt
      181 agcagaacca acgctattta tgacgaaata tcaaacttac caacaagatg gaaatggaag
      241 cggaatacgt attgatttgt cgcaaaactt tagaagtaga aaagaagttt tagatgcgac
      301 taattttata tttcatcaat tgatggacaa gcacattgct gaaattgact atgatgcagc
      361 ggcggaatta actttaggcg caagttttcc tgaaacgact gatatggcga cggaactact
      421 gctaattgat atgaagtctg tggagagtga aactgaagat gaattgtcac ctcaagaatt
      481 acaaaaaaat caagtggaat cacgtgcaat tgcaatgaaa attaaagaaa tgatagacaa
      541 taagtttcct atatttgata aaaaaatgaa acaaaacaga ccgattcaat atcgagatat
      601 agttatttta gctagggcga tgacaagcgc tccagatatg gaagaagcaa tgaaagttca
      661 ggatatccct ttttacgcga ataacaattc tggttatttt gaaacaacag aagtagctac
      721 gatgattgca ctgatgaaag tgattgacaa cccttaccaa gatattccgc tcgctgctgt
      781 tttacggtca cccataatcg gtttaaacga agaagagcta ggacaagttc gtatggcgaa
      841 aaagaatggt tatttctatg atgcattgtt aacatacaaa gatacaaccg tttcggaaac
      901 tgcagataaa atgagtgatt ttattcaaca gttaaataat tggcgtgagt tatctatccg
      961 ggaaaactta acatcattaa tttggcaaat ctatcaagaa actaattttt atgaatttgt
     1021 tggtggatta ccgggtggca aacaacgcca ggctaattta cgtgcgttat atgaccgagc
     1081 taatcaatac gaaaaaacat cttttcgtgg gttgtttcgc tttgtccgtt ttgtcgaacg
     1141 cttagaagtt cgaggcgatg atttaggaac cgcaaaaaca cttggtgaaa aagaagatgt
     1201 cgttcgtatg atgacaatcc atgcaagtaa aggattagaa tttccagtgg tcattgtctc
     1261 tgggttaagc aggaaattta atatgcgtga tatttatagc aaaacacttt tagataagga
     1321 ttacggtttt gcatctaatt atcgagatat agagaaaatg attgtttatc caacaattat
     1381 gcagcaagca atgaaacaaa aaaaatctcg agaaatgatc gcggaagaga tgcgagttct
     1441 ttacgttgct cttactcgtg cagaagagaa gttaattttg acagcaacgg tgcctgattt
     1501 tgaaaaaaca agtaagaatt ggttacaagt tgcaaaagaa aaagagacta ttttacctgc
     1561 atccacaaga gctaaagcga aatgttattt ggattggata ggaaacgcca caattagaca
     1621 tcctaatttt aaagaattat tgtgtgagga aatgatccaa acgcttccga cagatatgaa
     1681 actacagatt gaaataaaaa ccaaggaaat gtttctaact aatgaattgg aaaagacaga
     1741 aacggttaat tggttggaca atataaaaga acatcaacca atacctgtca aaagccctta
     1801 taaggatgaa attcagcgat atatgaacta tgagtaccaa aatgaagagg caacagaaat
     1861 tcgtgctaaa cagtcggtaa cagagctcaa gcggcaattt tctttgcaag atagttggag
     1921 tgatactaca cttttaaaag aatttcaaaa agtttcatta gacagaccca aatttttaca
     1981 gcaaaataaa ttatctgcaa cagaaattgg cacggcaatg catacgctaa tgcaagcagt
     2041 ttctttagaa catcaaccga caaaggaaga tttggaacag cttttacaaa caatgcgtga
     2101 aaaggatata ctaacagaag cacaacttaa agcaatcaat attaaacaag tgctaggctt
     2161 ttttgaatcg caattaggaa aaactatgtt gcagaaaaaa gatttagtaa aacgtgaagt
     2221 gccatttagt tatttacttc ctgtatctga gttatacgaa aaagttgata tagacgaacg
     2281 tgtacttatc caaggtgttg tagatagcat gattgaagaa gaagaaacaa ttactttgat
     2341 tgactataaa acagataaaa tagagggtag gtattctaat tgggaagctg ctgaaaaaat
     2401 aatgaaagaa cgatatcata ttcaaatcaa actttatgca aaagcgattc aagcgataag
     2461 tggtaaaaaa gttgatgcag cttatttata tttcttcgat ggacaacata tatgtcaaat
     2521 aaacacaaag gaaggttttt aaatgaaatg gttgagttat cagcatgagg gcgattttaa
     2581 ttatggcatt ttaacacctg aaaataaaat tatccctgca caaacaattt tttcgaatcc
     2641 acctgctact cttttagact ttatcaaaga aaagccgctt gtccctgaac taaaaggaat
     2701 caaaggggat attgatttag ctgaagtaga aatccaagtt cctatcaccc caccaaataa
     2761 tattattgca attgggaaaa attattataa tcatgtgcta gagatgggga gcaaagaaga
     2821 cgttccagaa catatccttg tatttacaaa aagtgctaat agtttattgc cgcataatgg
     2881 caaaattgag ctacatcaaa acctaactag tcaattagat tatgaaggcg aactcgcaat
     2941 aattatagga gaaaaggtaa gagatttatc cgagcaagat gcattatccg ccatatttgg
     3001 atttactatt ttaaatgatg taacagctcg ggatcttcag aaaaaacata aacaatttta
     3061 ccttgggaaa agtcttgatg ccagttgtcc aatgggacct tatgtgctgg aaaacaatgg
     3121 aagtaaagaa gttgtttttc atattgaaac taaggttaac ggtgaaataa
//
LOCUS       DASDYK010000191         3169 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.193, whole genome shotgun sequence.
ACCESSION   DASDYK010000191 DASDYK010000000
VERSION     DASDYK010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3169
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.193"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            119..1390
                     /locus_tag="U0308_002875"
     CDS             119..1390
                     /locus_tag="U0308_002875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2317826.1"
                     /translation="MNLIGLRIKNIRKEKQLTLKDVAQGIISVPYLANIENGIKVASL
                     ETLIHIARRLEIPEEVLLMSEDEENRALLKELDEIFKLLVCSNPKEIESRLKKIAENV
                     ELQHESPAVELSFYCLQVAFYYKTWKFSRAEEVEAKYLKNAEKRVENAFPPQLLSYYY
                     YGQAVKHSHATCNYQLAVEYWEKCVALTDNKNFLTVFHVCICINYICQSIYEPALGHI
                     QQAWDLIKDEEQERFVSILYFYGYIYFQIGFIGEAKYRFKQAQKYFSKYPEAKKIYYF
                     VVQLKMAEIENIEGNETLFYEKITCLYKEIMAYKTTNISFNNNDYLVITELMVIFAEK
                     GFVEEATSLMGLMNTVVERVQELNYFMEYTEILLLYQQDEQVSYEKKMIQLLKKINAS
                     NDPALIERVKKHASKHFAKSTKYKMAYDILS"
     gene            1487..>3169
                     /locus_tag="U0308_002876"
     CDS             1487..>3169
                     /locus_tag="U0308_002876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2317827.1"
                     /translation="MQKKLIGSLFILIVLLIIGSTSEKVQASPTSSNGWQLKWAIKNN
                     DFEDVDIEDYGVDAGTTNVWQVNQKGVEAWGTTNPTGNIEVWQNGNGYNVPAFSGNNF
                     IELNSDGIGPVYQDIRTIPGSNLTWKFSHRGRMGVDTADLLIGSPESQTEVSRVSDGE
                     TWGSFEGNYIVPEGQTITRLTFNPISTASGSLTSGNFLDDIQLYINVNGAKIGDVVWY
                     DFNGDGIQQDSEEPAPFVKVDLLTKDGVFKESATTNNIGSYLFTDVLPGDYQVKFTLP
                     NNDFIFSKANQGNDTTLNSKPDKTGIASVNVPNLKSENFDMDAGITTNGKVEIQKFSG
                     DKALSGAVYAIKDNSQSEVAKITTGQNGTGTAEGLPPGKYTATEVTAPLGYQKNPTPK
                     TFTITYGDTNPVKLTFQNVEKTGSITIFKQDEANKKGLANAVFDVKSTDGTTLKKVTT
                     NSKGYALAENLQPGTYVITEATAPPGYEKSTKEIRVTIPFNPQKTINISFSDNKIMVP
                     KKPTPTKGSTVVKVSGETTKITALPQTGDSSNSSTIFIGLLIVVVSGLFVYRR"
BASE COUNT         1146 a          473 c          652 g          898 t
ORIGIN      
        1 caagcttttt tagaaaatat aaaaatgaaa gcaaaaaagt agctggaaaa agtagttgtt
       61 ttccatttcg aaatgtttat aattaagagg aaaatattga aaaaacggcg gtgacatcat
      121 gaacttaatc ggtttgcgaa ttaaaaatat tcgtaaagag aaacagctga cattaaaaga
      181 cgtagcgcaa ggaattatct ctgtgcctta tttagcaaat atagaaaatg gtattaaagt
      241 tgcttctttg gaaacgttga tacacatagc aagaaggtta gaaataccgg aagaagtgtt
      301 attgatgagc gaagatgaag agaatagagc acttttgaaa gaattggatg agatttttaa
      361 actattggtt tgttctaatc ctaaagaaat agaaagtaga ttaaagaaaa tagcggaaaa
      421 tgtagagctg cagcacgaat caccagctgt cgaacttagc ttttattgtt tacaggtggc
      481 attttattat aagacttgga aattttcaag agcggaagaa gtggaagcta aatatttaaa
      541 gaacgcagaa aaacgagtgg aaaatgcttt cccgccccaa ttgctttcct actattatta
      601 cggtcaggca gtaaaacatt ctcatgcaac gtgtaattat caattagcag tggagtactg
      661 ggaaaagtgt gttgctctca ctgataataa aaattttctc actgtttttc atgtgtgcat
      721 ctgcattaat tatatttgcc aaagtattta tgaacctgca cttggacata tccagcaagc
      781 gtgggattta ataaaggatg aagagcagga acgttttgtc tctattcttt atttctacgg
      841 ttacatttat tttcaaattg gctttattgg tgaggcaaaa tacagattta aacaagcaca
      901 aaagtacttt tccaaatatc cagaagctaa aaaaatctat tatttcgtcg ttcagttaaa
      961 aatggcagaa attgaaaata ttgagggaaa tgagacgcta ttttatgaaa aaataacctg
     1021 tttgtataaa gaaataatgg cctacaaaac gactaatata agctttaaca acaacgatta
     1081 cctagttata acagaactga tggttatttt tgcggaaaaa ggttttgttg aagaagcaac
     1141 ttcattaatg gggctgatga atacagtagt tgagcgagta caagaactga attactttat
     1201 ggaatacacc gaaatattgc ttttatatca acaggatgag caagtaagtt atgaaaagaa
     1261 aatgatacaa ttactgaaaa aaattaacgc atcaaatgat ccagcattaa ttgaacgagt
     1321 gaaaaagcat gcaagtaaac atttcgccaa atcaacgaaa tataaaatgg catacgatat
     1381 tttgtcttaa tattagaaac agctagttgt tatactggct gttttctttt gcttttttgc
     1441 gggtaattaa aggtgttagg tttagggcga aaaaggggga gaaagcatgc aaaaaaaatt
     1501 aataggtagt ttgtttattc taattgtctt acttattatt gggagcactt ctgaaaaagt
     1561 gcaagcttct ccaacatctt caaatggttg gcaattaaaa tgggccatta aaaataatga
     1621 ttttgaagat gttgatatcg aggattatgg tgtagatgct ggtacgacaa atgtttggca
     1681 agtaaatcaa aaaggtgtag aggcctgggg aacaactaat ccaactggga atattgaagt
     1741 atggcaaaat ggtaatggat acaatgtgcc tgctttttct ggaaacaatt ttattgaatt
     1801 aaactcggat ggtattggtc cagtttatca agacattcgg acaatcccag gttccaattt
     1861 aacttggaag ttctcacacc gggggcgcat gggggtagac acggctgatt tacttattgg
     1921 ctcaccagaa agtcaaaccg aagtgtcgcg agtttctgat ggagaaacat gggggagttt
     1981 tgaagggaat tatatagtgc ctgaaggaca gactatcaca aggctaactt tcaatcctat
     2041 ttcaacagca agtggctcac ttaccagcgg aaattttttg gatgatattc agttgtatat
     2101 taatgtaaat ggcgcaaaaa ttggcgatgt tgtttggtac gattttaatg gggatggtat
     2161 tcaacaagat agcgaagaac ctgctccttt cgtaaaggta gatttattaa cgaaagatgg
     2221 tgtgtttaaa gaaagtgcga ccacgaataa tatcggctct tatttattca cagatgtttt
     2281 gccgggggac tatcaagtga aatttaccct accgaataat gattttattt tttcaaaagc
     2341 aaatcaaggc aatgatacga cgcttaattc caagccagat aaaacaggga tagcttcagt
     2401 aaatgtacct aatttaaaaa gtgagaattt tgatatggat gcgggaataa cgacgaatgg
     2461 taaagtcgaa attcaaaaat tttcaggaga taaggcgctg agtggagcgg tttatgccat
     2521 taaagataat tctcaatcag aagtggcgaa aataacgact ggtcaaaatg gtacagggac
     2581 agcggaaggg ctgccaccag ggaagtatac agcaaccgaa gttacagcac ctcttggtta
     2641 tcagaagaac ccaacaccaa aaacattcac tatcacgtac ggcgatacaa atcctgtcaa
     2701 actcactttt caaaacgttg agaaaacagg atcaattact atttttaaac aagatgaagc
     2761 gaataaaaaa ggtctagcaa atgccgtttt cgacgtaaag tcaacagatg gaacgacatt
     2821 aaaaaaagta actacaaata gtaaaggtta tgctcttgct gaaaacttac aacccggaac
     2881 ttatgtcata acggaagcaa cagcaccacc tggctatgaa aaatcaacca aagaaattcg
     2941 cgtaacgata ccatttaacc ctcaaaaaac tattaatatt tcttttagtg ataataaaat
     3001 aatggtacct aaaaaaccga ctccaacaaa gggaagtaca gtggtgaagg taagtggaga
     3061 aacgacaaaa attactgctc taccacaaac gggcgatagt tcaaatagct caacaatttt
     3121 tataggattg cttattgtcg tagttagcgg gttatttgtt tatagaaga
//
LOCUS       DASDYK010000192         3156 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.194, whole genome shotgun sequence.
ACCESSION   DASDYK010000192 DASDYK010000000
VERSION     DASDYK010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3156
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.194"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            47..2371
                     /locus_tag="U0308_002877"
     CDS             47..2371
                     /locus_tag="U0308_002877"
                     /inference="COORDINATES: protein motif:HMM:NF014581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HEM2317828.1"
                     /translation="MWFFNKRKEKDYRSLEQQKTNRYLQFKWLILYNICAYLIFTIII
                     NSILKYFYANFIAISEQKLSIFEFDQVEFVSFHWEWLFQPFLFFHSIPFLMYLILSFI
                     FGIKALKITRQAFYKYRVKPEELVKKGDSRWTTILELFEIYRAIPEKVLVFPGYGGTP
                     ISHYRDKLFIDPTPTNNCIIGTTRSGKGETEVFATIDNISRAEKQDSMVLNDPKGELF
                     TASYKTLRKRNFDVLAFNLTEPDEGVAYNLLETIKQYYTRGDIERAQALTNSLTYSLY
                     RAATAGKGGTDDFFNSCAASLVNALILGLLDICARTNEMEKVTMDNVAYMLNTMGSDV
                     KRSFERVEDQKVLVETNALDEFFQQFPNNHVAKKQYATSNFSTDKTRASIYTTAMEKL
                     NIFSMDNIARMTSSNDIDLDLIGFPQRIEIVGNPNSRCKILLKRGAKKIYQDQISLNR
                     RGVGLLRFNCDIQEGDRLEIFINQSGKAFGENAWKKETYSIHYSPVMNDDKPVIDEYT
                     GKVEYHVAMKLKLLESACEGEKIQVKMLNKTKPTAIFMILPDYDASNHVIASIFIRQL
                     YFILADNATRTRGIKCHRRVRFILDEFGNMPAIEGMENIITVCLGRNISFDLYVQDYA
                     QIISKYGEKVGETIKSNCGNHIYILTTNGDTAKEFSRNLGTKTVYGKEKSYGQGDLKS
                     NVSERSDDKQLLDATQLLQLKEGESVILRPLKRQDRKRNRVRAYPIFNRGSTAMKFRY
                     EYLNEDFDTTQFFSDLNIRGEHADFDLESNRIAI"
     gene            2454..2675
                     /locus_tag="U0308_002878"
     CDS             2454..2675
                     /locus_tag="U0308_002878"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HEM2317829.1"
                     /translation="MTTITFRVSDKEKAFIQEMAKLNGISISELSRKQIIEGLEDQID
                     LQSYERAIKAHQVKDESISFDEMKKELEL"
     gene            2672..2947
                     /locus_tag="U0308_002879"
     CDS             2672..2947
                     /locus_tag="U0308_002879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003866042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEM2317830.1"
                     /translation="MSKHFHVRFEKEAQKVLKKMDRFQAKLILSWIEKHIEGTDDPRQ
                     HGKSLVGNRSGQWRYRVGDYRLIAEIQDNEVIVLILNIGHRRDIYDK"
BASE COUNT         1132 a          434 c          594 g          996 t
ORIGIN      
        1 ccaaaactcc tatacatcta gcagtcaaaa tttggggaga taaataatgt ggttctttaa
       61 taaacgaaaa gagaaggact atcgttcttt agagcaacag aaaactaatc gttatcttca
      121 gtttaaatgg cttattttgt ataatatttg tgcgtatctg atatttacga ttattattaa
      181 tagcatactc aaatatttct atgctaactt catagctatt tcagagcaga aactttcgat
      241 atttgaattt gatcaagttg aatttgtctc ctttcactgg gaatggttat ttcaaccatt
      301 cctttttttt cattcaattc catttttaat gtatctgata ttgtctttta tattcggtat
      361 aaaggcatta aagataactc gtcaagcttt ttacaaatat agagttaagc cagaagaatt
      421 ggtaaaaaaa ggtgatagca ggtggacgac tatactagaa ttattcgaaa tatatcgagc
      481 tattcctgaa aaggtactgg tatttccagg atatggcgga acccctataa gtcattaccg
      541 tgataaacta ttcattgacc caacaccaac taataattgt attatcggta ctacgcggtc
      601 aggtaagggc gaaacagaag tatttgcaac aattgataat atatcacgtg ccgaaaagca
      661 agatagtatg gtgcttaatg atccaaaggg tgaactcttt acagcgagtt ataaaacact
      721 tcgtaagagg aactttgacg ttttagcctt taatctgaca gagccagatg aaggcgtagc
      781 atataatttg ttagaaacaa taaaacaata ttatactcga ggagatattg aacgggctca
      841 agcattaact aatagtctta cttactcttt atatcgtgca gctactgctg gtaaaggagg
      901 cacggatgat ttctttaatt cttgtgctgc ttctttagtg aatgctctaa ttttaggatt
      961 acttgatata tgtgcaagaa ctaatgaaat ggaaaaagta acaatggata atgtagcata
     1021 tatgcttaac accatgggta gtgatgtaaa acgttcgttt gaaagagtag aagatcaaaa
     1081 ggtacttgta gaaacaaatg ctttagatga attcttccaa caatttccta ataatcatgt
     1141 agcgaaaaaa caatacgcaa cctccaattt tagtactgat aaaacgcgtg catctattta
     1201 tacaacagct atggaaaaac taaatatttt ttcaatggat aatattgcgc gtatgacctc
     1261 ttcaaatgat atagatttag atctgattgg ttttccacaa agaattgaaa ttgttggcaa
     1321 tccaaattct cgatgtaaaa tattacttaa acgaggcgca aaaaaaattt atcaagatca
     1381 aatttcactt aaccgaagag gagttggctt acttcgtttt aactgtgata ttcaagaagg
     1441 agatcgtcta gaaatattca ttaatcagtc aggaaaagca tttggagaaa acgcgtggaa
     1501 aaaagaaact tattcaattc actatagccc tgtaatgaat gatgataagc ctgttattga
     1561 cgaatataca ggtaaggttg aatatcacgt agccatgaaa ttaaaattgc tagaatcagc
     1621 ttgtgagggc gaaaagattc aagtgaaaat gcttaacaaa accaagccaa cagctatatt
     1681 tatgattctt cctgattacg atgcttctaa tcatgttatt gcgagtattt ttattcgtca
     1741 gttatatttt attttagctg ataatgcgac aagaacgcgc ggaataaagt gtcatcgacg
     1801 tgttcgtttt atcctagatg aattcggtaa tatgccagct atagaaggta tggaaaatat
     1861 tataacagtt tgtttaggtc gtaatattag ttttgattta tatgtacaag attacgcaca
     1921 aattatcagt aagtatggtg aaaaagtagg tgaaacaatc aagtccaact gtggtaatca
     1981 tatatatata ttaaccacaa atggagatac agcaaaagaa tttagtcgta atttaggtac
     2041 aaaaactgta tatggaaaag agaagagtta cggtcagggc gatttgaaat caaatgtaag
     2101 tgaacgatct gatgataaac aactgttaga tgcaactcaa ttattacaat tgaaagaagg
     2161 cgaatcagtt atcctcagac cgctgaaacg acaagataga aaacgaaatc gcgtgagagc
     2221 ttatccgatt tttaatcgcg gatcaacggc aatgaaattc cgttatgaat atttaaatga
     2281 ggattttgat actactcaat tcttttcaga tttgaatatt cgaggagaac atgccgattt
     2341 tgatttggag agtaatcgta tagcaatata aatgattttt cttcccctac gtacacatat
     2401 gtgttacaat tgatttaaga taaatgtgta tgtgtagaaa ggagtgttaa tcaatgacta
     2461 ccattacatt tcgagtatct gataaagaaa aagcgtttat tcaagaaatg gctaagctta
     2521 acggtatctc tatttcagaa cttagtcgta aacagattat agaaggttta gaagatcaaa
     2581 ttgatttaca atcgtatgag cgtgctataa aggcgcatca agtgaaagat gaaagtattt
     2641 cttttgatga aatgaaaaag gaacttgaat tatgagtaaa cattttcatg tgagatttga
     2701 aaaagaagct caaaaagtat taaaaaagat ggatagattt caagcaaaat tgatattatc
     2761 ctggattgaa aaacatattg aaggtactga tgatccaaga caacatggta aaagtcttgt
     2821 tggtaaccgg agtggacaat ggcgatatag ggttggagat tatcgcttaa ttgcagagat
     2881 tcaagataat gaagtgatag tgttaatttt aaacatcgga cacaggagag atatttacga
     2941 taaataaaaa gagaggtgaa aaataatatg gcgatatttt ttataatcat tatttttggg
     3001 tttctggcaa taattgcttt tggagcgatt aagttaatgt ttaaattaat tggttttatt
     3061 attgatcaaa ctttgggatt tattttcgta aaaagagatc aacataaact taaaaaatat
     3121 gggcattatt gaaaaggcat ctacttcaga tgtctt
//
LOCUS       DASDYK010000193         3081 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.195, whole genome shotgun sequence.
ACCESSION   DASDYK010000193 DASDYK010000000
VERSION     DASDYK010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.195"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..414)
                     /locus_tag="U0308_002880"
     CDS             complement(<1..414)
                     /locus_tag="U0308_002880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317831.1"
                     /translation="MIFQRLLKTRDTEFYRVIQNGNIEDVFGYLLIHDKREPAEIDDF
                     KVFAKSNINKEAFSVNIKKNHIYTMFFHFTDLEEEQEIPKFTKVIRFIEGLLSFQPET
                     SHYVDNYLIKEKLIFEYPAEFEKIGEFAKYLVEVSG"
     gene            920..2275
                     /gene="dnaA"
                     /locus_tag="U0308_002881"
     CDS             920..2275
                     /gene="dnaA"
                     /locus_tag="U0308_002881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEM2317832.1"
                     /translation="MQSIEDIWQETLQIVKKNMSKPSYDTWMKSTTAHSLEGNTFIIS
                     APNNFVRDWLEKSYTQFIANILQEITGRLFDVRFIDGEQEENFEYTVIKPNPALDEDG
                     IEIGKHMLNPRYVFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLM
                     HAVGHYVQQHKDNAKVMYLSSEKFTNEFISSIRDNKTEEFRTKYRNVDVLLIDDIQFL
                     AGKEGTQEEFFHTFNTLYDEQKQIIISSDRPPKEIPTLEDRLRSRFEWGLITDITPPD
                     LETRIAILRKKAKADGLDIPNEVMLYIANQIDSNIRELEGALIRVVAYSSLVNKDITA
                     GLAAEALKDIIPSSKSQVITISGIQEAVGEYFHVRLEDFKAKKRTKSIAFPRQIAMYL
                     SRELTDASLPKIGDEFGGRDHTTVIHAHEKISQLLKTDQVLKNDLAEIEKNLRKAQNM
                     F"
     gene            2469..>3081
                     /gene="dnaN"
                     /locus_tag="U0308_002882"
     CDS             2469..>3081
                     /gene="dnaN"
                     /locus_tag="U0308_002882"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEM2317833.1"
                     /translation="MKFVIERDRLVQAVNEVTRAISARTTIPILTGIKIVVNDEGVTL
                     TGSDSDISIEAFIPLIENDEVIVEVESFGGIVLQSKYFGDIVRRLPEENVEIEVTSNY
                     QTNISSGQASFTLNGLDPMEYPKLPEVTDGKTIKIPINVLKNIVRQTVFAVSAIEVRP
                     VLTGVNWIIKENKLSAVATDSHRLALREIPLETDIDEEYNIVIP"
BASE COUNT         1049 a          542 c          516 g          974 t
ORIGIN      
        1 accagaaacc tctactaaat atttagcaaa ctccccgatt ttctcaaatt cagcaggata
       61 ttcaaaaatt agtttttcct ttattaaata attatcaaca taatgacttg tttctggttg
      121 aaaagataaa agtccttcta taaaacgaat aactttagta aattttggaa tttcctgttc
      181 ttcttctaaa tcggtaaagt gaaaaaacat cgtgtaaata tgattttttt tgatattcac
      241 tgaaaaagct tctttattta tattactttt tgcaaacact ttaaaatcat caatttctgc
      301 tggttcccgt ttgtcgtgaa ttagtaagta tccaaacaca tcttcaatat tcccgttttg
      361 tataactcga taaaattctg tatctctcgt tttcaaaagc cgttgaaata tcatttttca
      421 caacctcatt tatttgtctt ttttcttatt ctggtaaata gtttaacaca ttgtcgtaat
      481 gaaatccttt tccggaaagt gtggataact agttaataac acctttttat tgtggataac
      541 cttttcaatt agtttaaact tatacacaat tagtggttaa ttacacacaa tggcttgtgg
      601 ataattaaat ctaacaattt cgttacagat ttctttacac acaagttata cacaagttaa
      661 ctggctgtgg acaaccgttt ttcacatctg gacagttttg tggatagatt ttgtaagtcc
      721 ttgctatcag agtgattttc tgatattata attcctgtcg aatagaaata tagctgggga
      781 aaactaaagt tatccacaat acatttttac tttgtggata attttttaac agtgtttgga
      841 taaccttatc catggctttt tctatctgtg gataacttta tagcatccat ttacattaca
      901 taaaaaaggg gggttactag tgcaatcaat tgaagacatc tggcaggaaa cactgcaaat
      961 cgttaaaaaa aatatgagta aacctagtta cgacacatgg atgaaatcaa caaccgctca
     1021 ttcacttgaa ggtaacacgt ttattatttc agcgcccaat aattttgttc gcgattggtt
     1081 agagaagagt tacacgcaat ttatcgctaa cattttgcaa gaaataactg gtcgcttatt
     1141 tgatgtccgc tttattgatg gcgagcagga agaaaacttt gaatacactg tgattaaacc
     1201 aaatccagcg ttagatgaag atggcattga aattggaaaa catatgctta atccgcgtta
     1261 tgtttttgat acttttgtca ttggttcagg gaacagattt gcccacgcag catcacttgc
     1321 agtagccgaa gcaccagcga aagcatataa tccactcttc atttatggag gagttggcct
     1381 cggtaaaaca catttaatgc acgcagttgg ccactatgtt caacaacata aagataatgc
     1441 gaaagtaatg tacctttcca gcgaaaaatt caccaatgag tttattagct ctattcgtga
     1501 taataaaacc gaagaattcc gtacaaaata ccggaatgtg gatgtcttac ttattgatga
     1561 tattcaattt ttagcaggta aagaaggaac acaagaggaa tttttccata catttaacac
     1621 actttatgat gaacaaaagc aaattattat ttccagtgac cgaccaccga aagaaattcc
     1681 aacattggaa gatcgactga gatcccgctt tgaatggggc ctaattactg atattacgcc
     1741 accagactta gaaacacgga tcgccatttt acgtaaaaaa gcaaaagcag acggattaga
     1801 tattccaaat gaagtcatgc tttacatcgc aaaccaaatt gattcgaata ttcgcgagct
     1861 agaaggcgca ctcatccgag tagttgctta ttcttccctc gttaataaag atataacagc
     1921 tggtcttgca gcagaagcac taaaagatat tatcccctct tctaaatcac aagttattac
     1981 aattagtggt attcaagaag cagtcggtga atatttccat gttcgtttag aagattttaa
     2041 agcaaaaaaa cggacgaaaa gtatcgcatt cccgcgccaa atcgctatgt atctttcaag
     2101 agagcttaca gatgcctcat taccaaaaat cggtgatgaa tttggtggtc gagatcatac
     2161 aaccgtcatc catgcacatg aaaaaatatc gcaactacta aaaaccgatc aagtgttgaa
     2221 aaatgacctt gccgaaattg aaaaaaattt aagaaaagca caaaatatgt tttaatagac
     2281 ctgtgtacaa tgtggataac tgaaacatac ttacccacaa gttatcaaca tgtggaaaac
     2341 tttatgtcgc atggcttata acctacttat ccacaaatcc acagcgccta ttactattac
     2401 tacgattttt tattaattaa ttaaaggttt ttgaggtttt acaaaatata aaaaaatggg
     2461 ggatactcat gaaatttgtt attgagcgtg atcgtcttgt ccaagcagtc aatgaagtta
     2521 ctcgtgccat ctctgcaaga acaacgattc caattttaac ggggataaaa atagtcgtaa
     2581 atgatgaagg tgtaacacta actggtagtg attccgatat ttcaatcgaa gcatttattc
     2641 cattaattga aaatgatgaa gtaattgtag aagtggagag ttttggtgga attgtacttc
     2701 aatcaaaata ctttggcgat attgttcgtc gtttaccaga agaaaatgta gaaattgaag
     2761 tgacttctaa ctaccaaacc aacattagtt ctggccaagc atcctttaca ttaaatggct
     2821 tagatccaat ggaatatcct aaattacctg aagtaacaga cggaaaaaca attaaaattc
     2881 caattaatgt acttaaaaat attgttagac aaactgtttt tgctgtgtct gcgattgaag
     2941 ttcgtccagt acttactggt gtaaactgga ttatcaaaga aaataaacta agcgcagttg
     3001 caaccgatag tcatcgtcta gctttacgtg aaatacctct tgaaacagac attgatgaag
     3061 aatacaacat tgttattcct g
//
LOCUS       DASDYK010000194         3057 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.196, whole genome shotgun sequence.
ACCESSION   DASDYK010000194 DASDYK010000000
VERSION     DASDYK010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3057
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.196"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            50..355
                     /locus_tag="U0308_002883"
     CDS             50..355
                     /locus_tag="U0308_002883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317834.1"
                     /translation="MFSVFFKRLFPSNFSVSEEAFYYKEKAYPYSEYLIECDAKLIRF
                     NGGSRGMPYYRIVIINKDTRAEKLIRVYNAERRYKNANKHMQELMEELRNEINQYQA"
     gene            383..856
                     /locus_tag="U0308_002884"
     CDS             383..856
                     /locus_tag="U0308_002884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEM2317835.1"
                     /translation="MKSYPFFKYNMNIKTFFMFIVCFAILSLGLYFFITFESLRIWQF
                     FGIYTFFSAYTIYVLTTYVNGTVSVNSHALFYKKGFSDKKYLFNQYMLECDTRLHGRT
                     TSFLPFYTINILDLETGKETKIKIRNAAIVHRNGRKNFHLEIVNLAEQLKKIQAK"
     gene            complement(896..2944)
                     /locus_tag="U0308_002885"
     CDS             complement(896..2944)
                     /locus_tag="U0308_002885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HEM2317836.1"
                     /translation="MEIFLYVLALLVAIFISNLLNRFVPFVSVPLIQIGLGVLIAIMP
                     ITFDLQLNPELFLVMFIAPLLFNDGRQTDKAALWGMRMPILVLALGLVFATVVVIGYF
                     VHWMIPTIPLAAAFALAAALAPTDAVAVSSLSGRINLPKRIMNLLEGEALINDASGLV
                     AFQFAIAAMVTGVFSFMDASISFFVIAIGGILVGLILSWLKFRLLKWVRGLGMEDVTF
                     HMLIQILTPFIIYLAAEEIHVSGILAVVAAGIMHSMEQKKMDPQSVKLNVVSQSTWSV
                     IIFVLNGLVFLLLGTQLPAITEVVWNDSGSSNLQVMAYILSITAALILLRFLWVYISW
                     SIGAKQRQKQNKKTQLPKFRPVVLTSLSGVRGAVTLASALAIPFFLDDGSLFPQRSLI
                     IFIASGVILCTLVIATFILPLLAKSEEVTTEDERAETATRIRILRNVIRELKEQTLPE
                     TKAATDEVIEDYRRRIYDLQQNNSSNRGMDERERAKRLEIIQWERENTQKMTDEGRIV
                     ATDSYRYQHYLNMMEQAIKQRFRTKIKTAWMFLYRLIMLVIHPKKWGRITHKVKKGIS
                     KDSERFQAIRQLREENEVLIISKLKEQLTKENVDIIGPLITEHTIFLERVRKEHSPRG
                     KRAKFEQKKREVQVLAFQLERDIIQNMFEKGGISRDLARDLRQNLNMIETYLYDDFLE
                     "
BASE COUNT          953 a          616 c          531 g          957 t
ORIGIN      
        1 acttccggta ccatgggaat attttgttat tctttttgtc atagccctca tgttctcagt
       61 atttttcaag aggctttttc caagtaactt ttctgttagt gaagaagctt tttactataa
      121 agaaaaagca tatccttata gcgaatatct tatcgaatgc gatgctaaat taattcgctt
      181 taatggaggc tccagaggga tgccttacta tcgaattgtt atcataaata aagatacacg
      241 cgcagaaaaa ctaattcgag tatacaatgc agagcgtaga tacaagaacg caaataagca
      301 tatgcaagaa ctaatggaag aactgcgtaa tgaaatcaat caatatcaag cttaactaaa
      361 acatcttagg tggtgcacaa aaatgaaaag ctaccctttc tttaaatata atatgaatat
      421 caaaacattt tttatgttta ttgtttgttt tgcaatactt agccttggac tgtatttttt
      481 tattaccttt gagtcactcc gtatttggca attttttggt atatatacct tttttagcgc
      541 gtatactatt tacgtactga ctacttatgt taatggtact gtttccgtta atagtcatgc
      601 gctcttttat aaaaaagggt tttcggataa aaagtatctt ttcaatcaat atatgctgga
      661 gtgtgacacc agattgcacg ggcggaccac ttcttttctt cccttttaca caatcaatat
      721 tcttgattta gagacaggta aagaaacaaa aattaagatt cgtaatgcag ctatcgttca
      781 cagaaatggc agaaagaact tccatttaga aatagtaaat ctcgccgaac aattaaaaaa
      841 aatacaagct aaatagaaag ccctaagaac aagacactgt tcttagggct ttttgtcatt
      901 ctaaaaaatc atcatataaa tatgtttcaa tcatatttaa attttggcgt aagtctcggg
      961 ctaagtctct cgagatcccg cctttttcaa acatattctg aataatatca cgttctaatt
     1021 ggaaagccag cacttggact tcgcgttttt tctgttcgaa ttttgctcgc ttacctcttg
     1081 gactgtgctc ttttcttacg cgttctagga aaatagtatg ttcggtaatt aatgggccaa
     1141 tgatatcaac attctctttc gttagttgtt ctttgagttt agaaataatg agtacttcat
     1201 tttcttcgcg taattggcga attgcttgga atcgttcgct gtctttagaa ataccttttt
     1261 tcactttatg cgtgattcta ccccattttt tcgggtgaat gacaagcatt attagacgat
     1321 aaaggaacat ccaggctgtt tttatttttg tccggaagcg ctgtttgatc gcttgttcca
     1381 tcatattaag atagtgttga taacgatagc tatctgtagc aacaatgcgt ccttcatcgg
     1441 tcattttttg ggtgttttca cgttcccact ggatgatctc taatcgtttg gcacgttctc
     1501 tttcatccat gcctcgattc gaactattat tttgctgtaa atcgtaaatt cgtctgcgat
     1561 aatcttcaat tacttcatcc gttgccgctt tcgtttcagg tagcgtctgt tcttttaatt
     1621 ccctgattac gtttctcagg attcgaatcc gggttgcagt ttcagctcgt tcatcttccg
     1681 ttgtcacttc ttcacttttg gcaagtaacg gtaaaataaa tgtcgcaatc actaatgtac
     1741 aaagaataac acctgatgcg ataaaaataa ttagcgagcg ctgcggaaat agtgatccgt
     1801 catctaagaa aaacgggatt gcgagcgcac tggcaagtgt aactgccccg cgaacaccag
     1861 aaagcgatgt aagtacaacg ggtctaaact taggtagctg tgttttttta ttttgtttct
     1921 gtctttgttt tgcgccgatg ctccacgata tgtataccca taaaaagcgc agtaaaatta
     1981 aggcagctgt gatagacaaa atgtaagcca tcacttgtaa attactactt cctgaatcat
     2041 tccaaactac ttctgtaatc gcaggaagtt gtgtgcctaa aagtaaaaat actaaaccat
     2101 ttaaaacaaa aatgatcacc gaccaagtac tttgcgaaac gacatttaat ttcaccgact
     2161 gaggatccat tttcttttgt tccatcgagt gcataattcc ggctgcaaca actgccaaaa
     2221 tcccagaaac atggatttct tctgccgcta agtaaataat aaatggtgtt aaaatttgga
     2281 taagcatatg aaacgtaaca tcttccatgc caaggccgcg aacccatttt aacaatcgga
     2341 attttaacca actcaaaatg agcccaacta aaataccacc aatcgcaatg acaaaaaagc
     2401 taatacttgc atccataaaa ctgaaaacgc cggtcaccat cgctgcaatc gcgaactgga
     2461 atgccacgag tcctgacgcg tcgttgatta atgcctcacc ttcgagcaaa ttcataattc
     2521 gtttcggtaa attaatccgc ccagaaagag aactaactgc tacagcatcc gttggcgcaa
     2581 gagccgctgc taaggcaaaa gctgctgcta gtggaatcgt cggaatcatc cagtggacaa
     2641 aatatccaat cacgacaacc gttgcaaata caagtccgag cgctaatact aaaatcggca
     2701 ttcgcatacc ccaaagagct gctttgtccg tctgtcttcc gtcattaaat agcaatggcg
     2761 caataaacat cactagaaaa agttctggat ttaattgcaa atcaaacgta atcggcataa
     2821 tggcaattaa tacaccaagg ccaatttgga ttagtggtac cgaaacaaag ggaacaaacc
     2881 ggttgagtaa attagaaata aagatggcca caagtaatgc taaaacatat aaaaatatct
     2941 ccaatatgta tcgtcccctt tcgttttttc tcctatatta ttatgaagca aaataaccta
     3001 actcgcaaat ataaaacagc tttatttcta tgcatccatc ccgcttgcaa agaaata
//
LOCUS       DASDYK010000195         3022 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.197, whole genome shotgun sequence.
ACCESSION   DASDYK010000195 DASDYK010000000
VERSION     DASDYK010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3022
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.197"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(56..328)
                     /locus_tag="U0308_002886"
     CDS             complement(56..328)
                     /locus_tag="U0308_002886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317837.1"
                     /translation="MLFDIDGIEYNTDDYEQYDMYKQSVVRNVMYKAYRSLRSVVSDN
                     KCQGLKQKEVKEKINNNRSQVYQLLSFTDEEINSIFIFIEKYFPRI"
     gene            complement(334..645)
                     /locus_tag="U0308_002887"
     CDS             complement(334..645)
                     /locus_tag="U0308_002887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEM2317838.1"
                     /translation="MHMTSKHYNLINTNQLMKFYKCKEWLSLRQEALKRDNYECQRCK
                     KKGKQRQADCVHHIKYVKEFPAFALTLSNLECLCNQCHNEEHERLPNQQEKKIINQER
                     W"
     gene            complement(1225..1650)
                     /locus_tag="U0308_002888"
     CDS             complement(1225..1650)
                     /locus_tag="U0308_002888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014930909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF722 domain-containing protein"
                     /protein_id="HEM2317839.1"
                     /translation="MSKRLRKAQYKLIEDELRYYHSTKKEILEKRANIVMGSIHQEFK
                     DENQGGGSSGQISNEVEQRVMLLQVDKEIQRMSDIVRAIDTVLSTLSDEDKQLIHFRY
                     WDRSRPTWLWIACKLNISESTAKRKRKEIIYKIAARLGY"
     gene            complement(1663..1890)
                     /locus_tag="U0308_002889"
     CDS             complement(1663..1890)
                     /locus_tag="U0308_002889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317840.1"
                     /translation="MEEYVNISLDKYERLKMFENDKYEKDAKEFLKKFTNFTTIFGNQ
                     NEEYYTAHVNKEELKKLIEQRLGKTCEIEFY"
     gene            complement(1952..2107)
                     /locus_tag="U0308_002890"
     CDS             complement(1952..2107)
                     /locus_tag="U0308_002890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009930672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317841.1"
                     /translation="MFKTLSSFYFSMIFIIVLLRAFGFLSLAEAEFSLLLIISLVMVE
                     DMNGSRK"
     gene            complement(2108..2641)
                     /locus_tag="U0308_002891"
     CDS             complement(2108..2641)
                     /locus_tag="U0308_002891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012581464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HEM2317842.1"
                     /translation="MKIYHTETQEDFDALLEELKNEWYSWFFGEVIPSYDSELWERYK
                     QDTVVHIEEDGVSWGSLSYAKYLHPNTPIEKYKAKQDEVAKWFGGVTKAMKAFSSNGV
                     SMKNENNDKVNNPAHYTAGGIETLDYIKAKVSDYSSYAVGNILKYVSRYEHKNGIEDL
                     KKAQFYLNNLIEWMESD"
BASE COUNT          904 a          624 c          421 g         1073 t
ORIGIN      
        1 tctcccacgt tgtcacaccc tctcaaaaag ttttaaaatt tttacccggg gggtattaaa
       61 tccgtggaaa atatttttca ataaaaataa aaatagaatt tatttcttca tcagtaaatg
      121 aaagcaactg atacacttgc gacctattat tatttatttt ttctttcact tctttttgct
      181 tcaaaccttg acacttgtta tcagacacaa cagaccgcag cgaacgatat gctttataca
      241 tcacattgcg cactacactt tgcttataca tatcatattg ttcatagtca tctgtgttgt
      301 actcaattcc atcaatatca aataacaatc acatcaccat ctttcttgat taataatctt
      361 cttctcttgt tgattaggca aacgctcatg ctcttcgtta tgacattgat tacataaaca
      421 ttcgagatta cttaatgtta acgcaaaagc gggaaactct tttacatatt taatatgatg
      481 tacacagtcc gcttgacgtt gcttaccttt cttcttgcat cgttggcatt catagttatc
      541 acgcttcaat gcctcttgcc tgagagacaa ccactctttg catttataaa acttcatcaa
      601 ctgattagta ttgattaagt tataatgttt agatgtcata tgcatatgta ttacccctat
      661 ataaaaagcc caacactaat gtgctggact tcattgttct atgtatccgt agttataaaa
      721 ccaggcggac ttctacggta gcattcgtca atgctttgtc tttcttctaa ttaaccctca
      781 gacgggctcg cggacgtcag aaagcggaaa ttataaagcc ttcccatcag aacatatctg
      841 ctattaaata gagagaaggt attgtcgttt aaatatactc ggcaaggatt tgcaccttgc
      901 aacatcaagc cgaagcgtga tataggactc atccataacg tctacctgtt ccgtcacgag
      961 tattgagatt gaacaagaag gtgtctcttg ttgggactag tgagattgga atgggatgcg
     1021 tctcccatca agaccaacga tcagataata agcctctgtc cggcaacata gcaacctcct
     1081 gctatatcat catcatgtga ttatatatga gaagtgaagt gcagacttaa tatattattt
     1141 tattttgtaa tcatcttcac ttctctactc tataatatta acatggaaaa acatgtcaaa
     1201 cgggtcataa acgggtcaac ttttttaata acctaatcgc gcggcaattt tatatataat
     1261 ctctttccgt tttcttttag ccgtactttc actgatattc aacttacaag caatccacaa
     1321 ccaggtaggt ctactcctat cccagtatct aaaatgaatc agttgcttat cttcatcaga
     1381 caaagtgctc aataccgtat caattgctct gacaatatca gacattcttt gtatttcttt
     1441 atcgacttgt aatagcataa cacgttgttc tacttcattt gatatctgac cagatgaacc
     1501 accgccttgg ttttcgtctt tgaattcttg atgtatagat cccatgacaa tgtttgcacg
     1561 tttttctagt atttcttttt ttgtagaatg atagtaacga agttcatctt caataagttt
     1621 atattgtgct ttacgtaatc gttttgacat ttaatcactc tcctaataaa attctatctc
     1681 acacgttttg cctagtcttt gttcaattag ttttttcagt tcttccttgt tgacatgcgc
     1741 cgtgtaatac tcttcatttt gatttccaaa tatcgttgtg aagttagtaa acttttttag
     1801 aaattcctta gcatcttttt cgtatttatc attttcaaac atttttaacc tttcatattt
     1861 atctaaactg atatttacat attcctccat tgtcaaccag ccccaatttt tttatatttt
     1921 agcaatactt gtaaaggcga agagtcactt gtcatttacg actcccattc atatcctcaa
     1981 ccatgacaag agaaatgatt aatagtaaac taaattctgc ttctgcaaga ctaagaaagc
     2041 cgaaagcgcg caataatacg ataatgaaaa tcatagaaaa ataaaatgaa cttaatgttt
     2101 taaacattca atcactctcc atccattcaa tcaaattatt taaataaaat tgcgcttttt
     2161 ttaaatcctc aatgccattc ttgtgctcgt atcttgagac atatttaagt atgtttccta
     2221 cagcatatga cgaataatca gatacttttg ccttgatgta gtctagtgtt tcaataccac
     2281 ctgctgtgta atgtgcagga ttatttactt tgtcgttatt ttcatttttc atagatactc
     2341 cattggatga aaatgctttc atggcttttg taacgccacc gaaccacttt gcaacttcgt
     2401 cttgtttcgc tttgtatttt tcaattggtg tgttggggtg taaatattta gcataagaaa
     2461 gactccccca acttactcca tcttcctcta tatgcacaac agtatcttgc ttataccgtt
     2521 cccaaagttc cgagtcatat gacggaataa cctctccgaa aaaccagcta taccattcat
     2581 ttttcaattc ttccaacaat gcatcaaaat cttcttgtgt ttctgtgtga tatattttca
     2641 ttcgtttttc ctccttgttt aattgtgtac tcggcgaatt atgtgattta gataagtgcg
     2701 gcattggggc aaacaatatc accaacaaaa ctccaaaaaa cactccaggt ataaaagcaa
     2761 tactacctgc taccattatc atatttccta tctgcttgat ttccacatat aacaagaaat
     2821 cttttcatca atgtcatccc tccattttcc gccgactata ccgttacaaa acccattttg
     2881 taacacgtaa ccactcaaat cccttctgac agaacgtggt tacaggttac aaaaaaatcg
     2941 gcgaaaaagt ttttattttt gtactctttt cttaaatata aataaatata tatacttttt
     3001 attaataaaa aaatgtaact tg
//
LOCUS       DASDYK010000196         2920 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.198, whole genome shotgun sequence.
ACCESSION   DASDYK010000196 DASDYK010000000
VERSION     DASDYK010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2920
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.198"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(70..294)
                     /locus_tag="U0308_002892"
     CDS             complement(70..294)
                     /locus_tag="U0308_002892"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317843.1"
                     /translation="MAKHAIDELLQAYQKNRNQFAVNQQINPNTVNNYAKRNTKVEKI
                     PSDVLNALAKELNISMDEVYEQLLKYQSEN"
     gene            complement(402..2696)
                     /locus_tag="U0308_002893"
     CDS             complement(402..2696)
                     /locus_tag="U0308_002893"
                     /inference="COORDINATES: protein
                     motif:HMM:NF037164.1,HMM:TIGR04226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopeptide-forming domain-containing fimbrial
                     protein"
                     /protein_id="HEM2317844.1"
                     /translation="MNKNKKMSLKVFMLIIVSILLLNVCVPRLANAEHIKVDPLNPNI
                     NEKNKLVIEKNPKKLGYEVNIFGNSRMKIIDKDKDRKTANAYKFEDLEKYKYSRFEDN
                     YSSKMIEITSPTTTDKVAVTYNYVGKYNNSPVGATVTYTDFTYAKVPSANYTQGILEL
                     SESLFSGYWYCNLSSMNVNYQFFDVNTKKPIVIDNDVIVSINSLNLYEFAQYLEKKNE
                     NNVYTTTDTFVNEQADPYKANSKVWAGTNKELDNYDQLGENGFSKGTISFQINDNPFT
                     IRVGKDASQHKWGVWNSLSSANFNVNPQSPTKSITDDDEVEVEKNELNVPYLNQEFTY
                     NVKQVVGTLGVDLLEKYKSMIFTDVLPKEVDFIGAELVDQDGKEIESSGKVDYNEKTN
                     TVTFEASQDFLQKVVQYNGENYSLAIHVKANEHAKEDSSFKNTASVTINDKSKGTNEV
                     ETTTPVLPRLSKKILVGDKEEDRQDAKVNDLVTFKVISDLGNSKNLKSVVIEDTLENV
                     FTFQNITVKSNGQDITTEGDTKLENGIVSWTAKDPKSLVGQTLESYIEVKLNDADNFS
                     EFINAKTGKIEIPNVAKLIVNEEIFNSNKVLVTPPTKENTTIFKQIKKSDGSNTDNIL
                     LKKGEAIMYDISYNFADKQFSELQLIDDLEDVFQITEVNIQTANKDITDEGNLVIDKK
                     SQKVIWTAKEPKRWSGKEIKVLISATLSKDASLERYALEKNQYKIPNIAQAIVNDKVY
                     KSNTVYANVEKPLEIKEIPKTGTF"
BASE COUNT          878 a          510 c          379 g         1153 t
ORIGIN      
        1 aagcatctcc cttttatata ttcggttcta tagaactatt ataagctcta tagaaccgaa
       61 agtcaatact taattttcgc tttgatactt gagcagttgt tcatacactt catccataga
      121 aatatttaat tctttagcaa gagcatttaa cacatcagaa ggaatttttt caacttttgt
      181 gttcctttta gcataattat taacagtatt aggatttatt tgttgattaa ctgcaaattg
      241 gtttcgattt ttctgatatg cttgtaagag ttcatctatt gcgtgtttag ccatttatat
      301 cagctccttc tttgtataat tataatacaa aaaatgaaat tcggctcaaa gatttatctc
      361 ttactcctaa aagaatgttc aaaaactcaa gtttcaagct actaaaaagt cccggtcttt
      421 ggtatttctt ttatttcaag tggtttttca acgttagcat agactgtatt agatttatac
      481 accttatcat ttactattgc ttgtgcaata ttaggaatct tatattgatt tttttcaaga
      541 gcatatcttt ctaaagaggc atctttagaa agagtagcag aaatcaatac tttaatttct
      601 ttcccactcc aacgtttagg ttcttttgct gtccatatca ctttttgaga ttttttgtca
      661 attactaaat taccttcatc agtaatatcc ttattggccg tttgaatatt tacttcagta
      721 atttgaaaga catcttctaa atcgtctatt aattgtaact ctgaaaactg cttatcggcg
      781 aaattataag aaatatcgta cataatcgct tcaccttttt tcagcaaaat attatcagtg
      841 ttactaccat ctgacttctt aatttgttta aagatagttg tattttcttt tgttggggga
      901 gtaactaata ctttgttcga attaaaaatt tcctcattaa caataagttt agcaacgttt
      961 ggtatttcga ttttgccagt tttggcatta ataaattcac taaaattgtc agcatcattt
     1021 aatttcactt caatatatga ctctaacgtt tgtccaacta aactttttgg atcttttgct
     1081 gtccatgaaa caattccatt ttccaatttc gtatcacctt cagtagtgat atcttgtccg
     1141 ttactcttta cagtaatatt ttggaatgta aatacgtttt ctaaagtgtc ttcaataaca
     1201 acagatttta gatttttact attgcctaaa tcactaatca ctttaaaagt tactagatca
     1261 tttactttag catcttgcct atcctcttct ttatcaccaa ccaaaatttt ctttgacaac
     1321 cgcggtaaaa ctggagtagt ggtctctact tcgttagttc ctttactttt gtcgttaatc
     1381 gtaactgatg ctgtattttt aaacgaacta tcttctttag catgttcatt ggctttcaca
     1441 tgaatagcaa gcgagtaatt ttcaccatta tattgcacaa ccttttgcag aaaatcttgt
     1501 gatgcttcaa aggtaactgt gtttgttttc tcgttgtaat caactttacc agaggattct
     1561 atttctttac catcttgatc tactaactca gcgccaataa aatcgacttc ttttggcaaa
     1621 acgtccgtga agatcatact tttatatttt tctaacaaat caacacctag tgtccctact
     1681 acttgtttaa cattgtaagt aaactcttga ttaagatatg gaacatttag ttcatttttt
     1741 tcgacttcga cttcatcatc atctgtaata gatttagttg gactctgagg atttacatta
     1801 aagtttgcac tagacaatga attccaaacg ccccatttat gttgacttgc atctttccca
     1861 acacgaattg taaatgggtt atcattaatt tggaatgaaa tagtaccttt cgaaaaacca
     1921 ttttcgccta attgatcata attgtctaac tctttattag tacctgccca cactttacta
     1981 ttcgctttat atggatcagc ttgttcatta acaaaggtat cagtagtagt gtagacatta
     2041 ttctcatttt tcttttcaag atattgtgca aattcataca ggttcaaaga gttaatactt
     2101 acaatgacat cattatctat tacaataggc tttttagtat tgacatcaaa aaattgataa
     2161 tttacattca tagatgatag attacaatac caatatccgc tgaatagaga ctcactcaat
     2221 tctaaaatac cctgagtata atttgcggaa ggtacttttg cataggtaaa gtccgtataa
     2281 gtaaccgttg ctccaacagg actattgttg tatttgccaa cataattata agtgacagca
     2341 accttatcag tagttgtcgg gcttgtaatt tctatcattt tgctagaata attatcttcg
     2401 aagcgactat atttgtattt ttccaggtct tcaaacttat atgcgttagc agttttacga
     2461 tctttatctt tatcaataat tttcatacga ctatttccaa atatgttaac ttcataccct
     2521 aattttttag ggtttttttc aataaccagt ttgtttttct cgtttatatt tggatttaat
     2581 ggatctactt ttatatgctc tgcattagct aaacgaggca cacatacatt taataataaa
     2641 atagatacaa taatcagcat aaaaacctta agggacattt tcttgttttt attcatattt
     2701 tcctcctcct ttactattat ttactgttct ttttcgttaa cttacttcaa tttaatcacc
     2761 ccttttaaaa atttttattt tctaacctaa ttaatgaaat aaaaaaaaca cctttaaaaa
     2821 ggtgtttccc ttgatgtagt tagaaatctt ttatctaatt caattgcaat tacatgggtt
     2881 tcatcggttt tatactcaaa tgcaggatat ttcattttta
//
LOCUS       DASDYK010000197         2912 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.199, whole genome shotgun sequence.
ACCESSION   DASDYK010000197 DASDYK010000000
VERSION     DASDYK010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2912
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.199"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            60..371
                     /locus_tag="U0308_002894"
     CDS             60..371
                     /locus_tag="U0308_002894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003746788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317845.1"
                     /translation="MEKQTATWKKALFWFAYVVAGICFLLTIVAFIVGFIHHMHDTGG
                     WRSVIQILETPITGFVKMTGGYIGKGILEVIILIIVSYVLPIFFCFATHYLKVKRREM
                     A"
     gene            500..1453
                     /locus_tag="U0308_002895"
     CDS             500..1453
                     /locus_tag="U0308_002895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEM2317846.1"
                     /translation="MPSKKKKIVVIGRSNLQNLYIHTVLFKKIPAEIYLIDDQAKTSV
                     QDFDYASYYHADATIHAGTFNECRNADIVVFFQEEMSNQLVSKEDNVTLIKEKVKKMM
                     ASGFRGIVLVATAESNVVAALIKRFSGLPVNQIITLGTMLATSYFQVEIAKLFKISPK
                     NVHGYIIGDNAEDVIPVWSRAFLGGKPILSYLAEEQKRISAEDLQNLTKMITKIPDFP
                     FENKDGCSFRFSTVTVLAELTEVVLRDEARVITVGVEVKDAYGLENPVFISVPAVIGA
                     EGVRELLELHLSDDEQKELKQIATKTTEKLEELQLNKGGIS"
     gene            1453..1725
                     /locus_tag="U0308_002896"
     CDS             1453..1725
                     /locus_tag="U0308_002896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0223 family protein"
                     /protein_id="HEM2317847.1"
                     /translation="MEYSYPLNPDWTTEEMTIVVQFLEAIERAYEKGIDTLELKEKYR
                     AFKQVVPAKGEEKRIGIDFEKASGYSAYKVMQLVKNATTSKIKMQP"
     gene            1747..2277
                     /locus_tag="U0308_002897"
     CDS             1747..2277
                     /locus_tag="U0308_002897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEM2317848.1"
                     /translation="MDISQIKAEVVTPETGIHVGDQTAPVKVMSFVNLRCPFCREWNE
                     KSKDVLTEYIQAGKIELIIKPFDKEKESLQRGNVTHRYLDYSKPEETRETINKIYSKQ
                     DEWGSLTLPEVATYMESELGLTEQDNKAASEKIVAEANAANVVFVPTVIVGEHIFDEH
                     ISPEELRSLLDGELAK"
     gene            complement(2335..>2912)
                     /locus_tag="U0308_002898"
     CDS             complement(2335..>2912)
                     /locus_tag="U0308_002898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEM2317849.1"
                     /translation="GFYTHMKTRFALQILYMISTTFLRHLKRLNRQTDEIEKELHESM
                     KNKQLYDLMGIEKSLVYFVTALKSNKVVLDKMMRQNIVKMYEEDQDLLEDVIIENRQG
                     IEMAEVHSNILSGMMDAYASIISNNMNIVMKFLTSFTIILTIPTMVFSFYGMNVKLPF
                     MNTPMAWMLTLGFAFGIAGALAIVFWRRKFF"
BASE COUNT         1015 a          480 c          566 g          851 t
ORIGIN      
        1 aggagtataa tgtaacaagt gaatgtaaca agtcaaatct aattgaatca ggtgaaaaaa
       61 tggagaaaca aacagcaact tggaagaaag ctctattttg gtttgcgtat gtagtagcag
      121 gaatttgttt tttattaacg attgtggcct ttattgtagg atttattcat cacatgcatg
      181 atacaggtgg atggcgttcc gttattcaaa ttctcgaaac tccaatcaca ggctttgtca
      241 aaatgactgg tggctacatc ggtaaaggaa tcttagaagt aattattctg attatcgtta
      301 gttatgtatt accgattttc ttctgttttg caacgcatta tttaaaagta aaacgacgtg
      361 aaatggctta aaataagatt attttgtaaa aagcaaagcg aatgagcatt gctttttatt
      421 tatgtggtca agttatttta tttttgcctc ggaagcatgc taaaataaca ataagagact
      481 tgatgaggag gagatgcata tgccatctaa gaagaaaaaa attgtcgtta tcggcagaag
      541 taatctacaa aatctctaca ttcatacagt tctttttaaa aaaataccag ccgagattta
      601 cttaatagac gatcaagcta aaacaagcgt acaagatttt gactatgcga gttattatca
      661 tgcagatgcg accattcacg caggaacctt caacgagtgt cgcaacgctg atatagtcgt
      721 cttttttcaa gaagaaatgt ccaatcaact cgtttcaaaa gaagacaatg tcacgctaat
      781 caaagaaaaa gtgaagaaaa tgatggcgag cggtttccga ggaattgtct tagtggcgac
      841 agctgaaagt aatgtcgttg ccgcgttaat taaacgtttc tccggcttac ctgtaaatca
      901 aattattacg cttggcacca tgcttgcgac gtcttatttt caagtggaaa ttgctaaatt
      961 atttaaaatt agccctaaaa atgtacacgg atatattatt ggcgataatg cagaagatgt
     1021 cattcctgta tggagtagag cctttcttgg aggcaaacca attttaagtt atttagctga
     1081 agagcaaaaa agaatctcag cagaggattt acaaaattta acaaaaatga ttactaaaat
     1141 tccagatttt ccttttgaaa ataaagatgg ttgttctttt cgatttagca cggtaactgt
     1201 tcttgctgaa ttaaccgaag ttgttttgcg cgacgaagca agagttatca cagttggtgt
     1261 tgaagtgaaa gacgcatatg gtttagaaaa tcctgtcttc attagtgttc cagctgtcat
     1321 tggcgcagaa ggagtcagag aactacttga attacatctc tcagacgatg aacaaaaaga
     1381 attaaaacaa atcgccacaa aaaccaccga gaaattggaa gaattgcaac ttaacaaagg
     1441 agggattagt taatggaata cagttatcca ctaaatccag actggacaac cgaagaaatg
     1501 acgattgttg tgcaattttt agaagctatt gagcgagcgt atgaaaaggg catagatacg
     1561 cttgagctca aagaaaaata tcgagcattc aaacaagtag tccctgccaa aggagaagaa
     1621 aaacggattg gtatcgactt tgaaaaagca agtggctatt cggcctataa agtcatgcaa
     1681 cttgtaaaaa acgcaactac tagtaaaata aaaatgcaac cataattaag aggaggaatt
     1741 tttttcatgg atattagcca aattaaagca gaagtagtaa caccagaaac agggatacac
     1801 gtaggagatc aaactgcgcc agtaaaggta atgtcattcg ttaacttacg ttgcccattt
     1861 tgtagagaat ggaatgaaaa atccaaagac gttctaacgg aatatattca agcagggaaa
     1921 attgaattaa tcattaaacc atttgataaa gaaaaagaat cgttacaacg aggaaatgta
     1981 acgcatcgct acttagatta ttccaaaccg gaagaaaccc gtgaaacaat caataaaatt
     2041 tatagtaagc aagatgaatg gggtagccta acgcttcctg aagtagctac ttatatggaa
     2101 tccgagttag gcttaacaga gcaagacaat aaagctgcat cagaaaaaat tgttgctgag
     2161 gcaaacgcgg caaatgttgt ttttgtaccg actgttattg tgggtgaaca tatttttgat
     2221 gagcacatta gtcctgaaga attacgttcg ttactagacg gcgaattagc taaataaaaa
     2281 aagcgaatgt attggcctaa aattttaggt aatacattcg ctttttgttt atttttaaaa
     2341 gaatttcctc cgccagaata caatcgcaag cgctccggca atcccgaatg caaaaccgag
     2401 cgtcagcatc caagccattg gtgtattcat aaacggtaat ttcacgttca ttccgtaaaa
     2461 actaaacacc atcgttggaa tcgtcaagat gatggtaaaa gaagtaagga atttcatcac
     2521 gatattcata ttgttcgaga taattgaagc ataggcatcc atcatcccgc tcaaaatatt
     2581 cgagtggact tccgccattt caataccttg gcgattttca ataataacat cttctaataa
     2641 gtcttgatct tcttcgtaca ttttaacaat attttgacgc atcattttat caagtacgac
     2701 tttattcgat ttaagggcgg ttacaaagta aactaaactt ttttcaatcc ccattaaatc
     2761 ataaagttgt ttatttttca tagattcatg tagttctttt tcgatttcgt ctgtttgacg
     2821 gttcaagcgt tttaagtgac gcaagaaagt agtggaaatc atgtataaga tttgcaatgc
     2881 aaaccgtgtt ttcatatgtg tataaaagcc ct
//
LOCUS       DASDYK010000198         2782 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.200, whole genome shotgun sequence.
ACCESSION   DASDYK010000198 DASDYK010000000
VERSION     DASDYK010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2782
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.200"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            182..2038
                     /locus_tag="U0308_002899"
     CDS             182..2038
                     /locus_tag="U0308_002899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapB repeat-containing protein"
                     /protein_id="HEM2317850.1"
                     /translation="MKLSKFFTIIALSATVTSSLPIPMVKAESTTANETKIENQLPKT
                     DLKETPKEKTTNNNLKNQLVQAGTKTYNDYFPDDNLAKAVAEKMNKNVDESVTVEELA
                     KITKLDARSQGIEDSTGIEYLTGLEILYLEDNQLKSIDVSKNLNLKDLACSNNPLVNL
                     DVSKNLALEELTCENNELTQLDVSKNTALEYLYCPRNQLTKLDVSKNSALRYLACDVN
                     QLTSLDVSQNPALTNLGCTKNQLTDLDVSQNPNLSTLVCSDNQLTNLDVSQNQALAYL
                     TCDNNGLKNIDIDQNLALIELSCENNQLTNLDTTQNLALEILYCDDNQLTNLDVRKNV
                     NLLILSCNNNQLTNLAVGETILDVSCNNNQLKDISSLPDYLTAENGEYQAMDQTLVGP
                     IQTTQNNTLVYAVPTDLLDKDGNIVSIIKPENGGVYDAATRTITWENLPDSGEVSYTF
                     ESNDYGVFSGRVTVPYTGKETVSISSDDEISYKEGTTKTEEAFLTDIHASVTPATETI
                     TSNFADVVDLQTPGKYVVTLSVAESDITKDVIVYVTEEPSKDNPVAPVPPKDPDNKVA
                     DNDQNTEKPQVKVDEKTLPKTGDITSLSLSLAGIICLSFGILFFIKRKKKTV"
     gene            complement(2193..>2782)
                     /locus_tag="U0308_002900"
     CDS             complement(2193..>2782)
                     /locus_tag="U0308_002900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317851.1"
                     /translation="HNNLLNGEVFPYQICLESTMEYSRFMLWFEKEVQKIVKELWNQH
                     FIIKLTLSQLHFRETILFLEHLKDFSKRITIEFIGEDTPEIKKHFSVQEQEAFFIGKL
                     RMLKKWKFIISKHIEGCSVEQTLAFTPCLHEIKYTMSQQARMEENIIDLHMFIDFWEY
                     WATHKKLKFVVEVKEKDFITKSLMHKKVHVQFENA"
BASE COUNT         1006 a          478 c          460 g          838 t
ORIGIN      
        1 tcttaagtat tgttccaata ttataatcga ccgcaactcg taacattttc gacacaaaat
       61 agccgatatt ttgtatcttc tggtagtttc tatataaaat ctcatcttca cgtgctaata
      121 tatattttgt ttgaacactg ctgactatac taaacaacag caactgaagg agcaactaac
      181 tatgaaactg tccaaatttt ttacaataat tgcattaagt gccaccgtta caagtagcct
      241 accgatacca atggtaaaag cagagagcac aaccgcaaat gaaactaaaa tcgaaaatca
      301 attaccaaaa acagatttaa aagaaacacc gaaagaaaaa acaacgaata acaacctgaa
      361 aaatcaactt gtccaagcag gaaccaaaac ttataatgat tactttccag atgataattt
      421 agctaaagcg gtagcagaaa aaatgaacaa aaacgtggat gaatctgtaa ctgtcgagga
      481 attagctaaa ataactaaac tagatgcacg gagccaaggc atagaagata gcactggaat
      541 cgaatatttg actggattag agatacttta tcttgaggat aatcaactaa aaagtataga
      601 tgtcagtaaa aatctaaatc taaaagactt ggcttgctct aacaacccgt tagtgaattt
      661 agatgttagt aaaaatcttg ctttagaaga attgacttgt gaaaacaatg aattaacaca
      721 actagatgtt agcaaaaata cagctttaga gtatttgtat tgccctagaa atcagttaac
      781 aaagctagat gttagtaaaa actccgcttt acgttatttg gcttgcgatg tcaatcagtt
      841 aaccagttta gatgttagtc aaaatccagc tttaacaaat cttggttgta ctaaaaacca
      901 acttacagat ttagatgtta gccaaaatcc gaatttaagc actttggttt gttctgataa
      961 ccagttaacc aacttagacg ttagccaaaa tcaagctcta gcatatttga cttgtgataa
     1021 caatgggttg aagaatatag atattgatca aaatctagct ttaatagagt tatcttgtga
     1081 aaacaatcaa ctaacgaatt tagatactac ccaaaatcta gctttagaga ttttatattg
     1141 cgatgacaat cagctaacga atttagatgt tagaaaaaac gtaaatttat taattttatc
     1201 ttgtaataac aatcaactaa cgaatctagc tgttggagag acaatattgg atgtaagctg
     1261 taataataac cagctaaaag atattagttc cttaccagat tatcttactg ctgagaatgg
     1321 cgagtaccaa gcaatggatc aaacattagt aggtccaatc caaacgacac aaaataatac
     1381 acttgtatac gctgttccta cagacctgtt agataaggat ggtaacattg tttccatcat
     1441 aaaaccagaa aatggtgggg tttatgatgc agctactaga actattacgt gggaaaattt
     1501 accagatagc ggagaagtga gttacacatt tgaaagcaat gactatggtg tgttttctgg
     1561 aagagttact gtgccatata caggaaaaga aactgtcagc atttctagtg atgatgagat
     1621 tagttacaaa gaaggcacta caaaaacaga ggaagccttc ctcacagata tccatgcaag
     1681 cgtaactcca gcaacagaaa ccatcactag caattttgct gacgtagtag acttacaaac
     1741 acctggtaaa tatgttgtaa cactaagcgt ggcagaatca gatattacga aagacgtcat
     1801 tgtgtatgtg acagaggaac caagtaaaga taatcctgtc gctcctgttc caccaaaaga
     1861 tccagataac aaagtagcag acaatgacca aaatacggaa aaaccccaag taaaagtaga
     1921 cgaaaagacg ttgccaaaaa caggtgatat tactagctta agtttgtcat tggctggaat
     1981 tatttgctta agctttggta ttctattttt catcaaacga aagaaaaaaa cagtttaata
     2041 atgagtaata gccttatcat aagtgataag actatttttt attctatcaa tatctacttt
     2101 tcagattact tattggcaaa aaaatacagt caaaaagctc cctcaggctt cttgagtgat
     2161 agaataaaca gagctcggct ataattcttc cgctacgcat tctcaaattg tacgtggacc
     2221 tttttatgca tcaaagactt cgtaataaaa tctttctcct tcacctcgac tacgaatttc
     2281 aattttttat gtgttgccca atattcccaa aaatcgatga acatgtgcaa atcgataata
     2341 ttttcttcca ttcgtgcttg ctgactcatc gtgtatttta tttcatgtag acacggggta
     2401 aaagcaaggg tttgttccac tgagcagcct tcgatatgtt tagaaataat gaatttccat
     2461 ttttttagca ttcttagttt ccctataaaa aacgcttctt gctcttggac agaaaaatgt
     2521 tttttaattt ctggtgtgtc ttcaccgata aattcaatcg ttatccgttt actaaaatct
     2581 tttaaatgct ctaaaaatag aatggtttcg cggaaatgta attgggataa tgttagtttg
     2641 ataataaaat gttgattcca aagttctttc acgatttttt ggacttcttt ttcaaaccac
     2701 aacataaatc ttgaatattc catcgtgctt tctaaacaaa tttgatatgg aaaaacttcc
     2761 ccatttaata aattattgtg tt
//
LOCUS       DASDYK010000199         2757 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.201, whole genome shotgun sequence.
ACCESSION   DASDYK010000199 DASDYK010000000
VERSION     DASDYK010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.201"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..190
                     /locus_tag="U0308_002901"
     CDS             <1..190
                     /locus_tag="U0308_002901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003769971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317852.1"
                     /translation="DGEVDEDYYVKLIKLDVEAFLYDKYDKETDLSDQLHDEAETLKE
                     YHLSLDDDGTYMVKEVAK"
     gene            376..570
                     /locus_tag="U0308_002902"
     CDS             376..570
                     /locus_tag="U0308_002902"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317853.1"
                     /translation="MTKQSRKNKEYVYELICSFWNNEKSLGIFKTRAAAERAMYDDID
                     DTPKQIYTDYYEIYKRPIYE"
     gene            585..812
                     /locus_tag="U0308_002903"
     CDS             585..812
                     /locus_tag="U0308_002903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3850 domain-containing protein"
                     /protein_id="HEM2317854.1"
                     /translation="MTKTHELKITPEFFAAVTEGRKTFEIRKNDRDFQVGDILILREW
                     NHEFSGFQIAVEVVYMTDYEQKDGFVVLGIV"
     gene            824..1225
                     /locus_tag="U0308_002904"
     CDS             824..1225
                     /locus_tag="U0308_002904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003723954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317855.1"
                     /translation="MTSTIKISEKDKVFQIATKSGWAVKVGMQVTIDGIDFAIYPFYA
                     KSNVFIQVSEVESGGVLINFPVDFIDVFVLDTRDKAIEYYKDNVIPLVQKKIEVNGLD
                     EFRKAIKNAKNYILENFGERPQIKKFEEANE"
     gene            1222..1704
                     /gene="ssb"
                     /locus_tag="U0308_002905"
     CDS             1222..1704
                     /gene="ssb"
                     /locus_tag="U0308_002905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEM2317856.1"
                     /translation="MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRPFKNAQGEQ
                     EADFINCVVWRKPAENAANFLKKGSMAGVDGRVQTRNYEDSDGKRVFVTEVVAETVQF
                     LEPKNINAEGATSNNYQNQANYSNNNKTSSYRADTSQKSDSFADEGKAIDINEDDLPF
                     "
     gene            1725..1916
                     /locus_tag="U0308_002906"
     CDS             1725..1916
                     /locus_tag="U0308_002906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317857.1"
                     /translation="MTAETALENINNLSKRLASIRFMANAIAEVTNYQISEIEQMGDE
                     EIEAKYTAYVINEANEYAK"
     gene            1861..2265
                     /locus_tag="U0308_002907"
     CDS             1861..2265
                     /locus_tag="U0308_002907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1064 domain-containing protein"
                     /protein_id="HEM2317858.1"
                     /translation="MRRNIRRTSLTKQTSTRNKYNAKKVVIDNIKFDSKAEAAYYQQL
                     KLLKMTGEVVSFDLQPEFVLQESFRKNGKLYRAIKYKADFLVRYNDGHEELIDVKGML
                     TNEFILKRKLFEMRYMQSIKCVKLKGGEFLEV"
     gene            2269..2652
                     /locus_tag="U0308_002908"
     CDS             2269..2652
                     /locus_tag="U0308_002908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2481 family protein"
                     /protein_id="HEM2317859.1"
                     /translation="MAVMEMTKNKTRQREIISYIANNDVELNELLKLQKELNNLMKEN
                     TEEKQKTYWTKTFDRIVKKKKWAEITVREFADLRNAGLTCYAIAEHFKVSKSTVLNYT
                     QRNKKEYYQIFDMNEYQRNKEIWND"
BASE COUNT         1054 a          368 c          618 g          717 t
ORIGIN      
        1 cgatggagaa gttgatgaag attattatgt taagttaata aaattagacg tagaagcatt
       61 cttatacgat aaatatgaca aagaaacaga tttgagtgat cagttacacg atgaagctga
      121 aacattgaaa gagtatcatt tgagtttaga tgatgacgga acttacatgg tgaaagaggt
      181 ggcgaaataa tgtgtgagta ttgtaagaat gactctatga tgaataacga gcctttacta
      241 agttttgatg aagagtataa agaacctggt gttgttagac tagatagcac tggcaactta
      301 ggagttttca gctactacgg tttaacagct aggaatatca attactgtcc aatgtgcgga
      361 aggagtttgg aataaatgac taaacaaagc cggaaaaata aagaatacgt ctatgagttg
      421 atatgtagtt tttggaacaa tgagaagtcg ctaggtatat tcaaaacaag agcagcagcg
      481 gaaagggcta tgtatgacga tatagacgac acgccgaagc agatttatac agattattac
      541 gaaatatata aacgaccaat atacgagtga aaggaagcgt ctaaatgact aaaacacacg
      601 aattaaaaat aacacccgaa ttttttgcag ctgtgacgga aggacgaaaa acgttcgaaa
      661 ttagaaagaa tgaccgcgat ttccaagtag gagatatttt gattttacgc gaatggaacc
      721 atgaattttc aggctttcag atcgctgttg aagtagttta catgacggat tatgagcaaa
      781 aagacggatt tgtcgtctta gggattgtat agggggagaa caaatgacta gcacaataaa
      841 aatatctgaa aaagataaag tgttccagat tgcgacgaaa agtggatggg ctgtgaaggt
      901 ggggatgcaa gtgacgatag atgggataga ctttgcaatt tatccgttct atgcaaaaag
      961 caatgttttt atacaagtta gtgaagttga aagtggcgga gtattaatta attttccagt
     1021 cgattttata gacgtttttg ttttagacac tcgagataaa gcaatcgaat attataaaga
     1081 taatgtgatt cctttagttc agaaaaaaat cgaagtaaat ggattagatg aatttagaaa
     1141 agcaattaaa aacgcgaaaa attatatact tgaaaatttc ggagaacgac cacaaattaa
     1201 aaaatttgag gaggcaaacg aatgatgaac cgtgtagtgc ttgtaggacg attaacgaaa
     1261 gaccctgaat tacgttacac tccagctgga gtagctgttg cgacttttac gctagcagta
     1321 aatcgcccat ttaaaaatgc acaaggagaa caagaagccg atttcattaa ttgtgttgtt
     1381 tggcgtaaac cagcggaaaa cgcagctaat ttcttgaaaa aaggaagcat ggcaggcgtt
     1441 gatggacgtg ttcaaactcg taattatgag gacagcgacg gtaaacgcgt tttcgttact
     1501 gaggtagttg ctgaaacagt tcaattctta gagcctaaaa atatcaacgc agaaggcgct
     1561 acatcgaata attatcaaaa ccaagctaat tattcaaata acaataaaac aagctcatat
     1621 cgagcagata cgagtcagaa gagtgattca tttgcagacg aaggcaaggc gattgatatt
     1681 aatgaagatg atttgccatt ttgagcgaaa gggtgaataa aaaaatgaca gcagaaacag
     1741 cgctagaaaa tattaataat ctgagtaaaa gattagcgag catcagattt atggctaatg
     1801 cgattgcaga agtcacaaac taccaaatta gcgaaattga acaaatgggg gacgaagaaa
     1861 ttgaggcgaa atatacggcg tacgtcatta acgaagcaaa cgagtacgcg aaataaatac
     1921 aatgcgaaga aagttgttat tgacaatata aagttcgata gcaaagcgga agcagcatat
     1981 tatcagcaat tgaaactatt aaaaatgact ggtgaagtag ttagtttcga tttacagcca
     2041 gagtttgtgt tacaagaaag ctttcgaaaa aacggaaaac tgtatcgagc tattaaatat
     2101 aaagctgatt ttctcgtacg atacaatgat gggcatgagg agttaatcga cgtcaaaggc
     2161 atgttaacaa acgagtttat actcaaacga aaactatttg aaatgcgtta tatgcaatca
     2221 attaagtgtg tgaaattaaa aggcggggaa tttttggagg tgtgataaat ggcagtaatg
     2281 gagatgacaa agaacaaaac aaggcagcgg gaaattatta gttatatagc aaataacgat
     2341 gtagaactaa acgaattact aaagttgcaa aaagagttaa acaatctgat gaaagaaaat
     2401 acagaagaaa agcaaaaaac ttattggaca aaaacgtttg atcgcatcgt gaaaaagaaa
     2461 aaatgggcgg aaattacagt tcgtgaattc gctgatttac gtaacgcagg actaacatgt
     2521 tacgcaattg cagagcattt caaagtgtcg aagtcaacag ttttaaatta tacgcaaaga
     2581 aataaaaaag aatactatca aatttttgac atgaacgaat atcaacggaa taaggagata
     2641 tggaatgatt gataaagtag cgaaatttat aggagctttg actatttacg ctttatgggt
     2701 cctagtatta atttttgtac taggattagc agttaaaggg attctatggg cttggag
//
LOCUS       DASDYK010000200         2736 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.202, whole genome shotgun sequence.
ACCESSION   DASDYK010000200 DASDYK010000000
VERSION     DASDYK010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2736)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2736)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2736
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.202"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            54..1223
                     /locus_tag="U0308_002909"
     CDS             54..1223
                     /locus_tag="U0308_002909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HEM2317860.1"
                     /translation="MKEVVIIDAVRTPIGKFGGSLKDISAVDLGATALKGVLERANIA
                     PERVDQVIFGNVLQAGLGQNVARQIAIKAGIPYKVPGVTINEVCGSGLKSVMLGRQAI
                     QLGEADIVAVGGTENMSQAPLLLNPELAGEEIDPKKLRNSMLIDGLTDVYGEYHMGIT
                     AENVAEKFSVTREEQDEFAHNSQMKAANAQEKNLFEEEIIPVKLPDGSFFEADETIRA
                     NSTLEKLATLKSVFKEGGTVTAGNASGINDGASAIILMSKEKAVAENIPYIATIKVTS
                     EVGVDPALMGYAPYYAVNEALTKGGYSIDDIDLFHLNEAFASQSVAVARDLKIPEEKL
                     NIYGGAIALGHPIGASGARIIASLLNELKHENKHIGVASLCVGGGIGIAIILEKA"
     gene            1410..2732
                     /locus_tag="U0308_002910"
     CDS             1410..2732
                     /locus_tag="U0308_002910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2317861.1"
                     /translation="MKHTKKITFSFIIFMTILSITFNPFSAKAAPLMLNLPEPQVDQL
                     YIGDDYITGKLQQEVPMHYPGNAAYVLFNNKQYNITDYTVENDVNFRLKLPKTLEAGD
                     TLNYFTITGNVLDPVAYPGQESYKLAGPFTPIEKANIQVNYVDETNQTLATSDTLSGK
                     LGETYTTSPKAIDGYQVKETPTNATGTYTTNTETIQVNYVYEKTAVEGANVSVEYIDE
                     ATNESIAPTETLSGKIGATFQAEVKELDGYELSQVPSNQSGTYTDQPQSVIFKYKKIT
                     TPVEVAKDVTVTYKDTKGNQLADPVILKGDIGSTFETEAKSFKGYKLTKTPSNHIGSF
                     TSDSQEVDYVYSKDSSIITPPVDPVDPDKPIVINPVKPVNPATPTVPNKNIPKKKITK
                     TVNQTDKTTTASELPKTGDSENNLPLIIGVSLLISGVYIFTTRRKRVK"
BASE COUNT          988 a          507 c          505 g          736 t
ORIGIN      
        1 tttagctagt ttcatgatat aatacggata gattacattt aaaggagatt gctatgaaag
       61 aagtagttat aatagatgca gttagaacac caattggaaa atttggtggt agtttgaaag
      121 acatcagtgc agtagacctt ggcgctaccg ctctaaaagg tgttttagaa agagccaata
      181 ttgctccaga acgggtggat caagtgattt ttggtaatgt attacaagct ggacttggcc
      241 aaaatgtagc tagacaaatc gctattaaag caggaattcc ttataaagta cctggagtca
      301 caatcaatga agtttgtgga tctggcttaa aatcggttat gcttggtagg caagcaattc
      361 agctagggga ggctgacatc gtagccgttg gtgggaccga aaatatgtcc caagcaccac
      421 ttttacttaa tcccgagcta gctggcgaag aaatcgatcc aaaaaaacta agaaatagca
      481 tgttaattga tggtttaaca gatgtttacg gcgagtatca catgggaatt actgcagaaa
      541 atgttgcaga gaaattctcc gtaaccagag aagaacaaga tgaatttgcc cataactcac
      601 aaatgaaggc cgcgaatgca caagaaaaaa acctttttga agaggaaatt attcctgtaa
      661 agcttccaga cggttcattt tttgaagccg atgaaacgat tcgcgcgaat tcaactctag
      721 aaaaattagc tactttgaaa agcgtattca aagaaggtgg aacggttaca gccggcaatg
      781 cttccggtat caatgatgga gcttccgcaa ttattttaat gtcgaaagaa aaggcagtcg
      841 cggaaaacat tccttatatc gcaacaatca aagtaacctc tgaagttggt gtcgatccag
      901 cacttatggg ttacgcgcca tactatgcag taaatgaagc tttaactaaa ggtggatatt
      961 ctatcgatga cattgattta ttccatttaa acgaagcttt tgcatcgcag tcagttgcag
     1021 tggctcgtga tttaaaaatt ccagaagaga aacttaatat ttacggtgga gcaattgcac
     1081 taggccatcc aattggagct tctggtgcac gcattattgc ctcattgtta aatgagttaa
     1141 aacatgaaaa taagcacatc ggtgtcgctt ccttgtgtgt tggtggtggt attggtattg
     1201 caattatcct tgaaaaagct tgatagtagt acatttaatg ttagtaaaaa gctaaaatca
     1261 gctaatagtt gattttagct ttttatgatt tcgtttttgt cttttttgtg aacaaaccgc
     1321 caatttgttt tgtgaaactt cttacaaaaa caagtatttg tacggttttg gtgctagaat
     1381 gtaattattc taacaagcag gaggacatta tgaagcacac taaaaaaatt acatttagct
     1441 ttattatatt tatgacaatt ctaagtatca cttttaatcc tttttcagcc aaagcagcac
     1501 ctttaatgct taatttacct gaaccacaag tggatcaact ctatattgga gatgactata
     1561 ttaccggaaa attacaacaa gaagtaccta tgcattatcc cggcaatgca gcctatgtgc
     1621 tttttaacaa taaacaatat aatatcaccg actatacggt tgaaaatgac gtgaatttcc
     1681 gtctaaaatt acctaaaacg ctggaagctg gagacacact aaactatttt accataactg
     1741 gtaacgtact tgatccagtt gcttatcctg gacaagaatc atacaaatta gccggacctt
     1801 tcactccaat tgaaaaggca aatatacaag ttaattatgt tgacgaaaca aaccaaacac
     1861 ttgcaacgtc cgacacatta tccggaaaac tcggtgaaac ttatacaaca tctccaaaag
     1921 caattgatgg ctaccaagta aaagaaacac caacaaacgc aacaggcacc tacacaacaa
     1981 acactgaaac aatacaagtg aattacgtat atgaaaaaac agcagtagaa ggggcaaacg
     2041 tatctgtaga atatatagat gaagcaacta atgaatctat cgccccaacc gaaacacttt
     2101 ctggaaaaat aggcgcgact ttccaagcag aagtaaaaga actcgacggc tacgaattaa
     2161 gccaagtgcc atcaaatcaa tcaggaacat acaccgacca accacaatcc gttattttca
     2221 aatataaaaa aataacaacg cctgttgaag tcgcaaaaga tgtaactgta acgtataaag
     2281 acactaaagg aaatcaactt gctgatccag ttattttaaa aggtgacatc ggatcaactt
     2341 tcgaaacaga agcaaaatct tttaaaggct ataaattaac taaaacacca agtaaccaca
     2401 ttggctcatt tacgagtgat agtcaagaag ttgattatgt atatagtaaa gatagctcga
     2461 ttatcacacc gccagttgac ccagttgacc cagataaacc aattgtaatt aatcctgtaa
     2521 aaccagtcaa tccagccaca ccaactgtac caaacaaaaa cattccaaaa aagaaaatca
     2581 ctaaaactgt aaaccaaaca gataaaacaa ctacagcttc cgagttacca aaaacaggtg
     2641 acagcgaaaa taatttacca ttaattatcg gtgttagttt gttaatcagc ggagtttata
     2701 tcttcactac aagaagaaaa cgagtgaaat aagttt
//
LOCUS       DASDYK010000201         2685 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.203, whole genome shotgun sequence.
ACCESSION   DASDYK010000201 DASDYK010000000
VERSION     DASDYK010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2685
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.203"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(214..504)
                     /locus_tag="U0308_002911"
     CDS             complement(214..504)
                     /locus_tag="U0308_002911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317862.1"
                     /translation="MSKERCACCNCLTIDVRGEFEICPICFWEDEGYFVFDKEEIYSH
                     YQDIFSIEDLLNIRSSANNGLTLLDARQNFKLFGACELAMKKYVREPNAEEL"
     gene            complement(501..971)
                     /locus_tag="U0308_002912"
     CDS             complement(501..971)
                     /locus_tag="U0308_002912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2317863.1"
                     /translation="MEITLQQPTSADFSFIEWLWGDLATTEVLGGPFSFPEEMRMDWL
                     KSKSQASNAYFIIKKGIESVGEVSFRDFEKGTAHLNIKVAACYRGQRIAQKALQLFLD
                     FFQTDCGGIVMLDEVRRKNEAGIGFLVKAGFEVIEEKEWTMVLKWSAQAEGGFE"
     gene            complement(1091..2230)
                     /locus_tag="U0308_002913"
     CDS             complement(1091..2230)
                     /locus_tag="U0308_002913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014654245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 26/phosphotriesterase HocA family
                     protein"
                     /protein_id="HEM2317864.1"
                     /translation="MINNEIREVIGLHQINENDQKLTVENAEVIIRNHVLIKLILNQA
                     DCYKEIDYNLELTDTNELVGRKNAKPKALTTKTILKAKTKELRLKINKISHRIELKLG
                     VQHFENIYFEEGMLFTKENVQEKIAANYGSDWLSILDKAKLKVKTRQTIQQGSIFSYP
                     IGNEYGFGLVIGCFQAFRKQKIMPQDSSHYLRLMMGVPLVIRSFNYTSKQNTVDLSLL
                     KKQELLNPEFIMDDLVSRGDFPIIGRVDLEEADISFPMNFSFNGVSTTYAGYQAIGEP
                     DRDIIKKYEEEITVRFDWGFGSKTMPAKEFLKRSSGKESFLPYSGLGMTPIAGYSKKL
                     VSPKSIFSEEELKQIYAVLDINGEMSFDDFNENYNGLTAQNILSI"
     gene            complement(2255..2601)
                     /locus_tag="U0308_002914"
                     /pseudo
     CDS             complement(2255..2601)
                     /locus_tag="U0308_002914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464659.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
BASE COUNT          810 a          563 c          353 g          959 t
ORIGIN      
        1 ggcaattttt cttgtttcag gaaattattt tccctccttt tattcggaag ctaattccca
       61 ttcacccttg gtaatattgc tttcaccgta cttatcatac ccatttattt ttcattaaaa
      121 tatgtctaaa aaatgaacca atataagaaa tcagcttttt taactactaa aaaagtaagt
      181 taggctttta aatctaactt acttgctcat tttttataat tcctctgcat ttggctctct
      241 tacatatttt ttcattgcca actcacaagc accaaacagt ttgaaatttt gtcgtgcgtc
      301 taataacgtt aaaccattgt tagcactaga gcgaatattt aacaaatctt ctatcgagaa
      361 aatatcttga tagtgagaat aaatctcttc cttatcaaag acaaaataac cttcatcttc
      421 ccagaaacat atcggacaaa tctcaaactc gcctctaaca tcaattgtta aacagttaca
      481 acatgcacat ctttctttac tcattcaaaa cctccttctg cttgagcact ccatttgagc
      541 accatcgtcc attctttttc ttctataact tcgaaaccag ctttcacgag aaacccaatg
      601 cctgcttcat ttttccgtct aacttcatcc aacataacta ttccaccgca atcagtttga
      661 aaaaaatcca agaataattg caaagctttt tgagcgattc gctggccccg gtaacatgca
      721 gccactttaa tatttaaatg agctgtccct ttttcaaaat cacgaaagct aacttcacca
      781 acagattcta tacctttttt tataataaaa taagcattgc tcgcttgaga ttttgacttg
      841 agccagtcca ttcgcatttc ttcaggaaaa gaaaatggcc caccgagtac ttctgtcgtt
      901 gccaaatctc cccataacca ttcaatgaag gaaaagtcag ctgaggtagg ttgttgtaaa
      961 gtgatttcca tgaaattcct ccttgtttac ttggtagtta aaagttcact aatgaacttg
     1021 atgattgcat tttacaatgt tatcatttgg tgcaaattgg gaaagttttt aattagtacc
     1081 actaaagcca tcaaatcgat aaaatatttt gagcggtaag gccgttataa ttttcattaa
     1141 aatcatcaaa cgacatttcc ccgtttatat ctaaaaccgc ataaatttgc tttagttcct
     1201 cttctgaaaa gatggattta ggagaaacta actttttcga atatccagca attggggtca
     1261 ttcctaatcc agaataaggt agaaatgact ctttcccact acttctcttc aaaaattctt
     1321 tcgcaggcat cgttttgctt ccaaatcccc aatcaaatct aacggtaatt tcctcctcgt
     1381 actttttaat aatatcccta tctggttcac ctattgcttg ataaccggca tacgttgtag
     1441 acactccatt aaaagaaaaa ttcattggaa aggaaatatc cgcttcttcc aaatctaccc
     1501 taccaataat cggaaaatcc ccacgcgaca ctaaatcatc cataataaat tccggattta
     1561 agagctcctg ttttttcaaa agtgataaat caactgtatt ttgtttactt gtatagttaa
     1621 agctacgaat aacaagcgga actcccatca tcaatcggag gtaatgcgag ctatcttgag
     1681 gcattatttt ttgtttccga aacgcctgaa aacaaccaat cacaagccca aaaccatatt
     1741 catttccaat tggataagaa aaaatggaac cttgctgaat ggtttgtctc gttttcactt
     1801 tgagctttgc tttatctaat atgctcaacc aatcacttcc ataatttgca gcaatttttt
     1861 cttgtacatt ttctttcgtg aaaagcatcc cttcctcaaa atagatattt tcaaaatgct
     1921 gaacacctag ttttaactct attcgatgac tgattttatt tattttcaac cttaattctt
     1981 tggttttagc ttttaaaatt gtttttgtcg tcaatgcttt tggttttgca ttttttcggc
     2041 caactaattc atttgtatct gtaagctcta gattataatc gatttctttg tagcaatcag
     2101 cttgattaag aatcaatttt atcagcacat gatttctgat gattacttct gcattttcca
     2161 cagtcaattt ctgatcattt tcattaattt gatgtaatcc gatcacttct cgtatctcat
     2221 tattaatcat ctctactcgc ctttcctgtt gtatttataa cttctctcga tatccatcca
     2281 cttttttagc cacaaaggaa attgtttctg ccaaatcttt ctgttgctcg tacaagtttt
     2341 tcatatgatt atttaaaatt tctatccgat ttggaagtgt catgtctcct tgcttttgta
     2401 atgcagcaaa atttttaatg tttgttattg tcatccctgt ttgcttcatt ttagtaaaag
     2461 ctgtacccag caataatctt cttccgtata aacacgataa tttttttcat ttctagcagg
     2521 aattaataat tcttcttcct cgtaatatcg aagcgtatca atcgaaagcc ccgttttaat
     2581 ggcaaaatct ttaatataca tctagttcct ccttgctatc gggtatactc cataccttaa
     2641 gcttaacata gtcaaaggag gagaagaaat gtatttaaaa gaaaa
//
LOCUS       DASDYK010000202         2551 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.204, whole genome shotgun sequence.
ACCESSION   DASDYK010000202 DASDYK010000000
VERSION     DASDYK010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2551)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2551)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2551
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.204"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..668
                     /locus_tag="U0308_002915"
     CDS             <1..668
                     /locus_tag="U0308_002915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317865.1"
                     /translation="SKLEILDQQKAELESQLKQVENSTTYIEKQSELEMIEEKLRDEK
                     GSSINAVAEIQIKIDKLNAEASDLKADLAKFDSNQKQENRIQELEEEAAEKGAKYDEL
                     EMGLYLIERFNKAKCNLLEDKINSKFKYVSFKLFKTQINGGIDECCETIYNGVPYNSG
                     LNNAARINGGLDIINALTEHVQVLAPIFVDNRESVTELIDTESQLVSLIVSESDENLR
                     VEA"
     gene            669..1454
                     /gene="bet"
                     /locus_tag="U0308_002916"
     CDS             669..1454
                     /gene="bet"
                     /locus_tag="U0308_002916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage recombination protein Bet"
                     /protein_id="HEM2317866.1"
                     /translation="MMAKENYSDPNGKLLNSITTFEVNGEEVKLSGNIIRDYLVSGNA
                     EVTDQEIIMFLQLCKYQKLNPFLNEAYLVKFKNTKGPDKPAQIIVSKEAFMKRAETHE
                     QYDGFEAGVIVERGGEIIELEGAVSLASDKLLGGWAKVFRKDRNRPVSVRISEKEFNK
                     RQSTWNTMPLTMMRKTAVVNAMREAFPDNLGAMYTEEEQGSLQNTETSVQQEIKQNAN
                     AEVLDIPSQQNEVPDFKEVREPEHVEMPPIYDEQQSTPPARPY"
     gene            1414..2157
                     /locus_tag="U0308_002917"
     CDS             1414..2157
                     /locus_tag="U0308_002917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2317867.1"
                     /translation="MMSSNLHRLLDLINMEIKTIASGSTGNAYVISSGRSQLLIECGV
                     NFDKIRKALNFDLSAVEACLISHEHGDHVAGVKKMLRTSSIKIYASEGTLSALNVPDS
                     RQFILKEKNAQNIGEWIILPFQTEHDAKEPLGFMIQRNNERLLFITDSYFVRYKFKNI
                     NYLMIECNYSADILEENVINKVIHPVQKKRVLQSHFSLENVKEFLNANDLSQLREIHL
                     LHISSSNGDPNMFKNEIQALTGVPVYVLE"
     gene            2163..>2551
                     /locus_tag="U0308_002918"
     CDS             2163..>2551
                     /locus_tag="U0308_002918"
                     /inference="COORDINATES: protein motif:HMM:NF025107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2317868.1"
                     /translation="MENEIRVKGIFEQGYGIIAKALMRDKDLSIEAKSIYSYLASFAG
                     AGNTAFPSVELIIAELNISRDRFYKHRKQLVEKGFITVIQKKGDKGLQQRNIYQLNPI
                     LKPQSSFKDTDSPQSNYPESSFPQSDNT"
BASE COUNT          972 a          389 c          517 g          673 t
ORIGIN      
        1 aatcgaaact agaaatatta gatcaacaaa aagcagagtt agaatcgcaa ctgaaacaag
       61 ttgaaaactc tactacttac atcgagaaac aatctgaact ggaaatgatt gaagaaaaac
      121 tgcgtgatga aaaaggttct tctataaatg cagtagcaga gattcaaatc aaaattgata
      181 aattgaatgc tgaagcaagt gatttaaaag ctgatttagc aaaatttgat agcaatcaga
      241 aacaagaaaa tcgcattcag gaattagaag aggaagcagc agaaaaaggc gctaagtacg
      301 acgaattgga aatgggatta tatctcattg aacgatttaa taaagcaaaa tgtaatcttc
      361 ttgaagacaa gattaacagc aagttcaaat atgtttcatt caagttattt aaaacgcaaa
      421 ttaacggtgg gattgatgag tgctgtgaaa cgatttacaa cggtgttcct tacaattccg
      481 gattgaacaa tgccgctaga ataaacggtg gtttggacat tattaacgca ctaacagagc
      541 atgttcaagt gcttgctcca atttttgtag ataatagaga gtcggtaact gaactaattg
      601 atacagaatc acagctagtt agcttaatcg tttctgagtc agatgaaaat ttgagagtgg
      661 aggcataaat gatggcaaaa gagaattata gcgacccaaa cggaaaattg ctcaatagta
      721 taacgacatt tgaagtgaat ggagaagaag taaagctatc tggcaatatt attagggatt
      781 atttagtaag tggaaatgca gaggttacag accaggaaat aatcatgttt ttgcagttat
      841 gtaaatatca aaaattaaat ccatttctta acgaagccta cctagttaaa tttaaaaata
      901 caaaaggtcc agataaaccc gcacaaataa ttgtttctaa agaagcattt atgaaacgtg
      961 ctgaaacaca tgaacaatat gacggattcg aagcaggtgt aattgtggaa aggggcggtg
     1021 aaattattga attagaaggc gcagtttctc tagcctcaga caaattatta gggggctggg
     1081 caaaggtttt tagaaaagat agaaataggc cagttagtgt aagaatcagt gaaaaagagt
     1141 ttaataaaag acaatcaact tggaatacca tgcctctaac aatgatgcgt aagaccgcag
     1201 ttgttaatgc gatgagagaa gcttttccgg ataacttagg tgccatgtat acagaggaag
     1261 aacaaggttc gctacaaaac actgaaacaa gtgttcaaca agaaattaaa caaaatgcta
     1321 atgcagaagt gttagatatt ccttcacagc aaaatgaagt gccagatttt aaagaagtaa
     1381 gagagcccga gcatgtagaa atgccaccga tatatgatga gcagcaatct acaccgcctg
     1441 ctagacctta ttaatatgga aattaagaca atagcaagtg gaagtacagg gaacgcctac
     1501 gttattagta gcgggcgctc ccaactgcta attgaatgtg gtgtaaactt cgacaaaata
     1561 agaaaagcac taaattttga tttatcggca gtggaagcct gtttaattag ccacgagcat
     1621 ggagatcacg tcgctggcgt caaaaagatg ttacgcacat caagcattaa gatatacgca
     1681 tcagaaggca ccttgtctgc tttaaatgtt ccggacagtc gacaattcat tttaaaagaa
     1741 aaaaacgctc aaaacatcgg agaatggatt attttaccgt ttcaaactga acatgatgca
     1801 aaagagccac ttggttttat gattcaacgc aataatgaaa gactactttt cattacagat
     1861 agttattttg taagatacaa attcaaaaac atcaactatt taatgattga gtgtaactat
     1921 tcagcagata ttttagaaga aaatgtaata aataaagtta tacatccagt tcaaaaaaag
     1981 cgtgttttac aatcgcattt cagcttagaa aatgtaaaag agtttttgaa cgcaaatgac
     2041 ttatcgcaac taagagaaat tcacttgcta cacatttctt ctagcaacgg agatcccaat
     2101 atgtttaaaa atgaaattca agcattaact ggtgtgccag tttatgtact ggagtgaaaa
     2161 aaatggaaaa cgaaattcgt gtgaaaggaa tatttgaaca aggatacgga ataatagcaa
     2221 aagctttgat gcgagataaa gacttgagta ttgaagctaa gagcatttat tcctatcttg
     2281 caagttttgc gggtgcagga aatacggcat ttccttctgt cgaacttatt attgcagaat
     2341 taaatattag tagagataga ttttataagc accggaaaca actagttgag aaaggattta
     2401 tcactgtaat tcaaaaaaag ggtgataaag gtctacaaca aagaaatata tatcaactaa
     2461 accccatttt aaagccgcag tcgagtttta aggacacgga tagtccgcag tcgaattatc
     2521 cggagtcgag ttttccgcag tcggataaca c
//
LOCUS       DASDYK010000203         2462 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.205, whole genome shotgun sequence.
ACCESSION   DASDYK010000203 DASDYK010000000
VERSION     DASDYK010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.205"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            276..1943
                     /locus_tag="U0308_002919"
     CDS             276..1943
                     /locus_tag="U0308_002919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primase C-terminal domain-containing protein"
                     /protein_id="HEM2317869.1"
                     /translation="MNKSLSEKDTYLYSAVINTTVKESLTAFRKRKSNGVLAIQDYYS
                     KLESSNSNRKGVQFVVRQKEDLQREKGACGYIVTSQEALLDAVDQISHWTPNTYRWGT
                     YSDNRRKYIKGHSEENLQQINTYVIDIDTLDVDVPKMIMASIKLLNQTPTYILQTQKG
                     FQMYFVLESAVFVSNANNFKSLRVAKRIATNLKHAFAEHLPAVDQGCNDFGFFRAPNT
                     NNVVFEKLNSQLVFKDLIAWSKQYSIDNNRQGLKLVKNSGLEKTYDATTQKWYRDLAN
                     LTNVKGHKNQYGRNNTIFTLALACYSAGKSYEETYNELDVFNSNLKHSVSNRELEKCI
                     ANAYSGKYKGAALEKVIAILQTYANSDYEVSYSKTFIYDETGRVKPQFYRKHKKERAE
                     RKYSHMQEWETDLEKYIEKTMLNGHVFIAKSQREIAEETKIPYATLKRLLKQSKRIIS
                     RVEGSGRAAKTLLSTVAIVVEAAIRHAMTKKQDKSEKYIRFLATFTEAANYVMHNFKN
                     KYHSTSTGSAILEALPSGHSPGQQIFLLLDKVYKTGQVERLKRLEGS"
     gene            complement(2079..>2462)
                     /locus_tag="U0308_002920"
     CDS             complement(2079..>2462)
                     /locus_tag="U0308_002920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM2317870.1"
                     /translation="FENQVAITISQRLLKQTEKYLHMDNIKRIQANTLMNISTLYLNQ
                     KDYKNALEYIDQTVHTAKKYEYFTLWLFAQGTQGILYCLEHKPEVGIPLIKKSIHLLK
                     TLDQLDIAKALENDVSNFLTLDINN"
BASE COUNT          882 a          374 c          449 g          757 t
ORIGIN      
        1 tataaattga accacattcg accaaaaatg taattcctag caactatccc aaaagtgaaa
       61 tataattttt tcctcaaaaa aattatatca catttaggtc tatttgacaa tggttttaaa
      121 cactgataca aagccatttt cgaacttttt tctgctagga tgtcgaaatt tatcttccta
      181 tgcggaaatt tatgatgtct tttaaggaca aataacttcg tgaggaagtt acttgtcctt
      241 tttttgttta gaaaaaacga aaggagcctc cagacatgaa taaaagcttg agtgaaaaag
      301 atacatattt gtattcagct gttattaaca caacagttaa agaaagccta acagcattcc
      361 ggaaacgaaa aagtaatggt gtattagcca ttcaagatta ctactctaaa ttagaatcta
      421 gtaatagcaa tcgcaaagga gtgcaatttg ttgttcgaca aaaggaagac ttgcagcgtg
      481 aaaaaggtgc atgcggatat attgtgacga gtcaagaagc gcttctcgat gcagtagacc
      541 aaattagtca ttggacaccg aacacatatc gttggggtac ctattcggat aatcgacgta
      601 aatacattaa agggcattct gaagagaact tgcaacaaat taatacatac gtaattgata
      661 ttgacacatt agatgttgat gtacccaaga tgattatggc atctataaaa cttttaaatc
      721 aaacgccaac atacatattg caaacacaaa aaggctttca aatgtatttt gtgctagaaa
      781 gcgctgtgtt cgtgagcaat gcaaataatt tcaaaagttt acgtgttgca aaacgtattg
      841 caacgaactt aaaacatgct tttgcggaac atttgccagc agttgaccag ggttgtaacg
      901 actttggctt ctttagagcg ccaaatacaa acaatgtagt atttgaaaaa ctaaacagtc
      961 aattggtttt caaagattta attgcctggt ctaaacaata ctctatcgat aacaatagac
     1021 aaggccttaa attagttaaa aattccggat tagagaagac ttatgatgct acaactcaaa
     1081 aatggtatcg tgatttagct aatctgacga atgttaaagg gcataagaat caatatggac
     1141 gtaataatac tatttttacg ttggcactag cttgctattc agcaggcaaa agttatgaag
     1201 aaacatacaa tgaattagat gtttttaatt ctaatttaaa gcacagtgta agtaatcgag
     1261 agttagaaaa atgtatagca aatgcttatt ccggaaaata caaaggagca gcattagaaa
     1321 aagtaatagc tattttgcaa acatatgcta attcagacta tgaagttagc tattctaaga
     1381 catttatcta tgatgaaacg ggtagagtta aacctcaatt ttacagaaag cataagaaag
     1441 aacgagcaga acgaaaatat tcacatatgc aagaatggga aactgattta gaaaaatata
     1501 ttgagaagac gatgttaaat ggccatgtgt tcattgcgaa atctcaaaga gaaattgccg
     1561 aagaaacaaa aatcccatat gcaacattaa aaagattgct gaagcaatcc aagcgaatca
     1621 tttcgcgagt tgaaggaagt ggacgtgcgg ccaaaacatt attatctact gtcgcaatcg
     1681 tagtagaagc agcaataaga catgcaatga ctaaaaagca agataaaagt gaaaaatata
     1741 tccgtttttt agcaactttt acggaagcgg caaactatgt aatgcataat tttaagaata
     1801 agtatcattc tacaagcaca ggaagcgcta ttttggaggc attaccatcg ggacatagtc
     1861 caggccaaca aatatttttg ctcctcgata aagtgtataa aacaggacaa gtagagcgtt
     1921 tgaaaagact agagggctct tagcaattaa tgagctcaat tgccttttta cttaattcta
     1981 gttacgttag cttttccacc aggcattaat attaattctt tagtttttga tagatggaaa
     2041 actaaaaagg cctaagtgtt tctaaggcct ttaatgattt aattattgat atctagagtt
     2101 aagaaattac tgacatcatt ttctaatgct ttagcaatat ctaattgatc taatgttttt
     2161 aggagatgta tagatttttt aattagagga ataccgactt ctggtttgtg ctcaagacaa
     2221 tataggatgc cttgagttcc ttgggcgaat agccatagtg taaagtattc gtacttttta
     2281 gcggtgtgta cagtttgatc gatgtattct agcgcatttt tataatcttt ttggtttaaa
     2341 tatagagtgc ttatattcat caatgtatta gcttgaattc gtttaatatt atccatgtgt
     2401 agatactttt ctgtttgttt taataagcgt tgacttatag taattgctac ttgattttca
     2461 aa
//
LOCUS       DASDYK010000204         2451 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.206, whole genome shotgun sequence.
ACCESSION   DASDYK010000204 DASDYK010000000
VERSION     DASDYK010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2451)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2451)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2451
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.206"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            39..503
                     /locus_tag="U0308_002921"
     CDS             39..503
                     /locus_tag="U0308_002921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317871.1"
                     /translation="MDNCLAQLQMYDYLLKKYRNKEVFPDTRMIVEIDGKLWTGDFLQ
                     LDDCHIIEIDWEDTRFTRIERTKDAINDEFNEKVTNSNVNVSENRIDSKIGSLKNIEI
                     LYQEIGNFVRQVESSTTTLKPLLYNAYCLDTRVKLPFLDISKKEITLVSLTN"
     gene            complement(542..1003)
                     /locus_tag="U0308_002922"
     CDS             complement(542..1003)
                     /locus_tag="U0308_002922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM2317872.1"
                     /translation="MKHVRTAAIITHQNKILLHSNQEEDYWTLPGGAVENESTKEGLK
                     REMKEELGEDVAILELSIIAENRFLYRGEEIDSIEFYYAVKLLPESSLLNQPTFTKIE
                     EFGQYGEEAYKLHFKWFDIDKLKNITILPTFLETELANLSSKNIIHLEQTT"
     gene            1121..>2451
                     /gene="treP"
                     /locus_tag="U0308_002923"
     CDS             1121..>2451
                     /gene="treP"
                     /locus_tag="U0308_002923"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system trehalose-specific EIIBC component"
                     /protein_id="HEM2317873.1"
                     /translation="MVDYTKDASALLELIGGKENISSVTHCATRMRFVLQNPDNADVE
                     AIEDIPAVKGTFTQAGQFQVIIGNDVAIFYNEFSKISGVEGVNKEDAKVDAKKNMSIL
                     QRLLAGLAEIFTPLIPAIVVGGLILGFRNVIGDIKFLEDGTKTIVDVYPFWAGVYSFL
                     WLIGEAVFHFLPVGITWSIAKKMGTTQILGIVLGLTLVSPQLLNAYSVVETKAGDIPV
                     WDFGFAQVQMIGYQAQVIPAIMAGFLLAYLEIWLRKFIPNAISMIFVPFFALVPTVLA
                     AHVILGPIGWKIGDAISNVVYAGLTGGLSWLFAALFGFLYAPLVVTGLHHMTNAIDLQ
                     LMSQFGGTNLWPMIALSNIAQGSAVLAIIFLHRGNEKEEQVSIPATISCYLGVTEPAM
                     FGINLKYLYPFVAAMIGSAIAAVVSVSSGVMANSIGVGGLPGILSINPKYYA"
BASE COUNT          709 a          438 c          475 g          829 t
ORIGIN      
        1 acaatatgtt ataatagtcc cataaggaga tgacacacat ggataactgt ttagcgcaat
       61 tacaaatgta tgattattta ctcaaaaaat accgtaacaa agaggttttc cctgatacga
      121 gaatgattgt cgagatcgac ggcaaacttt ggactggtga ttttcttcaa ctggacgatt
      181 gccatatcat cgaaattgat tgggaagata ctcggttcac gcgtatcgaa cgtacgaaag
      241 atgctatcaa tgatgaattt aacgaaaaag ttacgaactc taatgtaaac gtaagtgaaa
      301 atcgtatcga ttccaaaatt ggtagtttaa aaaacattga aatattgtat caagaaattg
      361 gcaattttgt tcgccaagta gaaagttcta ctacaacatt aaaaccgtta ctctataacg
      421 cttattgttt agatacacgg gttaaattac cattcttaga tatcagtaaa aaagagatta
      481 ccttagtatc tttaactaat taaataaaat cccgcgaaac gtaaaaattt cgcgggattt
      541 tttatgttgt ctgttccaaa tgtataatat ttttacttga aagatttgct agctctgttt
      601 cgagaaatgt tggtaaaatg gtgatatttt tcaacttgtc tatatcgaac catttaaaat
      661 gcagtttata tgcctcttcc ccgtattgac caaattcttc tatttttgta aatgtaggtt
      721 gattaagtaa actgctctct ggtaacagtt taaccgcata ataaaactca atactatcta
      781 tttcttcgcc gcgatataaa aagcgatttt ccgcaataat gctcaattct aaaatagcca
      841 catcttcccc gagttcttct ttcatttcac gttttaatcc ttcttttgtt gattcatttt
      901 ccactgcacc gcccggaagt gtccagtaat cttcttcttg gtttgagtgg agcaaaattt
      961 tgttttgatg cgtgataatt gctgcagttc taacgtgttt catggccact cctccttctt
     1021 ttttatttta gcacaaataa agtggttgcg ctttcaaatt atttatagta tagtaatggc
     1081 gaacaacttg tatatacaag ttaaaaaagg aggaagtttt atggttgact atacaaaaga
     1141 tgcaagcgct cttttagagt taattggtgg caaagaaaat atatcatctg tcacacattg
     1201 tgctacgaga atgcgttttg ttttgcaaaa tccagataat gccgatgttg aagccatcga
     1261 agacattcca gcagtaaaag ggacatttac acaagctggt caatttcaag taattatagg
     1321 taatgatgta gctatttttt ataatgaatt ttcaaaaatt agtggtgtgg aaggtgtcaa
     1381 taaagaagat gccaaagtag atgcgaagaa aaatatgagt attcttcagc gtttacttgc
     1441 tggtttagct gaaatattca ctccattaat tccagcaatt gttgttgggg gtcttattct
     1501 cggtttccgt aacgtaattg gagatattaa gtttttagaa gacggcacga aaacgattgt
     1561 ggatgtttat ccattttggg ctggtgttta tagtttctta tggcttatcg gtgaggctgt
     1621 attccacttc ctaccagttg gaattacatg gtccatcgcg aaaaaaatgg gaaccacaca
     1681 aattcttggg attgtccttg gtttaacgct tgtttccccg caattactaa atgcttatag
     1741 cgttgttgaa acaaaagcag gcgatattcc agtttgggac tttggctttg ctcaagtaca
     1801 gatgattggg tatcaagcgc aagttattcc tgccattatg gccggattct tactagccta
     1861 tctcgaaatt tggttgcgta aatttattcc aaatgccatt tcgatgattt tcgttccatt
     1921 ctttgctctc gtacctactg ttcttgcagc tcatgttatt cttggaccaa ttggttggaa
     1981 aattggcgac gcgatttcga acgtcgttta tgctggcttg actggtggac taagttggtt
     2041 attcgccgca ctatttggct tcctatatgc cccgctcgtt gtcacgggac tgcatcatat
     2101 gaccaacgcc atcgacttac aattaatgag tcaatttggt ggaacgaatc tctggccgat
     2161 gattgcactt tctaacatcg cccaagggtc cgctgttcta gcaattattt tcttacatcg
     2221 tggcaatgaa aaagaagaac aagtttcaat tccagcaact atttcttgtt accttggtgt
     2281 tacggaacct gcgatgttcg ggattaattt aaaatactta tatccatttg tagctgccat
     2341 gataggttcg gcaattgcgg ctgtggtttc tgtatctagt ggtgttatgg ctaactcaat
     2401 tggtgtcgga ggactacctg gaatcttgtc cattaaccct aaatattacg c
//
LOCUS       DASDYK010000205         2444 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.207, whole genome shotgun sequence.
ACCESSION   DASDYK010000205 DASDYK010000000
VERSION     DASDYK010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.207"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(390..>2444)
                     /locus_tag="U0308_002924"
     CDS             complement(390..>2444)
                     /locus_tag="U0308_002924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapB repeat-containing protein"
                     /protein_id="HEM2317874.1"
                     /translation="VTEIESMHAFPKLQKLELGWNALTNVVMDQVTAEKFPLLRTMNV
                     RGNNLIKINIQDQPKLWTFECDTGSSSELTEVTLKNLPILIAVGNGSSAYQDDIVFSS
                     TPGLSKVILENLPSTSSEVKLDHCAIEELVINNLPKVSVVIISYNKITTLEGLENLSA
                     VSKIDAYENLVTEIENLHAFPKLQTLTVDNNHISVLPTSLKTENPVLTTLSAMNQTIT
                     LKQKVIVSDLVLDNEVKNFGQITTAKSISNKGTYQNNQIKWLFEDIKSVNAVDYQFSE
                     PVQEATIQGTFSGKVTQPIKASKVPVISADAEMNYPKNETVSEAAFFKDISASVTDDA
                     TLTSDFESVVDFAKAGTYEVTLNAVNEDGVKATSVTVLVHIAKSPAPVITADKEITYT
                     KNAEVSITEYLAAIHAKTNDGSPIESDFATAVNWGTAGDYTVTLRSTNEDGVEAIPVE
                     VTVHIAKSPAPVITADKEITYAKNAEVSITEFLAAIHAKTSDGSPIESDFATAVIWST
                     AGDYTVTLKSTNEDGVEAIPVEVKVHIVEPLAPTISNVTFDVDDVQTTESLEAGELIS
                     EPLSPTKEGYTFIGWYDSKTGGNKWDFTTDKMPAYNIILYAQFSKDTNKAEAAGGDKP
                     STPSSIKVSPTGQSESGNLENRSNIKLPATGDDNATVLLVGFGLLMLGLFIRLTQKKR
                     AK"
BASE COUNT          651 a          499 c          418 g          876 t
ORIGIN      
        1 actttccctc tattctatct tttaatttat tttgaataaa attgacacta attaattata
       61 agatgttaga aatagttaga tagttcgagt cagtactaaa tcgtccggaa aatgtgtcta
      121 tttttgggtt tcacttatta aatcgcagag gaagttctat tattagacta tccttcgtct
      181 ttgagggaat aataggcaaa aaaaactatc accccttttc ataaagttaa aagttgtttt
      241 gggacatgtt actcgttttt tctgctatct tttagtactc cagtatcaaa aaaagaggag
      301 acagctctct gtctcctctc cttgtgagtt gcaactattt atctcctaga agcaaccaat
      361 tacactattt tttaaatttc tatgagcttt tatttagcac gctttttttg agtaaggcga
      421 atgaaaagcc ccaacattag taatccaaag cccactaata aaacagttgc attatcatcg
      481 cctgtagctg gtaatttaat attagatcta ttttccaagt ttccactctc ggactgacct
      541 gttggactta cttttataga agagggtgtt gagggcttat ctccaccggc cgcttctgct
      601 ttatttgtat ctttactaaa ctgagcataa agaataatat tatatgctgg cattttatct
      661 gttgtaaaat cccatttatt accaccagtt ttcgagtcat accaaccaat aaaagtatag
      721 ccttcttttg ttgggctcaa tggttcagaa attagctctc cagcttcaag agattctgtc
      781 gtttgtacat catccacatc aaatgtcaca ttcgaaatcg ttggtgctag tggctctacg
      841 atatgcacct ttacttctac agggattgct tctactccat cttcatttgt agattttaac
      901 gttacggtat aatctcctgc agtgctccat attacagccg tagcgaaatc actttcaatt
      961 ggtgaaccat cactcgtttt agcatgaatc gctgcaagaa attccgtgat gctgacttcc
     1021 gcgtttttag cgtacgtaat ttctttatct gcggtaatta ctggcgctgg cgacttggcg
     1081 atgtgcacag ttacttctac agggattgct tcaactccat cttcatttgt agaccttagc
     1141 gttacggtat aatctcctgc agtgccccaa tttacagccg tagcgaaatc actttcaatt
     1201 ggtgaaccat cattcgtttt agcatgaatc gctgcaagat attccgtgat gctgacttcc
     1261 gcgtttttag tgtatgtgat ttctttatct gcggtaatta ctggcgctgg cgacttagcg
     1321 atatgcacta atacagtcac cgaagtcgct tttactccat cctcattcac tgcatttaat
     1381 gtcacttcat acgttcccgc ttttgcaaag tccacaacac tttcaaaatc agaagttagt
     1441 gttgcatcat ccgttacgct tgcagaaata tctttgaaaa aggcagcttc tgataccgtt
     1501 tcgtttttcg ggtaattcat ctctgcatct gcgctaataa ctggtacttt agatgctttg
     1561 attggttgtg tcactttccc cgaaaaagtt ccttgaatag ttgcctcttg aacaggttca
     1621 ctaaattgat aatcaacggc attcacgctt tttatatctt caaaaagcca cttgatttgg
     1681 ttattttgat aggttccctt attagagatg gatttggcag tggttatttg accgaaattc
     1741 ttcacttcat tatcaagaac taggtctgac acgataactt tttgctttag agtgattgtt
     1801 tgattcatcg cacttagcgt tgttaatacg ggattttccg ttttcaaact tgttggcaat
     1861 acactgatat ggttattgtc tacggtgagt gtctgtaatt tagggaacgc atgtaggttc
     1921 tctatttcag tcactaaatt ctcgtacgcg tcaattttgc ttactgcgga taaattttca
     1981 agtccttcta gtgtagtaat tttgttgtaa cttataatta ccactgatac ttttggcagg
     2041 ttattaatta ctaactcttc tatcgcgcaa tgatctaact ttacctcaga gctggttgat
     2101 ggtaaatttt ctaaaatcac cttacttaat cctggtgtac tcgaaaaaac aatatcatct
     2161 tgataagcgc tagagccatt acctacagct atcaaaattg gaagattttt taacgtaacc
     2221 tctgtcaact ctgaactact acctgtgtcg cactcaaagg tccataattt tggctggtct
     2281 tgaatattta tcttaattaa attattacca cgaacattca ttgttcttaa taacgggaat
     2341 ttttccgctg ttacttgatc cattaccaca ttagtaagtg cattccatcc cagctctaac
     2401 ttctgtaatt tagggaaggc atgcatactt tctatttcag tcac
//
LOCUS       DASDYK010000206         2417 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.208, whole genome shotgun sequence.
ACCESSION   DASDYK010000206 DASDYK010000000
VERSION     DASDYK010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.208"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..187
                     /locus_tag="U0308_002925"
     CDS             <1..187
                     /locus_tag="U0308_002925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317875.1"
                     /translation="IYAFSYTGERKWQIGERPVGDNDVYTLINVKEGILYATDFSGRK
                     YKVCEKNGIPEKMEIVK"
     gene            313..654
                     /locus_tag="U0308_002926"
     CDS             313..654
                     /locus_tag="U0308_002926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317876.1"
                     /translation="MKKLQWLTNRLFATSILLITTLFIIPPTFAIADGSKVSFYEYIY
                     GAPFRWLTVISTTDKKGAFTEMFFSGNEGITIQWPNLMINFLLIFLAITIIFSLAKKL
                     YDKKNVKKDNP"
     gene            complement(721..1089)
                     /locus_tag="U0308_002927"
     CDS             complement(721..1089)
                     /locus_tag="U0308_002927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2317877.1"
                     /translation="MAFSIGEFSELVGIPSSTLRFYEKEGLITPDRDKNNLRIYSEED
                     ANWLKFLLHLKGAGLSVEELKQYTIWRAAGDSTISERLNMLKKKKVILEQEIEDLQKN
                     LDTVVRKIGIYEEKVKTRRV"
     gene            complement(1145..2128)
                     /locus_tag="U0308_002928"
     CDS             complement(1145..2128)
                     /locus_tag="U0308_002928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2317878.1"
                     /translation="MKKRQLGNTGLVTSELGFGCMGLNYHWGPAKDRKEMIEVVRTAM
                     DTGITMFDTAEVYGPYTNEELVGEALVGKRNHVQIATKGGFKINGLNNEVDSRPESIK
                     AAVEGSLKRLKTDYIDLYYIHRIDPSIPIEEVAGTIQNLKQEGKILHWGLFEASAKTI
                     RRAHKVEPLAAVENEYSIWWREAEKEIFPVLEELGIGLVAYSPLGRGYLTGKLDINAN
                     FNENDNRGGLPRFQKEAMEANQVLLDFMKEIADEQNVTTAQLAIAWILDQKPWIVPIP
                     GTTKQSRIKENIASTDIRFDDGARQKIADALSQIEIVGDRYSAAENKRIGK"
BASE COUNT          708 a          467 c          426 g          816 t
ORIGIN      
        1 tatttatgct ttttcttata cgggtgaacg gaaatggcaa ataggagaga gacccgttgg
       61 agataatgat gtttatactt tgattaatgt aaaagaagga atactttacg ctacagattt
      121 tagcggaaga aaatataaag tttgtgaaaa aaatggaatt cctgaaaaaa tggaaattgt
      181 aaaataaaaa atacatttta ctgtctcgtt cagaaccctt gcaacccata tttaaaaagg
      241 gcctaaatgt tttagcaatg tttttataaa atcccaaatt ggaaaaccaa ccttcaccca
      301 aaaggagcta acatgaaaaa actacaatgg ctaactaacc gattatttgc aacctctatc
      361 ctcctaatca ccacgttatt tatcataccc ccaacatttg cgatagctga tggaagtaaa
      421 gtgagttttt atgaatacat atatggagca ccttttagat ggctaactgt aattagtacg
      481 acagataaga aaggtgcatt tacggagatg tttttctcgg gaaacgaggg tataactatc
      541 caatggccca atctaatgat aaactttctc ttaattttcc ttgcaataac tattatcttt
      601 tccctagcaa aaaagcttta cgataaaaag aacgtcaaaa aagacaaccc ataacaggtt
      661 gtctttttct atatgctgtt gtaaatggtc tcttactgta cacgagaaaa attcacctag
      721 ctaaactcgt ctagtcttaa ccttctcttc ataaatccca atcttcctaa ccactgtatc
      781 caaattcttc tgcaagtctt caatctcttg ctccaaaata acctttttct tttttaacat
      841 atttaatcgt tcggaaatag tgctgtctcc tgctgcgcgc caaattgtgt actgctttaa
      901 ttcttctacc gataacccgg cgccttttaa gtgcagtaaa aattttagcc aattggcgtc
      961 ttcttcgctg tatatgcgca aattattctt gtcgcggtca ggggttatta agccttcttt
     1021 ttcgtagaat ctaagggtgc tactgggaat gcctactagt tcggaaaatt caccgataga
     1081 aaaagccatt taatcacctc atctgtgtgt ttttcataag gataccattt tgaataggaa
     1141 atgcctactt tccgatgcgt ttattttcag ctgctgagta tctatcacca acaatttcaa
     1201 tctgcgataa agcatcagct attttttgtc gtgctccgtc atcaaaacga atgtccgtgg
     1261 aggcgatatt ttctttaatt ctgctttgtt ttgttgttcc gggaattggc acgatccaag
     1321 gtttttggtc aagtatccaa gcgatggcga gttgtgccgt tgtgacattt tgctcgtcgg
     1381 ctatttcttt cataaaatcg agtagtactt ggttggcttc catggcttct ttttggaatc
     1441 ttggtaagcc accgcggttg tcgttttcat tgaagttagc atttatatcc aatttgccag
     1501 ttaaataacc gcgacctagt gggctgtatg cgacaagccc gatgccaagt tcttctaaaa
     1561 ccggaaatat ttctttttca gcttctcgcc accagatgga atactcattt tcaacagcag
     1621 ctagtggctc tactttatga gcacggcgta ttgtctttgc gctggcttcg aaaagtcccc
     1681 agtgtagaat ttttccttct tgttttaaat tctgaatggt tccggcaacc tcttcaattg
     1741 ggatagaggg gtcaattcta tgaatgtaat ataaatcaat gtaatccgtt tttagccgtt
     1801 tgagagagcc ttcaaccgcg gccttgatgc tttctggacg gctatcgact tcgttattta
     1861 aaccattaat tttaaaacca ccttttgttg caatttgaac atggtttctt ttgccaacta
     1921 aagcttctcc gacaagttct tcattagtat aaggtccgta cacttcagca gtatcgaaca
     1981 tcgtaatccc tgtatccatt gcagtgcgta cgacttcaat catttctttt ctatctttcg
     2041 caggtcccca gtgataattg agtcccatac agccgaatcc aagctctgaa gttactaaac
     2101 cagtgtttcc taattgtctc tttttcataa aaatatgctc cttttaaacc aaatttttaa
     2161 attagaaata tcaggatgtt gtatttagtt tatcagttga agtgaacttt aagtcaagcg
     2221 taactaattt atttttaaga gcatgagata gtttaacaaa agcgatgatt aattttattt
     2281 tattgatggg ggcttattct ttgttcttgg aaggaaaaat tgcataaaag ctgtcttaaa
     2341 taagcgctag gaacgatttt agtagtttta atagtactaa tacatcaaga aatgttacga
     2401 aaaaatgtcg acaaata
//
LOCUS       DASDYK010000207         2358 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.209, whole genome shotgun sequence.
ACCESSION   DASDYK010000207 DASDYK010000000
VERSION     DASDYK010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2358
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.209"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            1..348
                     /locus_tag="U0308_002929"
     CDS             1..348
                     /locus_tag="U0308_002929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="HEM2317879.1"
                     /translation="MKEGKELITARNKIEKDLKQLLKDKNLTSPIYEDRVNAYLYYWD
                     MEQNLLRDINERGFYVEYDNGGGQKGTRKNDSALLLQKYTKQAMDILQFLSLKPPSES
                     VKNIGSEPHDPAL"
     gene            332..1984
                     /locus_tag="U0308_002930"
     CDS             332..1984
                     /locus_tag="U0308_002930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_038330181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HEM2317880.1"
                     /translation="MTQLSNVYKWHPAISEWMRMVENDEVENCKEQKLLMKYVRGRLE
                     QKNVIIEHNILDTAIATAERYFYKLFPFQKFIYAFVFAVFEIDEDGDKQLMFNDYFIY
                     AGRGFGKNGLLSCMIFECTTKNHGVDHYNIDIVATSEDQAKTSFEDIYNMLEENKDTM
                     KNVYRWNLVAIQHRKNGSTIKYKTSNARTKDGSRPGAVAFDEEHAYEDYSNYAVHTSG
                     LGKKERSRRFHLTTDGYVRGSVLDDRKVLAQQVLNGEKPNSKMFPFICKLDSPDEVQN
                     KTKWAKANPMILYYKPLRIEIDQHWDDAQSSSEIMVEFMTKRMNCPTQDPTTVAVKWD
                     DIKATNQPMPSLKMAPAIGGIDFADVRDFCAVGLLFKKEGKYIFKHHTFICAESLKIT
                     KFKFPIHEAVEKGLATIIHDNYIDEDYPLQWFLEQAKEHRIINIATDSFRYKSLKEAF
                     TSAGAPLIQVRSGPYSHNRLSSMVDKLFASHKIIFGDDMLMRWYCNNVAIKFDARGEK
                     TYIKIEPKTRKTDGFFALLHTLMLDEELPETREIKLYDVTTY"
     gene            1998..>2358
                     /locus_tag="U0308_002931"
     CDS             1998..>2358
                     /locus_tag="U0308_002931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEM2317881.1"
                     /translation="MGFKSWVSGFFNEEQRTLNLTDTVWCSIPSEKLKELSIKKWAID
                     SCANKIANTLSCAEVLTYEKGEEVRKKNWYMFNVEANQNQNATEFWKKAIYKLVYDNE
                     ALIFMQDEYIYVADSFTK"
BASE COUNT          887 a          323 c          460 g          688 t
ORIGIN      
        1 ttgaaagaag gaaaagagtt aataactgca agaaataaaa ttgaaaaaga tttaaaacag
       61 ctattaaaag ataaaaatct aactagtcct atttatgaag atagagtaaa tgcttatctg
      121 tattattggg atatggaaca gaatctatta agagatatta atgagcgtgg tttttatgtt
      181 gaatatgaca atggtggtgg tcaaaaaggc acccgtaaaa atgatagtgc attattactt
      241 caaaaataca ctaaacaagc aatggatatt ttacaatttc tatctctaaa accaccgtct
      301 gaatcagtaa agaatattgg aagtgaacct catgacccag ctctctaatg tatataaatg
      361 gcatccagca atttcagaat ggatgcgtat ggttgaaaat gatgaagtag aaaactgtaa
      421 agaacaaaaa ttattaatga aatatgtcag aggtaggtta gaacaaaaaa atgtaatcat
      481 agaacataat attttagata ccgctattgc tacggcagag cggtattttt ataaactttt
      541 tccgttccaa aaattcatat atgcatttgt atttgctgta tttgaaatag atgaagatgg
      601 cgataagcaa ttaatgttta acgattattt tatttatgct ggtagaggtt tcggtaaaaa
      661 tggtttatta agttgcatga tttttgaatg tacaactaaa aatcatggag tggaccatta
      721 caatatcgat attgttgcga catcggaaga ccaagcgaaa acaagttttg aagatattta
      781 taatatgtta gaagaaaata aagacacgat gaaaaacgtc tatcgctgga atttagttgc
      841 aatacaacat cgaaaaaatg gatcaacgat caaatataaa acatcaaatg caagaacaaa
      901 agatggttca agacctggtg cagttgcctt tgatgaagaa cacgcatatg aagattattc
      961 aaattatgca gtacacactt ctggattagg taaaaaagaa cggtcacgta gattccattt
     1021 aacgaccgat ggttatgttc gtggaagtgt tttagatgac agaaaagtat tagcacaaca
     1081 agtgttaaat ggagaaaagc caaactcaaa aatgttccct ttcatttgca agttggatag
     1141 tccggacgaa gttcaaaata aaacaaaatg ggcaaaagca aatcctatga ttttatacta
     1201 caaaccattg cgaatagaaa ttgaccaaca ttgggatgat gcgcaatcat cttctgaaat
     1261 tatggttgag tttatgacta aaagaatgaa ctgtccaact caagatccaa ccactgtagc
     1321 agtaaaatgg gatgatatta aagcaacaaa tcaacctatg ccatcgttaa aaatggctcc
     1381 agcgattgga ggtatcgatt ttgcggatgt tagagacttt tgtgcggtag ggttgttatt
     1441 taaaaaagaa ggtaagtata tctttaaaca tcatacattc atttgcgctg agtcattgaa
     1501 aatcacgaaa tttaaatttc cgattcatga agcagtggaa aaaggactgg caactatcat
     1561 acatgataat tatattgatg aagattatcc acttcaatgg tttttagaac aagcgaagga
     1621 acaccgcata ataaatattg caacagatag cttcagatat aaatccttga aagaagcatt
     1681 tacgagtgcg ggtgcgcctc tgattcaagt ccgttctggt ccatattcgc ataacagatt
     1741 atcaagcatg gtagataaac tatttgcctc gcataaaata atttttggcg atgatatgct
     1801 gatgcgctgg tactgtaaca atgtagctat taagtttgat gcgcgtggtg aaaaaacata
     1861 tataaaaatt gaaccgaaga cacgtaaaac ggatggtttt tttgctttgc tgcatacact
     1921 aatgcttgat gaagaattgc cagagacacg agaaataaaa ctgtatgatg tgactacgta
     1981 ctaggaggtg ataaatattg ggattcaaaa gttgggtgag tggatttttt aatgaagaac
     2041 aaagaacatt gaatttaacg gacacggtat ggtgttctat tccttctgag aaactaaaag
     2101 aattgtctat aaagaaatgg gcaattgatt cttgtgctaa taaaattgcc aacactctat
     2161 cttgtgcaga ggtactcacc tatgaaaaag gtgaagaagt ccgtaaaaaa aattggtata
     2221 tgtttaatgt tgaagcaaat caaaatcaga atgcaactga gttttggaag aaagcaatat
     2281 acaaacttgt atatgataat gaagctttga tatttatgca agatgaatat atttatgtag
     2341 ctgatagttt tactaaaa
//
LOCUS       DASDYK010000208         2353 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.210, whole genome shotgun sequence.
ACCESSION   DASDYK010000208 DASDYK010000000
VERSION     DASDYK010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2353)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2353)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2353
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.210"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(107..1090)
                     /locus_tag="U0308_002932"
     CDS             complement(107..1090)
                     /locus_tag="U0308_002932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM2317882.1"
                     /translation="MEKPFLTVVVPCYNEEEVLSESVTQLTNIIEKLVMSESISDKSQ
                     IMFVDDGSKDRTWELIQQYSESNEHVSGLKLSRNYGHQGALLAGLTEAHAYSDCVVSI
                     DADLQDDVNAIIEFIEKYHEGYDVVYGVRDKRDTDTYFKRNSALAFYRIMSKLGVNMV
                     PNHADYRLLSKRALTEFLRYKEENMFIRGIVPLLGFKSTKVFYNRNERFAGESKYPLK
                     KMVLFAVDGITSFSVAPIRLLLVLGSVIFMIGVVMGIYAIVQKIIGAVVPGWTSLIVS
                     LWLIGGIQLIGIGVLGEYIGKIFKQVKERPRFTIEENVFETKCKENKISER"
     gene            1382..>2353
                     /locus_tag="U0308_002933"
     CDS             1382..>2353
                     /locus_tag="U0308_002933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid biosynthesis protein"
                     /protein_id="HEM2317883.1"
                     /translation="MKFYIKEIQLTDSNTWKLQGFSEGKINSIQAYYNEIREYKHPEQ
                     KLNIAFTQDKNSFTATISVDELASLSLPNNQTVWKFKVNNDYPYTHLITDGPIINKPF
                     QPENSLYKYHFDFPEGILTLVSKPIELLASIEEYKLDSDVMSGSIKIKSPLPSNQFNA
                     KLIFKRRPTPSFYLFHEQQQSFDLGLITENIVNFSIPTKDLSTAFLVDNTNILDAIIE
                     VSSSHNKTGLSAFISIDADMKPAIPREIKIAAPLFATLRSYITGSNRLSFYFKKNIQG
                     LVSLSQLKETKKDLTLQFKLENSISEGQIVAKRADKKANTFEYNVEQV"
BASE COUNT          839 a          452 c          303 g          759 t
ORIGIN      
        1 ctaatttcta gcggtttaaa aatgcttatg caaagtaagt aaccaaaaat aagtataaaa
       61 aacgcattaa aaatataagc taacctattc ttcactctct ttacacctat ctctcgctga
      121 ttttattttc tttgcatttt gtttcaaaaa cattctcttc aatagtaaaa cgaggtcgtt
      181 cttttacttg tttaaagatt tttccaatgt attcacctag aacaccaata ccaattaatt
      241 gaattccgcc aattaaccac aaggaaacaa ttaaagatgt ccaaccaggt acaacagcac
      301 caatgatttt ttgaacaatg gcataaatcc ccattactac gcctatcata aaaataacag
      361 atccaaggac taataataat cgaatgggtg caacactgaa agatgtaatt ccatccacag
      421 caaataaaac cattttctta agtggatatt ttgattctcc tgcaaatctc tcatttcgat
      481 tgtaaaatac tttcgtagat ttgaaaccta ataatggtac aatgcctcga ataaacatgt
      541 tttcttcttt ataacgtaag aattctgtta atgcacgctt gctaagcagt cgatagtccg
      601 catgatttgg aaccatatta actcctagtt tgctcataat tctatagaaa gctaacgctg
      661 aatttctttt gaagtaagtg tcagtgtcac gtttatctcg tacgccataa acgacatcgt
      721 aaccttcatg atatttttct ataaactcaa taatcgcatt cacatcatct tgtaaatcag
      781 catcaataga cacgacacaa tctgaatatg catgtgcttc tgttaagcca gcaagtaaag
      841 ctccttgatg tccataattc cgacttaatt ttagtccaga tacatgttca tttgattctg
      901 agtattgctg tataagttcc caagttctat ctttacttcc atcatctaca aacataattt
      961 gacttttgtc actgattgat tcactcatca ctaatttttc tataatattt gttagttgtg
     1021 taacactctc gctcagaact tcttcttcat tataacaagg taccacaact gttaaaaatg
     1081 gcttttccac tctcactaca accccttatt gatatgctat tctataaaat tcagtatcta
     1141 cagcatatct tatttacaac agtttatcaa ctatctatgt aaaaataatc aagtatacag
     1201 ccaatataga cctctttcca atagcaaaaa ccctccaaat tatagaaact tttgccaagt
     1261 atgatttatc gcctttaacc ataatatgga gacctcttta attcaattaa ttattgtagg
     1321 gaattttatc aatatatgct aaaatataca atatgataat aaaaatttta aggagttaaa
     1381 gatgaaattt tatattaagg aaattcagct aacagattct aacacatgga aattacaagg
     1441 cttctcagaa ggaaaaatca atagtatcca agcatactac aacgaaatcc gagaatataa
     1501 gcaccctgaa caaaagttga atattgcttt tactcaagat aaaaattcat tcacagctac
     1561 tatttctgtt gatgaacttg ctagtctttc tctaccaaat aaccagactg tgtggaaatt
     1621 caaagtaaat aatgattatc catatacaca tttaatcaca gatgggccaa ttataaataa
     1681 acccttccaa ccagagaact cgctttacaa ataccatttt gattttcctg aaggtatttt
     1741 aacacttgtc agtaaaccta tagaactact agcttcgata gaggagtaca aattagattc
     1801 tgatgtgatg tctggttcta ttaaaatcaa gtcgccactt ccaagtaacc aatttaatgc
     1861 aaagctaatt ttcaaacgta gacctacacc aagcttttat ttatttcacg agcaacaaca
     1921 atcatttgat ttagggctta ttactgaaaa tatcgttaat ttctctattc ccaccaaaga
     1981 tttatctaca gctttcttag tagacaatac aaatatacta gatgccataa tcgaagtatc
     2041 atctagtcat aacaaaacag gcttatctgc attcatatcc attgatgcag atatgaagcc
     2101 agctattcct agagaaatta aaatagcagc gccacttttt gcaactctgc gctcctatat
     2161 tacaggctct aacagattat cattctattt caaaaaaaat attcaggggt tagtgagtct
     2221 gagtcaatta aaagaaacta aaaaagattt gacactgcaa ttcaaattag aaaacagtat
     2281 ctctgaaggt caaatagtag ctaaacgtgc agataaaaaa gcgaatacat ttgaatataa
     2341 tgtagaacaa gta
//
LOCUS       DASDYK010000209         2322 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.211, whole genome shotgun sequence.
ACCESSION   DASDYK010000209 DASDYK010000000
VERSION     DASDYK010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2322
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.211"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1838
                     /locus_tag="U0308_002934"
     CDS             <1..1838
                     /locus_tag="U0308_002934"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317884.1"
                     /translation="DIFIWLIKGLVTINSVMENVFFYSVKLISWPTTKAMETLINDPK
                     KGLIIIAVTLMGLTLMFIGGKIILGDRMSPQEFTRNFIMVTLVLIGLTGFMGSLEKLT
                     FAGVDVGKNAFSSEENSKISYQIVKDNITDLKALDAAGWKTTTPKKANYLNEDSWKTV
                     NFNEVIDEEFKHAEGLAKKRIDQDDNGQNIVEDLDSSFWMPSTDDYYYRYHVGFTAII
                     IQEVFILLVFAFSTLIIVETSFELGVKGVIGPFIAASDMATGQRIKNLLIDLIGAYVK
                     IVVLVFIIQLYRLFMNWTQSIHFSDSLVETTVLKCLIVVGAFFAVLKGSSSVQRLLGI
                     DVSQSFGQQALMGTMAGAQIMKGAGGLASGLTKGTARQFGKNGFIGRRAQSLSNKRQE
                     KAKKEALTESLGGKENYKEKMNPRRLAQREGFNEAQQILATEQAMKQQESSGTNSKNE
                     GSNKNNPGSSNKNTLSTNSSDNKGKNSIRPVHKGTSSANSSIAEQKDIQSNDTNTKKG
                     SNAVNRLNQQKANKPNSGKQTAPLGKQYSKNTSTSANGTTKTSFNKTESEEKKQYSTK
                     VNRDSQKSVKTASKKTASKMVPKKPQKTQINKKSIIKVTEPKVTD"
     gene            1855..2127
                     /locus_tag="U0308_002935"
     CDS             1855..2127
                     /locus_tag="U0308_002935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317885.1"
                     /translation="MYQIPKSTRTEVKLFLGLFFVDIAVIGIGVFFGIQTMGYVAGLW
                     RIIYIFALAGLSIFLIVRYNGHRMYRVLFQAIKKDTKKYYSVMGED"
BASE COUNT          887 a          307 c          443 g          685 t
ORIGIN      
        1 gagacatatt tatttggtta atcaaaggat tagtcactat aaatagcgta atggaaaatg
       61 tcttttttta ttcggttaaa ttgattagtt ggccaacaac taaagcaatg gaaacactaa
      121 ttaatgatcc caaaaaagga ctaattatta tcgctgtaac tcttatgggt ttaactttaa
      181 tgttcattgg tggaaagata atcttaggtg accgaatgtc tcctcaagaa ttcacacgaa
      241 attttattat ggttacatta gttcttatcg gattaactgg ttttatggga agtttggaaa
      301 aattaacatt tgcaggtgta gatgtgggta agaatgcatt tagttcagaa gaaaatagta
      361 agataagcta tcaaattgta aaagataata ttactgactt gaaagcgcta gatgcagcag
      421 gttggaaaac cacaacacct aagaaagcaa actatttgaa cgaagatagt tggaaaacag
      481 taaattttaa tgaagtaata gatgaagaat ttaaacatgc tgaaggatta gctaaaaaga
      541 gaatagatca agatgacaat ggacaaaata tagtagaaga tttagatagc agtttttgga
      601 tgccgtcaac agatgactat tattatcgct atcatgttgg gtttacagct atcattattc
      661 aagaagtatt tattctttta gtgtttgcat tctcaacttt aataattgtt gagacatcgt
      721 ttgaattagg agtaaaaggt gttatcgggc cttttattgc agcatctgat atggcaacag
      781 ggcagcgaat taaaaatctc ttgatagatt tgataggagc ttacgttaaa attgttgtat
      841 tagtttttat cattcaactt tataggctct ttatgaattg gactcaaagt atacattttt
      901 cagactcact agtagaaaca actgtattaa agtgtttgat tgttgtagga gcatttttcg
      961 cagtactaaa aggatctagt tcagtacaaa gactgttggg tattgatgta tctcaaagtt
     1021 ttggacagca agctttaatg gggacgatgg ctggcgcaca aattatgaaa ggtgctggtg
     1081 gtttagcaag tggattaact aaaggtacag cgagacaatt tggcaagaat ggttttattg
     1141 gcagacgagc acaatcttta tctaataaga gacaagaaaa agctaaaaaa gaagctctta
     1201 ctgaatcttt aggtggaaaa gaaaattata aagaaaaaat gaatcctaga agactagcgc
     1261 aacgtgaagg ttttaatgaa gcgcaacaaa ttttagctac agaacaagca atgaagcaac
     1321 aagaatcatc aggtactaat tcaaaaaatg aaggtagtaa taaaaataat ccgggttcta
     1381 gcaacaaaaa cacattatct actaacagtt cagataataa aggtaaaaat tctataagac
     1441 ctgtccataa aggaacaagt agtgcaaatt catctattgc cgaacagaaa gacattcagt
     1501 caaatgatac taatacaaaa aaaggttcaa atgcagtgaa cagactaaat caacaaaaag
     1561 ctaacaaacc taattcgggt aagcaaactg ctccattagg caaacagtat tcaaaaaata
     1621 cttctacttc tgcaaatggt accacgaaaa caagtttcaa taaaactgag tcggaagaga
     1681 aaaaacaata ttctactaaa gtgaataggg atagtcaaaa gagtgtaaaa acagctagta
     1741 aaaaaacagc tagtaaaatg gttcctaaaa agcctcaaaa aacgcaaata aataaaaaaa
     1801 gtattattaa agtgacagaa ccaaaagtca cagattaata aaggaggata taaaatgtat
     1861 cagattccta agtcaacaag aacagaagtt aaactatttt taggattgtt cttcgttgat
     1921 atagctgtta taggtattgg agtgttcttt ggaatacaaa cgatgggtta cgtggccggt
     1981 ttgtggagaa ttatatatat atttgcactt gccgggctta gcatattttt aattgttcgt
     2041 tataacggtc atcgtatgta tcgagttctt tttcaggcga ttaagaaaga tactaaaaaa
     2101 tattactctg tgatgggaga agattgattt ggctaaaagt aatattagaa agacagttat
     2161 agatgcatta ccaattgcta acatggataa taacgttatt ttgcaattta agaatggtat
     2221 attttatact attcttttac tcagaagcac ggatataaat gcattgaatg aagatgaatc
     2281 tattaaagca ataggacaat tcgctcgatt taacacacaa ta
//
LOCUS       DASDYK010000210         2290 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.212, whole genome shotgun sequence.
ACCESSION   DASDYK010000210 DASDYK010000000
VERSION     DASDYK010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2290
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.212"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(16..1565)
                     /locus_tag="U0308_002936"
     rRNA            complement(16..1565)
                     /locus_tag="U0308_002936"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            complement(1841..1916)
                     /locus_tag="U0308_002937"
     tRNA            complement(1841..1916)
                     /locus_tag="U0308_002937"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1881..1883),aa:Ala,seq:tgc)
     gene            complement(1935..2008)
                     /locus_tag="U0308_002938"
     tRNA            complement(1935..2008)
                     /locus_tag="U0308_002938"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1972..1974),aa:Pro,seq:tgg)
     gene            complement(2019..2092)
                     /locus_tag="U0308_002939"
     tRNA            complement(2019..2092)
                     /locus_tag="U0308_002939"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2056..2058),aa:Arg,seq:acg)
     gene            complement(2105..2190)
                     /locus_tag="U0308_002940"
     tRNA            complement(2105..2190)
                     /locus_tag="U0308_002940"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2154..2156),aa:Leu,seq:taa)
     gene            complement(2212..2283)
                     /locus_tag="U0308_002941"
     tRNA            complement(2212..2283)
                     /locus_tag="U0308_002941"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2249..2251),aa:Gly,seq:gcc)
BASE COUNT          519 a          665 c          493 g          613 t
ORIGIN      
        1 tttccttttc cttagaaagg aggtgatcca gccgcacctt ccgatacggc taccttgtta
       61 cgacttcacc ccaattatct gtcccacctt cggcggctgg ctccataaag gttaccctac
      121 cgacttcggg tgttacaaac tctcgtggtg tgacgggcgg tgtgtacaag gcccgggaac
      181 gtattcaccg tggcatgctg atccacgatt actagcgatt ccggcttcat gtaggcgagt
      241 tgcagcctac aatccgaact gagaatagtt ttatgggatt agctccacct cgcggcttcg
      301 cgaccctttg tactatccat tgtagcacgt gtgtagccca ggtcataagg ggcatgatga
      361 tttgacgtca tccccacctt cctccggctt gcaccggcag tcactttaga gtgcccaact
      421 aaatgctggc aactaaaatc aagggttgcg ctcgttgcgg gacttaaccc aacatctcac
      481 gacacgagct gacgacaacc atgcaccacc tgtcactttg tccccgaagg gaaagctctg
      541 tctccagagt ggtcaaagga tgtcaagacc tggtaaggtt cttcgcgttg cttcgaatta
      601 aaccacatgc tccaccgctt gtgcgggccc ccgtcaattc ctttgagttt caaccttgcg
      661 gtcgtactcc ccaggcggag tgcttaatgc gttagctgca gcactaaggg gcggaaaccc
      721 cctaacactt agcactcatc gtttacggcg tggactacca gggtatctaa tcctgtttgc
      781 tccccacgct ttcgcgcctc agcgtcagtt acagaccaga gagtcgcctt cgccactggt
      841 gttcctccac atatctacgc atttcaccgc tacacgtgga attccactct cctcttctgc
      901 actccagtct tccagtttcc aatgaccctc cccggttaag ccgggggctt tcacatcaga
      961 cttaaaagac cgcctgcgcg cgctttacgc ccaataaatc cggacaacgc ttgccaccta
     1021 cgtattaccg cggctgctgg cacgtagtta gccgtggctt tctggttaga taccgtcaag
     1081 ggacaagcag ttactcttat ccttgttctt ctctaacaac agtactttac gatccgaaaa
     1141 ccttcttcat acacgcggcg ttgctccgtc agactttcgt ccattgcgga agattcccta
     1201 ctgctgcctc ccgtaggagt ctgggccgtg tctcagtccc agtgtggccg atcaccctct
     1261 caggtcggct atgcatcgtt gccttggtag gccattaccc taccaactag ctaatgcacc
     1321 gcgggcccat ctgtaagcga tagccgaaac catctttcaa aagcgtggca tgcgccacac
     1381 tttatcattc ggtattagcc ccggtttccc ggagttatcc ccaacttaca ggcaggttgc
     1441 ccacgtgtta ctcacccgtc cgccactaac tttggaagag caagctcttc ctccgttcgt
     1501 tcgacttgca tgtattaggc acgccgccag cgttcgtcct gagccaggat caaactctct
     1561 ttaaaatata aattgaattt gaatacttat tcaacaccgt gaataagatt ccttgcgtca
     1621 aattgacttc gctagcaatt aaattactag tttgttttgt tgaaaacagc tttctgtttt
     1681 ctgccctgcg attaccagtg agactttacg tctcattgct tttcgtcttc ttctttgttc
     1741 agttttcaaa ggtcactttt tcttcttcgt tgcctttagc agcaactctt atatcttact
     1801 ctattctcta aacaatgtca acacattttt agaaataatt tggtggagcc tagcgggatc
     1861 gaaccgctga cctcctgcgt gcaaagcagg cgctctccca gctgagctaa ggccccataa
     1921 taaaaatcaa acaatcggga agacaggatt cgaacctgcg accccttggt cccaaaccaa
     1981 gtgctctacc aagctgagct acttcccgtt taataaagtg cgcccaagag gagtcgaacc
     2041 tctaaccgct tgattcgtag tcaagtactc tatccagttg agctatgggc gcatataaaa
     2101 ataatgccga ggaccggaat cgaaccggta cggatatcac tatccgcagg attttaagtc
     2161 ctgtgcgtct gccagttccg ccaccccggc atattggaac ttttgtaaac aagcggaaga
     2221 cggggttcga acccgcgacc cccaccttgg caaggtgatg ttctaccact gaactacttc
     2281 cgcatattta
//
LOCUS       DASDYK010000211         2283 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.213, whole genome shotgun sequence.
ACCESSION   DASDYK010000211 DASDYK010000000
VERSION     DASDYK010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2283
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.213"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            43..1056
                     /locus_tag="U0308_002942"
     CDS             43..1056
                     /locus_tag="U0308_002942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEM2317886.1"
                     /translation="MFGFGNKDIGIDLGTANTLVYMKGKGIVLREPSVVAMKKDTQEI
                     VAVGSDAKNMIGRTPGNIVAIRPMKDGVIADYDTTAAMMKYYIQKAGKSVNASKPRVM
                     ICVPSGITGVEKRAVIDATRQAGAKDAFTIEEPFAAAIGAGLPVGEPTGSMVVDIGGG
                     TTEVAVISLGGIVTSRSVRTAGDDLDEVIINYIRKKYNLLIGDRTAEAIKMEIGSASP
                     NGLDLSPFSIRGRDLVTGLPKTIEITPEEISGALADTVAAIIDAVKGTLENTPPELSA
                     DIMDKGIVLTGGGALLRNLDTVISEETKMPVIIADEPLDCVAIGTGKALENMDMYKRK
                     KMN"
     gene            1142..2029
                     /gene="mreC"
                     /locus_tag="U0308_002943"
     CDS             1142..2029
                     /gene="mreC"
                     /locus_tag="U0308_002943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEM2317887.1"
                     /translation="MPQFFLNKRLIILLISIIVLVALVGFSLRDRENASWPEQFVKDV
                     VGFGENIVAKPTSFISGAVDGVVDLKNTYTENQHLKERLEELAQLESEVADLKKENKD
                     LKESLDITDSIRDYDPLNASVISRNPTNWNDQVEIDKGSSDGVKPDMAVTTPSGLIGK
                     VTTTGAKSATVELLTSSDVKNRVSAKVQGKENAFGIINGYDSDTKLLELKQLPYDMKF
                     KKGQKVVTSGLGGKFPAGIFIGTIEKVETDKMGLSQTAFIKPGADMYDLNHVTVLKRS
                     AEAGTTDDDTTSSDTTGGQ"
     gene            2032..>2283
                     /gene="mreD"
                     /locus_tag="U0308_002944"
     CDS             2032..>2283
                     /gene="mreD"
                     /locus_tag="U0308_002944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HEM2317888.1"
                     /translation="MNVKKNIALPAIMVGTFILEGVFSLQFANGLFNDRHLFIPHFLL
                     IMLTIMTCFYKRNTTLAYAFILGLLFDIYYTGVMGIYFAI"
BASE COUNT          757 a          336 c          493 g          697 t
ORIGIN      
        1 aatgtatcct gtagaatatt acgaaggaaa aggagaatac agatgtttgg atttggtaat
       61 aaagatattg gaattgattt aggaacagcg aacacacttg tctatatgaa gggaaaaggt
      121 attgtccttc gtgaaccttc cgttgtagca atgaaaaaag acactcaaga aatagttgca
      181 gttggtagcg atgcaaaaaa tatgattggt agaacaccag gaaatatcgt tgcaattcgt
      241 ccaatgaaag atggtgttat tgctgattat gatacaactg cagcaatgat gaagtattac
      301 atacaaaaag ctggtaaaag tgttaatgca agtaaaccac gcgtaatgat atgtgtacct
      361 tctggaatta caggtgtaga aaaacgtgct gttattgatg cgactcgtca agcaggagct
      421 aaagatgcat ttacaattga agagccattt gctgcggcta ttggtgctgg gcttccagtt
      481 ggcgagccta caggtagcat ggttgtagat attggtggag gaactacaga agttgctgtt
      541 atttctctag gtggtattgt aaccagtcgc tctgtaagaa ctgctggtga tgatttagat
      601 gaagttatca ttaattacat tcgtaaaaaa tataatctat taattggtga tcgtactgcc
      661 gaagcaatca aaatggaaat tggctcagct agtccaaatg gtttggactt atctccattt
      721 agcattcgag gacgtgattt agtaactgga cttcctaaaa ctattgaaat tactccagaa
      781 gaaattagcg gagcacttgc tgatacagta gcagcgatta ttgatgctgt aaaaggaaca
      841 cttgaaaata caccaccaga attgtcagct gatattatgg ataaaggtat tgtactcaca
      901 ggtgggggag ctcttttacg taatttagat acagttattt ccgaagaaac aaaaatgcct
      961 gttattattg cagatgaacc acttgattgt gttgcaattg gaacagggaa agctttggaa
     1021 aatatggata tgtataaacg caaaaaaatg aactaaatgg acacgctcat ttatgtcata
     1081 taacaagatg aattagcttc aaaaaaatgg aaaaagagta ctaacgagat gaggtgtcgt
     1141 tatgccacaa ttttttctca ataaacgttt gattatcttg ttaatatcta ttattgttct
     1201 cgtcgcgcta gttggttttt ctttacgtga tcgtgagaat gcttcgtggc cagaacaatt
     1261 tgtgaaagat gttgttggat ttggcgaaaa tatagtagct aagcctactt catttatctc
     1321 aggtgcagtt gatggagtgg ttgatttaaa aaacacttat actgaaaacc aacatctaaa
     1381 agaacgttta gaagaattgg cacaacttga aagtgaagtt gcagacttaa aaaaagaaaa
     1441 taaagattta aaagaaagtc ttgatattac ggatagtatt cgtgactacg atccacttaa
     1501 tgcttctgtt atttctagaa atcctactaa ttggaatgat caagtagaaa tcgacaaagg
     1561 ttcaagtgat ggagtaaaac cggatatggc agttacaaca ccaagtggtc ttattggtaa
     1621 agtaacaacg acaggcgcta aatcagctac ggttgaatta ttaacttcgt cggatgttaa
     1681 aaaccgtgtt tctgctaaag tgcagggcaa ggaaaatgca ttcgggatta tcaatggtta
     1741 tgacagtgat actaagttat tagaattaaa acaattaccg tatgacatga aatttaaaaa
     1801 aggacagaaa gttgttactt ctggactcgg tggaaaattc ccagcaggta tctttatcgg
     1861 tacaattgaa aaagtagaaa ctgataaaat gggattatct caaaccgcgt ttattaagcc
     1921 aggtgctgac atgtatgatc taaatcatgt tactgtgttg aagcgttcag cggaagcagg
     1981 gacaacggat gacgatacaa ctagttcaga cacgactgga ggacaataat catgaacgtt
     2041 aagaaaaaca ttgcacttcc tgcaatcatg gttggaacct ttattcttga gggtgttttt
     2101 agtcttcagt ttgcgaatgg tctgtttaat gatagacatc tttttattcc acatttttta
     2161 cttattatgt tgacgattat gacttgtttt tataaacgaa atacgacttt agcatatgct
     2221 tttattctag gcttgctgtt tgatatttat tatactggcg tgatgggcat ttattttgct
     2281 atc
//
LOCUS       DASDYK010000212         2257 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.214, whole genome shotgun sequence.
ACCESSION   DASDYK010000212 DASDYK010000000
VERSION     DASDYK010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2257
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.214"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            30..2174
                     /locus_tag="U0308_002945"
     CDS             30..2174
                     /locus_tag="U0308_002945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317889.1"
                     /translation="MALIGKKSYVSYLQPVHLSTEEPFEELQNMRLQEAILYAECMLE
                     QLNFGEIVEMEWKLQTKKGEIFTFRFNIGQLEESLPLLEIIEEGVRNSLNEDEANRVL
                     NILPLRYEAKEKEYENPRQWVLENEENFYFMRSEQAYINHMEENQPTIEILPDISIEE
                     PREEIVEENEEIEPDVYYEVDTDEDFNLSLEDIHTSDEQPFNKDVVKVNTDGLYKRFS
                     GLDEKLNHIFSTYLSNEEVSNIFEKHKKKAEKNEVQKSINIIKKKMMEKEIQLEHNFI
                     EEKEILQAAEEEKQKLEERNKEDELKKLDEVYTEKIKSKKEEVTNEKTLEKEQALEIE
                     KQKYQQAALEIEKKYTNTLHDLTAKALEKLEKELQEKKNQVISNHSYQMTQKSKEANQ
                     SISIVMQQKNNSNHTELQKYLYSLAEEEKERIDKMIQELHPVLDESAKHELEEIKLRY
                     ESESDEKYVSMERELRMKQMEQEKELEERKQLANERQTVEQMKHEIQRSKEEYNNAIQ
                     LVEQMSKWMVPGDRKNVSEIKEKNSSILKTVILSITAILCATVLGLGILFGLKNMPEN
                     KDTAVAKEQISTQVQPEKVTYSEENPSLDALLNQKEFIKAAQLYPDSRNQIESTIFEL
                     KDVSALKRFNEVFKTSYGALDEAILSRDLHKQIQFYEENPTISYTSEQLETIGNAYVQ
                     TNKLQEATEIQNKLKSATLAKTIKEKSMSEES"
BASE COUNT          991 a          293 c          415 g          558 t
ORIGIN      
        1 ctttttttat attaaaaagg aggatagcta tggcacttat aggaaagaaa agttatgtga
       61 gttatttgca acctgtacat ttatcaacag aagaaccatt tgaggaactg caaaatatgc
      121 gtcttcagga agctatacta tatgcagaat gcatgctaga gcaattaaat tttggtgaga
      181 tagttgaaat ggaatggaag cttcaaacta aaaaaggaga aatctttacc tttaggttta
      241 atattggaca gctcgaagaa agcttacctc tcctagaaat tattgaagaa ggtgtaagaa
      301 actcacttaa tgaagatgaa gcgaatagag tacttaatat tttacctcta cgatatgaag
      361 ctaaagaaaa agaatatgag aatcctaggc agtgggtact agagaatgaa gaaaattttt
      421 attttatgag atcagaacag gcctatatta atcacatgga agaaaatcaa ccaaccattg
      481 aaatactacc tgatatttct atagaagaac caagagaaga aattgtcgaa gaaaatgaag
      541 aaatagagcc agatgtttat tatgaggttg atactgatga agattttaat ttatctttgg
      601 aagatattca cactagtgat gaacagcctt ttaacaaaga cgttgttaag gttaatacag
      661 atggattata taaacgattc tctggcttag atgaaaagct caatcatatt ttttctacgt
      721 atctttctaa cgaagaagta agtaatattt ttgaaaaaca taaaaagaag gcagaaaaaa
      781 atgaagtaca gaaaagtatt aacatcatta agaaaaaaat gatggaaaaa gaaatccagt
      841 tagaacataa ttttatcgaa gaaaaagaga tacttcaggc agcagaagaa gaaaaacaaa
      901 aacttgaaga acgaaataaa gaagatgaac taaaaaaact ggatgaagta tatacagaaa
      961 aaataaagtc gaaaaaagaa gaagtaacaa acgaaaaaac actggaaaaa gaacaggcat
     1021 tagaaataga aaagcaaaaa tatcagcaag ctgctttaga aatagaaaaa aagtatacca
     1081 acacattgca tgatttaact gcaaaagcct tagaaaaatt agaaaaagaa ctccaagaaa
     1141 agaaaaatca agtgatcagt aatcattctt atcagatgac tcaaaaaagt aaggaagcta
     1201 atcagagcat ttctatagtt atgcaacaaa aaaataatag taatcatacg gaattacaga
     1261 aatacttata tagtttagca gaagaggaaa aagaacgaat tgacaaaatg atccaggaac
     1321 tccatccagt tcttgacgaa tcagccaaac atgaattaga agagattaaa ctacgatatg
     1381 agtcggaaag tgatgaaaaa tacgtaagta tggagcgtga gctacgtatg aaacagatgg
     1441 aacaagaaaa agaacttgag gaaagaaaac aattagcaaa tgaaagacaa actgtagagc
     1501 aaatgaaaca tgaaattcaa cgttcgaaag aagaatataa taatgcaatt cagttagtag
     1561 aacaaatgtc aaaatggatg gttcctggag atagaaaaaa tgtttcagaa ataaaagaga
     1621 aaaatagttc tattcttaaa acagtcattc ttagtatcac agctattctt tgtgccactg
     1681 ttctaggtct aggcatttta ttcggattaa aaaatatgcc tgaaaacaaa gatacagcag
     1741 tggcaaaaga acaaatatct acgcaagttc agccggaaaa agtaacatat agtgaagaaa
     1801 atccgagctt ggatgctttg ctgaatcaaa aagagttcat aaaagcagct caattatatc
     1861 ccgatagtag aaaccaaatt gaatcaacta tttttgaact taaagatgtg agcgcgctga
     1921 agcgatttaa tgaagtgttt aagacttcat atggtgccct tgatgaagct atactgagtc
     1981 gagatttgca taaacaaatt caattttatg aagagaatcc taccatttcc tacacaagtg
     2041 aacaattgga aacgatagga aatgcctatg tccaaactaa taaattacaa gaggcaacag
     2101 aaatccaaaa taaattaaag agtgcaacat tggcaaaaac tatcaaagaa aaaagtatgt
     2161 cagaggaatc ttaaattgta taagaaaaac cagtaaataa ggaggagaga acgtatatga
     2221 cattatatga tagtttagaa caacttgaaa aatatga
//
LOCUS       DASDYK010000213         2223 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.215, whole genome shotgun sequence.
ACCESSION   DASDYK010000213 DASDYK010000000
VERSION     DASDYK010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.215"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            159..1982
                     /locus_tag="U0308_002946"
     CDS             159..1982
                     /locus_tag="U0308_002946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEM2317890.1"
                     /translation="MASPLKRLLIGRPLKTSEAGDQKLGKLKALAVLSSDALSSIAYG
                     TEQILLVLVTVSAAAMWYSLPIALCVLVLLFALNLSYKQIIYSYPHGGGAYIVSRENL
                     GNNAGLIAGGSLLVDYMLTVAVSVSSGTDAIVSAVPSLYPFAVPIAVLLVVGVTIINL
                     RGITESASLLAIPVYLFVFSIIALIFTGLFKVLTGMDASHETAAVGTHVQGVTIFLLL
                     RAFASGSASLTGIEAISNAVPLFKEPRPKNAAKTLTLMAGLLGFFFVGITVLAFVYGT
                     VPELKVTVLSQIAENVFGRNFMFYFIQATTALILVLAANTGFSAFPMLAFNLAKDKFM
                     PRMYLARGDRLGYSNGIITLAVGSILLIILFKGKTELLIPLYSVGVFIPFTLSQTGMI
                     VKWWKQRPKGWKKSLSANLLGASISFTVLLVLFLTRIESVWPVFVFMPIMIYVFHRTR
                     HHYRKVGPQLRIDETMDLPDFKGNAVIICVSDTTKVVEGALQYAKSIGDTVIAVHISI
                     DKKQEKEFVERWNRVHPEVRMANLFSPYRSISDPLMKFIDTAKQKADQDNYSLTVLIP
                     QFIPRKGWQNVLHNQTSLLIRTRLLMKRDVVVSTYPYHLKE"
BASE COUNT          698 a          359 c          424 g          742 t
ORIGIN      
        1 gacgtaaaaa caagcattat gaacaattat tcacttgaaa gataattagt cagctaaaat
       61 aatacaaatt agtattacaa tctaaaatca gctgtgctat aatgtgtctg gtcaacttga
      121 agttagctaa aaatcaaata aaaaaggtag ggaatacaat ggcttcgccg ctaaaaagac
      181 tattaatcgg ccgccctctg aaaacatcag aagctggaga ccaaaaactg gggaaattaa
      241 aagctttagc agttctgtca tcagatgcac tttcttctat tgcgtatggt acagaacaga
      301 tcttattggt acttgtaact gttagtgctg ccgctatgtg gtattcatta ccaattgcgc
      361 tttgtgtact tgttcttttg tttgctctta atctgtctta caaacaaatt atatactctt
      421 atccgcatgg tggaggagct tatatcgttt caagagagaa tttggggaat aatgccggtt
      481 taatcgcagg tggatcttta ctagtagatt atatgcttac agttgctgta agtgtttctt
      541 ctggaacaga tgcaatcgtt tctgctgtcc catcattata tccgtttgca gtgcctatag
      601 ctgtacttct tgtcgttgga gtaacgatta tcaatctgag aggtattact gaatcagcta
      661 gtttacttgc aataccagta tatttgtttg ttttttctat tatagctctt atatttacag
      721 gtttatttaa agtattaact ggtatggatg caagtcatga aacagctgca gtagggactc
      781 acgtacaggg tgtaaccatt tttcttttac taagagcatt tgcatctggg tcagcttctt
      841 taacgggtat tgaagctatc tcaaatgctg ttcctttatt taaagaacca cgaccaaaaa
      901 atgccgcaaa aacattaaca ttaatggcag gcttacttgg tttcttcttt gtcggaataa
      961 cagtacttgc ttttgtttat ggaactgttc ctgagctaaa ggtaacggtg ctttctcaaa
     1021 ttgctgaaaa tgtatttggc agaaacttca tgttttattt tattcaagcc actacggcac
     1081 ttattttagt tttagcagct aataccggat tttctgcatt tccgatgtta gcatttaact
     1141 tggcgaaaga taaatttatg ccaagaatgt atttagcaag aggagataga ctgggctact
     1201 ctaatgggat tattacttta gctgtgggtt ctatcctact cattattttg tttaaaggga
     1261 aaacggaatt actcattcca ttatactctg tcggagtgtt cataccattt acgttgtctc
     1321 aaacagggat gatagtaaaa tggtggaaac agcgtcctaa aggttggaaa aaatcattat
     1381 cggctaattt acttggagca tcaatttcat ttacagtatt attagtgtta ttcttaactc
     1441 gaattgaatc tgtttggcca gtatttgtct ttatgccaat tatgatttat gttttccatc
     1501 gtacgagaca tcattatagg aaagtcggac cgcaacttag aattgacgaa acaatggact
     1561 tgccggactt taaagggaat gccgtcatta tttgtgtgtc tgataccacc aaagttgtag
     1621 agggtgcatt acaatatgct aaatctattg gtgatacagt cattgctgtt catatctcta
     1681 ttgataaaaa acaggaaaaa gaatttgttg agagatggaa tagggtgcat cctgaagtgc
     1741 gtatggctaa tctgttttct ccgtatcgat ctatttcaga tccattaatg aagtttattg
     1801 atacagctaa acaaaaagca gatcaagaca attactcact aacagtatta ataccacaat
     1861 ttattcctag aaaaggttgg caaaatgtcc ttcataatca aacaagccta ttgattcgca
     1921 caagacttct aatgaaaagg gatgtagtgg tttccacata tccttatcat ttaaaagaat
     1981 aacaagagaa aaaaacggaa gagaccttcg ggggaagagg gggaactctt ccgtttttgt
     2041 aatggaacaa tgtaagcata acggttgttt atttatttgt aaaaagtgga aattttgatt
     2101 ttaaagaaga atattcatcg gaaaactaaa tttcctttag atgaaaaagg cattttaaat
     2161 gccgagtttt cctagataat taaaaaaact gctcgaatca agttttttat acaatttgaa
     2221 aaa
//
LOCUS       DASDYK010000214         2168 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.216, whole genome shotgun sequence.
ACCESSION   DASDYK010000214 DASDYK010000000
VERSION     DASDYK010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.216"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..173
                     /locus_tag="U0308_002947"
     CDS             <1..173
                     /locus_tag="U0308_002947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317891.1"
                     /translation="GEEASIPEPPELTELEKLTQDYADLMLYVAEVEQKTEQTQQDNA
                     NLLLSLAEAGVL"
     gene            174..320
                     /locus_tag="U0308_002948"
     CDS             174..320
                     /locus_tag="U0308_002948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XkdX family protein"
                     /protein_id="HEM2317892.1"
                     /translation="MINWYEKVKDYFLGGYYTEADVNKFVTLKKITRSQADEIIAMKE
                     AKAE"
     gene            361..666
                     /locus_tag="U0308_002949"
     CDS             361..666
                     /locus_tag="U0308_002949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003733957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317893.1"
                     /translation="MVLGSISIAGMSVGELIALISLIAAIVGFVIRWALVAPLRNMID
                     SLDITLKSLREEMSESKKDRMSLREKQNDHDKEIALLKREDKAIWKYVTEKNEKEVK"
     gene            666..947
                     /locus_tag="U0308_002950"
     CDS             666..947
                     /locus_tag="U0308_002950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003723294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HEM2317894.1"
                     /translation="MKINWKVRLKNWRTVVATLITVLGVAWTAGGFTISDLDNWSVLW
                     LSFVRFLNSPMAIITTIVAVVGILMDPTTSKFSDSLKVMNYSEPRKDDK"
     gene            947..1897
                     /locus_tag="U0308_002951"
     CDS             947..1897
                     /locus_tag="U0308_002951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase family
                     protein"
                     /protein_id="HEM2317895.1"
                     /translation="MSVLQYNYINKNQFSRPGYKLLRVSKIVMHYTANPGASADNHRR
                     YFRDLKERYASAHIFIDDKEAICIIPLNEVAYHANERSCKLTALQASTSYYRGGNANL
                     TSIGIEMCLDKNGNITVATFNRSVDVAAELCKTYDLTASDIIRHYDVTGKNCPAPWVA
                     KPSELTRFRNAVNAKLKGASQNKNRHDGKVVDSAPLLTKMDFKSSPFRMYKAGTEILV
                     YEHNQYWYKTYIDDKLYYMYKSFCDVVAKKDAKGRIKVRIKSAKDLRIPVWNNTKLNS
                     GKIKWYAPNTKLAWYNNGKGYLELWYEKDGWYYTANYFLK"
     gene            2042..>2168
                     /locus_tag="U0308_002952"
     CDS             2042..>2168
                     /locus_tag="U0308_002952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HEM2317896.1"
                     /translation="MRLFVDESGTITRNKNLNNRYFVIAFLETEQPYNVIRQFREA"
BASE COUNT          780 a          320 c          451 g          617 t
ORIGIN      
        1 ctggtgaaga agcaagcatt ccagaaccac cagaattgac cgaacttgaa aaattaacac
       61 aagattatgc agacttaatg ctatatgtag cagaagtcga acagaagacg gaacaaacgc
      121 aacaagataa tgcaaactta ctattatctt tggcggaggc aggtgttttg taaatgatta
      181 actggtatga aaaagtaaaa gattattttt taggcggcta ctatactgaa gcagatgtta
      241 ataaattcgt tactttaaaa aagataacga gatcacaagc agatgaaata atcgctatga
      301 aagaagcaaa agccgaatag gcttattttt tatggaccga caacgagggg atgatgaaaa
      361 ttggtacttg ggagcatatc gatagcagga atgagcgtgg gggagttaat agctttaatt
      421 agcttaatag cggcaattgt ggggtttgta attagatggg cattagtcgc gcctttgcga
      481 aatatgattg attctcttga tataacttta aaaagtctta gagaagaaat gtctgaaagc
      541 aagaaagatc gtatgagttt acgagaaaag caaaacgacc acgataaaga gattgcttta
      601 ttgaaacggg aagataaagc gatttggaaa tatgttactg aaaaaaatga aaaggaggtg
      661 aaatgatgaa aattaactgg aaggtacgat tgaaaaactg gcgaactgtt gtggcaactc
      721 ttattacagt tctaggagtc gcgtggacag caggaggttt tactatatct gatttagata
      781 actggtccgt cttgtggctt tcgtttgtaa ggttcctaaa tagccctatg gcaattatta
      841 ccacaattgt agccgttgtc ggtattttga tggacccaac aactagtaaa ttctccgata
      901 gtttgaaagt aatgaattat tcagaaccaa gaaaggatga taaataatgt cagtactaca
      961 atataattat atcaataaaa atcaattttc acgcccagga tataagttgc ttagagtaag
     1021 taagattgtt atgcactata ctgcaaaccc tggggcaagc gcagataatc acagacgata
     1081 ttttagagat ttaaaagagc gttacgcttc tgcacatatt tttattgatg ataaagaagc
     1141 tatttgtatt atccctctaa atgaagttgc ataccatgca aacgaaagaa gttgcaaatt
     1201 aacagctctt caagcaagta caagttacta tcgcggcgga aatgcgaatt taacctcaat
     1261 tggtattgaa atgtgcttag ataaaaacgg gaatattact gtagcaacat ttaatcgatc
     1321 agttgatgta gctgcagagc tatgcaaaac atacgattta acggctagtg acattatccg
     1381 tcattacgat gtaaccggaa aaaattgtcc tgcgccttgg gttgcgaaac cttccgaatt
     1441 aacacgtttc agaaacgcag tcaatgcaaa attgaaaggt gcatcacaaa ataaaaacag
     1501 acatgatgga aaagtcgttg acagtgcgcc attgctcaca aaaatggatt ttaaatcgtc
     1561 gccattccgc atgtataaag cagggactga aattcttgtt tatgaacata atcaatattg
     1621 gtacaagact tatattgatg acaaactata ctacatgtat aagagctttt gtgatgttgt
     1681 agctaaaaaa gatgcgaaag gtcgcatcaa agttcgaatt aaaagcgcga aagaccttcg
     1741 tattccagtg tggaataaca caaaattgaa ttctgggaaa attaaatggt atgcacctaa
     1801 tacgaaatta gcatggtaca acaacgggaa aggttattta gaattgtggt acgaaaagga
     1861 cggttggtat tacactgcta actacttctt aaaataaaac tattgccctc gcgttttgcg
     1921 ggggtttttt gttttatatt gaaggggatt tttcataact tcgaattata agtacatacg
     1981 ttccacttcc tcatacttaa atagtataat ataatttaag ttaaaaagag gagaatttgg
     2041 gatgagactt tttgtagatg agtcaggaac tataactaga aataaaaatt taaataacag
     2101 atattttgtt attgcttttt tagaaacgga gcaaccttat aatgtaatta gacagttcag
     2161 agaagcaa
//
LOCUS       DASDYK010000215         2090 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.217, whole genome shotgun sequence.
ACCESSION   DASDYK010000215 DASDYK010000000
VERSION     DASDYK010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.217"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            43..>2090
                     /locus_tag="U0308_002953"
     CDS             43..>2090
                     /locus_tag="U0308_002953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BspA family leucine-rich repeat surface protein"
                     /protein_id="HEM2317897.1"
                     /translation="MKKFSMRVVLIISVLFIAFGSANVSIAQERDTTNKLPEEELGSL
                     DTSNLIAEEVAQEKPAEVENLEEIPTTDELMQNPDVREQPVADSDDSDLTVVSSGAYW
                     TIYRNTANGEYSMRMFGNVPSSRPTAWNSYLKSIKHIEIEEATLTGSFASYFRNNVFT
                     VLESVRIERSNLSGVTSFEMAFYSPTLQKVIIRDNDYPTAPSLRTTEYMFGYTHKLTE
                     LDVSGLDTSAVTNMNCMFNYCSVLEELDVSNFDTSSVTTMRDMFGSSGKLEKLDVSNF
                     DTSSVTTMQAMFYGCTSLEELDVSNFDTNSVTNMSYMFYNCAGLEELDVSNFDTSSVT
                     NMYGTFVGCNSLEELDVSNFDTSSVTTMQAMFNACRALEKLDVSNFDTSSVTTMQAMF
                     ENCTGLGELDVSNFDTSSVTTMAYMFDGCTSLEELDLSNFDTSSVTTMAYMFQNCTAL
                     KSLYLDNFTTPKTMTGMFTGTTALTYLFASHNLRAFDGLANTRWYDEKNWVQFSNYKE
                     LQMYHEYQREPTGYRKGVFLSLTMDAMGGQFEDAEEQKVQNKVSGEYWEEVVPVKEGH
                     YFDGWYLDRNFTNKFDFSLPVAVSTTIYAKWVENYTVVIPASISLNEATELKVEGINR
                     GSKTLSVGLNYEETTISESNKLTLSNTADTTVQCLAPLSWDGSETNPKNAILTLAPGS
                     "
BASE COUNT          638 a          344 c          478 g          630 t
ORIGIN      
        1 gtttgcatct agaaattaac tacgaaagaa ggaggggagc tgatgaaaaa gttttccatg
       61 cgagtggtcc ttattatttc tgtgcttttt attgcttttg ggagcgctaa tgtttctatc
      121 gcacaagaaa gggatacaac gaataagctt ccagaagagg agctgggttc tctggatacc
      181 tctaatctca ttgcagaaga agttgcgcaa gagaaaccag ccgaggtcga gaatctagaa
      241 gaaatcccaa ctacggatga gttgatgcaa aatccagatg ttcgagagca gcctgttgct
      301 gattcggatg attcggattt aacagtggta agctcaggtg cttactggac gatttatcgt
      361 aatactgcga acggcgaata tagcatgcgt atgtttggca acgtgccgag cagtagacca
      421 accgcttgga atagttattt aaaaagcatt aaacatatag agattgaaga agctacgctg
      481 acaggaagtt ttgcatcgta ttttagaaat aatgttttca cagtacttga gagtgtgagg
      541 attgaacgtt caaacttgtc tggagtgaca tcttttgaaa tggcatttta tagtccaaca
      601 cttcaaaaag tgataatcag agacaatgat tatccgacag caccatcttt acgcactacg
      661 gagtatatgt ttggttatac tcacaaactt acggagcttg atgtgagtgg tcttgatacg
      721 agtgctgtaa ctaatatgaa ttgtatgttt aactactgta gcgtacttga ggaactggat
      781 gtaagtaatt ttgataccag ttccgttact actatgaggg acatgtttgg tagtagtgga
      841 aaattggaga agctggatgt aagcaatttt gataccagtt cagtaactac tatgcaggcc
      901 atgttttatg gttgtactag ccttgaagag cttgatgtaa gtaattttga taccaattca
      961 gtgactaaca tgagctacat gttttacaat tgcgctggtc ttgaagagct tgatgtaagt
     1021 aattttgata ccagttccgt tactaatatg tatggcacgt ttgttggctg taatagtctt
     1081 gaagagcttg atgtaagtaa ctttgatacg agttcagtaa ctactatgca ggccatgttt
     1141 aatgcctgta gagcacttga gaagctggat gtaagcaatt ttgatacgag ttcagtaact
     1201 actatgcagg ccatgtttga aaattgtact ggccttggag agcttgatgt aagtaacttt
     1261 gatacgagtt cagtaactac tatggcttac atgtttgatg gatgtactag ccttgaagaa
     1321 ttagatttaa gtaattttga taccagttca gtaactacta tggcttacat gtttcaaaat
     1381 tgtacagcgt taaaatcttt atatctggat aattttacta ccccaaagac tatgacaggt
     1441 atgtttactg gaaccaccgc cttaacctac ttgtttgcca gtcacaattt aagagctttt
     1501 gatggcctag caaatacaag atggtatgac gaaaagaatt gggtacagtt ttcgaattac
     1561 aaggaactac agatgtatca tgaataccaa agggaaccta ctggctacag aaaaggtgtg
     1621 ttcctttcct taacgatgga tgcgatgggt gggcagtttg aagacgcgga ggaacaaaag
     1681 gtacaaaata aagtttctgg ggaatactgg gaagaagtgg ttcctgtaaa agaaggacat
     1741 tattttgatg ggtggtatct tgatcgaaac ttcactaata agtttgattt ttctttgcct
     1801 gttgctgtat ctacaactat ctacgctaaa tgggtagaaa attatacggt ggttattcca
     1861 gcttctattt ccttaaatga agctactgaa ttgaaagtag aagggattaa tcgaggaagt
     1921 aaaactttat ccgtaggctt gaattatgag gaaacaacca tttctgagag caacaagcta
     1981 accttgtcca atacggcaga cacaacagtc caatgcttgg cgccactgag ttgggacggt
     2041 tccgaaacta atccaaaaaa tgccatttta acccttgccc caggttcgga
//
LOCUS       DASDYK010000216         2068 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.218, whole genome shotgun sequence.
ACCESSION   DASDYK010000216 DASDYK010000000
VERSION     DASDYK010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2068)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2068)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2068
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.218"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(122..1006)
                     /locus_tag="U0308_002954"
     CDS             complement(122..1006)
                     /locus_tag="U0308_002954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEM2317898.1"
                     /translation="MANITAQMVKELREKTGAGMMDCKKALVETEGDMEKAIDYLREK
                     GIAKAAKKSDRVASEGMTHVISNEKHAVVLEVNAETDFVAKNDNFQQLVDALAKQILA
                     VRPDSLEDALKTEMPNGQTVQDYITEAITKIGENISLRRFEVKEKADNSAFGEYIHMN
                     GRIGVLTLLEGTTDTTVAKDVAMHIAAINPKYISREDVSTEEVEHEKEVLTQQALNEG
                     KPANIVEKMVEGRLKKYLSEISLEDQPFVKNPDITVGDYVKQSGGKVVSFVRFEVGEG
                     IEKKEDNFVEEVMSQVKK"
     gene            complement(1086..1835)
                     /gene="rpsB"
                     /locus_tag="U0308_002955"
     CDS             complement(1086..1835)
                     /gene="rpsB"
                     /locus_tag="U0308_002955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEM2317899.1"
                     /translation="MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQ
                     KTVKKVDEAFNFMREVASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLT
                     NFETIQKRIQHLKKIERMEADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDA
                     LFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMA
                     DAIIEVNQGEELTEAEVAPVEEKATEETTEA"
BASE COUNT          550 a          414 c          353 g          751 t
ORIGIN      
        1 aaaaaatccc acaatcattt gatattgtat gatattcaaa tgaaatcaaa aaaataaaaa
       61 ccccgtattt cctaagaaaa tacggggttt tgatatcata taaaatcgat ttaaagtgga
      121 tttatttttt cacttggctc attacttctt caacaaagtt atcttctttt ttctcgattc
      181 cttcgcctac ttcgaaacgt acgaatgata caactttacc accgctttgt ttcacgtagt
      241 cacctacagt gatgtctggg tttttaacga aaggttggtc ttctaaggaa atttcgctta
      301 gatatttttt caaacggcct tctaccattt tttcaacgat attagctggt ttgccttcgt
      361 ttaacgcttg ttgagttaat acttcttttt cgtgttccac ttcttcagta gaaacgtctt
      421 cacgagaaat gtatttaggg ttgattgcag cgatgtgcat tgcaacgtct tttgcaacag
      481 tagtatcagt agttccttca agaagtgtaa gaacaccaat acgtccgttc atgtggatgt
      541 attcaccgaa agcagagttg tctgcttttt cttttacttc aaaacgacga agggaaatgt
      601 tttcaccgat ttttgtaatt gcttcagtga tgtagtcttg aacagtttga ccattaggca
      661 tttctgtttt aagcgcatct tctaagctat ctggacgaac tgcaagaatt tgtttagcta
      721 aagcgtcaac taattgttgg aagttatcgt ttttagcaac gaaatctgtt tcagcattta
      781 cttcaagtac tacggcatgt ttttcattgc tgattacatg agtcatacct tcagaagcaa
      841 cacgatcaga ttttttcgca gctttagcga ttcctttttc acgaagatag tcaattgctt
      901 tttccatatc tccttctgtt tctacaagtg cttttttaca atccatcata ccagcaccag
      961 ttttttcgcg taattctttt accatttgag ctgtaatatt agccatttat tttccctcca
     1021 atttttctct ttaaaaaagg tgataagaat agtgccttat caccttgaaa gtttcaaata
     1081 aaatcttatg cttcagtagt ttcttctgta gctttttctt ctacaggagc aacttccgct
     1141 tccgttaact cttccccttg gttcacttca atgatagcgt cagccatttt agcagttaaa
     1201 agtttaaccg cgcggatagc gtcatcattt gcagggatta cgtagtcgat ttcatccgga
     1261 tcacagtttg tatcaacaat accgatgata ggaatatgaa gtttacgagc ttctgcaacc
     1321 gcaatacgtt ctttgcgtgg gtcaacgatg aataatgcat caggaagacc tttcatgtct
     1381 ttgattccgc ctaagaagcg ttctaatttt tcttgttctt ttttaagaag gacaacttct
     1441 tttttaggaa ggacttcaaa agttccatct gcttccattc tttcgatttt tttaaggtgt
     1501 tgaatacgtt tttgaatagt ttcaaagtta gttaaagtac cacctaacca acgatgattc
     1561 acgaaatatt gtccagaacg gatagcttcg tcgcgaacgg attcttgagc ttgtttttta
     1621 gttcctacaa acaggatagt tccgttgtcg ctagctactt cacgcatgaa gttgaaagct
     1681 tcgtctactt ttttcactgt tttttgtagg tcaatgatat aaataccatt tctttctgtg
     1741 aagatatatt tcttcatttt tgggttccaa cggcgcgttt ggtggccgaa gtgaactcct
     1801 gcttcgagta attgtttcat tgaaataaca ggcattgtgt tattccctcc tattggttta
     1861 ttttttgcgg ataaccgccc tccgcatgga tcaaccagct gaaaaactta agcgaacaag
     1921 tcgttaagca ccttctcagt ctgtcaccgt gcgtgtgtga tttaacaccg tttcctaata
     1981 taccataaaa acaggaaata tgcaacccgt ggtacatatc ttctttcttc gataactaat
     2041 ttttttcaac aatcatttca agcttttc
//
LOCUS       DASDYK010000217         2063 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.219, whole genome shotgun sequence.
ACCESSION   DASDYK010000217 DASDYK010000000
VERSION     DASDYK010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.219"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            82..558
                     /locus_tag="U0308_002956"
     CDS             82..558
                     /locus_tag="U0308_002956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase"
                     /protein_id="HEM2317900.1"
                     /translation="MYKYTLCFIQRADEILLLNRQKSPWMGSWNGVGGKIEQGETLLE
                     SVQREITEETGISSNDYEIRDIGEMKWFVDGENLGGMHLFLANLPDNYVYPTPRATDE
                     GILDFKKRKWILNPENTGVVNNLPYIIKHAPVFPARIEVSTKYHENTLLHINHQSL"
     gene            complement(596..841)
                     /locus_tag="U0308_002957"
     CDS             complement(596..841)
                     /locus_tag="U0308_002957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317901.1"
                     /translation="MNKLLLITAAGYIVGVRSIEKENNQSILLNDVYINNPSQRLIDH
                     FESLEIAKEQVIGHKKLSTNDAQNLISRWEASYFTTS"
     gene            complement(838..2043)
                     /locus_tag="U0308_002958"
     CDS             complement(838..2043)
                     /locus_tag="U0308_002958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2317902.1"
                     /translation="MKEKLFNKGFVLITLINFVVYLVYYLLMVIIAVIAQEELNASLG
                     EAGFASGIYIIGTLLARLYMGKKLELFGRKRVLRFGILFFLVTTMAYLYMPTIAIMFI
                     IRFLNGFAYGTTSTATNAIVTAYIPNSRNGEGINYYGLSTSLAAAIGPFIGMILLSKT
                     SFYTIIIFSTVIVLLTALLCFYLPVKNIVLTTEHRKALQTWTVKSFIEYKVIPITFIA
                     FLMGISYSSVLTFLASYAREINLVSAGTFFFVVYALVITLTRPMSGKLFDAKGEKYVM
                     YPSYLFLAVGLVVLSTATSSLVLLISGGLIGLGYGTFMSNGQAVCLKVCEPHRIGIGL
                     STYFIGLDLGLGIGPYIMGEIHHVLSFQGIYIIAGAIAFICVFIYMFLSRKKVSSGAQ
                     EQLKGSEEV"
BASE COUNT          721 a          384 c          368 g          590 t
ORIGIN      
        1 ccaataaaaa cgcggatgct gctctttttg tgcctgaaat tatgatatac tgaataaaaa
       61 acttggaaaa taggtggaaa tatgtataaa tatacccttt gttttatcca aagagccgat
      121 gaaattctat tgttaaatag acaaaaatcc ccatggatgg gaagttggaa tggtgttggt
      181 ggcaaaattg agcaagggga aacacttctt gaatcggtcc aacgggaaat cacagaagag
      241 accggaattt cctcaaatga ctacgaaatt cgtgatatcg gtgaaatgaa atggtttgtg
      301 gatggcgaaa atctgggagg tatgcattta tttctggcca atcttccgga taattatgta
      361 tatccaacac ctcgtgcaac cgatgaagga atacttgatt ttaaaaaaag aaaatggata
      421 cttaatccgg aaaatacagg tgtagtgaac aatttacctt atataatcaa acatgctcca
      481 gtgttcccgg ctagaataga agtttcaaca aaatatcatg agaacacatt attgcatatt
      541 aatcatcaat ctttataaaa aaagcattgc gattattcgc aatgcttcca tactatcatg
      601 atgtcgtgaa ataacttgct tcccagcgac ttattaaatt ttgagcatca ttagtggata
      661 actttttatg accgattact tgctctttgg caatttcgag actctcaaaa tgatcaatta
      721 atcgttgtga aggattatta atgtagacat cgtttagtag aatagattgg ttgttctcct
      781 tttctatact tctaactcct acgatataac ccgctgctgt aatgagtaat aatttattca
      841 tacttcttca ctccctttta gttgttcctg tgcaccacta gacacttttt ttctggataa
      901 gaacatatag atgaatacgc aaataaatgc gatagcaccg gcaataatgt aaataccttg
      961 gaatgaaagc acatgatgaa tttcacccat aatataaggc ccaataccaa gtcctaaatc
     1021 aagcccgata aagtaggtag ataggccaat cccaatacgg tgaggttcac atacttttaa
     1081 acagacagct tggccattcg acataaacgt tccataacct aagccgatga gtccgcctga
     1141 aataagtagc acgagacttg atgttgctgt actaaggacc actaatccaa ctgctaaaaa
     1201 gagataactt ggatacatca catatttttc gccttttgca tcgaaaagtt ttccagacat
     1261 tgggcgagtt agagtaataa ctaatgcata gacaacaaag aagaacgttc cagcactcac
     1321 taaattaatt tctctagcat aggaagcaag gaatgtaagc acactggaat aagaaatccc
     1381 cattaagaag gcaataaatg ttattggaat aactttatat tcaataaaac ttttgacggt
     1441 ccaagtttgt aaggccttcc ggtgttcggt tgttaaaaca atatttttca cgggtaaata
     1501 gaagcaaagt agcgcagtta ataagacaat aaccgtggag aaaataataa tcgtataaaa
     1561 gctcgttttg ctaagtaaaa tcattccgat gaacggtcca atcgcagctg cgagacttgt
     1621 gctgaggcca taataattaa tcccttctcc gtttctagaa ttaggaatat aagctgtgac
     1681 aatcgcattg gtagcagttg aagttgttcc gtatgcgaat ccatttaaaa aacgaataat
     1741 aaacataatg gcaatcgttg gcatgtataa gtaagccatc gtcgttacta agaaaaataa
     1801 aatcccaaat cttaaaaccc gcttacgacc aaatagttcc agctttttcc ccatgtaaag
     1861 tcgtgcgagg agcgtcccga taatataaat cccagacgca aatccggctt caccaagaga
     1921 cgcgttcaac tcttcttgag caataacggc aataataacc attagcaaat aataaacgag
     1981 ataaacgaca aagttaatca atgttattaa gacaaaaccc ttgttaaata atttttcttt
     2041 catagaataa aatcccttcc tac
//
LOCUS       DASDYK010000218         2061 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.220, whole genome shotgun sequence.
ACCESSION   DASDYK010000218 DASDYK010000000
VERSION     DASDYK010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.220"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            78..1106
                     /locus_tag="U0308_002959"
     CDS             78..1106
                     /locus_tag="U0308_002959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2317903.1"
                     /translation="MKLEDIARLANVSKSAVSLALNGKAGVSEETRLHILQIVEENNY
                     VPLRNTNKKMKKKSTIRFIACKSPNLITEQYQNLPFFSELLSYLSAEIASYPYDLVIS
                     TFDATTILEELAEAEKEQPTAGLILLGTNLNAEEINRIQQEYPKIVVLDTHHPHISAN
                     FVSINNFLGGYKAADYLLQLAHTKIGYVMGVPRIKNFDERKSGFFARLEEADISVPEQ
                     HVFHLPAMQIQEEVSVKEAIAELQDLPSALFCENDYMAISMIKMLQSLSIKVPEQVSV
                     LGFDNINESKVITPELTTVHVKKRDIAEQTLALLSKQIKADTNFETRQIQVNTSLIER
                     TSCVPFKK"
     gene            complement(1154..1924)
                     /locus_tag="U0308_002960"
     CDS             complement(1154..1924)
                     /locus_tag="U0308_002960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2317904.1"
                     /translation="MSKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGR
                     GPFMLDEIRKELDINSYICYNGQYVIFEGKEIYAKPLPTESLERLITVASEHEHPIVF
                     SGKDSMRANLPDHDRVTIGMDSIKRDYPKVDANYYKGRDIYQCLLFCDESYDAYYREE
                     FKQYGFLRWHDVSVDVCPADGSKAEGIKQMIKKLGFSMEDTYAFGDGLNDIAMLQAVG
                     TGVAMGNGRDEVKAVADYVTDHVDEDGVYKALEHLKLI"
BASE COUNT          685 a          419 c          321 g          636 t
ORIGIN      
        1 tatgctattt tttgttttga tttactaaac atgatatact aaataagata aatttagtaa
       61 acaaggagaa atgaataatg aagctggaag atattgcacg attagcaaac gtttcgaaat
      121 cggccgtttc ccttgcgctg aatggaaaag ctggcgtaag tgaagaaacc cgtttacata
      181 ttctgcaaat tgtcgaggaa aataattacg tcccgttacg taataccaat aaaaaaatga
      241 aaaagaaatc aaccattcgt tttatcgcat gcaaaagtcc taacttgatt accgaacaat
      301 atcagaactt accttttttc agtgagctac ttagctattt atctgctgaa atcgctagtt
      361 acccatatga tttggttatc tctaccttcg atgcaacaac catattagaa gaacttgctg
      421 aagcagaaaa agagcaacca acagcaggcc tgattttact tggcactaat ttaaacgctg
      481 aagaaattaa ccgaatacaa caggaatatc ctaaaatcgt tgtcttagat acacaccatc
      541 cacatatctc agccaacttt gtctctatta ataattttct cggtggatat aaagcagctg
      601 actacctttt acaactagca catacaaaaa ttggttatgt gatgggggta ccacgcatta
      661 aaaattttga tgagcggaaa agtggctttt ttgctcgttt agaagaagcc gatatttcag
      721 tccctgaaca acatgtcttt catttaccag caatgcaaat ccaagaggaa gtttcggtaa
      781 aagaagccat tgctgaattg caagatttac cctctgctct tttttgcgaa aatgattaca
      841 tggctattag catgattaaa atgctacaaa gtctatctat caaagtccct gaacaagttt
      901 ccgtattagg ttttgacaat attaatgaaa gtaaagtaat tacaccagaa ctaaccactg
      961 ttcatgttaa aaaacgtgat attgctgaac aaacacttgc ccttttgtcc aaacaaatta
     1021 aagctgatac gaattttgaa accagacaaa tccaagtgaa tacaagctta atcgaaagaa
     1081 ctagctgtgt tccgttcaaa aaataaccaa aaaagcctgt gctctatttt tgagcacagg
     1141 cttttttgat attttaaatt aattttaaat gttctaaagc tttataaacc ccatcttcat
     1201 ccacatgatc cgtaacatag tcagcgaccg cttttacctc atcacggccg ttgcccattg
     1261 ccacgccagt tccaacagct tgaagcattg caatatcgtt caaaccatcg ccaaatgcgt
     1321 aagtatcttc catcgagaag ccaagttttt tgatcatttg tttaatgcct tccgccttcg
     1381 aaccgtcagc tggacaaaca tccacggaaa catcatgcca gcgcaagaaa ccatactgct
     1441 taaattcttc tcggtaataa gcatcatacg actcatcaca gaaaagtaaa cactgataaa
     1501 tgtcacgacc tttataataa ttagcatcca ctttaggata atctctttta atagaatcca
     1561 ttccgattgt cacccggtcg tgatccggta aattcgcgcg catggaatct tttcctgaaa
     1621 aaacaattgg atgctcatgc tccgatgcaa ccgtgattaa tcgttctaaa gattctgttg
     1681 gtaatggttt agcgtatatt tcttttcctt caaaaataac atattgaccg ttgtagcaaa
     1741 tataagaatt aatatctaat tcttttctga tttcatcaag cataaatgga ccacgaccag
     1801 ttgcaatagc cacataaacg ccattttctt tcaatttagc aatcgcttgc ttcgctgatg
     1861 ctggaatttc tttcgtttct cctacaagtg tcccatctac atcaaaaaat acaattttac
     1921 tcattgatta aacgcctcta tcctctatcc atttttaaat cattatgttt aaattatagc
     1981 agaaaatctc cttgataaca gggttgacaa aattaattat actttctagt agcaattatc
     2041 tggatttatg gtatattaga a
//
LOCUS       DASDYK010000219         2056 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.221, whole genome shotgun sequence.
ACCESSION   DASDYK010000219 DASDYK010000000
VERSION     DASDYK010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.221"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..132
                     /locus_tag="U0308_002961"
     CDS             <1..132
                     /locus_tag="U0308_002961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003723041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2317905.1"
                     /translation="TTANTMYTTFAAGCILIAVPITILFIYLQKYYVEGITSGAVKG"
     gene            147..1844
                     /locus_tag="U0308_002962"
     CDS             147..1844
                     /locus_tag="U0308_002962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003770147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HEM2317906.1"
                     /translation="MEITETKEWWKESVVYQIYPRSFQDSNGDGIGDIRGIIERLPYL
                     KDLGINVIWLCPVYKSPMDDGGYDISDYYEIDPMFGTMSDMDELIEKAEKLGIKILMD
                     LVVNHTSDEHEWFEKAIADPKSKYRDYYIFREGVNGNPPNNWRSYFGGSAWEAVPGEE
                     NMFYLHAFSKKQPDLNWENIVVRNECIQMINWWLEKGLGGFRIDAILNLKKRIEYGTF
                     PADGEDGLVFIGHWILNQPGIEEWLKEIDERTFKKHNAFTVAEADVPEERLSEFIGEN
                     GHFRMVFDFSYTDIDTPETGEWFKNSEWTVKELKEKIITNELVTQRNGWGAKYLENHD
                     QPRSINKYLPQEYQDDRSKKMLGTLFMMLHGTPFIYQGQEIGMSNTRMESIDDYNDIA
                     THDQYHRAILSGMSPEEALEGMYRRSRDNSRTPMQWNNQKNAGFSDSDEIWLKANPNY
                     LDINVEQEQIDDNSVLNFYKKLIHLRSDSSKYKEVAVYGELLPVESSDEVIAYKRKTD
                     DAELLIIVNFSDSENQLCIEGTYEQVLANVALPEMVENVLEIPAYTGAVFSRVLEVD"
     gene            1845..>2056
                     /locus_tag="U0308_002963"
     CDS             1845..>2056
                     /locus_tag="U0308_002963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose phosphorylase"
                     /protein_id="HEM2317907.1"
                     /translation="MQIKNKAMLITYSDSLGKNMEELSKVMETYFEDAVGGIHLLPFF
                     PSTGDRGFAPSDYTTVDSDLGSWEII"
BASE COUNT          696 a          283 c          475 g          602 t
ORIGIN      
        1 acaacggcaa atacaatgta tacaacgttt gcggctggct gtatattgat tgcggtacca
       61 attacaatac tgtttattta tttgcaaaaa tattatgttg aaggcattac aagtggtgct
      121 gttaaaggat aggagataga ttaatagtgg aaataacaga aacgaaagaa tggtggaaag
      181 aatcggtagt gtaccaaatc tatccgcgta gttttcaaga ttcaaatggg gatggtattg
      241 gagatattag aggaattata gaacgacttc cttatttgaa agatttaggt attaatgtga
      301 tttggctttg tcctgtctat aaatcaccta tggatgatgg tggttatgac atttctgatt
      361 actatgagat tgatccaatg tttggaacga tgagtgatat ggatgaatta attgagaagg
      421 cagaaaaatt aggaataaaa atattgatgg atttggtggt aaaccataca tctgatgaac
      481 atgaatggtt tgaaaaagca atagctgacc caaaaagtaa atatcgagat tattatattt
      541 tccgagaggg tgtaaatgga aacccgccta ataattggcg ttcttatttt gggggatctg
      601 cgtgggaagc cgtaccaggt gaggaaaaca tgttttacct acatgctttt tctaaaaaac
      661 agccagattt aaactgggaa aacattgtag tgcgtaatga atgtatccaa atgattaact
      721 ggtggcttga aaaaggttta ggtggcttta gaattgatgc cattttaaat ttgaagaaaa
      781 gaattgagta cggtactttc ccagcggacg gggaagatgg cttggttttc atcggtcatt
      841 ggattttaaa tcagccggga attgaagagt ggctcaagga gattgacgaa cggacattta
      901 aaaaacataa tgcatttact gtggctgagg cggatgtgcc tgaagaaaga ctttctgaat
      961 ttataggtga aaatggtcat ttccgtatgg tgtttgattt tagctataca gatattgata
     1021 ctcctgaaac aggcgaatgg ttcaagaatt cagaatggac agtaaaagaa ttaaaagaga
     1081 aaataattac caatgaactg gtgacacagc gaaatggttg gggggcaaaa tacttagaaa
     1141 atcatgatca accgcgttcg ataaataagt atttacctca agaataccaa gatgatcgta
     1201 gcaaaaaaat gctaggcacg ttatttatga tgttgcacgg tacgccgttc atttatcaag
     1261 gacaagagat tggtatgagt aatactcgga tggaaagtat agatgattat aacgatattg
     1321 cgacgcacga tcaataccat cgcgcaattc tctctggaat gagtccggaa gaagcgcttg
     1381 aaggaatgta tcggcgtagt agggataatt caagaacacc gatgcaatgg aataatcaaa
     1441 agaacgctgg tttttccgac tcagatgaaa tttggttgaa agcaaaccct aattaccttg
     1501 atattaacgt agagcaggaa caaatcgatg ataattccgt attgaatttt tataagaaat
     1561 taatccattt aagaagtgat tctagtaaat ataaagaagt ggctgtttat ggagaattac
     1621 tgccagtaga atcaagtgat gaagttattg cttacaaacg taaaacagat gacgctgagc
     1681 tcttaatcat cgtgaatttt tctgattctg aaaatcaatt atgcattgaa ggtacttatg
     1741 aacaggtact tgctaatgta gcgttgccag aaatggtaga aaatgtcctt gaaatacctg
     1801 catatacagg tgccgtcttc tcaagggttt tggaggtaga ctgattgcaa attaaaaata
     1861 aagctatgtt aattacttat tctgatagtt tagggaaaaa tatggaagaa ttatccaagg
     1921 tgatggaaac ttattttgaa gatgctgttg gcgggattca cttattgccg ttctttccat
     1981 ccactggaga tcgagggttt gcgccaagtg attacacaac agtagatagc gacctaggtt
     2041 cttgggaaat aatcga
//
LOCUS       DASDYK010000220         2021 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.222, whole genome shotgun sequence.
ACCESSION   DASDYK010000220 DASDYK010000000
VERSION     DASDYK010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2021
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.222"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..297)
                     /locus_tag="U0308_002964"
     CDS             complement(<1..297)
                     /locus_tag="U0308_002964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEM2317908.1"
                     /translation="MKKLVVSAAPIEKRIAAMEDDLLIDIEIVRPSEKVQVGDIYYGF
                     IQKIDRKVEAAFVDLGNNNKGFIHLKDIPESYDKTQGAKIPVQIVREGSATKLPL"
     gene            complement(350..1150)
                     /gene="minD"
                     /locus_tag="U0308_002965"
     CDS             complement(350..1150)
                     /gene="minD"
                     /locus_tag="U0308_002965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEM2317909.1"
                     /translation="MGEAIVITSGKGGVGKTTSTANLGTALALQGKKVCLIDMDIGLR
                     NLDVVLGLENRIIYDLVDVVEGRCKIHQAMIKDKRFDDLLFLLPAAQTTDKNAVSGEQ
                     MVDLINQLRPDYDFILIDCPAGIETGYKNAVAGADKAIVVTTPEISAVRDADRIIGLL
                     EKEDIEPPKLIINRIRTQMMMNGDVMDIDEITTHLSIELLGIIIDDDEVIRSSNSGDP
                     VAMLPNNRASQGYRNIARRILGESIPLMSIETKKAGFFARLKQLFSGK"
     gene            complement(1153..1830)
                     /gene="minC"
                     /locus_tag="U0308_002966"
     CDS             complement(1153..1830)
                     /gene="minC"
                     /locus_tag="U0308_002966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEM2317910.1"
                     /translation="MKKNVQIKGTKDGISIFLSDKASISELQQELTQLLADQKQNPYS
                     GEKLEVQVQIGNRLFSEEEEREISTIIHENSQMKISAFYSNVMSKDEAKKWKENDQIF
                     SMATIIRSGQVVQVPGDFLLIGDVNPGGQIRSNGNVFVLGNIKGIIHAGFEGNGNAIV
                     AGKFLYPSQVRIADKVYGFDSEDYKEVTETDLFSAFVNDAGEIVIDGIHKIRKIRPEI
                     SNFQGGR"
BASE COUNT          632 a          428 c          273 g          688 t
ORIGIN      
        1 taacggaagt ttcgtcgcgc tgccttcccg cacaatttga actggaattt tagcaccttg
       61 cgttttatca tagctttccg gaatatcttt taaatggatg aaacctttgt tattattacc
      121 taaatcaaca aaagctgctt ccacttttcg atcgattttt tgaataaatc cataataaat
      181 atcaccaact tgaacttttt cagaaggtcg tacaatttca atatctatta acaaatcatc
      241 ttccattgct gctattcgtt tttctatagg agccgcactt actactagct ttttcataca
      301 atcacctttt ataaagaccc ttcatcttaa agataaaggg tctaattttt tatttcccgc
      361 taaaaagttg ctttaagcga gcgaaaaatc ccgctttttt tgtttcaatc gacattaaag
      421 ggatagattc tccaagaata cgtcgagcaa tattacgata accttgtgaa gcacggttat
      481 ttggtaacat agcgacagga tccccactgt tcgaagagcg aataacttca tcatcatcaa
      541 tgataatacc aagtaattca attgataaat gtgtggtaat ttcatcaata tccattacat
      601 caccattcat catcatttgt gtacgaatac ggttaataat taattttggt ggctcaatat
      661 cttctttttc cagtaaaccg ataattctat ctgcatcacg aactgctgat atttctggcg
      721 ttgtaactac aattgctttg tctgcaccag caacggcatt tttatagcca gtttcaattc
      781 ctgcaggaca atcaattaaa ataaaatcat agtctgggcg gagttgatta attaaatcca
      841 ccatttgttc acccgaaaca gcatttttat cagtagtttg cgccgctgga agcaagaaaa
      901 gtaaatcatc aaaacgttta tctttaatca ttgcttgatg aattttacag cgaccttcta
      961 ccacatctac taaatcataa ataattcgat tttcaagacc taaaacaaca tctaaattgc
     1021 gaaggccgat atccatatca atcaagcaca ctttcttacc ttgaagagca agtgccgttc
     1081 ccaagttagc agttgaagta gtttttccta ctccaccttt cccagaagta atgactatag
     1141 cttctcccat gtttaacgcc ctccttgaaa attagaaatt tcaggtctaa tttttcttat
     1201 cttatgtatt ccatcaatta ctatctcacc tgcatcattt acaaatgcag aaaacaaatc
     1261 tgtttcagtg acctctttat aatcctcact atcaaatccg tataccttat cggcaattct
     1321 aacttgtgag ggataaagaa attttcctgc tacaatagca tttccgttgc cttcaaagcc
     1381 agcatgaata attcctttaa tattccctag aacaaataca ttgccatttg aacggatttg
     1441 tcccccagga ttaacatcgc caatcagcaa aaaatcccct ggaacctgaa caacttgtcc
     1501 agaacgaata atcgttgcca tagaaaaaat ttgatcattt tctttccatt ttttggcctc
     1561 gtctttagac atcacattac tataaaatgc actaattttc atttggctat tctcatgaat
     1621 aatagttgat atttcacgtt cttcttcctc tgaaaacaga cggttaccaa tttgaacttg
     1681 cacctctaat ttttcaccag agtatgggtt ttgtttctga tctgcaagca attgagttag
     1741 ttcttgttgc aattcagata tactcgcttt atcactaaga aaaatactaa tgccatcttt
     1801 tgtgccttta atttgaacat tcttcttcat ataccatttc accccgcaac atttatactc
     1861 tagcctttag tatacactaa ctcaaattaa atgataataa aaaaatactt tttttgaaaa
     1921 aacagcttga aatcgcaaac tgtggatatt ctccacagtc atactttttc aagtaatagc
     1981 gacttcaaac tgttaaaatt acgatagtta ttctgattta a
//
LOCUS       DASDYK010000221         1963 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.224, whole genome shotgun sequence.
ACCESSION   DASDYK010000221 DASDYK010000000
VERSION     DASDYK010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1963
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.224"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            203..1879
                     /locus_tag="U0308_002967"
     CDS             203..1879
                     /locus_tag="U0308_002967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2317911.1"
                     /translation="MKKSKLFLTLGLTLLLSLVLVACGGGSDSKSDKKGSDSGKASGE
                     QVLNLTESALIPSADSTKADDQVGLNVVNQTNEGLYALDKDGIPAIAGAAEEPKVSDD
                     KTVYTIKLREDAKWSNGDPVTANDYVYSWRRAVDPNTAATYSYLFDAIKNGGDIVAGK
                     KKPEELGIKAVDDYTLEVTLSKPTAYINSLFAFPTFFPLNEKFVTEKGEKYAQNSDNM
                     LFNGPFELKDWTGTNKKWTYVKNDKYWDKDKVKLKQINVQVVQDSGTGLNLYNTDKVD
                     RTVLSADYAAQNKNNKDYVTVNDSSTFYIKFNQKRAGKDTVFANKNIRKAIALAIDKQ
                     SYTDTVLKNGSKPANNLVPEGFTFDPGNKEDYTKESGKHLEYDVKEAQKAWKAGLKEL
                     GVNEITVEFTSDDTENARKSSEFIQDQLQKNLDGLTVKLKNVPFKVRLQNDQNQDYDF
                     SMSGWGPDYQDPSTFLDLFVTDGAQNRMSYSNKDYDKILNDASVTYAADDQKRWDEMV
                     KAEKILLTDDVAIQPLYQRSTAYLQKDYIKNLQKNPFGPDYTYKETYLTK"
BASE COUNT          727 a          350 c          338 g          548 t
ORIGIN      
        1 ttattgcaaa atagaggatt gcgtaacact ttctgttcag agttttcacg caatttcaat
       61 tttgccttaa tattttaata acttgtatct ttcatccttg ttttcattta tcttgtaaaa
      121 ataatttaca aagccagaat tcttagagta taataggtat cgaaacaatt tttcagaaaa
      181 ataaaaaagg gaggtctact tagtgaaaaa atctaaatta tttcttacac ttggattaac
      241 actattacta agcttagtct tggtagcatg cggaggcgga tcagattcca aatccgacaa
      301 aaaaggctca gattcaggaa aagcttcagg agagcaagta cttaacttga cagaaagcgc
      361 actaattcct tctgcagaca gcacaaaagc ggatgaccaa gttggtttga acgttgtaaa
      421 ccaaacaaac gaaggtctat atgcgcttga caaagatggt attcctgcca ttgccggtgc
      481 tgctgaagag ccaaaagtta gcgatgacaa aacagtttat acaatcaaac ttcgtgaaga
      541 tgcaaaatgg tcaaacggag accctgtaac tgcaaatgac tatgtttact catggcgtcg
      601 tgcagttgac cctaacactg ctgcaacata ttcttaccta tttgatgcaa tcaaaaacgg
      661 tggagatatc gtagctggca agaaaaaacc tgaagaatta ggaattaaag cagtagatga
      721 ttatacttta gaagttactc tatctaaacc aactgcttac attaactcac tattcgcatt
      781 cccgactttc ttcccactta acgaaaaatt cgttacggaa aaaggcgaaa aatatgcaca
      841 aaatagtgat aacatgttat tcaatggacc tttcgagttg aaagactgga ctggaacaaa
      901 caaaaaatgg acttacgtaa aaaatgataa atattgggat aaagataaag ttaagttgaa
      961 acaaatcaac gtacaagttg ttcaagactc cggtactgga cttaacttat acaacactga
     1021 caaagttgac cgtactgtat tgagtgcaga ctatgctgct caaaacaaaa acaataaaga
     1081 ctatgtaaca gtgaatgatt cttctacttt ctacattaaa tttaaccaaa aacgtgctgg
     1141 caaagataca gtatttgcta acaaaaacat ccgtaaagct atagctcttg cgattgacaa
     1201 acaatcgtat actgatacag ttcttaaaaa cggatctaaa cctgcaaaca accttgtacc
     1261 agaaggtttc acttttgacc caggtaacaa agaagattat acaaaagaat ctggcaaaca
     1321 tttagaatat gatgtaaaag aagctcaaaa agcttggaaa gctggtttga aagaattagg
     1381 agttaacgaa attacagttg aattcactag tgatgacact gaaaatgcga gaaaatcttc
     1441 tgaattcatt caagaccaac tacaaaagaa cttagacggt cttacagtta aacttaaaaa
     1501 cgtaccattt aaagttcgtt tacaaaatga ccaaaaccaa gattacgatt tctctatgag
     1561 cggctggggt cctgactatc aagatccatc cactttctta gatctattcg taactgatgg
     1621 tgcacaaaac agaatgagtt attctaacaa agactacgac aagattttaa atgatgcttc
     1681 tgtaacttat gcagctgacg atcaaaaacg ttgggatgaa atggttaaag cagaaaaaat
     1741 tcttcttacg gatgatgtag ctattcaacc actttatcaa cgttctactg catacctaca
     1801 aaaagactac attaaaaact tgcaaaaaaa tccatttggt ccagattaca cttacaaaga
     1861 aacatacttg actaaataaa atattagtct ttaagaaatg cttgacggaa agagagagta
     1921 tatttcgata tgctctctcc ttttgctgat gattttcatg tgt
//
LOCUS       DASDYK010000222         1942 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.225, whole genome shotgun sequence.
ACCESSION   DASDYK010000222 DASDYK010000000
VERSION     DASDYK010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1942
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.225"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(82..684)
                     /locus_tag="U0308_002968"
     CDS             complement(82..684)
                     /locus_tag="U0308_002968"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317912.1"
                     /translation="MKKTLIVLLSVLIATISISFSVTLWQERTKINEKMKEYKSDNLN
                     KQKTIEQYRIKELKNSQKQNNQTEESFDDELTEVLINNKELINELYTYTSTETRLENI
                     KPYLTKDQYQKMFKTSADGHQEKIVSKLDSLNVYVLERKGQSIRTIVNEVTSATEINK
                     TTMKQRIYVKISYEIQKGKWKAKEILFTAIPSQDLKMGES"
     gene            complement(703..1779)
                     /locus_tag="U0308_002969"
     CDS             complement(703..1779)
                     /locus_tag="U0308_002969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003732303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEM2317913.1"
                     /translation="MASEGHDSGNKTSWGLLFLRIFSVKVIIIIFIVFILISLIGLLL
                     AGRSAQQETSNIGNGCSITGKLDENLFNATLENAGVFKGKGDKFISIAKKQNIDPVLF
                     AAIAMSETGWGKSDAVVHKNNPGGLMDAATGMATVKTFATLDEGLEAMGVTLHNRIIN
                     DGLNTIEKLGAIYAPIGASNDPTGLNQNWVFTVTSIAQKFGGLTMNCSNTGSSGGTGK
                     YIIPVKNPVVSSGFSIRINPVTGVQESHKGLDFAQPAGSEILAADDGVVVFSGLGVSG
                     SGYGGYGNVVHLEHGKNKEWTLYGHMIRTNVSVGQHVKQGDVIGYVGSTGQSTGNHLH
                     FEIRKEKMGSQVDPAPILGLISTN"
     gene            complement(1780..>1942)
                     /locus_tag="U0308_002970"
     CDS             complement(1780..>1942)
                     /locus_tag="U0308_002970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317914.1"
                     /translation="KLKSVMEETFTQNEYEIITALDKGQALYYDREHKMLLDIEASDE
                     QLARYKGGA"
BASE COUNT          570 a          391 c          251 g          730 t
ORIGIN      
        1 acgattttgt agttaaacag aacaaaataa ccaatacaaa accagcgact gtaccaatta
       61 atttcttttg ttgcttactc atcaggattc ccccattttt aaatcttgtg atggtattgc
      121 cgtgaaaaga atttctttag ctttccactt tcccttttgt atttcataac taatctttac
      181 ataaatacgt tgtttcattg tcgttttatt aatctcagtt gcgcttgtta cttcattaac
      241 gattgttctt atcgattgac cttttcgttc taatacataa acatttaaac tatccaattt
      301 gcttacaatt ttttcttgat gtccatcagc tgatgtctta aacatcttct ggtattgatc
      361 ttttgttaaa taaggtttaa tattctctaa tcttgtttca gtacttgtat aagtataaag
      421 ttcattgatt aattctttgt tattaatcag tacttctgtt aattcatcat caaaagattc
      481 ttcagtttgg ttattttgtt tttgagaatt ctttaattct tttattcgat actgctctat
      541 agttttttgt ttatttaaat tatcactttt atattctttc attttctcat ttatttttgt
      601 cctttcttgc cataaagtaa cagaaaacga gatagatatt gtggctatta aaacacttaa
      661 taatactatt aaagttttct tcatagtaga acccctcttc ttttaatttg ttgagataag
      721 acctagaatt ggtgctggat caacttgact acccattttt tcctttcgaa tttcaaaatg
      781 cagatggttc cctgtactct gtccagtact tccaacataa ccaattacat caccttgttt
      841 tacatgctga cctacactaa catttgtacg aatcatatga ccatagagag tccattcttt
      901 atttttacca tgttctagat gaacaacgtt accataacca ccgtagccac ttcctgaaac
      961 acccagacca gaaaatacga caaccccatc atcagctgca agtatttctg atccagctgg
     1021 ttgtgcaaaa tctaatcctt tatgactctc ttgaactccc gtcacaggat taatacgaat
     1081 agaaaatcca gaacttacaa ctggattttt aacagggatt atatattttc cagtcccccc
     1141 actcgaacca gtgttagaac aattcatagt aagccctcca aatttttgtg caatagatgt
     1201 aacagtaaat acccagtttt ggtttaatcc tgtagggtca ttacttgctc caataggggc
     1261 gtatattgcc cctaattttt caattgtatt gagtccatca ttaataattc tattatgaag
     1321 ggtaacaccc attgcctcta atccttcgtc taaagtagca aacgttttaa cagtagccat
     1381 tcctgtggct gcatccatta gacctcctgg attattttta tgcactacag catcactttt
     1441 accccatcca gtttcactca tagctatagc tgcaaaaaga actggatcaa tattttgttt
     1501 ctttgcaatt gaaataaatt tatctccttt tcctttaaat actcctgcat tttctaatgt
     1561 ggcgttgaaa agattttcat ccaacttgcc tgttatcgag caaccattac caatatttga
     1621 agtttcttgt tgagctgacc ttcctgcaag taaaagtcca atcaagctta ttaaaatgaa
     1681 tacaataaaa ataataataa tcactttaac actaaatata cgcaaaaaaa gcaagcccca
     1741 ggaagtttta ttgccggaat catgtccttc acttgccatt tacgcaccac ctttatatct
     1801 tgctaattgt tcatcagaag cttcaatgtc aagcaacatt ttatgttcac gatcataata
     1861 tagtgcttgt cctttatcta aagctgttat aatttcgtat tcattttgag taaaagtttc
     1921 ttccatgaca ctttttagtt tt
//
LOCUS       DASDYK010000223         1923 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.226, whole genome shotgun sequence.
ACCESSION   DASDYK010000223 DASDYK010000000
VERSION     DASDYK010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1923
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.226"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1837
                     /locus_tag="U0308_002971"
     CDS             <1..1837
                     /locus_tag="U0308_002971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2317915.1"
                     /translation="FKKFTNLKSLESLDVTWNNITDLSSLTANDHITNLNLSYNKFTN
                     IAPIATMKELKVLYLNNNNLTSIDSLNTLRGLTIAYADNNNITDLSNLKDFFEGMDVV
                     GDYKGLQVNNQTITLPTINIKEGGTAISNNPTLDIDGEKMPVSSISDGGTVSTDNKTV
                     SFTNLPVGNKTVTYKATFTATSTKGVPLSYSIKVSQPINVSAQSDSTVNVFYKDENGD
                     ELAPSETISGKSGENYQTIEKTITNYTLKEIEGQPSGQFGDSDATVTYVYEKADGAPV
                     IVKYVDADGNELATSDTLNGKIDAPYQSTAKSITGWAVKTTPTNATGVFTNANQTVTY
                     VYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAKSLSGWAVKTTPANATGV
                     FTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAKSLSGWTV
                     KTTPANATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATPDTLNGKLDTSYAA
                     TAKNLSGWKLTATPANANGVFTTDAQTVTFVYAKQEDNPKKEDKNKTPIKISENKPTA
                     SKVTRIKKQTKLPKTGDNQQDSILFGLIGTCFVLLGIYSISKKNS"
BASE COUNT          699 a          404 c          326 g          494 t
ORIGIN      
        1 atttaaaaaa tttacaaacc ttaaatcact cgaaagttta gatgtaactt ggaataacat
       61 taccgactta tcatcattaa ctgcaaatga tcatattaca aacttaaatc taagttacaa
      121 taagttcact aatatagctc caattgctac aatgaaagaa cttaaagtcc tttatttaaa
      181 caataacaac ctaacttcca ttgattcttt aaatacacta agaggattaa ctatagccta
      241 tgctgataat aataacatta ctgatttgag taatttaaaa gacttttttg aaggcatgga
      301 tgtcgttgga gattataaag gtttacaagt taacaaccaa actatcacac ttccaactat
      361 taatatcaaa gaaggtggaa cagctatttc aaataaccct actttagata ttgatggcga
      421 aaaaatgcct gtttctagca tttctgatgg cggaacagta tctaccgata ataaaaccgt
      481 ttcttttact aacttaccag ttggaaataa gactgttact tataaagcaa cattcacagc
      541 tacctccact aaaggagtac cacttagtta ttctattaaa gtatcgcaac caattaatgt
      601 atctgcacaa tccgattcaa cagtaaacgt attttacaaa gatgaaaatg gcgatgaatt
      661 agctccaagt gaaacaattt ctggtaaatc cggagaaaat tatcaaacaa tagaaaaaac
      721 aattactaac tacacattaa aagaaattga aggccagcct tcaggacaat ttggcgatag
      781 tgatgcaaca gtcacttacg tttacgaaaa agcggacggc gctcctgtta tcgtgaaata
      841 tgtcgacgcg gatggtaacg aattagctac ttccgacaca ctgaacggca aaattgatgc
      901 tccttatcaa tctacagcca aaagcatcac tggttgggca gtcaaaacga ctccaaccaa
      961 cgcaacgggc gtattcacaa acgctaacca aacggtcact tatgtctatg aaaaagcaga
     1021 cggcgctcct gttaccgtga aatatgtcga cgcggatggc aacgaattag ctacttccga
     1081 cacactgaac ggcaaaattg atgctcctta tcaaactacc gctaaaagtc tttctggttg
     1141 ggcagtcaaa acgactcctg ccaacgcaac gggcgtattc acaaacgcta accaaacggt
     1201 cacttatgtc tatgaaaaag cggacggcgc tcctgttacc gtgaaatatg tcgacgcgga
     1261 tggcaacgaa ttagctactt ccgacacact gaacggcaaa attgatgctc cttatcaaac
     1321 taccgctaaa agtctttctg gttggacagt caaaacgact cctgccaacg caacgggcgt
     1381 attcacaaac gctaaccaaa cggtcactta tgtgtatgaa aaagcggacg gcgctcctgt
     1441 taccgtgaaa tacgtcgacg cggacggcaa cgaattagct actccagata cattgaacgg
     1501 taagctagat acatcttacg cggcaacagc taaaaacttg agtggttgga agctaacagc
     1561 cacaccagcc aacgctaatg gcgtatttac aactgatgct caaacagtca cctttgtata
     1621 tgctaaacaa gaagacaatc ctaaaaaaga ggataaaaac aaaacaccta ttaaaatcag
     1681 cgaaaacaaa ccaacagcaa gcaaagtaac tagaatcaaa aaacaaacaa aattaccgaa
     1741 aactggtgat aatcaacaag atagtatatt gtttggatta attggtacat gtttcgttct
     1801 cttaggaatt tactctatct ctaagaaaaa cagctaaaat aaatagctaa aactctctta
     1861 tcaattggat aagagagttt ttgtttggta attacttcat attgcactac ttccaacctc
     1921 aga
//
LOCUS       DASDYK010000224         1916 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.227, whole genome shotgun sequence.
ACCESSION   DASDYK010000224 DASDYK010000000
VERSION     DASDYK010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1916)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1916)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.227"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..838)
                     /locus_tag="U0308_002972"
     CDS             complement(<1..838)
                     /locus_tag="U0308_002972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEM2317916.1"
                     /translation="MKKISMRERFALDPRVIKVLISITIAVILFPIMGDWIVYPTYVF
                     NAIYITAQMSKGDTYKSSIERIIGTIVGGLLAAFVYLLVPNHHYIMIPIGAALAVMLS
                     YLFTKKFTMVIVVITVMVLVGKGDGEPIVFLRDRLFDTMIGLVIGFVVYALYPRKKNK
                     KLNQVFISQEKAVLEKIKEIDINSEDAKSLAPKIKGLWKQLIDLRKTREQIITDSSFV
                     ASLTSDEPMLHFTHLVEQAINNIEILYHVTLEKESEPNYEVVFAYHQQACAKVITEMD
                     ALI"
     gene            complement(835..1755)
                     /locus_tag="U0308_002973"
     CDS             complement(835..1755)
                     /locus_tag="U0308_002973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317917.1"
                     /translation="MKKFLLDKIGARGLIQMLQAFIYASICVVVHTVIFPDLAGVLPI
                     VVLIGIISMQPTYGITRKVIPQIALAFTLACIFVIISTYFFPINVYIYYVVMIVVILA
                     VNFLMPQKYMVMTLAIGTALYFLGTDDLPMPLYTMIIVALMDVFVFFLLVQLVVKYVH
                     LPLEKTVQTIMKQLVGLFDKEIESVFKNNGKFIAKPLYSIFVQSQMFIKEYSASKKAN
                     PRHVELYQALLPNYLQLFFHMQTMEDIGRVGLSEEAKQALAQINMKVSDEINAKEANP
                     VASFHVKKFVENFLAIKVGMKELVEGREQK"
BASE COUNT          630 a          381 c          290 g          615 t
ORIGIN      
        1 taataagtgc atccatctct gtaattactt tcgcgcatgc ttgttggtga taagcaaata
       61 caacttcata attaggttca gactcttttt caagcgtcac atgatataaa atttcaatat
      121 tattaattgc ttgctctact aaatgagtaa aatgaagcat tggttcatca gaagtcaaac
      181 tcgcaacaaa actgctatct gtaataattt gttcgcgtgt ttttcttaaa tctatcaact
      241 gtttccacaa accttttatt ttgggagcta gagattttgc atcttcgcta tttatatcaa
      301 tttcttttat tttttctaaa actgcctttt cctgagaaat aaacacttga tttaattttt
      361 tgtttttctt gcgtgggtaa agcgcataga caacaaaacc gatcacaaga ccaatcatcg
      421 tatcaaatag tcggtctctt aaaaagacta tcggctctcc gtcgcctttt ccgacaagta
      481 ccattactgt aataacaaca ataaccatcg tgaatttttt agtaaataga tagcttagca
      541 taactgcaag tgctgcgcca atcggaatca taatataatg atggttggga actagcaagt
      601 atacaaaggc tgcaagcagt ccacctacaa tagtaccgat aatccgctca atgcttgatt
      661 tatatgtatc ccccttactc atttgtgcgg taatataaat agcattaaat acgtatgttg
      721 gatacacaat ccaatcaccc ataataggga ataaaatcac tgctatcgta atactaataa
      781 gcactttaat aactcgtgga tcaagagcga aacgttctct catagaaatc tttttcattt
      841 ctgctctctc ccttccacta attctttcat tccaacctta atagctagga agttctcaac
      901 aaattttttc acgtgaaatg aggcaactgg attggcttct ttcgcgttaa tttcatcaga
      961 aactttcatg ttaatctgag caagggcctg tttcgcttct tccgacaaac caactcgtcc
     1021 aatgtcctcc attgtttgca tatgaaaaaa aagttgaaga taattaggca gtaacgcttg
     1081 atacagctcc acatgacgag gattcgcttt tttactagca ctatattctt taataaacat
     1141 ttgtgactga acaaaaatac tatacaatgg ttttgctata aatttaccat tatttttaaa
     1201 tacactttca atttccttgt caaatagtcc taccaattgt ttcataatag tttgaacggt
     1261 tttttcgagt ggtaaatgta catattttac gactaactgc accagtaaaa agaacacaaa
     1321 cacatccatt aacgcgacaa ttatcatggt atagagaggc attggcaaat catctgttcc
     1381 aagaaagtaa agtgctgtcc caatcgcgag tgtcattacc atatatttct gcggcatcaa
     1441 gaaattcacc gccaaaataa caactatcat gacaacatag taaatataca cattgattgg
     1501 gaaaaaatag gtgcttataa tgacaaaaat acacgctaga gtgaatgcta gcgctatttg
     1561 gggaatgact tttctggtaa ttccatatgt aggttgcatt gaaataatcc ctattagtac
     1621 cactataggt aaaaccccgg ccaaatcagg aaaaataact gtatggacca ctacacaaat
     1681 gctcgcataa ataaatgctt gcaacatctg aataagtcct cgagcgccga ttttatcaag
     1741 caaaaatttc ttcatctgtt ccccctcctt ctgtcccttt atgtgaagct ctgtaactat
     1801 aatagaaaat aactggctag atagcaagcg gtaattcgca aacaataaaa aaacctaaga
     1861 atatactaga catgttgaca tatctcttta tattacatag gttttctttt tattga
//
LOCUS       DASDYK010000225         1911 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.228, whole genome shotgun sequence.
ACCESSION   DASDYK010000225 DASDYK010000000
VERSION     DASDYK010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.228"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..847
                     /gene="mltG"
                     /locus_tag="U0308_002974"
     CDS             <1..847
                     /gene="mltG"
                     /locus_tag="U0308_002974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEM2317918.1"
                     /translation="SFYVKYNNDTNLKAGNYEFSPSMNTDQIVKKMQEGKTVAPAKLV
                     IPEGYTLDQIADRIVAYQPKLKKADVLKTMDDPEFVASMIKAYPDTVTNDVLNKSIKH
                     PLEGYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYRDELTKQKMSVHKFLTMSSI
                     IEKEATENVDRKMIASVFYNRLAKDMRLQTDPTVLYALGEHKSKTTYKDLEVDSPYNT
                     YKNNGLPPGPISNSGDSSMEAALYPEKSDYLYFLANTKTGKVYFSKTLEEHNKLKEEH
                     ITKNN"
     gene            923..1576
                     /locus_tag="U0308_002975"
     CDS             923..1576
                     /locus_tag="U0308_002975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HEM2317919.1"
                     /translation="MNDIIHDYLLKNIPKSSPFFEELEAYAKENEVPIMEPDSLYCLL
                     QILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYGAND
                     RVKVLLTDAIEGAEEILAHGPFDAIFIDAAKAQYEKFFHIYTDSLAENGVIYSDNVLF
                     KGLALDMTPEKQRKLRVARKMRHFNDFLVTHPDFETTTIPLGDGLSISKRKKTGGVS"
     gene            1573..>1911
                     /locus_tag="U0308_002976"
     CDS             1573..>1911
                     /locus_tag="U0308_002976"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465022.1"
                     /note="functions in pyrimidine salvage; pyrimidine
                     ribonucleoside kinase; phosphorylates nucleosides or
                     dinucleosides to make UMP or CMP using ATP or GTP as the
                     donor; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HEM2317920.1"
                     /translation="MTKKPIVVGVTGGSGSGKTSVTKAICDHFSGHSILMIAQDVYYH
                     DQANISFEDRLKVNYDHPLAFDTDLLISHIAALRRYETIEKPIYDYAKYTRKKEVEIQ
                     EPREVIILEGI"
BASE COUNT          696 a          332 c          361 g          522 t
ORIGIN      
        1 ctcgttttat gtaaaatata ataatgatac gaatttaaaa gcagggaact atgaattcag
       61 tccgtcgatg aacacagatc aaatcgtcaa aaaaatgcaa gaaggaaaaa cggtagcacc
      121 tgctaaactg gtcattccag aaggttacac gttagaccaa attgctgata gaattgttgc
      181 ttatcaacca aaactaaaaa aagcagatgt acttaaaaca atggacgatc ctgaatttgt
      241 tgcttccatg attaaagcat atccagatac agtaacaaac gacgtattaa acaaatctat
      301 taaacatcca ttagaaggtt atttataccc agctacttac accttcaaag gaacggatgt
      361 atctgcagaa caaattatta cagagatggt caaggcaacg gatgtgaaca ttgctaagta
      421 ccgcgatgaa ctaacgaaac aaaaaatgtc tgtacacaaa ttcttaacga tgtcttccat
      481 tatcgaaaaa gaagcaactg aaaacgtaga tcgcaaaatg attgccagcg tattttataa
      541 tcgtttagca aaagatatgc gattgcagac agacccaact gttctttatg cgcttggtga
      601 acacaaaagt aaaacgactt acaaagattt agaagtcgat tcaccataca acacatacaa
      661 aaacaatgga ctaccaccag gtccaatttc aaatagtgga gactcttcga tggaagcagc
      721 actttatcca gaaaaaagtg attacctata cttcttagca aatacaaaaa ctggtaaagt
      781 atacttctct aaaactttag aagagcacaa taaactaaaa gaagagcata ttacgaaaaa
      841 taattaaaac aaccacttgt cagaagcatg tttagcatgt ttttggcagg tgctttgttt
      901 gttaagatag gggatcctag cagtgaatga tattattcat gattatttat taaaaaacat
      961 tcctaagagc agtccttttt ttgaagaatt agaggcgtat gcgaaggaaa atgaagtacc
     1021 gattatggaa ccagattctt tgtactgctt attacagatt ttagatatcc aaaaaccaaa
     1081 gcgcatattg gagcttggga cggccattgg gtactccgct ttaaaaatgg cagataaact
     1141 tcctgatgca gagattatca cggttgagcg cgacgaagaa cgatatgagc aagcaataca
     1201 taatattcag cgctacgggg ctaatgacag agtgaaagtt ttattaacag atgctattga
     1261 aggggctgaa gaaattttgg ctcacggtcc atttgacgca atatttattg atgcagccaa
     1321 agcgcaatat gagaaatttt tccatattta taccgattct ttagctgaaa atggcgttat
     1381 ttatagtgat aatgttcttt ttaaagggtt agcgctagat atgacaccag aaaaacaacg
     1441 caaattacgt gttgctagga aaatgcgcca ttttaacgat tttttagtga cgcatcctga
     1501 ttttgaaaca acgaccattc cactagggga cggcctatct atttccaaaa gaaagaaaac
     1561 tggaggcgta tcatgacaaa aaaaccaatc gtagtcggcg taactggcgg ttcaggttct
     1621 ggtaaaacta gtgtaacgaa agccatttgt gatcatttta gcggacactc gattttgatg
     1681 attgctcaag atgtctatta tcacgatcaa gccaatatta gttttgaaga tagattaaaa
     1741 gtaaattatg atcatccact agcttttgat acggacttac tcatttcaca tattgccgca
     1801 ctgcgtcgct atgaaaccat agaaaagccg atttatgatt atgccaaata tacgcgaaaa
     1861 aaagaagtag aaatccaaga acctagagag gttattattt tagaaggaat t
//
LOCUS       DASDYK010000226         1892 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.229, whole genome shotgun sequence.
ACCESSION   DASDYK010000226 DASDYK010000000
VERSION     DASDYK010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.229"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            27..947
                     /gene="mogR"
                     /locus_tag="U0308_002977"
     CDS             27..947
                     /gene="mogR"
                     /locus_tag="U0308_002977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility genes transcriptional repressor MogR"
                     /protein_id="HEM2317921.1"
                     /translation="MPKSEIRKLLQEIKKQVDNPGNSSTTEIKKMASEAGIDEKTAEE
                     IYHLLTEFYQAVEEHGGIEKYMHSNISWLKIELELLSACYQIAILEDMKVLDISEMLS
                     LNDLRIFPKTPSQLQNTYYKLKKELIQVEDIPKNKPGRKRKTQKNTKKEKTNIFGKVV
                     PAEFKAPTSIKEQISYDKSREKNLVDLLSGVKSNVQLLSENQGEENNVYDLLKSIYSL
                     SSLAVQKEELDKKYQDLQTKCQELEQENSYLKQQNETMTDSFHTLVLQVADFAYASDL
                     DQIQALPLFSQQLVVTLNQLGVFKENYKQM"
     gene            966..1175
                     /locus_tag="U0308_002978"
     CDS             966..1175
                     /locus_tag="U0308_002978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317922.1"
                     /translation="MYIEIYTVNGESIRLDDDAKINNISIHELSKADLKNLFNEKCIE
                     LTKYDLTYFINTNQVNWFLVSEGIH"
     gene            complement(1214..1642)
                     /locus_tag="U0308_002979"
     CDS             complement(1214..1642)
                     /locus_tag="U0308_002979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HEM2317923.1"
                     /translation="MGFLEAYKSFWRNYVNFSGRAPRSAYWYVVLWNVIIFVILYALA
                     FIFGISAIMEAAMGGTGMAGGGGAIVLVIILWLYLLAALLPTISLMVRRLHDSGKSGF
                     FVLLSLIPFAGGIIMLIFMCLESDGPNQYGDGDIDSKFDF"
BASE COUNT          750 a          372 c          275 g          495 t
ORIGIN      
        1 tataggatag agaggtatgt gattgtatgc ctaaatcaga aataagaaaa ttacttcaag
       61 aaatcaaaaa acaagtagat aatccgggga attcatctac aactgaaatt aaaaaaatgg
      121 cttcagaagc tggcattgac gaaaaaactg ccgaagaaat ctaccattta ctcactgaat
      181 tttatcaagc cgttgaagaa cacggtggaa tcgaaaaata tatgcattcc aatattagtt
      241 ggttaaaaat cgaattagaa ctactttccg catgttacca aattgctatt ttagaagata
      301 tgaaggttct tgatatttct gaaatgctca gcctaaatga tttgcggatt tttccaaaga
      361 ctccaagcca actacaaaat acttactaca aactaaaaaa agagcttatc caagtagaag
      421 atattccgaa aaacaagcct gggagaaaaa gaaaaacaca aaaaaataca aaaaaagaaa
      481 aaaccaatat tttcggcaaa gttgtgccag ctgaattcaa agcaccaacg tccatcaaag
      541 aacaaatcag ctacgacaaa tcacgcgaaa aaaacttggt tgatttactt tccggcgtta
      601 aaagcaatgt tcaactttta agcgaaaacc aaggtgaaga aaacaacgta tatgacttac
      661 taaaaagcat ttactcactc tcttcccttg ctgttcaaaa agaagaactc gacaaaaaat
      721 accaagactt acaaacaaaa tgccaagaat tggaacagga aaattcctat ttaaaacaac
      781 aaaacgaaac catgacagat tcgttccata cacttgtgtt acaagtagct gatttcgctt
      841 atgccagtga tttagaccaa atccaagcac tgccactttt cagccagcaa ctcgttgtaa
      901 cactgaatca acttggtgta ttcaaagaaa attataaaca aatgtaattt agaaggggtg
      961 gcacgatgta tatcgaaatt tataccgtaa atggggaatc tattcgcctt gacgacgacg
     1021 caaaaatcaa caacatcagc atccacgaat tatcaaaagc agacttgaaa aaccttttta
     1081 acgaaaaatg tatcgagtta acgaaatacg acttaacgta ttttattaat accaaccaag
     1141 tgaattggtt ccttgtaagc gaaggaatcc attaaaaaaa cgagctagga ttatctctta
     1201 gctcgttttc tatttaaaaa tcaaatttac tatctatatc cccatcacca tattggtttg
     1261 gtccatcact ttcaagacac ataaaaatta acataataat tccgccagca aatggaataa
     1321 ggcttaaaag gacgaaaaat ccacttttgc cagaatcatg taagcgtcga accattaagc
     1381 tgattgttgg aagtaaagcc gctagcaagt atagccataa aatgattacc agaacgattg
     1441 caccgccacc gccagccatt cccgtaccac ccatagctgc ttccataata gctgaaatac
     1501 caaaaataaa agctaaagca taaagtatta caaaaataat aacattccaa agtactacat
     1561 accaatacgc cgatctcggg gctctgccac taaagttaac gtaatttctc caaaatgatt
     1621 tgtaagcttc taaaaatccc atatttcctc ctatgtaaat aaatttcacc gtatctataa
     1681 ggatatatgt agccatccca ttacacaagc tcttacaata aagattcata aaatagacac
     1741 atttctattt ttaattgaaa atgtgtctat tttcacaggc ctttaaacct attagacctc
     1801 caaactatag atttttaata catatcagca ataaaacttt acacaaaatc cacccattga
     1861 tgattgcgag aaataatcac taaaatataa aa
//
LOCUS       DASDYK010000227         1868 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.230, whole genome shotgun sequence.
ACCESSION   DASDYK010000227 DASDYK010000000
VERSION     DASDYK010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.230"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            77..319
                     /locus_tag="U0308_002980"
     CDS             77..319
                     /locus_tag="U0308_002980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317924.1"
                     /translation="MKRIILTSTLIVWTIVCIYMSISMVSNNTGIAFPIWLHIILLIC
                     FLATGIVNVKKKEYLWSTMLFEGVLVVLLSLIIVLV"
     gene            complement(402..1379)
                     /locus_tag="U0308_002981"
     CDS             complement(402..1379)
                     /locus_tag="U0308_002981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEM2317925.1"
                     /translation="MKMTDPLYGTFEIEPVLAELIQSPLVSRLAHVHQGGASYLVNPL
                     WDLSRLDHSIGVMLFIRKFGGSLEEQIAGLLHDVSHTAFSHVVDYALDFEEEDYHEQI
                     FEDFVKTSTIPAILEKYGYSFEGIFEDISKWKILEQEAPELCADRIDYTLQDLYRHRK
                     ISLAEVEGFLQALVMVNGRLYLANISSAEWFVKQYYSEVIDYFYDPLNVYSYEILAEA
                     MRIAFQQETITTDDLRLTDAELLAKLNANSDAREKIQLLASVHLEENEVDFTYHHKKK
                     MRLINPSVLVDGRLIPADELSEKVREMNDWASERSKHGIYIKATKKSKQ"
     gene            1483..1788
                     /locus_tag="U0308_002982"
     CDS             1483..1788
                     /locus_tag="U0308_002982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317926.1"
                     /translation="MAEDAIDKMKTNSGSVIIPDETSVVAKIFRDKIDLVANAIGTSI
                     YQIKRDEALQDAEQKAREQPTLAGSVTDSIEVVEEIPLVHHLANAPRLRMKVVGNLV"
BASE COUNT          608 a          395 c          322 g          543 t
ORIGIN      
        1 aaaaaataga ttaacaacta aaaaatgtag gaaattggtt ctttaattcc aaagcatatt
       61 aaggagtaat agtatagtga aaagaataat tttaacaagt acattaatcg tttggacaat
      121 agtatgcatt tacatgagta tttctatggt tagtaataat actggcattg cttttccaat
      181 ttggcttcac atcattcttt taatctgctt cttagcgaca ggtatagtaa atgtgaagaa
      241 aaaagaatat ctttggagca ctatgttatt tgaaggcgtg ttagtagttc tattaagttt
      301 aattattgta ttagtctaac ggatgtaaat atatgaatag atggatgttc caaactaaat
      361 aggagtattg ttaactcaaa cctctcaagt aagcagtgtc actactgctt actttttttg
      421 gttgctttta tgtagatgcc gtgcttactt ctctcagatg cccaatcatt catttcacgt
      481 actttttctg aaagctcatc cgccggaata agccgcccat ccaccaaaac agacggatta
      541 atcaaacgca ttttcttctt atgatgataa gtaaagtcca cctcattttc ttctaaatgc
      601 acactcgcga gcaactggat tttctcccga gcatctgaat tcgcattcaa tttagccaat
      661 aattcagcat cagtcaaccg aagatcatcg gtcgtaatcg tctcctgctg aaacgcaatg
      721 cgcattgctt cagccaaaat ctcataacta taaacattca gcggatcata aaaataatca
      781 atcacctctg aataatattg cttaacaaac cattcagcgg acgagatatt cgccaagtaa
      841 agccgcccat tcaccattac taaagcctgc aaaaatccct ccacctcagc caaactaatt
      901 ttcctatgtc gatacaaatc ttgcaacgta taatcaatcc ggtcagcaca aagctccggg
      961 gcttcttgct ccaaaatttt ccacttcgaa atatcctcaa aaatcccttc aaaagaataa
     1021 ccatacttct ctaaaatggc aggaatcgtc gaagttttta caaaatcctc aaaaatctgc
     1081 tcatgataat cttcctcttc aaaatcaagc gcataatcca ccacatgtga aaaagcagtg
     1141 tgcgatacgt cgtgcagtaa gccagcaatt tgctcctcca aagagccacc gaacttccta
     1201 ataaaaagca tcacgccaat cgaatgatca agccggctaa ggtcccaaag cggatttact
     1261 aaataactcg cgccaccttg atgcacgtgt gctagccgtg aaaccaatgg gctttggatt
     1321 agttcagcca aaacaggttc tatttcaaat gttccgtaga gcgggtctgt cattttcatc
     1381 atattcacct cttttttaat tatatattag cgaacaaacg ttttccatat tttccctagc
     1441 aattccaatt ttgctgagac agtttataaa aaaattactg aaatggccga agatgcgatt
     1501 gataaaatga aaaccaattc gggtagtgta attattccag acgaaacctc tgttgttgca
     1561 aaaattttcc gcgataaaat cgacctagtt gccaacgcaa tcggcacatc tatttaccaa
     1621 atcaagcggg atgaagcgct gcaagatgcc gagcaaaaag cgagagaaca accaacctta
     1681 gccggctcag tgactgactc gattgaagta gtggaagaaa tcccattggt gcatcatctg
     1741 gctaatgcgc ccagattgcg catgaaagtt gtggggaatt tggtttaagg gaagtaaata
     1801 gtggagcatt ccggtcattt tttataaagt aatcctacgt gttataaaaa tacggtttat
     1861 acacatgg
//
LOCUS       DASDYK010000228         1844 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.231, whole genome shotgun sequence.
ACCESSION   DASDYK010000228 DASDYK010000000
VERSION     DASDYK010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1844)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1844)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1844
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.231"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            287..577
                     /locus_tag="U0308_002983"
     CDS             287..577
                     /locus_tag="U0308_002983"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317927.1"
                     /translation="MNKNHKKNTILNSLKGLTTTFSSKHKSEQVPLYYVTLLNCDECV
                     FQTEVFTSFKKAKACFYVKKQDILSKTTIENIYEQEQYFINTFSFVLKLGKN"
     gene            1158..>1844
                     /locus_tag="U0308_002984"
     CDS             1158..>1844
                     /locus_tag="U0308_002984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002368105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317928.1"
                     /translation="MTTKLEIAKSKLDRIKSEMLATRKEIRREHDLIPFGQPNIVGRG
                     DIYKNVKRMHTKGIKLLNEQEKQERRIEMLEKVEEFKSENELLKDVSVVGKTSYANIG
                     AKTSVNNLDYFRNKLQELEKKNEEAKAYNKTKPAVKARTLGAEITKLKKKIKLLEDMQ
                     EKAETTELSPKAKELVENGDVNQWKKKPIYYFVVGLNKVALELDDKGNFIVSHRYPAR
                     SESDKTFVASL"
BASE COUNT          737 a          311 c          287 g          509 t
ORIGIN      
        1 tgtccgcttt tctttaatat agcatacaca gcttttttat ttgtatgtaa acatatatac
       61 agatcctctt aacaaaaatt attccttttt ttgagagtgt tataaatagc cttcgctatc
      121 ctattctctc tgtcaacaaa atacaagggg cgtgagaact ttttttacgt tatcactaaa
      181 aaacttccac tacagcattc ccttgttttt cgtttcctac aagaataaac ggatgtcagg
      241 ctaaattaac ctaaaaaaat aaatttcaaa tgaaggagag agcaaaatga acaagaatca
      301 caaaaagaat accatattaa actcactgaa gggactaacg actacatttt catccaaaca
      361 taaatccgag caagttccac tctattatgt aaccttatta aattgcgatg aatgcgtgtt
      421 tcaaactgaa gtttttactt cattcaaaaa agcaaaagct tgcttttatg ttaaaaaaca
      481 agatatttta agcaaaacta caattgaaaa tatctatgaa caagaacaat acttcataaa
      541 tacattctca tttgttttaa agctaggaaa aaattaataa aaaaagaagc tttggatagt
      601 acaaagcttc tttttttatg ctgtactttt ttacaaaatg tttctttgat tttttcagca
      661 agtgacatcg ccaaacatac cccccatttg gcaatacccc ttttaaaaaa atactccact
      721 tcctccgttc cagccgcctc caccactacg gtcgcttcgc attagatcaa gatcaataaa
      781 ccgaaaatca aatacaaaag catttttcga ttatttcagt tgctcttttt gaaatgaccc
      841 gtgttttcag aaccagtagt tatcttagcc ttcggaatcc tattctcttc acattaaaaa
      901 gaccaggggc gtaaaaactt tttcttaacg ctctgctaaa aaacttttta ctacagcact
      961 cccttgtctt tttactcctc caagaatgac ggaatttcag gcgacgataa catacactga
     1021 aaaaacgggc tataacaaat caaagaaagg agaactataa acaatcaaaa tataaaaatt
     1081 cttttaaaga tggctctgaa aaacaaacct aaaaaaacag gttgaaagaa ctaaaaaaat
     1141 ataagggaat ggtgaccatg acaacaaaat tagaaatagc aaagtcaaaa ttagacagaa
     1201 ttaaaagcga aatgttagct actagaaaag aaattcgcag agaacacgat ttaattccat
     1261 ttgggcaacc taacatcgtt ggtagaggag atatatataa aaatgtaaag agaatgcata
     1321 caaagggaat taaactactc aatgagcaag aaaaacaaga acgtagaatc gaaatgctcg
     1381 agaaagtaga agaatttaaa agtgaaaatg aattgctaaa agatgtgagc gttgtaggaa
     1441 aaacaagcta tgcaaatatt ggagcaaaaa caagtgtgaa taatttggac tatttcagaa
     1501 ataagttaca agaattggaa aaaaagaacg aggaagcaaa agcatataac aaaaccaagc
     1561 cagctgttaa agcgagaaca ctaggagcag agataacaaa gcttaaaaag aagattaaat
     1621 tattagagga tatgcaagaa aaggctgaaa caacagaatt aagtcctaag gcaaaagagc
     1681 ttgtagaaaa tggtgatgtt aatcaatgga agaaaaaacc tatttattac tttgtagtcg
     1741 gcttaaataa agtagcctta gaacttgatg ataaaggtaa tttcattgtc tctcatcgtt
     1801 acccagctag aagtgaaagc gataaaacct ttgtagcatc ttta
//
LOCUS       DASDYK010000229         1825 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.232, whole genome shotgun sequence.
ACCESSION   DASDYK010000229 DASDYK010000000
VERSION     DASDYK010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.232"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            76..399
                     /locus_tag="U0308_002985"
     CDS             76..399
                     /locus_tag="U0308_002985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEM2317929.1"
                     /translation="MFKKKIDWRDERGFTLVEMLIVLLVVSVLLLLTIPNIVSQSKSI
                     NDKGCEAFISMVQGQVQSYQLDKNSIPSVADLVSGGYLKANQKTCPNGNSIKIDSSGN
                     VSEKK"
     gene            396..818
                     /locus_tag="U0308_002986"
     CDS             396..818
                     /locus_tag="U0308_002986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEM2317930.1"
                     /translation="MKINGFTLLEMLLVLTISFTLITLTIFPISSTLSTLREKQLLEE
                     IKATIYYAQINAVATKQDTFISFDPMRNQLITYTNSKTLAILPFSQTLTLTQPKIGNF
                     RFSSTDGSINRFSTIHLTSSTNNYKLIFQIGKGRFRIE"
     gene            811..1095
                     /locus_tag="U0308_002987"
     CDS             811..1095
                     /locus_tag="U0308_002987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEM2317931.1"
                     /translation="MNKINGFSLVESMVSLLLFSMVCSFLLPTAMTIFEKLDYQKETS
                     RVYQEIYEHSELLRHKSVPVNFKDERIESFHYQGGIQICAKNKSEEKCIF"
     gene            1058..1525
                     /locus_tag="U0308_002988"
     CDS             1058..1525
                     /locus_tag="U0308_002988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComGF family competence protein"
                     /protein_id="HEM2317932.1"
                     /translation="MQKINRKKNVSFRNGSPAFTLLETILSITIILSISSLIPLFFQC
                     YNKTIQISNIDQTTEWQLFLIQTRLELEKATNIQIDRNKLSFSNGKDLITYSKYNDLV
                     RRQVNGKGHEPLLTNVKDYQLIKKEKQLHLTVQDSNTQIYTSVFALPEVVSNP"
     gene            1522..>1825
                     /locus_tag="U0308_002989"
     CDS             1522..>1825
                     /locus_tag="U0308_002989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComG"
                     /protein_id="HEM2317933.1"
                     /translation="MKTNAFTLPFTIFIALISILIVTGTASIFKTQIQYEKMIQNYYL
                     ASTKLNLAFIEIKETSSLSHQFKINFKGAKIDCQATDNQLTEFNCQITLENGYTLAK"
BASE COUNT          664 a          322 c          265 g          574 t
ORIGIN      
        1 aattgtatcc atttatttat ccattttata tcccatgttt tctatggtaa atcaaattta
       61 aaaggaggag ttttaatgtt taaaaagaaa attgattggc gagatgagcg aggctttact
      121 ttggtggaga tgttaattgt attgttagtg gttagtgttt tgttactcct tactattccc
      181 aacatagtat cacaaagtaa gtcaatcaac gataaaggat gcgaggcctt tatttcaatg
      241 gttcaaggtc aagttcagtc ctaccaatta gataaaaatt caatcccttc tgtagctgat
      301 ttagtaagtg gaggttatct aaaagctaac caaaaaactt gtcctaatgg aaatagtatc
      361 aagatagata gctcaggaaa tgtttctgag aaaaaatgaa aataaatgga tttactttat
      421 tagaaatgtt acttgtacta actatcagct ttacactaat cacattaacc atctttccta
      481 tttcaagtac attatccacg cttagggaga aacaactact agaagaaata aaagccacca
      541 tttactatgc gcaaataaat gctgtagcaa caaagcaaga tacgtttatt tcatttgatc
      601 caatgagaaa ccaactcatc acatatacta actcaaaaac acttgctatc cttccattct
      661 cacagacgtt aactttaaca caaccaaaaa taggaaattt tcgtttctcg agtacagatg
      721 gatccattaa tcgtttttca acaattcacc tgacaagttc gacaaataac tacaagctaa
      781 tatttcaaat cggaaagggg cgttttagaa ttgaataaaa ttaacggatt ctctttagtt
      841 gaaagcatgg tttcacttct ccttttttca atggtttgta gttttctatt acccacagca
      901 atgactattt ttgaaaaact agactatcaa aaagaaacta gcagagtcta tcaagaaatt
      961 tacgaacata gcgaactatt acggcacaaa agcgttccag ttaactttaa ggatgaacgt
     1021 atcgaaagtt tccattatca aggaggtatc caaatttgtg caaaaaataa atcggaagaa
     1081 aaatgtatct tttagaaatg gctcacctgc tttcactctt cttgaaacaa tcttgtctat
     1141 tacgatcatt ttaagtatta gctcgctcat tccattattt tttcaatgct ataacaagac
     1201 tatccagatt agtaacattg atcagacaac agaatggcaa ctttttctca ttcaaactcg
     1261 tctagaatta gaaaaagcga ctaatattca gattgatagg aataagcttt cttttagtaa
     1321 tggcaaagat cttatcacct attccaaata taatgattta gttcgtcgac aagtaaatgg
     1381 aaaaggacat gaaccattgc ttactaatgt gaaagattat caattaatca agaaagaaaa
     1441 acaacttcat ttaacggtgc aagactctaa tactcagata tatacatctg tattcgcatt
     1501 accagaagtg gtatccaatc catgaagact aatgcattta cgctcccatt taccattttc
     1561 attgcgctta tttcaatttt aatcgttact ggtactgctt ctatctttaa gacacaaata
     1621 caatatgaaa aaatgattca aaattattat ttagcctcca ctaaactaaa tttagctttc
     1681 atagaaatta aggaaacatc ctcactttca catcaattta aaataaattt caaaggcgca
     1741 aagatagatt gccaggcgac ggataatcaa ctaacagaat tcaactgtca aatcacacta
     1801 gaaaacggct atacattagc aaaaa
//
LOCUS       DASDYK010000230         1819 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.233, whole genome shotgun sequence.
ACCESSION   DASDYK010000230 DASDYK010000000
VERSION     DASDYK010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1819
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.233"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..541)
                     /locus_tag="U0308_002990"
     CDS             complement(<1..541)
                     /locus_tag="U0308_002990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2317934.1"
                     /translation="MHSDEEIFKETTPKALLQLLKKDYYFHDYCYQEIIPRGKEIKMN
                     NSKGFQIYLVESGYFSYCLQNEYGDSGIISFVGGEIAINLIPIIKEEPEESVLRSLTE
                     VHCWVLDPDFVERVLDESGQKAKYLLSNLLYTRKVYFKASKRNFMKKELRIRACLKEL
                     GLYMGRVTKDKEFILPDEIN"
     gene            complement(606..1223)
                     /locus_tag="U0308_002991"
     CDS             complement(606..1223)
                     /locus_tag="U0308_002991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2317935.1"
                     /translation="MTKIKRIMTGIIQENCYIIYQDKVALIVDPGDEASKIEAEIAKL
                     EVKPVAVLLTHCHYDHIGALEEIRKTFNIPVYVSPLEQEWLSNPELNLSAHIAGKAII
                     AQPAENEFTLGEYSIEGFRFKVVPTPGHSIGSVSFIFDDFVVVGDALFKGSIGRTDLY
                     TGDFDMLINSIKTQLFVLPDDFPAYSGHGDATTIGHEKKTNPYFN"
     gene            1354..1743
                     /locus_tag="U0308_002992"
     CDS             1354..1743
                     /locus_tag="U0308_002992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2317936.1"
                     /translation="MTAKMLHTCIRVKNLTESITFYEKALGLKEVRRKDFPDFEFTLV
                     YMAFEEGGFELELTYNYDQKEAYDLGNGYGHLAVGVPDVHALLKEHQEAGFTVTDLKG
                     LPGEDPFYYFLTDPDGYKTEIIQDGAL"
BASE COUNT          586 a          341 c          282 g          610 t
ORIGIN      
        1 tattgatttc atcaggcaaa atgaattcct tatcctttgt tactctgccc atgtacagac
       61 caagctcttt taagcatgct ctaatacgaa gttctttctt cataaaatta cgcttactag
      121 ctttaaaata aacttttctt gtataaagta agttagataa tagatatttc gctttttgac
      181 ccgattcatc caaaacacgt tccacaaaat caggatcaag tacccaacaa tgaacttctg
      241 tcaaactacg cagtacggac tcctctggtt cttctttaat aatcggaatt aaattaattg
      301 ctatttcgcc accaacaaag ctaataatcc cagaatctcc atattcattt tggaggcaat
      361 aagagaagta tccgctttcg actaagtata tttggaaacc tttcgaatta ttcatcttga
      421 tttctttacc tctaggaata atttcttgat aacaataatc atgaaagtag taatcttttt
      481 ttagtaattg tagtaatgct tttggcgttg tttctttgaa aatttcctca tctgaatgca
      541 ttttccaaca tcctttccat tgattacaaa aaaactgcag aataaatgct tctgcaagtt
      601 cttttttagt taaaatatgg gtttgttttc ttttcatgac cgatagtggt tgcatcacca
      661 tgacctgaat aggctgggaa gtcatctgga agtacaaaca gttgtgtttt aatactattt
      721 attaacatat cgaaatctcc tgtgtataaa tccgtacgac cgatactacc tttaaacaaa
      781 gcgtcgccaa ctacgacaaa atcatcgaaa ataaaactaa cgcttccgat agaatgccct
      841 ggtgtcggta ctactttaaa acgaaaacct tctatactat attcacctaa cgtaaattca
      901 ttttctgccg gttgcgctat aattgcttta ccagctatgt gcgcagataa atttaattct
      961 ggattggata accattcttg ttctagtggg ctaacatata ctggaatatt aaatgttttg
     1021 cgaatctctt ctaaagcacc aatatgatca tagtgacaat gagttaacaa aactgccact
     1081 ggttttactt caagttttgc aatttctgct tcaattttac ttgcttcatc gcctgggtca
     1141 acaattaaag ctaccttatc ttgataaatg atataacaat tttcttggat tattcctgtc
     1201 atgattcgtt tgatttttgt catttcactt ccgcctttct tcacattcat cattatacct
     1261 aaaaagccac cttacttcca tcaatattcc ttgtttgtat tcacttccga gatatactac
     1321 aatgaagaaa gaagtttaaa aggaggaata aaaatgactg caaaaatgtt acatacatgt
     1381 atccgcgtaa aaaacctaac agaatcgatt actttttacg aaaaagcatt aggacttaaa
     1441 gaagttcgcc gcaaggactt cccggatttc gaattcacat tagtatatat ggcgtttgaa
     1501 gaaggcggtt ttgaactaga attaacgtac aactacgacc aaaaagaagc ctacgattta
     1561 ggaaatggtt atggtcactt agcagttggt gttccggacg tacatgcttt attaaaagaa
     1621 caccaagaag ctggttttac tgtgacagat ttaaaaggac tacctggcga agatccattc
     1681 tattatttct taacagatcc agatggttat aaaacagaaa tcattcaaga tggcgcttta
     1741 taattagaag aactggagaa gcttaatggg aaaatatttt attataattt tgatcgcact
     1801 agcaattaat ggaatcagt
//
LOCUS       DASDYK010000231         1790 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.234, whole genome shotgun sequence.
ACCESSION   DASDYK010000231 DASDYK010000000
VERSION     DASDYK010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.234"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..153
                     /locus_tag="U0308_002993"
     CDS             <1..153
                     /locus_tag="U0308_002993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317937.1"
                     /translation="KFGGSLKEDQAVLADFNILGEVQKFDFISENTEEVKNYQLIKEQ
                     VAGKYK"
     gene            260..940
                     /locus_tag="U0308_002994"
     CDS             260..940
                     /locus_tag="U0308_002994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HEM2317938.1"
                     /translation="MIIDVLQHVPHEGPGLIANWARENQHQLKIHSLFEENAHVPNDS
                     DFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQQIAATFGSEITV
                     NKEKEVGWFPVKRTSDKLSFFPESLNVFHWHQDTFALPAGATRLFASEGCLNQAFLYA
                     ENIIGLQFHFEMEKAGIETILQIDKAFITSGKYVQSVEVMREKDVPEDNKQMLEAILD
                     YLINPKTI"
     gene            complement(965..1324)
                     /locus_tag="U0308_002995"
     CDS             complement(965..1324)
                     /locus_tag="U0308_002995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lin0512 family protein"
                     /protein_id="HEM2317939.1"
                     /translation="MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLL
                     PDGDLQNMVVNIKLALPCDEEKLDEDTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKE
                     DKNDLMYIVNASVETGY"
     gene            complement(1331..1789)
                     /locus_tag="U0308_002996"
     CDS             complement(1331..1789)
                     /locus_tag="U0308_002996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2317940.1"
                     /translation="MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFF
                     TARMPGLTINELLTFLEISKQALHQPLAELKERELLTIEQGRRDKRQRCIFLTTAGKE
                     LENELGAAQRKQMAEIFANSSDTDGLHFTEVMEGYAKNRPGAALIKDFKE"
BASE COUNT          557 a          313 c          369 g          551 t
ORIGIN      
        1 aaatttggtg gaagtttaaa agaggaccaa gctgttctag cagatttcaa cattcttgga
       61 gaagtgcaaa aatttgattt tatctcagaa aatactgagg aagtaaaaaa ttatcaatta
      121 attaaagagc aagtcgcagg gaaatataaa tgagtaaact taaacacctg attaataacc
      181 aggtgttttt tagagaaatc tcagttgcac aaaccttaga attcggtcat aatagaaaaa
      241 aatgacagga gctgatcaat tgattattga tgtattgcaa catgtgccgc acgaaggacc
      301 tggacttata gcgaattggg cgagagaaaa ccagcatcag ttaaaaatac attctctatt
      361 tgaagaaaat gctcatgttc caaatgactc ggatttttta attgtacttg gaggacccat
      421 gggaataaat gatacagccg aatttccgtg gttaaaagac gaacgtaagc taataaagcg
      481 attaagtgaa cagcataaac ctgtttttgg tgtctgcctc ggcgcacaac aaatcgcagc
      541 aacattcgga agcgaaatca ctgtaaataa agaaaaagaa gtaggctggt ttcctgtcaa
      601 aagaacttcc gacaaattat catttttccc agaatcatta aatgtgtttc actggcatca
      661 agatacgttt gcgttaccag ctggcgccac gcgtttattt gctagtgagg gttgtttgaa
      721 ccaagctttt ttgtacgctg aaaatattat cggtttacag tttcattttg aaatggaaaa
      781 agcggggatt gagacgattt tgcaaattga taaggcgttt atcacatctg gaaaatatgt
      841 tcaaagcgtg gaagtgatgc gagagaagga tgttccagaa gataataaac aaatgcttga
      901 ggctatttta gattatttaa taaatccaaa aaccatctga cgagaaagtc agatggtttt
      961 ttctttagta tccagtttca acagaagcgt tgacgatata cattaaatcg tttttgtctt
     1021 ctttgtcttc taagaaaatg ccgcttgtag tcatcattcc gccagccatt ttctcaatag
     1081 ttacagtgcc ataagggata atcgcgcgaa tggtatcttc gtcaagtttt tcttcatcac
     1141 acggtagcgc caatttgata ttaacaacca tgttttgtaa gtcgccatct ggaagaagcc
     1201 cttgaatacc gggcatagag ttcgtaaaaa tcgcatttct tacagctcgt tcggctgctt
     1261 ttgtaatatt ttggccgtga acatcaacgc caaagccagt ttggataaat agaatttgtt
     1321 ccatcataaa tcactcctta aaatctttta tcaaagcggc gcctggtcgg tttttcgcat
     1381 atccttccat aacttcagtg aaatgtaatc cgtcagtatc ggaggaattg gcgaatattt
     1441 ctgccatttg cttacgttgt gcggcaccaa gttcattttc taattctttg cctgctgtag
     1501 ttaggaagat gcagcgttgg cgtttgtcgc gtctaccttg ctcgatcgtg agaagttcgc
     1561 gctctttcag ttcagcgagt ggctggtgta gggcctgttt tgatatttct aaaaaagtta
     1621 aaagttcatt aattgtaagt ccaggcatcc gcgccgtgaa aaataaaata cgatgatgca
     1681 atcttttgag tgaatgtttg gcaataatca aatcagcggt ctctgtaaat gctttataac
     1741 caaagtaaaa taaagcgatt tgttgattca tgttttgctc attgttcata
//
LOCUS       DASDYK010000232         1748 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.236, whole genome shotgun sequence.
ACCESSION   DASDYK010000232 DASDYK010000000
VERSION     DASDYK010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.236"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1014
                     /locus_tag="U0308_002997"
     CDS             <1..1014
                     /locus_tag="U0308_002997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene dehydrogenase"
                     /protein_id="HEM2317941.1"
                     /translation="FRPTTLRAIPSLTLGRSLMDDLARYFNSKYLRIAFSLQMRYLGM
                     SPWDIPAAYSIIPFSEYYYGTFHPIGGQNKIVEAMQQVVTENKGKFFFNSEVTAFESN
                     GKEITGAVLANGKTIEADYYFTNLDFIYSLTNEHPDKLDNKEYSSSAFILYLGLKTVL
                     PFSHQSIIFPENYREFAHNTMHKKILSKDIAIHLTNPSATDNTMAPINHSSIRIMVPV
                     PNNTSNIDWKKETPAFRQLVLETIKERLDLPDLESQIEEEYIITPIDWEKKYHVKHGA
                     IFGLQHLWRQHGYLHPSKKSPTFKNLFVIGAGAMSGSSLPFIIENAQIATQKFLQKEK
                     KSE"
     gene            complement(1015..>1748)
                     /locus_tag="U0308_002998"
     CDS             complement(1015..>1748)
                     /locus_tag="U0308_002998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carotenoid biosynthesis protein"
                     /protein_id="HEM2317942.1"
                     /translation="VLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWLGSAI
                     TLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREITL
                     KINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLYITQNGFTILQLSDFINWWLL
                     GLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIIIAFFVFLSFYLDLWTSIAIII
                     VSNIIFTACYFFSLEKEAQPKKKSE"
BASE COUNT          628 a          328 c          276 g          516 t
ORIGIN      
        1 ttccgcccta caactttgcg tgctatacct agtttgacac ttggacgatc gttgatggat
       61 gatttagcaa gatattttaa tagtaagtac cttcgcatcg ctttttcctt acagatgcgg
      121 tatttaggca tgtcaccatg ggatattcca gctgcttata gtattattcc tttttccgaa
      181 tattattatg gaacctttca tccaattggt gggcaaaata aaattgtcga agcgatgcaa
      241 caagtagtta cagaaaataa agggaagttt ttcttcaatt ccgaagtgac agcatttgaa
      301 tcgaatggta aagaaataac tggcgctgtt cttgccaatg gaaaaacaat tgaagcagat
      361 tattatttca ccaatttaga tttcatttat tctttaacaa atgagcatcc agataaattg
      421 gacaataaag aatactcctc ttctgccttt atcctttatc ttggtttaaa aacagtgtta
      481 cctttttcgc atcaatcaat tattttccct gaaaattacc gagaatttgc gcataataca
      541 atgcataaaa aaatcctctc taaggatatc gctatacatt tgactaatcc ttctgcaact
      601 gataatacaa tggcgccaat taatcattct agtattcgaa ttatggttcc tgtgcctaac
      661 aatacgagta atattgattg gaaaaaagaa acacctgctt ttcgtcaatt agtgctagaa
      721 actatcaaag aacggttaga tttaccagat ttagaatcgc aaattgaaga agaatatatc
      781 attacaccga tagactggga aaagaaatat catgttaaac acggcgcgat ctttggttta
      841 cagcatttat ggcgccagca cggttactta catccctcca aaaaatcgcc tacattcaaa
      901 aacttatttg taattggtgc aggcgcgatg tcgggtagct cgcttccatt tattattgaa
      961 aatgcgcaaa tcgcaaccca gaaattttta caaaaagaaa agaaatccga gtaatcattc
     1021 ggatttcttt ttaggctgcg cttctttttc caaactgaaa aaataacaag cagtgaaaat
     1081 aatattagaa acgataataa tcgcaataga tgtccataaa tcaaggtaaa aggacaaaaa
     1141 tacgaaaaag gcaataataa tccaataaac gatgacaatt tctgatttta aatctggata
     1201 tttaagacgc tcccaactat ccgttaaact caaaataaag taaatcatta aatgtaaaat
     1261 aagtcctaaa agccaccaat taataaagtc agataactgc aaaatcgtga agccgttttg
     1321 cgtaatgtaa agttgttttg attgcattgt aattggttcg attaaaacct caaaaatcat
     1381 taccatcgtt gctgcgataa acgaataaat acctccacga atccagtcaa tattaatttt
     1441 caatgtaatt tcccgagcga taatatgcgt cccggcaacc attccgaccc aaataaagcc
     1501 cattgtaata ggaattccgt aaacacttcc acctaacgtt gaaccaatat attcatctgt
     1561 ataacttagt tgcatccatt caatacatgt acttacaaca aaaataagta gcgtaatagc
     1621 agaaccaagc catttaccat attgcataat aaagaaaaca gccgcaaaaa caccagtaaa
     1681 tactaaaaat agtgattgaa ctgcagttag ctctggtgga ataatgtgta aggatactaa
     1741 caaaacgc
//
LOCUS       DASDYK010000233         1715 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.237, whole genome shotgun sequence.
ACCESSION   DASDYK010000233 DASDYK010000000
VERSION     DASDYK010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.237"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>1715
                     /locus_tag="U0308_002999"
     CDS             <1..>1715
                     /locus_tag="U0308_002999"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEM2317943.1"
                     /translation="PEKTVNINKEFLSIIAPEGGVTFKEDRYVKTGNGYEACIHIIDT
                     PVNVGQYWLADIINRDDTVVVLDVVSENRAVTLKKLKKAMSEQQSRTFEERTIQEKYS
                     AQYELEVLEDLNRQIAEQGEIIKEIHIRIYVAASDTETLDKKVGIIKEDLDGRSFRSS
                     VFLFEEKDEWLSKIISIDEQKKLASKRPGKGVPASTLGAGYFLDHTFLNDTTGFPLAT
                     TATGGSFIWDIFTVNGKRTFFNAIVLGNMGMGKSTLLKLIEEDAYAKNYFIRGYDKVR
                     DYEFLVKQQGGKYLTLDGTDGKLNPLDIYATATKGEEASEIDIRGSFQQHISKVCTLF
                     QFMSRDATDSDLKVFEQLLISFYIHKKLWGKNISDEELERIGVVNLAPERYPTMSEFL
                     HYAEQVFKVKSQEGISTNMQMMYEKVILTLRNMVESYGDVFDGITTMRDFSDEQVVFF
                     DIRGLSNMKQQVFHAQLYMSLTLIWNHAVQHGMKVKRMIEAGEISFAEAIKTLILIDE
                     CHNLINESNIFAVETITNFQREMRKFLAGILFATQSPNEMLPDGMDSSTQSKLRTVFN
                     LTQYK"
BASE COUNT          627 a          230 c          341 g          517 t
ORIGIN      
        1 aacctgaaaa aacagttaat atcaacaaag agtttttatc tataatagcg cctgagggag
       61 gagtcacttt taaagaagat cggtatgtaa aaactggaaa tggatatgag gcttgtattc
      121 atattataga cacccctgtt aatgtaggac aatactggtt agctgatatt atcaatcgag
      181 atgatacagt tgttgtattg gatgttgtta gtgaaaatcg agctgtcact ttaaaaaaat
      241 taaaaaaagc aatgtctgaa caacaatctc gtacttttga agagagaact attcaagaaa
      301 aatatagcgc gcaatatgaa ttggaagttt tagaagacct taatcgtcaa attgcagagc
      361 aaggggaaat tattaaagaa atacacattc gaatatatgt agcagcttct gatacggaaa
      421 cacttgataa aaaagtaggg ataattaaag aagatttaga tggacgatca ttccggtcgt
      481 ccgtcttttt atttgaagaa aaagacgaat ggttatctaa aataatttcg atagatgagc
      541 aaaagaaact cgcaagcaaa cgtcctggta aaggtgtgcc agcatcaaca ttaggggcag
      601 gttatttctt agatcatacg tttttaaacg atactacagg ctttcctctc gctacaacag
      661 caaccggagg atcttttatt tgggatattt ttacagttaa tggcaagaga acttttttta
      721 acgctatcgt cttagggaac atgggtatgg gtaaatccac tttattaaaa ttaattgaag
      781 aagatgcata tgcaaaaaat tattttatta gaggatacga taaagtgcga gattatgaat
      841 ttttagtaaa gcaacaaggt gggaaatact taacgcttga tggtactgat ggtaaattaa
      901 atcctttaga catttatgca acagcaacca aaggagaaga agcaagtgaa attgatattc
      961 gtggaagctt tcaacaacat atatcaaaag tatgtacact ttttcaattt atgtctcggg
     1021 atgcaaccga ttctgatttg aaggtattcg aacaactttt gatttcgttt tatattcata
     1081 aaaaactttg gggaaaaaat atttctgatg aagaattaga gagaattgga gtcgtaaatt
     1141 tagcacctga aagataccca accatgagtg aattcttaca ttatgcagag caagtattta
     1201 aggtgaaatc tcaagaaggg atttcaacca atatgcagat gatgtatgaa aaagtaattt
     1261 taactttaag aaacatggta gagagttatg gtgatgtttt tgacggtatt acaaccatgc
     1321 gagatttttc agatgaacaa gttgtatttt ttgatataag aggactttct aacatgaaac
     1381 agcaagtatt tcatgctcaa ttgtatatgt cgctgacgtt aatttggaat catgccgtgc
     1441 aacatggaat gaaagtgaaa cggatgattg aagcaggaga aataagtttt gctgaagcga
     1501 ttaagacatt aattcttatt gatgagtgtc acaatttaat taatgaaagt aacatttttg
     1561 ctgtagaaac aattacaaat ttccaacgtg aaatgagaaa atttttagct ggaattcttt
     1621 ttgcgacaca atcaccaaat gaaatgttac cagatggaat ggactcgagt actcaaagta
     1681 agctaagaac tgtatttaac ttaacgcagt ataaa
//
LOCUS       DASDYK010000234         1623 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.238, whole genome shotgun sequence.
ACCESSION   DASDYK010000234 DASDYK010000000
VERSION     DASDYK010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1623)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1623)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1623
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.238"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            178..771
                     /locus_tag="U0308_003000"
     CDS             178..771
                     /locus_tag="U0308_003000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2317944.1"
                     /translation="MPKLVTGYERQQTKNLIIEHTSHLIYIKKGIQGFTVEDITRAAR
                     IGKRKFYTCFPSKEACLFEVVEYSYQAQLEAFKKIMEEKGSLKSKMTRFLKEVYLSEK
                     SINNYFSPEDFHAILQKLPPTYTEREERMTSEVLETAMTYIDLTRAQWEALVMLLDCL
                     TYTATRSYVETAKKAKEETLDILINSIADYVEKQTQC"
     gene            799..1578
                     /locus_tag="U0308_003001"
     CDS             799..1578
                     /locus_tag="U0308_003001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEM2317945.1"
                     /translation="MNKETERKLAASLTSQSIEILPFIPYFLQDFFELGSSPKDITYL
                     IKQHMPLSAESNFLDLACGKGAVSIGIAKELGNPVKGIDLIPAFIEEAKCKAKEAQVE
                     SLCQFEVGDVNKSVQNEKNYDAVIFGAAADILGNPAETLEKLQGTVKEGGYIIIDEAY
                     VPELAHNNQVKYQNYEYLTRNEWLNLFEQNQLQLVEELEGTAEVDFELEKQHLLTRAN
                     ELIQQYPEKKTLFEGYLKSQWSEYDDLEEHLIAVTWILHKK"
BASE COUNT          612 a          237 c          324 g          450 t
ORIGIN      
        1 ttttcaaatc taatactaaa ctattagtaa acgtattcga tataagaacc gtggaaaatc
       61 catttcacct catttgacat tgttaaatat ttagtttaag gtgtttttgt agaactggaa
      121 attgataaat agttccatta aaagcgatat gcaagaaatt tttcaaggag gagcaaaatg
      181 ccaaaactcg ttacgggata tgagcgtcaa caaactaaaa acctcattat cgaacataca
      241 agccatttaa tttatataaa aaaaggaatt caaggtttta ctgtggagga tattactcga
      301 gcagctagga ttggaaagcg aaaattctat acgtgttttc cctccaaaga agcatgccta
      361 tttgaggtgg tggaatattc ctatcaagca caattagagg catttaaaaa aattatggag
      421 gagaaaggtt cgttaaaaag caagatgact cgttttttga aagaagtcta tctttcagaa
      481 aagagtataa ataactactt ttcaccggaa gatttccacg caatactcca aaaactccct
      541 ccaacatata cggaaagaga agaaagaatg acaagtgaag tcctggaaac tgccatgacg
      601 tatatcgatc ttacgagagc tcaatgggag gctttagtga tgttactgga ttgtttgact
      661 tacactgcga caaggagtta tgtagaaact gccaaaaaag cgaaagaaga gactttggat
      721 atattaataa attctatagc tgattatgta gaaaaacaga ctcagtgcta acgaaaaata
      781 ttttaggagg gtaaataaat gaataaagaa accgaacgaa agcttgctgc gtcactcact
      841 tctcaatcaa tagaaatatt accgtttatt ccgtattttt tacaagattt ttttgaattg
      901 ggtagtagtc cgaaagatat tacttattta attaagcaac atatgccgtt atcagctgaa
      961 agtaattttt tggatttagc ttgcggaaaa ggagctgttt ccattggtat cgctaaggaa
     1021 ctaggaaacc ctgtcaaagg aatagattta attccggcat ttatagaaga agcaaaatgc
     1081 aaagcgaaag aagcgcaagt agagtcactg tgccaatttg aagtaggaga tgtaaataaa
     1141 tcggttcaaa acgaaaaaaa ttatgatgcc gttatatttg gtgcagcagc agatatactt
     1201 ggaaatccag cagaaacgtt ggaaaaattg cagggaactg ttaaagaagg cggttatatt
     1261 attatagacg aagcatatgt gcctgaatta gcgcacaata accaggtgaa gtatcaaaat
     1321 tatgaatatc tcactcgaaa cgaatggctg aatttatttg aacagaatca attacaattg
     1381 gtggaagagc tagagggaac agcagaagtg gattttgaac tggaaaagca acacttatta
     1441 acaagagcca atgaattgat tcaacaatat ccagagaaaa aaaccctttt tgaaggatac
     1501 cttaagagcc aatggagtga atacgatgac ttagaggaac atcttattgc tgttacctgg
     1561 attttacata aaaagtaaac attgaaagga agtgttttaa tgagagaata tttagattca
     1621 aaa
//
LOCUS       DASDYK010000235         1599 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.239, whole genome shotgun sequence.
ACCESSION   DASDYK010000235 DASDYK010000000
VERSION     DASDYK010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.239"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..142
                     /locus_tag="U0308_003002"
     CDS             <1..142
                     /locus_tag="U0308_003002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3578 domain-containing protein"
                     /protein_id="HEM2317946.1"
                     /translation="YNTAPKLKIIDNLFDETLEIKPINYIVKGVNQNDNNTKNQLPKN
                     TL"
     gene            99..1181
                     /locus_tag="U0308_003003"
     CDS             99..1181
                     /locus_tag="U0308_003003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEM2317947.1"
                     /translation="MTTTLKTSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLESDIYG
                     NGAVIANFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIH
                     EQDGLKELQQITPILLGTANRLLTIADIKSLREPVSSVLIELPQREIGGQLPAFEELE
                     EISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGVAGAILA
                     GNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSC
                     PGVKTVPEVPVSNMFHVYFEKSADEIGAVLTKIQDETGVGISGYLQEKSADVCAFEVS
                     VGDAFAEIPAKNLELVFECLEKELRL"
     gene            complement(1239..>1599)
                     /locus_tag="U0308_003004"
     CDS             complement(1239..>1599)
                     /locus_tag="U0308_003004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1433 domain-containing protein"
                     /protein_id="HEM2317948.1"
                     /translation="DLAFFNDQKEKITIYLKYNIPDFNTVTFTNEEFNSIGISIDGYI
                     NNDKNLSFTAGKDVKLFSCSDELDKMFKDPRKGYDEIIEKEETSLEMPKEKTKTINEI
                     LSDLKSYEDQIISRNKI"
BASE COUNT          467 a          247 c          379 g          506 t
ORIGIN      
        1 ttataataca gcgccaaaac tgaagattat tgataattta ttcgatgaga ccctagaaat
       61 aaaaccaatc aattatatcg taaaaggagt gaaccaaaat gacaacaaca ctaaaaacca
      121 gctaccaaaa aacaccttat aaactaggcg ggaacggtcc gcgcaatgta ggtgttctga
      181 cagaagcact tcaaaatatt gatgataacc tagaaagcga tatttacgga aatggcgcag
      241 ttattgcaaa ctttgaaaca aaaatcgcga aaattctcgg gaaacaatct gcggtgtttt
      301 tcccaagtgg gacgatggct cagcaaatcg cgttaaggat ttgggctgac cggaaagaga
      361 atcggcgcgt ggcatatcat ccgctttcgc atttggagat tcacgagcaa gacggactaa
      421 aagagttgca gcaaatcacg ccaatattac ttggaacagc gaatcgactt ttgacaattg
      481 ctgatattaa aagcctgcgc gagccagttt ctagtgtgct tatcgaactt ccacaacgag
      541 aaattggtgg gcagctgcct gcttttgaag agcttgagga gatttcggag tattgccatg
      601 aacagggtat ttcgttgcat cttgacgggg cacggttatg ggaaatcacg ccgttttatc
      661 agaagtctgc ggaagaaatt tgtgcgctgt ttgatagtgt gtatgtgtcg ttttacaaag
      721 gaattggcgg ggttgctggg gcgattctgg ctgggaatga tgattttgtg caagaggcga
      781 aaatctggaa acgacggtat ggcggggatt tgattagttt gtatccatat attttgtccg
      841 cggattatta ttttgaaaaa cggattggga aaatggcgga atattttgag gcggcgaaag
      901 gattggcgga gcgctttaat tcgtgtccgg gcgtgaagac tgtgccggaa gtgccggttt
      961 ctaatatgtt tcatgtttat tttgagaagt cggctgatga gattggggcg gttttgacga
     1021 agattcagga tgaaactggg gttgggattt cggggtattt gcaggagaaa tcggcggatg
     1081 tttgtgcgtt tgaggtttcg gttggggatg cgtttgcaga gataccggca aaaaatttag
     1141 aactagtttt tgaatgtttg gaaaaggaac ttagactata aatttggata taaaaagaca
     1201 agctattttc tatagtagct tgtctttttt agtatgaatt atattttatt tcgactgatt
     1261 atttggtctt cataagattt taaatcggat agaatttcat taattgtctt agttttttct
     1321 tttggcattt ctaaggacgt ctcttctttt tctataattt catcgtaacc ttttctaggg
     1381 tctttaaaca ttttatcaag ttcatcagag caactaaaaa gtttgacgtc tttccccgca
     1441 gtaaaactca gatttttatc attatttatg tatccatcaa tacttatacc aatagaatta
     1501 aattcttcat tggtgaaagt aactgtatta aagtctggaa tattatattt aagatatatc
     1561 gttatttttt ctttttggtc attaaagaaa gctaggtct
//
LOCUS       DASDYK010000236         1551 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.240, whole genome shotgun sequence.
ACCESSION   DASDYK010000236 DASDYK010000000
VERSION     DASDYK010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1551)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1551)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1551
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.240"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            262..879
                     /locus_tag="U0308_003005"
     CDS             262..879
                     /locus_tag="U0308_003005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317949.1"
                     /translation="MLMSLSVLPLATYASETENTPTESYDGENFIATQIGNTLVIEDK
                     KTGETVKIEMNDEENGVITSDDGTIENVHRDEEGNVYVDNELELEAPPLDIEDGINIA
                     TQPRLLKASKWIYVQTTKYNTTTQGNMRSLALGILSFMPITGPIFGIVAIIDAARSMG
                     AKTLYVRVKQYRTSGYQFYKYDSYYYANASLTKLVKKTSQTKRMW"
     gene            1189..1533
                     /locus_tag="U0308_003006"
     CDS             1189..1533
                     /locus_tag="U0308_003006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317950.1"
                     /translation="MQKDTYNGIRLSVIQLIDSKKENLKENNIKLTIIKNEKDGYVVE
                     LDNDKCMAEIVVEEPTYAPYRYISFEVVSLMDGKVKIIYSWYDDETSQWSDIEKELNK
                     GIQFLNNFKTME"
BASE COUNT          571 a          195 c          301 g          484 t
ORIGIN      
        1 atgtcgcgct tttaggtaaa ggagatggat aaaatgaaaa aaattattat tggtgtgttt
       61 ttcgggattc ttattctagt tattgttggt ctatatgttt catatgtcta tatgaatcaa
      121 agctttatat gggttgcagg gatacttttg ttgttaggta cattattcaa ttggtttttg
      181 tataataagt atctgtctaa aaaaacataa taagggagcg agataaccat gaaaaaaatc
      241 attatagtac tagcatcagt tatgttaatg tctctttcgg ttctgccact ggcaacttat
      301 gcatcagaaa cagagaacac tcctactgaa tcatatgacg gagaaaattt tatagcaact
      361 caaataggta atactttagt tattgaagat aagaagacgg gcgaaactgt aaaaattgaa
      421 atgaatgacg aagaaaacgg ggtaattaca tctgatgatg gtacaataga aaatgtacat
      481 agggatgaag aaggtaacgt ttatgtagat aatgagcttg aactagaagc acctccttta
      541 gacattgaag atggcataaa tatcgccact cagcctcggt tactgaaagc ttctaaatgg
      601 atatatgttc aaacaactaa gtataataca accacacaag gcaatatgag aagtcttgca
      661 ttggggattc tatcattcat gccaattaca ggtccaatct ttggaatagt tgcaattatt
      721 gatgctgctc gatcaatggg ggcgaaaaca ttatatgtta gagtgaaaca atatcgtact
      781 agtggttatc aattttataa gtatgattct tattattatg ccaatgctag tttaactaag
      841 ctagttaaaa aaacatccca gactaaacga atgtggtagg gcattattaa aaaaactagt
      901 ataaactaaa agaccttgct caaagattag caaggtctta gactggggaa gaaaaagtct
      961 tctctttttc tgttttatgg aaatgttatt ccgtatttta gacgagtttc ttctatggaa
     1021 gaatacacaa ttttagggaa tgtgtctgat atggcagcta gattctctga tagtgaataa
     1081 gatttgaaat tacctaatgt ttactacagt gaaaagcaaa ttagagaaga agtgactcgt
     1141 tctttagaag ctttagcttg aatcataaaa tttgagagga acgtaattat gcaaaaagat
     1201 acatataacg gcattcgatt gagtgtaatc caattgatag attcaaaaaa agaaaatctg
     1261 aaggagaata atataaaatt aacaattata aagaatgaaa aagacggtta tgttgtagaa
     1321 ctggataatg acaaatgcat ggcagaaatt gtagttgaag aacctactta tgccccatat
     1381 cgctatattt catttgaagt agtttctttg atggatggaa aagttaaaat tatctattct
     1441 tggtatgatg atgaaacaag tcaatggagc gatattgaga aagaattaaa taaaggaatt
     1501 caatttctaa ataattttaa aacgatggag taataaaaga acattattgc t
//
LOCUS       DASDYK010000237         1549 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.241, whole genome shotgun sequence.
ACCESSION   DASDYK010000237 DASDYK010000000
VERSION     DASDYK010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.241"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..1104)
                     /locus_tag="U0308_003007"
     CDS             complement(<1..1104)
                     /locus_tag="U0308_003007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3578 domain-containing protein"
                     /protein_id="HEM2317951.1"
                     /translation="MNLVALLKYMQENYGEQRTNYPMAGNEVAKKFKQGVKTAFETTL
                     LGEDYEISASIGTGGWANVPWIAVHDKEISTSVQEGVNLVYLFTNDYQGVYLSLNQGY
                     TYVNKKYKNTKLTLGKIARFWQGNLSTLTSENGFTIDPINLGREESRYTNLVKGYESC
                     NIYSKYYDIKDLEETDNDLLSQDLLQMLTVFKELKGHLMLDDKKGIEATIDFIINNGT
                     FNELSEKTKSKKIFEIEKKRTLVLGKEETRSRYSLVKEEKAPYITKRDYAKEAIRNTE
                     KGLQGEYLVINYERERLMKNTITKSYADKITHVSESGDGHGYDIISYDINPDASNEVI
                     EIYIEVKTTTGNRDAPFYLSDNELNVARIKGELY"
     gene            complement(1310..>1549)
                     /locus_tag="U0308_003008"
     CDS             complement(1310..>1549)
                     /locus_tag="U0308_003008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317952.1"
                     /translation="YSYETESDKENVETMLKFLKSKNNVKITKNEQKGDEYHIDVKAD
                     EKDFVFSLEMQSGKLIFKKVDTKEKVLIKETYKKN"
BASE COUNT          455 a          288 c          179 g          627 t
ORIGIN      
        1 ataaagctca ccttttattc tcgcaacatt taattcatta tctgataaat aaaatggagc
       61 atctctattt cctgtcgttg ttttaacttc gatataaatc tcaatcactt catttgatgc
      121 atctggattt atgtcatagg aaataatatc atatccatgc ccatcaccac tttcagaaac
      181 atgagtgatt ttatctgcat aagattttgt aatagtattc ttcattaacc tttctctttc
      241 ataattaatt accaaatact ctccttgcaa tcctttttcc gtatttctaa tagcttcttt
      301 cgcataatct cttttagtga tgtaaggtgc tttttcttcc ttaactaacg aatatcttga
      361 acgtgtttct tctttaccta aaactaatgt gcgctttttt tctatttcaa agattttctt
      421 tgattttgtt ttttcgctta attcattgaa agttccatta ttaattatga aatcaattgt
      481 agcttctata ccttttttgt catccaacat taaatgacct tttaattctt taaatacagt
      541 gagcatttgc agcaaatctt gtgataataa atcattatca gtttcttcca aatccttaat
      601 atcataatat ttactataaa tattacaaga ttcataacct ttcacaagat tagtataacg
      661 agattcctcc cggccgaggt taattgggtc aattgtaaaa ccattttcag atgttaacgt
      721 agataaattt ccctgccaaa aacgagcaat tttccctaaa gtcaatttag tatttttata
      781 ttttttattt acatatgtat atccttgatt taaagataaa taaacacctt ggtaatcgtt
      841 tgtaaacaaa taaactagat taactccctc ttgtacactt gtgctaattt ctttatcatg
      901 cacagctatc caagggacat ttgcccaacc gcctgtacca atggatgcag atatttcgta
      961 atcttctcct aataaggtgg tttcaaaggc tgttttaaca ccttgcttaa atttttttgc
     1021 gacttcattc ccagccattg gataattggt tctttgctcc ccatagtttt cttgcatgta
     1081 ttttaataat gccactaagt tcatcacaaa catccttttt atataatgta ttttcatctt
     1141 ctcgtataca ttatacctaa gaatgtagat ttgttgtgaa tttaactata aaatatgctt
     1201 gttcaacaaa aaaactatcc tcccgaggac cctcgaaaga atagtcttca caaataaatt
     1261 ttaaaaaata ggtggttaca acggacttcc gcttctcgct tctaataatt taatttttct
     1321 tgtaggtttc cttaatcaaa actttctctt tagtatcgac ttttttgaaa attaattttc
     1381 cactttgcat ttctaaagag aatacgaaat ctttttcatc tgctttgaca tctatgtgat
     1441 attcatcccc tttttgttca tttttggtta ttttgacatt attcttggat ttaagaaatt
     1501 ttagcattgt ttctacattc tctttatcac tttcagtttc ataactgta
//
LOCUS       DASDYK010000238         1499 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.242, whole genome shotgun sequence.
ACCESSION   DASDYK010000238 DASDYK010000000
VERSION     DASDYK010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1499
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.242"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            445..825
                     /locus_tag="U0308_003009"
     CDS             445..825
                     /locus_tag="U0308_003009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317953.1"
                     /translation="MIKSGEYTCINGKEYKVILKDKNGKSYIISDKKESDFQKYADGI
                     YEKEIDLEQLENLYYIIPKAVYEGNNFMIRPNMKNEGICFGTNDSELAKELKFERTDK
                     YLYEKWVPESEIEIMEERKNIPLN"
     gene            1197..1472
                     /locus_tag="U0308_003010"
     CDS             1197..1472
                     /locus_tag="U0308_003010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317954.1"
                     /translation="MEIVIQRAQNVLKLIDEEFPNQKLYNGIIRDIYVLTEKILKSAE
                     GNCLITEKIDLNSLGRQFVDNGGSYNSPVILEFEKLVNQLKNTEVFK"
BASE COUNT          607 a          165 c          298 g          429 t
ORIGIN      
        1 gaactgccag aatactcctg tccattatgg gataattaag agtagaaaaa atatcttaag
       61 tggatatgga gagttatatt gatagaaatg acccaaggac tggtgaatat ccttatgtta
      121 ttttcctcat ttcacttgtg tatttttgag catacgctat tgatatgggg aattttcttc
      181 caaagccata aaggagtaaa gatagtgaac aataccagca tatacaataa aattgaaaca
      241 gagttttcta ttataaatga tgcaaatagc ctaatttcta ttgctgttcg aggaataaat
      301 acggacgggt ctctgtgtac attaaatgtc tttacggcat caaaaaaatt gatggagcta
      361 atctttatgg agtattagat ggagttgaaa cattggcgga tttatagctc ttgaacttta
      421 acttagaaag aagtagtgaa cataatgata aaatcaggag aatatacttg tataaacggg
      481 aaagaatata aagtgatttt aaaagataaa aatggaaaaa gttatataat aagtgataaa
      541 aaagagtctg atttccaaaa gtatgctgac ggtatctatg aaaaagaaat tgatttagaa
      601 caattagaaa atctgtatta tataattccg aaagcggtgt acgaaggaaa caattttatg
      661 ataagaccta atatgaaaaa tgagggaatt tgttttggaa caaatgattc tgagttagca
      721 aaagaattaa aatttgaaag aacagataaa tatttatatg agaaatgggt acctgagtct
      781 gagatagaaa tcatggagga acgaaaaaat atacctttaa attaacttaa tgagtggcta
      841 aatatagaac taaaatagat gataaagtta ttgaaatgga tagagaaatt ctacctcagg
      901 gagtaataga ttccttctta gatggaaatt atcgtacagt aaaaactact gaggaaataa
      961 cggtgtatag agagtatttg gtggaaatgc aaagtctaca ggaagttttg tgacttcaga
     1021 gaagacaata agtcgaatag acgcaaaaat agatatggca ttattacctg gatggaagaa
     1081 tactcgcatg tacgaagcag aaataattat tcctaaaggc cagcaaatta atattgggga
     1141 aaattgcacc tcaagtaatc gagtcgacag atacaatatt aaaaggaggg gtatagttgg
     1201 agatagtaat acaacgcgca caaaatgttt taaaattaat tgatgaagag tttcctaacc
     1261 aaaaattata taatgggata ataagagata tttatgtatt aacagaaaag atacttaaat
     1321 ctgctgaggg aaactgccta atcacagaaa aaatagattt gaatagtctg ggcagacagt
     1381 ttgtagataa tggtggttct tataacagtc cagtaatatt agaatttgag aaacttgtaa
     1441 atcaactaaa aaatacagaa gtttttaaat aacaacaaga taagtagcat agtgagagt
//
LOCUS       DASDYK010000239         1497 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.243, whole genome shotgun sequence.
ACCESSION   DASDYK010000239 DASDYK010000000
VERSION     DASDYK010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.243"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            4..366
                     /locus_tag="U0308_003011"
     CDS             4..366
                     /locus_tag="U0308_003011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317955.1"
                     /translation="MENKSDFEVCIGKSDSATTNFKIKDNGNNHEVIVRVSIALERTM
                     PKEPKDYICEFVKLAKEVMKEKSYQEFLVVDLTASNCERINGTLILPNFNELAYEPEP
                     GHEILFQKVKDVELKGSY"
     gene            546..1151
                     /locus_tag="U0308_003012"
     CDS             546..1151
                     /locus_tag="U0308_003012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016627749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM2317956.1"
                     /translation="MEEVQPIKDLKKIALMKDILSRGEFGERNVLLFSIGINTAYRIS
                     DLLSLKLSDVLEIYRQKVRVKSRLKMTEQKTEKNNSVILTKKLQKDIWDFVSKEHAGW
                     IVQQDLDHYLFTSRKKNAGERPLSRQQGWHIISEAGKKAGLENLGTHSMRKTFGYHLY
                     KNGVGLELIQVLLNHSSPRITLRYIGIEQEDKDQAVSSLGL"
     gene            1208..>1497
                     /locus_tag="U0308_003013"
     CDS             1208..>1497
                     /locus_tag="U0308_003013"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317957.1"
                     /translation="MEKLKTNINNIYKDDLDLAKKERREPFYILVGYELTTGLLNVIE
                     RNPNQNVSISSILDYYKMDTQELYDFVIQNRPEIPEFFSMVAFSLETFADVQ"
BASE COUNT          542 a          182 c          328 g          445 t
ORIGIN      
        1 ttaatggaaa ataaaagtga ttttgaagta tgtataggaa agtctgattc agcaacaaca
       61 aattttaaaa ttaaagacaa tgggaataat catgaagtaa tagtgagagt tagtattgca
      121 ttagagagga caatgccaaa ggaacccaag gattatattt gtgagtttgt aaaactagct
      181 aaggaagtta tgaaagaaaa aagttaccaa gagtttttag tagtagactt aacagctagt
      241 aattgtgaaa gaatcaatgg aacattaata ttgcctaatt ttaatgagtt agcttatgaa
      301 cctgaacctg gacatgaaat tttatttcaa aaagtaaaag atgttgagtt gaaagggtca
      361 tactaaaaat atcgaatctt actcaatgac attgagtaag attggtgtaa atggcgtgaa
      421 acattggcgt tctaagagag aagacgattt tttgttttct cttttttctt ccttcatttt
      481 gaatcttact taatatatgg tataatgatg ttaagtaata ttcggaaaag aggtggattt
      541 ttcaaatgga agaagtgcaa ccgattaaag atttgaaaaa aatagcattg atgaaagaca
      601 ttttatccag gggggaattt ggagaaagaa acgtgttact tttttccatc ggtataaata
      661 cggcttatcg catttcagat ttgttgagtt tgaagttaag tgatgtgtta gaaatatatc
      721 ggcaaaaagt ccgggtgaaa agtcgattga agatgaccga gcaaaaaacg gaaaaaaaca
      781 actccgtgat cttaacgaag aagttgcaga aggatatttg ggattttgta tcgaaagaac
      841 atgcaggatg gattgtgcag caagatttag accactactt gttcacgagt cgcaagaaaa
      901 acgccggaga acggccgtta agtaggcaac aagggtggca tattatttca gaagccggta
      961 aaaaagccgg attagagaat ctgggtacgc atagcatgcg gaaaacgttt ggttaccatc
     1021 tatataaaaa tggggtggga ttagaactta tccaggtgct attaaatcac tcatcgccac
     1081 gtattacttt gcgatatatc gggatcgagc aagaggataa agaccaagcg gtaagtagct
     1141 tgggtttata gttatttcat tggcaacgta acaggaacaa cacaagtgat aataggagtt
     1201 gattttcttg gagaagttaa aaacgaatat taataatata tataaagatg atctagattt
     1261 agcaaaaaaa gaacgtaggg aaccatttta tattctcgtt gggtatgagt tgactacggg
     1321 attgttaaat gttattgaaa ggaatccaaa tcaaaatgtt tctatttctt ctatattaga
     1381 ttattacaaa atggacacgc aagagttgta tgattttgta atacaaaata gaccagaaat
     1441 tccggagttt ttttcaatgg ttgcatttag tttagaaacg tttgccgatg tacagga
//
LOCUS       DASDYK010000240         1476 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.244, whole genome shotgun sequence.
ACCESSION   DASDYK010000240 DASDYK010000000
VERSION     DASDYK010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1476)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1476)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.244"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>1476
                     /locus_tag="U0308_003014"
     CDS             <1..>1476
                     /locus_tag="U0308_003014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM2317958.1"
                     /translation="AGISIIIPLYNVEEVILETLESIHEQTFDMYEVLLIDDGSTDKT
                     IEMVTEYISDKPKFQLHTQPNGGPASARNYGLRLANRMYICFVDSDDIIPNYALQLMY
                     DGAISTGSKLITGATKRFNSEGEWFIPMHIQYNIAKPGMKTLLKNPELFYSIGPCAKL
                     YHHSLIDGVFFPENIRYGEDQPFVLHALLQAENIYTVEKVVYYYRLRDGESQSLTQSV
                     NKDPIRILKSVFQIFDYGEAELLKNNTEYEIALKYYQRVSSVELWGALRAAIESKKSE
                     NQQIAFTMTLDWLKTKSDDFLNIIPSFRYFLLFSSIERVRYITRDNKENYRQLITYLW
                     ERQGEEAKIAFRKAYPIHMKAALQIMEHNNWGAARKISFKFIIRRKFKAPILIRKISR
                     GIIFRLATLMPRKKDQVILATERSTSLEGNLLAIYDYLFYNDMPQKVYVFLRKNRNWF
                     EMFQLYYALGRTKTIVLDDYYNKIYGLKFNKKTHVVQSWHA"
BASE COUNT          517 a          227 c          275 g          457 t
ORIGIN      
        1 aagcgggaat aagtattatt attccattat ataatgtgga ggaagtaatc ctggaaacgc
       61 tcgaaagcat ccatgagcaa acatttgaca tgtacgaagt tttattaatt gacgatggtt
      121 caacggataa aacaatagaa atggtgacag aatatatatc agataagcca aaatttcagt
      181 tgcatactca accaaatggt ggaccagctt cggctaggaa ttatgggttg cgtcttgcga
      241 atagaatgta tatttgcttt gtggacagtg atgatattat tccgaactat gcacttcaac
      301 taatgtatga cggtgcaata tccactggtt caaaattgat tacaggtgca acgaaacgct
      361 ttaattcaga aggtgaatgg ttcattccga tgcatatcca atataatatt gccaagccag
      421 gaatgaaaac actactgaaa aatcccgagc tattttattc gataggtcct tgtgcgaaac
      481 tctatcatca ttctttgata gatggtgtgt ttttccctga aaatattcgt tacggtgaag
      541 atcaaccatt tgttttgcat gctttacttc aagcagaaaa tatctatact gtagaaaaag
      601 tagtttatta ttaccgctta cgtgatggtg aatcgcaatc attaacgcaa tctgtaaata
      661 aagatccaat tcgtatttta aaatctgttt ttcaaatatt tgactacggg gaagcagagt
      721 tactcaaaaa taatacggaa tatgaaatag ctttaaaata ttatcaacga gtatctagtg
      781 ttgagctttg gggcgcttta agggcggcta ttgaaagtaa gaaaagtgaa aaccaacaaa
      841 ttgcttttac gatgacatta gactggttaa aaaccaaatc agatgacttc ctaaatataa
      901 ttccttcctt tagatatttc ttgttgttca gtagtatcga acgtgttcgc tatattacaa
      961 gagacaataa agaaaactat cgccaactaa ttacgtattt gtgggagaga caaggggaag
     1021 aagcaaaaat tgcatttaga aaagcatatc ctatccatat gaaagctgct ttacaaatta
     1081 tggaacataa taattgggga gccgctcgta aaatctcctt taaatttatt atccgtcgta
     1141 aatttaaggc gcctattcta attcggaaaa taagcagagg cattatattt agactagcta
     1201 ctttgatgcc acgcaaaaaa gaccaagtta ttttagctac agaacgtagt acaagcttag
     1261 aaggaaattt attagccatt tatgattacc tgttttataa tgatatgcca caaaaagtct
     1321 atgtgttttt acggaaaaat cgtaattggt ttgaaatgtt ccaattgtat tatgcattag
     1381 ggcgaactaa aacaattgta ttagatgatt attacaacaa aatttatggt ttgaaattta
     1441 ataaaaagac acatgtggta caatcatggc atgcga
//
LOCUS       DASDYK010000241         1447 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.245, whole genome shotgun sequence.
ACCESSION   DASDYK010000241 DASDYK010000000
VERSION     DASDYK010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1447
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.245"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            58..>1447
                     /locus_tag="U0308_003015"
     CDS             58..>1447
                     /locus_tag="U0308_003015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HEM2317959.1"
                     /translation="MKRKISSIIVVGIMFFQSLTTYPFITEAKENEQKEEINKPSKIT
                     KGLTNSLKYTKTILETGDTYDSVFPDSALAKVVAKEATGSENTTQLVTQADLNKIKSL
                     NGYNKGISVLTGIDLLVNVTSISLNNNQVTDISPIDQLPNLVSLSVKNNQISSLILNA
                     QNQLPKLTTIDIENNPDLNTIDIQDQPQLVDVKTSGYTGLRKLTTVIAKNNPELVNLG
                     QYTIRNVYFSQVASLTKVELVNLPKVRKVNLERNSINELKVTDLAIEDLPLGENELTD
                     TVFDNIQNLPNLKTLDLSKNQLEEVVLDKTDVENLPNLMTLNIQQNLAIKLINVQDQP
                     QLVDVKTSDYKELSALTTVIAKNNPELVNLGYPIMQNVYFSQVASLTKVELANLPKVR
                     AVRLERNSINQIELNNFVSVKDVNLNTNKITNDSIEKFKGMPILATLNLNKNQITNIN
                     MLDDFPEMTTLNI"
BASE COUNT          597 a          241 c          216 g          393 t
ORIGIN      
        1 ttaaatacag aataaactca ttctttaaga taataattac atctaaggag actaatcatg
       61 aaaagaaaga taagttctat cattgtagtc gggataatgt tctttcaatc attaactacg
      121 tatccattta tcaccgaagc caaagaaaat gaacaaaaag aagaaataaa taaaccctca
      181 aaaataacta agggattaac taattcccta aaatacacta agacaattct tgaaacaggg
      241 gacacctatg atagtgtatt tcctgacagt gctttagcta aagtagttgc taaagaagca
      301 acggggtcag agaatacaac tcagctagta acacaagctg acctgaataa aatcaaatct
      361 ctcaatggtt ataataaagg aattagcgta ttaacaggaa tcgatttgct agtcaatgtg
      421 acaagtataa gcttgaataa taatcaagta acagacattt ctccaataga tcaattacct
      481 aatttagtaa gcctatcggt aaaaaacaat caaattagca gtcttatctt aaatgcgcaa
      541 aatcaactcc cgaaactaac aaccattgat attgaaaata atcctgatct taatactatc
      601 gatatccaag atcaacccca attggtagat gtaaagacat ccggttatac aggattacgc
      661 aagttaacaa cggtaattgc caaaaacaat ccagaattag tcaatttagg ccaatacact
      721 atccgaaatg tctactttag ccaagtagca agtttaacga aagttgaact agtcaatctc
      781 cctaaggtaa gaaaagtaaa ccttgagagg aacagtatta atgagctaaa agttactgat
      841 ttggccattg aagatctgcc attaggagaa aacgaattaa cagatacagt atttgataac
      901 atccaaaatc tgcctaattt aaaaacgtta gatctgtcaa aaaaccaact agaagaagtt
      961 gtattagaca aaacggatgt agaaaatcta cccaatttga tgacactaaa tatacaacaa
     1021 aatttggcta taaaattgat aaatgttcaa gaccaacccc aattggtaga tgtaaaaact
     1081 tctgattata aagaattatc tgcgttaaca acagtaattg ccaaaaataa tccagaatta
     1141 gttaatttag gttatcccat tatgcaaaat gtttacttta gccaggtggc aagtttaacg
     1201 aaagttgaac ttgctaacct tccaaaagta agagcagttc gattggaacg taatagcatc
     1261 aatcagattg aactaaataa tttcgtttca gtaaaagacg tgaatctaaa tactaacaaa
     1321 ataacaaatg atagtataga gaaatttaaa ggcatgccta tactagcaac tttaaattta
     1381 aacaaaaacc aaattaccaa tataaatatg cttgatgatt tcccagaaat gactacttta
     1441 aatattg
//
LOCUS       DASDYK010000242         1389 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.246, whole genome shotgun sequence.
ACCESSION   DASDYK010000242 DASDYK010000000
VERSION     DASDYK010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1389
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.246"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..408
                     /locus_tag="U0308_003016"
     CDS             <1..408
                     /locus_tag="U0308_003016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2317960.1"
                     /translation="LLAINGTPITIYWGQYLYYFVAMIAFLFSVTLFNATISVLVRDY
                     YIMLQSVMRVLFYVTGIVWNLETMLPQWLVDLLKLNPIYYVVNGFRETFLMNKGFWES
                     PSYTMYFWLITLTLLFVGATLHMKFRERFVDYL"
     gene            421..>1389
                     /gene="tagH"
                     /locus_tag="U0308_003017"
     CDS             421..>1389
                     /gene="tagH"
                     /locus_tag="U0308_003017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acids export ABC transporter
                     ATP-binding subunit TagH"
                     /protein_id="HEM2317961.1"
                     /translation="MGKNIKVSFKHVSKEYDLYQNKSDKIKGLFMPKSQKMQSFWALR
                     DVSFDIHDGETVGLIGINGSGKSTISSIMSGVIPPTQGEVIINGETSLIAIAVGLKGP
                     LTGYENIRLKLLMHGMKSSQINKLMPSIIEFADIGDFINQPIKNYSSGMRSRLGFAIS
                     VHTNPDILVIDEALSVGDQTFYEKCVDKINEFKARGKTIVFVSHSLGQVKSLCDRIIW
                     MHHGEIREMGTAQEVAQKYDEFVKWFNKQPNDYKKKYQKEHKENQKAPQKKIYPNPNA
                     NKYRLTLFDKIFLTVLIALTILFGTLVATGKSFKGLISEESTTQIEK"
BASE COUNT          469 a          212 c          268 g          440 t
ORIGIN      
        1 ttgctcgcaa ttaatggaac tcctattaca atctattggg gtcagtactt gtattatttt
       61 gtagccatga ttgcttttct cttcagtgtt actttattta atgcaacaat tagcgtttta
      121 gtaagagact attatattat gctgcaatct gtcatgcgtg tactttttta cgtaacaggg
      181 attgtttgga atttagaaac aatgttgccg caatggctag tagatttact caaactaaat
      241 ccgatttact atgtggtaaa cggctttaga gagacattct taatgaataa aggcttctgg
      301 gaatctccat catacacgat gtatttctgg ttaatcacgc taacattact atttgttggt
      361 gcgacactac acatgaaatt ccgcgaacgc ttcgtggatt atttatagga ggttagacag
      421 atgggtaaaa atataaaagt atcatttaaa catgtgtcga aagaatatga cctctatcaa
      481 aataaatctg ataagatcaa aggcttgttc atgccgaaaa gtcaaaaaat gcaatccttt
      541 tgggcgttgc gagacgtatc ttttgatatt catgatggtg aaacagtagg acttattggg
      601 atcaatggtt ctggtaagtc aactatatcg agtattatgt caggtgttat tcctccgaca
      661 caaggagaag tcattatcaa cggagaaact tctttaattg ccattgcagt gggactaaaa
      721 ggtccgctga cgggttatga aaatattcgc ttgaaattac tcatgcatgg aatgaaaagt
      781 tctcaaatta acaagttgat gccaagtatt atcgaattcg ctgatatagg tgattttatt
      841 aatcaaccaa ttaaaaacta ttcaagcggg atgcgttctc gtttaggttt tgcaatttcg
      901 gtgcatacca atcctgatat tttagttatt gatgaagcct tatcagtggg tgaccagact
      961 ttttatgaga aatgcgttga taagattaat gaatttaaag cgcgtggcaa aactattgtt
     1021 tttgtcagtc actcacttgg acaagtaaaa agtttgtgtg acagaattat ttggatgcat
     1081 cacggtgaaa taagagagat gggtacagca caagaagttg ctcaaaaata tgatgagttt
     1141 gtaaaatggt ttaacaaaca accaaatgat tataagaaaa aatatcaaaa agagcataag
     1201 gaaaatcaaa aagctcctca gaaaaaaatc tatcctaatc ctaatgccaa taaatacagg
     1261 ctaactcttt ttgataaaat atttttaact gtgctaattg cattaacgat actatttgga
     1321 acactagtgg cgacagggaa atcttttaaa ggcttaatta gtgaagaatc cacaacacaa
     1381 attgaaaaa
//
LOCUS       DASDYK010000243         1370 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.247, whole genome shotgun sequence.
ACCESSION   DASDYK010000243 DASDYK010000000
VERSION     DASDYK010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1370
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.247"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..302
                     /locus_tag="U0308_003018"
     CDS             <1..302
                     /locus_tag="U0308_003018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2705 family protein"
                     /protein_id="HEM2317962.1"
                     /translation="SLQYLLELFIDAQKALLLINGYVIISILMADLIYQNTTVTWPYY
                     LLLPNYGMGFRTGLIPFTNTSTLLISVPTSLIILLVVLLCVFIVAIKKFKTTDIL"
     gene            362..946
                     /locus_tag="U0308_003019"
     CDS             362..946
                     /locus_tag="U0308_003019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2317963.1"
                     /translation="MLTNINYSFEPGKIYGVFGKNGSGKTMLLRSLAGLIIPTSGKIF
                     IDNKELHHDISFPPSMGIIIENMELLPQFDARTNLKILSKIKNIASDEDIDNAIDRVG
                     LSPHIDKKVKKYSLGMKQRLNIAQAVFEKPAVILLDEPTNAIDDQGIELINQLLLEEK
                     KRGATIIIASHHKEDIEPLCDMSIRMDQGKIIHD"
     gene            939..>1370
                     /locus_tag="U0308_003020"
     CDS             939..>1370
                     /locus_tag="U0308_003020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003721645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317964.1"
                     /translation="MTKTKFVIFIALTVITLLLFLVPKGIQYLKSQNPELLNTAESIK
                     LQAGEYTVGKDIKVGIYDMQVTKGSLSYYSTRLSKGDEIIGINLLDANKLYFEGSGEV
                     ELTPAEFNPIKPSANIFTIQHSGSYEVGKQIPAGKYSLTYTI"
BASE COUNT          483 a          221 c          226 g          440 t
ORIGIN      
        1 ttagtttgca atacctttta gagctattta tagatgcgca aaaagcttta ttacttataa
       61 atggatatgt aattatttct attcttatgg cagatttaat ctatcaaaac acaacagtta
      121 cttggcctta ttatttatta cttcctaatt atggtatggg ctttagaact ggattaattc
      181 cgtttactaa tacatctact ttactaatct cagtacctac cagtttaatt attttgctag
      241 tagttttact ttgcgtgttt atagtcgcta ttaaaaaatt taaaacaaca gacattttat
      301 gataacggag gatttttatg attaaaattg ttaatttgca aaaaaaatca agaggacgga
      361 agtgcttact aatattaatt attcttttga gcctgggaaa atctacggag ttttcggaaa
      421 aaatggatct ggaaaaacaa tgttacttag atcgcttgct ggcttaatca taccaacaag
      481 tggcaagata ttcattgata ataaagaact tcatcatgat atttcttttc cgccaagtat
      541 gggcattatt atcgaaaata tggaattact tccccaattt gatgcgcgga caaatttaaa
      601 aatattatct aaaattaaaa atattgcaag cgatgaagat attgataatg ccattgatag
      661 agtaggatta tctccacata ttgataaaaa agttaaaaaa tattcgcttg gaatgaagca
      721 aagacttaat attgcacagg ccgtttttga aaaacccgct gtcatcttgc ttgatgaacc
      781 cacaaatgcg atagatgatc aaggtattga actaattaac caattacttt tagaagaaaa
      841 gaaacgcgga gccactatta ttattgcaag tcatcataaa gaagacatag aaccactttg
      901 tgatatgagt atccgaatgg accaagggaa aattatccat gactaagacc aaattcgtta
      961 ttttcatagc actgacagtc attacactgc ttctattcct cgttcctaaa ggtattcaat
     1021 atctcaaaag ccaaaatcct gagctattga atacagctga aagcattaaa cttcaagctg
     1081 gtgaatacac tgttggaaaa gatataaaag ttggaatata tgatatgcaa gtaacaaagg
     1141 gttcgctatc ttactatagt acaaggcttt ctaaaggcga tgaaataatt ggtattaatt
     1201 tactagatgc taataaactg tattttgaag gaagcggtga agtcgagctt acaccggcag
     1261 aatttaatcc cattaaacct tctgccaata tttttacaat ccaacactcc gggtcttacg
     1321 aagttggtaa acaaattcca gctgggaagt acagcctgac ttataccatt
//
LOCUS       DASDYK010000244         1355 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.248, whole genome shotgun sequence.
ACCESSION   DASDYK010000244 DASDYK010000000
VERSION     DASDYK010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1355)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1355)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.248"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            1..603
                     /locus_tag="U0308_003021"
     CDS             1..603
                     /locus_tag="U0308_003021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEM2317965.1"
                     /translation="MMDLVKKHKNYILIGIAILCAGLVYIWIPDSKSDAVTANQAVTK
                     EEKPKKEETKLSNEVYIDIKGAVRTPGVYKLPMDARVQDVVKIAGGLTAEADCSKLNL
                     AEKLKDEMSIYVYKKGEEGPATQGANTEEASTGSAKINLNSATKDDLQQVPGIGESKA
                     TAIIEYREKEGLFQTIEDLKNVSGIGEKTVEKLKEYLDVN"
     gene            675..1235
                     /locus_tag="U0308_003022"
     CDS             675..1235
                     /locus_tag="U0308_003022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComE operon protein 2"
                     /protein_id="HEM2317966.1"
                     /translation="MQRIAWDQFFMAQSHLISSRSTCTRLMVGATIVRDKRIIAGGYN
                     GSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTDKAELYVTHFPCLACT
                     KSIIQAGIKKVYFAKDYKNHPYALELFNIAGVELQKVEFDESVLQVNNWNGEKMHTLV
                     KEAAVEVNIEPEKAEQLYQNISEKLN"
BASE COUNT          491 a          206 c          290 g          368 t
ORIGIN      
        1 atgatggact tagtaaaaaa acacaaaaat tatatcttaa tagggattgc tattctttgt
       61 gctggtttag tttatatttg gataccagat agtaaatctg atgctgtaac tgccaatcaa
      121 gcagtaacga aagaagaaaa accgaagaaa gaagaaacaa aattatcaaa tgaagtttat
      181 attgacatta aaggagcagt aaggacccct ggtgtctata aactgccaat ggacgctaga
      241 gttcaagatg tggtgaaaat tgcaggaggg ctcacagctg aagccgattg cagtaaattg
      301 aatttagctg aaaaactaaa agacgagatg agtatctacg tttataaaaa gggagaagaa
      361 ggtcccgcaa cacaaggagc taacacagaa gaagcaagta ccggttctgc gaaaattaac
      421 cttaacagtg caacgaagga cgatttacaa caagtcccag ggattggaga atcgaaggca
      481 acagcgataa tagagtaccg agaaaaagaa ggcttattcc aaacaataga agatttaaaa
      541 aatgtttcag gcatcggcga aaaaacagta gagaaattaa aagaatattt ggatgttaat
      601 taataaaagt ggttgacgaa cttccttcta aacacctata ctaatattta tcaaatcata
      661 agggagtttt taatgtgcag agaatcgcat gggatcagtt ttttatggcg caaagtcatc
      721 taatatcatc taggagcacg tgtacacgac taatggtcgg tgcgacaata gttcgagata
      781 aacgtattat tgcgggcgga tataatgggt ccatcgctgg tggcgatcat tgtgcagaac
      841 acggctgtta tgttgtagac ggtcactgca ttcgaacaat acatgcagag atgaacgcga
      901 ttttacaatg tgctaaattt ggtgcaacga cagataaagc tgaattatat gtaacgcatt
      961 tcccttgtct tgcttgtacg aaatctatta ttcaagcagg tataaagaaa gtgtatttcg
     1021 ctaaagacta caaaaaccat ccgtacgctt tagaattatt taacattgct ggcgtcgaat
     1081 tacaaaaagt agaatttgat gaatctgttc ttcaagtaaa caattggaat ggagaaaaaa
     1141 tgcatacttt agtaaaagaa gctgcagtgg aagtaaatat cgaaccagaa aaagcagagc
     1201 aactttatca aaacatctca gagaaattga actaaatagg gaggggacgt tatcgagcga
     1261 tatttagcta ttattgtttt agctattgtt tgtgcgaatt ttacaagctc tatcgttccc
     1321 atatgtattt gtttgctagg tttaattgct tttat
//
LOCUS       DASDYK010000245         1355 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.249, whole genome shotgun sequence.
ACCESSION   DASDYK010000245 DASDYK010000000
VERSION     DASDYK010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1355)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1355)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1355
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.249"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..114)
                     /locus_tag="U0308_003023"
     CDS             complement(<1..114)
                     /locus_tag="U0308_003023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HEM2317967.1"
                     /translation="MIYAQILAGGKGTRMGNVSMPKQFLPLNGKPIIVHTVE"
     gene            338..1225
                     /gene="galU"
                     /locus_tag="U0308_003024"
     CDS             338..1225
                     /gene="galU"
                     /locus_tag="U0308_003024"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEM2317968.1"
                     /translation="MRVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQYIVEEA
                     VASGIEDILIVTGKGKRAIEDHFDSVPELENNLREKNKLELLHLVEQTTNINLHFIRQ
                     AKPKGLGDAILQAKGFVGNEPFIVMLGDDIVESKIPCSKQLMNQYEKTHSSVIGVQTV
                     PHEETYRYGIIDPINEYDKNLYNVKGFVEKPDPANAPSDLAILGRYLLTPQIFDFLET
                     QKPGAGGEIQLTDAINSLNEVQRVFAYDFEGQRFDVGDKFGFIQTTMQFALKHPEIKD
                     DVKDLINDLYNQIHKKDKK"
BASE COUNT          487 a          237 c          221 g          410 t
ORIGIN      
        1 ttcaacggta tgaacaataa ttggtttacc atttagaggt agaaattgtt ttggcatgct
       61 aacgttaccc atccgcgtac cttttcctcc agctaaaatt tgagcgtata tcatcctcta
      121 atctccttta actgtttttt atattgacat gttacattat aacataaaac ttgtataaca
      181 aactagcttc tatctgcgct aagaagtatt ttaattaaac accttgtaaa aacgcatcat
      241 tttataacct aaaccattaa aaacttgtaa acccaaagcc ccctatgtat aattaagtgg
      301 gactatatga atatagatta gaaggagatt attaaatatg agagtaaaaa aagctgtaat
      361 tccagctgct ggtctaggca cgcgcttttt accagcaaca aaagcaatgc ctaaagaaat
      421 cttaccaatt gtggataaac caactattca atacatagta gaagaagcag tagcatctgg
      481 catagaagat attttaattg taaccggtaa aggtaaacgt gctatcgaag accattttga
      541 ttccgttcct gaacttgaaa acaatctacg ggaaaaaaat aaacttgaat tactacattt
      601 agtagaacaa actactaaca ttaatttgca ctttattcgt caagcgaaac caaaaggact
      661 tggtgatgcc atccttcaag caaaaggctt tgtgggtaat gaaccattta tcgttatgtt
      721 aggtgatgat attgttgaat ccaaaatccc ttgttccaaa caattaatga atcaatatga
      781 aaagacgcat agttccgtca ttggagtcca aactgtccct cacgaagaga catatcgtta
      841 tggtattatt gatccaatta atgaatatga taagaattta tataatgtga aaggttttgt
      901 ggaaaaacca gatcctgcta atgcaccgtc tgatttagct atccttggcc gttacttatt
      961 aacaccacaa attttcgact tcttagaaac gcaaaaacca ggtgcaggag gcgaaattca
     1021 actaaccgat gcaatcaata gtctaaatga agtacaacgt gtatttgctt atgactttga
     1081 aggacagcgt tttgatgttg gcgataaatt cggctttatc caaacaacaa tgcaattcgc
     1141 tttgaagcat cctgaaatca aagatgatgt gaaagatctg attaacgact tatataacca
     1201 aattcataaa aaagataaaa aataaaaaaa gagatgacaa atgaaaattt tgtcatctct
     1261 tttttacatg catttaaaag tacagcttgt aacttttggc aataggattt aaagaattta
     1321 aaccaactgc tttatacact gcatttgtcg cacgg
//
LOCUS       DASDYK010000246         1329 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.250, whole genome shotgun sequence.
ACCESSION   DASDYK010000246 DASDYK010000000
VERSION     DASDYK010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.250"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..>1329)
                     /locus_tag="U0308_003025"
     CDS             complement(<1..>1329)
                     /locus_tag="U0308_003025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HEM2317969.1"
                     /translation="KIDGDSFQTFVRCEKEKFQLSYKITTEEEQQKLKKLHYGQFISV
                     SANIETPSVNRNQNQFNYQTYLKNQNVHYILRASNLAISSQFSPSFLMKLQNIRLKII
                     THLTEKISPTISPYCLALISGEKNGFSPEMYEVYQQMGVVHLLAISGLHVNLLIGAIY
                     FLLLKFGITRDRAITCLLVFLPFYVILTGANPPVIRAATMTALLLLSEKYTTKWSSFS
                     AICLSFILFFLLQPYIIREVGFQLSYAVSFGIILSSRQILTRQQNAFTKSLAISFIST
                     IMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIILPGCLTVFVLSFFSTEIFHFPEAML
                     TFFIQLVEKLTYIFAKIPHQTIVTGRPNTVILVLTIITIIIVFSQWQKKKFPLGIFIC
                     FCLLCYLASFNFSGKVSFIDVGQGDSILIQLPYNQGNYLIDTGGQLPFEKE"
BASE COUNT          466 a          200 c          244 g          419 t
ORIGIN      
        1 ttctttttca aatggaagtt ggcctccagt atctattaaa taattccctt gattgtatgg
       61 tagttgaatt aaaatgctat ccccttgccc cacatcgata aaactaactt ttccactaaa
      121 attaaaacta gctaaataac ataataaaca aaaacaaatg aatatcccta aaggaaactt
      181 tttcttttgc cactggctga agacgatgat gatagttata atggttagca ctaatataac
      241 ggtgtttggc ctccctgtta caatagtctg atgcggaatc ttggcgaaaa tgtaggttaa
      301 tttttctacc aattgtataa agaatgtaag cattgcttca ggaaaatgaa atatttctgt
      361 tgaaaaaaaa gacagcacaa acacagttag acaacctggc aaaataatca tcgtaaaaat
      421 gggcacataa attaaattaa agaatatccc tacccatgaa aatgagtaaa aatgatacat
      481 catgacagct gaagacatga tggttgaaat gaaggaaata gcaagtgact tagtaaatgc
      541 gttctgctgt ctggttagta tttgtcttga cgataaaata attccaaacg atactgcata
      601 agatagttga aaacctactt ctctaatgat atacggttgc aagaggaaaa acagaataaa
      661 ggacaaacaa atggcagaaa acgaactcca tttagtagta tatttttctg acaataaaag
      721 taatgctgtc attgtagcag ctcgtatgac tggcggattt gctcctgtaa ggataacgta
      781 aaatggtaag aaaacaagta gacaagtgat ggctctatcc cttgtaatac cgaattttag
      841 taggagaaaa tatattgccc ctattaataa attcacgtga agtccagaga tagctagcaa
      901 atggacaaca cccatttgtt gataaacttc atacatttcg ggggaaaagc cgtttttctc
      961 tccactaatt aatgcgagac aataaggaga aatggttgga gatatttttt cggttaaatg
     1021 ggtaattatt ttcaaacgta tattttgaag tttcattagg aaagatggtg agaattgact
     1081 ggaaatagca agattacttg ctcgaagtat atagtgtaca ttttggttct ttaaataagt
     1141 ttggtaattg aattgatttt gattgcggtt gacggaaggt gtttctatat ttgcagaaac
     1201 agaaataaac tgtccgtaat ggagcttttt tagtttttgt tgttcctctt ccgttgtaat
     1261 tttataactc aattgaaatt tttctttttc gcagcgtaca aaagtttgaa aactatctcc
     1321 atcgatttt
//
LOCUS       DASDYK010000247         1309 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.251, whole genome shotgun sequence.
ACCESSION   DASDYK010000247 DASDYK010000000
VERSION     DASDYK010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.251"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            328..801
                     /locus_tag="U0308_003026"
     CDS             328..801
                     /locus_tag="U0308_003026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317970.1"
                     /translation="MTFLNTLKLNLENEKKRMLSDAFMKKQEGIIVNYIVTCSKDSAI
                     GISKKAIDILLIINENTFPEWPNVDRWLSILPKYFTDSFSKSKILHSEDWLFEEWLYW
                     FEPENRFWFLGELDPVDNEHLKISIVVQEHPFPVESLEVLLMKLGTSELHEIGME"
     gene            907..1269
                     /locus_tag="U0308_003027"
     CDS             907..1269
                     /locus_tag="U0308_003027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012581428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317971.1"
                     /translation="MENYVSIVKIENNLSVCFYNSSEKVVAIAKKMNEINEEAYMHGY
                     NWEAFFNYYLPKYAPDVLEGMGSDPEAGMYVAYYTLSPETEARAEKLVQVITNLIENE
                     ELLYQIIENEGNNISWDN"
BASE COUNT          487 a          169 c          244 g          409 t
ORIGIN      
        1 atgtttcacc agtctccata ggagtgtggt agctgattgc acagtaatta tatactttac
       61 gtcaatatca aaagcaagtc caattaaaat ggattacctt gccccgtaaa tgacaacttc
      121 tgaaaatagg taaaaggaac aaaagatgat gtaattaggg tctagtgcat ttgtggtgaa
      181 tttaggtttt gattataatg agaatctccg tttagaggtt gttcttttga aaacgataga
      241 agcaattata ggtatcgact accatatatt actgaaaaaa gagctagatt aaataaaaaa
      301 ataattctaa catcatagga ggcaattatg acttttttaa acaccttaaa attaaatttg
      361 gaaaatgaaa aaaagagaat gttatccgat gcttttatga aaaaacaaga aggaatcatt
      421 gtaaactata tagtgacttg cagtaaggat tctgctattg gcattagtaa aaaggcaatt
      481 gatatattat tgataatcaa tgaaaataca tttcctgaat ggccaaatgt agatagatgg
      541 ctttctattt tgccaaaata ttttacggat tctttttcaa aatcaaaaat attgcatagt
      601 gaagattggc tatttgaaga gtggttatac tggtttgaac ctgaaaatag attttggttt
      661 ttaggagaat tagatcctgt tgataatgag catttgaaaa taagcatagt tgtacaagaa
      721 cacccttttc cagtagaatc attagaagtt ctacttatga agctaggaac aagcgaatta
      781 catgaaattg gtatggaatg aggttaaatg tacttttaac ggatatatct tttacaatag
      841 agctgaattt tgttagagtt taaaatgaaa aaacaactaa gttataacga aaggagctaa
      901 cacttgatgg aaaattacgt gtcaatagta aaaatcgaaa acaatctttc cgtgtgcttt
      961 tacaacagct cggagaaagt agtagcaatt gctaagaaaa tgaatgagat taacgaagaa
     1021 gcttatatgc atggttacaa ttgggaagca tttttcaact actatttacc taaatatgct
     1081 ccagatgtct tagaaggaat gggctctgat ccggaagcgg gaatgtatgt ggcgtattac
     1141 acgctatcac ctgaaactga ggcacgagca gaaaaacttg ttcaagtaat tacgaatctc
     1201 atcgaaaatg aagaactact ttatcaaata attgaaaatg aaggcaataa tattagttgg
     1261 gataattaat cctttttcta aaaaatcctt atctatttgt tcgtatagt
//
LOCUS       DASDYK010000248         1309 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.252, whole genome shotgun sequence.
ACCESSION   DASDYK010000248 DASDYK010000000
VERSION     DASDYK010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1309
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.252"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1257
                     /locus_tag="U0308_003028"
     CDS             <1..1257
                     /locus_tag="U0308_003028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2317972.1"
                     /translation="WIDKRALTIYPYDSIISSKNVNLDGQITNPTGNGIWTKAYKLEG
                     TTSVAQATKYANKDVKISQQIETQHGTYYNISIDGKAIGWLDRNAITLYDQEEYNKTV
                     AIDAVVKNVKGNAVWTEPYRTVGTKLIGPAETYLNKEVEVVREAKTPKGTYYQFKSGG
                     KVIGWLDKKAFDVYDNINYNKAVNLDAVVENVTGNAVWTAPYKSKGIKLVTSAATYKG
                     KATKITREAQTSRGTYYEFSVDGKVIGWLDKKAFDVYDNINYNKAVNLDAVVENVTGN
                     AVWTAPYKSKGVKLVTSAATYKDKATKITREAQTSRGTYYEFSVNGKVIGWLDKKAFD
                     VYDSIEYNKAINMTGLLSNAPGNGIWTEPYRVIGTKNVGQATAYANKTVQLIREAKTT
                     RATYYQMSVNGKIVGWVDKRAFTNVK"
BASE COUNT          495 a          198 c          277 g          339 t
ORIGIN      
        1 tggattgata aacgagctct cactatctat ccgtatgatt ccattatttc aagtaaaaat
       61 gtgaaccttg acggacaaat tactaatcca accggaaatg gtatttggac taaagcgtac
      121 aaacttgaag gaacaacttc tgtggcgcag gctacgaaat atgcaaataa agatgtgaaa
      181 atcagccaac aaatcgaaac tcaacatggt acttattaca atatcagtat cgatgggaaa
      241 gcaattggtt ggttagatag aaacgctatt acactgtatg atcaagagga atacaataaa
      301 acagttgcta ttgacgcagt agtaaaaaat gtgaagggta atgctgtatg gacagaacct
      361 taccgtacag ttggtacaaa attaatcgga ccagcggaaa cttacttgaa taaagaagtg
      421 gaagtcgtcc gtgaagcaaa aacgccaaaa ggaacttact accaatttaa atctggtggc
      481 aaagtaatcg gctggttaga taaaaaagct ttcgatgtat atgacaatat taattacaac
      541 aaagcggtta atttagatgc tgtagtggaa aatgtgacag gtaatgcagt ttggacggct
      601 ccttataaga gtaaaggaat taaacttgtt acttcagcag caacctataa aggcaaggca
      661 acaaaaataa ctcgtgaagc gcaaacaagt agaggaacat attacgagtt tagtgttgat
      721 ggtaaagtca ttggctggtt agataaaaaa gctttcgatg tatatgacaa tattaattac
      781 aacaaagcgg ttaacttaga tgctgtagtg gaaaatgtga caggcaacgc agtttggact
      841 gctccatata agagtaaggg tgttaaatta gttacttcag cagccacata taaagataaa
      901 gcaactaaaa taactcgaga agcgcaaaca agtagaggaa cttactacga atttagcgta
      961 aacggcaaag taatcggttg gttagataaa aaagcttttg atgtatatga ttctattgag
     1021 tacaataaag cgattaatat gactggatta cttagcaacg cgccaggtaa tggcatttgg
     1081 acagagccgt atagagttat tggcacaaaa aatgtaggac aagcaactgc ttatgctaac
     1141 aagacagtac agttgatacg cgaggctaag actacacgtg caacttacta tcaaatgagt
     1201 gtaaatggta aaatagttgg ttgggtagat aaacgagctt ttacaaacgt taaatagact
     1261 aaaaataatc atataaaaac agagtgagat ttctcactct gtttttata
//
LOCUS       DASDYK010000249         1295 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.253, whole genome shotgun sequence.
ACCESSION   DASDYK010000249 DASDYK010000000
VERSION     DASDYK010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.253"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..163)
                     /locus_tag="U0308_003029"
     CDS             complement(<1..163)
                     /locus_tag="U0308_003029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317973.1"
                     /translation="MTSGHQFKRFTMIIIVLIIAIAAAVFFFWQVDAEEQAPKVSKTE
                     LIESNKVWIN"
     gene            complement(311..1243)
                     /locus_tag="U0308_003030"
     CDS             complement(311..1243)
                     /locus_tag="U0308_003030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEM2317974.1"
                     /translation="MQKHARVIYNPTSGREIIKKNLADVLSILEQAGYVTSAHATTAE
                     PDDAKHAAEEAVRDRFDLVVAAGGDGTINEVINGIAEKEYRPKVGIIPTGTTNDFARA
                     LHVPRDVIKATKIIAAGQSVAMDIGKANETYFINIGGGGRLTELTYDVPSRLKTMLGQ
                     LAYYLKGIEMLPSLKATKVKVEYDQGVFEGEVMFFLLGLTNSIGGFEKIAPDAKLDDG
                     KFSLIIVKKVNLAEFIRLVTLALRGDHIKEPNVIYVKSEKVIVNSEDKMLINLDGELG
                     GETPMEFRNLRQHIEFFASVDDIPATDLFIKENS"
BASE COUNT          359 a          271 c          210 g          455 t
ORIGIN      
        1 tgtttatcca tactttatta ctttcaatta gctctgtttt acttactttt ggagcctgtt
       61 cttctgcatc cacttgccaa aagaaaaaaa cagccgctgc gatagcaatg ataagaacga
      121 ttattatcat cgtgaacctt ttaaattgat gtccacttgt catatcgcat tcacctcatt
      181 tcttgtcaga atacctatta tacttgtttt gctcaaataa gacaaatttc taacaataat
      241 tacatccttt ttactatgtt gcaattagga cgtttaggct aaagaaaaaa actaccaaac
      301 tgggcagttt ttagctattt tcttttatga ataaatcagt tgcggggatg tcatctacac
      361 ttgcgaaaaa ttcgatatgt tgtcttaaat tgcggaattc cattggcgtt tccccaccaa
      421 gctccccgtc aaggttaatt aacatcttat cttctgagtt aacaatcact ttttcggatt
      481 ttacataaat aacattaggt tctttaatat gatctcctcg aagcgccagt gtgactaaac
      541 ggataaattc ggctaaattt acttttttca cgataataag tgaaaattta ccgtcgtcta
      601 acttggcatc tggggcgatt ttttcaaagc caccaatgga attagttaat cctaatagga
      661 aaaacatcac ttccccttca aatacgcctt gatcatattc tacttttact ttggttgctt
      721 ttaaggatgg taacatttcg atacctttta aataataagc aagttgaccg agcattgttt
      781 ttagacggct aggaacatcg taagtgagtt ctgttaaacg acctccgcca cctatattaa
      841 taaaatatgt ttcatttgct ttacctatat ccattgctac actttgacca gctgctataa
      901 tcttcgttgc tttaatcacg tctctaggca catgtaaggc tcttgcaaaa tcattggttg
      961 tcccggttgg tataatccct actttggggc gatattcttt ttcagcaata ccgttaataa
     1021 cttcattaat ggttccatct ccgccagctg ctacaactaa atcgaatcga tctcttacag
     1081 cttcttccgc agcatgtttg gcatcatctg gttctgcagt tgttgcgtgc gcagatgtta
     1141 catagcctgc ttgctctaat atcgaaagga catctgcaag atttttcttg atgatttctc
     1201 ttccagatgt gggattataa ataactcgag cgtgtttttg cattatgttc gtcctctcct
     1261 tcactcaaac agcgttgttc aaaagaaaag cgcgt
//
LOCUS       DASDYK010000250         1276 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.254, whole genome shotgun sequence.
ACCESSION   DASDYK010000250 DASDYK010000000
VERSION     DASDYK010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1276
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.254"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..355
                     /locus_tag="U0308_003031"
     CDS             <1..355
                     /locus_tag="U0308_003031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEM2317975.1"
                     /translation="QSNLSRTIIKDRLIEKGYIVVSFELYETIFPENSKIRLIEQLKL
                     NETQIIVFASPSAWKNFYSTAKSFPAQKEKWHIASIGSITTEAIIADGWEVKYQPKTF
                     TMKHLADLIIQEELK"
     gene            352..>1276
                     /gene="hemB"
                     /locus_tag="U0308_003032"
     CDS             352..>1276
                     /gene="hemB"
                     /locus_tag="U0308_003032"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEM2317976.1"
                     /translation="MKNQFDRHRRLRKTKTMRDLVRETVLHTDDLIYPIFVKDGKEPK
                     TEVASMPGVFQYPLHELEEEMRVVESLGIKAVILFGIPAEKDAVGTQAYHDHGIIQEA
                     TRLIKKSFPEILVVADTCLCEFTDHGHCGVIENGEILNDESLELLKQTAVSQAAAGAD
                     IIAPSNMMDGFVQVIREGLDEAGFYDIPIMSYAVKYASAFYGPFRDAAGSAPQFGDRK
                     SYQMDPANREEALREAMSDEQEGADFLIVKPSLSYLDIMRDVKNNTNLPVVAYNVSGE
                     YAMVKAAAQNGWIDEEKIVLEMLTSMKRAGAT"
BASE COUNT          440 a          212 c          262 g          362 t
ORIGIN      
        1 acaaagtaat ttaagcagaa caataataaa agatagattg attgaaaaag gttacatcgt
       61 tgtttcgttt gagctctatg aaacaatctt tccagaaaat tctaaaatac ggttaatcga
      121 acaactgaaa ctaaatgaaa cacaaataat tgtttttgcc agcccatctg catggaaaaa
      181 cttctattcc actgcgaagt cattccctgc tcaaaaagag aagtggcata ttgcatccat
      241 tggtagtatt acaacagaag ccattatagc agatggatgg gaagtaaaat atcaaccaaa
      301 aaccttcacc atgaagcacc tagctgattt gataatacag gaggaattaa aatgaaaaat
      361 caatttgata gacatcgtcg tctaagaaaa accaaaacaa tgcgtgattt agtaagagaa
      421 acagttttac atacagatga tttaatctat ccgatttttg ttaaagatgg caaagaacca
      481 aaaacagaag tagcttctat gcctggggtt tttcaatatc ctttacatga actagaagaa
      541 gaaatgcgcg tagttgagag ccttggtatt aaagcggtta ttttatttgg tattcctgcc
      601 gagaaagacg cagttggcac gcaagcttat cacgaccacg gaattattca agaagctaca
      661 aggcttataa aaaaaagttt tcctgaaatt cttgtggtgg ctgacacatg tttatgtgaa
      721 tttactgatc atggacattg tggtgttatt gaaaacgggg aaattctcaa tgacgaatcg
      781 cttgaattat tgaaacaaac agctgtcagt caagccgctg caggagcgga tatcattgct
      841 ccatctaata tgatggatgg ttttgttcaa gtcattcgcg aagggttaga tgaagcggga
      901 ttttatgata tcccaattat gtcatatgca gttaaatatg cgtctgcttt ttatggaccg
      961 ttccgtgatg ctgctggtag tgcccctcaa tttggtgata gaaaatctta tcaaatggat
     1021 cctgccaatc gtgaagaagc tcttcgcgaa gcaatgtcgg atgaacaaga aggtgcagat
     1081 ttccttattg ttaaaccatc attatcatac ttagatatca tgcgcgatgt taagaacaat
     1141 accaatttac cagtagttgc ctacaatgtt agtggtgaat atgcaatggt aaaagcagct
     1201 gcgcaaaatg gttggataga tgaagaaaaa attgttttag aaatgctaac aagtatgaaa
     1261 cgagcgggtg caacac
//
LOCUS       DASDYK010000251         1235 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.257, whole genome shotgun sequence.
ACCESSION   DASDYK010000251 DASDYK010000000
VERSION     DASDYK010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.257"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>1235
                     /locus_tag="U0308_003033"
     CDS             <1..>1235
                     /locus_tag="U0308_003033"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317977.1"
                     /translation="NNKKVRVTRKDYGKTYRIRTVVNNSTHTSYKVYLNGIYQGYIDY
                     RALHKINFIDYTNKNITAYGEYKNRKLGTGIFKIEKESRNDLGSMYQINKNNKKVLVN
                     QSDISVIYKPGMEQKATGLKQVKNPNGYFYSHPTDGASLTNQKVSLYQNRYLNVNAKA
                     TVKGETWYRVWINQHDGQRWTNPVLGWAKESNLKNPNDTTNNFKLTFNVEEKTNQQGL
                     TYNEGVYYIAFDLSNVGYPNHSKIIAYDHTGKKLKETSPLPIGHGAELNYYKGKIYAS
                     NGGGKDGAKVFVVDFENNRVDDVIDLSQYGTNALATVKDDDTIILHTSVDSNKIHTFT
                     IVDMKGNLKNQFTIENAWVPQGIAYYDGVIYFYTNNLITKINENGKVLGQEYLSLKGE
                     SEGIEVNKESGKIIVGYNG"
BASE COUNT          507 a          166 c          220 g          342 t
ORIGIN      
        1 aataataaga aagtaagagt aacgagaaaa gattatggaa agacttaccg tattagaaca
       61 gtcgttaata actccactca cacatcgtat aaagtatatc tgaatggtat atatcaaggc
      121 tatatcgact atagagcttt gcataagata aactttattg actatacgaa taaaaacatt
      181 actgcgtatg gtgaatataa aaatagaaaa ttaggaactg gaatctttaa aattgaaaaa
      241 gaaagcagaa atgatttagg cagcatgtat caaattaata aaaataataa aaaagtacta
      301 gttaatcaga gtgacatttc ggtcatttat aagccgggaa tggaacaaaa agcaactgga
      361 ttgaagcaag tgaaaaatcc taatggctat ttttatagcc atcctactga tggagcttct
      421 ctaacaaatc aaaaagtaag cctatatcaa aataggtatc ttaatgtaaa tgcgaaagca
      481 acagtaaaag gtgaaacatg gtacagagtt tggattaatc aacatgatgg tcaaagatgg
      541 acaaatccag ttttaggatg ggcaaaagag tcaaatctta aaaatcctaa tgataccact
      601 aataacttta aacttacatt taatgtagaa gaaaaaacga atcaacaagg cttaacatat
      661 aatgaaggtg tctattatat agctttcgac ttatcaaatg tgggctatcc gaatcactca
      721 aaaattattg catatgatca cactggaaag aaactcaaag agacatcacc acttccaatt
      781 ggacatggag ctgaacttaa ttattacaaa ggtaaaattt atgcctcaaa tggtggtggt
      841 aaagatggag caaaagtttt tgtagtagat tttgagaaca accgcgtgga cgatgtaata
      901 gacttatctc aatatggtac aaatgcgtta gctactgtaa aagatgatga tacgattatt
      961 ttacatactt ctgtagatag taataaaatt catacattta ctatagttga tatgaaaggt
     1021 aaccttaaga atcaatttac aatagaaaat gcctgggttc cacaagggat agcttattac
     1081 gatggagtta tctatttcta taccaacaat ttaataacaa aaatcaacga aaatggcaag
     1141 gtcttaggcc aagaatattt atctttaaaa ggtgaatcag aaggtataga agtaaacaaa
     1201 gaaagtggta aaataattgt tggttacaat ggaaa
//
LOCUS       DASDYK010000252         1214 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.258, whole genome shotgun sequence.
ACCESSION   DASDYK010000252 DASDYK010000000
VERSION     DASDYK010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1214)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1214)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1214
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.258"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            81..731
                     /locus_tag="U0308_003034"
     CDS             81..731
                     /locus_tag="U0308_003034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317978.1"
                     /translation="MNNRNWLKGLGVTMIAATLILTGCGNGDAEKTDTKEQTKSVEEE
                     GKKVKIESNEGKPQHEQLITVKLPPEADYLNDETLEVYEQDKKKYDQTEQLITNDSIT
                     LLIGDYGYYDPVQDAIECSAVIVNGTKTEIKDLSFQVSIENNVMQGRVFLDNSVPELT
                     KEQTGNFKPSMGIPVILGFPEEKPTDEIENGRKIDTKNIKINLSDIQYKVVEQEGK"
     gene            731..1045
                     /locus_tag="U0308_003035"
     CDS             731..1045
                     /locus_tag="U0308_003035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin B"
                     /protein_id="HEM2317979.1"
                     /translation="MGEEIKIDPHFLKKVENNVNSYIKAQKEVSIALLAVRNNLASNF
                     SGVACNEIKNYITELMNDLEKEFGVFITKNHEKVKALEESYKELDSQLGQTFNYGMER
                     TK"
BASE COUNT          516 a          133 c          256 g          309 t
ORIGIN      
        1 tttctaaagt attgaaggga agcacgaatt aacagtatca aaattaatag aataagacat
       61 aaaaaataag aggttacaac atgaataata gaaattggtt aaaaggatta ggagtaacaa
      121 tgattgccgc cactttaatt ttaacgggat gcggaaatgg agacgctgaa aagacagata
      181 caaaggaaca gactaaaagt gttgaagaag aaggaaaaaa agtaaagatt gagagtaatg
      241 aagggaaacc acagcatgaa cagcttataa cagtgaagtt gccgccagaa gcagattatt
      301 taaatgatga aacgttagaa gtgtatgagc aagataaaaa gaagtatgac cagacagagc
      361 aactaattac taatgattca atcacattac taatcggaga ctatggatat tatgatcctg
      421 tgcaggatgc tatagaatgt tctgctgtaa tcgtaaatgg tacaaaaaca gaaattaaag
      481 atcttagttt tcaagttagt attgagaaca atgtaatgca aggtagggta tttttggaca
      541 attcagtacc ggaacttaca aaagaacaaa caggaaattt taagcctagt atgggtatac
      601 cggtaatttt agggtttcca gaagaaaaac cgacagatga aatcgaaaat ggtagaaaaa
      661 tcgacactaa aaacataaaa attaatttaa gtgatattca atataaggtt gtagaacagg
      721 aggggaaatg atgggagagg aaattaaaat agatcctcat tttttgaaaa aggtggagaa
      781 taatgtaaat agttacatta aggctcaaaa agaagtttct attgcattac tagcagttag
      841 aaacaactta gcgagtaatt tttcaggtgt tgcttgcaat gaaataaaaa attatataac
      901 agaattaatg aatgatttag aaaaagaatt tggtgtcttc attacaaaga atcatgaaaa
      961 agttaaggcg ttagaggaaa gttataaaga acttgatagt cagttaggac agacctttaa
     1021 ttatggaatg gagagaacaa aatgagtaga aaaatacatc taaaaacttt ttaaaagaaa
     1081 gcggaataaa aacatggctg atttaaaggg agtatagcaa atcctcaata aggagcaatt
     1141 gtaaaggttt ttgatgcagt tggaggaaaa caaatccagt ttgacacctc agtgagatga
     1201 tatgagaaat taca
//
LOCUS       DASDYK010000253         1207 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.259, whole genome shotgun sequence.
ACCESSION   DASDYK010000253 DASDYK010000000
VERSION     DASDYK010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1207
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.259"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>1207
                     /locus_tag="U0308_003036"
     rRNA            <1..>1207
                     /locus_tag="U0308_003036"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          310 a          280 c          383 g          234 t
ORIGIN      
        1 gaaggaaatt aagtacggaa gttcctgatt tcacgctgtc aagaaaagcc tctaggaaga
       61 gtagtactgc ccgtaccgca aaccgacaca ggtagatgag gagagaatcc taaggtgagc
      121 gagagaactc tcgttaagga actcggcaaa atgaccccgt aacttcggga gaaggggtgc
      181 tctattaggg tgcaagcccg agagagccgc agtgaatagg cccaggcgac tgtttagcaa
      241 aaacacaggt ctctgcaaaa ccgtaaggtg acgtataggg gctgacgcct gcccggtgct
      301 ggaaggttaa gaggagtgct tagcttcggc gaaggtacga attgaagccc cagtaaacgg
      361 cggccgtaac tataacggtc ctaaggtagc gaaattcctt gtcgggtaag ttccgacccg
      421 cacgaaaggc gcaacgatct gggcactgtc tcaacgagag actcggtgaa attatagtac
      481 ctgtgaagat gcaggttacc cgcgacagga cggaaagacc ccgtggagct ttactgcaac
      541 ctgatatgga atgtttgtac cgcttgtaca ggataggtag gagccgaaga gacgtgtgcg
      601 ctagcatacg aggaggcaat ggtgggatac taccctggct gtatgaccat tctaacccgc
      661 cacgcttagc gcgtggggag acagtgtcag gtgggcagtt tgactggggc ggtcgcctcc
      721 taaagagtaa cggaggcgcc caaaggttcc ctcagaatgg atggaaatca ttcgcagagt
      781 gtaaaggcac aagggagctt gactgcgaga ctgacaagtc gagcagggac gaaagtcggg
      841 cttagtgatc cggtggttcc gcatggaagg gccatcgctc aacggataaa agctaccccg
      901 gggataacag gcttatctcc cccaagagtc cacatcgacg gggaggtttg gcacctcgat
      961 gtcggctcgt cgcatcctgg ggctgtagtc ggtcccaagg gttgggctgt tcgcccatta
     1021 aagcggcacg cgagctgggt tcagaacgtc gtgagacagt tcggtcccta tccgtcgcgg
     1081 gcgcaggaaa tttgagagga gctgtcctta gtacgagagg accgggatgg acacaccgct
     1141 ggtgtaccag ttgttccgcc aggagcatcg ctgggtagct atgtgtggca gggataaacg
     1201 ctgaaag
//
LOCUS       DASDYK010000254         1184 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.260, whole genome shotgun sequence.
ACCESSION   DASDYK010000254 DASDYK010000000
VERSION     DASDYK010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1184)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1184)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1184
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.260"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..189)
                     /locus_tag="U0308_003037"
     CDS             complement(<1..189)
                     /locus_tag="U0308_003037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317980.1"
                     /translation="MKKSWPDFAAFLLTILTVTWIILTWGLHISDIVPGGEKGVWYKL
                     IPLFLGIISTISVFFVKEK"
     gene            complement(275..1015)
                     /locus_tag="U0308_003038"
     CDS             complement(275..1015)
                     /locus_tag="U0308_003038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEM2317981.1"
                     /translation="MDIITYFLIALSTSVVGSFLGIGGGVILLPILLLMGVSQGTAAF
                     SSALTVFTMAIFTCSIYYKRKQGNVGLALKIAVTSIPTTFLGAMVNQMLPEAVYRFLY
                     GALIVVLLGIMIWKKKRHNEKPHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPIL
                     LLIFMLNQKTASATSSYVTLLTSLASIGSYAIIGGSDFSIGIYMIPGAIIGALIGTRL
                     NKLLDEKWIAILFNVLLIALFALNLIKI"
     gene            complement(1112..>1184)
                     /locus_tag="U0308_003039"
     CDS             complement(1112..>1184)
                     /locus_tag="U0308_003039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1398 domain-containing protein"
                     /protein_id="HEM2317982.1"
                     /translation="SAMKVTYIDNTGNDLIVEPIPSI"
BASE COUNT          409 a          250 c          168 g          357 t
ORIGIN      
        1 tttttctttc acaaaaaaga cacttattgt tgaaattatt cctaaaaaga gtggaattaa
       61 tttataccaa acgccttttt ctcctcctgg tacaatgtca gaaatatgta atccccatgt
      121 taatattatc caagttacag ttaggattgt cagtaaaaat gcagcaaaat ctggccaact
      181 ttttttcatc ttaaaccctc ctactctctc taagcttaac ataaaacaag ccatgacaac
      241 aaaaaaacaa gctacattca tagcttgtcc gaggttaaat cttaattaaa tttaaagcaa
      301 aaagggcgat aagtaaaaca ttgaatagaa tcgcaatcca tttttcatcc aggagtttat
      361 ttaatcttgt gccaattagc gcaccgatga ttgcccctgg tatcatgtaa ataccaatcg
      421 aaaagtcact tccaccaatg attgcatagg aaccgatact tgcaagggac gtcagtaatg
      481 tcacataact ggatgtcgcg gatgccgttt tttgattcaa catgaaaatt aacagcaaaa
      541 ttggtataac gattggcccg ccaccaatac caaataagcc agctaaaaaa ccgataatta
      601 caccgaatac atatggaatt atccgatatt cacttaaaaa atgtggtttt tcattatgcc
      661 gtttcttttt ccaaatcatt atccctagta aaacaacgat taatgctccg tacaaaaagc
      721 gataaactgc ttctggcaac atttgattca ccattgcgcc aagaaaagtc gtcgggatac
      781 tagttacggc aattttcagt gccaagccta cattcccttg ctttctcttg taataaatac
      841 tacaagtgaa aatcgccatc gtgaacacag taagagccga actaaatgct gctgttcctt
      901 gagaaacacc cattaagagt agaattggca aaagaataac tccgccacct attcctaaaa
      961 aactccctac cacacttgta cttagtgcaa ttagaaagta cgtaattata tccattatac
     1021 tttacctctc ttctttcaac tgtttcagca taacatattt ccaaaattta aaagtactaa
     1081 aaaaagacaa taagttattg tcttttgcat tttaaatact cggaatcggt tccacgatca
     1141 aatcatttcc cgtattatct atataggtta ctttcattgc agat
//
LOCUS       DASDYK010000255         1173 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.261, whole genome shotgun sequence.
ACCESSION   DASDYK010000255 DASDYK010000000
VERSION     DASDYK010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1173
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.261"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..335
                     /locus_tag="U0308_003040"
     CDS             <1..335
                     /locus_tag="U0308_003040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA topology modulation protein"
                     /protein_id="HEM2317983.1"
                     /translation="GVHLEAWVDESINQADVVIFLDLPKKQIRSQIIKRQIKQLIRLE
                     AAHYPIRFNMLKKMFYWDDLFDQRTKPLIARKMAQNPTKWLIIKEKTVFQEIKNGVLQ
                     IISSRDIL"
     gene            366..677
                     /locus_tag="U0308_003041"
     CDS             366..677
                     /locus_tag="U0308_003041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEM2317984.1"
                     /translation="MNEKLRKAYLPMTETAFYILLSLVKPRHGYAIIENVAKMTDDRI
                     KLGPGTIYGSLSKMNKDNLIQIIQEESNRKIYQITEIGTDILQLEKARIEELYRNSRE
                     V"
     gene            680..>1173
                     /locus_tag="U0308_003042"
     CDS             680..>1173
                     /locus_tag="U0308_003042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2812 domain-containing protein"
                     /protein_id="HEM2317985.1"
                     /translation="MEKKVVKFFTVDNMEKEEAYLNEMAQNGWFFQKYKSFRYHFKQG
                     EPAKYSYAIDFKENEGDEDAYKTLFEDAGWETVFSYPVLNGNWMYFRKAVAPGETEEA
                     IFTDETSLIQLYKNIRKRWTIFGAIVSLFLLIELLIVFQMENNIGITTFIFIIFLILV
                     ALYG"
BASE COUNT          426 a          190 c          223 g          334 t
ORIGIN      
        1 aaggcgttca tttggaagca tgggtggacg agagcattaa ccaagcggac gtggttattt
       61 ttcttgattt acctaaaaaa caaatccgct cccaaattat taagcgccaa attaaacaat
      121 taatacgatt agaagcagct cattacccaa ttcggttcaa catgttaaag aaaatgtttt
      181 attgggacga tttatttgac caacgaacaa aaccactaat tgctagaaaa atggcccaaa
      241 atccaacaaa atggctaatt atcaaagaaa aaacggtatt tcaagaaata aaaaatgggg
      301 tattgcaaat tatatcgagc cgtgatatat tataagcatc aaatacatcg aggtgcgata
      361 tagttatgaa tgaaaaatta cggaaagcct atcttccaat gaccgaaacc gctttttaca
      421 tattactatc gctcgtcaaa ccaaggcacg gttacgcgat tatcgaaaac gtcgcaaaga
      481 tgacagatga tcgaatcaag cttggtcccg ggactattta cggaagctta tccaaaatga
      541 acaaagataa tttgatccaa attattcaag aagagagtaa tcggaaaatc tatcaaatta
      601 ctgaaattgg cacagatatt ttgcaattag aaaaagcgcg catcgaagaa ttgtatagaa
      661 actcaaggga ggtctaataa tggagaaaaa agtcgttaag ttttttaccg tggacaatat
      721 ggagaaagaa gaagcctatt taaatgaaat ggcacaaaat ggttggttct ttcaaaaata
      781 taaatctttt agatatcatt tcaaacaggg agagcctgcg aaatacagct atgcgattga
      841 tttcaaagaa aatgaaggag acgaagatgc ctacaaaaca cttttcgaag atgctggctg
      901 ggagactgtt tttagctatc cagtattaaa tggcaattgg atgtatttcc gcaaagctgt
      961 agctcctgga gaaacagagg aagctatttt cactgacgag acttccctaa ttcaacttta
     1021 caaaaatatc cgcaaacgtt ggacgatttt tggtgcgata gtgagtttgt ttttacttat
     1081 tgaattgtta atcgtgtttc aaatggaaaa caatattgga attactacat tcatctttat
     1141 tatttttctt attcttgttg cactatatgg taa
//
LOCUS       DASDYK010000256         1125 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.262, whole genome shotgun sequence.
ACCESSION   DASDYK010000256 DASDYK010000000
VERSION     DASDYK010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1125
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.262"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..383
                     /locus_tag="U0308_003043"
     CDS             <1..383
                     /locus_tag="U0308_003043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2975 domain-containing protein"
                     /protein_id="HEM2317986.1"
                     /translation="TEFFSGVENQQYNQIEEWILVVIAAFSSVLIALLLWTASMIFKD
                     LAAEFMPFSDLTVNRLRRIAGILLVYSLAPQIMYSVLHTVLIPGYSITFGLNMSFFFA
                     IIFYCLTEIFRYGASLQKESDETL"
     gene            398..625
                     /locus_tag="U0308_003044"
     CDS             398..625
                     /locus_tag="U0308_003044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2317987.1"
                     /translation="MAIVLRLDRVMADRKMSLNQLSQEVGVANVNLSKIKTGKVSAIR
                     FSTLNEICRVLNCQPGDILEYVADDSLETEL"
     gene            665..>1125
                     /locus_tag="U0308_003045"
     CDS             665..>1125
                     /locus_tag="U0308_003045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2317988.1"
                     /translation="MNKQNELQSVLSNKKKVLIIGPNGAGKSTFAAKLGKCYDFEVCH
                     LDKLFWLENWNAVEKADFEDKVNGILRSEKKYIIDGDYFFNLEKRLEHADLVIWIKIP
                     LFLCVANIVKRRFKYMTNARPDVTEGCDEKLNLSFLLYALKYNKRSGKQTK"
BASE COUNT          376 a          148 c          224 g          377 t
ORIGIN      
        1 aaacagaatt tttttctggt gtggaaaatc aacaatataa tcaaattgag gaatggattt
       61 tagtagttat agctgctttt tctagtgttt taatagcatt gctactatgg accgcaagta
      121 tgatttttaa agatttagct gctgagttta tgccttttag cgatcttact gttaacagat
      181 tgcggagaat tgcagggata ttgcttgtct attcgctagc accgcaaatt atgtattctg
      241 ttttacatac agtactcata ccgggttata gcattacttt tggtttgaat atgtcatttt
      301 tctttgcaat tattttttat tgtttaactg aaatatttcg ttatggagca tctttgcaaa
      361 aagaatccga cgaaacttta tgattggagc gaaaaaaatg gcaattgtat tgaggctaga
      421 tcgagtaatg gccgaccgta aaatgtcttt aaaccagtta tcccaagaag ttggtgtagc
      481 aaatgtaaac ttatccaaaa taaaaactgg taaagtaagc gccattcgtt tttctactct
      541 aaatgaaata tgtagagtct taaactgcca accaggtgat attttggagt atgtagcgga
      601 tgattctctt gaaaccgaac tttaaatgcg ttagattagc catacttaga taaggagcgc
      661 gtaaatgaat aaacaaaatg aattgcaatc tgtattatct aacaagaaaa aagtattaat
      721 aattggtcct aacggcgctg gtaagtcaac ttttgctgca aaacttggaa aatgttatga
      781 ttttgaagtc tgtcatttag ataagctttt ttggctggag aattggaatg cagttgaaaa
      841 agcggatttc gaggataaag tgaacggaat tctgcgttct gaaaaaaagt atattataga
      901 tggtgattat ttctttaatt tggagaaaag actcgaacat gcagatttag ttatttggat
      961 aaaaattcca ttgtttctgt gtgtagcaaa tatagttaaa agaagattta aatacatgac
     1021 gaatgcgcga ccagatgtaa ctgaaggctg tgacgaaaaa ttaaatttat catttttgct
     1081 gtatgcttta aagtataata agcgttctgg aaaacaaacg aaaga
//
LOCUS       DASDYK010000257         1120 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.263, whole genome shotgun sequence.
ACCESSION   DASDYK010000257 DASDYK010000000
VERSION     DASDYK010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1120)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1120)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1120
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.263"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            77..838
                     /locus_tag="U0308_003046"
     CDS             77..838
                     /locus_tag="U0308_003046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317989.1"
                     /translation="MDEFKLDKTISKAIVDGTLKGYLQYLEERKSKKETMNVSGAYAW
                     TKGNHIDDQVSKIGQMKNVQFKIEKAGYTWEYLQFTVSENSEDYMVIVKNSRRVQKSF
                     DEQKKKTNEDNYLVNLADINTPVLKNISRNFVIQPEQIQLELNDPEEIKAVIEGTQLN
                     VSKKYSRFYIVTYEIHDETKFVESIKLTMPNRQTMTLELIEDLSYLIQGNEYEITDED
                     VEPIKNEKAPENTIFSGDTNSFGYSIPEEKEESGN"
     gene            871..>1120
                     /locus_tag="U0308_003047"
     CDS             871..>1120
                     /locus_tag="U0308_003047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2317990.1"
                     /translation="MFFGEKLRSVRELNGLSRKELADKLNLSEQAIWQYENQYTVPKF
                     EVVNELKGVFNVKAQFFYSEPFITNISKVESIAYRAEDR"
BASE COUNT          461 a          131 c          202 g          326 t
ORIGIN      
        1 aaaaaaaata aaaattaatg tttttacttt aaaaatgttg tatactagca tagatgaata
       61 gatgggagga atatagatgg atgaatttaa attagataaa acaattagta aagcaatagt
      121 tgatggaact ttaaaaggtt atttacagta tcttgaagag agaaaaagca aaaaagagac
      181 aatgaatgtt agtggcgctt atgcttggac aaaaggaaat catatcgatg accaagtttc
      241 taaaattgga caaatgaaaa atgtccagtt taaaatcgaa aaagctggct acacatggga
      301 atacttgcag tttacagtta gcgagaattc agaagattat atggttatcg taaaaaattc
      361 tagaagagta caaaaatctt ttgatgagca aaaaaagaaa acaaatgagg ataattattt
      421 agtgaattta gcagatataa acacacctgt attaaagaat atctcccgaa actttgttat
      481 ccaaccagag cagattcaac tcgaattaaa tgatcctgaa gaaataaagg cagtaattga
      541 aggaactcag ctgaatgtaa gtaaaaaata ttctcgattt tatatagtaa cttatgaaat
      601 tcatgatgag actaaatttg ttgaatctat taaattaact atgccaaacc gtcaaacgat
      661 gactttagaa cttattgaag atttaagtta tcttatccaa ggtaatgagt acgaaattac
      721 cgatgaagat gtagaaccaa ttaaaaatga aaaagctcca gaaaatacaa tcttttcagg
      781 cgatacaaat tcgtttggtt attcaattcc tgaagaaaaa gaagaatctg gaaactaact
      841 ttttaacaaa taagcaagga tgtgattata atgtttttcg gagagaaatt aagaagtgtc
      901 agggaattaa atggtctctc cagaaaggaa cttgctgaca aattaaattt aagtgaacaa
      961 gcaatttggc aatatgaaaa tcaatatact gttccaaaat ttgaagtggt taatgagttg
     1021 aaaggagtct ttaatgtaaa agctcaattt ttttactcgg aaccatttat aactaatatt
     1081 tctaaggtgg aaagtattgc ttatcgagct gaagatcgag
//
LOCUS       DASDYK010000258         1114 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.264, whole genome shotgun sequence.
ACCESSION   DASDYK010000258 DASDYK010000000
VERSION     DASDYK010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.264"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>1114
                     /locus_tag="U0308_003048"
     rRNA            <1..>1114
                     /locus_tag="U0308_003048"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          318 a          224 c          343 g          229 t
ORIGIN      
        1 cggcggaaca cgtgaaattc cgtcggaatc cgggaggacc atctcccaag gctaaatact
       61 ccctagtgac cgatagtgaa ccagtaccgt gagggaaagg tgaaaagcac cccggaaggg
      121 gagtgaaaca gttcctgaaa ccgtgtgcct acaagtagtt agagcccgtt aatgggtgat
      181 agcgtgcctt ttgtagaatg aaccggcgag ttacgatttg ttgcaaggtt aagcggaaaa
      241 agcggagccg tagcgaaagc gagtctgaat agggcgcata agtaacaggt cgtagacccg
      301 aaaccaggtg atctacccat gtccaggatg aaggtaaggt aatacttact ggaggtccga
      361 acccacgcac gttgaaaagt gcggggatga ggtgtgggta gcggagaaat tccaatcgaa
      421 cttggagata gctggttctc tccgaaatag ctttagggct agcctcgagg taaagagtca
      481 tggaggtaga gcactgtttg gactaggggc ccttctcggg ttaccgaatt cagataaact
      541 ccgaatgcca tgtacttata ctcgggagtc agactgcgag tgataagatc cgtagtcgaa
      601 agggaaacag cccagaccac cagttaaggt ccccaaatat atgttaagtg gaaaaggatg
      661 tggggttgct tagacaacca ggatgttggc ttagaagcag ccaccattga aagagtgcgt
      721 aatagctcac tggtcgagtg accccgcgcc gaaaatgtac cggggctaaa catattaccg
      781 aaactgtgga tgaacctctt tagaggttcg tggtaggaga gcgttctaag ggcggtgaag
      841 tcagaccgga aggactggtg gagcgcttag aagtgagaat gccggtatga gtagcgaaag
      901 aagggtgaga atcccttcca ccgaatatct aaggtttcct gaggaaggct cgtccgctca
      961 gggttagtcg ggacctaagc cgaggccgat aggcgtaggc gatggacaac aggtagagat
     1021 tcctgtacca gtgctaattg tttaaccgat ggggtgacac agaaggatag ggaatcgcac
     1081 gaatggaaat gtgcgtccaa gcagtgagtg tgag
//
LOCUS       DASDYK010000259         1113 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.265, whole genome shotgun sequence.
ACCESSION   DASDYK010000259 DASDYK010000000
VERSION     DASDYK010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.265"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            160..693
                     /locus_tag="U0308_003049"
     CDS             160..693
                     /locus_tag="U0308_003049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HEM2317991.1"
                     /translation="MRKKTLAVFLVFTVLVALLAPTNASAYTKLGYVMTKASAKNFKI
                     YINGSAKGFKNIIISGAKAWNPSPYLNTVSIGNDVKPNFTVSSSGTNKGSVLAVCNTT
                     YYKSNKLISKNEITLYKGFRSLSTNHKIETIVHEFGHGFGLGHVKTKNAIMLDKGFIN
                     KTKPQTDDFNGIKALYK"
     gene            709..>1113
                     /locus_tag="U0308_003050"
     CDS             709..>1113
                     /locus_tag="U0308_003050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317992.1"
                     /translation="MKKRITMILGLVCLSTLTACSNSENVKEKTSEEPATAQNGAETI
                     KAHNGVVSYHGKYLKLAENMDTLEKDAPIIIKATKKSEKTTVTKETKENVFPTDFYTM
                     SDVQINSIEKDTTGKLSESMTIKVLEYSVENVL"
BASE COUNT          436 a          155 c          217 g          305 t
ORIGIN      
        1 attttaatgt gcgatttgaa attcttttat gaataactag actagacacg ggggaaagat
       61 gtaagatgaa aagaatatct ttttaacaaa ttatgtatgg atttaattta aaataaacgc
      121 acacaaaatg tgtggaattt gagcgaagga gtaaacatca tgaggaaaaa aacgttagca
      181 gtgtttcttg tttttacggt gttagttgcg ttattagcgc caactaatgc aagcgcatat
      241 acaaaacttg gatatgtgat gacaaaggct agtgcaaaaa attttaaaat ttatattaac
      301 ggttcggcga aagggtttaa aaatattatt ataagcggtg cgaaagcttg gaatccttct
      361 ccttacttaa atacggttag cataggaaat gatgtcaagc ctaactttac ggttagtagt
      421 tcgggtacaa ataaggggag tgttttggcg gtctgcaaca ccacttacta caaatcaaat
      481 aaattaatct ccaagaatga gatcactttg tataaaggct ttcgttcact ttcaacgaat
      541 cataaaatag aaactattgt gcatgagttt ggtcatggct ttggcttagg gcacgtgaaa
      601 actaaaaatg caattatgtt agacaaagga tttataaata aaacaaaacc tcaaacagac
      661 gattttaatg gcatcaaagc tttatataag taaaaaggag gaatgacaat gaagaaaaga
      721 ataacaatga ttctaggttt agtatgtctt agtacattaa ctgcttgttc taatagtgaa
      781 aatgtgaaag aaaaaacatc agaagaacca gcaacagctc aaaacggagc agaaacaata
      841 aaggcgcaca atggggtggt ctcttatcac ggaaaatacc tcaaacttgc tgaaaatatg
      901 gatacccttg aaaaagatgc cccaattatc attaaagcaa ccaaaaaatc tgaaaaaaca
      961 actgtaacaa aagaaacaaa agaaaatgta tttccaaccg atttttatac gatgagcgat
     1021 gtgcaaataa attctatcga gaaagataca acaggaaaat tgagcgagag tatgactatt
     1081 aaagtgttgg agtatagcgt agaaaatgtt ttg
//
LOCUS       DASDYK010000260         1113 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.266, whole genome shotgun sequence.
ACCESSION   DASDYK010000260 DASDYK010000000
VERSION     DASDYK010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1113
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.266"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..340)
                     /locus_tag="U0308_003051"
     CDS             complement(<1..340)
                     /locus_tag="U0308_003051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317993.1"
                     /translation="MSIVVEQLVMKDTGERWGSPYLLEQLKINLANTSADFVIVCSKS
                     DQNILSQIQDYLARFADNMVGADIHLFNQNPLFVQHLRKLPNEDSYEMTDTLQFLEET
                     IPNPTSTYLER"
     gene            complement(337..>1113)
                     /locus_tag="U0308_003052"
     CDS             complement(337..>1113)
                     /locus_tag="U0308_003052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HEM2317994.1"
                     /translation="LEGTDANTEEFETRAHSPYTDVLVSSEGIIPEYMEAFRKQANQI
                     KPIGVPRTDVFFDQEYVAYTKEKYMKMYPQLRDKKVLLYAPTFRGGPNERFNYSVVLD
                     IAALKKELGDTHILILKFHPVIKNVSFNVDENDPFILDLTLNNDINDLMLFSDALITD
                     YSSVIFEFSLMNKPIYFFAYDIDDYLDERGFYFDYKATIPGEVFKDTPSLIESIKTGK
                     YNYDELEVFKKKFVGSLDGNSTKRFVETYIVQANEEVKDL"
BASE COUNT          371 a          211 c          161 g          370 t
ORIGIN      
        1 cacgttccaa ataagtgcta gttggattcg gaatcgtttc ctctaaaaat tggagtgtat
       61 ccgtcatttc ataactatct tcatttggca attttcgtaa atgttgtaca aaaagagggt
      121 tttgattaaa taaatggata tcagcaccga ccatattatc agcgaaacga gcgagatagt
      181 cttgtatttg cgaaagaata ttttgatcgc ttttcgaaca aacaataaca aaatctgctg
      241 atgtattagc aagatttatc tttagttgct ctaacagata aggacttccc catctctcac
      301 cagtatcttt cataacgagt tgttccacta caatactcat aaatctttca cttcctcatt
      361 tgcttgaaca atataggtct ctacaaaacg cttcgttgaa ttaccatcta agcttccaac
      421 aaatttcttt ttaaagactt ccagttcgtc gtaattatat tttcccgttt taatcgactc
      481 aatgagcgac ggcgtatctt tgaaaacttc accaggaata gttgctttgt aatcgaaata
      541 aaatccgcgt tcatccaaat aatcatcaat atcatatgca aagaaataaa ttggcttatt
      601 cattaaacta aattcaaaaa taaccgaaga ataatctgta ataagcgcat cactaaataa
      661 cattaaatca ttaatatcgt tattcaacgt caagtctaaa ataaatggat cattttcatc
      721 cacattaaat gaaacgttct taataacagg atggaatttt aaaattaaaa tatgtgtatc
      781 accaagttct tttttcaaag cagcaatatc aagtacaacg ctataattaa agcgttcatt
      841 tggcccaccg cggaaagttg gcgcatatag caacactttt ttgtcgcgaa gttgcggata
      901 cattttcata tatttttctt ttgtatatgc cacatattct tgatcaaaaa acacatctgt
      961 tctaggcaca ccaataggtt taatttgatt agcttgtttt ctaaaagctt ccatatattc
     1021 aggaattatg ccttctgaac taacaagaac atctgtgtaa ggcgaatgag cacgtgtctc
     1081 aaattcttct gtattagcat ctgtaccttc aag
//
LOCUS       DASDYK010000261         1057 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.267, whole genome shotgun sequence.
ACCESSION   DASDYK010000261 DASDYK010000000
VERSION     DASDYK010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1057)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1057)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1057
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.267"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            36..668
                     /locus_tag="U0308_003053"
     CDS             36..668
                     /locus_tag="U0308_003053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1642 domain-containing protein"
                     /protein_id="HEM2317995.1"
                     /translation="MRFKEGDKVEFIWIGELKQGVVTEIEETKNAISYQIKYSGEMGM
                     TWLDERDLLSPAPVLKVPKLVGDFLENHSKEDGHTLHDLLCDLLTSRDSLDENVYDWI
                     MENNNENGELLARAWLDGYEVEKELLYYVKLPISKRNEATDELEVINMCLLLNIQSHE
                     TCISGNYRWVDKLKRTGWRTKLTEAQIKDMPEGDAYWQFAVPVRDLECEA"
     gene            665..>1057
                     /locus_tag="U0308_003054"
     CDS             665..>1057
                     /locus_tag="U0308_003054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003769972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317996.1"
                     /translation="MREIEFRGKRIDNGEWVYGNLMQFEDSATFIFADERKGASTLTY
                     AHFIINNMHAIDEKTLGSCIGREDEDEKTIFENDIVQVVLEHWPMGYYQEVEYIGVVK
                     YDTDICAYYLDLIKPPAVSGETIPDEIDG"
BASE COUNT          368 a          141 c          245 g          303 t
ORIGIN      
        1 cctatgcaat taaatctttt taaggaggaa caagcatgag atttaaagaa ggcgataaag
       61 tagagtttat ttggataggt gaattgaaac aaggtgttgt aactgaaata gaagaaacta
      121 aaaatgctat atcctatcaa attaaatata gtggagaaat gggcatgact tggcttgatg
      181 aaagggactt actttctccg gctccagttt taaaagttcc gaaattagta ggtgattttt
      241 tggaaaatca ttctaaagaa gatggtcata cacttcatga tttattgtgc gatttattaa
      301 cttctagaga ttcgttagat gaaaatgtct acgactggat catggaaaac aataatgaaa
      361 atggtgaatt gcttgcacgc gcttggcttg acggctacga agtcgagaaa gaactgcttt
      421 attatgtgaa gttaccgatt tcaaagcgga atgaagctac agacgaatta gaagtaatta
      481 acatgtgtct tttgttaaat atacaatcac acgaaacatg tatttctgga aattacagat
      541 gggttgataa gctaaaaaga acgggttgga gaaccaaatt gacagaagct caaataaaag
      601 atatgcccga aggtgacgct tattggcagt ttgctgttcc tgttagggat ttggagtgtg
      661 aagcatgaga gagattgagt ttagaggtaa acgaatagat aacggagaat gggtttacgg
      721 taatttaatg cagtttgagg atagcgctac tttcattttt gcagatgaac gaaaaggcgc
      781 tagcacatta acttatgcac attttattat taataacatg cacgcgatag acgaaaaaac
      841 acttggaagc tgtataggtc gcgaagatga agacgaaaaa actatttttg aaaatgacat
      901 tgtgcaagta gttttagaac actggccaat gggatactac caagaagtag aatacattgg
      961 agtggttaaa tatgacacgg atatatgtgc gtattatctt gatttgatta agcctcctgc
     1021 tgttagtggc gaaacgatac cggatgaaat cgacgga
//
LOCUS       DASDYK010000262         1043 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.268, whole genome shotgun sequence.
ACCESSION   DASDYK010000262 DASDYK010000000
VERSION     DASDYK010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1043)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1043)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1043
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.268"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            26..>1043
                     /locus_tag="U0308_003055"
     CDS             26..>1043
                     /locus_tag="U0308_003055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2317997.1"
                     /translation="MINKKWMKIVMIPMLVVPMYGLTTVGGQLQDSLTGENSFVKEVE
                     AATTASQQAFIDKIAPAAQASQEKYHLLSSITLAQAILESGWGKSGLATQGYNLFGIK
                     GKYNGQSVIMTTSEYVNGEWIKIDAEFRKYPSWNESVTDHTLLLVNGTSWNKDLYKKV
                     VDATDYKVAAMELQKAGYATSPTYGASLIQVIENYDLAKYDVLYDKILTQKSTSGKAT
                     VTSPTGNGVWTLPYKVKGVQSVSPASTYANKDIDLVSVATTKRGTYYQFKYNGKVVGW
                     VDGKALTIYDSVNYDKVNVGRAKITSPVSNGIWSKPYNVYGREFVTNATTYAQQEIKL
                     LREAQ"
BASE COUNT          375 a          164 c          209 g          295 t
ORIGIN      
        1 caaattaagg agtggttgga gaataatgat aaataaaaag tggatgaaaa ttgtaatgat
       61 tccgatgcta gttgttccaa tgtacggttt gacaactgtt ggcggacaat tacaagattc
      121 attaactgga gaaaattcct ttgttaaaga ggttgaagct gcaacgacag catcgcaaca
      181 agcatttatc gacaaaatag cacctgctgc ccaggcatct caagaaaaat atcatctgtt
      241 atctagtata actttagctc aagcaattct agaatctggt tggggaaaaa gtggacttgc
      301 tacacaagga tataatttat ttggtataaa agggaaatat aatggacaat cagttatcat
      361 gacaacttct gaatatgtga acggtgagtg gattaaaatt gatgctgaat tccgcaaata
      421 ccctagctgg aatgaatctg tcactgacca tactctttta ttagtgaacg gaacttcttg
      481 gaataaagac ttatataaga aagttgtcga cgcaacggat tataaagtag ctgcaatgga
      541 gcttcaaaaa gctggatatg caacctctcc tacatatggt gctagcttaa ttcaagtaat
      601 tgagaattat gatttagcca aatatgatgt tttatacgac aaaattctta ctcaaaaatc
      661 cacttccgga aaagcaactg ttacaagtcc gactggaaat ggtgtatgga ctttaccgta
      721 taaagtaaaa ggagtgcaat ctgttagtcc agctagcaca tacgctaaca aggatatcga
      781 tttagtatct gttgctacaa caaagagagg tacgtactat caatttaaat ataatggtaa
      841 agtagttggt tgggtagatg gcaaagcatt aactatttat gatagtgtca attatgataa
      901 agtaaatgtc ggacgtgcta aaattactag cccagtaagt aacggtatct ggtctaaacc
      961 atacaatgtt tatggaagag aatttgttac gaatgcaaca acttacgcac aacaagaaat
     1021 taaactttta cgcgaagcac aaa
//
LOCUS       DASDYK010000263         1025 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.269, whole genome shotgun sequence.
ACCESSION   DASDYK010000263 DASDYK010000000
VERSION     DASDYK010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1025)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1025)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1025
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.269"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            136..420
                     /locus_tag="U0308_003056"
     CDS             136..420
                     /locus_tag="U0308_003056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3130 family protein"
                     /protein_id="HEM2317998.1"
                     /translation="MTKIRINKEKMINHATTLGDSAGKLDYYPLKNENMSYTQTNSIH
                     LLRESLLELLEGIENLGTVAQDDATRIKQMGEAFAKQDKSISQKMNLEVR"
     gene            462..773
                     /locus_tag="U0308_003057"
     CDS             462..773
                     /locus_tag="U0308_003057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2317999.1"
                     /translation="MEREDDALYAIKNKIRHLEDMEEDIHQARREIDDILYHMKEVWR
                     GEHAEHTFWQIEDEVNHYNRRTACMTNDIHTELNNEQKKHRQNLHALETKQQDIKKEM
                     T"
     gene            776..916
                     /locus_tag="U0308_003058"
     CDS             776..916
                     /locus_tag="U0308_003058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318000.1"
                     /translation="MATKPTVENLYIAGTKQLTGFGREYEYLLQHGYTYDVKTSTMKL
                     KK"
BASE COUNT          422 a          164 c          186 g          253 t
ORIGIN      
        1 ttcagatcat aaagaatatt ctttgacatc aattatttac aatgccattt tcaatgctac
       61 taaatgacaa tccaagaaaa tgtcattata atagaaccat gatacaacct tcacatacag
      121 aaagggaaaa caaccatgac aaaaattcgt attaataaag aaaaaatgat taatcatgcc
      181 acaaccctag gtgatagtgc ggggaaatta gattactatc ctttgaaaaa tgaaaacatg
      241 agttatacgc aaactaattc tatccacctt cttcgagaat cattacttga actacttgaa
      301 ggcatcgaaa atttagggac tgttgcacaa gatgatgcta ctcgaatcaa gcaaatgggg
      361 gaagcttttg caaaacaaga taaatccatc agccagaaga tgaatttgga ggtgcgttaa
      421 gtggataaac gtacccaaga attaggtgaa ataaaaaaaa aatggagcga gaagatgacg
      481 ctctatacgc gattaaaaat aaaattagac atttagagga tatggaagaa gatattcatc
      541 aagctagacg cgaaatcgat gacatccttt accatatgaa agaagtttgg cgaggagaac
      601 atgcagagca tactttttgg caaatagaag acgaggtaaa tcattacaac cggagaactg
      661 cttgcatgac taacgatatt cataccgaac taaataatga gcaaaaaaag catcgacaaa
      721 atctccacgc gctcgaaact aaacaacagg atattaaaaa ggagatgacg tagctatggc
      781 tacaaagccg actgtagaaa acttatacat cgctgggact aaacaactta cgggttttgg
      841 gcgtgaatat gaatacttac tacaacatgg ttatacttat gatgtaaaaa caagtacaat
      901 gaagttgaag aaatgaggaa ttcaagcatg aaattagacg ataatgtaaa agaaataatc
      961 cttaaaaaaa gtgaatttct actccataat aattttaaat taatagaaat aacggatgct
     1021 actat
//
LOCUS       DASDYK010000264         1024 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.270, whole genome shotgun sequence.
ACCESSION   DASDYK010000264 DASDYK010000000
VERSION     DASDYK010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1024)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1024)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1024
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.270"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
BASE COUNT          361 a          138 c          185 g          340 t
ORIGIN      
        1 ggttgtatat tttttactag agatcacaaa gaatttgttc acctctacaa tgacttatta
       61 ataaacccaa aaactatgga agtgaaaacg tttcgtgaag tgttagcttc tacgatacat
      121 atacggaata gtgatggaga tattattttt aaatacgcga aaaatgcttt tcgaccagta
      181 ataagaatga aagtaaagta ataaaataaa cgtcctatat tgtgcaaact ataaaattat
      241 tgtaaaaaaa caaaaacgaa tgcacagcaa cagtatattt ttatttttgt tttacgataa
      301 ctaacagatg acaagtgtgt aaaacgccag aatagatttt tttaaggctt tacttaaata
      361 atctatgaga aaaagaagca aagataaaaa tacgctcatt gaaaaataag tgatttaaat
      421 tcttttttgt ctgaaagaag taagatcact ttatactgta tcgtgcggtg agggtgtggt
      481 tatacgcact cactacttcc tatattggaa gcgcataaga cgcattgacg ttgtgatata
      541 acaggtcttt caaaataaaa aagacgtgtc catgtctcgt ttttttcttt ttgttgaagt
      601 ggaaataagg gtttgtccat ggaaggttct cctaattcac ttgatgaaaa gttttcaggt
      661 tatccgaaaa acatgtaaaa caagccagaa acggaagcgt tgaaaggcat gtgttttaac
      721 acatgcaatc tttcataggg tggcaactcc ggccttaaag ttgctgatat aagaccaaaa
      781 attaatatta actttccaaa atagtttgta gaatataggg cgtttaataa gttagtagtc
      841 tggagggtta tttgcgagtg aataaattat tattaacgtt aggttttgtc ttaattccgt
      901 tacttgttat atttgcacta tttatgacga attcagttga aactcaaatt actttgatgt
      961 gtgtagccct agttaccgca attattatag gttttaaagc tgaagcattt aaatatgatt
     1021 atac
//
LOCUS       DASDYK010000265         1020 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.271, whole genome shotgun sequence.
ACCESSION   DASDYK010000265 DASDYK010000000
VERSION     DASDYK010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.271"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..103)
                     /locus_tag="U0308_003059"
     CDS             complement(<1..103)
                     /locus_tag="U0308_003059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5105 domain-containing protein"
                     /protein_id="HEM2318001.1"
                     /translation="MKKGLFSMVLVLAMVLVLSACGASRVEPKKAGEI"
     gene            227..703
                     /gene="ybaK"
                     /locus_tag="U0308_003060"
     CDS             227..703
                     /gene="ybaK"
                     /locus_tag="U0308_003060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HEM2318002.1"
                     /translation="MNKKTNACRILDKQKVNYELREYAWSEDSLDALHVAAETGNNPA
                     QIFKTLVLTGDKTGNIVACIPADKTLHLKHLAKISGNKKCELIAVDTLEKLTGYIRGG
                     CSPIGMKKLFPTFIDNSAESLDTILISAGKRGLQIELAPTDLKKVVRAEFAMIKEE"
     gene            730..>1020
                     /locus_tag="U0308_003061"
     CDS             730..>1020
                     /locus_tag="U0308_003061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HEM2318003.1"
                     /translation="MNLSVYVASAFSKNNKGGNKAGVVLNEPTLATAQKMAIAKQLGY
                     AETAFLTESNCADYKLEYFTPKEEVDLCGHATIGTFAILMHLNKIHKSQYTIE"
BASE COUNT          341 a          166 c          205 g          308 t
ORIGIN      
        1 tgatttctcc tgcttttttt ggttctaccc ttgatgcgcc acatgcactt aatacaagta
       61 ccattgctag cacaagaacc atactaaata accctttttt cattagtaaa tctccctttc
      121 ttatttgaat tccacttcat tgtacagaat gaaaagggaa aagccaacta tttcacaaaa
      181 agtgtcataa attatacata tttctgaatt aattgaggtg aaagacttga ataaaaagac
      241 aaatgcgtgt cggattttag ataaacagaa ggtaaactat gaattacgtg agtatgcctg
      301 gagcgaggat tcccttgatg cgcttcatgt tgcggcagaa acagggaata atcccgcaca
      361 gatttttaaa acattagtcc tgactggtga caaaacagga aatattgtag cgtgcattcc
      421 tgccgataag actttgcatt taaaacattt ggcaaagatt agcggtaata aaaaatgtga
      481 attgattgcg gtagatacgt tagagaagct gactggctat attcgcggtg gatgttcgcc
      541 gattggaatg aagaaattat ttccaacgtt tattgataac agcgctgaat cgcttgatac
      601 tatactgatt tcggctggaa aaagaggatt acaaatcgaa ctagccccta ctgatttgaa
      661 aaaagtagta cgtgcggagt ttgcgatgat taaggaagaa taaagttttt acaagggagt
      721 tttattttta tgaatttatc tgtttatgtt gcaagtgcat ttagtaagaa taataaaggt
      781 ggaaataagg cgggtgtcgt attgaacgaa ccaacactcg ccactgctca aaaaatggcc
      841 attgcaaaac aattaggcta tgcggaaact gctttcctaa ctgaatctaa ctgtgctgat
      901 tataaattag aatattttac tccgaaagaa gaagtcgatt tatgtggtca tgcgacaatc
      961 ggcacttttg cgattttgat gcatttaaat aaaattcata agagccagta tacaattgaa
//
LOCUS       DASDYK010000266         1004 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.272, whole genome shotgun sequence.
ACCESSION   DASDYK010000266 DASDYK010000000
VERSION     DASDYK010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1004)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1004)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.272"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(138..581)
                     /locus_tag="U0308_003062"
     CDS             complement(138..581)
                     /locus_tag="U0308_003062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEM2318004.1"
                     /translation="METILEVVRIEQIIREAEEGVDYIIRSPEDGAKIASRFIGRDDR
                     EVFFVMCLNTKNNVVAVHRCHVGSLNSSIVHPREVFKSAILNNVASVILAHQHPSGDI
                     KPSMEDINVTKRLVEAGKLLGIEVLDHLIVNSDNSFTSLKERGYI"
BASE COUNT          297 a          201 c          157 g          349 t
ORIGIN      
        1 atttttcact gttaatgaaa aatttaaggt tcgatttgca aattaaattc ctttaggtga
       61 tgtttgaggt ctatcattta taagatgtag ttcttacatc tctcatatct tgaagaaaag
      121 ggagttgttt ctccctttta aatatagcct ctttctttca ggctagtaaa actgttatca
      181 ctatttacta ttaggtggtc aagcacttca atgcctagta gctttccagc ttcgactaat
      241 ctcttagtta cgttaatatc ttccatcgat ggttttatgt caccacttgg atgctgatgt
      301 gcaagaatga cacttgctac attattaagt attgctgatt taaatacctc ccgtggatga
      361 acaatcgagg aatttaacga accaacatga caacgatgaa ctgcaacaac attatttttc
      421 gtatttaaac acataacaaa aaacacttca cgatcatcac gaccaataaa gcgagacgct
      481 atctttgctc cgtcttctgg gctacgaatg atataatcaa caccttcctc tgcttctcta
      541 ataatttgtt cgatgcgaac tacttctaaa atggtttcca tctagatcaa cctctctatt
      601 tttttgacct ttttggtcac cacagagaga atcttcgcat cgattaatgt caagtggctt
      661 aagtagcaaa gctatcgagt gattcgtata tgttttgatg aagcccaatg aattagggtg
      721 cgttaaaagc gttaattgct ttcttacgca cccttatcct acttggctga ctcataacat
      781 ccgaagaacg aagacccttt acttaatcga taattcgtct atgctttaca gacgaattag
      841 aagattataa ttggtagagc tgaaaaggaa aaaaacaaaa tgtagcctat ttacttgttt
      901 tttatttgat tgattacact ttcttttaaa taatttgtcc aatccatttt aaagcctact
      961 ggaccaaatt ctccctctat catttccctt ggctctgctt gacc
//
LOCUS       DASDYK010000267          985 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.273, whole genome shotgun sequence.
ACCESSION   DASDYK010000267 DASDYK010000000
VERSION     DASDYK010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.273"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            94..957
                     /locus_tag="U0308_003063"
     CDS             94..957
                     /locus_tag="U0308_003063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliC/FljB family flagellin"
                     /protein_id="HEM2318005.1"
                     /translation="MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAA
                     GLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSF
                     SDEDRKQYTAEFGSLIKELDHVADTTNYNNIKLLDQTATGAATQVSIQASDKANDLIN
                     IDLFNAKGLSAGTITLGSGSTVAGYSALSVADADSSQEATEAIDELINNISNGRALLG
                     AGMSRLSYNVSNVNNQSIATKASASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQ
                     TPQMLTQLINS"
BASE COUNT          342 a          194 c          171 g          278 t
ORIGIN      
        1 aaaaaacatt tgatttttta aaaaaatgaa gatataataa agcatataga gaagagaagt
       61 cttttctaaa ccgaatgtag gagggaaaca caaatgaaag taaatactaa tatcattagc
      121 ttgaaaacac aagaatatct tcgtaaaaat aacgaaggca tgactcaagc gcaagaacgt
      181 ttggcatctg gtaaacgtat taacagttct cttgatgacg ctgctggtct tgcagttgtt
      241 actcgtatga acgttaaatc tacaggctta gatgcagcaa gcaaaaactc atccatgggt
      301 attgacttgt tacaaacagc ggattcagct cttagctcca tgagttcaat cttgcaacgt
      361 atgcgtcaat tagcagtaca atcttctaac ggttcattca gtgacgaaga tcgtaaacaa
      421 tacactgctg aattcggtag cttgatcaaa gaacttgatc acgttgctga cactactaac
      481 tacaacaaca tcaaattact agatcaaact gctacaggtg ctgctactca agtaagcatc
      541 caagcgtctg ataaagctaa tgacttaatc aatatcgatc ttttcaatgc gaaaggtctt
      601 tctgctggaa caatcacttt aggtagtggt tctacagttg ctggttatag tgcattatct
      661 gttgctgatg ctgattcttc tcaagaagca acggaagcta ttgatgaatt aatcaataac
      721 atctctaacg gtcgtgcact tctaggtgct ggtatgagtc gccttagcta caatgtatct
      781 aacgtgaaca accaatccat cgcaactaaa gcatctgctt cctctattga agatgcagat
      841 atggctgctg aaatgtccga aatgactaaa tacaaaattc ttacacaaac atctatcagc
      901 atgctttctc aagcaaacca aacaccgcaa atgttaactc aattaattaa cagctaataa
      961 catatcaaat tcatttatcg aacat
//
LOCUS       DASDYK010000268          957 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.274, whole genome shotgun sequence.
ACCESSION   DASDYK010000268 DASDYK010000000
VERSION     DASDYK010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..957
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.274"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..547)
                     /locus_tag="U0308_003064"
     CDS             complement(<1..547)
                     /locus_tag="U0308_003064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318006.1"
                     /translation="MSEIQHFSEFIDGATNYWYENKFDRCNACDMVNVMLTVFDGDIS
                     TPGNQSNKIPRRISVSAKVYDVDRWNQSREELIELLNWVSGDLFEMSFEKNEELFDAF
                     PLELPSPRKECITLFSGGLDSFAGSYYNFLNNISSDYVGYVNKAEERTYQKRLQSFYR
                     KIFSAGGSEVDIRNKYQKPKIF"
     gene            complement(547..>957)
                     /locus_tag="U0308_003065"
     CDS             complement(547..>957)
                     /locus_tag="U0308_003065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318007.1"
                     /translation="CKEITSDFIKREQWINEIMELVEQDNVTGISDVLLKALKIALGE
                     TVKAEQNETYFVEKLLYEIIFLSLENTMQGALETLEEGITIPQIRKEFIKPLADKLFE
                     EDIKTEIPALVLGKTTLAVINNKIADKLKNFGGF"
BASE COUNT          303 a          191 c          116 g          347 t
ORIGIN      
        1 agaaaatttt aggcttttga tatttattcc tgatatcaac ctcactacca cctgcagaaa
       61 aaatctttct ataaaaagac tgtaagcgct tttggtatgt tctttcctcg gctttattaa
      121 catatcctac ataatcactt gaaatattat ttaagaagtt gtaataggag cctgcaaaag
      181 aatctaatcc acctgaaaat agtgtgatac actcttttcg aggacttggg agttctaatg
      241 gaaaggcgtc aaatagttct tcatttttct caaaagacat ctcaaatagg tctcctgata
      301 cccaattaag taattctatt aattcctctc tagattgatt ccaacgatcc acatcatata
      361 cttttgcaga tacagatatc ctccgaggaa ttttattact ttggttacct ggtgtagaaa
      421 tatctccatc gaacactgtt aacataacgt taaccatatc acatgcatta cagcgatcaa
      481 atttattctc ataccaataa tttgtagccc catctataaa ctctgaaaaa tgttggattt
      541 cactcattaa aagccaccaa aattttttaa cttatcagcg attttattat ttattacagc
      601 taaagttgtt ttacctaata ctaaagctgg aatttctgtc tttatatctt cctcaaatag
      661 cttatcagca agaggtttta taaactcttt tcgaatttgt ggaatagtta tcccttcctc
      721 caaagtttcc aaagctcctt gcatagtgtt ttctaaagat aaaaaaatga tttcatacaa
      781 tagtttctct acaaagtaag tttcattttg ttcagcttta acagtttctc ctagcgctat
      841 ttttaaggcc ttcaacaaaa catctgatat tccagttaca ttatcctgtt caaccaactc
      901 cattatctca tttatccatt gttctctttt aataaaatca cttgtaatct ctttaca
//
LOCUS       DASDYK010000269          956 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.275, whole genome shotgun sequence.
ACCESSION   DASDYK010000269 DASDYK010000000
VERSION     DASDYK010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.275"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            94..330
                     /locus_tag="U0308_003066"
     CDS             94..330
                     /locus_tag="U0308_003066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015084540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318008.1"
                     /translation="MPDWDFNNPESMKAWDLASGSYAEQVSGEVRAVVGSDLRKGNIW
                     ENVELPRLKNNPNVTKITTIDPKTGLEKIIFERK"
     gene            336..569
                     /locus_tag="U0308_003067"
     CDS             336..569
                     /locus_tag="U0308_003067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003732237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318009.1"
                     /translation="MKITGNSSQVKFDLENGYVVKADGEMLVGGEFVVFKDSMKNWEP
                     PYENKKLSESEVQEIIQQVKQSTNENTVQISFE"
     gene            657..>956
                     /locus_tag="U0308_003068"
     CDS             657..>956
                     /locus_tag="U0308_003068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase (quinone)"
                     /protein_id="HEM2318010.1"
                     /translation="MDNFYKGFEGYPEIDFYTYINGEKTGIEMWEGYFDSIMNELSPV
                     DGRWVSLAYYYHLYEGWYDESPWVIPDNKKALEQFETIDVKILDNVTQEVMMKLIK"
BASE COUNT          371 a          100 c          211 g          274 t
ORIGIN      
        1 actttccctc ccaagaaagc cagtggggct gatatagcta aaagtaaagg tggcgttact
       61 ttagaatcaa caataggaaa taaaaatatt gaaatgccag actgggattt taataatcct
      121 gagtcaatga aagcatggga tttggcttct ggttcttatg cagaacaagt ttctggtgaa
      181 gttcgtgcag tagttggttc ggatttgaga aaaggaaata tttgggaaaa tgttgagtta
      241 cctagattaa aaaataatcc taacgtaacg aaaataacaa cgattgatcc taaaacagga
      301 cttgaaaaaa taatttttga aaggaagtaa gtgaaatgaa aattacaggt aatagttcac
      361 aggtgaaatt tgatttagag aatggatatg tagtgaaagc agatggagaa atgttagttg
      421 gaggtgaatt tgttgtattt aaagattcta tgaagaattg ggaacctcca tatgaaaata
      481 aaaagctttc tgaatctgaa gtgcaagaaa ttattcaaca ggtaaaacag agcacaaatg
      541 aaaatacagt acaaatttca tttgaataaa agaaatccga gaagtagagt agttgtttaa
      601 tcctaaatgt taacaggtgg acattgggaa taataaggaa tggcggaaga taaaatatgg
      661 ataattttta taaaggtttc gaaggatatc cagaaattga cttttatact tatataaatg
      721 gtgaaaaaac aggtatagaa atgtgggaag gctactttga cagtattatg aatgaactta
      781 gtccagttga tggtagatgg gtttctttag catattatta tcatttatat gaagggtggt
      841 atgatgaaag cccatgggtg attccagata ataaaaaagc cttggaacaa tttgaaacaa
      901 tcgatgtaaa aatattggac aatgtgacac aagaggttat gatgaaacta attaag
//
LOCUS       DASDYK010000270          925 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.276, whole genome shotgun sequence.
ACCESSION   DASDYK010000270 DASDYK010000000
VERSION     DASDYK010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 925)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 925)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..925
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.276"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..224
                     /locus_tag="U0308_003069"
     CDS             <1..224
                     /locus_tag="U0308_003069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318011.1"
                     /translation="EIELQRVGATSDVITSSFKSNNSVVPMANPVIGSFSGYAIEETE
                     VSKIQIGNPQGDKKAGAYQTTLTFTAAFK"
     gene            252..557
                     /locus_tag="U0308_003070"
     CDS             252..557
                     /locus_tag="U0308_003070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2318012.1"
                     /translation="MKRKLVLAMVLISFCGMFLLSPERVQASQTVVEVFISEDDLDVS
                     EENIQEIPKKELAASSDKDNKQPILPKAGDTVTNYTLLGLVLVLIWLIMQRKRKKKE"
     gene            633..899
                     /locus_tag="U0308_003071"
     CDS             633..899
                     /locus_tag="U0308_003071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2318013.1"
                     /translation="MARIEYGEEIQKSLLVLYSRGSTIDSICKEYGIPRYEFHKWMKL
                     HDADKLETKEVKTFLQIRELKQQKNKLEEEILFLNEAINLLESP"
BASE COUNT          337 a          136 c          201 g          251 t
ORIGIN      
        1 gagagattga attacaacgg gttggcgcta cttcggacgt aataactagt agttttaaaa
       61 gtaataatag tgtagtaccc atggctaatc ctgttatcgg aagcttttca ggttatgcga
      121 tagaggaaac agaagtaagt aaaattcaaa ttggaaaccc tcaaggagac aaaaaagctg
      181 gagcatatca aacaacgtta acttttacag ctgcttttaa ataagaaatt acgaaaggag
      241 ttgtgcattt cttgaaaagg aaattagttc tggcaatggt actaatcagc ttttgtggga
      301 tgttcctctt atcgcctgaa cgagttcaag ctagtcaaac agtggttgag gtgttcattt
      361 cagaggatga tttggatgtc agtgaagaaa acatacagga gatccctaaa aaagaactgg
      421 cagcctcttc agataaggat aacaaacaac ccatattacc taaagcaggt gatacagtaa
      481 ctaactatac cttattgggt ttagtgctcg tccttatttg gttgataatg caaagaaaaa
      541 ggaagaagaa ggaataaccc cctgtgacat catcataatg tagtaagtaa aaaggatata
      601 aaaatttctg tgttagatag gaagtgacag gtatggctcg aatcgaatat ggagaagaaa
      661 ttcaaaaaag cctactggtt ttatactcta gggggtctac catagactct atctgcaagg
      721 agtatggtat ccctcgttac gaatttcaca aatggatgaa gttacatgat gccgataaac
      781 tggaaaccaa agaggtgaag actttcctac agataagaga attaaaacag caaaaaaaca
      841 aattagaaga agaaattttg tttttaaatg aagcaatcaa tctgttggaa agtccttgag
      901 agggatgatt ttaagtattg attga
//
LOCUS       DASDYK010000271          907 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.279, whole genome shotgun sequence.
ACCESSION   DASDYK010000271 DASDYK010000000
VERSION     DASDYK010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 907)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 907)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..907
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.279"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..>907)
                     /gene="gtfA"
                     /locus_tag="U0308_003072"
     CDS             complement(<1..>907)
                     /gene="gtfA"
                     /locus_tag="U0308_003072"
                     /EC_number="2.4.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sucrose phosphorylase"
                     /protein_id="HEM2318014.1"
                     /translation="LIYKRKDKAPFQEVEFADGGTELVWNTFGEEQIDLDVTAEVTKE
                     FIRQTIKNMAAHGCSILRLDAFAYAIKKLDTNDFFVEPEIWGLLDEVKAEAAKYDMEL
                     LPEIHEHYSIQMKIANHDYYIYDFALPMVMLYSLYSGRVERLAKWLEMSPMKQFTTLD
                     THDGIGVVDARDLLTDEELDYTSAELYKIGANVKKIYSSEKYNNLDIYQINSTYYSAL
                     GDDDKSYLLARVIQCFAPGIPQIYYVGLLAGKNDIDLLEETKEGRNINRHYYTIDEIK
                     NEVKRPVVKALCNLLRFRNTSEAFD"
BASE COUNT          289 a          188 c          117 g          313 t
ORIGIN      
        1 aaatcaaatg cttcagaagt atttctaaat ctcagtaaat tgcacaacgc tttaacaact
       61 ggtcttttta cttcattttt aatttcatct attgtgtagt aatgacgatt aatattacga
      121 ccttctttcg tttcttctaa aaggtcaata tcatttttgc cagcaagtaa accaacataa
      181 taaatttgcg gaatccccgg cgcaaaacat tgaattactc ttgccaacaa gtaacttttg
      241 tcatcgtcac ccaaagcact ataataggta ctattaattt gataaatatc cagattatta
      301 tatttttcag aggaatatat ctttttaaca ttagctccta ttttgtataa ttctgctgaa
      361 gtataatcga gttcctcatc tgttaataaa tcgcgtgcat ccacaacgcc aatgccatca
      421 tgcgtatcta aagtagtaaa ttgcttcatc ggactcattt ctaaccattt agctaaacgt
      481 tccactcggc cactatataa cgagtacagc atcaccatgg gtaacgcaaa atcatagata
      541 taataatcat ggttcgcgat tttcatttgg atggaataat gttcatgaat ttctggtaat
      601 aattccatat catatttggc cgcttctgct ttcacttcat ccagtaaacc ccaaatttcc
      661 ggttctacaa aaaaatcatt tgtatctaat tttttaattg cataagcaaa ggcgtcaaga
      721 cgcaaaatag aacaaccatg tgcagccata ttttttatcg tttgacgaat aaattctttt
      781 gtaacttcgg ctgtcacatc taaatcaatt tgttcttccc caaaagtatt ccaaactaat
      841 tccgttcccc catcagcaaa ttcaacttct tgaaaaggcg ccttatcttt tctcttataa
      901 attaaat
//
LOCUS       DASDYK010000272          899 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.280, whole genome shotgun sequence.
ACCESSION   DASDYK010000272 DASDYK010000000
VERSION     DASDYK010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..899
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.280"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(94..723)
                     /locus_tag="U0308_003073"
     CDS             complement(94..723)
                     /locus_tag="U0308_003073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318015.1"
                     /translation="MKNKTTKKIICGGLATVLLSSSLALPTTALASTSEQMVQDYQQE
                     ETFSESALTELDNLTAGKYITFDSSLKQYKVNSTIGSEMTPEKIEAVNKQVAETNNLL
                     ALAKKDSSTNIIAVTPKGEETVVKRGLLKGAGVNRVTYHWNYARIRLSKNTVRTMGAG
                     LSIAGIWLPLKVVSKVCASLGVGTGFVKHGIWFDYNYFSNLLLTGYGWQ"
BASE COUNT          281 a          182 c          121 g          315 t
ORIGIN      
        1 ataaaaaaac tgggtatcgc tataattgtt acaataagcg ctctgatata aaaccaacgt
       61 gttcctcgca tttagaattc ctccaagtta aagttactgc cacccatagc cagtaagaag
      121 taggttagaa aaataattat aatcaaacca aattccgtgt ttaacaaaac ctgtacctac
      181 acccaaagaa gcacaaactt ttgatactac tttcagcggc aaccagatcc cagctatact
      241 taaacccgca cccattgttc ttactgtatt ttttgacaat cttatacgag cgtaattcca
      301 gtggtatgta actctattca ctcctgctcc ttttaacaaa cctcttttaa ccactgtctc
      361 ctcaccttta ggagttacag caattatatt ggtacttgag tcctttttag ctaaagcaag
      421 tagattattt gtctcagcca cttgtttgtt aaccgcctct attttttctg gtgtcatttc
      481 actaccaata gtagaattta ctttatattg ttttagtgaa ctgtcaaaag ttatatattt
      541 tcctgcagta agattatcta attctgttaa agctgactct gaaaaagttt cctcttgttg
      601 ataatcctga accatttgtt cagatgttga tgctaaagca gttgttggta atgccaatga
      661 actagataaa agtacagtag ctaacccccc acaaataatt tttttagttg ttttattttt
      721 catcatcttt ttgctccttt tatgtctgaa tttgttttga actaacaaaa gttactaact
      781 aataattaag cataagtatt agaattttct atacaacctc cttacaaata ctctaacatg
      841 cctcgttcat gtataaccaa aaatgtaatg aaatgtccga ttcttatcgt gaacgacta
//
LOCUS       DASDYK010000273          887 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.281, whole genome shotgun sequence.
ACCESSION   DASDYK010000273 DASDYK010000000
VERSION     DASDYK010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 887)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 887)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.281"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            201..392
                     /locus_tag="U0308_003074"
     CDS             201..392
                     /locus_tag="U0308_003074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012951520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2318016.1"
                     /translation="MSVEHRRFAVAIYAKLKAINMKQSDLAKMLGISNPYLSDIINGK
                     RDASKVRKEIAEILEIDVD"
     gene            411..599
                     /locus_tag="U0308_003075"
     CDS             411..599
                     /locus_tag="U0308_003075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318017.1"
                     /translation="MIIKLDKGSYYSQQELLKQLSIGYETLRKLEIKGELSARKLGKT
                     IYYQGADVLDSWDRMLKR"
     gene            624..809
                     /locus_tag="U0308_003076"
     CDS             624..809
                     /locus_tag="U0308_003076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318018.1"
                     /translation="MNDEIQDLIVEIRKYDPNYIPKSVGKYLLVELQSRHLDHQIKYK
                     KRPKYKHRFANSIERHW"
BASE COUNT          354 a          125 c          160 g          248 t
ORIGIN      
        1 ttctaaagag tactatacta tgttcataag ctaattattt agctaatcaa gacaccaaat
       61 aacccatata atactcgttc cccaacgatt tatggctttt aagaaggctt gtttagctat
      121 gtttatatag tactctatag agttcttttt gtcaacagta tgctaaataa ttagctaata
      181 aggtagaaag gagcaaacac atgtcagtag aacatcgacg tttcgctgtt gcgatatacg
      241 caaaactaaa agcaataaat atgaaacaat ctgatttagc aaaaatgtta ggtattagca
      301 atccttattt atcagatatc ataaacggca aaagagacgc atcgaaagtt agaaaagaaa
      361 ttgcggaaat tttagaaata gatgttgatt agaaaggaga ttgacattaa atgatcatca
      421 aattagacaa gggcagttat tattcgcaac aagagttact taaacaatta agcattggtt
      481 atgaaacatt aaggaaactt gaaatcaaag gagaactttc cgcacgtaaa ctaggaaaga
      541 ctatctacta tcaaggtgca gatgttctag attcttggga caggatgcta aagaggtgaa
      601 tatgaatata agaaggtgtg aagatgaacg acgaaattca agatttaatt gttgaaatac
      661 gaaaatacga cccaaattac attccgaaat cggttggaaa atatttgcta gttgaacttc
      721 aatcaaggca tttagatcat caaattaaat ataagaaaag acctaagtac aagcatagat
      781 tcgcgaattc gattgagcgg cattggtaaa agaaaaaccc acagctataa atagtaagtt
      841 agagcttact aaaaccgtga gttacaaaat aatatttaag gtaatta
//
LOCUS       DASDYK010000274          864 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.282, whole genome shotgun sequence.
ACCESSION   DASDYK010000274 DASDYK010000000
VERSION     DASDYK010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..864
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.282"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            77..>864
                     /locus_tag="U0308_003077"
     CDS             77..>864
                     /locus_tag="U0308_003077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4969 domain-containing protein"
                     /protein_id="HEM2318019.1"
                     /translation="MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVD
                     DPIIPTDENGEATIEGTVDPKSKLTIDGKAVKKDDSGRFTYTYSLPNDNVAEVDVKLL
                     AVRKNYKDEKYTITITNNSKAYNDNMVKQEAIQKEEAEKAEKERKEAEEKAKQEEEAA
                     AAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEALDVLYSTVENDEIFQVLIQ
                     LGDESTIRKDLDKNHLTELARDYMESDATLIQTVSDESFVYESPS"
BASE COUNT          348 a          131 c          166 g          219 t
ORIGIN      
        1 ttaaaaaaac aaggttaatc atgttataat agccattctg tatatttata tctaaacaca
       61 aaaggagccg gaaaagatga aaaaaagagg tttattgttg gtaagtgttt taatgctttt
      121 catttttttg acagtagcat gcgggagttc tgaagacaat gaagaaagtg gagaaataag
      181 tacgaaagaa attgaactta ccgttgacga ccctattata ccaaccgatg aaaacggtga
      241 agcaactata gagggaactg tagatcctaa atccaaatta accattgatg gtaaagccgt
      301 aaaaaaagat gacagcggga gatttactta tacttacagt ttacctaacg ataatgttgc
      361 agaagttgat gtcaaacttc tagcggtcag aaaaaattac aaagatgaaa agtacactat
      421 aactattact aacaattcaa aagcatataa cgacaacatg gttaaacaag aggcaataca
      481 aaaagaggaa gccgagaaag ctgaaaagga acgtaaagaa gcggaggaaa aagcaaaaca
      541 agaagaagaa gctgccgctg caaaagctgc aacgactgat gaaaacactc cttctgatga
      601 taccgtatat ggtactttag ccagtaaaga tactttaaca aaagagggag atgcatttta
      661 taaagatgaa gcacttgatg tactctattc tacagtagaa aacgatgaaa tttttcaagt
      721 acttatacaa ttaggcgacg aaagtacgat tcgaaaagat ttagataaaa atcatttaac
      781 agaattagca cgagattata tggaatctga tgccactctt atacaaactg tctccgatga
      841 atcttttgtt tatgaatctc catc
//
LOCUS       DASDYK010000275          845 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.283, whole genome shotgun sequence.
ACCESSION   DASDYK010000275 DASDYK010000000
VERSION     DASDYK010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.283"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..479)
                     /locus_tag="U0308_003078"
     CDS             complement(<1..479)
                     /locus_tag="U0308_003078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2318020.1"
                     /translation="MPSTDIAYSRTGKITNTSGHAVWTQPCGQINSTLKGPASDYLNK
                     EITIWRKVENKRGTYYQFSETKTPNIKAWLDARAITLYDQVHFNEEYNQMAVISTVIG
                     HAVWSTPYLQSDSKLIAPASNYEGKRVEIIRRAKTTRSIYYQFSYDNKVIGWLDTRA"
     gene            complement(498..836)
                     /locus_tag="U0308_003079"
     CDS             complement(498..836)
                     /locus_tag="U0308_003079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2318021.1"
                     /translation="MLKRNVQKGMISLIAIMMFLSMFSFTNLNSIKTVEAATTAYNTI
                     EYNKSVNLDANIAYPETNAFWSAPYYSEGSTFISSATAPSYAKREAKTERGIYYQVKL
                     GDKIIGWLDK"
BASE COUNT          247 a          145 c          125 g          328 t
ORIGIN      
        1 aaagccctag tgtctaacca accaattact ttattatcat aactaaattg ataatatatt
       61 gaccttgttg ttttggctct tctgattatt tcaactcttt ttccttcata attagaagca
      121 ggcgcaatta atttactatc ggactgaaga taaggtgttg accatactgc atgtccaata
      181 actgtagata taactgccat ctgattgtac tcttcattaa aatgtacttg gtcatagagt
      241 gttatggctc ttgcatctaa ccaagctttt atattaggag ttttggtttc actaaattga
      301 taataagtac ctcttttgtt ttctactttt ctccaaatag ttatttcttt gttaagataa
      361 tcacttgctg gtccttttaa agtagagttt atttgtccgc aaggttgagt ccatactgca
      421 tgtccagaag tgttagtgat tttcccggtc cttgagtaag caatatccgt agaaggcatt
      481 tcataaaatt taaaagctca tttatcaagc caaccaataa ttttgtctcc caattttact
      541 tgatagtaaa ttcctctttc agtttttgcc tctctttttg cataagaagg tgcagttgca
      601 cttgatataa atgttgatcc ttctgaataa tatggtgcag accaaaatgc atttgtttct
      661 ggatatgcaa tattagcatc taaattaact gatttattgt actcaattgt attgtacgca
      721 gttgttgcag cctctacagt tttaatagaa tttaaatttg taaaactgaa cattgataaa
      781 aacatcataa ttgcaattaa actaatcatc cctttttgta catttctctt taacatgatt
      841 ttgtt
//
LOCUS       DASDYK010000276          845 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.284, whole genome shotgun sequence.
ACCESSION   DASDYK010000276 DASDYK010000000
VERSION     DASDYK010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..845
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.284"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            217..>845
                     /locus_tag="U0308_003080"
     CDS             217..>845
                     /locus_tag="U0308_003080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318022.1"
                     /translation="MEMKKLIKCTAPIFIATLIILPVSPSISALANETSEISEGINAT
                     EKTIETEELVVEEISNDEYQVLDKETNETTSIEFSKNHMQSTITNPDGTIDTMIKKDN
                     LIYLNGEVIGEEVKEESRQLLKASAYKYVTTFKTKMSLKKTSASIAVSLAGLLGGPVG
                     VFSTVAGMLLTLKSYAPSKEVYIKIKQYYNSYSREIKNDYSIYKKSNYTG"
BASE COUNT          330 a          121 c          147 g          247 t
ORIGIN      
        1 gtagcaggct gcataaataa tgaataacaa gctaaagtgt ggcttttttt gcaaaaaaaa
       61 tcacaaagtt acacaatatg tgtaagaata agtatcaata accctcactt ttggtcgttc
      121 acgacaagaa tcgggcattt cattacattt ttggttatac attggctttt catgatacat
      181 tacatgtgta agacatataa aggagatggt acataaatgg aaatgaaaaa acttattaaa
      241 tgcactgcac caatctttat tgctacgctc attattttgc ctgtttctcc gtctatttca
      301 gcattggcga atgagacctc agagattagc gaagggatta atgcaacaga aaaaacaatt
      361 gaaacagaag agcttgtcgt agaagaaatt agtaatgatg aatatcaagt actggataaa
      421 gagacaaatg aaacaacttc aattgaattt tcaaaaaatc atatgcaatc tactattaca
      481 aatccagatg gcactataga cacaatgatt aaaaaggata acttaattta cctaaatggt
      541 gaagttatag gtgaagaggt aaaagaagaa tcgagacaat tattaaaagc ctctgcttat
      601 aaatatgtta cgacgtttaa aacaaaaatg tcactaaaga aaacaagtgc atctattgca
      661 gtgtcattag ctggtttgct tggaggaccc gttggagtat ttagtacagt agcaggtatg
      721 ctactaacat tgaaatctta tgccccgagt aaagaggttt atataaaaat taaacaatat
      781 tataatagtt actcaaggga aataaaaaat gattattcta tttataaaaa atctaactat
      841 actgg
//
LOCUS       DASDYK010000277          834 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.285, whole genome shotgun sequence.
ACCESSION   DASDYK010000277 DASDYK010000000
VERSION     DASDYK010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 834)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 834)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..834
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.285"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..274
                     /locus_tag="U0308_003081"
     CDS             <1..274
                     /locus_tag="U0308_003081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2318023.1"
                     /translation="LLYGKEHKDKLYYAMKYLGELIGKTDENGNVSLPPEVTLKVLIE
                     YSTLSKAAFYRQRIHLLEQEILKPHENTFIVQKKVASHYEDQLTSI"
     gene            292..>834
                     /locus_tag="U0308_003082"
     CDS             292..>834
                     /locus_tag="U0308_003082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HEM2318024.1"
                     /translation="MKFNWKVVLLFVLILALIVPVYSKAVETGKELPKSPELQDDKSS
                     TLKNVNTPKNLKASPLTIPANSTIADLFPDEGMAKTVANQLGRTENNNFQTPTKTDWK
                     VDDVVTEVELNRMWYLTSVATIGSIEGIQYLPNLYNVQLQFDDQCKDLSPFLKAPNGY
                     PQLYRLNINNGNISDISPLTE"
BASE COUNT          311 a          130 c          151 g          242 t
ORIGIN      
        1 attactttac ggcaaagagc ataaagataa actatattat gccatgaaat atttgggaga
       61 actcattggt aaaacggatg aaaacggaaa tgtttcgttg ccaccagaag tgacattgaa
      121 agtcttaatt gaatacagta ctttatccaa agcagctttt tatagacaac gaattcactt
      181 attggagcaa gaaattttaa aaccgcatga aaatactttt attgttcaaa aaaaagtagc
      241 aagtcattat gaagaccagc taactagcat ttaaaaggag acataaaaat aatgaaattt
      301 aattggaaag tagttctgct gtttgtttta attttagcac ttattgttcc ggtttattcg
      361 aaggctgtag aaacaggaaa agagttacct aagagtccgg aactacaaga tgataagtca
      421 tctacgttaa aaaatgtaaa tacacctaaa aatctgaaag ctagcccgct aacaattcca
      481 gcgaatagca cgatagcaga tttgtttccc gatgaaggga tggcaaaaac tgtcgcaaac
      541 cagctaggac gaacagaaaa taacaatttt caaacaccta ctaaaacgga ttggaaagtg
      601 gatgatgttg ttactgaggt agagttaaat agaatgtggt acttaacttc agttgctact
      661 ataggaagta tcgaaggcat tcaatatcta cccaatcttt acaatgtaca gttacagttt
      721 gatgaccaat gtaaggattt gtctcctttt ttaaaggcac caaatggata tccacagtta
      781 tatcggttaa atattaataa tggtaatatt tcagatattt cacctcttac tgaa
//
LOCUS       DASDYK010000278          833 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.286, whole genome shotgun sequence.
ACCESSION   DASDYK010000278 DASDYK010000000
VERSION     DASDYK010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 833)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 833)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..833
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.286"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            18..302
                     /locus_tag="U0308_003083"
     CDS             18..302
                     /locus_tag="U0308_003083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkvS family protein"
                     /protein_id="HEM2318025.1"
                     /translation="MHTFFFSKIDATPKIEGVITMAKAHVGDIIEFKDGLTGIVEKLN
                     ENSVIVDLTYMENFKDLGIEEKTVVNHKNYQIIHSVEEDDEVENVEETEE"
     gene            407..>833
                     /locus_tag="U0308_003084"
     CDS             407..>833
                     /locus_tag="U0308_003084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEM2318026.1"
                     /translation="MKLESKKKIAIIGAGPGGLAAGMLLSQLGYQVNIYEKNDRIGGR
                     TALHRMGKYSFDVGPSALTMTHVLTSLFMDCNRNILDYVSLLPINPIHTLYFKDITFP
                     LYSDQSETKAVIQTYFPGEEAGFERFMKENTKKMLYISPL"
BASE COUNT          299 a          124 c          164 g          246 t
ORIGIN      
        1 ttaaggaagg ttcaaaaatg catacattct ttttcagcaa gatagacgca acaccgaaaa
       61 ttgaaggagt gataacaatg gcaaaagcac atgttggaga cattattgaa tttaaggatg
      121 gccttacagg aatcgttgaa aaactcaatg agaattccgt tatagtcgac ttaacttata
      181 tggaaaattt taaagattta ggtattgaag aaaaaacagt ggttaaccac aagaattacc
      241 aaattattca ttctgtagaa gaagatgatg aagttgaaaa tgtagaagaa acagaagaat
      301 aaaaaaacag aatagttttt aagcgcgcaa aaataaagca tttccgagtg ataatgctct
      361 atatttttgc gttttttata tgtatataaa cggggtaaag gagcgtttga aattggaaag
      421 taaaaagaaa attgccatta taggagctgg acctggtggg ttggcggccg gtatgctatt
      481 aagtcaacta ggttatcaag taaacatcta tgaaaaaaat gatcgaattg gtggaagaac
      541 ggcgttacac agaatgggta aatactcatt tgatgtcgga ccttctgcac tcaccatgac
      601 gcatgttttg acttctcttt ttatggattg taatcgtaat attttggatt atgtttcgct
      661 tttaccaatc aatccaattc atacgcttta ttttaaagat atcaccttcc cgctttatag
      721 cgatcaatct gaaacaaaag cggttatcca aacttacttt cctggcgaag aagctggttt
      781 tgaacgcttt atgaaagaaa acacgaaaaa aatgctatat atttcgccgc tca
//
LOCUS       DASDYK010000279          827 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.288, whole genome shotgun sequence.
ACCESSION   DASDYK010000279 DASDYK010000000
VERSION     DASDYK010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.288"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..82
                     /locus_tag="U0308_003085"
     CDS             <1..82
                     /locus_tag="U0308_003085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEM2318027.1"
                     /translation="KVKKNKQVPFVPYIYVSFLLISILIK"
     gene            94..768
                     /gene="radC"
                     /locus_tag="U0308_003086"
     CDS             94..768
                     /gene="radC"
                     /locus_tag="U0308_003086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEM2318028.1"
                     /translation="MLIHEISENEKPREKLQNYGIEALSSSELVALIIETGTKNESVL
                     TIANRIIMKFKNVGEMQYASIEEFQLVNGIGIAKASKIMAAIELGRRIGIVTEQEEVV
                     VRCPEDAVKLVMPELAFLFQEHFHCLFLNTKNQVIYRQTIFVGGLNASIVHPREVFRL
                     ALRKSAASIMCFHNHPSGDPTPSSEDLLVTKRLAEAGNIVGITLLDHIIIGKNKYISL
                     KEKGYF"
BASE COUNT          275 a          131 c          164 g          257 t
ORIGIN      
        1 taaagtgaag aaaaataagc aagttccatt tgttccgtat atatatgttt cctttctgct
       61 gattagtatt ttgataaaat aggagctgtt cttatgttga tacatgaaat atcagagaat
      121 gaaaaaccac gcgaaaagct acagaattat gggatagaag cactttcatc ttcggaattg
      181 gttgctttaa ttattgaaac agggactaaa aatgagtcag ttttgacgat agctaatcga
      241 atcatcatga aattcaaaaa cgtgggcgaa atgcaatatg cttctataga agaatttcag
      301 ttagttaatg gtatcggaat agcaaaagct tctaaaatca tggctgcgat tgaacttgga
      361 agacgtatcg gcatcgtaac ggagcaggaa gaagtggttg ttaggtgtcc cgaagatgcg
      421 gtaaaacttg taatgccaga gcttgctttt ctttttcaag aacatttcca ttgtctattt
      481 ttaaatacca aaaaccaagt aatatatcgg caaacgattt ttgttggtgg tctgaatgct
      541 tccatcgttc atcctagaga agtttttaga ttagcgctca ggaaatcagc agcatcaatc
      601 atgtgctttc acaaccatcc atctggtgat ccgactcctt ctagtgaaga cttgcttgta
      661 acaaaaaggt tagctgaagc tggtaatatt gtcggaatta ccttactaga tcatattatc
      721 attggcaaga ataagtatat tagtttgaaa gaaaaaggtt acttttaaat caagaatact
      781 gttcacaaaa tgtctacaga caacgtttgc taccttatgc taaagtg
//
LOCUS       DASDYK010000280          779 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.289, whole genome shotgun sequence.
ACCESSION   DASDYK010000280 DASDYK010000000
VERSION     DASDYK010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 779)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 779)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..779
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.289"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..289
                     /locus_tag="U0308_003087"
     CDS             <1..289
                     /locus_tag="U0308_003087"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318029.1"
                     /translation="KKAMYINLNDLEREEKEISVKNVGRGIKQWLIDKQQKGKNILIK
                     RTVTKNKVVWTTMKIPEKAVIEVVHAPDYRDLSASIVIKQEQKREIRKFIH"
     gene            314..>779
                     /locus_tag="U0308_003088"
     CDS             314..>779
                     /locus_tag="U0308_003088"
                     /inference="COORDINATES: protein motif:HMM:NF016119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sortase"
                     /protein_id="HEM2318030.1"
                     /translation="MVKFTHRRKPHYKKYMYVGVSIFCCLIVLFLYKTIVHNQEMKQV
                     SQQTAKNISVAYNKDRIKNVIKTDNKTRSDVERLSWKDFISFQGSKEEMNIASNSVGI
                     IEIPSIALSLPIIEGTNNSNLKVGATTFREYQSLTDGNYVLLGHNMGQSGVLF"
BASE COUNT          310 a           94 c          148 g          227 t
ORIGIN      
        1 taaaaaggca atgtacatta atctaaatga tttggaaagg gaagaaaaag agattagtgt
       61 taaaaatgtt ggaagaggaa tcaaacaatg gttaattgat aaacaacaaa aaggaaaaaa
      121 tatcttaata aagcgcacag taactaaaaa taaagttgta tggactacta tgaaaatacc
      181 tgaaaaagct gttatagagg ttgttcatgc ccctgactac agggacttaa gtgctagtat
      241 tgtaattaag caagaacaaa aacgtgaaat cagaaagttt atccattaat agatgtagtt
      301 tagggaggta tttatggtta aatttactca cagaagaaag ccacactaca aaaaatacat
      361 gtatgtaggc gttagtatat tttgttgttt aatagttctc tttttatata agacaatagt
      421 ccataatcag gaaatgaaac aagtaagtca acaaacagcc aaaaatattt cagttgctta
      481 caataaagat aggataaaaa acgttatcaa aacggataat aagaccagaa gtgatgtgga
      541 aagactgtct tggaaggact ttatttcatt tcaaggaagt aaagaggaaa tgaatatagc
      601 ttctaatagt gttggaatta ttgaaatccc aagtattgct ctttctttac caattattga
      661 aggaacaaat aattctaatt tgaaagtagg ggctactact tttcgggaat atcagtcttt
      721 aacagatggg aactatgtgc tacttggtca taacatggga caatctggag tactttttt
//
LOCUS       DASDYK010000281          775 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.290, whole genome shotgun sequence.
ACCESSION   DASDYK010000281 DASDYK010000000
VERSION     DASDYK010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 775)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 775)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..775
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.290"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            74..>775
                     /locus_tag="U0308_003089"
     CDS             74..>775
                     /locus_tag="U0308_003089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016128138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEM2318031.1"
                     /translation="MKQKNKAIVLTVGNYKGGAGKTSNTVLIAYELAKKGLKTLVIDL
                     DPQSNATKCLLLTKSGLYPDEVVTIDKTLMTGIAEKKIDGLEVQIMDNLFLLPSYIDF
                     EDFPKFLYKTTNTKEEEDYYIKNIFDPLEVKYDIILIDVPPMSKAVTRNAVICSDYVL
                     ISLQTHERSLSGAENYVQELNSLNLEYDLDLEVVGVLPVLHKNNGSVDKYIMKTATET
                     FGKENLFDIVIPQMER"
BASE COUNT          307 a          116 c          127 g          225 t
ORIGIN      
        1 aactatatat agaaattaag gaggaatcca attgtcactt tcaaaaaagg ttagaaaaga
       61 cattatctcg tccattaaac aaaaaaacaa agcaattgta ctaactgttg ggaactacaa
      121 aggtggggca ggaaaaacaa gcaatacagt actaatcgcc tatgaactcg caaaaaaggg
      181 actaaaaact ttggtgattg atttagaccc tcaaagcaat gccacaaaat gtttgctttt
      241 aacaaaatct ggactatatc ctgatgaagt agttactatt gataaaacac taatgacagg
      301 tatagccgaa aaaaaaatcg atggcttaga agttcaaatc atggataact tatttttatt
      361 accgtcttat atcgactttg aagatttccc caaattttta tataagacta caaatacaaa
      421 agaagaagaa gactattata ttaaaaatat atttgatcct ttagaagtta aatatgacat
      481 cattttaata gatgttccac caatgtctaa agccgttact agaaatgcag ttatatgttc
      541 agactatgtt ttaatctctc ttcaaactca cgagcgttct ttaagtggag ctgaaaatta
      601 tgtacaagaa ttgaatagtc taaacttgga atatgaccta gatcttgaag tcgtaggggt
      661 actgccagta ttacataaaa acaatggaag tgttgataaa tatataatga aaaccgccac
      721 tgaaaccttt ggtaaagaaa atttatttga tatagtaatt ccgcaaatgg aaaga
//
LOCUS       DASDYK010000282          743 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.291, whole genome shotgun sequence.
ACCESSION   DASDYK010000282 DASDYK010000000
VERSION     DASDYK010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 743)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 743)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..743
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.291"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            226..444
                     /locus_tag="U0308_003090"
     CDS             226..444
                     /locus_tag="U0308_003090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HEM2318032.1"
                     /translation="MYCPKCGHALDNHENQCPNCLTPIIYQSNNNGKAQKAGEIMEES
                     GKLMSGCGCLMTLLITIPVIVILIIMFL"
BASE COUNT          268 a           99 c          127 g          249 t
ORIGIN      
        1 gctacgatct tggctacaga acatattatg aagctgctac ttttttaaat gttactgaaa
       61 aatttttgat tgaagcagta gagaattata gagaaaaata tggactaatg tataataatg
      121 gtaattatat tatacatttt ggctctacca ttcaagtttt ccaggaggat aactcttttt
      181 atccttatga ttatgggtgc taataaattt tgacgaggtg aacatatgta ttgccctaaa
      241 tgcggacatg cactagacaa tcacgaaaat caatgtccta actgtctaac accaatcatt
      301 tatcaaagca acaacaacgg aaaagcacaa aaagccggcg aaattatgga agaatctggt
      361 aaattaatgt caggatgtgg ttgtttaatg acattgttga taactattcc tgtcatagta
      421 attttaataa ttatgttttt ataaaaagga gataacggga tgagtaagta tagttacttg
      481 ttaaaaaaat ggtggttttg ggctcttgct atattatttt tagttatttt attttacagc
      541 ttttgggtaa taatatactt ggtggcacta gcttccttaa tattcgggat agtaaaagtt
      601 gttaaaaatg aaaacagacg aaaatacaca ataatattga ctatatccgc tatatttcta
      661 atcacctttt cactaataag agttgtacag atgtataact atgttattaa taatccagaa
      721 gaaactacag caaatgagca aaa
//
LOCUS       DASDYK010000283          735 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.292, whole genome shotgun sequence.
ACCESSION   DASDYK010000283 DASDYK010000000
VERSION     DASDYK010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 735)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.292"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..206)
                     /locus_tag="U0308_003091"
     CDS             complement(<1..206)
                     /locus_tag="U0308_003091"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318033.1"
                     /translation="MDTILKWFNWGVKSTDEVVFEEKIAELNSRMRRVNEEIDIELKR
                     RECEGFSAYISMQKENLVETKEDH"
BASE COUNT          265 a          140 c           81 g          249 t
ORIGIN      
        1 caatgatctt ctttagtttc cactaagttt tccttttgca tagaaatgta agctgaaaat
       61 ccttcacatt ctcttcgttt taactctata tcaatttctt catttaccct acgcatgcga
      121 ctatttagtt ctgctatttt ttcttcaaaa actacttcat ctgttgattt aactccccaa
      181 ttaaaccatt ttaagattgt atccataagt ttttcatccc tttctatgtt tgtgtgttca
      241 gtctaacaca caaaagttta gaaaaaccaa aaatgtaatg aaatgtccga ttcttgtcat
      301 gaacgacctg ttttgttaac tttttaacac tattttggat acaatttgta attttcaaac
      361 acgataaaaa acctttctat tcctaaataa aaaggctttt tcctatcctc ttataatgct
      421 atcttaaacc caccaatgcc cacaaagcaa agcaattgga gctgcgaaaa tactaaacat
      481 tgcactctct cccaacgttt catctattta tcataaccat aacatggtat actttgagaa
      541 gaataaaaat gggtattatt atacgcaaat atatgaaaag aggataaatc atcatggaaa
      601 aaacaatagg agaaactatt aaatttatac gtacatcaaa aaatattagt caaaaagaaa
      661 tatgtctaga caatatatca agaagttcac ttgtgaaaat tgaaagcaac aaaacaattc
      721 catcctcatt aacac
//
LOCUS       DASDYK010000284          712 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.294, whole genome shotgun sequence.
ACCESSION   DASDYK010000284 DASDYK010000000
VERSION     DASDYK010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..712
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.294"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(76..513)
                     /locus_tag="U0308_003092"
     CDS             complement(76..513)
                     /locus_tag="U0308_003092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318034.1"
                     /translation="MKYEAVFINRFKSLIEEFQLNYKVISEEELALFGSNFALVFLIH
                     FDEVSLNYVCRDKDNSLVSYDVWSYFLHVFDDKDRNNLPKYNSVQERVDISFLILARG
                     LPRHWSSVLNGDDKWLEDYERYELASVPREVIGDLKDSLSLYI"
     gene            complement(503..712)
                     /locus_tag="U0308_003093"
                     /pseudo
     CDS             complement(503..712)
                     /locus_tag="U0308_003093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464648.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          235 a          146 c           80 g          251 t
ORIGIN      
        1 gattctttct tttgagttac cgtctatttt catggttgaa ctcctctttg ctgttacatt
       61 ctcaacattt cttggttaaa tatataaact caaactatcc tttaagtccc cgattacttc
      121 tctaggaaca ctggctaatt catatcgctc ataatcttcc aaccacttgt catctccatt
      181 aagcacacta ctccaatgac gcggaagacc tcttgcaagt attaaaaacg aaatatcaac
      241 ccgttcctgc actgaattat attttggcaa attattccta tctttatcat caaagacatg
      301 caaaaaataa gaccatacat cataactgac aagcgaatta tctttatcac ggcatacata
      361 attcaaagaa acttcatcaa aatgaatcaa aaaaacaagc gcaaaatttg aaccaaaaag
      421 tgctagctcc tcttcagata taactttata atttaactgg aattcttcta ttaatgattt
      481 gaatctattt ataaaaacag cttcatattt cattttgaaa tccttcaatt tttttgccat
      541 tgatattttt tataatagtt tggtaggctg aatactcgtc tttgttaata gctctcggct
      601 cattataaaa cttattctct ttaaactcct ttacccagtc ttttgaccag ataacaattc
      661 atggaaatat ttacttaaac ctctcgcatg aataagtaag ctgttagaaa tt
//
LOCUS       DASDYK010000285          672 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.296, whole genome shotgun sequence.
ACCESSION   DASDYK010000285 DASDYK010000000
VERSION     DASDYK010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 672)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 672)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..672
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.296"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            151..624
                     /locus_tag="U0308_003094"
     CDS             151..624
                     /locus_tag="U0308_003094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uracil-5-)-methyltransferase"
                     /protein_id="HEM2318035.1"
                     /translation="MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWN
                     GKKQKDTSGEENTIAIPGFEKVTLYANETTQAVNFHNPEINDCYFKISLIHPDGSVLW
                     ISDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV"
BASE COUNT          243 a           84 c          140 g          205 t
ORIGIN      
        1 tgcagtcatg gctattgaag caccagagaa tatccaggca ggaaaatata cagggaacgt
       61 tgtgttttcg attaagtatg aatgatgtaa attaaccaga ctagtgatta tgtcacagtc
      121 ctgtggttat gaataaattg gaggttacct atgaagaaga aaagagtagt gattatatcc
      181 ttactactat tgttagtaag tgtcattgga atcagtagtt attttctatt caaggataaa
      241 ataaatctgt tggatgtaga ccattctgcc gttgattgga acggaaaaaa acagaaggat
      301 acaagtggag aagaaaatac aattgccatt ccagggtttg aaaaagtaac gttgtatgca
      361 aatgaaacaa cacaagcagt gaatttccat aatccggaaa ttaatgattg ttacttcaaa
      421 atatcgctta ttcatccgga tggttcggtt ctatggatat ctgatttaat cgaaccggga
      481 aaaggtatgt attccattga attagaaaaa acgttagcgg taggcgaata tgaaaatgca
      541 gtattaaaat atgaatgttt ttctttaaac gatcagtcac ctttaaacgg gtctgaaata
      601 aatttaaaat tagttgtcgt ctagacaaag gaggaaattt tttatgaata aattagtatt
      661 aagtacgtta ag
//
LOCUS       DASDYK010000286          668 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.297, whole genome shotgun sequence.
ACCESSION   DASDYK010000286 DASDYK010000000
VERSION     DASDYK010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.297"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            50..658
                     /locus_tag="U0308_003095"
     CDS             50..658
                     /locus_tag="U0308_003095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2318036.1"
                     /translation="MSFILYKPLINYLSEQAANPRGIIGEITTKIWSSYFEDLSKWTI
                     SNTELSNVTQVLDIGYGGGSNVKNLAELNKNWTIYGVDISEESYKTATNLNKKAINNG
                     KVELSVQDVASMNYQAGIFDVVYAIQTHMYWDNPKKGFEEIYRVMSQKGVLIVSSEKD
                     KIDYHMDEYKTTATLTVLLKEIGFREVVEKEKGNWVLYTIRK"
BASE COUNT          257 a           82 c          136 g          193 t
ORIGIN      
        1 aacaaaaaga aagaaaataa cactaatcat tttgggaggt atcatcggtt tgagttttat
       61 tttatataaa ccattaatta actatttaag cgaacaagcg gcgaatccgc gtgggattat
      121 tggtgaaatc actacgaaaa tatggtcatc ctattttgaa gatttgagta agtggacaat
      181 tagtaatact gaactaagca atgttacaca ggtattagat attggttatg gtgggggctc
      241 caatgttaaa aacctagcgg agctaaataa aaattggact atttacggag tggatatttc
      301 tgaagaatct tataaaacag ccacaaattt gaataaaaaa gcaatcaata atggcaaagt
      361 agagctatct gtacaagatg ttgcatcgat gaattatcaa gcaggtattt tcgatgtagt
      421 ttatgctata caaacccata tgtattggga taatcctaaa aaagggtttg aagaaatcta
      481 tcgagtaatg tcgcaaaaag gtgttttaat agtgtcgtct gaaaaggata aaattgatta
      541 tcatatggac gaatataaaa caactgccac actaacagta ctcttaaaag aaattggctt
      601 tagagaagta gtggagaaag aaaagggaaa ttgggttttg tatacaatca gaaaataatt
      661 gcgagtta
//
LOCUS       DASDYK010000287          652 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.299, whole genome shotgun sequence.
ACCESSION   DASDYK010000287 DASDYK010000000
VERSION     DASDYK010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..652
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.299"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            178..>652
                     /locus_tag="U0308_003096"
     CDS             178..>652
                     /locus_tag="U0308_003096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318037.1"
                     /translation="MKSKTKQIIMIGVVLFQSLFAYPLITMAEENESKSVNTETTLEP
                     KVALEEKTPQKPTLTNNLKQEKTVLQAGETYETVFPDAALATVIAKAATGSEDITQEV
                     SQTDLNKITSLTATSKGIVDLTGIDLLSKLTSLSISGNQITDISALNGLVNLSNLN"
BASE COUNT          241 a          115 c          114 g          182 t
ORIGIN      
        1 tacgcgaatt ttagggcttt aacgaattag atgaaaaaag actaattgtt atgtgtggag
       61 gagtttatgg gatatatact taaataatac ttttcaatga aatagtaggt atttttaact
      121 tgctcattca ttctattatt actgaagatg ctaacaacaa cgagaaggag atagattatg
      181 aaaagcaaaa caaaacagat tatcatgatt ggagtggtcc tttttcaatc actcttcgca
      241 tacccgttaa tcaccatggc ggaagaaaat gaatcgaaat cagtaaatac agaaaccacg
      301 ttagagccta aagtagctct cgaagaaaaa acgcctcaga aacctaccct taccaataat
      361 ctgaagcaag aaaaaactgt ccttcaagca ggcgaaacat atgaaactgt ttttcctgat
      421 gcagctttag ctactgtaat tgcaaaagca gcaactggtt cagaggatat cacgcaagaa
      481 gtatcgcaaa cagacttgaa taaaatcact tcactaactg ctacatctaa agggatagtt
      541 gatttaacag gaatagattt actttcaaaa ttaacctctt taagtataag cgggaaccaa
      601 atcactgata tttctgcact caatggtctc gtgaatttgt ccaatctaaa tg
//
LOCUS       DASDYK010000288          630 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.302, whole genome shotgun sequence.
ACCESSION   DASDYK010000288 DASDYK010000000
VERSION     DASDYK010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..630
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.302"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..495)
                     /locus_tag="U0308_003097"
     CDS             complement(<1..495)
                     /locus_tag="U0308_003097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEM2318038.1"
                     /translation="MEQTALKRESYFDNAKFILIFLVVFGHFLQTFIADYAGVRVLYI
                     YIYTFHMPAFVLISGFFAKSFGKPGYLKKTMKKLILPYVFFQLIYSIFYYFLLSKDNL
                     SIQFLDPEWSLWFLLSLFFWNIMLFIFAKIKPWKSICIALFVGLVAGYFDIIGGYLSL
                     SRTLV"
BASE COUNT          257 a          111 c           97 g          165 t
ORIGIN      
        1 aacaagtgtt cgagataaac tcaaataccc cccaataata tcaaaatagc cagcaaccaa
       61 tccaacgaag agagcaatgc aaatcgactt ccaaggcttt atttttgcaa aaataaataa
      121 cattatattc cagaaaaaca aacttagtaa aaaccaaagt gaccattcag gatcaaggaa
      181 ttggatagaa agattgtctt tacttaaaag aaaataataa aaaatactat atattagctg
      241 aaaaaacaca taaggtaaaa tgagcttttt catcgtcttt tttaaataac cgggcttacc
      301 aaaactttta gcgaaaaatc cggatattag cacgaaagca ggcatgtgaa acgtgtagat
      361 ataaatataa agcacacgaa cacccgcata atccgcgata aatgtttgga gaaaatgtcc
      421 gaaaacaact agaaaaatta gaataaactt ggcattgtcg aaataacttt cccgctttaa
      481 ggcggtttgt tccataaaaa acagtccttt ctattctatg ttgacaaact attgtttatt
      541 ttaccctgaa ttctgtaacg cttatccaac agttaagtaa caaaaagtat caaatattaa
      601 cagggcatga cagctagttg cgaatggaag
//
LOCUS       DASDYK010000289          624 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.303, whole genome shotgun sequence.
ACCESSION   DASDYK010000289 DASDYK010000000
VERSION     DASDYK010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..624
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.303"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..104
                     /locus_tag="U0308_003098"
     CDS             <1..104
                     /locus_tag="U0308_003098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM2318039.1"
                     /translation="KHYAIKLREPIPEDPPILANVGKILISCLKNTI"
     gene            169..525
                     /locus_tag="U0308_003099"
     CDS             169..525
                     /locus_tag="U0308_003099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2318040.1"
                     /translation="MALNAKSITIGLPVSDLEKSASWYEKLFMSDEKLTPVEGVVEYQ
                     IGSVWIQLFEEKINVSENVLRIGVEDLDVEFERLKKLGVITDEVIEDAPGIIRYFVFS
                     DPDGNKLSFYWLYDQE"
BASE COUNT          223 a           70 c          139 g          192 t
ORIGIN      
        1 gcaagcatta cgcgattaag ctgagagaac caataccaga agatccgcca atattagcta
       61 atgtgggaaa aattttaatc tcctgtttga agaacacaat ctagaacaat attgtttgac
      121 tatgaaatgt taaaataatt gcaggctaat gaaaaggaga gataagatat ggctttaaat
      181 gcaaagagta tcactatagg actaccagta agtgatttgg agaaatctgc tagttggtat
      241 gaaaaactat ttatgagtga tgaaaaatta acaccagttg aaggcgttgt tgaatatcaa
      301 attggttcag tttggattca actttttgaa gaaaaaataa atgtttcaga aaacgtttta
      361 cgcatagggg tagaagattt agatgtggaa tttgaacgtt taaaaaaact tggagtaata
      421 actgacgagg tgatagaaga tgcacctggt attattcgat attttgtctt ctctgatcca
      481 gatggtaata agttgtcatt ctattggttg tatgatcagg aatagatttg aacaggatta
      541 taggatggat gtaacgctta aacgacggat gtatgacgtc gttttttgat gttagaaata
      601 atgcttaagt ggggtaagat ataa
//
LOCUS       DASDYK010000290          614 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.304, whole genome shotgun sequence.
ACCESSION   DASDYK010000290 DASDYK010000000
VERSION     DASDYK010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 614)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.304"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            34..>614
                     /locus_tag="U0308_003100"
     CDS             34..>614
                     /locus_tag="U0308_003100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase SNF2"
                     /protein_id="HEM2318041.1"
                     /translation="MKMTLLDNQKQALIKLKKYKVGALFMKPGSGKTRVACELINDVN
                     PDYVLWITPFQTKENLEIEISKWGYSFPQEIIGIESLSNSDRLYLYCRNKLKNSTNSY
                     IIMDESLKIKNIHALRTQRAIKLSRLATYKLIMNGTPLSRNILDLWSQLEFLSPKILN
                     LSFSQFKKTFCEYVTITQLTQSTQQSMDIIKKY"
BASE COUNT          242 a          111 c           86 g          175 t
ORIGIN      
        1 atattcctaa aaaaatagaa aaagatgtga taattgaaaa tgaccttatt agataaccag
       61 aaacaagcat taataaaact caaaaaatat aaggttggcg ctctatttat gaaaccagga
      121 agtgggaaaa cacgggtagc ttgcgagtta ataaatgatg taaacccaga ttatgtttta
      181 tggattaccc cttttcaaac taaagaaaat ctcgaaattg aaataagcaa atggggttat
      241 tcattccctc aagaaattat cggcattgag tctctctcca actcagatag attatacctg
      301 tattgccgaa acaaactcaa aaattccacc aatagttaca ttattatgga tgaaagccta
      361 aagataaaaa atatccatgc acttcgaaca caacgagcga ttaaactttc tcgtctggct
      421 acctataaat taattatgaa cggcacacct cttagtcgta atattttgga tttatggtca
      481 cagctagaat ttctatctcc taaaatatta aatctaagtt tttcccagtt caaaaaaact
      541 ttttgcgaat acgtcaccat tacacaacta acacaaagta cgcaacaatc aatggatatc
      601 attaaaaaat atca
//
LOCUS       DASDYK010000291          611 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.305, whole genome shotgun sequence.
ACCESSION   DASDYK010000291 DASDYK010000000
VERSION     DASDYK010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..611
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.305"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            176..249
                     /locus_tag="U0308_003101"
     tRNA            176..249
                     /locus_tag="U0308_003101"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:210..212,aa:Thr,seq:cgt)
     gene            259..342
                     /locus_tag="U0308_003102"
     tRNA            259..342
                     /locus_tag="U0308_003102"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:293..295,aa:Tyr,seq:gta)
     gene            354..425
                     /locus_tag="U0308_003103"
     tRNA            354..425
                     /locus_tag="U0308_003103"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:386..388,aa:Gln,seq:ttg)
     gene            435..507
                     /locus_tag="U0308_003104"
     tRNA            435..507
                     /locus_tag="U0308_003104"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:468..470,aa:Lys,seq:ttt)
BASE COUNT          180 a          116 c          124 g          191 t
ORIGIN      
        1 cgaatcccgt acgggtcact ttttaatcaa aaataacaac ttcaaaaata tttttcactt
       61 tttttaaaaa aaagctggta aaattgatta aaatgttata tcatgtatta gtatctgttt
      121 tgaagaatta attatgcaag agatttcgat ttgccagcag tgagagcgat tcttcgccga
      181 cttagctcaa tctggtagag caactgaatc gtaatcagta ggttgcgggt tcaattcctg
      241 cagtcggcat tttatagcgg aggggtagcg aagtggctaa acgcggcgga ctgtaaatcc
      301 gctccttcgg gttcggtggt tcgaatccac tcccctccac cattttctat tattgggcta
      361 tagccaagcg gtaaggcaac ggattttgat tccgtcatgc gctggttcga atccagctag
      421 cccagtcata tttagagccg ttagctcagt tggtagagca tctgactttt aatcagaggg
      481 tcgctggttc gaacccagca cggctcatca taaaaaaaca agcaaagaaa atactttgct
      541 tgttttttta tgatgtaatt ttttctccct aagaaaaaag ataaactaaa aattaaatag
      601 tttatctttt a
//
LOCUS       DASDYK010000292          572 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.309, whole genome shotgun sequence.
ACCESSION   DASDYK010000292 DASDYK010000000
VERSION     DASDYK010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.309"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>572
                     /locus_tag="U0308_003105"
     CDS             <1..>572
                     /locus_tag="U0308_003105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM2318042.1"
                     /translation="IHYYVAMHLLRDRMNCQIDTTRQFKVALYKACTEESKKSESAFI
                     KKVAKQLPNRNYKEMTYTTQIILSTIVAFGSYSSIEKMPSFFYMDEQLEEMGFMKLVD
                     FASEQVNDNLSIPFSEKEMELLRYSFASINYRYFLLDNLINKFNNIVPGYTNLDRNIR
                     KIHKVNHLEPLISQLVNLKEMDSLKPFEERL"
BASE COUNT          210 a           88 c           97 g          177 t
ORIGIN      
        1 attcattatt atgtcgctat gcatttatta agagatcgaa tgaattgtca aattgataca
       61 actaggcagt ttaaagtggc cctatataag gcttgcaccg aggagtctaa gaaatcagaa
      121 agtgcgttca ttaaaaaagt agcgaaacaa cttcctaata ggaactataa agaaatgacc
      181 tacacgacgc aaattatact gagtaccatt gttgctttcg gtagttattc ttccattgaa
      241 aaaatgcctt cttttttcta catggatgaa cagttagaag aaatgggctt catgaaacta
      301 gttgattttg ccagtgaaca agtaaatgat aatctctcta ttccattttc agagaaagag
      361 atggaattgc tccgttactc ctttgcgagt ataaattata gatatttctt acttgataat
      421 ttaatcaata agttcaataa tattgtgcca gggtatacaa atcttgatcg aaatataaga
      481 aaaatccata aagtgaatca cctagaacca ttgattagcc aattagtaaa tctaaaagaa
      541 atggattcat taaaaccgtt tgaagaaaga ct
//
LOCUS       DASDYK010000293          566 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.311, whole genome shotgun sequence.
ACCESSION   DASDYK010000293 DASDYK010000000
VERSION     DASDYK010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..566
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.311"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..375)
                     /locus_tag="U0308_003106"
     CDS             complement(<1..375)
                     /locus_tag="U0308_003106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318043.1"
                     /translation="MKKILVPILLLATILASCSSPNEKITKDTKISKTITIRADYKIP
                     KDIKELEDNSANIVKVKFLQNKTIGKDGSTISEIEILTSYKGNLEKGSKVDISEPWYL
                     SDGKYVAVENYIALDKGQEYTIF"
BASE COUNT          164 a           96 c           78 g          228 t
ORIGIN      
        1 aaaaatggta tattcttgtc ccttatctaa tgcaatatag ttttcaacag cgacatattt
       61 accatcgctt aaataccacg gttctgaaat atctacttta ctcccttttt ctaggtttcc
      121 tttgtaacta gtcaaaattt ctatctcgct aatagtacta ccatccttgc ctatcgtttt
      181 attttgaaga aatttcactt taacaatatt agcactatta tcctcaagtt ctttaatatc
      241 ttttggaatt ttgtaatctg ctcttattgt gatagtcttg gatattttag tgtctttggt
      301 tattttttca ttcggcgagg aacagcttgc taagattgtt gctaacaata atatgggcac
      361 tagaatcttt ttcaatagta gagtcctcct tatatgtatt attcagctta ccttccctta
      421 aattttagca taggtagatt atgttttata gtacaatcca tagtgaaaaa acggcttttt
      481 attgcgttta ttgctaaatt gttaacagat tgctcgtttg actataatta ttcacaaaaa
      541 aacaaaacca attaatgagg gttttg
//
LOCUS       DASDYK010000294          555 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.312, whole genome shotgun sequence.
ACCESSION   DASDYK010000294 DASDYK010000000
VERSION     DASDYK010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.312"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            46..282
                     /locus_tag="U0308_003107"
     CDS             46..282
                     /locus_tag="U0308_003107"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318044.1"
                     /translation="MINSTEQAKFMKQMAEALMVQVGVDPKKWREDILLQGYQNFVLQ
                     NSKHVIQVIETHDQRTSSQKSFKPDQPKQEHKSQ"
     gene            300..>555
                     /locus_tag="U0308_003108"
     CDS             300..>555
                     /locus_tag="U0308_003108"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318045.1"
                     /translation="MSVWKNVILDYYSRLLAMDWFSNAINAINNLTSKFQPLLIVAAI
                     LCLLMAGALFMMGDDMKRSAKGWILGILIGVFIISSCTALI"
BASE COUNT          202 a           79 c          104 g          170 t
ORIGIN      
        1 tgaaaatgat ctatacggaa atttaaaaga gaggagctaa aatatatgat aaattctaca
       61 gaacaagcta aatttatgaa acaaatggca gaagcactca tggtacaagt tggagtagat
      121 ccaaaaaaat ggcgtgaaga tatccttctt caaggatatc aaaattttgt gttacaaaac
      181 tccaagcacg taatccaagt tatcgaaacg catgatcaaa gaacaagttc acagaaaagt
      241 ttcaagccag atcaacctaa gcaagaacac aaatcacaat aaaaagggag tttttattta
      301 tgtcagtttg gaaaaatgta attttagact attattcacg attattagca atggattggt
      361 ttagcaatgc gattaacgct attaacaact taacatctaa gtttcagcca ctattaattg
      421 tagcagctat tctttgtttg ttgatggcag gagctttatt tatgatgggt gatgatatga
      481 agcgttcagc caagggctgg attcttggta ttttaattgg tgtgtttatt atttcaagtt
      541 gtacagcact aatta
//
LOCUS       DASDYK010000295          527 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.316, whole genome shotgun sequence.
ACCESSION   DASDYK010000295 DASDYK010000000
VERSION     DASDYK010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..527
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.316"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            251..>527
                     /locus_tag="U0308_003109"
     CDS             251..>527
                     /locus_tag="U0308_003109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lmo1656 family SNX6-recruiting virulence factor"
                     /protein_id="HEM2318046.1"
                     /translation="MNRKMRLLKGLMAFIVGVSIIATPIITVYAASNKVAISMNRRAV
                     NGATNGKYHSLNKGTVKLKVSAKGFGNSNPNSWVTLHKEKFGIDDYFG"
BASE COUNT          190 a           74 c           99 g          164 t
ORIGIN      
        1 tggattgata tgtatttttg tgataaatag aaacaggaat gtttaaaatg tgaatagtaa
       61 ctgataatga gtattatctt ataaccaaaa aacttaatga tactcacgtt gtgtaaaaat
      121 atctctaata agctccattt tctagtcgtt cacgacaaga atcggacatt tcattacatt
      181 tttggttata catcgctttt ttatgatact cttgcattgc aactattgat tacaaaaagg
      241 aggcaacaag atgaacagaa agatgagatt attaaaagga ctaatggctt tcattgtagg
      301 tgtaagcatt atagcaaccc caattattac agtctatgca gcaagtaata aagtagccat
      361 ttcgatgaac cgtcgagctg taaatggtgc tacaaatgga aaatatcatt cattgaacaa
      421 aggaacggtt aaattgaaag tttcggctaa aggtttcggg aatagtaacc ccaactcgtg
      481 ggtaactttg cacaaagaga aatttggaat agatgattat tttggca
//
LOCUS       DASDYK010000296          492 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.320, whole genome shotgun sequence.
ACCESSION   DASDYK010000296 DASDYK010000000
VERSION     DASDYK010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 492)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 492)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..492
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.320"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            61..>492
                     /locus_tag="U0308_003110"
     CDS             61..>492
                     /locus_tag="U0308_003110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318047.1"
                     /translation="MLKLYKKEQNQILYAKYWINNDKAIVHFGKIGKVGQKEETSNYL
                     EKYKSKAAFHEAFINRFVPQSYSENPPNENFWILIQYPLKSLTRTKRDIWLKDRVTDV
                     LNDDLGWKGLGIVDGFDIGQTANPNKQFALNIFCVVVDEEIG"
BASE COUNT          189 a           68 c           97 g          138 t
ORIGIN      
        1 gttacaatga ataaaactct ctaatacaga gtccaatttt atacatcatg aggtgaaaac
       61 atgttaaagc tatacaaaaa agaacaaaat caaatcttgt atgctaagta ctggataaat
      121 aatgataagg caattgtgca cttcggtaaa attggtaaag taggacagaa agaagaaacc
      181 agcaactatc tggaaaaata caagagcaaa gctgcgttcc atgaggcgtt tattaatcga
      241 tttgtcccac aaagttatag cgaaaatcct ccaaatgaaa atttctggat attaattcaa
      301 tatccgctca aaagtttaac aagaacaaaa cgtgatattt ggctgaaaga tcgagtaaca
      361 gatgttttaa atgacgattt ggggtggaaa ggtttaggga ttgtagatgg ttttgacata
      421 ggtcaaaccg cgaatcctaa caagcaattt gctttaaata tattttgtgt cgttgttgat
      481 gaagaaatag gt
//
LOCUS       DASDYK010000297          483 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.322, whole genome shotgun sequence.
ACCESSION   DASDYK010000297 DASDYK010000000
VERSION     DASDYK010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..483
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.322"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            127..402
                     /locus_tag="U0308_003111"
     CDS             127..402
                     /locus_tag="U0308_003111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318048.1"
                     /translation="MKKQVRLKILKLDAKKSVGILTQQAREEIAMIQKGNEKIGDELK
                     FIQDKLADAFESRTAKAVQSWMKHIREEELEEQKEVLVICKESIRMD"
BASE COUNT          202 a           53 c           96 g          132 t
ORIGIN      
        1 aatacgcacg tgcaattggg gatacatctt atgatttgag ctatcacttc aaattattga
       61 gcgagaactc aagaaaaaaa tttaactgcc aaagaacgtt cgaatttact tgtagcagaa
      121 agtactttga aaaaacaagt tcgattgaaa atcttaaagc tagatgcaaa aaaatcagta
      181 ggaatactaa ctcagcaagc tagagaagaa atagctatga ttcaaaaagg aaatgaaaaa
      241 attggagatg aattaaaatt tattcaagat aaattagcgg atgcatttga atccagaact
      301 gcaaaagctg ttcaaagttg gatgaagcat atccgggaag aagaattgga agagcaaaaa
      361 gaggttcttg ttatttgtaa agaaagtatc agaatggatt aatatagcgg tgaaggttat
      421 atttgaagga tatatcacgt aaaataaaaa tattgaagat attgatagaa atttcttagt
      481 ttt
//
LOCUS       DASDYK010000298          482 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.323, whole genome shotgun sequence.
ACCESSION   DASDYK010000298 DASDYK010000000
VERSION     DASDYK010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..482
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.323"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(141..>482)
                     /locus_tag="U0308_003112"
     CDS             complement(141..>482)
                     /locus_tag="U0308_003112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2318049.1"
                     /translation="KSITIGLPVSDLEKSASWYEKLLMSDEKLVPVEGVIEYQIGSVW
                     IQLFEEKINASKNVLCLEAENLEVEFERLKTLGIITNEVIEELSGILRYFDFTDPDGN
                     KLSFYWLYEQE"
BASE COUNT          161 a          105 c           58 g          158 t
ORIGIN      
        1 ataaaacgaa gacaaaaaaa aagtacacct aatcgaaaaa taatctctaa cttatatttc
       61 actccactta agcatcaaaa aacgacgaat caattatccg tcgttttagc gttacgctca
      121 tcatataatg ctgtttaagt ctattcttgt tcgtataacc aatagaatga taacttatta
      181 ccatctggat cagtgaagtc aaaatatcga aggatacctg atagctcttc tatcacctcg
      241 ttagttatta tcccaagtgt ttttaaacgt tcaaattcta cttctagatt ttctgcctct
      301 aagcacaaaa cgttcttaga agcattgatt ttttcttcaa aaagttgaat ccaaaccgaa
      361 ccaatttgat attcaataac cccttcaacc ggtactagtt tttcatcact cataagcagt
      421 ttttcatacc agcttgcaga tttctccaaa tcacttactg gcagccctat agtgatactc
      481 tt
//
LOCUS       DASDYK010000299          467 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.328, whole genome shotgun sequence.
ACCESSION   DASDYK010000299 DASDYK010000000
VERSION     DASDYK010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..467
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.328"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..455)
                     /locus_tag="U0308_003113"
     CDS             complement(<1..455)
                     /locus_tag="U0308_003113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="internalin N-terminal domain-containing protein"
                     /protein_id="HEM2318050.1"
                     /translation="MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAP
                     INQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIEYLTNLE
                     YLNLNGNQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLN"
BASE COUNT          135 a           85 c           71 g          176 t
ORIGIN      
        1 tcattaagat atagctccct taaattagtt aagttttgca aggcactaat atcagtgatt
       61 ttattagttc caatatacag attcgttaat ttaactaaat tacttaatgg gctaatatca
      121 gtaatttggt ttccattaag gtttaagtac tccaaattag ttaaatactc gatcccttga
      181 atggaggcta ctttttcccc ggctactact aatttcgtaa tgctttctaa ttcttcttgt
      241 gtcactacat ctgtgacact tgctttttga agcactgctc gtattccttc tgctaaatct
      301 gcatctggga aaatttgatt aattggagct ggtggcgtgg ctaaagttgc tgctttaacc
      361 tcattattac cctgaatacc taataccatg aacaaaaggc tcaagacagt cattatggaa
      421 attaattgtt taaaaaaatt atttttcgct ttcattttag taccttc
//
LOCUS       DASDYK010000300          466 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.329, whole genome shotgun sequence.
ACCESSION   DASDYK010000300 DASDYK010000000
VERSION     DASDYK010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 466)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 466)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..466
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.329"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(51..455)
                     /locus_tag="U0308_003114"
     CDS             complement(51..455)
                     /locus_tag="U0308_003114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HEM2318051.1"
                     /translation="MNPRKSEFVLTLIAGITGIIAGITGIAGGGLLAALSGSEELSNA
                     TAMTAADSEALAAAGGLTVIFSIIALVLGIALIVFAVLIKRNAKVFGILTLVAGVVGF
                     FLVGLLWIVPGVLAVIAGIMCLARKVPTDTFS"
BASE COUNT          170 a          105 c           73 g          118 t
ORIGIN      
        1 aaaaactgca acagaatgat tcctcatcct attacagtct agcattaaga ttagctaaat
       61 gtgtcagttg gtacttttct cgctaggcac ataatacctg caataacagc aagtacacct
      121 ggaacgatcc atagtaatcc tactaagaag aaacctacaa caccagctac tagcgtcaag
      181 ataccgaata ctttagcatt gcgtttaatt aatacagcaa aaacaatcaa agcaatacca
      241 agcactaaag caattataga gaaaattact gttaaaccac ctgcagcagc aagtgcttca
      301 gagtcagcag cagtcatcgc agttgcgtta gataattctt cactgccaga aagagcagca
      361 agtaaacctc cgcccgcgat tccagtaata ccagcaataa tacctgtaat tcccgcaatt
      421 aatgttagaa caaattctga ttttcttgga ttcattatga tataaa
//
LOCUS       DASDYK010000301          453 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.330, whole genome shotgun sequence.
ACCESSION   DASDYK010000301 DASDYK010000000
VERSION     DASDYK010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.330"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..318
                     /locus_tag="U0308_003115"
     CDS             <1..318
                     /locus_tag="U0308_003115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HEM2318052.1"
                     /translation="LLKASKKAYIKAKYTWWGMQIQFSHKAVVDFNDFYWGAGTIGGL
                     GANKRMGKFLAKKGIKIASRYAVCLSLFGGGLAWGMGKKDKGKGVNLNCVLYVPATIT
                     TAK"
BASE COUNT          163 a           44 c           98 g          148 t
ORIGIN      
        1 cttcttaagg catctaaaaa agcttatata aaagctaaat atacatggtg gggtatgcaa
       61 atccaatttt ctcataaagc tgttgttgat tttaacgatt tttattgggg ggcaggtacg
      121 ataggtggat taggtgcaaa taaacgaatg gggaaatttt tagcaaaaaa aggaataaaa
      181 atcgcatcac gttatgctgt ttgtttgagt ttatttggtg gtggtttagc atggggaatg
      241 ggtaaaaaag ataaaggaaa aggtgtaaat ttaaattgtg tattatatgt ccctgcgaca
      301 ataactacag ctaaataaaa gaaaagagtg tatacatgaa aagaaataaa ctaaagataa
      361 tatttcgaat aatagagttg gtattgggaa ttttaattat tatcgcaaca tctgtattat
      421 attttatgga tattatttct ggtggagcct ctg
//
LOCUS       DASDYK010000302          448 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.333, whole genome shotgun sequence.
ACCESSION   DASDYK010000302 DASDYK010000000
VERSION     DASDYK010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 448)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 448)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.333"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(6..446)
                     /locus_tag="U0308_003116"
     CDS             complement(6..446)
                     /locus_tag="U0308_003116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_038330224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HEM2318053.1"
                     /translation="MYREQYPELTIIEDRNMEYAHKGLYINQHILVNPNQNDTEMRCT
                     LAEEIGHYKLTVGNITKQKTINDIKQEKLARNWGYKSLVPLRKIIDAYYEGFTEYYEV
                     SEFLEVTEDFLKHSIEYYRSKFGNTIECNGYIIILRSSIQIIAC"
BASE COUNT          133 a           91 c           60 g          164 t
ORIGIN      
        1 aatacctaac aagcaataat ctgtatacta cttctaagaa taattatata tccattgcac
       61 tcaatcgtat ttccaaactt gcttctataa tattcaattg aatgctttaa aaaatcttca
      121 gttacttcta aaaactctga aacctcgtag tactcagtaa aaccttcata ataagcatca
      181 ataattttac gcaaggggac taatgattta taaccccagt ttctcgcaag cttttcttgc
      241 tttatgtcat taatcgtttt ctgcttagtg atgttaccaa cagtcaattt gtaatgccca
      301 atctcctctg ccaatgtgca acgcatctcg gtatcgttct gatttgggtt tacaagaata
      361 tgctgattga tatacagtcc cttatgagca tattccatgt ttctgtcttc tatgatagtt
      421 agctctggat attgctctct gtatatat
//
LOCUS       DASDYK010000303          396 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.337, whole genome shotgun sequence.
ACCESSION   DASDYK010000303 DASDYK010000000
VERSION     DASDYK010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 396)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 396)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.337"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            20..>396
                     /locus_tag="U0308_003117"
     rRNA            20..>396
                     /locus_tag="U0308_003117"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          128 a           74 c          115 g           79 t
ORIGIN      
        1 tacttcgtag aagtaaattg gttaagttag aaagggcgca cggtggatgc cttggcacta
       61 ggagccgaag aaggacggga ctaacaccga tatgctttgg ggagctgtac gtaagcgttg
      121 atccagagat ttccgaatgg gggaacccac tatctttagt cggatagtat ccttacgtga
      181 atacatagcg tgaggaaggc agacccaggg aactgaaaca tctaagtacc tggaggaaga
      241 gaaagaaaaa tcgatttcct gagtagcggc gagcgaaacg gaaagagccc aaaccaagaa
      301 gcttgcttct tggggttgta ggacactcta tacggagtta caaaagaaag ttataaatga
      361 agcggtctgg aaaggcccgc caaagacggt aacagc
//
LOCUS       DASDYK010000304          390 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.338, whole genome shotgun sequence.
ACCESSION   DASDYK010000304 DASDYK010000000
VERSION     DASDYK010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 390)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.338"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(37..>390)
                     /locus_tag="U0308_003118"
     CDS             complement(37..>390)
                     /locus_tag="U0308_003118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003721649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318054.1"
                     /translation="KMGLNGLGSLNTLFDFSIQNPYLADFGFGFMACLMAGMAGLIAT
                     SSSLFFLNKKFAYPAAFFIWFLMILPNNSIMFIFQPFTEYGFEIILPIFLVFSLIVLI
                     IVGVLYLYEVKYVKE"
BASE COUNT          169 a           64 c           58 g           99 t
ORIGIN      
        1 aaaaagagga acatggaaaa aattagaaga aaatatctac tctttaacat atttcacctc
       61 atataagtaa aggacaccaa caattatcaa aactattaaa ctgaaaacta gaaaaatagg
      121 caaaattatt tcaaagccat attctgtaaa aggttggaaa ataaacataa ttgaattgtt
      181 tggaagtatc atcagaaacc aaataaaaaa tgcagctgga tacgcaaatt ttttattcaa
      241 aaagaacaga ctggagctag tggcgataag tccagccatt ccggccatta agcaagccat
      301 aaatccaaaa ccaaaatctg ctaagtaggg gttttgaatg ctaaaatcaa atagagtatt
      361 aagcgatcct aatccattta accccatttt
//
LOCUS       DASDYK010000305          380 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.340, whole genome shotgun sequence.
ACCESSION   DASDYK010000305 DASDYK010000000
VERSION     DASDYK010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.340"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
BASE COUNT          142 a           60 c           69 g          109 t
ORIGIN      
        1 accaattgtg taattcacga gtaatcatct cctattttaa atggatatgg tgttaactcc
       61 agcatactac ataaaaagga gcggggaaag atagtttgga atactcgtaa gtccctttgc
      121 aagctgccag agataaattt ggatgagatt aaacttctca tggtggacaa tgaaacggtt
      181 ggcacgtata aatttattaa ttcatgctaa actctgagaa taccacaatt aatactgaat
      241 atgtcagcta cgcaacacca aatgaaaaag aagtcaaatt attacaaaaa gaaatttcaa
      301 gtgatgaacc tgtttaccta tatatggata agattactag tttagaagta cagataacct
      361 tggtaaacga atgctatcgt
//
LOCUS       DASDYK010000306          377 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.denovo.341, whole genome shotgun sequence.
ACCESSION   DASDYK010000306 DASDYK010000000
VERSION     DASDYK010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.denovo.341"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            18..>377
                     /gene="inlC"
                     /locus_tag="U0308_003119"
     CDS             18..>377
                     /gene="inlC"
                     /locus_tag="U0308_003119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 3 internalin InlC"
                     /protein_id="HEM2318055.1"
                     /translation="MKKNNWLQNAVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQ
                     IFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELH
                     LSHNQISDLSPLNDLTKL"
BASE COUNT          142 a           63 c           68 g          104 t
ORIGIN      
        1 ttaaggagtg gagaatgttg aaaaaaaata attggttaca aaatgcagta atagcaatgc
       61 tagtgttaat tgtaggtctg tgcattaata cgggttctgg gacaaaagta caagctgaga
      121 gtattcaacg accaacgcct attaaccaaa tttttccaga tcccggccta gcgaatgcag
      181 tgaaacaaaa tttaggaaag caaagtgtta cagaccttgt atcacaaaag gaactatctg
      241 gggtacaaaa tttcaatgga gataatagca acattaaatc tcttgccgga atgcaatttt
      301 tcactaattt aaaagaactt catctatccc acaatcaaat aagtgacctt agtcctttaa
      361 atgatctaac taaatta
//
LOCUS       DASDYK010000307         3408 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.guided.180, whole genome shotgun sequence.
ACCESSION   DASDYK010000307 DASDYK010000000
VERSION     DASDYK010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3408
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.guided.180"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..117)
                     /locus_tag="U0308_003120"
     CDS             complement(<1..117)
                     /locus_tag="U0308_003120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HEM2318056.1"
                     /translation="MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESI"
     gene            224..604
                     /locus_tag="U0308_003121"
     CDS             224..604
                     /locus_tag="U0308_003121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEM2318057.1"
                     /translation="MTKPLKLVYTENGFDTGSFLIDDKLTEYSPADLMLMSIASCSAI
                     VFRNILKKKRVNFTDLWVDATMERIPEEENRISAIHLHFKITGAALDPKALEKALKLT
                     PKYCSMVRSVEKSILVDESLEIMP"
     gene            669..2048
                     /gene="rlmD"
                     /locus_tag="U0308_003122"
     CDS             669..2048
                     /gene="rlmD"
                     /locus_tag="U0308_003122"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HEM2318058.1"
                     /translation="MNQNPVEEGQKFPLTIRRMGINGEGIGYFKKAVVFVPGAITGEE
                     VVVEAVKVRDRFTEAKLNKIRKKSPNRVTAPCPVYEACGGCQLQHVAYSAQLELKRDI
                     VIQSIEKHTKIDPTKLKIRPTIGMEDPWRYRNKSQFQTRMVGSGQVETGLFGANSHQL
                     VPIEDCIVQQPVTIKVTNFVRDLLEKYGVPIYDEKAGSGIVRTIVVRTGVKTGETQLV
                     FITNSKKLPKKREMLAEIEAALPEVTSIMQNVNQAKSSLIFGDETFLLAGKESIEEKL
                     MELEFDLSARAFFQLNPFQTERLYQEVEKALVLTGSETLVDAYCGVGTIGQAFAGKVK
                     EVRGMDIIPESIEDAKRNAEKNGIENVYYEVGKAEDVLPKWVNEGFRPDAVIVDPPRS
                     GCDQGLIKSLLDVEAKQLVYVSCNPSTLARDLALLAKKYRIRYMQPVDMFPQTAHVET
                     VVLLQLKDK"
     gene            2063..2464
                     /locus_tag="U0308_003123"
     CDS             2063..2464
                     /locus_tag="U0308_003123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fosfomycin resistance thiol transferase FosX"
                     /protein_id="HEM2318059.1"
                     /translation="MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKE
                     KFFLIAGLWICIMEGDSLQERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQG
                     EGRSIYFYDFDNHLFELHAGTLEERLKRYHE"
     gene            2493..2846
                     /locus_tag="U0308_003124"
     CDS             2493..2846
                     /locus_tag="U0308_003124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318060.1"
                     /translation="MKKLFDETNEFEAKYYRTIWYGYIDNEFAPELSDEIKQLIQSDL
                     TEKTANPIEATHWVFYSETQAGDAIGDKVRSSIMVRHRDNKFVVHYNVSDFQFVTVFD
                     VATAFKDQLEQALNA"
     gene            complement(2886..3092)
                     /locus_tag="U0308_003125"
     CDS             complement(2886..3092)
                     /locus_tag="U0308_003125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318061.1"
                     /translation="MKLIGKHPSGRAIIIRLNNQEYHYETANSFGSATSLTRAKTEAR
                     ADSFTSSEMNQGLHIGNWHWKELG"
     gene            complement(3120..>3408)
                     /locus_tag="U0308_003126"
     CDS             complement(3120..>3408)
                     /locus_tag="U0308_003126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HEM2318062.1"
                     /translation="AIEAARAGDAGRGFSVVAEEVRKLSSRVEEAIKEVEKSVNGITQ
                     EINTISSGTERVEAKVEESQEVLILSLEDFSQIESASTALDQNAGAFTKMI"
BASE COUNT         1116 a          678 c          656 g          958 t
ORIGIN      
        1 aatgctttca taaaatgcct ttgttccgag ttcatttgcg attagctctg tatagctact
       61 tttcccagca ccaatcattc ctgctaaaac aatcacttta tttcctactc cttccataac
      121 atgagtagcc tccttttttg gtcgactatc tgttcattat actactaatt tgcttaataa
      181 ggagattttt tgtacgataa aagagaagaa atgagggata accatgacaa aaccattaaa
      241 gctagtttat accgaaaatg ggtttgacac aggaagtttt ttaatcgatg acaaactgac
      301 cgaatattca ccagcggatt tgatgttaat gtctattgcc agttgtagcg ccattgtttt
      361 tcgtaacatt ttaaagaaaa aacgagtaaa ctttaccgac ttatgggtag acgccacaat
      421 ggaacgcatc ccagaagaag aaaatcgtat aagcgcgata catcttcatt ttaaaataac
      481 cggtgctgcc ttggatccaa aagcacttga aaaagcatta aaattaacac cgaaatactg
      541 ttcgatggtt cgttctgtcg aaaaaagcat ccttgtcgat gaaagtcttg aaatcatgcc
      601 ataaactact gacaagctgc tgtttttttg ttagtattaa tgaagacttg gaatgatgga
      661 ggaaaataat gaatcaaaat ccagtagaag aaggacaaaa attcccgcta actattcggc
      721 gcatgggaat caacggggaa ggaatcggct actttaaaaa agcagttgta tttgtacctg
      781 gcgcaattac cggtgaagaa gtagttgtcg aagcggtcaa agttcgtgat cgtttcaccg
      841 aagcaaaatt aaataaaatt cgtaaaaaat ctccaaaccg agttaccgca ccttgcccag
      901 tttacgaggc gtgtggtggt tgccagttgc aacatgtggc ctatagcgcc caacttgaac
      961 taaaaagaga tattgttatt caatcaatcg aaaaacatac aaaaatcgat ccaaccaaat
     1021 taaaaatccg cccaacaatc ggaatggaag acccatggcg ttaccgtaat aaaagccaat
     1081 tccaaacaag aatggtaggc agtggtcaag tcgaaacagg gcttttcggt gccaattctc
     1141 accaacttgt tccaattgaa gattgtatcg tccaacaacc cgttaccatc aaagtaacga
     1201 attttgttcg cgacttacta gaaaaatacg gcgtgccaat ttatgatgaa aaagctggca
     1261 gtggtatcgt ccgaactatc gtcgttcgta ctggcgtgaa aaccggcgaa acacagctcg
     1321 tcttcattac aaatagtaaa aagttaccta aaaaacgcga aatgcttgca gaaatcgaag
     1381 cagctcttcc ggaagtcact tcgattatgc aaaacgtgaa tcaagcaaaa tcctcactta
     1441 ttttcggtga cgaaacgttc cttttagcag gaaaagaaag cattgaagag aaattaatgg
     1501 aactagaatt cgatctatct gctcgtgcct ttttccaatt aaacccgttc caaacagagc
     1561 gactttatca agaagtcgaa aaagcactcg tactaacagg cagtgaaaca ctagtagatg
     1621 cttattgcgg tgttggaaca atcggccaag cttttgccgg aaaagtaaaa gaagttcgtg
     1681 gtatggatat tattccagaa tccattgaag acgctaaacg aaacgccgag aagaatggca
     1741 tcgaaaatgt ttattatgaa gttgggaaag cagaagacgt attaccaaaa tgggtaaatg
     1801 aaggtttccg cccagacgca gtcatcgttg acccaccaag aagcggctgt gaccaaggcc
     1861 taataaaatc attactagat gtggaagcaa aacaacttgt ttatgtatcc tgtaatccat
     1921 ccacattagc acgtgactta gctttactcg cgaagaaata tcgcattcgc tatatgcaac
     1981 ccgtcgatat gttcccgcaa acagctcacg tggaaaccgt agtactcttg cagttaaaag
     2041 ataaataaag gactggtggt acatgatttc aggattaagc catatcactt taattgtgaa
     2101 agatttgaat aaaacaactg ctttcttaca gaatattttt aatgcagaag aaatctattc
     2161 tagtggcgac aaaacatttt cgctttccaa agaaaaattt tttctaatag ctggtttgtg
     2221 gatttgcatt atggaaggag attctttaca agagcgaact tacaatcata ttgctttcca
     2281 aattcaatcc gaggaagtgg atgaatatac tgagcggatt aaagctctcg gtgtggaaat
     2341 gaaaccagaa cgtcccagag tccaaggtga aggacgttcc atttattttt atgattttga
     2401 taatcatctg tttgaattac acgctggtac attagaagaa cgcttaaaaa ggtatcacga
     2461 atagaaataa cacctaatag gaggaaacaa acatgaaaaa actatttgat gaaacgaatg
     2521 aatttgaagc aaagtactac cgaactattt ggtacggcta catcgacaat gaattcgcgc
     2581 cagaattaag tgatgaaata aaacaactca ttcaaagcga ccttacagaa aaaacagcaa
     2641 atccaatcga agcaactcac tgggtttttt atagcgaaac ccaagcaggg gacgcaattg
     2701 gtgataaagt ccgctcttcc attatggttc gccaccggga taataagttt gtcgtccatt
     2761 acaacgtgag cgatttccaa tttgttactg tatttgatgt ggcaaccgcc tttaaagacc
     2821 aattagaaca agcattgaat gcgtaaataa aaaatcccgt ctatttttat agacgggatt
     2881 ttcgttcatc caagttcttt ccagtgccaa ttaccaatat gtaaaccttg gttcatttca
     2941 ctagatgtaa aactatcggc tctagcttct gtttttgctc gtgttaatga agtcgcactt
     3001 ccaaaactat ttgcggtttc ataatggtat tcttggttgt tcaaacggat aataatggca
     3061 cgaccagaag gatgttttcc aataagtttc aaggtttctt cgctcctttt ttcagtcggt
     3121 taaatcattt ttgtgaaagc accggcattt tgatccaagg cagtagaggc agattcaatt
     3181 tggctaaagt cttctaaaga taaaataagc acttcttggc tttcctcgac ttttgcttcg
     3241 acacgttccg taccacttga gatagtatta atttcttgcg tgataccgtt gacacttttt
     3301 tccacttctt taattgcttc ttctacacga ctcgaaagtt tacgaacttc ttccgctaca
     3361 acactaaatc cacgtccggc gtcaccagca cgtgctgcct caatcgct
//
LOCUS       DASDYK010000308         3351 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.guided.182, whole genome shotgun sequence.
ACCESSION   DASDYK010000308 DASDYK010000000
VERSION     DASDYK010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3351
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.guided.182"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            67..630
                     /locus_tag="U0308_003127"
     CDS             67..630
                     /locus_tag="U0308_003127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002078386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HEM2318063.1"
                     /translation="MEVIMSISKHANKKKNILIAASEIVKEEGVVKLTLEAVAQRAGV
                     SKGGLLYHFPSKEALIKGMVEDWINNYFECINTLVNNDDDNAIGKWNRAYLKSTFSDL
                     ENNNLNSALMAAMFINPDLLDEFRQRYDILHTKLITDGIDPVKITITRLSIDGLWFSE
                     IFGMAPLNEELKTQVFDELINMIQEDE"
     gene            630..1007
                     /gene="qacH"
                     /locus_tag="U0308_003128"
     CDS             630..1007
                     /gene="qacH"
                     /locus_tag="U0308_003128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000121134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound efflux SMR
                     transporter QacH"
                     /protein_id="HEM2318064.1"
                     /translation="MSYLYLALAIVGEIIGSSLLKASEGFSKLYPTIGVIIAFVGCFF
                     FLSLSLKTIPLNTAYALWAGLGLVLTTVISVLVWKEKLNMASIAGITLILVGVVILNL
                     FGPGHGESGHEASETITMNETME"
     gene            complement(1202..2146)
                     /locus_tag="U0308_003129"
     CDS             complement(1202..2146)
                     /locus_tag="U0308_003129"
                     /inference="COORDINATES: protein motif:HMM:NF013540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2318065.1"
                     /translation="MVNKFGSELKNIRKTLGISQRELSNDGIIVSKSSLQRIENDKQT
                     PSVDIASLLLQRLDISSPEMEYRLNNFSLSEKEKLINEFREIGSSANVAGINSLLIKM
                     KNFLQSNYSAYISNLILILESLTLFQEEQSFENARKIVTPIWQSLEKRDEWLYKDILL
                     ISNIIYMFDGETFLNMKNRLLFFINKYYHLGTVKKLYIITLLNSVLYMKKNNRFLEAE
                     EDLNIALKKAKEQNEHIRYLDALSLKAELLWLKGEKEFAIKIAKESFIKLYCLEQFDI
                     LEDNIKDWEKLTNVKVDTFLKPLTGVASGKCGFTTVSI"
     gene            2873..>3351
                     /locus_tag="U0308_003130"
     CDS             2873..>3351
                     /locus_tag="U0308_003130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2318066.1"
                     /translation="MLTVQLEGETRIQKLQSDQEKLATLLNDVEDDNTRQLLSMILKE
                     VKQEKIIEETEVKIKEIQLRLNETKEIAYQNDYKARITYLKDQLYELKRNKLAHVAEA
                     EGRFRAQLAHLDHLDFVQQQSKREKEHLRVIGIMPNVPRRQYNRKKYKEKPDYSKIIS
                     "
BASE COUNT         1173 a          490 c          574 g         1114 t
ORIGIN      
        1 ttaaataaga gctttaattc gattgacaaa aaaccgtcca gacggtatat tatatgtatc
       61 taagttatgg aggttattat gtctatttca aagcatgcta ataagaaaaa aaatatattg
      121 attgctgcat ctgaaattgt aaaagaagaa ggagttgtca aactcacatt agaggcagtc
      181 gcccaaagag ctggcgtgag taaaggtgga ttattatacc attttcctag caaggaagca
      241 ttaattaaag gaatggtgga agattggata aataattatt tcgaatgcat taatacgtta
      301 gttaataacg acgatgataa cgcaatagga aaatggaata gggcttatct taaatctaca
      361 ttttccgatt tagaaaacaa taatctaaat tccgcactaa tggctgctat gtttattaat
      421 ccagatttat tagatgaatt ccggcagaga tacgatattt tgcatacaaa gttaataact
      481 gatggaattg atcctgtcaa aataacaatt acaagattat ccatagatgg tctttggttt
      541 tcagaaatat ttggaatggc accattaaat gaagaactaa aaacacaagt ttttgatgaa
      601 ctaataaaca tgattcagga ggacgaataa tgtcatatct atatttagca cttgcaatag
      661 tgggggagat tattggctct tccctattaa aagcatctga aggcttttca aaactctatc
      721 ctacaatagg ggtaataata gctttcgttg gttgtttttt ctttttatcc ttgtcgctaa
      781 aaacaatccc cttaaacact gcatatgcat tatgggcagg tttaggactt gttttgacta
      841 cagtaatttc agttttagtt tggaaggaaa aacttaacat ggctagcatt gcaggaataa
      901 cactgattct tgtaggagtt gtaatattga atttgtttgg accaggacat ggagaatctg
      961 gtcatgaagc aagcgaaact attacaatga atgagacaat ggaataacac ataaaaaagt
     1021 ccttcttaat aaagagaagg actttttagc ttaattaagg gtattttttg aagtccttat
     1081 tcaacaaacc tgcgtacgtt agtttaagtg tatcacttca caattccaat agagtagagt
     1141 ttattgagac ataatgaaat tagcgtttta aatgacttct gactgtctca taagacttgt
     1201 atcaaatgct taccgttgta aatccgcatt tccctgacgc tacccctgta agtggtttta
     1261 aaaatgtatc aacctttaca tttgttaatt tttcccagtc ttttatatta tcttctaaaa
     1321 tatcaaattg ttctaaacaa tataatttaa taaaagactc ttttgcaatt tttatagcaa
     1381 attctttctc accttttaac caaagcagct ctgctttaag tgataatgca tctaagtatc
     1441 tgatatgttc attttgttct ttggcttttt ttagagcaat attgagatct tcttcagctt
     1501 ccaagaagcg attatttttt ttcatgtaaa ggacactgtt taaaagtgtg ataatataca
     1561 gtttttttac ggttcctaaa tggtaatatt tgttaataaa aaacaaaaga cggtttttca
     1621 tattaagaaa ggtctctcca tcgaacatat atataatatt tgatatgaga agaatatctt
     1681 tatataacca ttcatcacgt ttctctaaag attgccaaat gggtgtaact atttttctgg
     1741 cattttcgaa agactgttct tcttggaata aagttaagga ttccagtatt aaaataagat
     1801 tcgaaatata agcactataa tttgattgta agaaattctt cattttgatt aataatgaat
     1861 ttataccagc gacatttgca gaagatccaa tttctctaaa ttcgttaatt agtttttctt
     1921 tttcactcaa tgaaaaatta ttcagtctat attccatttc gggactactt atatctaatc
     1981 gctgtagtaa caaacttgct atatctacag atggagtttg tttgtcattt tcgattcgtt
     2041 gtaaactaga cttagaaaca attataccat cattagataa ttcacgttgg cttatgccta
     2101 atgttttcct aatattcttt aattcagatc cgaatttatt taccatcctt ctctaccttt
     2161 ctaaaatttt tgtaccggat atggtgcttt ttctcaatct taataatgtg tatgctagaa
     2221 tccatataag gaggtgcata aaaaatgttt ttaactttag cagtagttag tgtaattgta
     2281 acagtcttgt cacatggtca agtaggaggc tgaaataaga gaaaggacag caatggtgtg
     2341 agggtcatta ctatcctaac aattatactt aaaaaagaaa tctgcttgaa ggactaaagg
     2401 cattttactc taaagtacag taaaatgttc aaaaatttag acataaaata aaaaagaatg
     2461 atttaaaaca ttctaaaaaa tgatttgaca acgtaatcgc aatgatgtat agtcaaagcg
     2521 aattcagttg agacaaaaaa attaataggc gaagcacaca aagtagattt acttggcggt
     2581 taatctgcaa tgtgctagga aggttaattc cttcctcacc aacacattta caaaccttag
     2641 tgttggcgcc tcaccgtttg ttattgtatc acttttagag ttacaatgct atagagaacg
     2701 tacgtccttt gtgattttta catagaaatc aaaaggtcaa aaggattgct tttcctgtac
     2761 tttctatacc taaactcttg aattggtaat taataattgg tgagcgctcc ccactttggt
     2821 ggggggcgct ttttttgttt cactggattt tgaaactaag ggagggaatt agatgcttac
     2881 tgttcagtta gagggggaaa ctagaattca gaaattgcaa tctgatcagg agaaacttgc
     2941 tacgttatta aatgatgttg aagatgataa cacaagacaa ttactatcaa tgatactaaa
     3001 agaagtaaaa caagaaaaaa taatcgaaga aactgaagtt aagattaaag aaatacagtt
     3061 gcgtttaaac gaaacaaaag aaattgcgta ccaaaatgat tacaaagcgc gaattactta
     3121 cttaaaagat caattatacg aattaaaacg aaataagtta gctcatgttg ctgaagcaga
     3181 ggggaggttt agagcgcaat tagctcatct agatcattta gattttgtac agcaacagtc
     3241 taagcgtgaa aaggagcatt taagagtaat tggtattatg ccaaatgttc caagaagaca
     3301 atacaatcga aaaaaatata aagaaaaacc agattatagt aagattattt c
//
LOCUS       DASDYK010000309         1987 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00087940-LMO
            SAMN38563174-rid20481533.guided.223, whole genome shotgun sequence.
ACCESSION   DASDYK010000309 DASDYK010000000
VERSION     DASDYK010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563174
            Sequence Read Archive: SRR27013242
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014423.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014423.1
            Genome Coverage       :: 135x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 12:20:04
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,132
            CDSs (total)                      :: 3,070
            Genes (coding)                    :: 3,050
            CDSs (with protein)               :: 3,050
            Genes (RNA)                       :: 62
            rRNAs                             :: 1, 3 (16S, 23S)
            complete rRNAs                    :: 1 (16S)
            partial rRNAs                     :: 3 (23S)
            tRNAs                             :: 54
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 20
            CDSs (without protein)            :: 20
            Pseudo Genes (ambiguous residues) :: 0 of 20
            Pseudo Genes (frameshifted)       :: 10 of 20
            Pseudo Genes (incomplete)         :: 7 of 20
            Pseudo Genes (internal stop)      :: 5 of 20
            Pseudo Genes (multiple problems)  :: 2 of 20
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563174-rid20481533.guided.223"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00087940-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Western Cape"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            113..1684
                     /gene="abc-f"
                     /locus_tag="U0308_003131"
     CDS             113..1684
                     /gene="abc-f"
                     /locus_tag="U0308_003131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein"
                     /protein_id="HEM2318067.1"
                     /translation="MSTIEINQLKIEVADRVLVEIPHLLVSKKARIGIIGQNGLGKTT
                     LMEVIAGAKEATSGTVTTQGKLAYIKQLSTDTSTKSGGEKTRKAIQHAMRQNPSVLLA
                     DEPTSNLDVESVKHLERQWSDFHGALIIISHDRTFLDALCTEIWEIKNQKIHVYKGNY
                     HAYLEQKQQQENQAELVYKEFKNKKQQLQASQTHHEIEAGRIVKPGKRLNNKEASAFK
                     AGKGTQQKKQHSTIKALEKRIERLGNVEKPHTTKPIKMITPDNRVIKKGNTILSVKET
                     TYEIAGRKLFETKAFSIKAGDKVALIGENASGKTTFLKEIIQENPNLLCNPQAKIAYF
                     DQELNGLNQTKSLLENISEISVQTKQVNREVLGSMHFKESDLHKEVRMLSGGERVKLL
                     LSMLLVSDANFLILDEPTNYLDIYAMEALETLIKQFAGTVLFVSHDRTFVNHVAEQLL
                     VIENNEMTFHRMTFAEYEESKAPSRITEEDKLILEMRMSEIAAKLMQPNLKPTEKAML
                     EQDYQEIITKRQQFS"
     gene            1806..>1987
                     /locus_tag="U0308_003132"
     CDS             1806..>1987
                     /locus_tag="U0308_003132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEM2318068.1"
                     /translation="MFSHLPDSFLQMNTIFISILIEALPFVLIGVFIAGFIQMFISEQ
                     FIARVIPKNKFLAVIVG"
BASE COUNT          741 a          386 c          365 g          495 t
ORIGIN      
        1 tttttcggac gggattcgta tgttcatttc gcatgataac tctttgctac aggccttttt
       61 ttggcgtagc ctcgcggatt cctctctgaa aatattcagg aggttatttt ttatgtctac
      121 aatcgaaata aatcaattaa aaatagaagt agcagataga gttttagtag aaattcctca
      181 tctgctagtt agtaaaaaag caagaatcgg catcatcggt caaaatggtc taggaaaaac
      241 aacgctaatg gaagtgattg ctggcgctaa agaagcaaca tctggcacgg tgactaccca
      301 aggaaaactt gcttacatca aacaactttc cactgataca agtacgaaaa gcggcggcga
      361 aaaaacaaga aaagcaattc aacatgcgat gcgccaaaac ccaagtgttc tcctagcaga
      421 tgaaccgaca agcaacctcg atgtcgaaag cgtcaaacat ttagaacgtc agtggagcga
      481 tttccacggt gcgctcataa ttatatcgca tgaccgtacc tttttagatg cactttgtac
      541 agaaatatgg gaaatcaaaa accaaaaaat tcacgtatac aaaggaaact accacgcgta
      601 tttagaacaa aaacaacaac aagaaaacca agcggaactc gtatacaaag aatttaaaaa
      661 caaaaagcaa caactacaag cctcccaaac acaccatgaa atcgaagcag gtcgcattgt
      721 caaacctgga aaacgcctaa acaacaaaga agccagcgcg tttaaagccg gaaaaggcac
      781 acaacaaaag aaacaacaca gtaccatcaa agctttagaa aaacgaattg aacggctcgg
      841 caatgtcgaa aaaccacata caactaaacc aatcaaaatg atcaccccag acaatcgcgt
      901 cataaaaaaa ggtaatacga tactaagtgt caaagaaaca acctacgaga tcgcaggacg
      961 aaaactattt gaaacaaaag ctttttctat taaagcaggg gataaagtgg cgctaatcgg
     1021 tgaaaatgcg agcgggaaaa ctacattttt aaaagaaata atccaagaaa atcctaatct
     1081 cctatgtaat ccccaagcga aaattgctta tttcgaccaa gaattgaatg gattaaacca
     1141 aacgaaatcc ctgttagaaa acatctcgga aattagcgtt caaaccaagc aagtaaacag
     1201 agaagtacta ggtagcatgc attttaaaga aagcgatttg cataaggaag tgcgcatgct
     1261 ctctggcggg gaacgagtga agttgctgct cagtatgctc ctcgttagtg acgccaattt
     1321 cttgattctt gatgaaccaa ccaactattt ggatatctat gcaatggaag cgctggaaac
     1381 gttaatcaaa caatttgcgg ggacagtact attcgtttcg catgatagaa cttttgttaa
     1441 ccacgtggca gaacaattac tcgtcatcga aaataatgaa atgactttcc accggatgac
     1501 tttcgcggaa tatgaagaaa gtaaagcgcc aagtcgcatc acagaagaag ataagttgat
     1561 tttagaaatg cgcatgtcag aaattgcagc caagcttatg caaccgaatt taaagcccac
     1621 agaaaaagcc atgctcgaac aagattatca agaaattatc acaaaaagac aacaatttag
     1681 ttaaattgtt gtctttttat tcaagctaaa taaaaaatat agtcatttat attttacttg
     1741 atttctgcaa aagataggct tagaatcaaa tagttattaa aaagagtaaa gaaagaagga
     1801 atcccatgtt tagtcatctt ccggattcat tcctccaaat gaataccatt tttatttcta
     1861 ttttgattga ggcactgccg tttgtattaa ttggagtatt tattgctggc tttattcaaa
     1921 tgtttatatc agaacaattt attgcccgtg ttatccccaa aaataaattt ctagcagtca
     1981 ttgttgg
//
